Query psy2376
Match_columns 896
No_of_seqs 614 out of 3739
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 23:24:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tka_A Ribosomal RNA small sub 100.0 1.8E-96 6E-101 785.8 26.0 273 389-664 43-320 (347)
2 1wg8_A Predicted S-adenosylmet 100.0 2.5E-86 8.6E-91 694.9 25.5 240 390-637 9-248 (285)
3 1m6y_A S-adenosyl-methyltransf 100.0 1.9E-65 6.5E-70 555.8 25.9 241 390-637 13-260 (301)
4 2fyw_A Conserved hypothetical 100.0 3.6E-54 1.2E-58 459.4 17.5 223 664-894 9-239 (267)
5 1nmo_A Hypothetical protein YB 100.0 6.5E-54 2.2E-58 451.8 18.1 219 665-894 8-228 (247)
6 2nyd_A UPF0135 protein SA1388; 100.0 9E-54 3.1E-58 470.7 18.0 227 659-894 7-342 (370)
7 2yyb_A Hypothetical protein TT 100.0 6.5E-54 2.2E-58 450.0 15.2 214 665-894 8-223 (242)
8 2gx8_A NIF3-related protein; s 100.0 1.5E-53 5E-58 471.7 16.8 230 657-894 29-369 (397)
9 3rxy_A NIF3 protein; structura 100.0 6.2E-31 2.1E-35 267.3 10.4 202 666-894 15-263 (278)
10 3mkt_A Multi antimicrobial ext 99.9 3.8E-24 1.3E-28 247.2 19.7 277 2-288 13-319 (460)
11 3mkt_A Multi antimicrobial ext 98.8 9.3E-08 3.2E-12 109.6 18.8 160 1-168 238-397 (460)
12 3eey_A Putative rRNA methylase 98.6 6.4E-08 2.2E-12 97.8 9.7 77 406-486 22-103 (197)
13 3mti_A RRNA methylase; SAM-dep 98.4 1.2E-06 4.1E-11 87.4 10.1 74 406-486 22-99 (185)
14 3m4x_A NOL1/NOP2/SUN family pr 98.1 3.1E-05 1E-09 88.2 14.8 79 406-488 105-187 (456)
15 3duw_A OMT, O-methyltransferas 98.0 3.5E-05 1.2E-09 79.1 12.5 79 406-484 58-141 (223)
16 3mb5_A SAM-dependent methyltra 97.9 3.8E-05 1.3E-09 80.6 11.9 81 395-484 85-170 (255)
17 2frx_A Hypothetical protein YE 97.9 6.6E-05 2.2E-09 86.3 13.9 80 406-489 117-200 (479)
18 1dus_A MJ0882; hypothetical pr 97.9 8.7E-05 3E-09 73.7 12.8 81 392-484 41-127 (194)
19 3e05_A Precorrin-6Y C5,15-meth 97.8 8.3E-05 2.8E-09 75.2 11.1 82 393-483 30-115 (204)
20 2b9e_A NOL1/NOP2/SUN domain fa 97.8 3.4E-05 1.1E-09 83.6 7.6 82 406-489 102-187 (309)
21 1sqg_A SUN protein, FMU protei 97.7 0.00022 7.5E-09 81.1 14.5 81 406-490 246-329 (429)
22 2yxl_A PH0851 protein, 450AA l 97.7 7.3E-05 2.5E-09 85.5 10.5 81 406-489 259-343 (450)
23 3hm2_A Precorrin-6Y C5,15-meth 97.7 0.00023 7.7E-09 69.9 12.0 82 392-482 14-100 (178)
24 1ej0_A FTSJ; methyltransferase 97.6 0.0005 1.7E-08 66.9 12.5 74 406-486 22-98 (180)
25 1o54_A SAM-dependent O-methylt 97.6 0.00035 1.2E-08 74.3 12.0 80 395-483 104-188 (277)
26 2frn_A Hypothetical protein PH 97.6 0.00012 4E-09 78.2 8.2 70 406-483 125-199 (278)
27 2gpy_A O-methyltransferase; st 97.6 0.00028 9.6E-09 72.9 10.8 77 406-485 54-135 (233)
28 3dtn_A Putative methyltransfer 97.5 0.00027 9.1E-09 72.9 9.7 83 393-484 33-117 (234)
29 1l3i_A Precorrin-6Y methyltran 97.5 0.00076 2.6E-08 66.6 12.4 70 406-483 33-107 (192)
30 3dou_A Ribosomal RNA large sub 97.5 0.0015 5.2E-08 65.4 14.4 69 406-484 25-99 (191)
31 2r6z_A UPF0341 protein in RSP 97.5 0.00015 5.2E-09 76.4 7.1 77 406-486 83-171 (258)
32 3grz_A L11 mtase, ribosomal pr 97.4 0.00044 1.5E-08 69.7 10.2 70 406-484 60-133 (205)
33 4df3_A Fibrillarin-like rRNA/T 97.4 0.00026 9.1E-09 73.0 8.1 84 396-484 70-155 (233)
34 1yb2_A Hypothetical protein TA 97.4 0.00072 2.5E-08 71.8 11.9 81 394-483 101-186 (275)
35 1jsx_A Glucose-inhibited divis 97.4 0.00038 1.3E-08 70.2 9.2 84 392-482 51-138 (207)
36 3evz_A Methyltransferase; NYSG 97.4 0.00055 1.9E-08 70.4 10.5 72 406-483 55-130 (230)
37 1i1n_A Protein-L-isoaspartate 97.4 0.00024 8.2E-09 72.9 7.3 87 394-486 66-161 (226)
38 1o9g_A RRNA methyltransferase; 97.3 0.00058 2E-08 71.3 10.0 44 406-450 51-96 (250)
39 2oyr_A UPF0341 protein YHIQ; a 97.3 9.5E-05 3.2E-09 77.7 3.5 85 392-486 75-174 (258)
40 3tr6_A O-methyltransferase; ce 97.3 0.00064 2.2E-08 69.6 9.4 80 406-485 64-149 (225)
41 3hnr_A Probable methyltransfer 97.3 0.0012 4.2E-08 67.1 11.2 79 393-483 35-113 (220)
42 2as0_A Hypothetical protein PH 97.3 0.0031 1.1E-07 70.7 15.4 75 406-483 217-296 (396)
43 4dmg_A Putative uncharacterize 97.2 0.0029 9.9E-08 70.7 14.4 69 406-483 214-287 (393)
44 2plw_A Ribosomal RNA methyltra 97.2 0.0033 1.1E-07 62.9 13.4 52 406-464 22-74 (201)
45 3ajd_A Putative methyltransfer 97.1 0.0012 4.1E-08 70.1 9.7 83 406-489 83-169 (274)
46 4fzv_A Putative methyltransfer 97.1 0.0014 4.9E-08 72.0 10.4 79 405-488 147-235 (359)
47 1ixk_A Methyltransferase; open 97.1 0.00093 3.2E-08 72.5 8.7 79 406-489 118-200 (315)
48 3u81_A Catechol O-methyltransf 97.1 0.00065 2.2E-08 69.5 6.9 78 407-484 59-142 (221)
49 1xdz_A Methyltransferase GIDB; 97.1 0.00096 3.3E-08 69.2 8.2 74 406-482 70-147 (240)
50 3id6_C Fibrillarin-like rRNA/T 97.1 0.0013 4.5E-08 67.8 8.9 76 405-484 75-154 (232)
51 3r3h_A O-methyltransferase, SA 97.1 0.00045 1.5E-08 72.1 5.5 77 407-483 61-143 (242)
52 3c3y_A Pfomt, O-methyltransfer 97.0 0.0018 6.2E-08 67.1 9.9 77 407-483 71-154 (237)
53 3m6w_A RRNA methylase; rRNA me 97.0 0.0013 4.4E-08 74.9 9.4 79 406-488 101-182 (464)
54 2esr_A Methyltransferase; stru 97.0 0.0013 4.4E-08 64.5 8.2 85 391-483 18-107 (177)
55 1g8a_A Fibrillarin-like PRE-rR 97.0 0.0016 5.4E-08 66.8 9.2 77 406-484 73-151 (227)
56 2b25_A Hypothetical protein; s 97.0 0.00093 3.2E-08 73.2 7.9 86 393-484 95-195 (336)
57 3tfw_A Putative O-methyltransf 97.0 0.00098 3.3E-08 69.7 7.7 76 406-484 63-144 (248)
58 3p9n_A Possible methyltransfer 97.0 0.0016 5.5E-08 64.7 8.4 73 406-483 44-120 (189)
59 2nyu_A Putative ribosomal RNA 97.0 0.011 3.6E-07 58.8 14.5 71 406-483 22-104 (196)
60 2fca_A TRNA (guanine-N(7)-)-me 97.0 0.0021 7.2E-08 65.4 9.3 74 406-483 38-115 (213)
61 3ntv_A MW1564 protein; rossman 96.9 0.0015 5.3E-08 67.3 8.3 74 406-484 71-150 (232)
62 2fhp_A Methylase, putative; al 96.9 0.0024 8.3E-08 62.9 9.4 75 406-483 44-123 (187)
63 2pwy_A TRNA (adenine-N(1)-)-me 96.9 0.0035 1.2E-07 65.4 10.2 83 394-484 87-174 (258)
64 1yzh_A TRNA (guanine-N(7)-)-me 96.8 0.0014 4.9E-08 66.5 6.8 74 406-483 41-118 (214)
65 3dr5_A Putative O-methyltransf 96.8 0.0017 5.6E-08 66.7 7.3 75 407-484 57-137 (221)
66 3m70_A Tellurite resistance pr 96.8 0.0032 1.1E-07 66.9 9.8 82 391-484 108-192 (286)
67 2hnk_A SAM-dependent O-methylt 96.8 0.0033 1.1E-07 65.0 9.5 79 406-484 60-155 (239)
68 3opn_A Putative hemolysin; str 96.8 0.0021 7.1E-08 66.5 7.7 90 392-488 25-115 (232)
69 2f8l_A Hypothetical protein LM 96.8 0.0039 1.3E-07 68.4 10.3 73 406-484 130-209 (344)
70 3g89_A Ribosomal RNA small sub 96.8 0.0039 1.3E-07 65.1 9.7 74 406-482 80-157 (249)
71 1i9g_A Hypothetical protein RV 96.8 0.004 1.4E-07 65.9 9.9 84 393-484 89-179 (280)
72 1sui_A Caffeoyl-COA O-methyltr 96.8 0.0029 1E-07 66.0 8.6 77 407-483 80-163 (247)
73 4dzr_A Protein-(glutamine-N5) 96.7 0.0014 4.8E-08 66.1 5.9 87 393-485 19-110 (215)
74 2ozv_A Hypothetical protein AT 96.7 0.0033 1.1E-07 66.1 9.0 77 406-483 36-122 (260)
75 4gek_A TRNA (CMO5U34)-methyltr 96.7 0.0042 1.4E-07 65.4 9.6 72 406-484 70-147 (261)
76 1ne2_A Hypothetical protein TA 96.7 0.0026 9E-08 63.7 7.5 67 406-483 51-117 (200)
77 2h00_A Methyltransferase 10 do 96.7 0.0024 8.2E-08 66.7 7.4 78 406-484 65-148 (254)
78 3njr_A Precorrin-6Y methylase; 96.7 0.0026 8.9E-08 64.3 7.3 80 394-484 46-130 (204)
79 1fbn_A MJ fibrillarin homologu 96.6 0.0039 1.3E-07 64.1 8.5 73 406-481 74-148 (230)
80 3g07_A 7SK snRNA methylphospha 96.6 0.0049 1.7E-07 65.9 9.6 58 391-450 32-89 (292)
81 3lpm_A Putative methyltransfer 96.6 0.002 6.7E-08 67.7 6.3 75 406-485 49-128 (259)
82 1xxl_A YCGJ protein; structura 96.6 0.0031 1.1E-07 65.2 7.7 79 393-482 11-93 (239)
83 2ipx_A RRNA 2'-O-methyltransfe 96.6 0.0051 1.7E-07 63.3 9.2 77 406-484 77-155 (233)
84 1ws6_A Methyltransferase; stru 96.6 0.0047 1.6E-07 59.7 8.5 74 406-483 41-117 (171)
85 1nt2_A Fibrillarin-like PRE-rR 96.6 0.0047 1.6E-07 62.7 8.7 75 406-483 57-133 (210)
86 3cbg_A O-methyltransferase; cy 96.6 0.0052 1.8E-07 63.4 9.2 77 407-483 73-155 (232)
87 2avd_A Catechol-O-methyltransf 96.6 0.0053 1.8E-07 62.8 9.0 77 407-483 70-152 (229)
88 3c3p_A Methyltransferase; NP_9 96.6 0.0024 8.2E-08 64.6 6.3 72 407-483 57-133 (210)
89 3fpf_A Mtnas, putative unchara 96.6 0.0063 2.1E-07 64.8 9.6 72 406-485 122-197 (298)
90 2yxd_A Probable cobalt-precorr 96.6 0.005 1.7E-07 60.1 8.3 80 393-484 25-108 (183)
91 3dxy_A TRNA (guanine-N(7)-)-me 96.6 0.0059 2E-07 62.4 9.0 75 406-484 34-113 (218)
92 3dh0_A SAM dependent methyltra 96.5 0.0061 2.1E-07 61.7 9.0 84 392-483 26-113 (219)
93 1nv8_A HEMK protein; class I a 96.5 0.0054 1.9E-07 65.4 8.5 72 406-483 123-199 (284)
94 3g5t_A Trans-aconitate 3-methy 96.5 0.0065 2.2E-07 65.1 9.1 93 390-484 20-121 (299)
95 3ckk_A TRNA (guanine-N(7)-)-me 96.5 0.0054 1.8E-07 63.5 8.1 74 406-483 46-130 (235)
96 1wy7_A Hypothetical protein PH 96.4 0.0055 1.9E-07 61.6 7.9 69 406-484 49-120 (207)
97 3hem_A Cyclopropane-fatty-acyl 96.4 0.0084 2.9E-07 64.3 9.9 81 391-484 60-145 (302)
98 2ift_A Putative methylase HI07 96.4 0.0024 8.3E-08 64.3 4.9 72 407-483 54-132 (201)
99 2nxc_A L11 mtase, ribosomal pr 96.3 0.016 5.6E-07 60.5 11.0 70 406-484 120-192 (254)
100 3k6r_A Putative transferase PH 96.3 0.0083 2.8E-07 63.6 8.6 76 406-489 125-205 (278)
101 3uwp_A Histone-lysine N-methyl 96.3 0.012 4E-07 65.4 9.8 86 391-483 161-259 (438)
102 3gdh_A Trimethylguanosine synt 96.2 0.0063 2.2E-07 62.8 7.2 72 406-486 78-154 (241)
103 2vdv_E TRNA (guanine-N(7)-)-me 96.2 0.0072 2.5E-07 62.8 7.5 75 406-484 49-136 (246)
104 3ll7_A Putative methyltransfer 96.2 0.006 2E-07 68.1 7.2 71 407-483 94-170 (410)
105 3dlc_A Putative S-adenosyl-L-m 96.2 0.011 3.7E-07 59.5 8.4 81 393-484 34-119 (219)
106 3tma_A Methyltransferase; thum 96.2 0.0045 1.5E-07 68.2 5.8 74 406-484 203-280 (354)
107 2pbf_A Protein-L-isoaspartate 96.2 0.015 5E-07 59.4 9.4 79 406-486 80-172 (227)
108 2bm8_A Cephalosporin hydroxyla 96.1 0.005 1.7E-07 63.7 5.8 77 407-485 82-161 (236)
109 1pjz_A Thiopurine S-methyltran 96.1 0.009 3.1E-07 60.1 7.4 81 392-482 11-107 (203)
110 3uzu_A Ribosomal RNA small sub 96.1 0.0055 1.9E-07 65.1 6.0 72 391-465 30-102 (279)
111 3tqs_A Ribosomal RNA small sub 96.1 0.0083 2.8E-07 62.8 7.2 70 391-466 17-88 (255)
112 1zq9_A Probable dimethyladenos 96.1 0.014 4.6E-07 62.3 9.0 82 391-485 16-102 (285)
113 2yxe_A Protein-L-isoaspartate 96.0 0.012 4.1E-07 59.4 8.0 85 394-486 68-156 (215)
114 2fpo_A Methylase YHHF; structu 96.0 0.0055 1.9E-07 61.7 5.1 71 407-483 55-129 (202)
115 3gru_A Dimethyladenosine trans 96.0 0.011 3.8E-07 63.2 7.7 85 391-486 38-124 (295)
116 3f4k_A Putative methyltransfer 95.9 0.023 7.8E-07 59.0 9.5 83 393-484 35-122 (257)
117 3kkz_A Uncharacterized protein 95.9 0.017 5.7E-07 60.6 8.5 85 392-485 34-123 (267)
118 3a27_A TYW2, uncharacterized p 95.9 0.012 3.9E-07 62.4 7.2 71 406-483 119-193 (272)
119 2h1r_A Dimethyladenosine trans 95.9 0.0068 2.3E-07 65.1 5.5 82 391-485 30-115 (299)
120 3lbf_A Protein-L-isoaspartate 95.9 0.028 9.4E-07 56.5 9.7 83 393-486 67-153 (210)
121 1kpg_A CFA synthase;, cyclopro 95.8 0.021 7E-07 60.6 9.1 81 391-484 52-137 (287)
122 3vc1_A Geranyl diphosphate 2-C 95.8 0.021 7.2E-07 61.5 9.1 81 393-483 106-192 (312)
123 3ujc_A Phosphoethanolamine N-m 95.8 0.026 9E-07 58.7 9.6 83 392-484 44-128 (266)
124 3ou2_A SAM-dependent methyltra 95.8 0.04 1.4E-06 55.4 10.6 82 391-483 33-114 (218)
125 2fk8_A Methoxy mycolic acid sy 95.8 0.022 7.4E-07 61.5 9.0 81 391-484 78-163 (318)
126 1r18_A Protein-L-isoaspartate( 95.7 0.016 5.5E-07 59.2 7.5 89 392-486 71-173 (227)
127 3c0k_A UPF0064 protein YCCW; P 95.7 0.026 8.9E-07 63.1 9.8 75 407-484 221-301 (396)
128 1qam_A ERMC' methyltransferase 95.7 0.018 6.1E-07 59.8 7.7 69 391-465 18-88 (244)
129 3jwg_A HEN1, methyltransferase 95.7 0.01 3.4E-07 60.2 5.6 82 393-483 19-109 (219)
130 2b3t_A Protein methyltransfera 95.7 0.029 9.8E-07 59.3 9.3 71 406-483 109-183 (276)
131 1vbf_A 231AA long hypothetical 95.7 0.028 9.7E-07 57.3 9.0 83 393-486 60-144 (231)
132 3bt7_A TRNA (uracil-5-)-methyl 95.6 0.028 9.7E-07 62.2 9.5 74 407-483 214-302 (369)
133 3giw_A Protein of unknown func 95.6 0.033 1.1E-06 58.6 9.3 79 390-470 64-148 (277)
134 1dl5_A Protein-L-isoaspartate 95.6 0.032 1.1E-06 60.3 9.5 87 392-486 64-154 (317)
135 3jwh_A HEN1; methyltransferase 95.6 0.015 5.2E-07 58.8 6.5 82 393-483 19-109 (217)
136 3tm4_A TRNA (guanine N2-)-meth 95.6 0.015 5E-07 64.6 6.8 74 406-485 217-295 (373)
137 3orh_A Guanidinoacetate N-meth 95.5 0.011 3.6E-07 61.2 5.1 76 406-486 60-138 (236)
138 3bkx_A SAM-dependent methyltra 95.5 0.011 3.7E-07 62.3 5.2 89 392-486 32-132 (275)
139 1nkv_A Hypothetical protein YJ 95.5 0.023 7.9E-07 58.9 7.6 79 393-482 26-109 (256)
140 2p35_A Trans-aconitate 2-methy 95.5 0.02 6.9E-07 59.4 7.1 82 392-484 22-103 (259)
141 3ftd_A Dimethyladenosine trans 95.4 0.013 4.6E-07 61.0 5.5 70 391-465 19-88 (249)
142 4dcm_A Ribosomal RNA large sub 95.4 0.031 1E-06 62.0 8.7 80 395-484 214-300 (375)
143 3bus_A REBM, methyltransferase 95.4 0.039 1.3E-06 57.8 9.1 82 392-483 50-136 (273)
144 2i7c_A Spermidine synthase; tr 95.4 0.026 9E-07 60.0 7.8 73 407-484 79-159 (283)
145 1uwv_A 23S rRNA (uracil-5-)-me 95.3 0.021 7.1E-07 64.7 7.2 83 393-482 276-362 (433)
146 2yx1_A Hypothetical protein MJ 95.3 0.019 6.4E-07 62.8 6.5 67 406-484 195-266 (336)
147 2qe6_A Uncharacterized protein 95.3 0.069 2.4E-06 56.4 10.7 91 390-483 63-164 (274)
148 3ggd_A SAM-dependent methyltra 95.3 0.027 9.1E-07 58.1 7.3 75 406-483 56-131 (245)
149 3bwc_A Spermidine synthase; SA 95.3 0.029 1E-06 60.3 7.8 73 407-483 96-176 (304)
150 4fsd_A Arsenic methyltransfera 95.3 0.023 7.7E-07 63.3 7.1 78 406-483 83-173 (383)
151 1zx0_A Guanidinoacetate N-meth 95.3 0.018 6.1E-07 59.2 5.9 73 406-483 60-135 (236)
152 3g5l_A Putative S-adenosylmeth 95.3 0.05 1.7E-06 56.3 9.3 80 394-483 35-115 (253)
153 1u2z_A Histone-lysine N-methyl 95.3 0.055 1.9E-06 60.9 10.2 82 393-483 232-330 (433)
154 1iy9_A Spermidine synthase; ro 95.3 0.023 7.9E-07 60.1 6.8 73 407-484 76-156 (275)
155 3ege_A Putative methyltransfer 95.2 0.037 1.3E-06 57.8 8.2 82 392-486 23-104 (261)
156 1mjf_A Spermidine synthase; sp 95.2 0.034 1.2E-06 59.0 8.0 71 407-484 76-160 (281)
157 1xj5_A Spermidine synthase 1; 95.2 0.045 1.5E-06 59.6 9.0 74 407-484 121-202 (334)
158 3i9f_A Putative type 11 methyl 95.2 0.036 1.2E-06 53.4 7.4 76 393-483 7-82 (170)
159 1wxx_A TT1595, hypothetical pr 95.2 0.041 1.4E-06 61.2 8.8 73 407-483 210-286 (382)
160 3gu3_A Methyltransferase; alph 95.1 0.025 8.4E-07 60.1 6.6 73 406-484 22-97 (284)
161 3fut_A Dimethyladenosine trans 95.1 0.029 9.9E-07 59.2 7.1 83 391-484 35-118 (271)
162 1vl5_A Unknown conserved prote 95.1 0.037 1.3E-06 57.6 7.8 88 387-485 21-112 (260)
163 3ocj_A Putative exported prote 95.1 0.013 4.3E-07 63.0 4.3 72 406-483 118-194 (305)
164 3hp7_A Hemolysin, putative; st 95.1 0.024 8.2E-07 60.3 6.3 88 393-487 74-162 (291)
165 4htf_A S-adenosylmethionine-de 95.1 0.031 1.1E-06 59.2 7.2 80 393-483 59-143 (285)
166 2o57_A Putative sarcosine dime 95.1 0.049 1.7E-06 57.9 8.8 71 406-483 82-157 (297)
167 1inl_A Spermidine synthase; be 95.1 0.023 7.9E-07 60.8 6.2 73 407-484 91-171 (296)
168 2igt_A SAM dependent methyltra 95.1 0.058 2E-06 58.7 9.5 75 406-484 153-233 (332)
169 3mq2_A 16S rRNA methyltransfer 95.0 0.033 1.1E-06 56.3 6.9 71 391-465 15-93 (218)
170 1ve3_A Hypothetical protein PH 95.0 0.054 1.8E-06 54.8 8.5 69 407-483 39-110 (227)
171 3q87_B N6 adenine specific DNA 95.0 0.026 8.8E-07 55.0 5.7 64 406-484 23-86 (170)
172 2p7i_A Hypothetical protein; p 95.0 0.046 1.6E-06 56.0 7.9 80 393-483 31-110 (250)
173 2b78_A Hypothetical protein SM 94.9 0.055 1.9E-06 60.2 8.9 74 407-483 213-292 (385)
174 3gjy_A Spermidine synthase; AP 94.9 0.075 2.6E-06 57.2 9.6 72 408-483 91-166 (317)
175 3bkw_A MLL3908 protein, S-aden 94.9 0.082 2.8E-06 54.1 9.7 78 395-482 35-113 (243)
176 3p2e_A 16S rRNA methylase; met 94.9 0.032 1.1E-06 57.2 6.4 74 406-484 24-105 (225)
177 1qyr_A KSGA, high level kasuga 94.9 0.081 2.8E-06 55.1 9.6 87 391-485 9-99 (252)
178 3iv6_A Putative Zn-dependent a 94.9 0.019 6.5E-07 60.2 4.7 87 391-486 33-120 (261)
179 1jg1_A PIMT;, protein-L-isoasp 94.9 0.044 1.5E-06 56.3 7.5 84 393-486 81-168 (235)
180 2qm3_A Predicted methyltransfe 94.9 0.028 9.6E-07 62.3 6.3 73 406-484 172-249 (373)
181 2o07_A Spermidine synthase; st 94.9 0.039 1.3E-06 59.3 7.3 73 407-484 96-176 (304)
182 2pt6_A Spermidine synthase; tr 94.8 0.041 1.4E-06 59.6 7.4 73 407-484 117-197 (321)
183 1uir_A Polyamine aminopropyltr 94.8 0.042 1.4E-06 59.4 7.4 73 407-484 78-159 (314)
184 1wzn_A SAM-dependent methyltra 94.8 0.07 2.4E-06 55.1 8.9 78 393-482 31-111 (252)
185 3l8d_A Methyltransferase; stru 94.8 0.082 2.8E-06 54.1 9.4 69 406-482 53-122 (242)
186 1xtp_A LMAJ004091AAA; SGPP, st 94.8 0.067 2.3E-06 55.2 8.6 80 393-482 83-164 (254)
187 2p8j_A S-adenosylmethionine-de 94.7 0.036 1.2E-06 55.4 6.3 84 390-482 9-95 (209)
188 2xvm_A Tellurite resistance pr 94.7 0.056 1.9E-06 53.3 7.7 80 392-483 21-104 (199)
189 2yvl_A TRMI protein, hypotheti 94.7 0.11 3.9E-06 53.2 10.3 71 406-484 91-166 (248)
190 2b2c_A Spermidine synthase; be 94.7 0.049 1.7E-06 58.8 7.6 73 407-484 109-189 (314)
191 3mgg_A Methyltransferase; NYSG 94.7 0.087 3E-06 55.2 9.3 74 406-485 37-114 (276)
192 2pxx_A Uncharacterized protein 94.7 0.071 2.4E-06 53.3 8.3 72 406-484 42-115 (215)
193 2gb4_A Thiopurine S-methyltran 94.7 0.06 2.1E-06 56.1 7.9 69 406-481 68-157 (252)
194 2ih2_A Modification methylase 94.6 0.039 1.3E-06 62.0 6.8 66 407-483 40-105 (421)
195 3m33_A Uncharacterized protein 94.6 0.054 1.8E-06 55.2 7.2 69 406-483 48-118 (226)
196 3sm3_A SAM-dependent methyltra 94.6 0.072 2.5E-06 54.0 8.2 70 406-483 30-108 (235)
197 3e8s_A Putative SAM dependent 94.6 0.05 1.7E-06 54.9 6.9 84 393-485 42-125 (227)
198 3ccf_A Cyclopropane-fatty-acyl 94.5 0.042 1.5E-06 57.9 6.5 83 389-484 43-125 (279)
199 2ex4_A Adrenal gland protein A 94.5 0.049 1.7E-06 56.0 6.8 71 406-483 79-153 (241)
200 3pfg_A N-methyltransferase; N, 94.5 0.041 1.4E-06 57.4 6.2 69 406-484 50-118 (263)
201 3axs_A Probable N(2),N(2)-dime 94.5 0.041 1.4E-06 61.2 6.3 75 406-484 52-133 (392)
202 3e23_A Uncharacterized protein 94.4 0.054 1.8E-06 54.3 6.7 67 406-483 43-109 (211)
203 3bgv_A MRNA CAP guanine-N7 met 94.4 0.029 1E-06 60.3 5.0 90 391-484 20-122 (313)
204 4hg2_A Methyltransferase type 94.4 0.071 2.4E-06 55.7 7.8 81 391-482 25-105 (257)
205 3ofk_A Nodulation protein S; N 94.4 0.075 2.5E-06 53.4 7.7 69 406-483 51-121 (216)
206 3g2m_A PCZA361.24; SAM-depende 94.3 0.026 8.8E-07 60.3 4.3 77 393-482 73-156 (299)
207 3kr9_A SAM-dependent methyltra 94.2 0.077 2.6E-06 54.2 7.3 70 406-482 15-90 (225)
208 3lec_A NADB-rossmann superfami 94.2 0.083 2.8E-06 54.1 7.4 56 406-462 21-81 (230)
209 3cgg_A SAM-dependent methyltra 94.1 0.097 3.3E-06 51.2 7.7 69 406-483 46-114 (195)
210 3q7e_A Protein arginine N-meth 94.1 0.094 3.2E-06 57.5 8.2 71 406-484 66-141 (349)
211 2yqz_A Hypothetical protein TT 94.0 0.098 3.4E-06 54.2 8.0 71 406-484 39-112 (263)
212 1p91_A Ribosomal RNA large sub 94.0 0.093 3.2E-06 54.8 7.8 70 406-482 85-154 (269)
213 2dul_A N(2),N(2)-dimethylguano 94.0 0.06 2E-06 59.7 6.4 72 407-483 48-138 (378)
214 3adn_A Spermidine synthase; am 94.0 0.044 1.5E-06 58.6 5.2 73 407-484 84-165 (294)
215 2kw5_A SLR1183 protein; struct 94.0 0.12 4E-06 51.4 8.0 68 407-483 31-101 (202)
216 3d2l_A SAM-dependent methyltra 93.9 0.12 4.1E-06 52.8 8.2 69 406-484 33-104 (243)
217 1ri5_A MRNA capping enzyme; me 93.9 0.14 4.9E-06 54.0 9.0 72 406-483 64-140 (298)
218 1yub_A Ermam, rRNA methyltrans 93.9 0.017 5.9E-07 59.9 1.6 71 390-466 16-88 (245)
219 3htx_A HEN1; HEN1, small RNA m 93.8 0.057 1.9E-06 64.7 6.0 82 393-482 711-802 (950)
220 3h2b_A SAM-dependent methyltra 93.7 0.11 3.9E-06 51.4 7.5 68 407-483 42-109 (203)
221 3gnl_A Uncharacterized protein 93.7 0.11 3.8E-06 53.7 7.4 56 406-462 21-81 (244)
222 3ldu_A Putative methylase; str 93.6 0.069 2.4E-06 59.3 6.0 72 406-483 195-308 (385)
223 3thr_A Glycine N-methyltransfe 93.5 0.1 3.5E-06 55.2 7.1 72 406-482 57-136 (293)
224 2fyt_A Protein arginine N-meth 93.4 0.19 6.5E-06 54.8 9.1 71 406-484 64-139 (340)
225 3mcz_A O-methyltransferase; ad 93.4 0.11 3.9E-06 56.6 7.4 81 394-482 169-254 (352)
226 2oxt_A Nucleoside-2'-O-methylt 93.4 0.045 1.5E-06 57.6 3.9 68 406-485 74-149 (265)
227 2cmg_A Spermidine synthase; tr 93.4 0.094 3.2E-06 55.0 6.3 66 407-483 73-146 (262)
228 3lcc_A Putative methyl chlorid 93.4 0.11 3.9E-06 52.9 6.9 68 407-483 67-139 (235)
229 1y8c_A S-adenosylmethionine-de 93.3 0.091 3.1E-06 53.7 6.1 70 406-484 37-109 (246)
230 3bxo_A N,N-dimethyltransferase 93.3 0.11 3.9E-06 52.9 6.7 67 406-482 40-106 (239)
231 2wa2_A Non-structural protein 93.2 0.056 1.9E-06 57.2 4.3 68 406-485 82-157 (276)
232 3v97_A Ribosomal RNA large sub 93.1 0.15 5.2E-06 61.2 8.4 73 406-484 539-617 (703)
233 1x19_A CRTF-related protein; m 93.1 0.22 7.6E-06 54.5 9.2 79 392-482 179-262 (359)
234 2vdw_A Vaccinia virus capping 93.0 0.074 2.5E-06 57.0 5.0 43 406-450 48-90 (302)
235 3r0q_C Probable protein argini 93.0 0.18 6.1E-06 55.8 8.2 70 406-484 63-137 (376)
236 3dmg_A Probable ribosomal RNA 92.8 0.21 7E-06 55.4 8.3 70 406-483 233-305 (381)
237 3dli_A Methyltransferase; PSI- 92.7 0.22 7.5E-06 51.0 7.9 68 406-483 41-108 (240)
238 2pjd_A Ribosomal RNA small sub 92.3 0.11 3.8E-06 56.7 5.3 69 407-483 197-268 (343)
239 1qzz_A RDMB, aclacinomycin-10- 92.3 0.27 9.3E-06 54.0 8.6 69 391-464 170-243 (374)
240 2jjq_A Uncharacterized RNA met 92.3 0.092 3.1E-06 59.2 4.7 68 406-483 290-360 (425)
241 2gs9_A Hypothetical protein TT 92.3 0.24 8.2E-06 49.4 7.4 67 406-483 36-102 (211)
242 3sso_A Methyltransferase; macr 92.2 0.35 1.2E-05 53.5 8.9 70 407-483 217-295 (419)
243 2y1w_A Histone-arginine methyl 92.1 0.34 1.2E-05 52.9 8.9 79 393-483 40-123 (348)
244 3k0b_A Predicted N6-adenine-sp 92.0 0.16 5.4E-06 56.6 6.1 72 406-483 201-314 (393)
245 1g6q_1 HnRNP arginine N-methyl 92.0 0.3 1E-05 52.8 8.3 70 406-483 38-112 (328)
246 3ldg_A Putative uncharacterize 91.9 0.18 6.2E-06 55.9 6.4 72 406-483 194-307 (384)
247 3cc8_A Putative methyltransfer 91.8 0.19 6.4E-06 50.7 6.0 63 391-463 21-83 (230)
248 3gwz_A MMCR; methyltransferase 91.8 0.42 1.5E-05 52.5 9.3 66 393-463 192-262 (369)
249 2p41_A Type II methyltransfera 91.4 0.099 3.4E-06 56.1 3.5 71 406-487 82-159 (305)
250 3i53_A O-methyltransferase; CO 91.2 0.43 1.5E-05 51.5 8.5 55 406-462 169-228 (332)
251 2r3s_A Uncharacterized protein 91.2 0.3 1E-05 52.7 7.1 69 406-482 165-238 (335)
252 2qfm_A Spermine synthase; sper 91.2 0.62 2.1E-05 50.8 9.4 74 407-484 189-275 (364)
253 3dp7_A SAM-dependent methyltra 91.0 0.51 1.7E-05 51.8 8.9 56 407-464 180-240 (363)
254 2avn_A Ubiquinone/menaquinone 91.0 0.35 1.2E-05 50.2 7.2 53 407-464 55-107 (260)
255 3b3j_A Histone-arginine methyl 90.9 0.46 1.6E-05 54.3 8.6 79 393-483 148-231 (480)
256 1tw3_A COMT, carminomycin 4-O- 90.8 0.42 1.4E-05 52.2 7.9 68 391-463 171-243 (360)
257 2okc_A Type I restriction enzy 90.3 0.19 6.6E-06 56.9 4.7 73 406-484 171-261 (445)
258 3rxy_A NIF3 protein; structura 90.0 0.74 2.5E-05 47.3 8.1 127 619-770 131-263 (278)
259 4a6d_A Hydroxyindole O-methylt 90.0 0.96 3.3E-05 49.4 9.9 55 406-462 179-237 (353)
260 3bzb_A Uncharacterized protein 89.5 0.92 3.2E-05 47.7 8.9 43 406-450 79-122 (281)
261 3reo_A (ISO)eugenol O-methyltr 89.4 0.76 2.6E-05 50.5 8.5 66 392-463 191-256 (368)
262 2i62_A Nicotinamide N-methyltr 89.3 0.2 6.9E-06 51.8 3.6 43 406-450 56-98 (265)
263 3p9c_A Caffeic acid O-methyltr 89.0 0.84 2.9E-05 50.1 8.5 65 393-463 190-254 (364)
264 2ip2_A Probable phenazine-spec 88.8 0.53 1.8E-05 50.8 6.6 65 408-481 169-238 (334)
265 2fyw_A Conserved hypothetical 88.4 0.84 2.9E-05 47.8 7.6 80 804-884 3-104 (267)
266 3fzg_A 16S rRNA methylase; met 88.2 0.99 3.4E-05 44.6 7.3 43 407-450 50-92 (200)
267 3lst_A CALO1 methyltransferase 88.0 1.1 3.9E-05 48.5 8.7 78 392-483 173-254 (348)
268 1fp2_A Isoflavone O-methyltran 87.2 0.81 2.8E-05 49.8 6.8 53 406-462 188-240 (352)
269 3v97_A Ribosomal RNA large sub 86.9 0.62 2.1E-05 55.9 6.2 77 406-485 190-314 (703)
270 3p8z_A Mtase, non-structural p 86.3 0.49 1.7E-05 48.0 3.9 87 393-490 68-158 (267)
271 3lkz_A Non-structural protein 85.4 0.6 2E-05 48.9 4.2 85 393-488 84-172 (321)
272 4hc4_A Protein arginine N-meth 85.2 0.83 2.9E-05 50.3 5.6 70 406-484 83-157 (376)
273 1fp1_D Isoliquiritigenin 2'-O- 84.8 1.2 4.1E-05 48.9 6.7 55 406-464 209-263 (372)
274 4e2x_A TCAB9; kijanose, tetron 84.7 1.6 5.6E-05 48.5 7.9 54 391-450 95-148 (416)
275 2ar0_A M.ecoki, type I restric 84.5 1.1 3.6E-05 52.1 6.4 74 406-483 169-268 (541)
276 1vlm_A SAM-dependent methyltra 83.2 1.1 3.9E-05 44.8 5.3 62 407-483 48-109 (219)
277 2xyq_A Putative 2'-O-methyl tr 82.8 0.72 2.4E-05 48.9 3.6 61 406-483 63-130 (290)
278 2nyd_A UPF0135 protein SA1388; 82.6 1.9 6.4E-05 47.2 6.9 82 802-884 3-105 (370)
279 2zig_A TTHA0409, putative modi 80.4 1.7 5.9E-05 46.1 5.6 53 391-450 224-276 (297)
280 1nmo_A Hypothetical protein YB 80.4 3.5 0.00012 42.4 7.8 79 804-884 1-100 (247)
281 2gx8_A NIF3-related protein; s 80.2 2.7 9.3E-05 46.3 7.2 80 803-883 28-129 (397)
282 3lkd_A Type I restriction-modi 80.2 2.1 7.1E-05 49.5 6.6 57 406-462 221-285 (542)
283 1zg3_A Isoflavanone 4'-O-methy 79.5 2.2 7.4E-05 46.5 6.2 65 407-483 194-258 (358)
284 4azs_A Methyltransferase WBDD; 79.4 3.1 0.0001 48.5 7.8 73 407-486 67-143 (569)
285 2aot_A HMT, histamine N-methyl 79.1 4.3 0.00015 42.5 8.3 91 406-498 52-155 (292)
286 3s1s_A Restriction endonucleas 78.8 1.6 5.4E-05 52.3 5.0 42 406-447 321-364 (878)
287 1i4w_A Mitochondrial replicati 78.0 3.7 0.00013 44.6 7.3 77 390-468 39-120 (353)
288 3cvo_A Methyltransferase-like 77.8 3.7 0.00013 40.9 6.7 74 407-484 31-130 (202)
289 2qy6_A UPF0209 protein YFCK; s 77.0 1.8 6E-05 45.0 4.3 36 406-441 60-106 (257)
290 3gcz_A Polyprotein; flavivirus 76.9 2.2 7.6E-05 44.5 4.9 36 406-442 90-125 (282)
291 3ua3_A Protein arginine N-meth 76.8 3.8 0.00013 48.3 7.3 78 407-484 410-503 (745)
292 3frh_A 16S rRNA methylase; met 75.8 8.3 0.00029 39.5 8.7 80 406-497 105-187 (253)
293 3c6k_A Spermine synthase; sper 75.6 8.3 0.00028 42.1 9.2 72 409-484 208-292 (381)
294 2a14_A Indolethylamine N-methy 74.2 1.3 4.5E-05 45.9 2.5 44 405-450 54-97 (263)
295 3o4f_A Spermidine synthase; am 73.6 2.3 8E-05 44.9 4.1 70 409-484 86-165 (294)
296 2g72_A Phenylethanolamine N-me 73.4 2 6.9E-05 45.0 3.7 43 406-450 71-113 (289)
297 2yyb_A Hypothetical protein TT 71.6 3.9 0.00013 41.9 5.2 78 804-884 1-100 (242)
298 3lcv_B Sisomicin-gentamicin re 69.7 4.6 0.00016 41.9 5.1 82 407-497 133-217 (281)
299 1af7_A Chemotaxis receptor met 68.8 5.1 0.00017 41.9 5.5 43 407-449 106-155 (274)
300 1g60_A Adenine-specific methyl 66.8 6.5 0.00022 40.6 5.8 53 391-450 201-253 (260)
301 3khk_A Type I restriction-modi 65.2 2.3 7.8E-05 49.3 2.0 42 408-449 246-301 (544)
302 2wk1_A NOVP; transferase, O-me 61.4 14 0.00049 38.6 7.1 77 407-486 107-219 (282)
303 3evf_A RNA-directed RNA polyme 61.2 12 0.00042 38.8 6.4 36 406-442 74-109 (277)
304 2py6_A Methyltransferase FKBM; 60.8 11 0.00036 41.9 6.4 44 406-449 226-270 (409)
305 3llv_A Exopolyphosphatase-rela 60.7 15 0.00051 33.5 6.5 67 415-485 12-79 (141)
306 3eld_A Methyltransferase; flav 60.4 6.2 0.00021 41.4 4.0 36 406-442 81-116 (300)
307 2zfu_A Nucleomethylin, cerebra 59.9 6.4 0.00022 38.8 4.0 68 393-484 56-123 (215)
308 2px2_A Genome polyprotein [con 57.3 3.2 0.00011 42.7 1.2 71 406-487 73-150 (269)
309 4hg2_A Methyltransferase type 55.5 7.4 0.00025 40.2 3.7 35 602-636 115-154 (257)
310 4auk_A Ribosomal RNA large sub 55.1 17 0.00059 39.5 6.6 75 405-490 210-284 (375)
311 3fwz_A Inner membrane protein 54.9 19 0.00066 32.9 6.2 68 415-486 13-81 (140)
312 2edu_A Kinesin-like protein KI 54.9 2.4 8.1E-05 36.9 -0.2 59 502-566 10-73 (98)
313 3ctl_A D-allulose-6-phosphate 52.4 52 0.0018 33.2 9.3 121 705-859 72-195 (231)
314 3tos_A CALS11; methyltransfera 51.2 63 0.0022 33.1 9.9 80 407-486 70-192 (257)
315 1boo_A Protein (N-4 cytosine-s 50.6 9.4 0.00032 40.8 3.6 43 406-451 252-294 (323)
316 3rd5_A Mypaa.01249.C; ssgcid, 50.2 41 0.0014 34.8 8.6 74 413-488 21-98 (291)
317 2aef_A Calcium-gated potassium 49.0 36 0.0012 34.0 7.7 66 415-485 15-80 (234)
318 1id1_A Putative potassium chan 47.0 27 0.00094 32.3 5.9 70 415-485 9-80 (153)
319 1rdu_A Conserved hypothetical 46.9 14 0.00049 32.7 3.7 44 838-881 48-91 (116)
320 2c7p_A Modification methylase 46.0 32 0.0011 36.8 6.9 71 407-486 11-81 (327)
321 4dzr_A Protein-(glutamine-N5) 46.0 10 0.00035 37.0 2.8 41 596-636 138-178 (215)
322 4gek_A TRNA (CMO5U34)-methyltr 45.9 13 0.00044 38.4 3.7 37 600-636 156-192 (261)
323 2oo3_A Protein involved in cat 45.5 15 0.00053 38.3 4.1 84 392-483 80-166 (283)
324 4gx0_A TRKA domain protein; me 45.5 3.5E+02 0.012 30.6 16.4 65 415-482 133-198 (565)
325 4gqb_A Protein arginine N-meth 45.4 19 0.00066 42.1 5.4 69 407-481 358-433 (637)
326 1g55_A DNA cytosine methyltran 45.2 43 0.0015 35.9 7.9 74 408-485 3-77 (343)
327 3cu2_A Ribulose-5-phosphate 3- 45.1 69 0.0023 32.4 8.9 124 703-861 82-219 (237)
328 1ixk_A Methyltransferase; open 45.0 16 0.00056 38.7 4.5 36 602-637 226-264 (315)
329 2xyq_A Putative 2'-O-methyl tr 44.9 11 0.00038 39.6 3.0 38 600-637 149-186 (290)
330 3g7u_A Cytosine-specific methy 44.3 60 0.002 35.3 8.9 73 409-484 4-79 (376)
331 2re2_A Uncharacterized protein 43.9 25 0.00087 32.3 5.0 40 841-881 68-107 (136)
332 1eg2_A Modification methylase 43.8 46 0.0016 35.3 7.8 42 406-450 242-286 (319)
333 3f9i_A 3-oxoacyl-[acyl-carrier 42.6 68 0.0023 32.0 8.6 79 407-488 14-96 (249)
334 3ajd_A Putative methyltransfer 42.4 12 0.00041 38.8 2.8 38 601-638 190-230 (274)
335 2pxx_A Uncharacterized protein 41.6 14 0.00048 36.0 3.1 28 598-625 135-162 (215)
336 3ufb_A Type I restriction-modi 40.5 20 0.00068 41.2 4.5 44 406-449 217-272 (530)
337 2qrv_A DNA (cytosine-5)-methyl 40.4 1.3E+02 0.0046 31.3 10.6 75 406-484 15-91 (295)
338 1eo1_A Hypothetical protein MT 39.4 45 0.0015 29.8 5.9 43 839-881 52-94 (124)
339 3ggd_A SAM-dependent methyltra 39.1 24 0.00083 35.3 4.5 37 600-636 141-177 (245)
340 2wfb_A Putative uncharacterize 39.1 18 0.00061 32.3 3.1 43 839-881 54-96 (120)
341 2hmt_A YUAA protein; RCK, KTN, 38.6 37 0.0013 30.4 5.3 68 415-486 12-80 (144)
342 2xvm_A Tellurite resistance pr 38.6 11 0.00037 36.4 1.6 29 600-628 114-142 (199)
343 2ld4_A Anamorsin; methyltransf 36.4 17 0.00057 34.5 2.6 60 406-484 12-71 (176)
344 1lnq_A MTHK channels, potassiu 36.2 46 0.0016 35.4 6.3 65 415-484 121-185 (336)
345 2yut_A Putative short-chain ox 35.8 86 0.0029 30.0 7.8 70 414-488 6-78 (207)
346 2k4m_A TR8_protein, UPF0146 pr 35.5 26 0.00088 32.9 3.5 95 389-489 19-127 (153)
347 2kw5_A SLR1183 protein; struct 35.2 25 0.00085 34.0 3.7 29 599-627 108-136 (202)
348 1pjz_A Thiopurine S-methyltran 34.9 22 0.00075 34.8 3.2 25 600-624 118-142 (203)
349 2qm3_A Predicted methyltransfe 34.0 31 0.0011 37.4 4.6 36 601-636 256-296 (373)
350 3ic5_A Putative saccharopine d 33.5 97 0.0033 26.3 7.1 65 416-485 12-78 (118)
351 2duy_A Competence protein come 33.4 9.8 0.00033 31.0 0.3 37 522-567 21-57 (75)
352 3l6e_A Oxidoreductase, short-c 33.3 68 0.0023 31.9 6.8 74 414-487 9-88 (235)
353 2yx6_A Hypothetical protein PH 32.9 47 0.0016 29.5 4.8 37 843-879 54-90 (121)
354 2g72_A Phenylethanolamine N-me 32.5 18 0.00062 37.5 2.3 28 594-621 187-214 (289)
355 3njr_A Precorrin-6Y methylase; 32.2 42 0.0014 32.7 4.8 34 604-637 136-169 (204)
356 2gb4_A Thiopurine S-methyltran 32.2 19 0.00064 36.9 2.2 24 601-624 170-193 (252)
357 3euj_B Chromosome partition pr 31.2 45 0.0015 30.3 4.1 81 503-596 31-114 (152)
358 1vl5_A Unknown conserved prote 31.1 27 0.00091 35.4 3.2 36 601-636 119-154 (260)
359 3lpm_A Putative methyltransfer 31.0 38 0.0013 34.4 4.4 38 598-636 152-189 (259)
360 3iht_A S-adenosyl-L-methionine 30.8 83 0.0028 29.7 6.0 75 407-486 41-116 (174)
361 4dqx_A Probable oxidoreductase 30.5 88 0.003 32.1 7.2 76 413-488 32-113 (277)
362 3zv4_A CIS-2,3-dihydrobiphenyl 30.3 84 0.0029 32.2 7.0 74 413-488 10-91 (281)
363 4e6p_A Probable sorbitol dehyd 30.2 1.1E+02 0.0037 30.8 7.8 75 413-487 13-93 (259)
364 2i5h_A Hypothetical protein AF 30.1 28 0.00095 34.2 2.8 25 543-567 141-165 (205)
365 3fpf_A Mtnas, putative unchara 29.8 32 0.0011 36.3 3.5 28 599-626 199-226 (298)
366 3hem_A Cyclopropane-fatty-acyl 29.7 29 0.001 36.1 3.3 31 599-629 160-190 (302)
367 2a14_A Indolethylamine N-methy 29.2 27 0.00092 35.7 2.9 25 598-622 173-197 (263)
368 3qv2_A 5-cytosine DNA methyltr 29.0 98 0.0034 32.9 7.3 70 408-483 11-83 (327)
369 3ofk_A Nodulation protein S; N 28.9 27 0.00093 34.1 2.8 28 598-625 130-157 (216)
370 3f4w_A Putative hexulose 6 pho 28.8 2.1E+02 0.0073 27.6 9.5 120 705-861 69-189 (211)
371 3uwp_A Histone-lysine N-methyl 28.6 60 0.0021 35.9 5.6 73 600-702 266-338 (438)
372 4h0n_A DNMT2; SAH binding, tra 28.6 1.2E+02 0.0042 32.2 8.1 72 409-484 5-77 (333)
373 1o13_A Probable NIFB protein; 28.5 58 0.002 29.8 4.7 38 843-880 67-104 (136)
374 2i62_A Nicotinamide N-methyltr 28.4 27 0.00091 35.3 2.6 28 595-622 171-198 (265)
375 3sm3_A SAM-dependent methyltra 28.3 29 0.00098 34.2 2.8 26 600-625 119-144 (235)
376 4eso_A Putative oxidoreductase 28.3 91 0.0031 31.4 6.8 75 413-487 13-93 (255)
377 3g07_A 7SK snRNA methylphospha 28.2 31 0.001 36.0 3.1 30 592-621 190-219 (292)
378 2pjd_A Ribosomal RNA small sub 28.2 38 0.0013 36.2 3.9 40 598-637 279-319 (343)
379 4fgs_A Probable dehydrogenase 28.1 1E+02 0.0035 31.8 7.1 78 407-487 29-114 (273)
380 3e9n_A Putative short-chain de 28.0 90 0.0031 31.1 6.6 71 413-487 10-86 (245)
381 3n74_A 3-ketoacyl-(acyl-carrie 27.9 1.1E+02 0.0036 30.8 7.2 75 413-487 14-94 (261)
382 3k6g_A Telomeric repeat-bindin 27.8 31 0.0011 29.6 2.4 28 520-547 67-94 (111)
383 3bgv_A MRNA CAP guanine-N7 met 27.8 40 0.0014 35.3 4.0 34 598-633 131-164 (313)
384 2a4k_A 3-oxoacyl-[acyl carrier 27.6 1.2E+02 0.004 30.8 7.5 75 413-487 11-91 (263)
385 1lss_A TRK system potassium up 27.3 1.1E+02 0.0039 26.8 6.6 67 416-485 11-78 (140)
386 3rwb_A TPLDH, pyridoxal 4-dehy 27.2 99 0.0034 30.9 6.8 75 413-487 11-91 (247)
387 3ou2_A SAM-dependent methyltra 27.2 29 0.00099 33.7 2.6 26 600-625 124-149 (218)
388 3vnd_A TSA, tryptophan synthas 26.9 2.9E+02 0.0098 28.3 10.2 121 704-861 114-237 (267)
389 2aot_A HMT, histamine N-methyl 26.8 28 0.00096 36.1 2.5 25 600-624 150-174 (292)
390 4dyv_A Short-chain dehydrogena 26.7 1.1E+02 0.0038 31.2 7.1 75 413-487 33-113 (272)
391 3c85_A Putative glutathione-re 26.6 90 0.0031 29.5 6.0 66 416-485 46-114 (183)
392 3m6w_A RRNA methylase; rRNA me 26.4 37 0.0013 38.2 3.5 37 602-638 209-248 (464)
393 2ioj_A Hypothetical protein AF 26.3 1.1E+02 0.0039 27.7 6.4 73 804-882 8-84 (139)
394 2g1u_A Hypothetical protein TM 26.1 78 0.0027 29.1 5.3 69 415-486 25-94 (155)
395 3l4b_C TRKA K+ channel protien 26.0 66 0.0023 31.6 5.1 68 415-485 6-74 (218)
396 3e8s_A Putative SAM dependent 25.8 29 0.00098 33.9 2.3 26 600-625 130-155 (227)
397 3ak4_A NADH-dependent quinucli 25.7 1.3E+02 0.0045 30.2 7.5 75 413-487 17-97 (263)
398 1zx0_A Guanidinoacetate N-meth 25.6 18 0.00062 36.2 0.7 28 599-626 147-174 (236)
399 3o38_A Short chain dehydrogena 25.5 1.3E+02 0.0045 30.2 7.4 72 415-488 33-113 (266)
400 3gvc_A Oxidoreductase, probabl 25.3 1.2E+02 0.0042 31.0 7.2 75 413-487 34-114 (277)
401 1yo6_A Putative carbonyl reduc 25.3 84 0.0029 31.0 5.8 76 413-488 8-93 (250)
402 3i9f_A Putative type 11 methyl 25.2 33 0.0011 32.0 2.5 25 601-625 91-115 (170)
403 1ve3_A Hypothetical protein PH 25.2 39 0.0013 33.1 3.2 27 599-625 119-145 (227)
404 3t8y_A CHEB, chemotaxis respon 25.1 44 0.0015 30.9 3.3 69 416-487 10-82 (164)
405 3asu_A Short-chain dehydrogena 25.1 1.1E+02 0.0038 30.6 6.7 74 414-487 6-85 (248)
406 3m1a_A Putative dehydrogenase; 24.9 97 0.0033 31.6 6.3 76 413-488 10-91 (281)
407 4fs3_A Enoyl-[acyl-carrier-pro 24.7 1.6E+02 0.0056 29.6 7.9 69 419-489 19-99 (256)
408 4g65_A TRK system potassium up 24.6 2.4E+02 0.0081 31.4 9.8 88 390-482 219-306 (461)
409 3imf_A Short chain dehydrogena 24.4 1.5E+02 0.0052 29.7 7.6 75 413-487 11-94 (257)
410 2p8j_A S-adenosylmethionine-de 24.3 36 0.0012 32.8 2.7 26 599-624 105-130 (209)
411 3h2b_A SAM-dependent methyltra 24.3 28 0.00096 33.6 1.8 26 600-625 119-144 (203)
412 3imo_A Integron cassette prote 24.3 11 0.00036 33.8 -1.1 45 492-536 87-132 (133)
413 1qop_A Tryptophan synthase alp 24.2 3.8E+02 0.013 27.2 10.7 123 703-861 112-236 (268)
414 3ubt_Y Modification methylase 24.1 92 0.0031 32.8 6.1 64 410-481 3-66 (331)
415 2c07_A 3-oxoacyl-(acyl-carrier 24.0 2.6E+02 0.0088 28.4 9.4 75 413-487 49-132 (285)
416 1hxh_A 3BETA/17BETA-hydroxyste 24.0 1.4E+02 0.0049 29.8 7.3 75 413-487 11-91 (253)
417 3g2m_A PCZA361.24; SAM-depende 23.9 37 0.0013 35.3 2.8 27 599-625 167-193 (299)
418 3dli_A Methyltransferase; PSI- 23.8 41 0.0014 33.5 3.0 25 600-624 118-142 (240)
419 3ajx_A 3-hexulose-6-phosphate 23.8 4.1E+02 0.014 25.3 10.5 43 704-754 68-111 (207)
420 3kzv_A Uncharacterized oxidore 23.7 1.9E+02 0.0066 28.8 8.2 74 414-487 8-89 (254)
421 4fn4_A Short chain dehydrogena 23.7 1.5E+02 0.005 30.2 7.3 73 413-487 12-95 (254)
422 2qe6_A Uncharacterized protein 23.7 35 0.0012 35.2 2.5 30 594-625 170-199 (274)
423 2h6r_A Triosephosphate isomera 23.6 1.7E+02 0.0059 28.9 7.6 115 706-859 75-199 (219)
424 3twe_A Alpha4H; unknown functi 23.5 60 0.0021 20.0 2.4 22 594-615 6-27 (27)
425 3ujc_A Phosphoethanolamine N-m 23.4 38 0.0013 34.1 2.7 28 599-626 136-163 (266)
426 2hwk_A Helicase NSP2; rossman 23.3 62 0.0021 33.6 4.1 34 604-637 236-272 (320)
427 3nkl_A UDP-D-quinovosamine 4-d 23.2 1E+02 0.0036 27.6 5.5 101 415-524 10-125 (141)
428 2fca_A TRNA (guanine-N(7)-)-me 23.0 70 0.0024 31.3 4.5 23 602-624 133-155 (213)
429 3lcc_A Putative methyl chlorid 22.9 30 0.001 34.4 1.8 25 600-624 149-173 (235)
430 1h1y_A D-ribulose-5-phosphate 22.9 1.9E+02 0.0066 28.5 7.9 122 704-860 78-202 (228)
431 3op4_A 3-oxoacyl-[acyl-carrier 22.7 1.4E+02 0.0047 29.8 6.9 75 413-487 14-94 (248)
432 2wsb_A Galactitol dehydrogenas 22.6 1E+02 0.0034 30.7 5.7 76 413-488 16-97 (254)
433 2gs9_A Hypothetical protein TT 22.5 38 0.0013 32.8 2.4 26 600-625 110-135 (211)
434 3e23_A Uncharacterized protein 22.0 44 0.0015 32.4 2.8 24 599-622 118-141 (211)
435 2ld4_A Anamorsin; methyltransf 21.9 32 0.0011 32.4 1.6 20 601-620 80-99 (176)
436 2b3t_A Protein methyltransfera 21.9 58 0.002 33.3 3.8 41 596-637 212-252 (276)
437 3bkw_A MLL3908 protein, S-aden 21.7 40 0.0014 33.4 2.4 26 600-625 122-147 (243)
438 1mxh_A Pteridine reductase 2; 21.6 1.9E+02 0.0065 29.2 7.7 76 413-488 16-106 (276)
439 2zfu_A Nucleomethylin, cerebra 21.4 41 0.0014 32.7 2.4 25 601-625 130-154 (215)
440 4g81_D Putative hexonate dehyd 21.4 1.7E+02 0.0058 29.8 7.1 73 413-487 14-97 (255)
441 1nt2_A Fibrillarin-like PRE-rR 21.4 34 0.0012 33.7 1.8 24 601-624 140-163 (210)
442 3thr_A Glycine N-methyltransfe 20.9 48 0.0016 34.1 2.9 26 599-624 152-177 (293)
443 1tqj_A Ribulose-phosphate 3-ep 20.8 5.2E+02 0.018 25.5 10.6 123 705-860 77-202 (230)
444 1kpg_A CFA synthase;, cyclopro 20.8 46 0.0016 34.2 2.7 29 600-628 146-174 (287)
445 1zem_A Xylitol dehydrogenase; 20.8 2.4E+02 0.0081 28.3 8.2 73 413-487 12-95 (262)
446 2ozv_A Hypothetical protein AT 20.8 65 0.0022 32.8 3.8 24 600-623 148-171 (260)
447 1ri5_A MRNA capping enzyme; me 20.8 50 0.0017 33.9 3.1 28 598-625 150-177 (298)
448 1oaa_A Sepiapterin reductase; 20.5 2.3E+02 0.0079 28.2 8.1 75 413-487 11-103 (259)
449 3t4x_A Oxidoreductase, short c 20.5 1.8E+02 0.0063 29.2 7.3 73 413-487 15-96 (267)
450 1iy8_A Levodione reductase; ox 20.5 1.8E+02 0.0061 29.2 7.2 75 413-487 18-103 (267)
451 3bxo_A N,N-dimethyltransferase 20.5 38 0.0013 33.4 2.0 25 599-623 118-142 (239)
452 2p41_A Type II methyltransfera 20.4 1.3E+02 0.0043 31.6 6.1 23 603-625 172-194 (305)
453 4fgs_A Probable dehydrogenase 20.4 77 0.0026 32.8 4.3 30 832-861 29-62 (273)
454 4df3_A Fibrillarin-like rRNA/T 20.4 48 0.0016 33.5 2.6 29 600-628 160-188 (233)
455 2ex4_A Adrenal gland protein A 20.1 49 0.0017 32.9 2.7 25 600-624 163-187 (241)
No 1
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=100.00 E-value=1.8e-96 Score=785.80 Aligned_cols=273 Identities=49% Similarity=0.816 Sum_probs=244.7
Q ss_pred ccchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHH
Q psy2376 389 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII 468 (896)
Q Consensus 389 ~~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (896)
..|++|+++.|.++ ||++|||||||+||||.+||++++|+|+|||||+||+|++.|+++.++|++++|+||++++++
T Consensus 43 pVLl~Evl~~L~i~---pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 43 TVLLDEAVNGLNIR---PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp CTTTHHHHHHTCCC---TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHH
T ss_pred cccHHHHHHhhCCC---CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHH
Confidence 35999999999986 499999999999999999999999999999999999999999766678999999999999999
Q ss_pred HHhcCCC-cccEEEEecccCccccCCCCCCccCCCCCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHhcCcccHHHHH
Q psy2376 469 LKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIA 547 (896)
Q Consensus 469 l~~~~~~-~~d~il~dlG~ss~q~~~~~rgfs~~~~~~ldmrm~~~~~~~a~~~~~~~~~~~l~~i~~~yg~~~~~~~~a 547 (896)
+++.|+. +||||||||||||||||+++|||||++|||||||||+++++||+||||+|||+||++||++|||||+|+|||
T Consensus 120 L~~~g~~~~vDgILfDLGVSS~QlD~~eRGFSf~~dgPLDMRMd~~~~~tAadvvn~~~e~eLa~Il~~YGEEr~a~rIA 199 (347)
T 3tka_A 120 VAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIA 199 (347)
T ss_dssp HHHTTCTTCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSCTTSSCCHHHHHHHCCHHHHHHHHHHHHCCTTHHHHH
T ss_pred HHhcCCCCcccEEEECCccCHHHhcCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHhhCCHHHHHHHHHHhcCcchHHHHH
Confidence 9999886 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCcchHHHHHHHHhhccCCCCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHhccccCceEEEEeecchh
Q psy2376 548 KEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 627 (896)
Q Consensus 548 ~~i~~~r~~~~~~~t~~l~~~~~~~~~~~~~~~~~~~~~fqalri~vn~el~~l~~~l~~~~~~l~~~g~~~visfhsle 627 (896)
++||++|+++||+||.||+++|++++|++.+++||||||||||||+||+||++|+++|++++++|+|||||+||||||||
T Consensus 200 ~aIv~~R~~~pi~tT~~La~ii~~a~p~~~~~~hpAtrtFQALRI~VN~EL~~L~~~L~~a~~~L~~gGRl~VISFHSLE 279 (347)
T 3tka_A 200 RAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLE 279 (347)
T ss_dssp HHHHHHHHHSCCCBHHHHHHHHHHHSCCC----CTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHEEEEEEEEEEESSHHH
T ss_pred HHHHHHHhcCCCCcHHHHHHHHHHhCCccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecCchh
Confidence 99999999999999999999999999976566799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCccccCC----cccchhhcc
Q psy2376 628 DRIVKNFINFNTKIPHIDRRLPIYNYLF----EPKMKFLAR 664 (896)
Q Consensus 628 dr~vk~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~l~~ 664 (896)
|||||+||+++++.|.||+++|+|.|+. +|.++.+||
T Consensus 280 DRiVK~~f~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~i~k 320 (347)
T 3tka_A 280 DRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGK 320 (347)
T ss_dssp HHHHHHHHHHTTCC-------------------CCEEEEEE
T ss_pred HHHHHHHHHHhccCCCCCccCCccccccccccCcceeeecC
Confidence 9999999999999999999999999977 667887765
No 2
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=100.00 E-value=2.5e-86 Score=694.94 Aligned_cols=240 Identities=40% Similarity=0.653 Sum_probs=229.9
Q ss_pred cchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHH
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l 469 (896)
.|++|+++.|.++ |+++|||||||+||||.+||++ +++|+|||+||+|++.|+++.++|++++|+||+++++++
T Consensus 9 VLl~e~le~L~~~---~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 9 VLYQEALDLLAVR---PGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp TTHHHHHHHHTCC---TTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHH
T ss_pred HHHHHHHHhhCCC---CCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHH
Confidence 5889999999986 4999999999999999999998 579999999999999998732369999999999999999
Q ss_pred HhcCCCcccEEEEecccCccccCCCCCCccCCCCCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHhcCcccHHHHHHH
Q psy2376 470 KKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKE 549 (896)
Q Consensus 470 ~~~~~~~~d~il~dlG~ss~q~~~~~rgfs~~~~~~ldmrm~~~~~~~a~~~~~~~~~~~l~~i~~~yg~~~~~~~~a~~ 549 (896)
++.|+++||||+|||||||+|+|+++|||||++||||||||| ++|.||+||||+|+|+||++||++|||||+|++||++
T Consensus 83 ~~~g~~~vDgIL~DLGvSS~Qld~~~RGFSf~~d~pLDMRMd-~~~~tA~~~vn~~~~~~L~~i~~~yGee~~a~~iA~~ 161 (285)
T 1wg8_A 83 AALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMG-LEGPTAKEVVNRLPLEALARLLRELGEEPQAYRIARA 161 (285)
T ss_dssp HHTTCSCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSS-SCSCCHHHHHHHSCHHHHHHHHHHHHCCTTHHHHHHH
T ss_pred HHcCCCCcCEEEeCCccccccccccccCccccCCCcchhhcC-CCCCcHHHHHhhCCHHHHHHHHHHhcCHhHHHHHHHH
Confidence 999998999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcchHHHHHHHHhhccCCCCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHhccccCceEEEEeecchhHH
Q psy2376 550 IVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 629 (896)
Q Consensus 550 i~~~r~~~~~~~t~~l~~~~~~~~~~~~~~~~~~~~~fqalri~vn~el~~l~~~l~~~~~~l~~~g~~~visfhsledr 629 (896)
||++|+++||+||.||+++|++++|. ++++||||||||||||+||+||++|+++|++++++|+||||++||||||||||
T Consensus 162 Iv~~R~~~pi~tt~~L~~ii~~~~p~-~~~~hpatr~FQAlRI~VN~EL~~L~~~L~~a~~~L~~gGrl~visfHSLEDR 240 (285)
T 1wg8_A 162 IVAAREKAPIETTTQLAEIVRKAVGF-RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDR 240 (285)
T ss_dssp HHHHHHHSCCCBHHHHHHHHHHHHCC-CSSSCTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHEEEEEEEEEEECSHHHHH
T ss_pred HHHHhccCCCCCHHHHHHHHHHHcCC-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCcHHHH
Confidence 99999999999999999999999996 34579999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q psy2376 630 IVKNFINF 637 (896)
Q Consensus 630 ~vk~~~~~ 637 (896)
|||+||++
T Consensus 241 iVK~~~~~ 248 (285)
T 1wg8_A 241 VVKRFLRE 248 (285)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999996
No 3
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=100.00 E-value=1.9e-65 Score=555.83 Aligned_cols=241 Identities=45% Similarity=0.698 Sum_probs=226.8
Q ss_pred cchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHH
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELD 466 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~ 466 (896)
.+++|+++.+.++ +++.++|+|+|.||||..++++++ +++|+|+|+|++|++.|++. .++|+++++++|.+++
T Consensus 13 vLl~e~l~~L~~~---~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 13 VMVREVIEFLKPE---DEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp TTHHHHHHHHCCC---TTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHHHhcCCC---CCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 4789999999875 489999999999999999999985 78999999999999999864 2368999999999999
Q ss_pred HHHHhcCCCcccEEEEecccCccccCCCCCCccCCCCCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHhcCc-ccHHH
Q psy2376 467 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEE-RFAKK 545 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~dlG~ss~q~~~~~rgfs~~~~~~ldmrm~~~~~~~a~~~~~~~~~~~l~~i~~~yg~~-~~~~~ 545 (896)
..+++.+..++|+|++|+|+||+|+|+++|||||..|+|||||||+..+.||+||+|++++++|.+|++.|||| +++++
T Consensus 89 ~~l~~~g~~~~D~Vl~D~gvSs~qld~~~rgfs~~~d~pLdmrm~~~~~~ta~~~l~~~~~~~L~~i~~~yGee~r~a~~ 168 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARR 168 (301)
T ss_dssp HHHHHTTCSCEEEEEEECSCCHHHHHTSCSCSSSSSCCBSCCCSSTTSSCCHHHHHHHSCHHHHHHHHHHTTCCTTTHHH
T ss_pred HHHHhcCCCCCCEEEEcCccchhhhcccccceEEeecccceeccCCccCccHHHHHhcCCHHHHHHHHHHhCccHHHHHH
Confidence 88887776789999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhccCCCcchHHHHHHHHhhccC-C--CCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHhccccCceEEEEe
Q psy2376 546 IAKEIVHYRSITPITRTKQLVEIILKSIRG-N--KRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 622 (896)
Q Consensus 546 ~a~~i~~~r~~~~~~~t~~l~~~~~~~~~~-~--~~~~~~~~~~fqalri~vn~el~~l~~~l~~~~~~l~~~g~~~vis 622 (896)
||++|+++| ||+||.||+++|++++|. + ++++||||||||||||+||+||++|+++|+++.++|+||||++|||
T Consensus 169 ia~aIv~~r---pi~tt~~L~~ii~~~~p~~~~~~~~~~pa~r~fQalRi~vn~el~~l~~~l~~~~~~l~~ggr~~vis 245 (301)
T 1m6y_A 169 IARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVIS 245 (301)
T ss_dssp HHHHHHHTC---SCCBHHHHHHHHHHHSCHHHHHHCSSCTTHHHHHHHHHHHHTHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred HHHHHHHcC---CCCCHHHHHHHHHHHCCcccccccCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCEEEEEe
Confidence 999999998 999999999999999985 2 3356999999999999999999999999999999999999999999
Q ss_pred ecchhHHHHHHHHhh
Q psy2376 623 FHSLEDRIVKNFINF 637 (896)
Q Consensus 623 fhsledr~vk~~~~~ 637 (896)
||||||||||+||++
T Consensus 246 fhsledr~vk~~~~~ 260 (301)
T 1m6y_A 246 FHSLEDRIVKETFRN 260 (301)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhhc
Confidence 999999999999997
No 4
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=100.00 E-value=3.6e-54 Score=459.44 Aligned_cols=223 Identities=20% Similarity=0.264 Sum_probs=201.4
Q ss_pred ccccccccccccccccCCceeeecc-CCCcceEEEEeecCHHHHHHHHHcCCCEEEEccCCCccCCCCcc-CChHHHHHH
Q psy2376 664 RCKPKKKLNIKKYEDYCPNGLQVEG-RSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI-VGIKKKRLE 741 (896)
Q Consensus 664 ~~~~~~~~~~~~~e~wd~~Gl~~~~-~~~v~~i~~~~~~t~~vi~~A~~~~~~lIitHHP~~f~~~~~~~-~~~~~~~~~ 741 (896)
-..+|+.+|++.+|+|||+|||+|+ +++|++|++|+|+|+++++||+++||||||||||+||++.+++. .+++++++.
T Consensus 9 ~~~le~~~p~~~a~~~D~~GL~vG~~~~~V~~I~~alD~t~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i~ 88 (267)
T 2fyw_A 9 IQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYI 88 (267)
T ss_dssp HHHHHHHSCGGGSCTTCCCEEEESCSSSBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHH
T ss_pred HHHHHHhCCHhHcCCCCCCeeEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccccCchHHHHHH
Confidence 3468999999999999999999986 58999999999999999999999999999999999999998874 688899999
Q ss_pred HHHHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCccCc-ccccceeecccccccCCccCHHHHHHHHHhHhCCC
Q psy2376 742 QLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNN-IGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKK 820 (896)
Q Consensus 742 ~l~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~~~-~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~ 820 (896)
+|++|||++||+|||||++++ |+|++||+.|||++.+++.+.. ...+|++++ + +|+|++||++++|++|+++
T Consensus 89 ~li~~~I~lya~Ht~lD~~~~-G~n~~La~~Lgl~~~~~l~~~~~~~g~G~ig~-----l-~~~t~~el~~~vk~~l~~~ 161 (267)
T 2fyw_A 89 DLIKHDIAVYVSHTNIDIVEN-GLNDWFCQMLGIEETTYLQETGPERGIGRIGN-----I-QPQTFWELAQQVKQVFDLD 161 (267)
T ss_dssp HHHHTTCEEEECSHHHHHSTT-SHHHHHHHHHTCEEEEEEEEEETTEEEEEEEE-----E-EEEEHHHHHHHHHHHTTCS
T ss_pred HHHHCCCeEEEeeccccccCC-CHHHHHHHHcCCCcccccccCCCCCCeEEEEE-----e-ccCCHHHHHHHHHHHcCCC
Confidence 999999999999999999986 9999999999999988775321 012455543 4 6899999999999999987
Q ss_pred cEE-E----cCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCChhhhhhhhhhccc
Q psy2376 821 PIV-I----GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERYDKSPNRE 894 (896)
Q Consensus 821 ~~~-~----g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH~~sE~~~~~~~~~ 894 (896)
.++ + |+++++|+|||||+|||++++++|.++|||+|||||++||++++|++.|+++||+||| ||++|++.++|
T Consensus 162 ~vr~~~~~~g~~~~~I~rVAv~~GsG~~~~~~a~~~gaD~~ITGd~~~h~~~~A~e~gi~~i~~GH~-tE~~~~~~l~~ 239 (267)
T 2fyw_A 162 SLRMVHYQEDDLQKPISRVAICGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHY-IEVIFVEKIAA 239 (267)
T ss_dssp CCEEECSCTTGGGSEEEEEEEESSSCGGGHHHHHHTTCSEEEESCCCHHHHHHHHHTTCEEEECCGG-GGGHHHHHHHH
T ss_pred eEEEEeccCCCCCCceeEEEEEcCCCHHHHHHHHHcCCCEEEEccCcHHHHHHHHHCCCeEEECCcH-HHHHHHHHHHH
Confidence 664 4 7777889999999999999999999999999999999999999999999999999999 99999987765
No 5
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=100.00 E-value=6.5e-54 Score=451.79 Aligned_cols=219 Identities=44% Similarity=0.746 Sum_probs=197.9
Q ss_pred cccccccccccccccCCceeeeccCCCcceEEEEeecCHHHHHHHHHcCCCEEEEccCCCc-cCCCCccCChHHHHHHHH
Q psy2376 665 CKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFW-KGENSNIVGIKKKRLEQL 743 (896)
Q Consensus 665 ~~~~~~~~~~~~e~wd~~Gl~~~~~~~v~~i~~~~~~t~~vi~~A~~~~~~lIitHHP~~f-~~~~~~~~~~~~~~~~~l 743 (896)
..+|+++|++.+++|||+|||++++++|++|++|+|+|++++++|+++|||+||||||+|| ++.++ ..+.+++++.+|
T Consensus 8 ~~le~~~p~~~~~~~d~~GL~v~~~~~V~~I~~~lD~t~~vi~eAi~~~adlIitHHP~~f~~~~~~-i~~~~~~~i~~l 86 (247)
T 1nmo_A 8 QLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPV-IRGMKRNRLKTL 86 (247)
T ss_dssp HHHHHHTTCTTSCCSSCCEEEECCCSBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTSCCC-CCTHHHHHHHHH
T ss_pred HHHHHhCChhhhCCcCCCeeEECCCCccCEEEEEEcCCHHHHHHHHhCCCCEEEECCchhccCCCcc-ccchHHHHHHHH
Confidence 4678999999999999999999768899999999999999999999999999999999999 55555 456679999999
Q ss_pred HHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEE
Q psy2376 744 IINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIV 823 (896)
Q Consensus 744 ~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~ 823 (896)
++|||++||+|||||+++++|+|++||+.|||++.++++ ++|.+|+ +++|+|++||++++|++|+.+.++
T Consensus 87 i~~~I~ly~~HtnlD~~~~~G~n~~La~~Lgl~~~~~~~--g~G~ig~--------l~~~~t~~~l~~~vk~~l~~~~~~ 156 (247)
T 1nmo_A 87 LANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIE--PLVPWGE--------LTMPVPGLELASWIEARLGRKPLW 156 (247)
T ss_dssp HHTTCEEEECCHHHHHCTTTSHHHHHHHHHTEEEEEEEE--TTEEEEE--------EEEEECHHHHHHHHHHHHTSCCEE
T ss_pred HHCCCEEEEeeechhhCCCCCHHHHHHHHcCCCCccccC--CeEEEEE--------eCCCCcHHHHHHHHHHHcCCCeEE
Confidence 999999999999999998779999999999999877653 3444444 357899999999999999987566
Q ss_pred EcCC-CCceeEEEEEecCchHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCChhhhhhhhhhccc
Q psy2376 824 IGDL-NKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERYDKSPNRE 894 (896)
Q Consensus 824 ~g~~-~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH~~sE~~~~~~~~~ 894 (896)
+|++ +++|+|||||+|||++++++|.++|||+|||||++||++++|++.|+++||+|||+||++|++.++|
T Consensus 157 ~g~~~~~~i~~VAv~~GsG~~~~~~a~~~gaD~~iTGd~~~h~~~~a~e~gi~~i~~GH~~tE~~~~~~l~~ 228 (247)
T 1nmo_A 157 CGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSE 228 (247)
T ss_dssp ECTTSCSSEEEEEECSSSCGGGHHHHHHHCCSEEEESCCCHHHHHHHHHTTCEEEECCHHHHTSHHHHHHHH
T ss_pred ECCCCcCccCEEEEECCCcHHHHHHHHHcCCCEEEEcCccHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHHH
Confidence 7876 5789999999999999999999999999999999999999999999999999999999999987765
No 6
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=100.00 E-value=9e-54 Score=470.68 Aligned_cols=227 Identities=21% Similarity=0.345 Sum_probs=203.6
Q ss_pred chhhcccccccccccccccccCCceeeecc-CCCcceEEEEeecCHHHHHHHHHcCCCEEEEccCCCccCCCCcc-CChH
Q psy2376 659 MKFLARCKPKKKLNIKKYEDYCPNGLQVEG-RSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI-VGIK 736 (896)
Q Consensus 659 ~~~l~~~~~~~~~~~~~~e~wd~~Gl~~~~-~~~v~~i~~~~~~t~~vi~~A~~~~~~lIitHHP~~f~~~~~~~-~~~~ 736 (896)
++.| -..+|+.+|++.+|+|||+|||+|+ +++|++|++|+|+|++|++||+++||||||||||+||+|.+++. .++
T Consensus 7 ~~ei-i~~le~~~P~~~ae~wDn~GL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~~~- 84 (370)
T 2nyd_A 7 IADL-MTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY- 84 (370)
T ss_dssp HHHH-HHHHHHHSCGGGSCTTCCCEEEESCTTSBCCCEEEESSCCHHHHHHHHHHTCCEEEESSCSSCSCCSCCCSSTH-
T ss_pred HHHH-HHHHHHhCCHhHcCCCCcCeEEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcccCCccccCcCCH-
Confidence 4455 5678999999999999999999987 57999999999999999999999999999999999999999874 677
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCccCc--------------------------c----
Q psy2376 737 KKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNN--------------------------I---- 786 (896)
Q Consensus 737 ~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~~~--------------------------~---- 786 (896)
++++.+|++|||++||+|||||++++ |+|++||+.|||++.+++.+.. .
T Consensus 85 ~r~i~~li~~~Ialya~HTnlD~~~~-GvNd~LA~~Lgl~~~~~l~~~~~~~~kl~v~vP~~~~~~v~~al~~aGag~ig 163 (370)
T 2nyd_A 85 GLIIRKLIQHDINLIAMHTNLDVNPY-GVNMMLAKVMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEG 163 (370)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHTSTT-SHHHHHHHHTTCEEEEECSEEEEEEEEEC------------------------
T ss_pred HHHHHHHHHCCCeEEEeechhhccCC-cHHHHHHHHcCCCcccccCccccccceeEEecchhhHHHHHHHHHhccccccc
Confidence 99999999999999999999999986 9999999999999877664210 0
Q ss_pred ----------------------------------------------------------------------------cccc
Q psy2376 787 ----------------------------------------------------------------------------GWIG 790 (896)
Q Consensus 787 ----------------------------------------------------------------------------g~~g 790 (896)
..+|
T Consensus 164 ~Y~~csf~~~G~G~F~p~~~a~P~ig~~g~~~~v~e~rie~i~~~~~~~~v~~al~~~hpyee~ayd~~~l~~~~~~GlG 243 (370)
T 2nyd_A 164 NYEYCFFESEGRGQFKPVGEANPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLG 243 (370)
T ss_dssp ---------------------------------------CEEECSTHHHHHHHHHCC-----CCCCCEEEEEEEEEEESC
T ss_pred ccccceecccccceeccccccCCccccccccccccceEEEEEechhhHHHHHHHHHhhCCccccccccccccccCCCCeE
Confidence 1244
Q ss_pred eeecccccccCCccCHHHHHHHHHhHhCCCcE-EEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccCCchHHHHH
Q psy2376 791 KIINLKRYNFKKIITIKDLFHHITRKIGKKPI-VIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYIS 869 (896)
Q Consensus 791 ~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~-~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a 869 (896)
++++ +++|+|++||++++|++|+++.+ ++|+++++|+|||||+|||++++++|.+.|||+|||||+|||++++|
T Consensus 244 riG~-----L~~p~tl~~~~~~vk~~l~~~~vr~~g~~~~~I~~VAvc~GsG~~~i~~a~~~gaDvyITGD~~~H~~~~A 318 (370)
T 2nyd_A 244 VMAE-----VDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDA 318 (370)
T ss_dssp EEEE-----EEEEEEHHHHHHHHHHHTTCSCCEEESCTTCEEEEEEECCSCCTTSHHHHHHTTCSEEEESCCCHHHHHHH
T ss_pred EEEE-----cCCCCCHHHHHHHHHHHcCCCceEEecCCCCcccEEEEEcCCCHHHHHHHHHcCCCEEEeCCccHHHHHHH
Confidence 5443 46899999999999999998877 56888889999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEeCChhhhhhhhhhccc
Q psy2376 870 RESGVAYFAAGHHATERYDKSPNRE 894 (896)
Q Consensus 870 ~~~g~~li~~gH~~sE~~~~~~~~~ 894 (896)
.++|+++||+|||+|| ++++.++|
T Consensus 319 ~~~gi~vid~GH~~tE-~~~~~l~~ 342 (370)
T 2nyd_A 319 KIHGVNLIDINHYSEY-VMKEGLKT 342 (370)
T ss_dssp HHTTCCEEECCGGGGG-GHHHHHHH
T ss_pred HHCCCcEEEcCchHHH-HHHHHHHH
Confidence 9999999999999999 99987765
No 7
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=6.5e-54 Score=449.96 Aligned_cols=214 Identities=30% Similarity=0.461 Sum_probs=196.5
Q ss_pred ccccccccccccc-ccCCceeeeccCCCcceEEEEeecCHHHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHH
Q psy2376 665 CKPKKKLNIKKYE-DYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQL 743 (896)
Q Consensus 665 ~~~~~~~~~~~~e-~wd~~Gl~~~~~~~v~~i~~~~~~t~~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l 743 (896)
..+|+.+|++.+| +|||+|||++++++|++|++|+|+|++++++|+++|||+||||||+|| +.++...+++++++.+|
T Consensus 8 ~~le~~~p~~~~~~~~d~~GL~veG~~~V~~I~~alD~t~~vi~eAi~~~adlIitHHp~~f-~~~~~~~~~~~~~i~~l 86 (242)
T 2yyb_A 8 RYLDAYLRIQDFPQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFW-GKPFPIVGHHKRRLETL 86 (242)
T ss_dssp HHHHHHTTGGGCTTCSSCCEEEECCCSBCCCEEEEEECSHHHHHHHHHTTCSEEEEEECSCS-SCCCCSCHHHHHHHHHH
T ss_pred HHHHHhCCHhhhccCCCCCeEEEcCCcccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcCc-CcccccccHHHHHHHHH
Confidence 4678999999999 999999999555899999999999999999999999999999999999 98887677889999999
Q ss_pred HHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcE-
Q psy2376 744 IINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPI- 822 (896)
Q Consensus 744 ~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~- 822 (896)
++|||++|++|||||+++++|+|++||+.|||++.+++. +|.+|+ +++|+|++||++++|++|+ +.+
T Consensus 87 i~~~I~ly~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~l~---~G~ig~--------l~~~~t~~~l~~~vk~~l~-~~vr 154 (242)
T 2yyb_A 87 FQGGINLYAAHLPLDAHEEVGNNFVLARELGLVDLTPWD---VGVKGR--------FPQPTPLLQVADRLGQLTG-MQPL 154 (242)
T ss_dssp HHTTCEEEECSHHHHHCTTTCHHHHHHHTTTCCSCCCCS---TTCCCC--------CCCCSCBSTHHHHHHHTTS-SCCE
T ss_pred HHCCCeEEEeccHHhcCCCcCHHHHHHHHcCCCCCccce---eEEEEE--------eCCCcCHHHHHHHHHHHcc-cCeE
Confidence 999999999999999998669999999999999988763 444554 4679999999999999999 666
Q ss_pred EEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCChhhhhhhhhhccc
Q psy2376 823 VIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERYDKSPNRE 894 (896)
Q Consensus 823 ~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH~~sE~~~~~~~~~ 894 (896)
++|+++++|+|||+|+|||++++++| |||+|||||++||++++|+++|+++||+|||+||++|++.+.|
T Consensus 155 ~~g~~~~~i~~VAv~~GsG~~~~~~a---gaD~~iTGd~~~h~~~~A~e~gi~~i~~GH~~tE~~~~~~l~~ 223 (242)
T 2yyb_A 155 VHQGGLDHVETVILVSGSGTGLLPKV---DADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAA 223 (242)
T ss_dssp EEESSCSBCCCEEEECSSCGGGGGGC---CSSEEEESCCCGGGHHHHHHTTCEEEECCHHHHTTHHHHHHHH
T ss_pred EecCCCCceeEEEEEcCCCHHHHHHc---CCCEEEEecCCHHHHHHHHHCCCeEEECCcHHHHHHHHHHHHH
Confidence 46888888999999999999999876 9999999999999999999999999999999999999987765
No 8
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=100.00 E-value=1.5e-53 Score=471.69 Aligned_cols=230 Identities=19% Similarity=0.272 Sum_probs=205.5
Q ss_pred ccchhhcccccccccccccccccCCceeeecc-CCCcceEEEEeecCHHHHHHHHHcCCCEEEEccCCCccCCCCcc-CC
Q psy2376 657 PKMKFLARCKPKKKLNIKKYEDYCPNGLQVEG-RSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI-VG 734 (896)
Q Consensus 657 p~~~~l~~~~~~~~~~~~~~e~wd~~Gl~~~~-~~~v~~i~~~~~~t~~vi~~A~~~~~~lIitHHP~~f~~~~~~~-~~ 734 (896)
.+++.| -..+|+.+|++.+|+|||+|||+|+ +++|++|++|+|+|++|++||+++||||||||||+||+|.|++. .+
T Consensus 29 m~~~ei-i~~le~~aP~~lae~wDnvGL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~ 107 (397)
T 2gx8_A 29 PNGHEI-ISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 107 (397)
T ss_dssp CBHHHH-HHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred ccHHHH-HHHHHHhCCHhHcCCCCCCeeEeCCCccccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccCcCc
Confidence 345566 5688999999999999999999987 57999999999999999999999999999999999999999974 68
Q ss_pred hHHHHHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCccC---------------------------cc-
Q psy2376 735 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKN---------------------------NI- 786 (896)
Q Consensus 735 ~~~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~~---------------------------~~- 786 (896)
++++++.+|++|||++||+|||||++++ |+|+|||+.|||++.+++.+. +.
T Consensus 108 ~~~r~i~~li~~~Iavya~HTnlD~~~~-GvNd~LA~~LGl~~~~~L~~~~~~~~~Kl~v~vp~~~~~~v~~al~~aGag 186 (397)
T 2gx8_A 108 AYGKIIEKCIKNDIAIYAAHTNVDVAKG-GVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAG 186 (397)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHSTT-SHHHHHHHHTTCEEEEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHCCCeEEEeechhhcCCC-CHHHHHHHHcCCCcccccCcccccccceeeEeccchhhHHHHHHhhhcccc
Confidence 8999999999999999999999999986 999999999999987655321 00
Q ss_pred --------------------------------------------------------------------------------
Q psy2376 787 -------------------------------------------------------------------------------- 786 (896)
Q Consensus 787 -------------------------------------------------------------------------------- 786 (896)
T Consensus 187 ~ig~y~~csf~~~G~G~F~p~~~a~P~iG~~g~~~~v~e~rie~i~p~~~~~~v~~al~~~HPyee~ayd~~~l~~~~~~ 266 (397)
T 2gx8_A 187 HIGNYSHCTFSSEGTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGET 266 (397)
T ss_dssp CBTTEEEEEEEEEEEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHSSSSSCCEEEEEEEEEEEE
T ss_pred ccccccccccccccceeeccccCCCCccCCcCcccccceeEEEEEecHHHHHHHHHHHHHhCCccccccccccccccccc
Confidence
Q ss_pred cccceeecccccccCCccCHHHHHHHHHhHhCCCcE-EEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccCCchH
Q psy2376 787 GWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPI-VIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISEST 865 (896)
Q Consensus 787 g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~-~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~~~h~ 865 (896)
..+|++++ +++|+|++||++++|++|+++.+ ++|+++++|+|||||+|||++++++|.+.|||+|||||+|||+
T Consensus 267 ~GlGriG~-----L~~p~tl~~f~~~vk~~L~~~~vr~~g~~~~~I~rVAvc~GSG~~~i~~A~~~gaDvyITGD~~~H~ 341 (397)
T 2gx8_A 267 LGLGKIGY-----LQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHV 341 (397)
T ss_dssp EEEEEEEE-----EEEEEEHHHHHHHHHHHTTCSCCEEESCTTSEEEEEEEEEEECGGGHHHHHHTTCSEEEEECCCHHH
T ss_pred CCeEEEEE-----cCCCCCHHHHHHHHHHHcCCCceEEECCCCCceeEEEEEcCCcHHHHHHHHHCCCCEEEecCCcHHH
Confidence 12344443 56899999999999999998877 5688888999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEeCChhhhhhhhhhccc
Q psy2376 866 VYISRESGVAYFAAGHHATERYDKSPNRE 894 (896)
Q Consensus 866 ~~~a~~~g~~li~~gH~~sE~~~~~~~~~ 894 (896)
+++|.+.|+++||+|||+|| ++++.++|
T Consensus 342 a~dA~e~Gi~vId~GH~~sE-~~~~~l~~ 369 (397)
T 2gx8_A 342 AHDAMMLGLNIVDPGHNVEK-VMKQGVQK 369 (397)
T ss_dssp HHHHHHHTCEEEECCGGGGG-HHHHHHHH
T ss_pred HHHHHHCCCcEEEcCchHHH-HHHHHHHH
Confidence 99999999999999999999 99987765
No 9
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=99.97 E-value=6.2e-31 Score=267.32 Aligned_cols=202 Identities=13% Similarity=0.165 Sum_probs=156.7
Q ss_pred ccccccccccccccCCceeeeccCCCcceEEEEeecCHHHHHHHHHcCCCEEEEccCCCccCCCCc--------------
Q psy2376 666 KPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSN-------------- 731 (896)
Q Consensus 666 ~~~~~~~~~~~e~wd~~Gl~~~~~~~v~~i~~~~~~t~~vi~~A~~~~~~lIitHHP~~f~~~~~~-------------- 731 (896)
.++++.| .+|+|||+|||+ .+++|++|++++|+|.+++++|+++||||||||||++|.+..++
T Consensus 15 ~~~e~ap--lae~~dd~Gllv-~~~eV~kIlvaLD~t~~vv~eA~~~g~dlIItHHP~~~~~~~~~~~V~~~q~d~~~~~ 91 (278)
T 3rxy_A 15 IALEMAE--MRTLPADSAVYV-ESTDLKRVMMGIDIGPAELLLARQLGCDGVIAHHPAGGSATLNFPEVLTRHVELMVEH 91 (278)
T ss_dssp HHHHHTT--CSSCCTTCEEEE-CCSCBSEEEEESSCCHHHHHHHHHTTCSEEEESSCCSHHHHHHGGGGGGHHHHHHHHT
T ss_pred HHHHhcC--cccCCCCceeee-ccccccEEEEEECCCHHHHHHHHHcCCCEEEECCCcchhhhhhHHHHHHHHHHHHHHc
Confidence 5678888 999999999999 77899999999999999999999999999999999999821110
Q ss_pred -c-----CChH----------------HHHHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCccCccccc
Q psy2376 732 -I-----VGIK----------------KKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWI 789 (896)
Q Consensus 732 -~-----~~~~----------------~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~~~~g~~ 789 (896)
. .+.. .+.+..+.--|+++.++|||.|.. +...|-+.++-. +
T Consensus 92 Gvpin~ae~~~~~r~~ev~r~~~~~N~~r~v~~Arll~~p~m~~H~paD~~----~~~~l~~~~~~~------------~ 155 (278)
T 3rxy_A 92 GVPATAARDAIQGLLTRSLLRAQSANHDHTPSVARLLEMPFLNIHLPLDEV----GRRIMVKTIQEA------------V 155 (278)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHTCCEEECCHHHHHH----HHHHHHHHHHHH------------H
T ss_pred CCCHHHHHHHHHHHHHHHHHhcccccccccccHHHHhCCcceecCcchHHH----HHHHHHHHHhhh------------h
Confidence 0 0001 122333344589999999999987 577777766300 0
Q ss_pred ceeecccccccCCccCHHHHHHHHHhHh------CCCcEEEcCCCCceeEEEEEecCc----hHHHHHHHHcCCcEEEEc
Q psy2376 790 GKIINLKRYNFKKIITIKDLFHHITRKI------GKKPIVIGDLNKKIYEIGWCTGAA----QNLLTDAINEGVTAYISG 859 (896)
Q Consensus 790 g~i~~~~~~~~~~~~~~~el~~~~~~~l------~~~~~~~g~~~~~v~rvai~~Gsg----~~~i~~a~~~g~D~~ITG 859 (896)
+.. .++-|++|+++.+++.- ..+.+.+|+++++++||+|++|+| .+.+++|.++|+|+||||
T Consensus 156 ~~~--------~p~~t~~dvi~~L~~ipEy~~a~~~p~I~~g~~~~~vgkIaV~~GgGtsG~~~~i~~a~~~GvDt~ITG 227 (278)
T 3rxy_A 156 EPL--------GDEARVQDAIDALMTLPEFAGAATRIMVPVGAVDQPLGKIAVVHGAGTNGGYAVARAYFDHGVRTVLYI 227 (278)
T ss_dssp GGG--------GGGCBHHHHHHHHTTSHHHHSCSSCCEEEESCTTSBCCSEEECCSSSSCCHHHHHHHHHHTTCCEEEES
T ss_pred hcc--------CccchHHHHHHHHHhCchhhhcCCCCEEEeCCCCCcCCEEEEEcCCCCCCcHHHHHHHHHcCCCEEEEe
Confidence 100 11246666666554432 234567899999999999999944 568999999999999999
Q ss_pred cCCchHH-HHHHHcCCeEEEeCChhhhhhhhhhccc
Q psy2376 860 EISESTV-YISRESGVAYFAAGHHATERYDKSPNRE 894 (896)
Q Consensus 860 d~~~h~~-~~a~~~g~~li~~gH~~sE~~~~~~~~~ 894 (896)
|++|+.+ ..|+|.|+|+|.+|||+||.+|++.+.+
T Consensus 228 e~~~~~~~~~A~E~ginVI~AGHyATEt~Gv~aL~~ 263 (278)
T 3rxy_A 228 HIAPEEAERLRREGGGNLIVTGHIASDLVGINRYVQ 263 (278)
T ss_dssp CCCHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHcCCeEEEeccchHhHHHHHHHHH
Confidence 9999999 9999999999999999999999987765
No 10
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.91 E-value=3.8e-24 Score=247.23 Aligned_cols=277 Identities=11% Similarity=0.063 Sum_probs=229.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHhHHHHhcCHHHHH
Q psy2376 2 SLHKTFITISSITLFSRITGLFREILFARVFGASIYTDAFNIAFRIPNLLRRLFAEGAFSQAFVPILTEYKNKRGNIATK 81 (896)
Q Consensus 2 ~l~k~a~~l~i~tlls~llG~v~~i~la~~lG~s~~~da~~~a~~i~~~l~~i~~~ggls~a~ip~is~~~~~~~~~~~~ 81 (896)
+++|.++++++.++++.+.++++..++++ +|++ ..++++++.++..++..+ . .+++.+..|.++++.+++|+++.+
T Consensus 13 ~~~~~~~p~~~~~~~~~~~~~v~~~~~~~-lg~~-~~~~~~~~~~i~~~~~~~-~-~g~~~~~~~~is~~~g~~~~~~~~ 88 (460)
T 3mkt_A 13 NLIKLATPVLIASVAQTGMGFVDTIMAGG-VSAI-DMAAVSIAASIWLPSILF-G-VGLLMALVPVVAQLNGAGRQHKIP 88 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHH-HTTT-TSSHHHHHHHHHHHHHHH-H-HHHHHHHGGGCTTTTSSSSTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCHH-HHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHcCCChhHHH
Confidence 57899999999999999999999999999 9986 456999999997766544 3 469999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhHh
Q psy2376 82 KLIDHVATVLIWFMFFICVFGIIMAPIIVYLVATGFIDNYKIFNITVSLTRIMFPYVGFMAFITLASSILNIWSQFKIPA 161 (896)
Q Consensus 82 ~~~~~~~~l~li~~lli~ll~~l~a~~I~~~l~~g~~~~~~~~~~a~~~l~Il~~~l~f~~l~~~~~~il~~~~~f~~~~ 161 (896)
+.+++.+.+.++++++++++ +++++++..+++. +++..+.+..|+++++++.++..+..++++++|+.++++.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~----~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 163 (460)
T 3mkt_A 89 FEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDV----EEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAM 163 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHTTCSSCSS----TTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999999999999887765 7788888877743 788889999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-----------------H------------HHHHHHHHHHHHHcCCcceeec-CCCCCCCCHHHHHHHHH
Q psy2376 162 FTPILLNISC-----------------G------------ALQIIIQIPSLIKIGMFPHIKL-NPSHGFKNIAVRRILKK 211 (896)
Q Consensus 162 i~~ii~nii~-----------------g------------i~~~li~~~~l~k~~~~~~~~~-~~~~~~~~~~lk~ll~~ 211 (896)
+.+++.+++. | +.+.++.++++++++...+.+. .....++++.+|+++++
T Consensus 164 ~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (460)
T 3mkt_A 164 VIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRL 243 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHH
Confidence 8877654432 1 1112222333333322111111 00012456789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHhh
Q psy2376 212 MGPSVFSVFAAQISLMLNTNIASQMREGSLSCLSYADRLMEFPTTLLGVTFNTILLPNLSKARIENNTEEYSAILDW 288 (896)
Q Consensus 212 glP~~l~~~~~~i~~~vd~~i~s~lg~~ava~~~~A~~l~~l~~~li~~ais~~l~P~lS~~~~~~d~~~~~~~~~~ 288 (896)
++|.+++++..++...+|+.+++.+|+.++++|++++++.+++. ++..+++++..|.++++++++|.+++++..++
T Consensus 244 ~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~~-~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~ 319 (460)
T 3mkt_A 244 GFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVF-MFPMSIGAAVSIRVGHKLGEQDTKGAAIAANV 319 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 68899999999999999999999999888877
No 11
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=98.80 E-value=9.3e-08 Score=109.58 Aligned_cols=160 Identities=11% Similarity=0.084 Sum_probs=139.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHhHHHHhcCHHHH
Q psy2376 1 MSLHKTFITISSITLFSRITGLFREILFARVFGASIYTDAFNIAFRIPNLLRRLFAEGAFSQAFVPILTEYKNKRGNIAT 80 (896)
Q Consensus 1 ~~l~k~a~~l~i~tlls~llG~v~~i~la~~lG~s~~~da~~~a~~i~~~l~~i~~~ggls~a~ip~is~~~~~~~~~~~ 80 (896)
++++|.+.+.++.++...+...+...++++ +|++ ..++|+.++.+..+...+. .+++.+..|.+++..+++|+++.
T Consensus 238 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~-~g~~-~va~~~i~~~i~~~~~~~~--~~~~~a~~p~i~~~~g~~~~~~~ 313 (460)
T 3mkt_A 238 IRLFRLGFPVAAALFFEVTLFAVVALLVAP-LGST-VVAAHQVALNFSSLVFMFP--MSIGAAVSIRVGHKLGEQDTKGA 313 (460)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHTCT-TSSH-HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHSSCCCTT
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-cChH-HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcCCCHHHH
Confidence 457888899999888888887777666554 5885 5679999999998888543 36999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhH
Q psy2376 81 KKLIDHVATVLIWFMFFICVFGIIMAPIIVYLVATGFIDNYKIFNITVSLTRIMFPYVGFMAFITLASSILNIWSQFKIP 160 (896)
Q Consensus 81 ~~~~~~~~~l~li~~lli~ll~~l~a~~I~~~l~~g~~~~~~~~~~a~~~l~Il~~~l~f~~l~~~~~~il~~~~~f~~~ 160 (896)
++.....+.+.+++++.++++++++++++..++.. +++..+.+..++++++++.++.++..+..+++++.++.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 389 (460)
T 3mkt_A 314 AIAANVGLMTGLATACITALLTVLFREQIALLYTE----NQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAI 389 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC----CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 99999999999999999999999999999998754 67788899999999999999999999999999999999999
Q ss_pred hHHHHHHH
Q psy2376 161 AFTPILLN 168 (896)
Q Consensus 161 ~i~~ii~n 168 (896)
+...++..
T Consensus 390 ~~~~~~~~ 397 (460)
T 3mkt_A 390 FHRTFISY 397 (460)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776544
No 12
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.64 E-value=6.4e-08 Score=97.76 Aligned_cols=77 Identities=21% Similarity=0.427 Sum_probs=66.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|..+|.|..+..+++++++.++++|+|+++++++.+++.. .++++++++++.++.+..+ .++|.|
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----~~fD~v 97 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYID----CPVKAV 97 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCC----SCEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhcc----CCceEE
Confidence 5889999999999999999999877889999999999999997652 3689999999988765332 369999
Q ss_pred EEeccc
Q psy2376 481 LFDLGI 486 (896)
Q Consensus 481 l~dlG~ 486 (896)
++|++.
T Consensus 98 ~~~~~~ 103 (197)
T 3eey_A 98 MFNLGY 103 (197)
T ss_dssp EEEESB
T ss_pred EEcCCc
Confidence 999877
No 13
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.35 E-value=1.2e-06 Score=87.37 Aligned_cols=74 Identities=20% Similarity=0.352 Sum_probs=61.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C-CCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D-SRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|..+|.|..|..++++ .++|+|+|+++++++.|++.. + ++++++++++.++.++.. .++|.|+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~----~~fD~v~ 94 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVR----EPIRAAI 94 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCC----SCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhcc----CCcCEEE
Confidence 5899999999999999999987 479999999999999997642 1 789999999988765432 3699999
Q ss_pred Eeccc
Q psy2376 482 FDLGI 486 (896)
Q Consensus 482 ~dlG~ 486 (896)
+|+|.
T Consensus 95 ~~~~~ 99 (185)
T 3mti_A 95 FNLGY 99 (185)
T ss_dssp EEEC-
T ss_pred EeCCC
Confidence 98754
No 14
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.07 E-value=3.1e-05 Score=88.17 Aligned_cols=79 Identities=18% Similarity=0.136 Sum_probs=67.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c-CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|++.|.||.|..+++..++.++|+|+|+|+.+++.+++. . -+++++++.+..++.....+ .+|.|+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~----~FD~Il 180 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSG----FFDRIV 180 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTT----CEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccc----cCCEEE
Confidence 589999999999999999999997779999999999999988753 1 24699999998888765533 699999
Q ss_pred EecccCc
Q psy2376 482 FDLGISS 488 (896)
Q Consensus 482 ~dlG~ss 488 (896)
.|--+|.
T Consensus 181 ~DaPCSg 187 (456)
T 3m4x_A 181 VDAPCSG 187 (456)
T ss_dssp EECCCCC
T ss_pred ECCCCCC
Confidence 9987774
No 15
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.00 E-value=3.5e-05 Score=79.11 Aligned_cols=79 Identities=10% Similarity=0.103 Sum_probs=64.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|..+|.|+++..++++++++++|+|+|+++++++.+++. ..+++++++++..+....+.+.+..++|.|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 378999999999999999999997688999999999999998764 346899999998665444443332469999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|.
T Consensus 138 ~~d~ 141 (223)
T 3duw_A 138 FIDA 141 (223)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9874
No 16
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.95 E-value=3.8e-05 Score=80.63 Aligned_cols=81 Identities=19% Similarity=0.332 Sum_probs=64.1
Q ss_pred HhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHH
Q psy2376 395 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 395 ~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l 469 (896)
+++.+..+ +++.++|+.+|.|..+..++++++|.++++|+|+++++++.|++. ..+|+++++.+..+. +
T Consensus 85 i~~~~~~~---~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 158 (255)
T 3mb5_A 85 IVAYAGIS---PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG---I 158 (255)
T ss_dssp HHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC---C
T ss_pred HHHhhCCC---CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc---c
Confidence 33444443 588999999999999999999977889999999999999999764 256799999998643 2
Q ss_pred HhcCCCcccEEEEec
Q psy2376 470 KKYNIKKIDGILFDL 484 (896)
Q Consensus 470 ~~~~~~~~d~il~dl 484 (896)
. -.++|.|+.|.
T Consensus 159 ~---~~~~D~v~~~~ 170 (255)
T 3mb5_A 159 E---EENVDHVILDL 170 (255)
T ss_dssp C---CCSEEEEEECS
T ss_pred C---CCCcCEEEECC
Confidence 1 23589998754
No 17
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.91 E-value=6.6e-05 Score=86.30 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=66.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c-CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|++.|.|+-|..+++..++.++|+|+|+++.+++.+++. . -+++++++.+..++..... ..+|.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~----~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVP----EMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHST----TCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhcc----ccCCEEE
Confidence 489999999999999999999997789999999999999988754 1 2479999999888765332 2699999
Q ss_pred EecccCcc
Q psy2376 482 FDLGISSN 489 (896)
Q Consensus 482 ~dlG~ss~ 489 (896)
.|-=+|..
T Consensus 193 ~D~PcSg~ 200 (479)
T 2frx_A 193 LDAPCSGE 200 (479)
T ss_dssp EECCCCCG
T ss_pred ECCCcCCc
Confidence 99777653
No 18
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.89 E-value=8.7e-05 Score=73.71 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=61.1
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CC-CeEEEccChhcH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DS-RFSIIHNCFTEL 465 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~-~~~~~~~~~~~~ 465 (896)
.+.+++.+..+ ++..++|..+|.|..+..++++ ..+++|+|+++++++.+++.. .+ |+++++.+..+.
T Consensus 41 ~~~l~~~~~~~---~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 41 TKILVENVVVD---KDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHCCCC---TTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred HHHHHHHcccC---CCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 34555666553 4889999999999999999987 469999999999999987642 22 599999887653
Q ss_pred HHHHHhcCCCcccEEEEec
Q psy2376 466 DIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~dl 484 (896)
. . -.++|.|+.|.
T Consensus 115 ~---~---~~~~D~v~~~~ 127 (194)
T 1dus_A 115 V---K---DRKYNKIITNP 127 (194)
T ss_dssp C---T---TSCEEEEEECC
T ss_pred c---c---cCCceEEEECC
Confidence 2 1 23689998753
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.81 E-value=8.3e-05 Score=75.18 Aligned_cols=82 Identities=11% Similarity=0.183 Sum_probs=61.2
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~ 468 (896)
..+++.+..+ +++.++|.-+|.|..+..++++. |.++|+|+|+++++++.+++.. -+++++++++..+..
T Consensus 30 ~~~l~~l~~~---~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 103 (204)
T 3e05_A 30 AVTLSKLRLQ---DDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL-- 103 (204)
T ss_dssp HHHHHHTTCC---TTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC--
T ss_pred HHHHHHcCCC---CCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh--
Confidence 3345555554 58999999999999999999996 5789999999999999997642 267888888874321
Q ss_pred HHhcCCCcccEEEEe
Q psy2376 469 LKKYNIKKIDGILFD 483 (896)
Q Consensus 469 l~~~~~~~~d~il~d 483 (896)
.. .+++|.|+.|
T Consensus 104 -~~--~~~~D~i~~~ 115 (204)
T 3e05_A 104 -DD--LPDPDRVFIG 115 (204)
T ss_dssp -TT--SCCCSEEEES
T ss_pred -hc--CCCCCEEEEC
Confidence 11 1357777755
No 20
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.76 E-value=3.4e-05 Score=83.62 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=66.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cC-CCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TD-SRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~-~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|++.|.||.|..+++..++.++|+|+|+|+++++.+++. .. +++++++.++.++...... ..++|.|+
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~--~~~fD~Vl 179 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR--YHEVHYIL 179 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGG--GTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccc--cCCCCEEE
Confidence 589999999999999999999987789999999999999988753 22 5799999998776432111 13699999
Q ss_pred EecccCcc
Q psy2376 482 FDLGISSN 489 (896)
Q Consensus 482 ~dlG~ss~ 489 (896)
+|-.+|+.
T Consensus 180 ~D~PcSg~ 187 (309)
T 2b9e_A 180 LDPSCSGS 187 (309)
T ss_dssp ECCCCCC-
T ss_pred EcCCcCCC
Confidence 99999875
No 21
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.75 E-value=0.00022 Score=81.05 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=66.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|++.|.|+.|..+++..+ +++|+|+|+++..++.+++. .+-++++++.+..++.+.+.. .++|.|+.
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~---~~fD~Vl~ 321 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE---QQFDRILL 321 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTT---CCEEEEEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhccc---CCCCEEEE
Confidence 588999999999999999999985 58999999999999988754 233578899998887765432 26999999
Q ss_pred ecccCccc
Q psy2376 483 DLGISSNQ 490 (896)
Q Consensus 483 dlG~ss~q 490 (896)
|--+|..-
T Consensus 322 D~Pcsg~g 329 (429)
T 1sqg_A 322 DAPCSATG 329 (429)
T ss_dssp ECCCCCGG
T ss_pred eCCCCccc
Confidence 98887653
No 22
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.74 E-value=7.3e-05 Score=85.54 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=64.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c-CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|++.|.||.|..+++..+..++|+|+|+++..++.+++. . -+++++++.+..++... ..-.++|.|+
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~fD~Vl 335 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI---IGEEVADKVL 335 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS---SCSSCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh---hccCCCCEEE
Confidence 588999999999999999999986668999999999999988754 1 24789999887765421 1113699999
Q ss_pred EecccCcc
Q psy2376 482 FDLGISSN 489 (896)
Q Consensus 482 ~dlG~ss~ 489 (896)
.|-=+|+.
T Consensus 336 ~D~Pcsg~ 343 (450)
T 2yxl_A 336 LDAPCTSS 343 (450)
T ss_dssp EECCCCCG
T ss_pred EcCCCCCC
Confidence 99877654
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.70 E-value=0.00023 Score=69.86 Aligned_cols=82 Identities=13% Similarity=0.057 Sum_probs=59.0
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELD 466 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~ 466 (896)
...+++.+..+ +++.++|.-+|.|..+..++++. +.++|+|+|+++++++.+++. ..+++ +++++..+
T Consensus 14 ~~~~~~~~~~~---~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-- 86 (178)
T 3hm2_A 14 RALAISALAPK---PHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-- 86 (178)
T ss_dssp HHHHHHHHCCC---TTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG--
T ss_pred HHHHHHHhccc---CCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh--
Confidence 34445555554 48899999999999999999997 578999999999999999764 23467 77666532
Q ss_pred HHHHhcCCCcccEEEE
Q psy2376 467 IILKKYNIKKIDGILF 482 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~ 482 (896)
.++.. .+++|.|+.
T Consensus 87 -~~~~~-~~~~D~i~~ 100 (178)
T 3hm2_A 87 -AFDDV-PDNPDVIFI 100 (178)
T ss_dssp -GGGGC-CSCCSEEEE
T ss_pred -hhhcc-CCCCCEEEE
Confidence 22221 135788874
No 24
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.59 E-value=0.0005 Score=66.87 Aligned_cols=74 Identities=20% Similarity=0.277 Sum_probs=55.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHH--HHh-cCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII--LKK-YNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-~~~~~~d~il~ 482 (896)
+++.++|..+|.|+.+..++++++++.+++|+|.++ +++. .++++++.+..+.+.. +.+ ..-.++|.|+.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------CcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 578999999999999999999987778999999998 5422 5788999888776421 111 12236899998
Q ss_pred eccc
Q psy2376 483 DLGI 486 (896)
Q Consensus 483 dlG~ 486 (896)
|.-.
T Consensus 95 ~~~~ 98 (180)
T 1ej0_A 95 DMAP 98 (180)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 7554
No 25
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.57 E-value=0.00035 Score=74.32 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=63.1
Q ss_pred HhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHHH
Q psy2376 395 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 395 ~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~l 469 (896)
+++.+... ++..++|+..|.|..+..++++++|.++|+++|+++++++.+++.. .+++++++.++.+. +
T Consensus 104 i~~~~~~~---~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 177 (277)
T 1o54_A 104 IAMMLDVK---EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---F 177 (277)
T ss_dssp HHHHTTCC---TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---C
T ss_pred HHHHhCCC---CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---c
Confidence 34444443 4889999999999999999999777889999999999999997641 25799999887654 2
Q ss_pred HhcCCCcccEEEEe
Q psy2376 470 KKYNIKKIDGILFD 483 (896)
Q Consensus 470 ~~~~~~~~d~il~d 483 (896)
.+ .++|.|+.|
T Consensus 178 ~~---~~~D~V~~~ 188 (277)
T 1o54_A 178 DE---KDVDALFLD 188 (277)
T ss_dssp SC---CSEEEEEEC
T ss_pred cC---CccCEEEEC
Confidence 21 258999875
No 26
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.56 E-value=0.00012 Score=78.20 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=57.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|+.+|.|+.|..++++.+ . +|+|+|+++++++.+++. ..+++++++++..++.. -.++|.|
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~------~~~fD~V 196 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------ENIADRI 196 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC------CSCEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc------cCCccEE
Confidence 488999999999999999999863 3 899999999999998763 34679999998766543 2368999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 197 i~~ 199 (278)
T 2frn_A 197 LMG 199 (278)
T ss_dssp EEC
T ss_pred EEC
Confidence 885
No 27
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.56 E-value=0.00028 Score=72.87 Aligned_cols=77 Identities=14% Similarity=0.213 Sum_probs=61.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|..+|.|..+..+++..+ .++|+++|+++++++.+++. ..+++++++++..+....+.. -.++|.|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~--~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL--YPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT--SCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc--CCCccEE
Confidence 378999999999999999999984 68999999999999999764 236899999988774333311 1268999
Q ss_pred EEecc
Q psy2376 481 LFDLG 485 (896)
Q Consensus 481 l~dlG 485 (896)
+.|.+
T Consensus 131 ~~~~~ 135 (233)
T 2gpy_A 131 FIDAA 135 (233)
T ss_dssp EEEGG
T ss_pred EECCC
Confidence 98765
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.50 E-value=0.00027 Score=72.88 Aligned_cols=83 Identities=14% Similarity=0.249 Sum_probs=63.7
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHHHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDIILK 470 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 470 (896)
+.+++.+... .++..++|.-+|.|..+..++++. |..+++|+|.++++++.+++.. ..+++++++++.+++.
T Consensus 33 ~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~--- 106 (234)
T 3dtn_A 33 GVSVSIASVD--TENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDF--- 106 (234)
T ss_dssp HHHHHTCCCS--CSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCC---
T ss_pred HHHHHHhhcC--CCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCC---
Confidence 4444555422 357899999999999999999998 5689999999999999998753 2379999998876531
Q ss_pred hcCCCcccEEEEec
Q psy2376 471 KYNIKKIDGILFDL 484 (896)
Q Consensus 471 ~~~~~~~d~il~dl 484 (896)
. .++|.|+.+.
T Consensus 107 --~-~~fD~v~~~~ 117 (234)
T 3dtn_A 107 --E-EKYDMVVSAL 117 (234)
T ss_dssp --C-SCEEEEEEES
T ss_pred --C-CCceEEEEeC
Confidence 1 3688888753
No 29
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.47 E-value=0.00076 Score=66.61 Aligned_cols=70 Identities=24% Similarity=0.353 Sum_probs=55.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|..+|.|..+..+++.. .+++|+|.++++++.+++. ..+++++++.+..+ .+.+. +++|.|
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~--~~~D~v 104 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE---ALCKI--PDIDIA 104 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH---HHTTS--CCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH---hcccC--CCCCEE
Confidence 58899999999999999999876 6999999999999998764 12688998887654 23332 268888
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.+
T Consensus 105 ~~~ 107 (192)
T 1l3i_A 105 VVG 107 (192)
T ss_dssp EES
T ss_pred EEC
Confidence 764
No 30
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.46 E-value=0.0015 Score=65.36 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=50.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH------HHHHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL------DIILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~~d~ 479 (896)
++..++|..+|.|+-|..++++ .++|+|+|+++.+ ...+++++++++.+. .+.+.+.+..++|.
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 5899999999999999999997 5799999999752 125788998887653 22233111126888
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+-|.
T Consensus 95 Vlsd~ 99 (191)
T 3dou_A 95 VVSDA 99 (191)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 88863
No 31
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.45 E-value=0.00015 Score=76.38 Aligned_cols=77 Identities=19% Similarity=0.102 Sum_probs=60.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCH-------HHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcC
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDT-------ESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYN 473 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~-------~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~ 473 (896)
+++.++|+|+|.|.+|..++++ .++|+|+|+++ ++++.+++. ..+|+++++++..++...+.+.+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 4789999999999999999986 36899999999 999988753 24679999999987654443200
Q ss_pred CCcccEEEEeccc
Q psy2376 474 IKKIDGILFDLGI 486 (896)
Q Consensus 474 ~~~~d~il~dlG~ 486 (896)
.++|.|++|-..
T Consensus 160 -~~fD~V~~dP~~ 171 (258)
T 2r6z_A 160 -GKPDIVYLDPMY 171 (258)
T ss_dssp -CCCSEEEECCCC
T ss_pred -CCccEEEECCCC
Confidence 158999988644
No 32
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.44 E-value=0.00044 Score=69.74 Aligned_cols=70 Identities=14% Similarity=0.047 Sum_probs=54.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|.-+|.|..+..+.+. +..+++|+|+++++++.+++.. .+++++++.+..+.. -+++|.|+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~~fD~i~ 130 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-------DGKFDLIV 130 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-------CSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-------CCCceEEE
Confidence 4789999999999999997764 4569999999999999997641 123889988875531 13689998
Q ss_pred Eec
Q psy2376 482 FDL 484 (896)
Q Consensus 482 ~dl 484 (896)
.|.
T Consensus 131 ~~~ 133 (205)
T 3grz_A 131 ANI 133 (205)
T ss_dssp EES
T ss_pred ECC
Confidence 874
No 33
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.41 E-value=0.00026 Score=73.02 Aligned_cols=84 Identities=11% Similarity=0.114 Sum_probs=65.7
Q ss_pred hhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHHHHHHhcC
Q psy2376 396 INWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDIILKKYN 473 (896)
Q Consensus 396 l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~ 473 (896)
++.+.++ ||..++|.-+|.|..+..+.+.++|+|+|||+|.++++++.+++.. ..++..+.....+..++- ..
T Consensus 70 l~~l~ik---pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~--~~ 144 (233)
T 4df3_A 70 LIELPVK---EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYR--HL 144 (233)
T ss_dssp CSCCCCC---TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGT--TT
T ss_pred hhhcCCC---CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccc--cc
Confidence 3445554 5999999999999999999999999999999999999998887653 356888888776655432 12
Q ss_pred CCcccEEEEec
Q psy2376 474 IKKIDGILFDL 484 (896)
Q Consensus 474 ~~~~d~il~dl 484 (896)
...+|.|+.|+
T Consensus 145 ~~~vDvVf~d~ 155 (233)
T 4df3_A 145 VEGVDGLYADV 155 (233)
T ss_dssp CCCEEEEEECC
T ss_pred cceEEEEEEec
Confidence 24688887654
No 34
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.41 E-value=0.00072 Score=71.82 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=60.3
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHH
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~ 468 (896)
.+++.+..+ ++..++|.-+|.|+.+..+++..+|.++|+|+|+++++++.+++.. .+++++++++..+.
T Consensus 101 ~~~~~~~~~---~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--- 174 (275)
T 1yb2_A 101 YIIMRCGLR---PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--- 174 (275)
T ss_dssp -----CCCC---TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---
T ss_pred HHHHHcCCC---CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---
Confidence 444555554 4889999999999999999999767789999999999999997642 25799999887651
Q ss_pred HHhcCCCcccEEEEe
Q psy2376 469 LKKYNIKKIDGILFD 483 (896)
Q Consensus 469 l~~~~~~~~d~il~d 483 (896)
+. -.++|.|+.|
T Consensus 175 ~~---~~~fD~Vi~~ 186 (275)
T 1yb2_A 175 IS---DQMYDAVIAD 186 (275)
T ss_dssp CC---SCCEEEEEEC
T ss_pred Cc---CCCccEEEEc
Confidence 11 1368999874
No 35
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.40 E-value=0.00038 Score=70.24 Aligned_cols=84 Identities=11% Similarity=0.133 Sum_probs=60.7
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDI 467 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~ 467 (896)
.+.+++.+...+..+++.++|..+|.|..+..+++.. |..+++|+|.++++++.+++.. -+++++++.+..+..
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 128 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP- 128 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-
Confidence 3444554443211137899999999999999999987 5689999999999999987641 134889988886543
Q ss_pred HHHhcCCCcccEEEE
Q psy2376 468 ILKKYNIKKIDGILF 482 (896)
Q Consensus 468 ~l~~~~~~~~d~il~ 482 (896)
. ..++|.|+.
T Consensus 129 --~---~~~~D~i~~ 138 (207)
T 1jsx_A 129 --S---EPPFDGVIS 138 (207)
T ss_dssp --C---CSCEEEEEC
T ss_pred --c---cCCcCEEEE
Confidence 1 135788775
No 36
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.40 E-value=0.00055 Score=70.35 Aligned_cols=72 Identities=10% Similarity=0.063 Sum_probs=56.5
Q ss_pred cCcEEEEEccC-CChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFG-QGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G-~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|..+| .|..+..++++. ..+|+|+|+|+++++.+++. ...++++++++...+...- -.++|.|+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~~fD~I~ 128 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV----EGTFDVIF 128 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC----CSCEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc----cCceeEEE
Confidence 48899999999 999999999986 56999999999999999764 2237899988854332211 13689998
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.|
T Consensus 129 ~n 130 (230)
T 3evz_A 129 SA 130 (230)
T ss_dssp EC
T ss_pred EC
Confidence 77
No 37
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.37 E-value=0.00024 Score=72.92 Aligned_cols=87 Identities=17% Similarity=0.082 Sum_probs=63.8
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---------CCCeEEEccChhc
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---------DSRFSIIHNCFTE 464 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---------~~~~~~~~~~~~~ 464 (896)
.+++.+.... +++..++|..+|.|+.+..+++..+++++|+|+|+++.+++.+++.. .+++++++.+..+
T Consensus 66 ~~l~~l~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 66 YALELLFDQL-HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHTTTTS-CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHhhC-CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 4445544111 35889999999999999999999877789999999999999987542 3578888887653
Q ss_pred HHHHHHhcCCCcccEEEEeccc
Q psy2376 465 LDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 465 ~~~~l~~~~~~~~d~il~dlG~ 486 (896)
.. .. ..++|.|+.|..+
T Consensus 145 ~~---~~--~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 145 GY---AE--EAPYDAIHVGAAA 161 (226)
T ss_dssp CC---GG--GCCEEEEEECSBB
T ss_pred Cc---cc--CCCcCEEEECCch
Confidence 21 11 1258988877654
No 38
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.34 E-value=0.00058 Score=71.33 Aligned_cols=44 Identities=20% Similarity=0.053 Sum_probs=38.7
Q ss_pred cCcEEEEEccCCChhHHHHHHH--cCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 406 INGIYIDATFGQGGHSCKILER--LGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~--~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
++..++|..+|.|..+..++++ . +..+|+|+|+|+++++.|++.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~ 96 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKN 96 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHH
Confidence 3678999999999999999998 4 457999999999999999753
No 39
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.31 E-value=9.5e-05 Score=77.75 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=61.0
Q ss_pred hHHHhhhccccccccC--cEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHH-------HHHhhcc------cCCCeE
Q psy2376 392 LNEAINWLNIENERIN--GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTES-------VSLGNKI------TDSRFS 456 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~--~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a-------~~~~~~~------~~~~~~ 456 (896)
.+.+.+.+..+ ++ ..++|+|+|.|.++..++++ .++|+++|+|+.. ++.+++. ..+|++
T Consensus 75 ~e~l~~al~l~---~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~ 148 (258)
T 2oyr_A 75 GEAVAKAVGIK---GDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQ 148 (258)
T ss_dssp GSHHHHHTTCB---TTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEE
T ss_pred HHHHHHHhccc---CCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEE
Confidence 34455555544 25 89999999999999999998 3579999999964 5444321 125799
Q ss_pred EEccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 457 IIHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 457 ~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+++++..++ ++... .++|.|++|-+.
T Consensus 149 ~~~~D~~~~---L~~~~-~~fDvV~lDP~y 174 (258)
T 2oyr_A 149 LIHASSLTA---LTDIT-PRPQVVYLDPMF 174 (258)
T ss_dssp EEESCHHHH---STTCS-SCCSEEEECCCC
T ss_pred EEECCHHHH---HHhCc-ccCCEEEEcCCC
Confidence 999998664 33221 258999999766
No 40
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.29 E-value=0.00064 Score=69.59 Aligned_cols=80 Identities=20% Similarity=0.109 Sum_probs=63.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhc-CCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKY-NIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~-~~~~~d~ 479 (896)
+++.++|..+|.|..|..+++++++.++|+|+|+++++++.+++. ..+++++++++..+....+... ...++|.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 367999999999999999999997789999999999999999764 3467999999876544333321 1136999
Q ss_pred EEEecc
Q psy2376 480 ILFDLG 485 (896)
Q Consensus 480 il~dlG 485 (896)
|++|..
T Consensus 144 v~~~~~ 149 (225)
T 3tr6_A 144 IYIDAD 149 (225)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 997663
No 41
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.26 E-value=0.0012 Score=67.08 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=62.3
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhc
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (896)
.++++.+..+ +++.++|.-+|.|..+..++++ ..+++|+|.++++++.+++...++++++++++.+++.
T Consensus 35 ~~~l~~~~~~---~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~----- 103 (220)
T 3hnr_A 35 EDILEDVVNK---SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEV----- 103 (220)
T ss_dssp HHHHHHHHHT---CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCC-----
T ss_pred HHHHHHhhcc---CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCC-----
Confidence 4566666554 4889999999999999999997 4689999999999999987655688888888876531
Q ss_pred CCCcccEEEEe
Q psy2376 473 NIKKIDGILFD 483 (896)
Q Consensus 473 ~~~~~d~il~d 483 (896)
. .++|.|+.+
T Consensus 104 ~-~~fD~v~~~ 113 (220)
T 3hnr_A 104 P-TSIDTIVST 113 (220)
T ss_dssp C-SCCSEEEEE
T ss_pred C-CCeEEEEEC
Confidence 1 367888765
No 42
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.26 E-value=0.0031 Score=70.70 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=58.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|+.+|.|+.|..+++. + ..+|+|+|+++++++.+++. .++++++++++..+....+...+ .++|.|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~-~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKG-EKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTT-CCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhC-CCCCEE
Confidence 3789999999999999999986 2 45999999999999999764 22389999998766544333211 268999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
++|
T Consensus 294 i~d 296 (396)
T 2as0_A 294 VLD 296 (396)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
No 43
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.21 E-value=0.0029 Score=70.70 Aligned_cols=69 Identities=22% Similarity=0.254 Sum_probs=51.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|+.+|.|+.|..+++. + .+|+|+|+++.+++.+++. ..++ +.+ .+..+.++...- ++|.|
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-g--a~V~avDis~~al~~a~~n~~~ng~~~~--~~~---~D~~~~l~~~~~-~fD~I 284 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-G--AYALAVDKDLEALGVLDQAALRLGLRVD--IRH---GEALPTLRGLEG-PFHHV 284 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCCCE--EEE---SCHHHHHHTCCC-CEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHhCCCCc--EEE---ccHHHHHHHhcC-CCCEE
Confidence 4889999999999999999986 2 3599999999999999764 2233 333 344455544322 38999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
++|
T Consensus 285 i~d 287 (393)
T 4dmg_A 285 LLD 287 (393)
T ss_dssp EEC
T ss_pred EEC
Confidence 976
No 44
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.20 E-value=0.0033 Score=62.88 Aligned_cols=52 Identities=27% Similarity=0.291 Sum_probs=42.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 464 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~ 464 (896)
++..++|..+|.|+.|..++++.++ .++|+|+|+++.+ ..++++++++++.+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-------~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-------PIPNVYFIQGEIGK 74 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-------CCTTCEEEECCTTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-------CCCCceEEEccccc
Confidence 4789999999999999999999864 6899999999842 12457777776644
No 45
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.12 E-value=0.0012 Score=70.11 Aligned_cols=83 Identities=19% Similarity=0.203 Sum_probs=65.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c-CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|+..|.|+.|..+++..+..++|+|+|+++.+++.+++. . -+++++++.+..++...+... ..++|.|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~-~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKN-EIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHT-TCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhc-cccCCEEE
Confidence 588999999999999999999986668999999999999988764 1 247999999988876544211 12699999
Q ss_pred EecccCcc
Q psy2376 482 FDLGISSN 489 (896)
Q Consensus 482 ~dlG~ss~ 489 (896)
.|-=+|+.
T Consensus 162 ~d~Pcs~~ 169 (274)
T 3ajd_A 162 LDAPCSGN 169 (274)
T ss_dssp EEECCC--
T ss_pred EcCCCCCC
Confidence 99766654
No 46
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.12 E-value=0.0014 Score=72.01 Aligned_cols=79 Identities=16% Similarity=0.152 Sum_probs=63.2
Q ss_pred ccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc----------cCCCeEEEccChhcHHHHHHhcCC
Q psy2376 405 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI----------TDSRFSIIHNCFTELDIILKKYNI 474 (896)
Q Consensus 405 ~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~ 474 (896)
+||..++|++.|-||-|..|++.. ++++|+|.|+++.-++..++. ..+++.+.+.+...+.+...+
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~--- 222 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD--- 222 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT---
T ss_pred CCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc---
Confidence 369999999999999999999975 568999999999987765432 125688888887777654332
Q ss_pred CcccEEEEecccCc
Q psy2376 475 KKIDGILFDLGISS 488 (896)
Q Consensus 475 ~~~d~il~dlG~ss 488 (896)
.+|.||.|-=+|.
T Consensus 223 -~fD~VLlDaPCSg 235 (359)
T 4fzv_A 223 -TYDRVLVDVPCTT 235 (359)
T ss_dssp -CEEEEEEECCCCC
T ss_pred -cCCEEEECCccCC
Confidence 6999999999985
No 47
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.10 E-value=0.00093 Score=72.55 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=65.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|+..|.|+.|..+++..++.++|+|+|+++.+++.+++.. -.++++++.+..++.. . -.++|.|+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~----~~~fD~Il 192 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-L----NVEFDKIL 192 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-G----CCCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-c----cccCCEEE
Confidence 5889999999999999999999877789999999999999887642 2479999999887654 1 12699999
Q ss_pred EecccCcc
Q psy2376 482 FDLGISSN 489 (896)
Q Consensus 482 ~dlG~ss~ 489 (896)
.|-=+|+.
T Consensus 193 ~d~Pcsg~ 200 (315)
T 1ixk_A 193 LDAPCTGS 200 (315)
T ss_dssp EECCTTST
T ss_pred EeCCCCCc
Confidence 99776654
No 48
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.08 E-value=0.00065 Score=69.55 Aligned_cols=78 Identities=15% Similarity=0.335 Sum_probs=62.0
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHH-hcCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILK-KYNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~-~~~~~~~d~i 480 (896)
++.++|.-+|.|..|..+++.++++++|+|+|+++++++.|++. ..+|+++++++..+....+. +.+..++|.|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 67999999999999999999987789999999999999999764 34689999998765322222 1122479999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|-
T Consensus 139 ~~d~ 142 (221)
T 3u81_A 139 FLDH 142 (221)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9873
No 49
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.07 E-value=0.00096 Score=69.25 Aligned_cols=74 Identities=14% Similarity=0.035 Sum_probs=56.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c-CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|.-+|.|..+..+++.. +.++|+|+|.++++++.+++. . -+++++++++..++... .. .-.++|.|+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~-~~~~fD~V~ 146 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-KD-VRESYDIVT 146 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-TT-TTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-cc-ccCCccEEE
Confidence 47899999999999999999875 568999999999999998763 1 23699999987665310 00 013689988
Q ss_pred E
Q psy2376 482 F 482 (896)
Q Consensus 482 ~ 482 (896)
.
T Consensus 147 ~ 147 (240)
T 1xdz_A 147 A 147 (240)
T ss_dssp E
T ss_pred E
Confidence 5
No 50
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.06 E-value=0.0013 Score=67.84 Aligned_cols=76 Identities=8% Similarity=0.071 Sum_probs=58.6
Q ss_pred ccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHH----HHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 405 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV----SLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 405 ~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+||..++|..+|.|+.|..+++..+++|+|+|+|.++..+ +.++++ .++++++++..+...+... .+++|.|
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~--~~~~D~I 150 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSV--VENVDVL 150 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTT--CCCEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhcc--ccceEEE
Confidence 4699999999999999999999999899999999999775 334332 5788888877654322111 2369999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|.
T Consensus 151 ~~d~ 154 (232)
T 3id6_C 151 YVDI 154 (232)
T ss_dssp EECC
T ss_pred EecC
Confidence 9884
No 51
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.06 E-value=0.00045 Score=72.06 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=62.2
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHH-HhcCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIIL-KKYNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l-~~~~~~~~d~i 480 (896)
++.++|..+|.|..|..+++.++++++|+|+|+++++++.|++. ..+|+++++++..+....+ ++...+++|.|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 67999999999999999999997789999999999999888764 3468999999986654433 22112369999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 141 ~~d 143 (242)
T 3r3h_A 141 FID 143 (242)
T ss_dssp EEE
T ss_pred EEc
Confidence 987
No 52
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.04 E-value=0.0018 Score=67.13 Aligned_cols=77 Identities=17% Similarity=0.062 Sum_probs=62.1
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcC--CCcccE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYN--IKKIDG 479 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~--~~~~d~ 479 (896)
++.++|...|.|+.+..+++.++++++|+++|++++.++.+++. ..+|+++++++..+...-+.+.+ ..++|.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 57899999999999999999997789999999999999999764 24689999988766543343222 246999
Q ss_pred EEEe
Q psy2376 480 ILFD 483 (896)
Q Consensus 480 il~d 483 (896)
|+.|
T Consensus 151 I~~d 154 (237)
T 3c3y_A 151 GFVD 154 (237)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 53
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.04 E-value=0.0013 Score=74.91 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=66.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
++..++|++.|.||-|..+++..++.++|+|+|+++++++.+++. .+-.+++++.+..++.+...+ ++|.|+.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~----~FD~Il~ 176 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGT----YFHRVLL 176 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCS----CEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccc----cCCEEEE
Confidence 589999999999999999999998779999999999999988764 222288999988887765432 6999999
Q ss_pred ecccCc
Q psy2376 483 DLGISS 488 (896)
Q Consensus 483 dlG~ss 488 (896)
|-=+|+
T Consensus 177 D~PcSg 182 (464)
T 3m6w_A 177 DAPCSG 182 (464)
T ss_dssp ECCCCC
T ss_pred CCCcCC
Confidence 987774
No 54
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.03 E-value=0.0013 Score=64.49 Aligned_cols=85 Identities=14% Similarity=0.198 Sum_probs=62.9
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~ 465 (896)
..+.+++.+... .+++.++|..+|.|..+..++++ +..+|+|+|.++++++.+++.. .+++++++++..+.
T Consensus 18 ~~~~~~~~l~~~--~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 18 VRGAIFNMIGPY--FNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp CHHHHHHHHCSC--CCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHHhh--cCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 344555555521 24789999999999999999987 3469999999999999997642 35799999988764
Q ss_pred HHHHHhcCCCcccEEEEe
Q psy2376 466 DIILKKYNIKKIDGILFD 483 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~d 483 (896)
.. ... +++|.|+.|
T Consensus 94 ~~---~~~-~~fD~i~~~ 107 (177)
T 2esr_A 94 ID---CLT-GRFDLVFLD 107 (177)
T ss_dssp HH---HBC-SCEEEEEEC
T ss_pred HH---hhc-CCCCEEEEC
Confidence 32 211 258998876
No 55
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.02 E-value=0.0016 Score=66.79 Aligned_cols=77 Identities=14% Similarity=0.115 Sum_probs=59.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|..+|.|..+..+++++++.++|+|+|.++++++.+++.. .++++++++++.+...+. ... +++|.|+.|
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~-~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYR-ALV-PKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGT-TTC-CCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhh-ccc-CCceEEEEC
Confidence 5889999999999999999999877789999999998887765431 268999999887643211 111 268999866
Q ss_pred c
Q psy2376 484 L 484 (896)
Q Consensus 484 l 484 (896)
.
T Consensus 151 ~ 151 (227)
T 1g8a_A 151 V 151 (227)
T ss_dssp C
T ss_pred C
Confidence 4
No 56
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.02 E-value=0.00093 Score=73.19 Aligned_cols=86 Identities=21% Similarity=0.354 Sum_probs=64.4
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---------------CCCeEE
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---------------DSRFSI 457 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---------------~~~~~~ 457 (896)
..+++.+... ++..++|.-+|.|..+..+++..+++++|+|+|+++++++.|++.. .+++++
T Consensus 95 ~~~l~~l~~~---~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 95 NMILSMMDIN---PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHHHHHTCC---TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHHHhcCCC---CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 4445555554 4889999999999999999999878889999999999999997642 268999
Q ss_pred EccChhcHHHHHHhcCCCcccEEEEec
Q psy2376 458 IHNCFTELDIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 458 ~~~~~~~~~~~l~~~~~~~~d~il~dl 484 (896)
++++..+...-+.+ .++|.|+.|.
T Consensus 172 ~~~d~~~~~~~~~~---~~fD~V~~~~ 195 (336)
T 2b25_A 172 IHKDISGATEDIKS---LTFDAVALDM 195 (336)
T ss_dssp EESCTTCCC----------EEEEEECS
T ss_pred EECChHHcccccCC---CCeeEEEECC
Confidence 99988765322222 2589999864
No 57
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.02 E-value=0.00098 Score=69.66 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=62.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcC-CCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYN-IKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~-~~~~d~ 479 (896)
+++.++|..+|.|+.+..+++.++++++|+|+|+++++++.+++. ..+|+++++++..+. +.... ..++|.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS---LESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH---HHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH---HHhcCCCCCeEE
Confidence 478999999999999999999997789999999999999999764 246899999987653 33322 236999
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+.|.
T Consensus 140 V~~d~ 144 (248)
T 3tfw_A 140 IFIDA 144 (248)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99875
No 58
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.97 E-value=0.0016 Score=64.72 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=58.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C-CCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D-SRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|..+|.|..+..++++ +..+|+|+|+|+++++.+++.. + +++++++++..++...+ .-.++|.|+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~~fD~i~ 118 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAG---TTSPVDLVL 118 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHC---CSSCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhc---cCCCccEEE
Confidence 4789999999999999988885 3568999999999999997641 1 58999999987764322 224699998
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.|
T Consensus 119 ~~ 120 (189)
T 3p9n_A 119 AD 120 (189)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 59
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.97 E-value=0.011 Score=58.78 Aligned_cols=71 Identities=14% Similarity=0.077 Sum_probs=51.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCC--------cEEEEEeCCHHHHHHhhcccCCCeEEE-ccChhcHHH--HH-HhcC
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKK--------GRLIAIDKDTESVSLGNKITDSRFSII-HNCFTELDI--IL-KKYN 473 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~--------~~~~~~D~d~~a~~~~~~~~~~~~~~~-~~~~~~~~~--~l-~~~~ 473 (896)
+++.++|.-+|.|+.+..++++.++. ++|+|+|+++.+ . .++++++ +.++.+.+. .+ ....
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~--~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----P--LEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----C--CTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----c--CCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 48899999999999999999998653 899999999842 1 2467888 887765432 11 1111
Q ss_pred CCcccEEEEe
Q psy2376 474 IKKIDGILFD 483 (896)
Q Consensus 474 ~~~~d~il~d 483 (896)
-.++|.|+.|
T Consensus 95 ~~~fD~V~~~ 104 (196)
T 2nyu_A 95 GRRADVILSD 104 (196)
T ss_dssp GGCEEEEEEC
T ss_pred CCCCcEEEeC
Confidence 1258888875
No 60
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.96 E-value=0.0021 Score=65.43 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=60.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|.-+|.|.++..++++. |+.+++|+|+++++++.|++.. -+++++++++..++.+++.+ ..+|.|.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~---~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEP---GEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCT---TSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCc---CCcCEEE
Confidence 47899999999999999999997 5789999999999999987641 25799999999887665433 2588887
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.+
T Consensus 114 ~~ 115 (213)
T 2fca_A 114 LN 115 (213)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 61
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.94 E-value=0.0015 Score=67.32 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=60.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHH-HHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDI-ILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~-~l~~~~~~~~d~ 479 (896)
+++.++|..+|.|..+..+++.. +.++|+|+|+++++++.|++. ..+|+++++++..+... .+. .++|.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~----~~fD~ 145 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVND----KVYDM 145 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTT----SCEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhcc----CCccE
Confidence 37899999999999999999965 578999999999999999764 23689999999876533 332 26999
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+.|.
T Consensus 146 V~~~~ 150 (232)
T 3ntv_A 146 IFIDA 150 (232)
T ss_dssp EEEET
T ss_pred EEEcC
Confidence 99873
No 62
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.94 E-value=0.0024 Score=62.89 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=59.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|..+|.|..+..++++ +..+|+|+|.++++++.+++. ..++++++++++.+....+... -.++|.|
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~fD~i 120 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE-KLQFDLV 120 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT-TCCEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc-CCCCCEE
Confidence 4789999999999999998884 356999999999999999764 2368999999987755433211 1368999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 121 ~~~ 123 (187)
T 2fhp_A 121 LLD 123 (187)
T ss_dssp EEC
T ss_pred EEC
Confidence 876
No 63
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.86 E-value=0.0035 Score=65.37 Aligned_cols=83 Identities=16% Similarity=0.259 Sum_probs=65.0
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHH
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~ 468 (896)
.+++.+..+ +++.++|+.+|.|..+..+++.++|.++|+++|.++++++.+++.. .+++++++.++.+.+
T Consensus 87 ~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~-- 161 (258)
T 2pwy_A 87 AMVTLLDLA---PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE-- 161 (258)
T ss_dssp HHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC--
T ss_pred HHHHHcCCC---CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--
Confidence 445555543 5889999999999999999999877889999999999999997642 267999998876541
Q ss_pred HHhcCCCcccEEEEec
Q psy2376 469 LKKYNIKKIDGILFDL 484 (896)
Q Consensus 469 l~~~~~~~~d~il~dl 484 (896)
..-.++|.|+.|.
T Consensus 162 ---~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 162 ---LEEAAYDGVALDL 174 (258)
T ss_dssp ---CCTTCEEEEEEES
T ss_pred ---CCCCCcCEEEECC
Confidence 1113699999863
No 64
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.83 E-value=0.0014 Score=66.54 Aligned_cols=74 Identities=15% Similarity=0.175 Sum_probs=60.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|.-+|.|..+..++++. |+.+++|+|+++++++.+++.. -+++++++++..++.+.+.+ .++|.|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~---~~~D~i~ 116 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFED---GEIDRLY 116 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCT---TCCSEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCC---CCCCEEE
Confidence 47899999999999999999998 4789999999999999987641 26899999998876543322 3689999
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.+
T Consensus 117 ~~ 118 (214)
T 1yzh_A 117 LN 118 (214)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 65
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.83 E-value=0.0017 Score=66.71 Aligned_cols=75 Identities=16% Similarity=0.141 Sum_probs=60.9
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cC-CCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TD-SRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~-~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+..++|.-.|.|.-|..+++.++++++|+++|+++++++.|++. .. +|+++++++..+. ++...-+++|.|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~---l~~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV---MSRLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---GGGSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH---HHHhcCCCcCeE
Confidence 55889999999999999999998889999999999999999764 23 6899999887554 333212369999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|-
T Consensus 134 ~~d~ 137 (221)
T 3dr5_A 134 FGQV 137 (221)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9874
No 66
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.81 E-value=0.0032 Score=66.91 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=62.1
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDI 467 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~ 467 (896)
...++++.+... +++.++|.-+|.|..+..++++ ..+|+|+|+++.+++.+++.. ..++++++.+..+...
T Consensus 108 ~~~~~~~~~~~~---~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 181 (286)
T 3m70_A 108 IHGDVVDAAKII---SPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI 181 (286)
T ss_dssp CCHHHHHHHHHS---CSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC
T ss_pred hHHHHHHHhhcc---CCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc
Confidence 345556655543 4789999999999999999987 348999999999999997642 2378888888766432
Q ss_pred HHHhcCCCcccEEEEec
Q psy2376 468 ILKKYNIKKIDGILFDL 484 (896)
Q Consensus 468 ~l~~~~~~~~d~il~dl 484 (896)
-.++|.|+.+.
T Consensus 182 ------~~~fD~i~~~~ 192 (286)
T 3m70_A 182 ------QENYDFIVSTV 192 (286)
T ss_dssp ------CSCEEEEEECS
T ss_pred ------cCCccEEEEcc
Confidence 23688888754
No 67
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.80 E-value=0.0033 Score=64.99 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=61.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcH-HHHHHh--------
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTEL-DIILKK-------- 471 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~-~~~l~~-------- 471 (896)
+++.++|..+|.|..+..+++..++.++|+++|+++++++.+++. ..+++++++++..+. ++...+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 377999999999999999999987678999999999999999764 235799999987664 332221
Q ss_pred -cCC--CcccEEEEec
Q psy2376 472 -YNI--KKIDGILFDL 484 (896)
Q Consensus 472 -~~~--~~~d~il~dl 484 (896)
+.- .++|.|+.|.
T Consensus 140 ~f~~~~~~fD~I~~~~ 155 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDA 155 (239)
T ss_dssp TTCCSTTCEEEEEECS
T ss_pred cccCCCCCcCEEEEeC
Confidence 000 3689999873
No 68
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.78 E-value=0.0021 Score=66.48 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=57.0
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEE-ccChhcHHHHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSII-HNCFTELDIILK 470 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 470 (896)
+++.++.+...+ ++..++|.-+|.|+.|..++++ + ..+|+|+|+++++++.+++. ..++... ..|+..+.. .
T Consensus 25 L~~~L~~~~~~~--~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~-~~~~~~~~~~~~~~~~~--~ 97 (232)
T 3opn_A 25 LEKALKEFHLEI--NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRS-DERVVVMEQFNFRNAVL--A 97 (232)
T ss_dssp HHHHHHHTTCCC--TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHT-CTTEEEECSCCGGGCCG--G
T ss_pred HHHHHHHcCCCC--CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHh-CccccccccceEEEeCH--h
Confidence 456666665532 4679999999999999999997 3 24999999999999887553 2344322 234433220 1
Q ss_pred hcCCCcccEEEEecccCc
Q psy2376 471 KYNIKKIDGILFDLGISS 488 (896)
Q Consensus 471 ~~~~~~~d~il~dlG~ss 488 (896)
+.....+|.+.+|+=+++
T Consensus 98 ~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp GCCSCCCSEEEECCSSSC
T ss_pred HcCcCCCCEEEEEEEhhh
Confidence 111112466667665444
No 69
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.78 E-value=0.0039 Score=68.43 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=54.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCC----cEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKK----GRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~----~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++..++|.++|.|+-+..+++..+.. .+++|+|+|+.+++.|+.. .+.++.+++++.-+- ....++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~------~~~~~fD 203 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN------LLVDPVD 203 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC------CCCCCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc------cccCCcc
Confidence 36799999999999999999998543 7999999999999999753 233577777764321 1123577
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 204 ~Ii~NP 209 (344)
T 2f8l_A 204 VVISDL 209 (344)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 777764
No 70
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.76 E-value=0.0039 Score=65.13 Aligned_cols=74 Identities=9% Similarity=-0.077 Sum_probs=56.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c-CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|.-.|.|..+..++... |+++|+|+|.++++++.+++. . -+++++++++..++... ...-.++|.|+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~--~~~~~~fD~I~ 156 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE--AGHREAYARAV 156 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS--TTTTTCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc--cccCCCceEEE
Confidence 57899999999999999999987 578999999999999998763 1 24599999987665320 00113688886
Q ss_pred E
Q psy2376 482 F 482 (896)
Q Consensus 482 ~ 482 (896)
.
T Consensus 157 s 157 (249)
T 3g89_A 157 A 157 (249)
T ss_dssp E
T ss_pred E
Confidence 3
No 71
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.75 E-value=0.004 Score=65.89 Aligned_cols=84 Identities=12% Similarity=0.267 Sum_probs=65.7
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-------CCCeEEEccChhcH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-------DSRFSIIHNCFTEL 465 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-------~~~~~~~~~~~~~~ 465 (896)
..+++.+..+ ++..++|.-+|.|..+..++++++|.++|+++|+++++++.+++.. .+++++++.+..+.
T Consensus 89 ~~i~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 89 AQIVHEGDIF---PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHcCCC---CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 3455555554 4889999999999999999998877889999999999999987642 36899999988664
Q ss_pred HHHHHhcCCCcccEEEEec
Q psy2376 466 DIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~dl 484 (896)
. ..-.++|.|+.|.
T Consensus 166 ~-----~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 166 E-----LPDGSVDRAVLDM 179 (280)
T ss_dssp C-----CCTTCEEEEEEES
T ss_pred C-----CCCCceeEEEECC
Confidence 2 1123689999864
No 72
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.75 E-value=0.0029 Score=65.99 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=61.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcC--CCcccE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYN--IKKIDG 479 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~--~~~~d~ 479 (896)
++.++|.-.|.|..+..+++.++++++|+++|+++++++.+++. ..+|+++++++..+....+.+.+ -.++|.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 57899999999999999999997789999999999999999764 24689999998766433332211 236999
Q ss_pred EEEe
Q psy2376 480 ILFD 483 (896)
Q Consensus 480 il~d 483 (896)
|+.|
T Consensus 160 V~~d 163 (247)
T 1sui_A 160 IFVD 163 (247)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9987
No 73
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.74 E-value=0.0014 Score=66.06 Aligned_cols=87 Identities=16% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC---CCeEEEccChhcHHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD---SRFSIIHNCFTELDIIL 469 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~---~~~~~~~~~~~~~~~~l 469 (896)
+.+++.+... +++..++|..+|.|..+..++++. ++++++|+|+++++++.+++... .+++++++++.+ .+
T Consensus 19 ~~~~~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~---~~ 92 (215)
T 4dzr_A 19 EEAIRFLKRM--PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE---WL 92 (215)
T ss_dssp HHHHHHHTTC--CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHHH---HH
T ss_pred HHHHHHhhhc--CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh---hh
Confidence 4444444431 248899999999999999999997 57899999999999999976532 267777777655 23
Q ss_pred Hh--cCCCcccEEEEecc
Q psy2376 470 KK--YNIKKIDGILFDLG 485 (896)
Q Consensus 470 ~~--~~~~~~d~il~dlG 485 (896)
.+ ....++|.|+.|.-
T Consensus 93 ~~~~~~~~~fD~i~~npp 110 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPP 110 (215)
T ss_dssp HHHHHTTCCBSEEEECCC
T ss_pred hhhhhccCcccEEEECCC
Confidence 22 11236999998743
No 74
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.74 E-value=0.0033 Score=66.08 Aligned_cols=77 Identities=12% Similarity=0.198 Sum_probs=61.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC--------CCeEEEccChhcHH-HHHHh-cCCC
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--------SRFSIIHNCFTELD-IILKK-YNIK 475 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~--------~~~~~~~~~~~~~~-~~l~~-~~~~ 475 (896)
+++.++|...|.|..+..++++. |..+|+|+|+|+++++.|++... +|++++++++.+.. +.+.+ ..-.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 47899999999999999999997 46899999999999999976422 37999999998873 22221 2223
Q ss_pred cccEEEEe
Q psy2376 476 KIDGILFD 483 (896)
Q Consensus 476 ~~d~il~d 483 (896)
++|.|+.|
T Consensus 115 ~fD~Vv~n 122 (260)
T 2ozv_A 115 HFHHVIMN 122 (260)
T ss_dssp CEEEEEEC
T ss_pred CcCEEEEC
Confidence 68999987
No 75
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.73 E-value=0.0042 Score=65.43 Aligned_cols=72 Identities=11% Similarity=0.223 Sum_probs=59.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~ 479 (896)
|+..++|.-+|.|..+..++++++ ++++|+|+|.++++++.|++. ...++++++++..+++ .++.|.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-------~~~~d~ 142 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-------IENASM 142 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-------CCSEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-------cccccc
Confidence 589999999999999999999875 466999999999999999764 2468999999886643 346888
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+...
T Consensus 143 v~~~~ 147 (261)
T 4gek_A 143 VVLNF 147 (261)
T ss_dssp EEEES
T ss_pred ceeee
Confidence 88765
No 76
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.69 E-value=0.0026 Score=63.69 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=56.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|..+|.|..+..++++ +..+|+|+|+++++++.+++... ++++++++..+++ .++|.|+.|
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~d~~~~~--------~~~D~v~~~ 117 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-GVNFMVADVSEIS--------GKYDTWIMN 117 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-TSEEEECCGGGCC--------CCEEEEEEC
T ss_pred CCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-CCEEEECcHHHCC--------CCeeEEEEC
Confidence 4789999999999999999987 34589999999999999987644 7999999987753 368999976
No 77
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.69 E-value=0.0024 Score=66.70 Aligned_cols=78 Identities=14% Similarity=-0.034 Sum_probs=58.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhc-HHHHHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTE-LDIILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~-~~~~l~~~~~~~~d~ 479 (896)
++..++|..+|.|..+..++++. +.++|+|+|+++++++.|++. ..+|+++++++..+ +.+.+...+-.++|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 47799999999999999999987 457999999999999999764 24679999988654 222222110125888
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+.|.
T Consensus 144 i~~np 148 (254)
T 2h00_A 144 CMCNP 148 (254)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88764
No 78
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.68 E-value=0.0026 Score=64.29 Aligned_cols=80 Identities=14% Similarity=0.111 Sum_probs=61.1
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHH
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDII 468 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~ 468 (896)
.+++.+... +++.++|.-+|.|..+..++++ .++|+|+|+++++++.+++. ..+++++++++..+..
T Consensus 46 ~~l~~l~~~---~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-- 117 (204)
T 3njr_A 46 LTLAALAPR---RGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL-- 117 (204)
T ss_dssp HHHHHHCCC---TTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG--
T ss_pred HHHHhcCCC---CCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc--
Confidence 344455554 4889999999999999999997 46999999999999999764 2348999999987631
Q ss_pred HHhcCCCcccEEEEec
Q psy2376 469 LKKYNIKKIDGILFDL 484 (896)
Q Consensus 469 l~~~~~~~~d~il~dl 484 (896)
.. .+++|.|+.|-
T Consensus 118 -~~--~~~~D~v~~~~ 130 (204)
T 3njr_A 118 -AD--LPLPEAVFIGG 130 (204)
T ss_dssp -TT--SCCCSEEEECS
T ss_pred -cc--CCCCCEEEECC
Confidence 12 23689988653
No 79
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.64 E-value=0.0039 Score=64.12 Aligned_cols=73 Identities=12% Similarity=0.025 Sum_probs=57.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|.-+|.|..+..++++.+ .++|+|+|+++++++.+++.. .+++++++++..+...++. .. ..+|.|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~-~~~D~v~ 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN-IV-EKVDVIY 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TS-CCEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc-cC-ccEEEEE
Confidence 588999999999999999999986 689999999999998886542 3679999988876333221 11 3689888
No 80
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.64 E-value=0.0049 Score=65.94 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=45.7
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
..+..++.+.+.. .+++.++|.-+|.|..+..++++++ ..+|+|+|+|+.+++.|++.
T Consensus 32 ~~~~~l~~l~~~~-~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~ 89 (292)
T 3g07_A 32 CEDGRLRVLKPEW-FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQN 89 (292)
T ss_dssp --CGGGGTSCGGG-TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHT
T ss_pred chhHHHHhhhhhh-cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHH
Confidence 4445556665431 2478999999999999999999985 46999999999999999764
No 81
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.64 E-value=0.002 Score=67.74 Aligned_cols=75 Identities=13% Similarity=0.231 Sum_probs=60.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|..+|.|..+..++++. + ++|+|+|+|+++++.|++. ..+|++++++++.++...+ .-.++|.|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~---~~~~fD~I 123 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI---PKERADIV 123 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS---CTTCEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh---ccCCccEE
Confidence 47899999999999999999985 3 3999999999999999764 3568999999998875422 22369999
Q ss_pred EEecc
Q psy2376 481 LFDLG 485 (896)
Q Consensus 481 l~dlG 485 (896)
+.|--
T Consensus 124 i~npP 128 (259)
T 3lpm_A 124 TCNPP 128 (259)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98743
No 82
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.63 E-value=0.0031 Score=65.20 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=57.9
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~ 468 (896)
...++.+.++ ++..++|.-+|.|..+..++++. .+++|+|.++++++.+++.. .+++++++++..+++
T Consensus 11 ~~~~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 82 (239)
T 1xxl_A 11 GLMIKTAECR---AEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-- 82 (239)
T ss_dssp HHHHHHHTCC---TTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--
T ss_pred chHHHHhCcC---CCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC--
Confidence 4556666664 48999999999999999999875 38999999999999987642 146777777765542
Q ss_pred HHhcCCCcccEEEE
Q psy2376 469 LKKYNIKKIDGILF 482 (896)
Q Consensus 469 l~~~~~~~~d~il~ 482 (896)
..-.++|.|+.
T Consensus 83 ---~~~~~fD~v~~ 93 (239)
T 1xxl_A 83 ---FPDDSFDIITC 93 (239)
T ss_dssp ---SCTTCEEEEEE
T ss_pred ---CCCCcEEEEEE
Confidence 11124666665
No 83
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.62 E-value=0.0051 Score=63.28 Aligned_cols=77 Identities=12% Similarity=0.071 Sum_probs=58.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc--cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..++++.++.++|+|+|.++.+++.+.+. ..+++++++++..+...+ ... ..++|.|+.|
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~-~~~-~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKY-RML-IAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGG-GGG-CCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhh-ccc-CCcEEEEEEc
Confidence 588999999999999999999987778999999998866544332 126899999988764321 111 1368999986
Q ss_pred c
Q psy2376 484 L 484 (896)
Q Consensus 484 l 484 (896)
.
T Consensus 155 ~ 155 (233)
T 2ipx_A 155 V 155 (233)
T ss_dssp C
T ss_pred C
Confidence 4
No 84
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.62 E-value=0.0047 Score=59.72 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=57.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|..+|.|..+..++++. + +|+|+|.++++++.+++.. +-+++++++++.+....+... .+++|.|+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQ-GERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHT-TCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhcc-CCceEEEEE
Confidence 37899999999999999999974 3 4999999999999997642 227999999987754333321 125899998
Q ss_pred e
Q psy2376 483 D 483 (896)
Q Consensus 483 d 483 (896)
|
T Consensus 117 ~ 117 (171)
T 1ws6_A 117 A 117 (171)
T ss_dssp C
T ss_pred C
Confidence 7
No 85
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.61 E-value=0.0047 Score=62.71 Aligned_cols=75 Identities=9% Similarity=-0.001 Sum_probs=54.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc--cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..+++..+ +++|+|+|+++.+++...+. ..+++.+++++..+...+.. .. .++|.|+.|
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~-~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSG-IV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTT-TC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcc-cc-cceeEEEEe
Confidence 588999999999999999999986 78999999999876433221 12568888877655432211 11 368999877
No 86
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.61 E-value=0.0052 Score=63.35 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=61.0
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHh-cCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKK-YNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~-~~~~~~d~i 480 (896)
++.++|...|.|..+..+++.++++++|+++|+++++++.|++. ..+++++++++..+...-+.. ....++|.|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 67899999999999999999997788999999999999999764 246899999987654333322 111368999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 153 ~~d 155 (232)
T 3cbg_A 153 FID 155 (232)
T ss_dssp EEC
T ss_pred EEC
Confidence 887
No 87
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.58 E-value=0.0053 Score=62.80 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=61.0
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcC-CCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYN-IKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~-~~~~d~i 480 (896)
++.++|...|.|..+..+++.+++.++|+++|+++++++.+++. ..+++++++++..+...-+...+ ..++|.|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 67999999999999999999987688999999999999999764 24689999998765433333211 1368999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 150 ~~d 152 (229)
T 2avd_A 150 VVD 152 (229)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 88
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.58 E-value=0.0024 Score=64.58 Aligned_cols=72 Identities=17% Similarity=0.188 Sum_probs=59.1
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++.++|...|.|..|..+++.++++++|+++|+++++++.+++. ..+++++++++..+. ++... . +|.|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~-~-fD~v~ 131 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI---AAGQR-D-IDILF 131 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH---HTTCC-S-EEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH---hccCC-C-CCEEE
Confidence 67899999999999999999987688999999999999998764 246899999887543 33322 3 89999
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.|
T Consensus 132 ~~ 133 (210)
T 3c3p_A 132 MD 133 (210)
T ss_dssp EE
T ss_pred Ec
Confidence 88
No 89
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.56 E-value=0.0063 Score=64.83 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=59.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|.-+|.|+.|..++.+. ++++|+|+|+|+++++.|+++. -+|+++++++..+++ + .++|.|+
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----d---~~FDvV~ 193 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----G---LEFDVLM 193 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----G---CCCSEEE
T ss_pred CcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----C---CCcCEEE
Confidence 58999999999999998888776 4789999999999999998641 278999999988753 2 2689998
Q ss_pred Eecc
Q psy2376 482 FDLG 485 (896)
Q Consensus 482 ~dlG 485 (896)
.+.+
T Consensus 194 ~~a~ 197 (298)
T 3fpf_A 194 VAAL 197 (298)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 7654
No 90
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.56 E-value=0.005 Score=60.10 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=61.0
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C-CCeEEEccChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D-SRFSIIHNCFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~-~~~~~~~~~~~~~~~~ 468 (896)
+.+++.+... +++.++|..+|.|..+..+++ +..+++|+|.++++++.+++.. + +++++++++..+ .
T Consensus 25 ~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~ 95 (183)
T 2yxd_A 25 AVSIGKLNLN---KDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---V 95 (183)
T ss_dssp HHHHHHHCCC---TTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---H
T ss_pred HHHHHHcCCC---CCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---c
Confidence 3444545443 478999999999999999998 4679999999999999997642 1 579999988765 2
Q ss_pred HHhcCCCcccEEEEec
Q psy2376 469 LKKYNIKKIDGILFDL 484 (896)
Q Consensus 469 l~~~~~~~~d~il~dl 484 (896)
+++ .++|.|+.+.
T Consensus 96 ~~~---~~~D~i~~~~ 108 (183)
T 2yxd_A 96 LDK---LEFNKAFIGG 108 (183)
T ss_dssp GGG---CCCSEEEECS
T ss_pred ccC---CCCcEEEECC
Confidence 333 3689988863
No 91
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.55 E-value=0.0059 Score=62.40 Aligned_cols=75 Identities=9% Similarity=0.149 Sum_probs=59.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc----cCCCeEEEccChhcH-HHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI----TDSRFSIIHNCFTEL-DIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~----~~~~~~~~~~~~~~~-~~~l~~~~~~~~d~i 480 (896)
++.+++|.-+|.|.++..++++. |+.+|+|+|+++++++.+++. --+++++++++..++ ++.+.+ ..+|.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~---~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPD---NSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCT---TCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCC---CChheE
Confidence 47899999999999999999987 578999999999999988754 125699999998774 333332 368999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.++
T Consensus 110 ~~~~ 113 (218)
T 3dxy_A 110 QLFF 113 (218)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8763
No 92
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.53 E-value=0.0061 Score=61.75 Aligned_cols=84 Identities=15% Similarity=0.176 Sum_probs=66.5
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDI 467 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~ 467 (896)
.+++++.+... ++..++|.-+|.|..+..++++.++.++++|+|.++++++.+++.. -+++++++++..+++
T Consensus 26 ~~~~~~~~~~~---~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~- 101 (219)
T 3dh0_A 26 PEKVLKEFGLK---EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP- 101 (219)
T ss_dssp HHHHHHHHTCC---TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-
T ss_pred HHHHHHHhCCC---CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-
Confidence 35566666554 4889999999999999999999877889999999999999997642 247999999887653
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
..-.++|.|+.+
T Consensus 102 ----~~~~~fD~v~~~ 113 (219)
T 3dh0_A 102 ----LPDNTVDFIFMA 113 (219)
T ss_dssp ----SCSSCEEEEEEE
T ss_pred ----CCCCCeeEEEee
Confidence 122368999876
No 93
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.47 E-value=0.0054 Score=65.41 Aligned_cols=72 Identities=21% Similarity=0.222 Sum_probs=56.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|..+|.|..+..+++. +..+|+|+|++++|++.|++. ..+|+++++++..+.. .. ...++|.|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---~~-~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---KE-KFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---GG-GTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---cc-ccCCCCEE
Confidence 3678999999999999999998 578999999999999999764 3457999999876521 11 11123988
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 197 vsn 199 (284)
T 1nv8_A 197 LSN 199 (284)
T ss_dssp EEC
T ss_pred EEc
Confidence 877
No 94
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.0065 Score=65.09 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=68.5
Q ss_pred cchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c---CCCeEEEccChh
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T---DSRFSIIHNCFT 463 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~---~~~~~~~~~~~~ 463 (896)
....++.+.+.....+++..++|.-+|.|..+..+++++++..+|+|+|+++.+++.+++. . .+++++++.+..
T Consensus 20 ~y~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 20 SYPSDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp CCCHHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred CCCHHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 3344444444332113589999999999999999999875678999999999999999764 1 568999999998
Q ss_pred cHHHHHHh---cCCCcccEEEEec
Q psy2376 464 ELDIILKK---YNIKKIDGILFDL 484 (896)
Q Consensus 464 ~~~~~l~~---~~~~~~d~il~dl 484 (896)
+++ ..+ ....++|.|+...
T Consensus 100 ~~~--~~~~~~~~~~~fD~V~~~~ 121 (299)
T 3g5t_A 100 DFK--FLGADSVDKQKIDMITAVE 121 (299)
T ss_dssp CCG--GGCTTTTTSSCEEEEEEES
T ss_pred hCC--ccccccccCCCeeEEeHhh
Confidence 765 111 0113699998864
No 95
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.45 E-value=0.0054 Score=63.46 Aligned_cols=74 Identities=9% Similarity=0.125 Sum_probs=59.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc----------cCCCeEEEccChhc-HHHHHHhcCC
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI----------TDSRFSIIHNCFTE-LDIILKKYNI 474 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~----------~~~~~~~~~~~~~~-~~~~l~~~~~ 474 (896)
++..++|.-+|.|.++..++++. |+..++|+|+++.+++.|++. ..+++++++++..+ ++.++.+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~--- 121 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK--- 121 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT---
T ss_pred CCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC---
Confidence 46799999999999999999987 578999999999999887642 12579999999876 6665543
Q ss_pred CcccEEEEe
Q psy2376 475 KKIDGILFD 483 (896)
Q Consensus 475 ~~~d~il~d 483 (896)
..+|.|.++
T Consensus 122 ~~~D~v~~~ 130 (235)
T 3ckk_A 122 GQLTKMFFL 130 (235)
T ss_dssp TCEEEEEEE
T ss_pred cCeeEEEEe
Confidence 268888764
No 96
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.44 E-value=0.0055 Score=61.61 Aligned_cols=69 Identities=19% Similarity=0.284 Sum_probs=56.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|..+|.|+.+..++++ + ..+|+|+|+++++++.+++.. +-++++++++..+++ .++|.|+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN--------SRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC--------CCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC--------CCCCEEEE
Confidence 4789999999999999999887 3 348999999999999997642 227999999987753 25899997
Q ss_pred ec
Q psy2376 483 DL 484 (896)
Q Consensus 483 dl 484 (896)
|.
T Consensus 119 ~~ 120 (207)
T 1wy7_A 119 NP 120 (207)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 97
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.44 E-value=0.0084 Score=64.30 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=65.8
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~ 465 (896)
+++.+++.+..+ ++..++|.-+|.|+.+..++++.+ ++|+|+|.++++++.+++. ..+++++++.++.++
T Consensus 60 ~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 60 KRKLALDKLNLE---PGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF 134 (302)
T ss_dssp HHHHHHHTTCCC---TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC
T ss_pred HHHHHHHHcCCC---CcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc
Confidence 345566666654 488999999999999999999985 6899999999999999764 245899999998775
Q ss_pred HHHHHhcCCCcccEEEEec
Q psy2376 466 DIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~dl 484 (896)
-+++|.|+...
T Consensus 135 --------~~~fD~v~~~~ 145 (302)
T 3hem_A 135 --------DEPVDRIVSLG 145 (302)
T ss_dssp --------CCCCSEEEEES
T ss_pred --------CCCccEEEEcc
Confidence 13689999773
No 98
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.38 E-value=0.0024 Score=64.27 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=55.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C---CCeEEEccChhcHHHHHHhcCCCc-ccE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D---SRFSIIHNCFTELDIILKKYNIKK-IDG 479 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~---~~~~~~~~~~~~~~~~l~~~~~~~-~d~ 479 (896)
++.++|..+|.|..+..++++. ..+|+|+|+|+++++.+++.. + +++++++++..+.. ....-.+ +|.
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~~fD~ 128 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL---KQPQNQPHFDV 128 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT---TSCCSSCCEEE
T ss_pred CCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH---HhhccCCCCCE
Confidence 7899999999999999988873 358999999999999997641 2 58999999875542 2211236 899
Q ss_pred EEEe
Q psy2376 480 ILFD 483 (896)
Q Consensus 480 il~d 483 (896)
|+.|
T Consensus 129 I~~~ 132 (201)
T 2ift_A 129 VFLD 132 (201)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9875
No 99
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.31 E-value=0.016 Score=60.48 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=52.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..+++. ++ +|+|+|+|+.+++.+++.. .-.+++++++..+. +.. .++|.|+.
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~---~~~---~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA---LPF---GPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH---GGG---CCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc---CcC---CCCCEEEE
Confidence 4789999999999999998775 33 9999999999999997642 11278888776542 322 26899988
Q ss_pred ec
Q psy2376 483 DL 484 (896)
Q Consensus 483 dl 484 (896)
|.
T Consensus 191 n~ 192 (254)
T 2nxc_A 191 NL 192 (254)
T ss_dssp EC
T ss_pred CC
Confidence 63
No 100
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.30 E-value=0.0083 Score=63.57 Aligned_cols=76 Identities=21% Similarity=0.204 Sum_probs=60.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+|++++|+-.|.|+-|..++++- .++|+|+|++|.|++.+++. .++++++++++..++. .-..+|-|
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~------~~~~~D~V 196 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------GENIADRI 196 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------CCSCEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc------cccCCCEE
Confidence 59999999999999999999873 46999999999999998753 4688999998765542 12368999
Q ss_pred EEecccCcc
Q psy2376 481 LFDLGISSN 489 (896)
Q Consensus 481 l~dlG~ss~ 489 (896)
++|+=.+|.
T Consensus 197 i~~~p~~~~ 205 (278)
T 3k6r_A 197 LMGYVVRTH 205 (278)
T ss_dssp EECCCSSGG
T ss_pred EECCCCcHH
Confidence 988755553
No 101
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.27 E-value=0.012 Score=65.38 Aligned_cols=86 Identities=9% Similarity=0.219 Sum_probs=64.9
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc------------c-CCCeEE
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI------------T-DSRFSI 457 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~------------~-~~~~~~ 457 (896)
+..++++.+..+ +++.++|.-+|.|..+..++...+ ..+++|+|+++++++.|++. . .+++++
T Consensus 161 ~i~~il~~l~l~---~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 161 LVAQMIDEIKMT---DDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp HHHHHHHHHCCC---TTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred HHHHHHHhcCCC---CCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 345666666664 489999999999999999998874 45899999999999888642 1 268999
Q ss_pred EccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 458 IHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 458 ~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++++.+++-- .. ...+|.|+.|
T Consensus 237 i~GD~~~lp~~-d~--~~~aDVVf~N 259 (438)
T 3uwp_A 237 ERGDFLSEEWR-ER--IANTSVIFVN 259 (438)
T ss_dssp EECCTTSHHHH-HH--HHTCSEEEEC
T ss_pred EECcccCCccc-cc--cCCccEEEEc
Confidence 99999887531 11 1247777764
No 102
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.24 E-value=0.0063 Score=62.79 Aligned_cols=72 Identities=24% Similarity=0.269 Sum_probs=58.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|..+|.|+.+..++++. .+|+|+|+++.+++.+++.. .+++++++++..++. .+ .++|.|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~---~~~D~v 148 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---SF---LKADVV 148 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---GG---CCCSEE
T ss_pred CCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---cc---CCCCEE
Confidence 47899999999999999999862 69999999999999997642 258999999987764 22 269999
Q ss_pred EEeccc
Q psy2376 481 LFDLGI 486 (896)
Q Consensus 481 l~dlG~ 486 (896)
+.|.-.
T Consensus 149 ~~~~~~ 154 (241)
T 3gdh_A 149 FLSPPW 154 (241)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 988433
No 103
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.21 E-value=0.0072 Score=62.80 Aligned_cols=75 Identities=8% Similarity=0.161 Sum_probs=57.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----------C-CCeEEEccChhc-HHHHHHhc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----------D-SRFSIIHNCFTE-LDIILKKY 472 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----------~-~~~~~~~~~~~~-~~~~l~~~ 472 (896)
++..++|+-+|.|+.+..+++.. ++++|+|+|+++.+++.+++.. + +++++++++..+ +++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~-- 125 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE-- 125 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc--
Confidence 47899999999999999999997 5679999999999998886531 1 578898888665 443322
Q ss_pred CCCcccEEEEec
Q psy2376 473 NIKKIDGILFDL 484 (896)
Q Consensus 473 ~~~~~d~il~dl 484 (896)
...+|.|++++
T Consensus 126 -~~~~d~v~~~~ 136 (246)
T 2vdv_E 126 -KGQLSKMFFCF 136 (246)
T ss_dssp -TTCEEEEEEES
T ss_pred -ccccCEEEEEC
Confidence 23578887553
No 104
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.21 E-value=0.006 Score=68.13 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=55.7
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c--C-CCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T--D-SRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~--~-~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
|+.++|+++|.|..+.++.+. ..+|+|+|+|+++++.+++. . + +++++++++..+..+.+.. .++|.|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~---~~fDvV 167 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKT---FHPDYI 167 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHH---HCCSEE
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccC---CCceEE
Confidence 789999999999999988876 35999999999999999764 2 2 5799999997764222221 158999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
++|
T Consensus 168 ~lD 170 (410)
T 3ll7_A 168 YVD 170 (410)
T ss_dssp EEC
T ss_pred EEC
Confidence 965
No 105
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.15 E-value=0.011 Score=59.51 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=63.0
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDI 467 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~ 467 (896)
+++++.+..+ ++ .++|.-+|.|..+..++++ +..+++|+|.++++++.+++. ..+++++++.++.+++
T Consensus 34 ~~~~~~~~~~---~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 106 (219)
T 3dlc_A 34 ENIINRFGIT---AG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP- 106 (219)
T ss_dssp HHHHHHHCCC---EE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-
T ss_pred HHHHHhcCCC---CC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-
Confidence 4445555543 24 9999999999999999998 467999999999999999764 2468999999987754
Q ss_pred HHHhcCCCcccEEEEec
Q psy2376 468 ILKKYNIKKIDGILFDL 484 (896)
Q Consensus 468 ~l~~~~~~~~d~il~dl 484 (896)
..-.++|.|+.+.
T Consensus 107 ----~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 107 ----IEDNYADLIVSRG 119 (219)
T ss_dssp ----SCTTCEEEEEEES
T ss_pred ----CCcccccEEEECc
Confidence 1123689999874
No 106
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.15 E-value=0.0045 Score=68.24 Aligned_cols=74 Identities=19% Similarity=0.201 Sum_probs=59.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C-CCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D-SRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|..+|.|..+..+++..+++.+++|+|+|+++++.|++.. + +++++++.++.++... ...+|.|+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~-----~~~~D~Ii 277 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF-----FPEVDRIL 277 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT-----CCCCSEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc-----cCCCCEEE
Confidence 4789999999999999999998866789999999999999997641 1 2799999998876421 12468888
Q ss_pred Eec
Q psy2376 482 FDL 484 (896)
Q Consensus 482 ~dl 484 (896)
.|.
T Consensus 278 ~np 280 (354)
T 3tma_A 278 ANP 280 (354)
T ss_dssp ECC
T ss_pred ECC
Confidence 774
No 107
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.15 E-value=0.015 Score=59.38 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=61.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC----CCcEEEEEeCCHHHHHHhhccc---------CCCeEEEccChhcHH-HHHHh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG----KKGRLIAIDKDTESVSLGNKIT---------DSRFSIIHNCFTELD-IILKK 471 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~----~~~~~~~~D~d~~a~~~~~~~~---------~~~~~~~~~~~~~~~-~~l~~ 471 (896)
++..++|.-.|.|..+..+++..+ ++++|+|+|+++++++.+++.. .+++++++.+..+.. +....
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 478999999999999999999986 6789999999999999997641 358999998876532 11111
Q ss_pred cCCCcccEEEEeccc
Q psy2376 472 YNIKKIDGILFDLGI 486 (896)
Q Consensus 472 ~~~~~~d~il~dlG~ 486 (896)
. .++|.|+.+-..
T Consensus 160 ~--~~fD~I~~~~~~ 172 (227)
T 2pbf_A 160 L--GLFDAIHVGASA 172 (227)
T ss_dssp H--CCEEEEEECSBB
T ss_pred C--CCcCEEEECCch
Confidence 1 268999887654
No 108
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.14 E-value=0.005 Score=63.74 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=59.1
Q ss_pred CcEEEEEccCCChhHHHHHHH---cCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILER---LGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~---~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.++|.-+|.|+.|..+++. .+++++|+|+|+++++++.|+.+ .+++++++++..+... ++...-.++|.|+.|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~-~~~v~~~~gD~~~~~~-l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD-MENITLHQGDCSDLTT-FEHLREMAHPLIFID 159 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG-CTTEEEEECCSSCSGG-GGGGSSSCSSEEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc-CCceEEEECcchhHHH-HHhhccCCCCEEEEC
Confidence 579999999999999999998 46789999999999999888753 5789999998776421 111111258888876
Q ss_pred cc
Q psy2376 484 LG 485 (896)
Q Consensus 484 lG 485 (896)
.+
T Consensus 160 ~~ 161 (236)
T 2bm8_A 160 NA 161 (236)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 109
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.11 E-value=0.009 Score=60.12 Aligned_cols=81 Identities=11% Similarity=0.006 Sum_probs=58.9
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----------------CCCe
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----------------DSRF 455 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----------------~~~~ 455 (896)
+.+.++.+... +++.++|.-+|.|.++..++++ + .+|+|+|.++++++.|++.. ..++
T Consensus 11 l~~~~~~l~~~---~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v 84 (203)
T 1pjz_A 11 LQQYWSSLNVV---PGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI 84 (203)
T ss_dssp HHHHHHHHCCC---TTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred HHHHHHhcccC---CCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence 34444444433 4789999999999999999987 3 48999999999999997642 2578
Q ss_pred EEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 456 SIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 456 ~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++++++.+++..-. .++|.|+.
T Consensus 85 ~~~~~d~~~l~~~~~----~~fD~v~~ 107 (203)
T 1pjz_A 85 EIWCGDFFALTARDI----GHCAAFYD 107 (203)
T ss_dssp EEEEECCSSSTHHHH----HSEEEEEE
T ss_pred EEEECccccCCcccC----CCEEEEEE
Confidence 888888877652110 14777763
No 110
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.10 E-value=0.0055 Score=65.10 Aligned_cols=72 Identities=11% Similarity=0.133 Sum_probs=58.6
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~ 465 (896)
..+.+++.+... +++.++|.-+|.|..|..++++.++ +++|+|+|+|+++++.+++...++++++++++.++
T Consensus 30 i~~~iv~~~~~~---~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 30 VIDAIVAAIRPE---RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHCCC---TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred HHHHHHHhcCCC---CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 346666766664 4889999999999999999999754 46799999999999999765346799999988654
No 111
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.09 E-value=0.0083 Score=62.84 Aligned_cols=70 Identities=16% Similarity=0.234 Sum_probs=57.8
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELD 466 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~ 466 (896)
..+.+++.+... +++.++|.-.|.|..|..++++. ++|+|+|+|+++++.+++.. .++++++++++.+++
T Consensus 17 i~~~iv~~~~~~---~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 17 VLQKIVSAIHPQ---KTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFD 88 (255)
T ss_dssp HHHHHHHHHCCC---TTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCC
T ss_pred HHHHHHHhcCCC---CcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCC
Confidence 456677777664 48899999999999999999974 58999999999999998754 368999999886653
No 112
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.09 E-value=0.014 Score=62.32 Aligned_cols=82 Identities=18% Similarity=0.285 Sum_probs=63.8
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~ 465 (896)
..+.+++.+... +++.++|.-+|.|..|..++++. .+|+|+|+|+.+++.+++.. .++++++++++.++
T Consensus 16 i~~~i~~~~~~~---~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 16 IINSIIDKAALR---PTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHTCCC---TTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHhcCCC---CCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 446666666654 48899999999999999999984 48999999999999987642 25799999988654
Q ss_pred HHHHHhcCCCcccEEEEecc
Q psy2376 466 DIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~dlG 485 (896)
+ .+.+|.|+.|+-
T Consensus 90 ~-------~~~fD~vv~nlp 102 (285)
T 1zq9_A 90 D-------LPFFDTCVANLP 102 (285)
T ss_dssp C-------CCCCSEEEEECC
T ss_pred c-------chhhcEEEEecC
Confidence 2 225787877764
No 113
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.03 E-value=0.012 Score=59.40 Aligned_cols=85 Identities=15% Similarity=0.120 Sum_probs=64.2
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHH
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l 469 (896)
.+++.+... ++..++|.-+|.|..+..+++..+++++|+|+|.++++++.+++.. .+++++++.+...- +
T Consensus 68 ~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~ 141 (215)
T 2yxe_A 68 MMCELLDLK---PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG---Y 141 (215)
T ss_dssp HHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC---C
T ss_pred HHHHhhCCC---CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC---C
Confidence 445555443 4889999999999999999999877789999999999999997642 24688888876321 1
Q ss_pred HhcCCCcccEEEEeccc
Q psy2376 470 KKYNIKKIDGILFDLGI 486 (896)
Q Consensus 470 ~~~~~~~~d~il~dlG~ 486 (896)
.. ..++|.|+.+.+.
T Consensus 142 ~~--~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 142 EP--LAPYDRIYTTAAG 156 (215)
T ss_dssp GG--GCCEEEEEESSBB
T ss_pred CC--CCCeeEEEECCch
Confidence 11 1268999988655
No 114
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=95.99 E-value=0.0055 Score=61.70 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=55.2
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C-CCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D-SRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
++.++|..+|.|..+..++++. ..+|+|+|+++++++.+++.. + +++++++++..+. +.. .-.++|.|+.
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~---~~~-~~~~fD~V~~ 128 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF---LAQ-KGTPHNIVFV 128 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH---HSS-CCCCEEEEEE
T ss_pred CCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH---Hhh-cCCCCCEEEE
Confidence 7899999999999999988874 248999999999999997642 1 5899999887553 222 1236899987
Q ss_pred e
Q psy2376 483 D 483 (896)
Q Consensus 483 d 483 (896)
|
T Consensus 129 ~ 129 (202)
T 2fpo_A 129 D 129 (202)
T ss_dssp C
T ss_pred C
Confidence 4
No 115
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.98 E-value=0.011 Score=63.24 Aligned_cols=85 Identities=19% Similarity=0.327 Sum_probs=66.7
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHHHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDII 468 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~~~ 468 (896)
..+.+++.+... +++.++|.-.|.|..|..++++ ..+|+|+|+|+++++.+++.. .++++++++++.+++
T Consensus 38 i~~~Iv~~l~~~---~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~-- 109 (295)
T 3gru_A 38 FVNKAVESANLT---KDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD-- 109 (295)
T ss_dssp HHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC--
T ss_pred HHHHHHHhcCCC---CcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC--
Confidence 456677777664 4889999999999999999998 258999999999999997753 468999999987653
Q ss_pred HHhcCCCcccEEEEeccc
Q psy2376 469 LKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 469 l~~~~~~~~d~il~dlG~ 486 (896)
+.+ .++|.|+.|+-.
T Consensus 110 ~~~---~~fD~Iv~NlPy 124 (295)
T 3gru_A 110 LNK---LDFNKVVANLPY 124 (295)
T ss_dssp GGG---SCCSEEEEECCG
T ss_pred ccc---CCccEEEEeCcc
Confidence 122 147888888653
No 116
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.88 E-value=0.023 Score=59.01 Aligned_cols=83 Identities=18% Similarity=0.259 Sum_probs=63.9
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDI 467 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~ 467 (896)
..+++.+... +++..++|.-+|.|..+..++++.+ ++|+|+|.++.+++.+++. ..+|+++++++..+++
T Consensus 35 ~~~l~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 109 (257)
T 3f4k_A 35 RKAVSFINEL--TDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP- 109 (257)
T ss_dssp HHHHTTSCCC--CTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-
T ss_pred HHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-
Confidence 4455555322 2578999999999999999999974 4999999999999998764 3467999999987764
Q ss_pred HHHhcCCCcccEEEEec
Q psy2376 468 ILKKYNIKKIDGILFDL 484 (896)
Q Consensus 468 ~l~~~~~~~~d~il~dl 484 (896)
..-.++|.|+.+.
T Consensus 110 ----~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 110 ----FQNEELDLIWSEG 122 (257)
T ss_dssp ----SCTTCEEEEEEES
T ss_pred ----CCCCCEEEEEecC
Confidence 1123689998873
No 117
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.88 E-value=0.017 Score=60.60 Aligned_cols=85 Identities=15% Similarity=0.237 Sum_probs=64.8
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELD 466 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~ 466 (896)
.+++++.+.. .+++..++|.-+|.|..+..++++ +.++|+|+|.++.+++.+++. ..+++++++++..+++
T Consensus 34 ~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 34 TLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp HHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 3445555552 135899999999999999999998 467999999999999998764 2477999999987754
Q ss_pred HHHHhcCCCcccEEEEecc
Q psy2376 467 IILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~dlG 485 (896)
..-.++|.|+.+.-
T Consensus 110 -----~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 110 -----FRNEELDLIWSEGA 123 (267)
T ss_dssp -----CCTTCEEEEEESSC
T ss_pred -----CCCCCEEEEEEcCC
Confidence 11236899886643
No 118
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.87 E-value=0.012 Score=62.38 Aligned_cols=71 Identities=13% Similarity=0.062 Sum_probs=57.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+++.++|+.+|.|..|..++++.+ .++|+|+|++++|++.+++.. -+++++++++..+. .. -.++|.|+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-----~~~~D~Vi 191 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-----KDVADRVI 191 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-----TTCEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-----cCCceEEE
Confidence 478999999999999999999974 679999999999999997641 14688999887765 21 22689998
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.|
T Consensus 192 ~d 193 (272)
T 3a27_A 192 MG 193 (272)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 119
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.86 E-value=0.0068 Score=65.12 Aligned_cols=82 Identities=20% Similarity=0.229 Sum_probs=59.9
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELD 466 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~ 466 (896)
+.+.+++.+... +++.++|.-+|.|..|..++++ .++|+|+|+|+.+++.+++.. .++++++++++.+++
T Consensus 30 i~~~i~~~~~~~---~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 30 ILDKIIYAAKIK---SSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHCCC---TTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred HHHHHHHhcCCC---CcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 345666666554 4889999999999999999987 358999999999999987642 257899888876542
Q ss_pred HHHHhcCCCcccEEEEecc
Q psy2376 467 IILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~dlG 485 (896)
.+++|.|+.|+-
T Consensus 104 -------~~~~D~Vv~n~p 115 (299)
T 2h1r_A 104 -------FPKFDVCTANIP 115 (299)
T ss_dssp -------CCCCSEEEEECC
T ss_pred -------cccCCEEEEcCC
Confidence 235788888864
No 120
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.85 E-value=0.028 Score=56.48 Aligned_cols=83 Identities=8% Similarity=-0.020 Sum_probs=62.5
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~ 468 (896)
..+++.+..+ +++.++|..+|.|..+..+++. .++|+|+|+++++++.+++.. -+++++++++..+...
T Consensus 67 ~~~~~~l~~~---~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 139 (210)
T 3lbf_A 67 ARMTELLELT---PQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ- 139 (210)
T ss_dssp HHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-
T ss_pred HHHHHhcCCC---CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-
Confidence 3344555544 4889999999999999999998 369999999999999997642 2479999988765321
Q ss_pred HHhcCCCcccEEEEeccc
Q psy2376 469 LKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 469 l~~~~~~~~d~il~dlG~ 486 (896)
. -.++|.|+.+.+.
T Consensus 140 --~--~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 140 --A--RAPFDAIIVTAAP 153 (210)
T ss_dssp --G--GCCEEEEEESSBC
T ss_pred --c--CCCccEEEEccch
Confidence 1 1369999998544
No 121
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.83 E-value=0.021 Score=60.57 Aligned_cols=81 Identities=11% Similarity=0.172 Sum_probs=63.8
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~ 465 (896)
+.+.+++.+..+ ++..++|.-+|.|+.+..++++.+ .+|+|+|.++++++.+++.. .+++++++.++.++
T Consensus 52 ~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 52 KIDLALGKLGLQ---PGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHTTTTCC---TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred HHHHHHHHcCCC---CcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 344556666554 488999999999999999998874 49999999999999997642 35899999988765
Q ss_pred HHHHHhcCCCcccEEEEec
Q psy2376 466 DIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~dl 484 (896)
+ +++|.|+...
T Consensus 127 ~--------~~fD~v~~~~ 137 (287)
T 1kpg_A 127 D--------EPVDRIVSIG 137 (287)
T ss_dssp C--------CCCSEEEEES
T ss_pred C--------CCeeEEEEeC
Confidence 3 3689888653
No 122
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.81 E-value=0.021 Score=61.51 Aligned_cols=81 Identities=14% Similarity=0.216 Sum_probs=63.5
Q ss_pred HHHhhhcc-ccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHH
Q psy2376 393 NEAINWLN-IENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELD 466 (896)
Q Consensus 393 ~e~l~~L~-~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~ 466 (896)
+.+++.+. .+ +++.++|.-+|.|..+..++++. .++|+|+|+++++++.+++. ..+++++++++..+++
T Consensus 106 ~~l~~~l~~~~---~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 106 EFLMDHLGQAG---PDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHTTSCCCC---TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHhccCC---CCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 45666665 33 58899999999999999999987 36899999999999999764 2468999999987653
Q ss_pred HHHHhcCCCcccEEEEe
Q psy2376 467 IILKKYNIKKIDGILFD 483 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~d 483 (896)
..-.++|.|+..
T Consensus 181 -----~~~~~fD~V~~~ 192 (312)
T 3vc1_A 181 -----FDKGAVTASWNN 192 (312)
T ss_dssp -----CCTTCEEEEEEE
T ss_pred -----CCCCCEeEEEEC
Confidence 112368988853
No 123
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.80 E-value=0.026 Score=58.69 Aligned_cols=83 Identities=17% Similarity=0.171 Sum_probs=65.1
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC--CCeEEEccChhcHHHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--SRFSIIHNCFTELDIIL 469 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~--~~~~~~~~~~~~~~~~l 469 (896)
.+++++.+..+ ++..++|.-+|.|..+..++++. ..+|+|+|.++++++.+++... +++++++.+..+++
T Consensus 44 ~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 115 (266)
T 3ujc_A 44 TKKILSDIELN---ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--- 115 (266)
T ss_dssp HHHHTTTCCCC---TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC---
T ss_pred HHHHHHhcCCC---CCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC---
Confidence 45666666554 48899999999999999999987 4699999999999999987532 68999998887652
Q ss_pred HhcCCCcccEEEEec
Q psy2376 470 KKYNIKKIDGILFDL 484 (896)
Q Consensus 470 ~~~~~~~~d~il~dl 484 (896)
..-.++|.|+...
T Consensus 116 --~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 116 --FPENNFDLIYSRD 128 (266)
T ss_dssp --CCTTCEEEEEEES
T ss_pred --CCCCcEEEEeHHH
Confidence 1123688888753
No 124
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.79 E-value=0.04 Score=55.37 Aligned_cols=82 Identities=15% Similarity=0.190 Sum_probs=63.4
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILK 470 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~ 470 (896)
..+.+++.+... ++++.++|.-+|.|..+..++++ ..+++|+|.++++++.+++...++++++++++.++ .
T Consensus 33 ~~~~~~~~l~~~--~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---~- 103 (218)
T 3ou2_A 33 AAPAALERLRAG--NIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---T- 103 (218)
T ss_dssp THHHHHHHHTTT--TSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---C-
T ss_pred HHHHHHHHHhcC--CCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---C-
Confidence 345555655532 24789999999999999999998 35999999999999999874336899999998765 1
Q ss_pred hcCCCcccEEEEe
Q psy2376 471 KYNIKKIDGILFD 483 (896)
Q Consensus 471 ~~~~~~~d~il~d 483 (896)
.-.++|.|+.+
T Consensus 104 --~~~~~D~v~~~ 114 (218)
T 3ou2_A 104 --PDRQWDAVFFA 114 (218)
T ss_dssp --CSSCEEEEEEE
T ss_pred --CCCceeEEEEe
Confidence 12368999875
No 125
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.77 E-value=0.022 Score=61.48 Aligned_cols=81 Identities=12% Similarity=0.204 Sum_probs=64.5
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~ 465 (896)
+.+++++.+..+ ++..++|.-+|.|..+..++++.+ .+|+|+|+++++++.+++. ..+++++++.+..++
T Consensus 78 ~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 78 KVDLNLDKLDLK---PGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHTTSCCC---TTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC
T ss_pred HHHHHHHhcCCC---CcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC
Confidence 345566666554 488999999999999999999873 5999999999999999764 236799999998766
Q ss_pred HHHHHhcCCCcccEEEEec
Q psy2376 466 DIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~dl 484 (896)
+ .++|.|+...
T Consensus 153 ~--------~~fD~v~~~~ 163 (318)
T 2fk8_A 153 A--------EPVDRIVSIE 163 (318)
T ss_dssp C--------CCCSEEEEES
T ss_pred C--------CCcCEEEEeC
Confidence 3 3689998763
No 126
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.74 E-value=0.016 Score=59.20 Aligned_cols=89 Identities=12% Similarity=0.099 Sum_probs=64.6
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCC-----CcEEEEEeCCHHHHHHhhccc---------CCCeEE
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGK-----KGRLIAIDKDTESVSLGNKIT---------DSRFSI 457 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~-----~~~~~~~D~d~~a~~~~~~~~---------~~~~~~ 457 (896)
...+++.+.... +++..++|.-.|.|..+..+++..+. +++|+|+|+++++++.+++.. .+++++
T Consensus 71 ~~~~~~~l~~~~-~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 71 HAFALEYLRDHL-KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHTTTTC-CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHhhC-CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 344555553111 35889999999999999999998753 469999999999999987642 357999
Q ss_pred EccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 458 IHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 458 ~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
++++..+- +.+ ..++|.|+.+.++
T Consensus 150 ~~~d~~~~---~~~--~~~fD~I~~~~~~ 173 (227)
T 1r18_A 150 VEGDGRKG---YPP--NAPYNAIHVGAAA 173 (227)
T ss_dssp EESCGGGC---CGG--GCSEEEEEECSCB
T ss_pred EECCcccC---CCc--CCCccEEEECCch
Confidence 88887541 111 1268999887664
No 127
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.74 E-value=0.026 Score=63.10 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=58.9
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----c-CCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----T-DSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++.++|+.+|.|+-|..++++- ..+|+|+|++++|++.+++. . ++++++++++..+....+.+.+ .++|.|
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~-~~fD~I 297 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRG-EKFDVI 297 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTT-CCEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcC-CCCCEE
Confidence 7899999999999999999862 45899999999999999764 2 3389999998766544333212 269999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|-
T Consensus 298 i~dp 301 (396)
T 3c0k_A 298 VMDP 301 (396)
T ss_dssp EECC
T ss_pred EECC
Confidence 9974
No 128
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.69 E-value=0.018 Score=59.85 Aligned_cols=69 Identities=10% Similarity=0.233 Sum_probs=56.3
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~ 465 (896)
..+.+++.+... +++.++|.-+|.|..|..++++. ++|+|+|+|+++++.+++.. .++++++++++.++
T Consensus 18 ~~~~i~~~~~~~---~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 18 NIDKIMTNIRLN---EHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHTTCCCC---TTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred HHHHHHHhCCCC---CCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC
Confidence 456666666654 48899999999999999999985 68999999999999997753 25789998887554
No 129
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=95.69 E-value=0.01 Score=60.23 Aligned_cols=82 Identities=13% Similarity=0.124 Sum_probs=59.3
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC---------CCeEEEccChh
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD---------SRFSIIHNCFT 463 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~---------~~~~~~~~~~~ 463 (896)
+.+.+.+... +++.++|.-+|.|..+..++++. +..+++|+|+++++++.+++... +++++++++..
T Consensus 19 ~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 19 GTVVAVLKSV---NAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHT---TCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHhhc---CCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 3344444443 47899999999999999999976 45799999999999999976421 27888888764
Q ss_pred cHHHHHHhcCCCcccEEEEe
Q psy2376 464 ELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 464 ~~~~~l~~~~~~~~d~il~d 483 (896)
..+. ...++|.|+..
T Consensus 95 ~~~~-----~~~~fD~V~~~ 109 (219)
T 3jwg_A 95 YRDK-----RFSGYDAATVI 109 (219)
T ss_dssp SCCG-----GGTTCSEEEEE
T ss_pred cccc-----ccCCCCEEEEH
Confidence 4321 01257887753
No 130
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=95.67 E-value=0.029 Score=59.28 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=56.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|...|.|..+..+++.. |..+++|+|+++++++.+++.. -+++++++++..+. +. -+++|.|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~---~~---~~~fD~Iv 181 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA---LA---GQQFAMIV 181 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---GT---TCCEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---cc---cCCccEEE
Confidence 36799999999999999999988 5689999999999999987641 24799999887553 11 12588888
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.|
T Consensus 182 ~n 183 (276)
T 2b3t_A 182 SN 183 (276)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 131
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.67 E-value=0.028 Score=57.32 Aligned_cols=83 Identities=12% Similarity=0.108 Sum_probs=62.5
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC--CCeEEEccChhcHHHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--SRFSIIHNCFTELDIILK 470 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 470 (896)
+.+++.+..+ +++.++|.-+|.|..+..+++.. .+|+|+|+++++++.+++... +++++++++..+. +.
T Consensus 60 ~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~---~~ 130 (231)
T 1vbf_A 60 IFMLDELDLH---KGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG---YE 130 (231)
T ss_dssp HHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC---CG
T ss_pred HHHHHhcCCC---CCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc---cc
Confidence 4455555543 48899999999999999999985 689999999999999987532 2799999887651 11
Q ss_pred hcCCCcccEEEEeccc
Q psy2376 471 KYNIKKIDGILFDLGI 486 (896)
Q Consensus 471 ~~~~~~~d~il~dlG~ 486 (896)
.. .++|.|+.+..+
T Consensus 131 ~~--~~fD~v~~~~~~ 144 (231)
T 1vbf_A 131 EE--KPYDRVVVWATA 144 (231)
T ss_dssp GG--CCEEEEEESSBB
T ss_pred cC--CCccEEEECCcH
Confidence 11 268999987543
No 132
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=95.63 E-value=0.028 Score=62.18 Aligned_cols=74 Identities=18% Similarity=0.230 Sum_probs=55.3
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCC--------
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNI-------- 474 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-------- 474 (896)
++.++|+.+|.|..|..+++.. .+|+|+|++++|++.|++.. -+++++++++..++...+.+.+.
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 5679999999999999888753 58999999999999987631 15799999987766543332110
Q ss_pred ---CcccEEEEe
Q psy2376 475 ---KKIDGILFD 483 (896)
Q Consensus 475 ---~~~d~il~d 483 (896)
.++|.|++|
T Consensus 291 ~~~~~fD~Vv~d 302 (369)
T 3bt7_A 291 LKSYQCETIFVD 302 (369)
T ss_dssp GGGCCEEEEEEC
T ss_pred cccCCCCEEEEC
Confidence 157888864
No 133
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=95.62 E-value=0.033 Score=58.59 Aligned_cols=79 Identities=18% Similarity=0.256 Sum_probs=63.1
Q ss_pred cchHHHhhhccccccccCcEEEEEccCC--ChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC----CCeEEEccChh
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQ--GGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD----SRFSIIHNCFT 463 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~--Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~----~~~~~~~~~~~ 463 (896)
..+..++.+|.... ....++|.=+|. +|.+..++++..|+++|+++|.||.+++.|++++. +++++++.+..
T Consensus 64 ~fl~rav~~l~~~~--g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~ 141 (277)
T 3giw_A 64 DWMNRAVAHLAKEA--GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADML 141 (277)
T ss_dssp HHHHHHHHHHHHTS--CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTT
T ss_pred HHHHHHHHHhcccc--CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEeccc
Confidence 45566777776431 236899999997 78999999988789999999999999999987632 47999999999
Q ss_pred cHHHHHH
Q psy2376 464 ELDIILK 470 (896)
Q Consensus 464 ~~~~~l~ 470 (896)
+.+.++.
T Consensus 142 ~~~~~l~ 148 (277)
T 3giw_A 142 DPASILD 148 (277)
T ss_dssp CHHHHHT
T ss_pred Chhhhhc
Confidence 9876654
No 134
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=95.58 E-value=0.032 Score=60.31 Aligned_cols=87 Identities=10% Similarity=0.200 Sum_probs=66.7
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDI 467 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~ 467 (896)
.+.+++.+..+ ++..++|.-+|.|+.+..++++.+++++|+|+|.++++++.+++.. -+++++++.+..+...
T Consensus 64 ~~~l~~~l~~~---~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 64 MALFMEWVGLD---KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHHHHHhcCCC---CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 45555666554 4889999999999999999999765689999999999999997642 2458999988866321
Q ss_pred HHHhcCCCcccEEEEeccc
Q psy2376 468 ILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 468 ~l~~~~~~~~d~il~dlG~ 486 (896)
.. .++|.|+.+-..
T Consensus 141 ---~~--~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 141 ---EF--SPYDVIFVTVGV 154 (317)
T ss_dssp ---GG--CCEEEEEECSBB
T ss_pred ---cC--CCeEEEEEcCCH
Confidence 11 268999988654
No 135
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.58 E-value=0.015 Score=58.81 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=59.5
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC---------CCeEEEccChh
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD---------SRFSIIHNCFT 463 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~---------~~~~~~~~~~~ 463 (896)
+.+.+.+... +++.++|.-+|.|..+..++++. +..+++|+|+++++++.+++... .++++++++..
T Consensus 19 ~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 19 NGVVAALKQS---NARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHT---TCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHhc---CCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4444444443 47899999999999999999875 45799999999999999976421 27888888764
Q ss_pred cHHHHHHhcCCCcccEEEEe
Q psy2376 464 ELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 464 ~~~~~l~~~~~~~~d~il~d 483 (896)
..+. ...++|.|+..
T Consensus 95 ~~~~-----~~~~fD~v~~~ 109 (217)
T 3jwh_A 95 YQDK-----RFHGYDAATVI 109 (217)
T ss_dssp SCCG-----GGCSCSEEEEE
T ss_pred cccc-----cCCCcCEEeeH
Confidence 3321 11257888754
No 136
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.57 E-value=0.015 Score=64.62 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=60.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|..+|.|+.+..+++.. +.++|+|+|+|+.+++.|++. ..++++++++++.+++. . ..++|.|
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~--~---~~~fD~I 290 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ--Y---VDSVDFA 290 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG--T---CSCEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc--c---cCCcCEE
Confidence 47899999999999999999875 456899999999999999764 23689999999988652 1 1368999
Q ss_pred EEecc
Q psy2376 481 LFDLG 485 (896)
Q Consensus 481 l~dlG 485 (896)
+.|.=
T Consensus 291 i~npP 295 (373)
T 3tm4_A 291 ISNLP 295 (373)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 98753
No 137
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.52 E-value=0.011 Score=61.21 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=58.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+|+.++|.-+|.|..+..++++. + .+++|+|++|+.++.|++. ...++++++++..++. ....-.++|+|.|
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~-~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~FD~i~~ 134 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA---PTLPDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSC-E-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG---GGSCTTCEEEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhC-C-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc---ccccccCCceEEE
Confidence 58999999999999999998875 3 4899999999999999875 2456778877765443 3333346999988
Q ss_pred eccc
Q psy2376 483 DLGI 486 (896)
Q Consensus 483 dlG~ 486 (896)
|-=+
T Consensus 135 D~~~ 138 (236)
T 3orh_A 135 DTYP 138 (236)
T ss_dssp CCCC
T ss_pred eeee
Confidence 8433
No 138
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.50 E-value=0.011 Score=62.27 Aligned_cols=89 Identities=12% Similarity=0.188 Sum_probs=64.5
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH------HHHHhhccc-----CCCeEEEcc
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE------SVSLGNKIT-----DSRFSIIHN 460 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~------a~~~~~~~~-----~~~~~~~~~ 460 (896)
..++++.+..+ +++.++|.-+|.|..+..++++.+++++|+|+|.+++ +++.+++.. .+++++++.
T Consensus 32 ~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 32 RLAIAEAWQVK---PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp HHHHHHHHTCC---TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred HHHHHHHcCCC---CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 34555655554 4889999999999999999999877789999999997 888886642 268999998
Q ss_pred C-hhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 461 C-FTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 461 ~-~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+ +.... +. ..-+++|.|+.+..+
T Consensus 109 d~~~~~~--~~-~~~~~fD~v~~~~~l 132 (275)
T 3bkx_A 109 TNLSDDL--GP-IADQHFDRVVLAHSL 132 (275)
T ss_dssp CCTTTCC--GG-GTTCCCSEEEEESCG
T ss_pred Chhhhcc--CC-CCCCCEEEEEEccch
Confidence 7 32211 11 112368999876433
No 139
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=95.47 E-value=0.023 Score=58.92 Aligned_cols=79 Identities=16% Similarity=0.069 Sum_probs=61.6
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDI 467 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~ 467 (896)
+.+++.+... ++..++|.-+|.|..+..++++. ..+++|+|.++++++.+++. ..+++++++.+..++..
T Consensus 26 ~~l~~~~~~~---~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 26 ATLGRVLRMK---PGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHTCCC---TTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHHHhcCCC---CCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 4455555543 58899999999999999999987 35899999999999999764 23689999998876531
Q ss_pred HHHhcCCCcccEEEE
Q psy2376 468 ILKKYNIKKIDGILF 482 (896)
Q Consensus 468 ~l~~~~~~~~d~il~ 482 (896)
-.++|.|+.
T Consensus 101 ------~~~fD~V~~ 109 (256)
T 1nkv_A 101 ------NEKCDVAAC 109 (256)
T ss_dssp ------SSCEEEEEE
T ss_pred ------CCCCCEEEE
Confidence 135888876
No 140
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.46 E-value=0.02 Score=59.44 Aligned_cols=82 Identities=12% Similarity=0.076 Sum_probs=64.6
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHh
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKK 471 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 471 (896)
..++++.+... ++..++|.-+|.|..+..++++. |.++++|+|.++++++.+++. ..++++++.++.+++ .
T Consensus 22 ~~~l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~d~~~~~---~- 92 (259)
T 2p35_A 22 ARDLLAQVPLE---RVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-LPNTNFGKADLATWK---P- 92 (259)
T ss_dssp HHHHHTTCCCS---CCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-STTSEEEECCTTTCC---C-
T ss_pred HHHHHHhcCCC---CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-CCCcEEEECChhhcC---c-
Confidence 34556655543 47899999999999999999998 467999999999999999775 467899998887654 1
Q ss_pred cCCCcccEEEEec
Q psy2376 472 YNIKKIDGILFDL 484 (896)
Q Consensus 472 ~~~~~~d~il~dl 484 (896)
-.++|.|+.+.
T Consensus 93 --~~~fD~v~~~~ 103 (259)
T 2p35_A 93 --AQKADLLYANA 103 (259)
T ss_dssp --SSCEEEEEEES
T ss_pred --cCCcCEEEEeC
Confidence 12689888754
No 141
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.42 E-value=0.013 Score=61.03 Aligned_cols=70 Identities=24% Similarity=0.307 Sum_probs=57.1
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL 465 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~ 465 (896)
..+++++.+... +++.++|.-+|.|..|..++++ +.++|+|+|+|+.+++.+++...++++++++++.++
T Consensus 19 i~~~iv~~~~~~---~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 19 VLKKIAEELNIE---EGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSIGDERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHTTCC---TTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred HHHHHHHhcCCC---CcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhC
Confidence 456667776664 4889999999999999999997 246999999999999999765345789999988654
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.40 E-value=0.031 Score=62.03 Aligned_cols=80 Identities=14% Similarity=0.221 Sum_probs=60.4
Q ss_pred HhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----C--CCeEEEccChhcHHH
Q psy2376 395 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----D--SRFSIIHNCFTELDI 467 (896)
Q Consensus 395 ~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~--~~~~~~~~~~~~~~~ 467 (896)
+++.+... +++.++|.-+|.|..+..++++. |..+|+|+|+++.+++.+++.. . .+++++.++..+-
T Consensus 214 ll~~l~~~---~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-- 287 (375)
T 4dcm_A 214 FMQHLPEN---LEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-- 287 (375)
T ss_dssp HHHTCCCS---CCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT--
T ss_pred HHHhCccc---CCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc--
Confidence 44555543 36899999999999999999997 5789999999999999997641 1 2577888876541
Q ss_pred HHHhcCCCcccEEEEec
Q psy2376 468 ILKKYNIKKIDGILFDL 484 (896)
Q Consensus 468 ~l~~~~~~~~d~il~dl 484 (896)
..-.++|.|+.|.
T Consensus 288 ----~~~~~fD~Ii~np 300 (375)
T 4dcm_A 288 ----VEPFRFNAVLCNP 300 (375)
T ss_dssp ----CCTTCEEEEEECC
T ss_pred ----CCCCCeeEEEECC
Confidence 1123689998873
No 143
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=95.38 E-value=0.039 Score=57.85 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=63.7
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELD 466 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~ 466 (896)
.+++++.+..+ ++..++|.-+|.|..+..++++. .++|+|+|.++++++.+++. ..+|+++++.++.+++
T Consensus 50 ~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 50 TDEMIALLDVR---SGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp HHHHHHHSCCC---TTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHhcCCC---CCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC
Confidence 45566666554 48899999999999999999986 46999999999999998764 2468999999887653
Q ss_pred HHHHhcCCCcccEEEEe
Q psy2376 467 IILKKYNIKKIDGILFD 483 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~d 483 (896)
..-.++|.|+..
T Consensus 125 -----~~~~~fD~v~~~ 136 (273)
T 3bus_A 125 -----FEDASFDAVWAL 136 (273)
T ss_dssp -----SCTTCEEEEEEE
T ss_pred -----CCCCCccEEEEe
Confidence 112368888864
No 144
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.38 E-value=0.026 Score=59.96 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=58.6
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-.|.|+-+..++++. +..++.++|+|+++++.+++.+ ++|+++++++..+. +++. -.++|
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~-~~~fD 153 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---LENV-TNTYD 153 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---HHHC-CSCEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH---HHhC-CCCce
Confidence 5789999999999999999874 5679999999999999998642 46899998876543 3322 23699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 154 ~Ii~d~ 159 (283)
T 2i7c_A 154 VIIVDS 159 (283)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999884
No 145
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=95.34 E-value=0.021 Score=64.72 Aligned_cols=83 Identities=14% Similarity=0.283 Sum_probs=59.5
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~ 468 (896)
+.+++.+... +++.++|..+|.|..+..++++ .++|+|+|++++|++.|++.. -+++++++++..+...-
T Consensus 276 ~~~~~~l~~~---~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~ 349 (433)
T 1uwv_A 276 ARALEWLDVQ---PEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK 349 (433)
T ss_dssp HHHHHHHTCC---TTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS
T ss_pred HHHHHhhcCC---CCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh
Confidence 4455555443 3789999999999999999987 469999999999999997641 24799999987652110
Q ss_pred HHhcCCCcccEEEE
Q psy2376 469 LKKYNIKKIDGILF 482 (896)
Q Consensus 469 l~~~~~~~~d~il~ 482 (896)
+. ..-.++|.|+.
T Consensus 350 ~~-~~~~~fD~Vv~ 362 (433)
T 1uwv_A 350 QP-WAKNGFDKVLL 362 (433)
T ss_dssp SG-GGTTCCSEEEE
T ss_pred hh-hhcCCCCEEEE
Confidence 00 01125888886
No 146
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.33 E-value=0.019 Score=62.78 Aligned_cols=67 Identities=22% Similarity=0.322 Sum_probs=55.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|+.+|.|+.+.. ++ + ..+|+|+|++++|++.+++. ..+++++++++..+.. .++|.|
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------~~fD~V 262 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------VKGNRV 262 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--------CCEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--------CCCcEE
Confidence 378999999999999999 77 2 57999999999999999763 2368999999876553 368999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
++|.
T Consensus 263 i~dp 266 (336)
T 2yx1_A 263 IMNL 266 (336)
T ss_dssp EECC
T ss_pred EECC
Confidence 9863
No 147
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.30 E-value=0.069 Score=56.41 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=62.7
Q ss_pred cchHHHhhhccccccccCcEEEEEccCC---ChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhc
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQ---GGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 464 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~---Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~ 464 (896)
.++++.++.+.... +...++|.-+|. |.-+..+.+. .|+++|+++|.||.+++.++++. .++++++++++.+
T Consensus 63 ~~~~~~~~~l~~~~--~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 63 KVLVRGVRFLAGEA--GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRD 139 (274)
T ss_dssp HHHHHHHHHHHTTT--CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTC
T ss_pred HHHHHHHHHHhhcc--CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCC
Confidence 34455566665221 247999999999 8655544444 46789999999999999998763 4689999999988
Q ss_pred HHHHHH------hcCCCcccEEEEe
Q psy2376 465 LDIILK------KYNIKKIDGILFD 483 (896)
Q Consensus 465 ~~~~l~------~~~~~~~d~il~d 483 (896)
.+..+. .+...++|+|+..
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~ 164 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLV 164 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEET
T ss_pred chhhhccchhhccCCCCCCEEEEEe
Confidence 764432 1222356666654
No 148
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=95.30 E-value=0.027 Score=58.11 Aligned_cols=75 Identities=13% Similarity=0.030 Sum_probs=58.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-CCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..++++.+ +|+|+|.++.+++.+++.. ..++++++.+..+++.......-..+|.|+.+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 578899999999999999999863 7999999999999998753 45899999999887643211000136788776
No 149
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.28 E-value=0.029 Score=60.27 Aligned_cols=73 Identities=15% Similarity=0.099 Sum_probs=58.1
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-+|.|+-+..+++.. +..+|+++|+|+++++.+++.. ++|++++.++..+. +.+..-.++|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~fD 171 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAF---VRQTPDNTYD 171 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---HHSSCTTCEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH---HHhccCCcee
Confidence 6789999999999999999874 5679999999999999987642 47899999887554 3321223699
Q ss_pred EEEEe
Q psy2376 479 GILFD 483 (896)
Q Consensus 479 ~il~d 483 (896)
.|+.|
T Consensus 172 vIi~d 176 (304)
T 3bwc_A 172 VVIID 176 (304)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99986
No 150
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.27 E-value=0.023 Score=63.30 Aligned_cols=78 Identities=14% Similarity=0.222 Sum_probs=62.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------C----CCeEEEccChhcHHHHHH-hc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------D----SRFSIIHNCFTELDIILK-KY 472 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~----~~~~~~~~~~~~~~~~l~-~~ 472 (896)
++..++|.-+|.|..+..+++..++.++|+|+|+++++++.+++.. + .++++++++..++..... ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 5889999999999999999999977889999999999999997642 1 689999999887642110 11
Q ss_pred CCCcccEEEEe
Q psy2376 473 NIKKIDGILFD 483 (896)
Q Consensus 473 ~~~~~d~il~d 483 (896)
.-.++|.|+.+
T Consensus 163 ~~~~fD~V~~~ 173 (383)
T 4fsd_A 163 PDSSVDIVISN 173 (383)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCEEEEEEc
Confidence 11368999887
No 151
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.27 E-value=0.018 Score=59.23 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=57.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..+.+.. ..+|+|+|.++++++.+++.. ..++++++++..++. +...-.++|.|+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA---PTLPDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG---GGSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh---cccCCCceEEEEE
Confidence 47899999999999999996643 248999999999999997652 467999999887652 2222236999998
Q ss_pred e
Q psy2376 483 D 483 (896)
Q Consensus 483 d 483 (896)
|
T Consensus 135 d 135 (236)
T 1zx0_A 135 D 135 (236)
T ss_dssp C
T ss_pred C
Confidence 6
No 152
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.26 E-value=0.05 Score=56.33 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=61.9
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-CCCeEEEccChhcHHHHHHhc
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-DSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 472 (896)
.+.+.+... +++.++|.-+|.|..+..++++. + .+++|+|.++++++.+++.. ..+++++++++.+++ .
T Consensus 35 ~l~~~~~~~---~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-----~ 104 (253)
T 3g5l_A 35 ELKKMLPDF---NQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA-----I 104 (253)
T ss_dssp HHHTTCCCC---TTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC-----C
T ss_pred HHHHhhhcc---CCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC-----C
Confidence 344444443 48899999999999999999984 3 38999999999999998754 478999999987653 1
Q ss_pred CCCcccEEEEe
Q psy2376 473 NIKKIDGILFD 483 (896)
Q Consensus 473 ~~~~~d~il~d 483 (896)
.-.++|.|+..
T Consensus 105 ~~~~fD~v~~~ 115 (253)
T 3g5l_A 105 EPDAYNVVLSS 115 (253)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCeEEEEEc
Confidence 12368988875
No 153
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.25 E-value=0.055 Score=60.87 Aligned_cols=82 Identities=12% Similarity=0.180 Sum_probs=58.3
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-------hcc---cC---CCeEEEc
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-------NKI---TD---SRFSIIH 459 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~-------~~~---~~---~~~~~~~ 459 (896)
.++++.+..+ +++.++|..+|.|..+..+++..+ ..+|+|+|+++++++.| ++. .+ +++++++
T Consensus 232 ~~ml~~l~l~---~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 232 SDVYQQCQLK---KGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHTTCC---TTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHhcCCC---CCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 4445555543 488999999999999999999884 46899999999999888 442 12 5788887
Q ss_pred c-Chhc---HHHHHHhcCCCcccEEEEe
Q psy2376 460 N-CFTE---LDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 460 ~-~~~~---~~~~l~~~~~~~~d~il~d 483 (896)
+ .+.+ +.... .++|.|+.+
T Consensus 308 gD~~~~~~~~~~~~-----~~FDvIvvn 330 (433)
T 1u2z_A 308 KKSFVDNNRVAELI-----PQCDVILVN 330 (433)
T ss_dssp SSCSTTCHHHHHHG-----GGCSEEEEC
T ss_pred cCcccccccccccc-----CCCCEEEEe
Confidence 4 5543 21111 257888853
No 154
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.25 E-value=0.023 Score=60.14 Aligned_cols=73 Identities=19% Similarity=0.185 Sum_probs=58.2
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-.|.|+-+..++++. +..+|.++|+|+++++.+++.+ ++|+++++++..+ ++++.. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~---~l~~~~-~~fD 150 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM---HIAKSE-NQYD 150 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH---HHHTCC-SCEE
T ss_pred CCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH---HHhhCC-CCee
Confidence 5789999999999999999874 4679999999999999998642 4789999988643 343322 4699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 151 ~Ii~d~ 156 (275)
T 1iy9_A 151 VIMVDS 156 (275)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 999863
No 155
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.21 E-value=0.037 Score=57.82 Aligned_cols=82 Identities=21% Similarity=0.235 Sum_probs=63.5
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHh
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKK 471 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 471 (896)
.+.+++.+... ++..++|.-+|.|..+..+++ +.++|+|+|.++.+++.+++.. ++++++++..+++
T Consensus 23 ~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~d~~~~~----- 89 (261)
T 3ege_A 23 VNAIINLLNLP---KGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP--QVEWFTGYAENLA----- 89 (261)
T ss_dssp HHHHHHHHCCC---TTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT--TEEEECCCTTSCC-----
T ss_pred HHHHHHHhCCC---CCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc--CCEEEECchhhCC-----
Confidence 34555555543 488999999999999999997 4579999999999999887654 8999999887653
Q ss_pred cCCCcccEEEEeccc
Q psy2376 472 YNIKKIDGILFDLGI 486 (896)
Q Consensus 472 ~~~~~~d~il~dlG~ 486 (896)
..-.++|.|+....+
T Consensus 90 ~~~~~fD~v~~~~~l 104 (261)
T 3ege_A 90 LPDKSVDGVISILAI 104 (261)
T ss_dssp SCTTCBSEEEEESCG
T ss_pred CCCCCEeEEEEcchH
Confidence 112368999887654
No 156
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.20 E-value=0.034 Score=58.98 Aligned_cols=71 Identities=15% Similarity=0.225 Sum_probs=56.9
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------------CCCeEEEccChhcHHHHHHhc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------------DSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~ 472 (896)
++.++|.-+|.|+-+..++++ +..+|.++|+|+++++.+++.+ ++|+++++++-.+ +++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~---~l~~- 149 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFE---FIKN- 149 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHH---HHHH-
T ss_pred CCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHH---Hhcc-
Confidence 578999999999999999998 4679999999999999987643 4678998877543 3333
Q ss_pred CCCcccEEEEec
Q psy2376 473 NIKKIDGILFDL 484 (896)
Q Consensus 473 ~~~~~d~il~dl 484 (896)
-.++|.|+.|.
T Consensus 150 -~~~fD~Ii~d~ 160 (281)
T 1mjf_A 150 -NRGFDVIIADS 160 (281)
T ss_dssp -CCCEEEEEEEC
T ss_pred -cCCeeEEEECC
Confidence 23699999874
No 157
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.18 E-value=0.045 Score=59.59 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=58.9
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
.+.++|.-.|.|+-+..++++. +..+|+++|+|+++++.|++.+ ++|+++++++..+ ++++..-.++|
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~---~l~~~~~~~fD 196 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA---FLKNAAEGSYD 196 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH---HHHTSCTTCEE
T ss_pred CCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH---HHHhccCCCcc
Confidence 5789999999999999999875 5679999999999999997642 4689999887644 34432223699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 197 lIi~d~ 202 (334)
T 1xj5_A 197 AVIVDS 202 (334)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999875
No 158
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.17 E-value=0.036 Score=53.45 Aligned_cols=76 Identities=18% Similarity=0.139 Sum_probs=59.6
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhc
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (896)
+++++.+... ++..++|.-+|.|..+..++++. .+++|+|.++++++.+++. .+++++++++ + ..
T Consensus 7 ~~~~~~~~~~---~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-~~~v~~~~~d-------~-~~ 71 (170)
T 3i9f_A 7 EEYLPNIFEG---KKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-FDSVITLSDP-------K-EI 71 (170)
T ss_dssp TTTHHHHHSS---CCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-CTTSEEESSG-------G-GS
T ss_pred HHHHHhcCcC---CCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-CCCcEEEeCC-------C-CC
Confidence 4555555554 47899999999999999999986 3899999999999999876 5678988887 1 12
Q ss_pred CCCcccEEEEe
Q psy2376 473 NIKKIDGILFD 483 (896)
Q Consensus 473 ~~~~~d~il~d 483 (896)
.-.++|.|+.+
T Consensus 72 ~~~~~D~v~~~ 82 (170)
T 3i9f_A 72 PDNSVDFILFA 82 (170)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCceEEEEEc
Confidence 22368999876
No 159
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.16 E-value=0.041 Score=61.19 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=57.0
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
++.++|+.+|.|+.|..++++ ..+|+|+|+++++++.+++.. -+++++++++..+....+...+ .++|.|+.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~-~~fD~Ii~ 285 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEG-ERFDLVVL 285 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcC-CCeeEEEE
Confidence 679999999999999999998 368999999999999997641 1348999998776644443222 26899996
Q ss_pred e
Q psy2376 483 D 483 (896)
Q Consensus 483 d 483 (896)
|
T Consensus 286 d 286 (382)
T 1wxx_A 286 D 286 (382)
T ss_dssp C
T ss_pred C
Confidence 4
No 160
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.15 E-value=0.025 Score=60.06 Aligned_cols=73 Identities=14% Similarity=0.117 Sum_probs=60.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
++..++|.-+|.|..+..+++.+++..+|+|+|.++.+++.+++.. ..++++++++..+++. . .++|.|+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~----~--~~fD~v~~ 95 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL----N--DKYDIAIC 95 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC----S--SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc----C--CCeeEEEE
Confidence 5789999999999999999999866689999999999999997652 3479999999876431 1 36899987
Q ss_pred ec
Q psy2376 483 DL 484 (896)
Q Consensus 483 dl 484 (896)
+.
T Consensus 96 ~~ 97 (284)
T 3gu3_A 96 HA 97 (284)
T ss_dssp ES
T ss_pred CC
Confidence 64
No 161
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.14 E-value=0.029 Score=59.19 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=63.3
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-CCCeEEEccChhcHHHHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-DSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-~~~~~~~~~~~~~~~~~l 469 (896)
..+.+++.+... ++ .++|.-.|.|..|..++++. ++|+|+|+|+++++.+++.. +++++++++++.+++-
T Consensus 35 i~~~Iv~~~~~~---~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~-- 105 (271)
T 3fut_A 35 HLRRIVEAARPF---TG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPW-- 105 (271)
T ss_dssp HHHHHHHHHCCC---CS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCG--
T ss_pred HHHHHHHhcCCC---CC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCCh--
Confidence 446667776665 47 99999999999999999974 58999999999999997753 4689999999876541
Q ss_pred HhcCCCcccEEEEec
Q psy2376 470 KKYNIKKIDGILFDL 484 (896)
Q Consensus 470 ~~~~~~~~d~il~dl 484 (896)
.+. ...|.|+-|+
T Consensus 106 ~~~--~~~~~iv~Nl 118 (271)
T 3fut_A 106 EEV--PQGSLLVANL 118 (271)
T ss_dssp GGS--CTTEEEEEEE
T ss_pred hhc--cCccEEEecC
Confidence 111 1356676666
No 162
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.11 E-value=0.037 Score=57.62 Aligned_cols=88 Identities=8% Similarity=0.113 Sum_probs=66.0
Q ss_pred hcccchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccCh
Q psy2376 387 MGFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCF 462 (896)
Q Consensus 387 l~~~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~ 462 (896)
.....++.+++.+..+ ++..++|.-+|.|..+..++++. .+|+|+|.++++++.+++.. .+++++++++.
T Consensus 21 ~~~~~~~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 94 (260)
T 1vl5_A 21 AKGSDLAKLMQIAALK---GNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA 94 (260)
T ss_dssp --CCCHHHHHHHHTCC---SCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred cCHHHHHHHHHHhCCC---CCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH
Confidence 3445667777777664 48899999999999999999875 38999999999999987642 25789999888
Q ss_pred hcHHHHHHhcCCCcccEEEEecc
Q psy2376 463 TELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 463 ~~~~~~l~~~~~~~~d~il~dlG 485 (896)
.+++ ..-.++|.|+....
T Consensus 95 ~~l~-----~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 95 EQMP-----FTDERFHIVTCRIA 112 (260)
T ss_dssp -CCC-----SCTTCEEEEEEESC
T ss_pred HhCC-----CCCCCEEEEEEhhh
Confidence 7653 11136899987754
No 163
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.11 E-value=0.013 Score=63.04 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=58.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|.-+|.|..+..++.+..+.++|+|+|+++.+++.+++.. .+|++++++++.+++ .. .++|.|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-~~fD~v 191 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-----TR-EGYDLL 191 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-----CC-SCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-----cc-CCeEEE
Confidence 4889999999999999999744457789999999999999998652 456999999987753 12 468988
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.+
T Consensus 192 ~~~ 194 (305)
T 3ocj_A 192 TSN 194 (305)
T ss_dssp ECC
T ss_pred EEC
Confidence 854
No 164
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.10 E-value=0.024 Score=60.32 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=58.9
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEE-ccChhcHHHHHHh
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSII-HNCFTELDIILKK 471 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 471 (896)
.+.++.+...+ ++..++|.-+|.|+.|..++++ +.++|+|+|+++..++.+.+. +.|+... ..|+..+.. ..
T Consensus 74 ~~~l~~~~~~~--~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~-~~rv~~~~~~ni~~l~~--~~ 146 (291)
T 3hp7_A 74 EKALAVFNLSV--EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ-DDRVRSMEQYNFRYAEP--VD 146 (291)
T ss_dssp HHHHHHTTCCC--TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT-CTTEEEECSCCGGGCCG--GG
T ss_pred HHHHHhcCCCc--cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh-CcccceecccCceecch--hh
Confidence 45566555432 4789999999999999999997 346999999999988775331 3455433 456555431 11
Q ss_pred cCCCcccEEEEecccC
Q psy2376 472 YNIKKIDGILFDLGIS 487 (896)
Q Consensus 472 ~~~~~~d~il~dlG~s 487 (896)
.....+|.+..|+-..
T Consensus 147 l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 147 FTEGLPSFASIDVSFI 162 (291)
T ss_dssp CTTCCCSEEEECCSSS
T ss_pred CCCCCCCEEEEEeeHh
Confidence 1222388888887544
No 165
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.08 E-value=0.031 Score=59.18 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=62.0
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDI 467 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~ 467 (896)
.++++.+.+ ++..++|.-+|.|..+..++++ ..+|+|+|.++++++.+++.. .+++++++++..++..
T Consensus 59 ~~~l~~~~~----~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 131 (285)
T 4htf_A 59 DRVLAEMGP----QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS 131 (285)
T ss_dssp HHHHHHTCS----SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG
T ss_pred HHHHHhcCC----CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh
Confidence 344444444 2679999999999999999987 458999999999999997642 2689999999987753
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
.. -.++|.|+.+
T Consensus 132 ~~----~~~fD~v~~~ 143 (285)
T 4htf_A 132 HL----ETPVDLILFH 143 (285)
T ss_dssp GC----SSCEEEEEEE
T ss_pred hc----CCCceEEEEC
Confidence 22 2368999876
No 166
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.08 E-value=0.049 Score=57.89 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=57.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|.-+|.|..+..++++.+ .+++|+|+++.+++.+++. ..+++++++.++.+++ ..-.++|.|
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v 154 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----CEDNSYDFI 154 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----SCTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-----CCCCCEeEE
Confidence 488999999999999999999873 5999999999999998764 2468999999887653 111358888
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+..
T Consensus 155 ~~~ 157 (297)
T 2o57_A 155 WSQ 157 (297)
T ss_dssp EEE
T ss_pred Eec
Confidence 765
No 167
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.07 E-value=0.023 Score=60.84 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=58.0
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-.|.|+-+..++++. +..+|+++|+|+++++.+++.+ .+|+++++++..+ +++.. -.++|
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~---~l~~~-~~~fD 165 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE---YVRKF-KNEFD 165 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH---HGGGC-SSCEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH---HHhhC-CCCce
Confidence 5789999999999999999975 4679999999999999987642 4689999887644 23322 23699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 166 ~Ii~d~ 171 (296)
T 1inl_A 166 VIIIDS 171 (296)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999873
No 168
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.07 E-value=0.058 Score=58.69 Aligned_cols=75 Identities=12% Similarity=0.007 Sum_probs=57.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCC-CeEEEccChhcHHHHHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDS-RFSIIHNCFTELDIILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~~~~~~d~ 479 (896)
++..++|+.+|.|+.+..+++. + .+|+|+|+++.+++.+++. .++ ++++++++..+....+...+ .++|.
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~-g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~-~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA-G--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRG-STYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-T--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHT-CCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcC-CCceE
Confidence 3679999999999999999985 2 3999999999999999764 233 59999998766543332111 26899
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+.|.
T Consensus 229 Ii~dP 233 (332)
T 2igt_A 229 ILTDP 233 (332)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99883
No 169
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=95.00 E-value=0.033 Score=56.29 Aligned_cols=71 Identities=15% Similarity=0.247 Sum_probs=53.6
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHH----hhcc----cCCCeEEEccCh
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSL----GNKI----TDSRFSIIHNCF 462 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~----~~~~----~~~~~~~~~~~~ 462 (896)
...+.++.+..+ +++.++|.-+|.|..+..++++. |.++|+|+|+++++++. +++. ..+++++++++.
T Consensus 15 ~~~~~~~~l~~~---~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~ 90 (218)
T 3mq2_A 15 FSDAEFEQLRSQ---YDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA 90 (218)
T ss_dssp CCHHHHHHHHTT---SSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS
T ss_pred cCHHHHHHhhcc---CCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch
Confidence 445666666664 48899999999999999999986 57899999999997764 3221 123678887777
Q ss_pred hcH
Q psy2376 463 TEL 465 (896)
Q Consensus 463 ~~~ 465 (896)
.++
T Consensus 91 ~~l 93 (218)
T 3mq2_A 91 ERL 93 (218)
T ss_dssp TTC
T ss_pred hhC
Confidence 654
No 170
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.99 E-value=0.054 Score=54.80 Aligned_cols=69 Identities=19% Similarity=0.295 Sum_probs=54.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.++|.-+|.|..+..++++. + +++|+|.++++++.+++. ...++++++.+..+++ ..-.++|.|+.+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~D~v~~~ 110 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----FEDKTFDYVIFI 110 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----SCTTCEEEEEEE
T ss_pred CCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-----CCCCcEEEEEEc
Confidence 6799999999999999988875 3 899999999999999764 2367899998876643 111368888865
No 171
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.97 E-value=0.026 Score=54.97 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=52.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEec
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dl 484 (896)
+++.++|..+|.|..+..++++. +|+|+|+++++++. .+++++++++..+. +.. +++|.|+.|.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~-----~~~~~~~~~d~~~~---~~~---~~fD~i~~n~ 86 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES-----HRGGNLVRADLLCS---INQ---ESVDVVVFNP 86 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT-----CSSSCEEECSTTTT---BCG---GGCSEEEECC
T ss_pred CCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc-----ccCCeEEECChhhh---ccc---CCCCEEEECC
Confidence 37799999999999999998874 89999999999987 46788888887551 111 3689999873
No 172
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=94.96 E-value=0.046 Score=56.03 Aligned_cols=80 Identities=13% Similarity=0.195 Sum_probs=60.6
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhc
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (896)
+.+++.+.+.. +++.++|.-+|.|..+..++++. + +|+|+|.++++++.+++....+++++++++.++ ..
T Consensus 31 ~~~~~~l~~~~--~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~---~~-- 100 (250)
T 2p7i_A 31 PFMVRAFTPFF--RPGNLLELGSFKGDFTSRLQEHF-N--DITCVEASEEAISHAQGRLKDGITYIHSRFEDA---QL-- 100 (250)
T ss_dssp HHHHHHHGGGC--CSSCEEEESCTTSHHHHHHTTTC-S--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC---CC--
T ss_pred HHHHHHHHhhc--CCCcEEEECCCCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc---Cc--
Confidence 44444444321 36789999999999999999875 3 699999999999999876544899999998776 11
Q ss_pred CCCcccEEEEe
Q psy2376 473 NIKKIDGILFD 483 (896)
Q Consensus 473 ~~~~~d~il~d 483 (896)
-.++|.|+..
T Consensus 101 -~~~fD~v~~~ 110 (250)
T 2p7i_A 101 -PRRYDNIVLT 110 (250)
T ss_dssp -SSCEEEEEEE
T ss_pred -CCcccEEEEh
Confidence 1368888875
No 173
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.91 E-value=0.055 Score=60.17 Aligned_cols=74 Identities=11% Similarity=-0.025 Sum_probs=56.7
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCC-CeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDS-RFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++.++|+.+|.|+-|..++++- ..+|+|+|++++|++.|++. .++ ++++++++..+....+.+.+ .++|.|
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~-~~fD~I 289 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHH-LTYDII 289 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTT-CCEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhC-CCccEE
Confidence 7899999999999999999852 34899999999999999763 233 89999998665433332212 258999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.|
T Consensus 290 i~D 292 (385)
T 2b78_A 290 IID 292 (385)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 174
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.91 E-value=0.075 Score=57.19 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=58.6
Q ss_pred cEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 408 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 408 ~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
..++|.-+|.|+-+..+++++ |+.++.++|+|+++++.+++.+ ++|+++++++-.+ ++++..-.++|.|+.|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~---~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARM---VAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHH---HHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHH---HHhhccCCCCCEEEEC
Confidence 388999999999999999987 4669999999999999998753 4689999887654 4444323479999998
No 175
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=94.90 E-value=0.082 Score=54.05 Aligned_cols=78 Identities=13% Similarity=0.038 Sum_probs=59.2
Q ss_pred HhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-CCCeEEEccChhcHHHHHHhcC
Q psy2376 395 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-DSRFSIIHNCFTELDIILKKYN 473 (896)
Q Consensus 395 ~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 473 (896)
+.+.+... +++.++|.-+|.|..+..++++ +. .+++|+|.++++++.+++.. ..++++++.+..+++ ..
T Consensus 35 l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-----~~ 104 (243)
T 3bkw_A 35 LRAMLPEV---GGLRIVDLGCGFGWFCRWAHEH-GA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH-----LP 104 (243)
T ss_dssp HHHHSCCC---TTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-----CC
T ss_pred HHHhcccc---CCCEEEEEcCcCCHHHHHHHHC-CC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-----CC
Confidence 44444433 4789999999999999999987 32 38999999999999998753 357899988886653 11
Q ss_pred CCcccEEEE
Q psy2376 474 IKKIDGILF 482 (896)
Q Consensus 474 ~~~~d~il~ 482 (896)
-.++|.|+.
T Consensus 105 ~~~fD~v~~ 113 (243)
T 3bkw_A 105 QDSFDLAYS 113 (243)
T ss_dssp TTCEEEEEE
T ss_pred CCCceEEEE
Confidence 236888886
No 176
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=94.90 E-value=0.032 Score=57.15 Aligned_cols=74 Identities=20% Similarity=0.155 Sum_probs=52.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHH-HH---hhccc----CCCeEEEccChhcHHHHHHhcCCCcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV-SL---GNKIT----DSRFSIIHNCFTELDIILKKYNIKKI 477 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~-~~---~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~ 477 (896)
+++.++|.-+|.|..+..++++. ++.+|+|+|.+++++ +. |++.. -.++++++.+..+++... . ..+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~--~--d~v 98 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL--K--NIA 98 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG--T--TCE
T ss_pred CCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc--c--CeE
Confidence 48899999999999999999875 678999999995554 44 45431 246888888877663211 1 245
Q ss_pred cEEEEec
Q psy2376 478 DGILFDL 484 (896)
Q Consensus 478 d~il~dl 484 (896)
|.+..++
T Consensus 99 ~~i~~~~ 105 (225)
T 3p2e_A 99 DSISILF 105 (225)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 6655544
No 177
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=94.89 E-value=0.081 Score=55.13 Aligned_cols=87 Identities=9% Similarity=0.056 Sum_probs=62.6
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC--CCeEEEccChhcH--H
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--SRFSIIHNCFTEL--D 466 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~--~~~~~~~~~~~~~--~ 466 (896)
+.+.+++.+... +++.++|.-.|.|..|. +++. +..+|+|+|+|+++++.+++... ++++++++++.++ .
T Consensus 9 i~~~iv~~~~~~---~~~~VLEIG~G~G~lt~--l~~~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 9 VIDSIVSAINPQ---KGQAMVEIGPGLAALTE--PVGE-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHHCCC---TTCCEEEECCTTTTTHH--HHHT-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHH
T ss_pred HHHHHHHhcCCC---CcCEEEEECCCCcHHHH--hhhC-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHH
Confidence 456666766664 48899999999999999 5653 33349999999999999987543 5899999998764 3
Q ss_pred HHHHhcCCCcccEEEEecc
Q psy2376 467 IILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~dlG 485 (896)
+..... ...|.|+.|+-
T Consensus 83 ~~~~~~--~~~~~vvsNlP 99 (252)
T 1qyr_A 83 ELAEKM--GQPLRVFGNLP 99 (252)
T ss_dssp HHHHHH--TSCEEEEEECC
T ss_pred Hhhccc--CCceEEEECCC
Confidence 332100 12467777774
No 178
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=94.88 E-value=0.019 Score=60.25 Aligned_cols=87 Identities=17% Similarity=0.001 Sum_probs=59.3
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHH-HH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI-IL 469 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~-~l 469 (896)
..+.+++.+... ++..++|.-+|.|..|..++++ ..+|+|+|.++.+++.+++....+ .++.++.+++. ..
T Consensus 33 ~~~~il~~l~l~---~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 33 DRENDIFLENIV---PGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHHTTTCC---TTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCC
T ss_pred HHHHHHHhcCCC---CcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc--cceeeeeecccccc
Confidence 456666766654 4889999999999999999986 358999999999999998764433 23344433321 00
Q ss_pred HhcCCCcccEEEEeccc
Q psy2376 470 KKYNIKKIDGILFDLGI 486 (896)
Q Consensus 470 ~~~~~~~~d~il~dlG~ 486 (896)
... -.++|.|+.|..+
T Consensus 105 ~~~-~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 105 KEL-AGHFDFVLNDRLI 120 (261)
T ss_dssp GGG-TTCCSEEEEESCG
T ss_pred ccc-CCCccEEEEhhhh
Confidence 000 1257888777554
No 179
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=94.88 E-value=0.044 Score=56.26 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=61.2
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~ 468 (896)
..+++.+..+ +++.++|.-+|.|..+..+++..+ ++|+|+|+++++++.+++.. -++++++.++... -
T Consensus 81 ~~~~~~l~~~---~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~ 152 (235)
T 1jg1_A 81 AIMLEIANLK---PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---G 152 (235)
T ss_dssp HHHHHHHTCC---TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C
T ss_pred HHHHHhcCCC---CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc---C
Confidence 4445555443 478999999999999999999985 78999999999999997642 1458888887621 1
Q ss_pred HHhcCCCcccEEEEeccc
Q psy2376 469 LKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 469 l~~~~~~~~d~il~dlG~ 486 (896)
+.+. .++|.|+.+.+.
T Consensus 153 ~~~~--~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 153 FPPK--APYDVIIVTAGA 168 (235)
T ss_dssp CGGG--CCEEEEEECSBB
T ss_pred CCCC--CCccEEEECCcH
Confidence 1111 248999987543
No 180
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=94.86 E-value=0.028 Score=62.30 Aligned_cols=73 Identities=15% Similarity=0.070 Sum_probs=56.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C-CCeEEEccChhc-HHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D-SRFSIIHNCFTE-LDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~-~~~~~~~~~~~~-~~~~l~~~~~~~~d~i 480 (896)
+++.++|.- |.|..+..+++.. +.++|+|+|+|+++++.+++.. + +|+++++++..+ ++... -.++|.|
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~----~~~fD~V 245 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYA----LHKFDTF 245 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTT----SSCBSEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhc----cCCccEE
Confidence 478999999 9999999998764 5679999999999999997641 1 289999998766 42111 1258999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|.
T Consensus 246 i~~~ 249 (373)
T 2qm3_A 246 ITDP 249 (373)
T ss_dssp EECC
T ss_pred EECC
Confidence 8863
No 181
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.86 E-value=0.039 Score=59.28 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=58.4
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-.|.|+-+..++++. +..+|.++|+|+++++.+++.+ .+|+++++++..+ +++.. -.++|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~---~l~~~-~~~fD 170 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE---FMKQN-QDAFD 170 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH---HHHTC-SSCEE
T ss_pred CCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH---HHhhC-CCCce
Confidence 5789999999999999999875 5679999999999999997642 5789999887644 34332 23699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 171 ~Ii~d~ 176 (304)
T 2o07_A 171 VIITDS 176 (304)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999973
No 182
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.83 E-value=0.041 Score=59.64 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=58.2
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-.|.|+-+..++++. +..+|.++|+|+++++.+++.. ++|+++++++..+. +++. -+++|
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~-~~~fD 191 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---LENV-TNTYD 191 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---HHHC-CSCEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH---Hhhc-CCCce
Confidence 5789999999999999999875 5679999999999999997642 46899999886543 3222 23699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 192 vIi~d~ 197 (321)
T 2pt6_A 192 VIIVDS 197 (321)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999984
No 183
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.82 E-value=0.042 Score=59.36 Aligned_cols=73 Identities=18% Similarity=0.253 Sum_probs=58.4
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---------CCCeEEEccChhcHHHHHHhcCCCcc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---------DSRFSIIHNCFTELDIILKKYNIKKI 477 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~ 477 (896)
++.++|.-+|.|+-+..++++. +..++.++|+|+++++.+++.+ ++|+++++++..+. ++.. -.++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~-~~~f 152 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY---LERT-EERY 152 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH---HHHC-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH---HHhc-CCCc
Confidence 5789999999999999999975 4679999999999999997642 46899998886553 3322 2369
Q ss_pred cEEEEec
Q psy2376 478 DGILFDL 484 (896)
Q Consensus 478 d~il~dl 484 (896)
|.|+.|.
T Consensus 153 D~Ii~d~ 159 (314)
T 1uir_A 153 DVVIIDL 159 (314)
T ss_dssp EEEEEEC
T ss_pred cEEEECC
Confidence 9999984
No 184
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.82 E-value=0.07 Score=55.08 Aligned_cols=78 Identities=13% Similarity=0.226 Sum_probs=58.4
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l 469 (896)
++.++....+ +++.++|.-+|.|.++..++++ ..+|+|+|.++++++.+++. .+.++++++++..+++
T Consensus 31 ~~~~~~~~~~---~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~--- 101 (252)
T 1wzn_A 31 EEIFKEDAKR---EVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--- 101 (252)
T ss_dssp HHHHHHTCSS---CCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC---
T ss_pred HHHHHHhccc---CCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc---
Confidence 4444443332 4789999999999999999986 35899999999999999764 2347889998887653
Q ss_pred HhcCCCcccEEEE
Q psy2376 470 KKYNIKKIDGILF 482 (896)
Q Consensus 470 ~~~~~~~~d~il~ 482 (896)
.. .++|.|+.
T Consensus 102 --~~-~~fD~v~~ 111 (252)
T 1wzn_A 102 --FK-NEFDAVTM 111 (252)
T ss_dssp --CC-SCEEEEEE
T ss_pred --cC-CCccEEEE
Confidence 11 35788875
No 185
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=94.81 E-value=0.082 Score=54.08 Aligned_cols=69 Identities=14% Similarity=0.262 Sum_probs=56.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-cCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..++++ ..+++|+|.++.+++.+++. ...++++++.+..+++ ..-.++|.|+.
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP-----FENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS-----SCTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC-----CCCCCccEEEE
Confidence 4789999999999999999997 35899999999999999875 3578999999887753 11236888886
No 186
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=94.77 E-value=0.067 Score=55.23 Aligned_cols=80 Identities=13% Similarity=0.035 Sum_probs=61.2
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC--CCeEEEccChhcHHHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--SRFSIIHNCFTELDIILK 470 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 470 (896)
+++++.+... ++..++|.-+|.|..+..++++. ..+++|+|.++.+++.+++... +++++++.+..+++
T Consensus 83 ~~~l~~l~~~---~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 153 (254)
T 1xtp_A 83 RNFIASLPGH---GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---- 153 (254)
T ss_dssp HHHHHTSTTC---CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC----
T ss_pred HHHHHhhccc---CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC----
Confidence 4445555433 47899999999999999999986 4589999999999999987543 57889988876643
Q ss_pred hcCCCcccEEEE
Q psy2376 471 KYNIKKIDGILF 482 (896)
Q Consensus 471 ~~~~~~~d~il~ 482 (896)
..-.++|.|+.
T Consensus 154 -~~~~~fD~v~~ 164 (254)
T 1xtp_A 154 -LPPNTYDLIVI 164 (254)
T ss_dssp -CCSSCEEEEEE
T ss_pred -CCCCCeEEEEE
Confidence 11236888886
No 187
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=94.74 E-value=0.036 Score=55.36 Aligned_cols=84 Identities=10% Similarity=0.097 Sum_probs=58.8
Q ss_pred cchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHH
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELD 466 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~ 466 (896)
....+.++.+... ++++.++|+-+|.|..+..++... ..+++|+|.++++++.+++. ...++++++.+..+++
T Consensus 9 ~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 84 (209)
T 2p8j_A 9 PQLYRFLKYCNES--NLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP 84 (209)
T ss_dssp THHHHHHHHHHHS--SSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC
T ss_pred hhHHHHHHHHhcc--CCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC
Confidence 3445555555543 257899999999999877777653 46999999999999998764 2356778887776542
Q ss_pred HHHHhcCCCcccEEEE
Q psy2376 467 IILKKYNIKKIDGILF 482 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~ 482 (896)
..-.++|.|+.
T Consensus 85 -----~~~~~fD~v~~ 95 (209)
T 2p8j_A 85 -----FKDESMSFVYS 95 (209)
T ss_dssp -----SCTTCEEEEEE
T ss_pred -----CCCCceeEEEE
Confidence 11125777775
No 188
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=94.74 E-value=0.056 Score=53.35 Aligned_cols=80 Identities=19% Similarity=0.152 Sum_probs=60.3
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDI 467 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~ 467 (896)
..++++.+... +++.++|.-+|.|..+..++++ ..+++|+|.++++++.+++.. .+++++++.+..+++.
T Consensus 21 ~~~l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 94 (199)
T 2xvm_A 21 HSEVLEAVKVV---KPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF 94 (199)
T ss_dssp CHHHHHHTTTS---CSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC
T ss_pred cHHHHHHhhcc---CCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC
Confidence 34555555543 3779999999999999999987 359999999999999987642 2368999888876531
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
-.++|.|+.+
T Consensus 95 ------~~~~D~v~~~ 104 (199)
T 2xvm_A 95 ------DRQYDFILST 104 (199)
T ss_dssp ------CCCEEEEEEE
T ss_pred ------CCCceEEEEc
Confidence 2358888854
No 189
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.73 E-value=0.11 Score=53.23 Aligned_cols=71 Identities=11% Similarity=0.124 Sum_probs=56.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|.-.|.|..+..++++ ..+++++|+++++++.+++. .++++++++.+..+.. + .-.++|.|
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~---~~~~~D~v 162 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE--V---PEGIFHAA 162 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC--C---CTTCBSEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc--c---CCCcccEE
Confidence 4889999999999999999998 46999999999999999764 2368999988875521 0 11358999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|.
T Consensus 163 ~~~~ 166 (248)
T 2yvl_A 163 FVDV 166 (248)
T ss_dssp EECS
T ss_pred EECC
Confidence 8753
No 190
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.71 E-value=0.049 Score=58.77 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=58.2
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
.+.++|.-.|.|+-+..++++. +..+|.++|+|+++++.|++.+ ++|+++++++..+. ++.. -.++|
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~-~~~fD 183 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF---LKNH-KNEFD 183 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH---HHHC-TTCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH---HHhc-CCCce
Confidence 5789999999999999999875 5689999999999999998642 46899998876542 3321 23699
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|.
T Consensus 184 ~Ii~d~ 189 (314)
T 2b2c_A 184 VIITDS 189 (314)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999875
No 191
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.67 E-value=0.087 Score=55.22 Aligned_cols=74 Identities=15% Similarity=0.194 Sum_probs=59.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|.-+|.|..+..++++. |.++++|+|.++.+++.+++.. .+++++++.+..+++ ..-.++|.|+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~ 110 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-----FEDSSFDHIF 110 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-----SCTTCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-----CCCCCeeEEE
Confidence 58899999999999999999996 5689999999999999987642 257899988877653 1123689998
Q ss_pred Eecc
Q psy2376 482 FDLG 485 (896)
Q Consensus 482 ~dlG 485 (896)
.+.-
T Consensus 111 ~~~~ 114 (276)
T 3mgg_A 111 VCFV 114 (276)
T ss_dssp EESC
T ss_pred Eech
Confidence 7653
No 192
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=94.67 E-value=0.071 Score=53.26 Aligned_cols=72 Identities=11% Similarity=0.027 Sum_probs=55.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccC--CCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--SRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++..++|.-+|.|..+..++++. +. +++|+|+++.+++.+++... +++++++.+..+++ ..-.++|.|+.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~v~~~ 114 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGG-FP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-----FPSASFDVVLEK 114 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTT-CC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-----SCSSCEEEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHHcC-CC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-----CCCCcccEEEEC
Confidence 47899999999999999999874 33 89999999999999987532 57888888876642 112357877765
Q ss_pred c
Q psy2376 484 L 484 (896)
Q Consensus 484 l 484 (896)
.
T Consensus 115 ~ 115 (215)
T 2pxx_A 115 G 115 (215)
T ss_dssp S
T ss_pred c
Confidence 3
No 193
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=94.66 E-value=0.06 Score=56.12 Aligned_cols=69 Identities=13% Similarity=0.020 Sum_probs=53.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---------------------CCCeEEEccChhc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---------------------DSRFSIIHNCFTE 464 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---------------------~~~~~~~~~~~~~ 464 (896)
+++.++|.-+|.|.++..|+++ ..+|+|+|.++.+++.|++.. ..+++++++++.+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 4789999999999999999986 348999999999999986532 2578888888877
Q ss_pred HHHHHHhcCCCcccEEE
Q psy2376 465 LDIILKKYNIKKIDGIL 481 (896)
Q Consensus 465 ~~~~l~~~~~~~~d~il 481 (896)
++. ...+++|+|+
T Consensus 145 l~~----~~~~~FD~V~ 157 (252)
T 2gb4_A 145 LPR----ANIGKFDRIW 157 (252)
T ss_dssp GGG----GCCCCEEEEE
T ss_pred CCc----ccCCCEEEEE
Confidence 642 1113577776
No 194
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=94.61 E-value=0.039 Score=61.96 Aligned_cols=66 Identities=18% Similarity=0.186 Sum_probs=54.7
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.++|..+|.|+-+..++++.++..+++|+|+|+++++.| ++++++++++.+.. ..+++|.|+.|
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----~~~~~~~~D~~~~~------~~~~fD~Ii~N 105 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----PWAEGILADFLLWE------PGEAFDLILGN 105 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----TTEEEEESCGGGCC------CSSCEEEEEEC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----CCCcEEeCChhhcC------ccCCCCEEEEC
Confidence 66999999999999999999986668999999999998777 57889988876532 11368888887
No 195
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.59 E-value=0.054 Score=55.21 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=55.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChh-cHHHHHHhcC-CCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFT-ELDIILKKYN-IKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..++++ ..+|+|+|.++.+++.+++. ..++++++.+.. .++ .. -.++|.|+.+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~d~~~~~~-----~~~~~~fD~v~~~ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-APHADVYEWNGKGELP-----AGLGAPFGLIVSR 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-CTTSEEEECCSCSSCC-----TTCCCCEEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-CCCceEEEcchhhccC-----CcCCCCEEEEEeC
Confidence 4789999999999999999998 35999999999999999876 457899998873 332 11 2368988765
No 196
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.58 E-value=0.072 Score=54.05 Aligned_cols=70 Identities=14% Similarity=0.215 Sum_probs=55.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---------CCCeEEEccChhcHHHHHHhcCCCc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---------DSRFSIIHNCFTELDIILKKYNIKK 476 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~ 476 (896)
+++.++|.-+|.|..+..++++ ..+++|+|+++.+++.+++.. .++++++..+..+++ ..-.+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~ 101 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-----FHDSS 101 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-----SCTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-----CCCCc
Confidence 4789999999999999999997 358999999999999997642 236788888876653 11236
Q ss_pred ccEEEEe
Q psy2376 477 IDGILFD 483 (896)
Q Consensus 477 ~d~il~d 483 (896)
+|.|+.+
T Consensus 102 ~D~v~~~ 108 (235)
T 3sm3_A 102 FDFAVMQ 108 (235)
T ss_dssp EEEEEEE
T ss_pred eeEEEEc
Confidence 8888875
No 197
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=94.56 E-value=0.05 Score=54.88 Aligned_cols=84 Identities=13% Similarity=0.029 Sum_probs=61.5
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhc
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (896)
.++++.+... ++..++|.-+|.|..+..++++ ..+++|+|.++++++.+++. .+..+++.++.++..... .
T Consensus 42 ~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~-~ 112 (227)
T 3e8s_A 42 QAILLAILGR---QPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA--GAGEVHLASYAQLAEAKV-P 112 (227)
T ss_dssp HHHHHHHHHT---CCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT--CSSCEEECCHHHHHTTCS-C
T ss_pred HHHHHHhhcC---CCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh--cccccchhhHHhhccccc-c
Confidence 3445555543 3689999999999999999987 35899999999999999875 567788888776632211 1
Q ss_pred CCCcccEEEEecc
Q psy2376 473 NIKKIDGILFDLG 485 (896)
Q Consensus 473 ~~~~~d~il~dlG 485 (896)
.-.++|.|+.+..
T Consensus 113 ~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 113 VGKDYDLICANFA 125 (227)
T ss_dssp CCCCEEEEEEESC
T ss_pred cCCCccEEEECch
Confidence 1124899888643
No 198
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.53 E-value=0.042 Score=57.91 Aligned_cols=83 Identities=12% Similarity=0.179 Sum_probs=64.9
Q ss_pred ccchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHH
Q psy2376 389 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII 468 (896)
Q Consensus 389 ~~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (896)
..+.+++++.+... ++..++|.-+|.|..+..+++ +.++|+|+|.++++++.+++.. .++++++.+..+++
T Consensus 43 ~~~~~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~d~~~~~-- 113 (279)
T 3ccf_A 43 WQYGEDLLQLLNPQ---PGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-PHLHFDVADARNFR-- 113 (279)
T ss_dssp SSSCCHHHHHHCCC---TTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-TTSCEEECCTTTCC--
T ss_pred HHHHHHHHHHhCCC---CCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-CCCEEEECChhhCC--
Confidence 34667777777654 478999999999999999998 4579999999999999997754 57888888877654
Q ss_pred HHhcCCCcccEEEEec
Q psy2376 469 LKKYNIKKIDGILFDL 484 (896)
Q Consensus 469 l~~~~~~~~d~il~dl 484 (896)
. -.++|.|+...
T Consensus 114 ---~-~~~fD~v~~~~ 125 (279)
T 3ccf_A 114 ---V-DKPLDAVFSNA 125 (279)
T ss_dssp ---C-SSCEEEEEEES
T ss_pred ---c-CCCcCEEEEcc
Confidence 1 13688888764
No 199
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=94.52 E-value=0.049 Score=55.97 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=56.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++..++|.-+|.|..+..++++. ..+++|+|.++++++.+++.. ..++++++.+..+++ ..-.++|.|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-----PEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-----CCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-----CCCCCEEEEE
Confidence 47899999999999999999886 458999999999999998753 235888888876543 1112588888
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
.+
T Consensus 152 ~~ 153 (241)
T 2ex4_A 152 IQ 153 (241)
T ss_dssp EE
T ss_pred Ec
Confidence 66
No 200
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=94.52 E-value=0.041 Score=57.42 Aligned_cols=69 Identities=9% Similarity=0.256 Sum_probs=56.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEec
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dl 484 (896)
+++.++|.-+|.|..+..++++. .+|+|+|.++++++.+++... ++++++++..+++. -.++|.|+...
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~-~~~~~~~d~~~~~~------~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNP-DAVLHHGDMRDFSL------GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCT-TSEEEECCTTTCCC------SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC-CCEEEECChHHCCc------cCCcCEEEEcC
Confidence 36899999999999999999873 489999999999999987643 78999988876542 13688888654
No 201
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=94.45 E-value=0.041 Score=61.20 Aligned_cols=75 Identities=12% Similarity=0.045 Sum_probs=58.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCC-eEEEccChhcHHHHHH-hcCCCccc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSR-FSIIHNCFTELDIILK-KYNIKKID 478 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~-~~~~~~~~~~~~~~l~-~~~~~~~d 478 (896)
++..++|+-.|.|+=+..++++.+...+|+++|+|++|++.+++. .+++ +++++++-.+ +++ +.+ .++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~---~l~~~~~-~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANF---FLRKEWG-FGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH---HHHSCCS-SCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHH---HHHHhhC-CCCc
Confidence 488999999999999999999864336899999999999998763 3455 8998887543 444 321 3689
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|++|-
T Consensus 128 ~V~lDP 133 (392)
T 3axs_A 128 YVDLDP 133 (392)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999986
No 202
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=94.43 E-value=0.054 Score=54.35 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=53.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..++++ ..+++|+|.++++++.+++.. ++++++.++.+++ .-.++|.|+.+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--~~~~~~~d~~~~~------~~~~fD~v~~~ 109 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL--GRPVRTMLFHQLD------AIDAYDAVWAH 109 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH--TSCCEECCGGGCC------CCSCEEEEEEC
T ss_pred CCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc--CCceEEeeeccCC------CCCcEEEEEec
Confidence 4789999999999999999987 358999999999999998754 5667777777665 12368888764
No 203
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.42 E-value=0.029 Score=60.35 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=58.9
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----------CCCeEEEc
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----------DSRFSIIH 459 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----------~~~~~~~~ 459 (896)
+.+++++.+.... +++..++|..+|.|+++..+++. +..+++|+|+++++++.+++.. ..++++++
T Consensus 20 l~~~~~~~l~~~~-~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 96 (313)
T 3bgv_A 20 LIGEFLEKVRQKK-KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT 96 (313)
T ss_dssp HHHHHHHHHHHTC---CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE
T ss_pred HHHHHHHHhhhcc-CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEE
Confidence 3344444443321 14779999999999999999984 4579999999999999987642 13678888
Q ss_pred cChhcHHH--HHHhcCCCcccEEEEec
Q psy2376 460 NCFTELDI--ILKKYNIKKIDGILFDL 484 (896)
Q Consensus 460 ~~~~~~~~--~l~~~~~~~~d~il~dl 484 (896)
.+..+++- -++. .-.++|.|+...
T Consensus 97 ~D~~~~~~~~~~~~-~~~~fD~V~~~~ 122 (313)
T 3bgv_A 97 ADSSKELLIDKFRD-PQMCFDICSCQF 122 (313)
T ss_dssp CCTTTSCSTTTCSS-TTCCEEEEEEET
T ss_pred ecccccchhhhccc-CCCCEEEEEEec
Confidence 87765420 0100 112577777653
No 204
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.41 E-value=0.071 Score=55.74 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=59.6
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHH
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILK 470 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~ 470 (896)
..+++++.|.... ..++.++|+-+|.|..+..++++. .+|+|+|.++.+++.|++ ..++++++++.++++
T Consensus 25 yp~~l~~~l~~~~-~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~--~~~v~~~~~~~e~~~---- 94 (257)
T 4hg2_A 25 YPRALFRWLGEVA-PARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR--HPRVTYAVAPAEDTG---- 94 (257)
T ss_dssp CCHHHHHHHHHHS-SCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC--CTTEEEEECCTTCCC----
T ss_pred cHHHHHHHHHHhc-CCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh--cCCceeehhhhhhhc----
Confidence 3456666665432 135789999999999999999874 489999999999998876 357888888876653
Q ss_pred hcCCCcccEEEE
Q psy2376 471 KYNIKKIDGILF 482 (896)
Q Consensus 471 ~~~~~~~d~il~ 482 (896)
..-..+|.|+.
T Consensus 95 -~~~~sfD~v~~ 105 (257)
T 4hg2_A 95 -LPPASVDVAIA 105 (257)
T ss_dssp -CCSSCEEEEEE
T ss_pred -ccCCcccEEEE
Confidence 11235777764
No 205
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.39 E-value=0.075 Score=53.44 Aligned_cols=69 Identities=16% Similarity=0.103 Sum_probs=57.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..++++. .+++|+|+++++++.+++.. .+++++++.+..++. . -.++|.|+.+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---~---~~~fD~v~~~ 121 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS---T---AELFDLIVVA 121 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC---C---SCCEEEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC---C---CCCccEEEEc
Confidence 47899999999999999999874 58999999999999998753 347999999987765 1 2368988875
No 206
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=94.33 E-value=0.026 Score=60.31 Aligned_cols=77 Identities=13% Similarity=0.182 Sum_probs=58.2
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---C----CCeEEEccChhcH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---D----SRFSIIHNCFTEL 465 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~----~~~~~~~~~~~~~ 465 (896)
+++++.+.++ ++.++|.-+|.|..+..++++ ..+|+|+|+++.+++.+++.. . ++++++++++.++
T Consensus 73 ~~~~~~~~~~----~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 73 REFATRTGPV----SGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHHHHCCC----CSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred HHHHHhhCCC----CCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 3444444442 458999999999999999997 358999999999999998652 1 6799999988775
Q ss_pred HHHHHhcCCCcccEEEE
Q psy2376 466 DIILKKYNIKKIDGILF 482 (896)
Q Consensus 466 ~~~l~~~~~~~~d~il~ 482 (896)
+. -.++|.|++
T Consensus 146 ~~------~~~fD~v~~ 156 (299)
T 3g2m_A 146 AL------DKRFGTVVI 156 (299)
T ss_dssp CC------SCCEEEEEE
T ss_pred Cc------CCCcCEEEE
Confidence 31 125787774
No 207
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.24 E-value=0.077 Score=54.21 Aligned_cols=70 Identities=11% Similarity=0.037 Sum_probs=54.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccCh-hcHHHHHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCF-TELDIILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~-~~~~~~l~~~~~~~~d~ 479 (896)
++..++|.-.|.|-=+..+++.. |.++|+|+|+|+.|++.|++. ..+|+++++++- +.++. . .++|.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~---~---~~~D~ 87 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE---T---DQVSV 87 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---G---GCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---C---cCCCE
Confidence 37899999999999999999874 678999999999999999763 357899988874 44321 0 14787
Q ss_pred EEE
Q psy2376 480 ILF 482 (896)
Q Consensus 480 il~ 482 (896)
|+.
T Consensus 88 Ivi 90 (225)
T 3kr9_A 88 ITI 90 (225)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 208
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.16 E-value=0.083 Score=54.11 Aligned_cols=56 Identities=11% Similarity=-0.135 Sum_probs=48.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccCh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCF 462 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~ 462 (896)
+++.++|.-.|.|-=+..+++.. +..+|+|.|+|+.|++.|++. ..+|+++++++-
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~ 81 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANG 81 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred CCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECch
Confidence 37899999999999999998874 677999999999999999763 357899998874
No 209
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.12 E-value=0.097 Score=51.22 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=54.6
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++..++|.-+|.|..+..++++ ..+++|+|.++++++.+++.. .++++++.+..+++ ..-.++|.|+.+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~d~~~~~-----~~~~~~D~i~~~ 114 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-PEARWVVGDLSVDQ-----ISETDFDLIVSA 114 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-TTSEEEECCTTTSC-----CCCCCEEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-CCCcEEEcccccCC-----CCCCceeEEEEC
Confidence 4789999999999999999987 358999999999999998754 45888888876542 112358888865
No 210
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.07 E-value=0.094 Score=57.46 Aligned_cols=71 Identities=20% Similarity=0.258 Sum_probs=57.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|.-+|.|..+..++++ +..+|+|+|.++ +++.|++. ..+++++++++..+++ ...+++|.|
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~I 137 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE-----LPVEKVDII 137 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-----CSSSCEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc-----CCCCceEEE
Confidence 4889999999999999999997 356999999995 88877653 3567999999987762 222479999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.+.
T Consensus 138 is~~ 141 (349)
T 3q7e_A 138 ISEW 141 (349)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9875
No 211
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=94.04 E-value=0.098 Score=54.18 Aligned_cols=71 Identities=14% Similarity=0.288 Sum_probs=57.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
++..++|.-+|.|..+..++++ ..+++|+|.++++++.+++.. ..++++++++..+++ ..-.++|.|+.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~ 110 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-----LPDESVHGVIV 110 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-----SCTTCEEEEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-----CCCCCeeEEEE
Confidence 4789999999999999999986 368999999999999997653 467999999887653 11236898887
Q ss_pred ec
Q psy2376 483 DL 484 (896)
Q Consensus 483 dl 484 (896)
..
T Consensus 111 ~~ 112 (263)
T 2yqz_A 111 VH 112 (263)
T ss_dssp ES
T ss_pred CC
Confidence 53
No 212
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.02 E-value=0.093 Score=54.80 Aligned_cols=70 Identities=13% Similarity=0.155 Sum_probs=56.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-.|.|..+..++++. +..+++|+|.++++++.+++.. .++.++..+..+++ ..-.++|.|+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~d~~~~~-----~~~~~fD~v~~ 154 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-PQVTFCVASSHRLP-----FSDTSMDAIIR 154 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-TTSEEEECCTTSCS-----BCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-CCcEEEEcchhhCC-----CCCCceeEEEE
Confidence 47899999999999999999987 4579999999999999997753 56788888876643 11136888885
No 213
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=94.00 E-value=0.06 Score=59.67 Aligned_cols=72 Identities=15% Similarity=0.071 Sum_probs=54.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---c---------------C-CCeEEEccChhcHHH
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---T---------------D-SRFSIIHNCFTELDI 467 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~---------------~-~~~~~~~~~~~~~~~ 467 (896)
+..++|+..|.|.-+..++++.+ ..+|+++|+|++|++.+++. . + +++++++++-.++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 67899999999999999999974 46899999999999998753 2 1 237788777655432
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
.. ..++|.|+.|
T Consensus 127 ---~~-~~~fD~I~lD 138 (378)
T 2dul_A 127 ---ER-HRYFHFIDLD 138 (378)
T ss_dssp ---HS-TTCEEEEEEC
T ss_pred ---hc-cCCCCEEEeC
Confidence 22 1258888876
No 214
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=93.99 E-value=0.044 Score=58.55 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=56.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---------CCCeEEEccChhcHHHHHHhcCCCcc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---------DSRFSIIHNCFTELDIILKKYNIKKI 477 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~ 477 (896)
.+.++|.-.|.|+-+..++++. +..+|.++|+|+++++.|++.+ +.|++++.++-.+. +++. -.++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~-~~~f 158 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VNQT-SQTF 158 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------CC-CCCE
T ss_pred CCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH---Hhhc-CCCc
Confidence 5789999999999999999874 5679999999999999997631 35899998875443 2221 2369
Q ss_pred cEEEEec
Q psy2376 478 DGILFDL 484 (896)
Q Consensus 478 d~il~dl 484 (896)
|.|+.|+
T Consensus 159 DvIi~D~ 165 (294)
T 3adn_A 159 DVIISDC 165 (294)
T ss_dssp EEEEECC
T ss_pred cEEEECC
Confidence 9999975
No 215
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=93.97 E-value=0.12 Score=51.35 Aligned_cols=68 Identities=12% Similarity=0.269 Sum_probs=53.5
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+ .++|.-+|.|..+..++++ ..+++|+|.++++++.+++.. ..++++++.+..+++ ..-.++|.|+..
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~~ 101 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-----IVADAWEGIVSI 101 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS-----CCTTTCSEEEEE
T ss_pred C-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC-----CCcCCccEEEEE
Confidence 6 9999999999999999886 359999999999999997652 347889988876653 112368888853
No 216
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=93.91 E-value=0.12 Score=52.77 Aligned_cols=69 Identities=13% Similarity=0.180 Sum_probs=55.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..++++ .+++|+|.++++++.+++.. ..++++++.+..+++ .. .++|.|+.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-----LP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-----CS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-----CC-CCcCEEEE
Confidence 3689999999999999999886 58999999999999997642 357889988876653 11 36888886
Q ss_pred ec
Q psy2376 483 DL 484 (896)
Q Consensus 483 dl 484 (896)
+.
T Consensus 103 ~~ 104 (243)
T 3d2l_A 103 LC 104 (243)
T ss_dssp CT
T ss_pred eC
Confidence 53
No 217
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.90 E-value=0.14 Score=54.04 Aligned_cols=72 Identities=15% Similarity=0.038 Sum_probs=55.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|.-+|.|.++..+++. +.++++|+|.++++++.+++.. .+++++++.+..+++- ..-.++|.|
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~~fD~v 137 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----DLGKEFDVI 137 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----CCSSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccccc----CCCCCcCEE
Confidence 4789999999999999998776 3469999999999999997642 2468999888766520 012368888
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.+
T Consensus 138 ~~~ 140 (298)
T 1ri5_A 138 SSQ 140 (298)
T ss_dssp EEE
T ss_pred EEC
Confidence 877
No 218
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=93.86 E-value=0.017 Score=59.92 Aligned_cols=71 Identities=20% Similarity=0.326 Sum_probs=57.4
Q ss_pred cchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccChhcHH
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELD 466 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~~~~~~ 466 (896)
...+.+++.+... +++.++|.-+|.|..|..++++. ++|+|+|+|+++++.+++.. .++++++++++.+++
T Consensus 16 ~~~~~i~~~~~~~---~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~ 88 (245)
T 1yub_A 16 KVLNQIIKQLNLK---ETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ 88 (245)
T ss_dssp TTHHHHHHHCCCC---SSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT
T ss_pred HHHHHHHHhcCCC---CCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC
Confidence 3556777777664 48899999999999999999984 68999999999999887653 357888888886553
No 219
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.80 E-value=0.057 Score=64.66 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=60.2
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc----------CCCeEEEccCh
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----------DSRFSIIHNCF 462 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~----------~~~~~~~~~~~ 462 (896)
+.+++.+... +++.++|.-+|.|..+..++++.++..+|+|+|+++.+++.|+++. ..++++++++.
T Consensus 711 e~LLelL~~~---~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 711 EYALKHIRES---SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHS---CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHhccc---CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 3344444443 4789999999999999999998766679999999999999997621 14678888877
Q ss_pred hcHHHHHHhcCCCcccEEEE
Q psy2376 463 TELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 463 ~~~~~~l~~~~~~~~d~il~ 482 (896)
.+++. ...++|.|+.
T Consensus 788 ~dLp~-----~d~sFDlVV~ 802 (950)
T 3htx_A 788 LEFDS-----RLHDVDIGTC 802 (950)
T ss_dssp TSCCT-----TSCSCCEEEE
T ss_pred HhCCc-----ccCCeeEEEE
Confidence 66432 1125677766
No 220
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.74 E-value=0.11 Score=51.45 Aligned_cols=68 Identities=19% Similarity=0.311 Sum_probs=56.3
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.++|.-+|.|..+..++++ ..+++|+|.++++++.+++. ..+++++++++.+++ ..-.++|.|+..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~d~~~~~-----~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-HPSVTFHHGTITDLS-----DSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-CTTSEEECCCGGGGG-----GSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-CCCCeEEeCcccccc-----cCCCCeEEEEeh
Confidence 788999999999999999997 34899999999999999876 357999999988764 112368999875
No 221
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=93.71 E-value=0.11 Score=53.65 Aligned_cols=56 Identities=11% Similarity=-0.027 Sum_probs=48.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccCh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCF 462 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~ 462 (896)
+++.++|.-.|.|-=+..+++.. +..+|+|+|+|+.|++.|++. ..+|+++++++-
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~ 81 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG 81 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred CCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch
Confidence 37899999999999999998874 677999999999999999763 357899998873
No 222
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=93.56 E-value=0.069 Score=59.35 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=54.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC-------------------------------------CCcEEEEEeCCHHHHHHhh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG-------------------------------------KKGRLIAIDKDTESVSLGN 448 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~-------------------------------------~~~~~~~~D~d~~a~~~~~ 448 (896)
++..++|..+|.|+-+...+.... +..+|+|+|+|+++++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 478999999999999888876631 2258999999999999997
Q ss_pred cc-----cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 449 KI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 449 ~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+. ..+++++.+.++.++.. -.++|.|+.|
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~l~~------~~~~D~Iv~N 308 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQFKS------EDEFGFIITN 308 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGGCCC------SCBSCEEEEC
T ss_pred HHHHHcCCCCceEEEECChhhcCc------CCCCcEEEEC
Confidence 63 24578999998876531 1256777765
No 223
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=93.51 E-value=0.1 Score=55.19 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=56.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKI 477 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~ 477 (896)
++..++|.-+|.|.++..++++ ..+|+|+|+++++++.+++.. ..++.+..++..++++-+ ..-.++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~f 131 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV--PAGDGF 131 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS--CCTTCE
T ss_pred CCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc--ccCCCe
Confidence 4789999999999999999997 248999999999999986531 256888999988876433 222368
Q ss_pred cEEEE
Q psy2376 478 DGILF 482 (896)
Q Consensus 478 d~il~ 482 (896)
|.|+.
T Consensus 132 D~V~~ 136 (293)
T 3thr_A 132 DAVIC 136 (293)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98886
No 224
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=93.44 E-value=0.19 Score=54.78 Aligned_cols=71 Identities=17% Similarity=0.307 Sum_probs=55.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|.-+|.|..+..++++ + ..+|+|+|.++ +++.+++. ..+++++++++..+++ ...+++|.|
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~I 135 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-----LPVEKVDVI 135 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----CSCSCEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-----CCCCcEEEE
Confidence 4789999999999999999987 3 46999999997 88888754 2378999999887652 222368999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.+.
T Consensus 136 vs~~ 139 (340)
T 2fyt_A 136 ISEW 139 (340)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8764
No 225
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.43 E-value=0.11 Score=56.60 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=60.6
Q ss_pred HHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHH
Q psy2376 394 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDII 468 (896)
Q Consensus 394 e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~ 468 (896)
++++.+...+ .+..++|.-.|.|..+..+++++ |+.+++++|. +++++.+++. ..+|++++..++.+....
T Consensus 169 ~~l~~~~~~~--~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 244 (352)
T 3mcz_A 169 DVVSELGVFA--RARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF 244 (352)
T ss_dssp HHHHTCGGGT--TCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG
T ss_pred HHHHhCCCcC--CCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc
Confidence 4555554321 26899999999999999999998 5689999999 8898888753 246899999998765321
Q ss_pred HHhcCCCcccEEEE
Q psy2376 469 LKKYNIKKIDGILF 482 (896)
Q Consensus 469 l~~~~~~~~d~il~ 482 (896)
.. +++|.|+.
T Consensus 245 ~~----~~~D~v~~ 254 (352)
T 3mcz_A 245 EG----GAADVVML 254 (352)
T ss_dssp TT----CCEEEEEE
T ss_pred CC----CCccEEEE
Confidence 11 24788887
No 226
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=93.41 E-value=0.045 Score=57.59 Aligned_cols=68 Identities=21% Similarity=0.313 Sum_probs=49.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc------cCCCeEEE--ccChhcHHHHHHhcCCCcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI------TDSRFSII--HNCFTELDIILKKYNIKKI 477 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~------~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 477 (896)
+++.++|.-+|.|+.|..++++ ++|+|+|+++.+ ..+++. .+.+++++ ++++.+++ -.++
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m~-~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-------~~~f 141 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTLG-VGGHEVPRITESYGWNIVKFKSRVDIHTLP-------VERT 141 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECCC-CSSCCCCCCCCBTTGGGEEEECSCCTTTSC-------CCCC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchhh-hhhhhhhhhhhccCCCeEEEecccCHhHCC-------CCCC
Confidence 5889999999999999999987 579999999942 222211 11267888 77877643 1268
Q ss_pred cEEEEecc
Q psy2376 478 DGILFDLG 485 (896)
Q Consensus 478 d~il~dlG 485 (896)
|.|+.|.+
T Consensus 142 D~V~sd~~ 149 (265)
T 2oxt_A 142 DVIMCDVG 149 (265)
T ss_dssp SEEEECCC
T ss_pred cEEEEeCc
Confidence 99988864
No 227
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=93.38 E-value=0.094 Score=54.98 Aligned_cols=66 Identities=9% Similarity=-0.090 Sum_probs=54.4
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------CCCeEEEccChhcHHHHHHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------DSRFSIIHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~d 478 (896)
++.++|.-.|.|+-+..++++ + .+|.++|+|+++++.|++.+ ++|++++.++-.+.. .++|
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--------~~fD 141 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--------KKYD 141 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--------CCEE
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--------hhCC
Confidence 468999999999999999998 4 79999999999999997642 358999887654322 3699
Q ss_pred EEEEe
Q psy2376 479 GILFD 483 (896)
Q Consensus 479 ~il~d 483 (896)
.|+.|
T Consensus 142 ~Ii~d 146 (262)
T 2cmg_A 142 LIFCL 146 (262)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99988
No 228
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=93.37 E-value=0.11 Score=52.90 Aligned_cols=68 Identities=13% Similarity=0.128 Sum_probs=53.6
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
++.++|.-+|.|..+..+++ +..+|+|+|+++.+++.+++.. .+++++++.++.++. . -.++|.|+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~--~~~fD~v~ 137 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR----P--TELFDLIF 137 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC----C--SSCEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC----C--CCCeeEEE
Confidence 46999999999999998876 4579999999999999998653 256999999987643 1 12578777
Q ss_pred Ee
Q psy2376 482 FD 483 (896)
Q Consensus 482 ~d 483 (896)
..
T Consensus 138 ~~ 139 (235)
T 3lcc_A 138 DY 139 (235)
T ss_dssp EE
T ss_pred EC
Confidence 53
No 229
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=93.31 E-value=0.091 Score=53.70 Aligned_cols=70 Identities=20% Similarity=0.216 Sum_probs=55.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
++..++|.-+|.|.++..++++ ..+++|+|.++++++.+++.. ..++++++.+..+++ .. .++|.|+.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~-~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----IN-RKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----CS-CCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC-----cc-CCceEEEE
Confidence 4789999999999999999987 258999999999999997642 237899998886653 11 36888887
Q ss_pred ec
Q psy2376 483 DL 484 (896)
Q Consensus 483 dl 484 (896)
+.
T Consensus 108 ~~ 109 (246)
T 1y8c_A 108 CL 109 (246)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 230
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=93.30 E-value=0.11 Score=52.85 Aligned_cols=67 Identities=10% Similarity=0.220 Sum_probs=54.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..++++.+ +++|+|.++++++.+++.. .++++++.++.+++. -.++|.|+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~-~~~~~~~~d~~~~~~------~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL-PDATLHQGDMRDFRL------GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC-TTCEEEECCTTTCCC------SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC-CCCEEEECCHHHccc------CCCCcEEEE
Confidence 478999999999999999999863 8999999999999998754 468888888766531 125788774
No 231
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=93.25 E-value=0.056 Score=57.19 Aligned_cols=68 Identities=18% Similarity=0.249 Sum_probs=50.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc------cCCCeEEE--ccChhcHHHHHHhcCCCcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI------TDSRFSII--HNCFTELDIILKKYNIKKI 477 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~------~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 477 (896)
+++.++|.-+|.|+.|..++++ ++|+|+|+++.+ ..+++. .+.+++++ +++..+++ -.++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m~-~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-------~~~f 149 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTLG-TSGHEKPRLVETFGWNLITFKSKVDVTKME-------PFQA 149 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECCC-CTTSCCCCCCCCTTGGGEEEECSCCGGGCC-------CCCC
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECchhh-hhhhhchhhhhhcCCCeEEEeccCcHhhCC-------CCCc
Confidence 5889999999999999999987 579999999942 233221 11268888 77876643 1368
Q ss_pred cEEEEecc
Q psy2376 478 DGILFDLG 485 (896)
Q Consensus 478 d~il~dlG 485 (896)
|.|+.|.+
T Consensus 150 D~Vvsd~~ 157 (276)
T 2wa2_A 150 DTVLCDIG 157 (276)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99988764
No 232
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.14 E-value=0.15 Score=61.17 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=56.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cC-CCeEEEccChhcHHHHHHhcCCCcccE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TD-SRFSIIHNCFTELDIILKKYNIKKIDG 479 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~-~~~~~~~~~~~~~~~~l~~~~~~~~d~ 479 (896)
+++.++|+..|.|+-|..+++. ...+|+++|+++.+++.+++. .+ +++++++++..+. ++..+ .++|.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~---l~~~~-~~fD~ 612 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREAN-EQFDL 612 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH---HHHCC-CCEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH---HHhcC-CCccE
Confidence 4789999999999999999984 235899999999999999763 23 5899998886543 33322 36999
Q ss_pred EEEec
Q psy2376 480 ILFDL 484 (896)
Q Consensus 480 il~dl 484 (896)
|+.|-
T Consensus 613 Ii~DP 617 (703)
T 3v97_A 613 IFIDP 617 (703)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99763
No 233
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.12 E-value=0.22 Score=54.51 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=60.1
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELD 466 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~ 466 (896)
.+++++.+... +++.++|.-.|.|..+..++++. |+.+++++|+ +.+++.+++. ..+|++++..++.+.+
T Consensus 179 ~~~l~~~~~~~---~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 253 (359)
T 1x19_A 179 IQLLLEEAKLD---GVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES 253 (359)
T ss_dssp HHHHHHHCCCT---TCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC
T ss_pred HHHHHHhcCCC---CCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC
Confidence 35566655443 47899999999999999999998 5789999999 9999998764 3567999988876531
Q ss_pred HHHHhcCCCcccEEEE
Q psy2376 467 IILKKYNIKKIDGILF 482 (896)
Q Consensus 467 ~~l~~~~~~~~d~il~ 482 (896)
.+..|.|++
T Consensus 254 -------~~~~D~v~~ 262 (359)
T 1x19_A 254 -------YPEADAVLF 262 (359)
T ss_dssp -------CCCCSEEEE
T ss_pred -------CCCCCEEEE
Confidence 122377776
No 234
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=93.02 E-value=0.074 Score=57.03 Aligned_cols=43 Identities=23% Similarity=0.340 Sum_probs=37.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
++..++|.-+|.|+++..+++. ...+|+|+|+++++++.|+++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~ 90 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNER 90 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHH
Confidence 4789999999999999987774 246899999999999999865
No 235
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.02 E-value=0.18 Score=55.84 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=57.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|.-+|.|..+..++++ + ..+|+|+|.+ ++++.+++. ..+++++++++..++. .. +++|.|
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-~~~D~I 133 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS-----LP-EKVDVI 133 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-----CS-SCEEEE
T ss_pred CCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC-----cC-CcceEE
Confidence 5889999999999999999997 3 3599999999 888888764 3577999999987764 11 479999
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+.|.
T Consensus 134 v~~~ 137 (376)
T 3r0q_C 134 ISEW 137 (376)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9865
No 236
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=92.80 E-value=0.21 Score=55.41 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=55.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..++++ ..+|+|+|+|+.+++.+++.. .-++++++++..+... + -.++|.|+.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~---~--~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALT---E--EARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSC---T--TCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccc---c--CCCeEEEEE
Confidence 4789999999999999999997 359999999999999998642 2247888888765421 1 136899998
Q ss_pred e
Q psy2376 483 D 483 (896)
Q Consensus 483 d 483 (896)
|
T Consensus 305 n 305 (381)
T 3dmg_A 305 N 305 (381)
T ss_dssp C
T ss_pred C
Confidence 6
No 237
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=92.69 E-value=0.22 Score=50.96 Aligned_cols=68 Identities=19% Similarity=0.232 Sum_probs=53.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..+.++ +.+|+|+|.++++++.+++. +++++.+..+. +....-.++|.|+..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~----~~~~~~d~~~~---~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK----FNVVKSDAIEY---LKSLPDKYLDGVMIS 108 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT----SEEECSCHHHH---HHTSCTTCBSEEEEE
T ss_pred CCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh----cceeeccHHHH---hhhcCCCCeeEEEEC
Confidence 4789999999999999999887 34799999999999999764 77777776543 222323468999875
No 238
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=92.35 E-value=0.11 Score=56.70 Aligned_cols=69 Identities=17% Similarity=0.122 Sum_probs=52.5
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.++|.-+|.|..+..++++. |+.+|+|+|+++.+++.+++.. +-+.++++++..+.. -+++|.|+.|
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-------~~~fD~Iv~~ 268 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-------KGRFDMIISN 268 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-------CSCEEEEEEC
T ss_pred CCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-------cCCeeEEEEC
Confidence 6789999999999999999986 5679999999999999997642 223556666653321 1258888876
No 239
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=92.34 E-value=0.27 Score=54.04 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=55.3
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhc
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTE 464 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~ 464 (896)
..+++++.+... ++..++|.-+|.|..+..++++. |+.+++++|+ +++++.+++. ..+|+++++.++.+
T Consensus 170 ~~~~~~~~~~~~---~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 170 AYEAPADAYDWS---AVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK 243 (374)
T ss_dssp TTHHHHHTSCCT---TCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHhCCCC---CCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 345666665543 47899999999999999999998 5789999999 9999998764 23589999988743
No 240
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=92.34 E-value=0.092 Score=59.16 Aligned_cols=68 Identities=13% Similarity=0.146 Sum_probs=53.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc---CCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+++.++|.-+|.|..+..++++ ..+|+|+|.+++|++.|++.. +-.+++++++..++. .+ ++|.|+.
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~---~~----~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS---VK----GFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC---CT----TCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcC---cc----CCCEEEE
Confidence 3789999999999999999886 358999999999999997642 111889998876642 11 5899987
Q ss_pred e
Q psy2376 483 D 483 (896)
Q Consensus 483 d 483 (896)
|
T Consensus 360 d 360 (425)
T 2jjq_A 360 D 360 (425)
T ss_dssp C
T ss_pred c
Confidence 4
No 241
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=92.33 E-value=0.24 Score=49.41 Aligned_cols=67 Identities=9% Similarity=0.141 Sum_probs=52.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+++.++|.-+|.|..+..+ + ..+++|+|.++++++.+++.. .++++++.+..+++ ..-.++|.|+.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~d~~~~~-----~~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA-PEATWVRAWGEALP-----FPGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC-TTSEEECCCTTSCC-----SCSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC-CCcEEEEcccccCC-----CCCCcEEEEEEc
Confidence 3789999999999998877 2 238999999999999998754 67888888877653 112368888854
No 242
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=92.22 E-value=0.35 Score=53.50 Aligned_cols=70 Identities=17% Similarity=0.327 Sum_probs=54.6
Q ss_pred CcEEEEEccC------CChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHH--HH-hcCCCcc
Q psy2376 407 NGIYIDATFG------QGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII--LK-KYNIKKI 477 (896)
Q Consensus 407 ~~~~vD~T~G------~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~--l~-~~~~~~~ 477 (896)
+..++|.-+| .||.|..+++++.|+++|+|+|+++++. ...+|+++++++..+++-. +. .. .++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-----~~~~rI~fv~GDa~dlpf~~~l~~~d--~sF 289 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-----VDELRIRTIQGDQNDAEFLDRIARRY--GPF 289 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-----GCBTTEEEEECCTTCHHHHHHHHHHH--CCE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-----hcCCCcEEEEecccccchhhhhhccc--CCc
Confidence 6799999999 6889999999876789999999999873 1247899999998886422 22 12 268
Q ss_pred cEEEEe
Q psy2376 478 DGILFD 483 (896)
Q Consensus 478 d~il~d 483 (896)
|.|+.|
T Consensus 290 DlVisd 295 (419)
T 3sso_A 290 DIVIDD 295 (419)
T ss_dssp EEEEEC
T ss_pred cEEEEC
Confidence 999866
No 243
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=92.10 E-value=0.34 Score=52.89 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=57.9
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDI 467 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~ 467 (896)
+.+++.+... +++.++|.-+|.|..+..++++ +.++|+|+|.++ .++.+++. ..+++++++++..+++
T Consensus 40 ~~i~~~l~~~---~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 112 (348)
T 2y1w_A 40 RAILQNHTDF---KDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS- 112 (348)
T ss_dssp HHHHHTGGGT---TTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-
T ss_pred HHHHhccccC---CcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-
Confidence 3444445443 4789999999999999999886 346999999997 45666653 2478999999987652
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
.. +++|.|+.+
T Consensus 113 ----~~-~~~D~Ivs~ 123 (348)
T 2y1w_A 113 ----LP-EQVDIIISE 123 (348)
T ss_dssp ----CS-SCEEEEEEC
T ss_pred ----CC-CceeEEEEe
Confidence 11 368888875
No 244
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=92.05 E-value=0.16 Score=56.62 Aligned_cols=72 Identities=8% Similarity=0.068 Sum_probs=54.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC-------------------------------------CCcEEEEEeCCHHHHHHhh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG-------------------------------------KKGRLIAIDKDTESVSLGN 448 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~-------------------------------------~~~~~~~~D~d~~a~~~~~ 448 (896)
++..++|..+|.|.-....+.... +..+|+|+|+|+.+++.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 478999999999998877766532 1257999999999999997
Q ss_pred cc-----cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 449 KI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 449 ~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+. ..+++++++.++.++.. . .++|.|+.|
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~----~--~~fD~Iv~N 314 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQT----E--DEYGVVVAN 314 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCC----C--CCSCEEEEC
T ss_pred HHHHHcCCCCceEEEECChHhCCC----C--CCCCEEEEC
Confidence 63 34678999988866531 1 257777766
No 245
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=92.01 E-value=0.3 Score=52.82 Aligned_cols=70 Identities=16% Similarity=0.326 Sum_probs=54.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+++.++|.-+|.|..+..++++ + ..+|+|+|.+ .+++.+++. ..+++++++++..+++ ...+++|.|
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~I 109 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH-----LPFPKVDII 109 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC-----CSSSCEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc-----CCCCcccEE
Confidence 4789999999999999998886 3 4699999999 477777653 3478999999887653 122368999
Q ss_pred EEe
Q psy2376 481 LFD 483 (896)
Q Consensus 481 l~d 483 (896)
+.+
T Consensus 110 vs~ 112 (328)
T 1g6q_1 110 ISE 112 (328)
T ss_dssp EEC
T ss_pred EEe
Confidence 865
No 246
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=91.89 E-value=0.18 Score=55.87 Aligned_cols=72 Identities=13% Similarity=0.098 Sum_probs=54.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC-------------------------------------CCcEEEEEeCCHHHHHHhh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG-------------------------------------KKGRLIAIDKDTESVSLGN 448 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~-------------------------------------~~~~~~~~D~d~~a~~~~~ 448 (896)
++..++|..+|.|.-....+.... +..+++|+|+|++|++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 478999999999998877765532 1257999999999999997
Q ss_pred cc-----cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 449 KI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 449 ~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+. ..+++++++.++.++.. . .++|.|+.|
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~----~--~~fD~Iv~N 307 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKT----N--KINGVLISN 307 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCC----C--CCSCEEEEC
T ss_pred HHHHHcCCCCceEEEECChHHCCc----c--CCcCEEEEC
Confidence 63 34679999998876531 1 257777765
No 247
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=91.83 E-value=0.19 Score=50.65 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=48.2
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChh
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFT 463 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~ 463 (896)
..+++++.+. . ++..++|.-+|.|..+..++++ + .+++|+|.++++++.+++.. .++++.+..
T Consensus 21 ~~~~l~~~~~-~---~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~---~~~~~~d~~ 83 (230)
T 3cc8_A 21 VNPNLLKHIK-K---EWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL---DHVVLGDIE 83 (230)
T ss_dssp CCHHHHTTCC-T---TCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS---SEEEESCTT
T ss_pred HHHHHHHHhc-c---CCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC---CcEEEcchh
Confidence 4456666665 2 4789999999999999999988 3 69999999999999987642 144555543
No 248
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=91.79 E-value=0.42 Score=52.54 Aligned_cols=66 Identities=12% Similarity=0.153 Sum_probs=53.0
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChh
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFT 463 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~ 463 (896)
.++++.+... ++..++|.-.|.|..+..+++++ |+.+++++|+ |++++.+++. ..+|++++..++.
T Consensus 192 ~~l~~~~~~~---~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~ 262 (369)
T 3gwz_A 192 GQVAAAYDFS---GAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF 262 (369)
T ss_dssp HHHHHHSCCT---TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHhCCCc---cCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC
Confidence 4445544432 47899999999999999999997 5789999999 9999998764 2478999888874
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=91.41 E-value=0.099 Score=56.12 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=50.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeC----CHHHHHHhh-c-ccCCCeEEEcc-ChhcHHHHHHhcCCCccc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDK----DTESVSLGN-K-ITDSRFSIIHN-CFTELDIILKKYNIKKID 478 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~----d~~a~~~~~-~-~~~~~~~~~~~-~~~~~~~~l~~~~~~~~d 478 (896)
++..++|.-+|.|+.|..++++ ++|+|+|. .+..++..+ + ...++++++++ +..+++ ..++|
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~-------~~~fD 150 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP-------PERCD 150 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC-------CCCCS
T ss_pred CCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC-------cCCCC
Confidence 5889999999999999999987 47999999 443222211 1 11256888888 665442 13689
Q ss_pred EEEEecccC
Q psy2376 479 GILFDLGIS 487 (896)
Q Consensus 479 ~il~dlG~s 487 (896)
.|+-|.+.+
T Consensus 151 ~V~sd~~~~ 159 (305)
T 2p41_A 151 TLLCDIGES 159 (305)
T ss_dssp EEEECCCCC
T ss_pred EEEECCccc
Confidence 999998765
No 250
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.24 E-value=0.43 Score=51.50 Aligned_cols=55 Identities=18% Similarity=0.215 Sum_probs=47.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccCh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCF 462 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~ 462 (896)
+...++|.-.|.|..+..+++++ |+.+++++|+ |++++.+++. ..+|++++..++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~ 228 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSF 228 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCC
Confidence 36899999999999999999998 5689999999 9999998764 246788888776
No 251
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=91.19 E-value=0.3 Score=52.73 Aligned_cols=69 Identities=16% Similarity=0.238 Sum_probs=54.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
++..++|.-.|.|..+..+++++ |+.+++++|++ .+++.+++. ..+|+++++.++.+.+ .. .++|.|
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-~~~D~v 236 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-----YG-NDYDLV 236 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-----CC-SCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-----CC-CCCcEE
Confidence 37899999999999999999998 56799999999 999998764 2467999988875431 11 137777
Q ss_pred EE
Q psy2376 481 LF 482 (896)
Q Consensus 481 l~ 482 (896)
+.
T Consensus 237 ~~ 238 (335)
T 2r3s_A 237 LL 238 (335)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 252
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=91.15 E-value=0.62 Score=50.79 Aligned_cols=74 Identities=18% Similarity=0.207 Sum_probs=56.3
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--------C----CCeEEEccChhc-HHHHHHhcC
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--------D----SRFSIIHNCFTE-LDIILKKYN 473 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--------~----~~~~~~~~~~~~-~~~~l~~~~ 473 (896)
.+.++|.-.|.|+-+..++++. + .+|.++|+|+++++.+++.+ + +|+++++++-.+ +.+..+..
T Consensus 189 pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~- 265 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG- 265 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT-
T ss_pred CCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC-
Confidence 5789999999999999999874 4 79999999999999998642 1 278888776433 33322122
Q ss_pred CCcccEEEEec
Q psy2376 474 IKKIDGILFDL 484 (896)
Q Consensus 474 ~~~~d~il~dl 484 (896)
.++|.|+.|.
T Consensus 266 -~~fDvII~D~ 275 (364)
T 2qfm_A 266 -REFDYVINDL 275 (364)
T ss_dssp -CCEEEEEEEC
T ss_pred -CCceEEEECC
Confidence 3699999995
No 253
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=91.04 E-value=0.51 Score=51.79 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=47.5
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc-----CCCeEEEccChhc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT-----DSRFSIIHNCFTE 464 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~-----~~~~~~~~~~~~~ 464 (896)
.+.++|.-.|.|..+..+++++ |+.+++++|. |++++.+++.. .+|++++..++.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLD 240 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCS
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccc
Confidence 6799999999999999999998 5689999999 99999987642 3578888887743
No 254
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.02 E-value=0.35 Score=50.16 Aligned_cols=53 Identities=15% Similarity=0.150 Sum_probs=42.6
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 464 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~ 464 (896)
++.++|.-+|.|..+..++++ ..+++|+|.++++++.+++...++ +++.+..+
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~--~~~~d~~~ 107 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVKN--VVEAKAED 107 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCSC--EEECCTTS
T ss_pred CCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcCCC--EEECcHHH
Confidence 789999999999999999986 358999999999999997753322 55555544
No 255
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=90.89 E-value=0.46 Score=54.28 Aligned_cols=79 Identities=16% Similarity=0.188 Sum_probs=57.6
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDI 467 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~ 467 (896)
+++++.+... +++.++|.-.|.|..+..++++ +..+|+|+|.++ +++.|++. ..+|+++++++..+++
T Consensus 148 ~~il~~l~~~---~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~- 220 (480)
T 3b3j_A 148 RAILQNHTDF---KDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS- 220 (480)
T ss_dssp HHHHHTGGGT---TTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-
T ss_pred HHHHHhhhhc---CCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-
Confidence 3344444433 4789999999999999988874 456999999998 77777653 3478999999987642
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
+. +++|.|+.+
T Consensus 221 -~~----~~fD~Ivs~ 231 (480)
T 3b3j_A 221 -LP----EQVDIIISE 231 (480)
T ss_dssp -CS----SCEEEEECC
T ss_pred -cC----CCeEEEEEe
Confidence 11 257887764
No 256
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=90.77 E-value=0.42 Score=52.18 Aligned_cols=68 Identities=13% Similarity=0.176 Sum_probs=54.0
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChh
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFT 463 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~ 463 (896)
..+++++.+... ++..++|.-.|.|..+..++++. |+.+++++|+ +++++.+++. ..+|+++++.++.
T Consensus 171 ~~~~l~~~~~~~---~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 243 (360)
T 1tw3_A 171 AFDAPAAAYDWT---NVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFF 243 (360)
T ss_dssp TTHHHHHHSCCT---TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred hHHHHHHhCCCc---cCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 345556665543 47899999999999999999998 5789999999 9999988764 2357888888864
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=90.27 E-value=0.19 Score=56.91 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=53.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC------------CCcEEEEEeCCHHHHHHhhcc---c--C-CCeEEEccChhcHHH
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG------------KKGRLIAIDKDTESVSLGNKI---T--D-SRFSIIHNCFTELDI 467 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~------------~~~~~~~~D~d~~a~~~~~~~---~--~-~~~~~~~~~~~~~~~ 467 (896)
++..++|.++|.|+....+.+.+. +..+++|+|+|+.+++.|+.. . . ++..+++++.-..+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~- 249 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE- 249 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC-
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc-
Confidence 477999999999999999988752 235799999999999998752 1 1 15777777753321
Q ss_pred HHHhcCCCcccEEEEec
Q psy2376 468 ILKKYNIKKIDGILFDL 484 (896)
Q Consensus 468 ~l~~~~~~~~d~il~dl 484 (896)
...++|.|+.|-
T Consensus 250 -----~~~~fD~Iv~NP 261 (445)
T 2okc_A 250 -----PSTLVDVILANP 261 (445)
T ss_dssp -----CSSCEEEEEECC
T ss_pred -----ccCCcCEEEECC
Confidence 123688888873
No 258
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=90.03 E-value=0.74 Score=47.31 Aligned_cols=127 Identities=11% Similarity=0.002 Sum_probs=83.3
Q ss_pred EEEeecchhHHHHHHHHhhcCCCCCCCCCCCccccCCcccchhhcccccccccccccccccCCceeeecc-CCCcceEEE
Q psy2376 619 VVISFHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEG-RSNINVIVT 697 (896)
Q Consensus 619 ~visfhsledr~vk~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~e~wd~~Gl~~~~-~~~v~~i~~ 697 (896)
=.++-|+-=|.+|.+|+++.-.. + +....++..++++ --.+++......+.. ++-+.+|+ ++.+.|+.+
T Consensus 131 p~m~~H~paD~~~~~~l~~~~~~-----~--~~~~~p~~t~~dv-i~~L~~ipEy~~a~~--~p~I~~g~~~~~vgkIaV 200 (278)
T 3rxy_A 131 PFLNIHLPLDEVGRRIMVKTIQE-----A--VEPLGDEARVQDA-IDALMTLPEFAGAAT--RIMVPVGAVDQPLGKIAV 200 (278)
T ss_dssp CEEECCHHHHHHHHHHHHHHHHH-----H--HGGGGGGCBHHHH-HHHHTTSHHHHSCSS--CCEEEESCTTSBCCSEEE
T ss_pred cceecCcchHHHHHHHHHHHHhh-----h--hhccCccchHHHH-HHHHHhCchhhhcCC--CCEEEeCCCCCcCCEEEE
Confidence 36788999999999999974320 0 0011122345554 233444444443333 77788886 678888887
Q ss_pred Eee----cCHHHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeEEEe-cCCCCCCCCCcHHHHHH
Q psy2376 698 GVT----ASLDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAY-HLPLDMHPKLGNNAQLA 770 (896)
Q Consensus 698 ~~~----~t~~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~~-Ht~lD~~~~~G~n~~la 770 (896)
.-- -..+.+++|.+.|+|++||=|+- .........+++|+++++ |-.=|.. |+|....
T Consensus 201 ~~GgGtsG~~~~i~~a~~~GvDt~ITGe~~------------~~~~~~~A~E~ginVI~AGHyATEt~---Gv~aL~~ 263 (278)
T 3rxy_A 201 VHGAGTNGGYAVARAYFDHGVRTVLYIHIA------------PEEAERLRREGGGNLIVTGHIASDLV---GINRYVQ 263 (278)
T ss_dssp CCSSSSCCHHHHHHHHHHTTCCEEEESCCC------------HHHHHHHHHHCSSEEEECCHHHHHHH---HHHHHHH
T ss_pred EcCCCCCCcHHHHHHHHHcCCCEEEEecCc------------hHHHHHHHHHcCCeEEEeccchHhHH---HHHHHHH
Confidence 766 66789999999999999998843 122336788889999876 5444443 6665543
No 259
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=89.99 E-value=0.96 Score=49.37 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=47.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc----cCCCeEEEccCh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI----TDSRFSIIHNCF 462 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~----~~~~~~~~~~~~ 462 (896)
+.+.++|.-.|.|..+..+++++ |+.+++.+|. |+.++.+++. ..+|++++.++|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~ 237 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDF 237 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCT
T ss_pred cCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCcc
Confidence 36799999999999999999998 5789999997 8888888764 247899988887
No 260
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=89.45 E-value=0.92 Score=47.72 Aligned_cols=43 Identities=19% Similarity=0.124 Sum_probs=36.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeC-CHHHHHHhhcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDK-DTESVSLGNKI 450 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~-d~~a~~~~~~~ 450 (896)
+++.++|.-+|.|..+..+++. + .++|+|+|+ ++++++.+++.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n 122 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESN 122 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHH
Confidence 4789999999999999988775 3 359999999 99999988764
No 261
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=89.42 E-value=0.76 Score=50.49 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=51.2
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChh
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFT 463 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~ 463 (896)
.+++++.+... .++..++|.-.|.|..+..+++++ |+.+++++|. |++++.+++. +|++++.+++.
T Consensus 191 ~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~ 256 (368)
T 3reo_A 191 MKKILEMYNGF--EGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF--SGVEHLGGDMF 256 (368)
T ss_dssp HHHHHTTCCTT--TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC--TTEEEEECCTT
T ss_pred HHHHHHhcccc--cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc--CCCEEEecCCC
Confidence 34555555411 247899999999999999999998 5789999999 9998887653 57777777763
No 262
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=89.29 E-value=0.2 Score=51.81 Aligned_cols=43 Identities=14% Similarity=-0.063 Sum_probs=37.5
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
++..++|.-+|.|.++..+++.. . .+|+|+|.++.+++.+++.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~ 98 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKW 98 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHH
Confidence 47899999999999999888764 2 5899999999999999765
No 263
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=88.99 E-value=0.84 Score=50.06 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=50.8
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChh
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFT 463 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~ 463 (896)
+++++.+... +++..++|.-.|.|..+..+++++ |+.+++++|. |+.++.+++. +|++++..++.
T Consensus 190 ~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~D~~ 254 (364)
T 3p9c_A 190 KKLLELYHGF--EGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF--PGVTHVGGDMF 254 (364)
T ss_dssp HHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC--TTEEEEECCTT
T ss_pred HHHHHhcccc--cCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc--CCeEEEeCCcC
Confidence 4455554411 247899999999999999999998 5789999999 9998887653 67888777764
No 264
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=88.81 E-value=0.53 Score=50.80 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=53.0
Q ss_pred cEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 408 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 408 ~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
..++|.-.|.|..+..++++. |+.+++++|+ +.+++.+++. ..+|++++..++.+ + +. +++|.|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~~----~~~D~v~ 238 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E--VP----SNGDIYL 238 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C--CC----SSCSEEE
T ss_pred CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C--CC----CCCCEEE
Confidence 799999999999999999998 5679999999 9999988764 24789999888754 1 11 2478777
No 265
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=88.44 E-value=0.84 Score=47.78 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=61.4
Q ss_pred cCHHHHHHHHHhHhCC--------CcEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccC--------------
Q psy2376 804 ITIKDLFHHITRKIGK--------KPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI-------------- 861 (896)
Q Consensus 804 ~~~~el~~~~~~~l~~--------~~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~-------------- 861 (896)
|+..|+++.+.+.+.. ..+.+|+++++|+||++|-=...+.+++|.+.|||++||=.-
T Consensus 3 M~~~ei~~~le~~~p~~~a~~~D~~GL~vG~~~~~V~~I~~alD~t~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~ 82 (267)
T 2fyw_A 3 MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRP 82 (267)
T ss_dssp CBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSH
T ss_pred ccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccccCch
Confidence 5778899988887643 134578888999999999999999999999999999998211
Q ss_pred CchHHHHHHHcCCeEEEeCChhh
Q psy2376 862 SESTVYISRESGVAYFAAGHHAT 884 (896)
Q Consensus 862 ~~h~~~~a~~~g~~li~~gH~~s 884 (896)
+..-...+.++|+++... |.+-
T Consensus 83 ~~~~i~~li~~~I~lya~-Ht~l 104 (267)
T 2fyw_A 83 QNQIYIDLIKHDIAVYVS-HTNI 104 (267)
T ss_dssp HHHHHHHHHHTTCEEEEC-SHHH
T ss_pred HHHHHHHHHHCCCeEEEe-eccc
Confidence 111245678899999876 7543
No 266
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=88.20 E-value=0.99 Score=44.63 Aligned_cols=43 Identities=16% Similarity=0.035 Sum_probs=38.4
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
.+.++|.-+|.|-=+..+.... |+.+++|.|+|+.+++.+++.
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~ 92 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSI 92 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHH
Confidence 6789999999999999998886 567999999999999999864
No 267
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=88.05 E-value=1.1 Score=48.54 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=55.6
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhc---ccCCCeEEEccChh-cHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK---ITDSRFSIIHNCFT-ELDI 467 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~---~~~~~~~~~~~~~~-~~~~ 467 (896)
.+++++.+... ++..++|.-+|.|..+..+++++ |+.+++++|. ++.++.++. -..+|++++..++. .++
T Consensus 173 ~~~~~~~~~~~---~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p- 246 (348)
T 3lst_A 173 HLILARAGDFP---ATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVARHRLDAPDVAGRWKVVEGDFLREVP- 246 (348)
T ss_dssp HHHHHHHSCCC---SSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHTTCCCCCGGGTTSEEEEECCTTTCCC-
T ss_pred HHHHHHhCCcc---CCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhhcccccccCCCCCeEEEecCCCCCCC-
Confidence 34555555443 47899999999999999999998 5789999999 555552211 13578999998873 211
Q ss_pred HHHhcCCCcccEEEEe
Q psy2376 468 ILKKYNIKKIDGILFD 483 (896)
Q Consensus 468 ~l~~~~~~~~d~il~d 483 (896)
++|.|++.
T Consensus 247 --------~~D~v~~~ 254 (348)
T 3lst_A 247 --------HADVHVLK 254 (348)
T ss_dssp --------CCSEEEEE
T ss_pred --------CCcEEEEe
Confidence 47877753
No 268
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=87.15 E-value=0.81 Score=49.82 Aligned_cols=53 Identities=17% Similarity=0.116 Sum_probs=44.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccCh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCF 462 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~ 462 (896)
++..++|.-.|.|..+..+++++ |+.+++++|. +.+++.+++. ++++++..++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~ 240 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS--NNLTYVGGDM 240 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB--TTEEEEECCT
T ss_pred cCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC--CCcEEEeccc
Confidence 36799999999999999999998 5689999999 9999888763 3477777666
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=86.95 E-value=0.62 Score=55.87 Aligned_cols=77 Identities=10% Similarity=0.054 Sum_probs=56.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHc-----------------------------------------CCCcEEEEEeCCHHHH
Q psy2376 406 INGIYIDATFGQGGHSCKILERL-----------------------------------------GKKGRLIAIDKDTESV 444 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~-----------------------------------------~~~~~~~~~D~d~~a~ 444 (896)
++..++|-.+|.|.=....+... .++.+++|+|+|+.|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 47899999999999877666542 1235899999999999
Q ss_pred HHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe--cc
Q psy2376 445 SLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD--LG 485 (896)
Q Consensus 445 ~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d--lG 485 (896)
+.|++. .++++++.+.++.++.. .....++|.|+.| .|
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~---~~~~~~~d~Iv~NPPYG 314 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTN---PLPKGPYGTVLSNPPYG 314 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCC---SCTTCCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCcc---ccccCCCCEEEeCCCcc
Confidence 999753 34678999999876531 1111157889888 55
No 270
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=86.32 E-value=0.49 Score=47.96 Aligned_cols=87 Identities=18% Similarity=0.079 Sum_probs=60.5
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhh---cccCCCeEEEcc-ChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN---KITDSRFSIIHN-CFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~---~~~~~~~~~~~~-~~~~~~~~ 468 (896)
+|+.+....+ +++.++|...+-||-|...+.+.+.. +|+|+|+.+.-.+.=+ ..--+-++|... ++..+..
T Consensus 68 ~ei~ek~~l~---~g~~VvDLGaapGGWSq~~a~~~g~~-~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~- 142 (267)
T 3p8z_A 68 QWFVERNMVI---PEGRVIDLGCGRGGWSYYCAGLKKVT-EVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP- 142 (267)
T ss_dssp HHHHHTTSSC---CCEEEEEESCTTSHHHHHHHTSTTEE-EEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC-
T ss_pred HHHHHhcCCC---CCCEEEEcCCCCCcHHHHHHHhcCCC-EEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC-
Confidence 4444444333 48899999999999999888887654 8999999866542110 111356888887 6633322
Q ss_pred HHhcCCCcccEEEEecccCccc
Q psy2376 469 LKKYNIKKIDGILFDLGISSNQ 490 (896)
Q Consensus 469 l~~~~~~~~d~il~dlG~ss~q 490 (896)
.++|-+|-|.|-||.-
T Consensus 143 ------~~~DtllcDIgeSs~~ 158 (267)
T 3p8z_A 143 ------EKCDTLLCDIGESSPS 158 (267)
T ss_dssp ------CCCSEEEECCCCCCSC
T ss_pred ------ccccEEEEecCCCCCC
Confidence 3699999999988753
No 271
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=85.45 E-value=0.6 Score=48.90 Aligned_cols=85 Identities=16% Similarity=0.064 Sum_probs=57.2
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHH---hhcccCCCeEEEcc-ChhcHHHH
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSL---GNKITDSRFSIIHN-CFTELDII 468 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~---~~~~~~~~~~~~~~-~~~~~~~~ 468 (896)
+|+.+....+ +++.++|...+.||-|...+.+.+. .+|+|+|+-..-.+. .+++-.+-+++... |+..+..
T Consensus 84 ~ei~~~~~l~---~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~- 158 (321)
T 3lkz_A 84 RWLVERRFLE---PVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS- 158 (321)
T ss_dssp HHHHHTTSCC---CCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC-
T ss_pred HHHHHhcCCC---CCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC-
Confidence 4444443333 4889999999999999988888755 389999998653211 01111233777776 6655443
Q ss_pred HHhcCCCcccEEEEecccCc
Q psy2376 469 LKKYNIKKIDGILFDLGISS 488 (896)
Q Consensus 469 l~~~~~~~~d~il~dlG~ss 488 (896)
.++|.|+-|+|=||
T Consensus 159 ------~~~D~ivcDigeSs 172 (321)
T 3lkz_A 159 ------ECCDTLLCDIGESS 172 (321)
T ss_dssp ------CCCSEEEECCCCCC
T ss_pred ------CCCCEEEEECccCC
Confidence 36999999999554
No 272
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=85.19 E-value=0.83 Score=50.28 Aligned_cols=70 Identities=16% Similarity=0.261 Sum_probs=52.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----cCCCeEEEccChhcHHHHHHhcCCCcccEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----TDSRFSIIHNCFTELDIILKKYNIKKIDGI 480 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~i 480 (896)
+|++++|.-+|.|--|.+.+++ + ..+|+|+|.++ ..+.|++. +++++++++++-++++ ++ +++|.|
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--lp----e~~Dvi 153 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--LP----EQVDAI 153 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--CS----SCEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--CC----ccccEE
Confidence 4889999999999998776664 3 34899999997 45666653 4688999999887653 11 368888
Q ss_pred EEec
Q psy2376 481 LFDL 484 (896)
Q Consensus 481 l~dl 484 (896)
+-++
T Consensus 154 vsE~ 157 (376)
T 4hc4_A 154 VSEW 157 (376)
T ss_dssp ECCC
T ss_pred Eeec
Confidence 7543
No 273
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=84.81 E-value=1.2 Score=48.87 Aligned_cols=55 Identities=13% Similarity=0.063 Sum_probs=46.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 464 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~ 464 (896)
++..++|.-.|.|..+..++++. |+.+++++|. +.+++.+++. ++++++..++.+
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~~ 263 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL--SGIEHVGGDMFA 263 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC--TTEEEEECCTTT
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc--CCCEEEeCCccc
Confidence 36899999999999999999998 5789999999 9999888763 568888887743
No 274
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=84.73 E-value=1.6 Score=48.49 Aligned_cols=54 Identities=7% Similarity=0.015 Sum_probs=43.8
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
+.+++++.+... ++..++|.-+|.|..+..+.++ ..+++|+|.++.+++.+++.
T Consensus 95 ~~~~l~~~~~~~---~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 95 LARDFLATELTG---PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp HHHHHHHTTTCS---SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT
T ss_pred HHHHHHHHhCCC---CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc
Confidence 345556666553 4889999999999999999986 34899999999999999764
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=84.53 E-value=1.1 Score=52.07 Aligned_cols=74 Identities=12% Similarity=0.026 Sum_probs=52.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCC-----------------CcEEEEEeCCHHHHHHhhcc-----cCC----CeEEEc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGK-----------------KGRLIAIDKDTESVSLGNKI-----TDS----RFSIIH 459 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~-----------------~~~~~~~D~d~~a~~~~~~~-----~~~----~~~~~~ 459 (896)
++..++|.++|.|+-.....+.+.. ...++|+|+|+.+++.|+.. ... +..+++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 4789999999999999888876532 13799999999999998742 122 267777
Q ss_pred cChhcHHHHHHhcCCCcccEEEEe
Q psy2376 460 NCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 460 ~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.-..+. . ...++|.|+.|
T Consensus 249 gDtL~~~~--~--~~~~fD~Vv~N 268 (541)
T 2ar0_A 249 GNTLGSDG--E--NLPKAHIVATN 268 (541)
T ss_dssp SCTTSHHH--H--TSCCEEEEEEC
T ss_pred CCCccccc--c--cccCCeEEEEC
Confidence 76533221 1 12368888877
No 276
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=83.20 E-value=1.1 Score=44.76 Aligned_cols=62 Identities=13% Similarity=0.203 Sum_probs=48.7
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
++.++|.-+|.|..+..++++ +|+|.++++++.+++. ++++++.+..+++ ..-.++|.|+.+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~---~~~~~~~d~~~~~-----~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR---GVFVLKGTAENLP-----LKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT---TCEEEECBTTBCC-----SCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc---CCEEEEcccccCC-----CCCCCeeEEEEc
Confidence 678999999999999888664 8999999999999774 6788888776543 112358888864
No 277
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=82.75 E-value=0.72 Score=48.91 Aligned_cols=61 Identities=21% Similarity=0.121 Sum_probs=46.1
Q ss_pred cCcEEEEEccCC------ChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEE-EccChhcHHHHHHhcCCCccc
Q psy2376 406 INGIYIDATFGQ------GGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSI-IHNCFTELDIILKKYNIKKID 478 (896)
Q Consensus 406 ~~~~~vD~T~G~------Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~d 478 (896)
++..++|.-+|. |+ ..++++.+++++|+|+|++++ + +++++ ++++..+++- ..++|
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v--------~~v~~~i~gD~~~~~~------~~~fD 125 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V--------SDADSTLIGDCATVHT------ANKWD 125 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B--------CSSSEEEESCGGGCCC------SSCEE
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C--------CCCEEEEECccccCCc------cCccc
Confidence 588999999955 65 556777776899999999998 1 36788 8888765420 13689
Q ss_pred EEEEe
Q psy2376 479 GILFD 483 (896)
Q Consensus 479 ~il~d 483 (896)
.|+-|
T Consensus 126 ~Vvsn 130 (290)
T 2xyq_A 126 LIISD 130 (290)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99987
No 278
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=82.57 E-value=1.9 Score=47.18 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=63.2
Q ss_pred CccCHHHHHHHHHhHhCC------C--cEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccC------------
Q psy2376 802 KIITIKDLFHHITRKIGK------K--PIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI------------ 861 (896)
Q Consensus 802 ~~~~~~el~~~~~~~l~~------~--~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~------------ 861 (896)
.+|++.|+++.+.+.+.. + .+.+|+++++|+||++|-=.-.+.+++|.++|||++||=.-
T Consensus 3 ~~m~~~eii~~le~~~P~~~ae~wDn~GL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~ 82 (370)
T 2nyd_A 3 DPMKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKAN 82 (370)
T ss_dssp CCCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCTTSBCCCEEEESSCCHHHHHHHHHHTCCEEEESSCSSCSCCSCCCSS
T ss_pred CCcCHHHHHHHHHHhCCHhHcCCCCcCeEEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcccCCccccCcC
Confidence 457888999999887643 1 34578888999999999999999999999999999987211
Q ss_pred -CchHHHHHHHcCCeEEEeCChhh
Q psy2376 862 -SESTVYISRESGVAYFAAGHHAT 884 (896)
Q Consensus 862 -~~h~~~~a~~~g~~li~~gH~~s 884 (896)
...-...+.++|+++..+ |.+-
T Consensus 83 ~~~r~i~~li~~~Ialya~-HTnl 105 (370)
T 2nyd_A 83 GYGLIIRKLIQHDINLIAM-HTNL 105 (370)
T ss_dssp THHHHHHHHHHTTCEEEEC-CHHH
T ss_pred CHHHHHHHHHHCCCeEEEe-echh
Confidence 122246678899999876 7543
No 279
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=80.45 E-value=1.7 Score=46.09 Aligned_cols=53 Identities=9% Similarity=0.188 Sum_probs=41.2
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
+.+++++.... ++++++|.-+|.|--+.+.++. +.+++|+|+|+++++.|+++
T Consensus 224 l~~~~i~~~~~----~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 224 LAERLVRMFSF----VGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp HHHHHHHHHCC----TTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhCC----CCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHH
Confidence 33444444442 4899999999999998887764 35899999999999999764
No 280
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=80.40 E-value=3.5 Score=42.44 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=58.5
Q ss_pred cCHHHHHHHHHhHhCCC--------cEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccCC-------------
Q psy2376 804 ITIKDLFHHITRKIGKK--------PIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEIS------------- 862 (896)
Q Consensus 804 ~~~~el~~~~~~~l~~~--------~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~~------------- 862 (896)
|+..|+.+.+.+.+..+ .+.+ +++++|+||++|-=...+.+++|.+.|||++||=.--
T Consensus 1 M~~~ei~~~le~~~p~~~~~~~d~~GL~v-~~~~~V~~I~~~lD~t~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~~ 79 (247)
T 1nmo_A 1 MKNTELEQLINEKLNSAAISDYAPNGLQV-EGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMK 79 (247)
T ss_dssp CBHHHHHHHHHHHTTCTTSCCSSCCEEEE-CCCSBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTSCCCCCTHH
T ss_pred CcHHHHHHHHHHhCChhhhCCcCCCeeEE-CCCCccCEEEEEEcCCHHHHHHHHhCCCCEEEECCchhccCCCccccchH
Confidence 35678888888876421 2334 6678999999999999999999999999999872211
Q ss_pred chHHHHHHHcCCeEEEeCChhh
Q psy2376 863 ESTVYISRESGVAYFAAGHHAT 884 (896)
Q Consensus 863 ~h~~~~a~~~g~~li~~gH~~s 884 (896)
+.-...+.++|+++... |.+-
T Consensus 80 ~~~i~~li~~~I~ly~~-Htnl 100 (247)
T 1nmo_A 80 RNRLKTLLANDINLYGW-HLPL 100 (247)
T ss_dssp HHHHHHHHHTTCEEEEC-CHHH
T ss_pred HHHHHHHHHCCCEEEEe-eech
Confidence 11245678899999877 7553
No 281
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=80.22 E-value=2.7 Score=46.30 Aligned_cols=80 Identities=19% Similarity=0.245 Sum_probs=62.1
Q ss_pred ccCHHHHHHHHHhHhCC------C--cEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccC-------------
Q psy2376 803 IITIKDLFHHITRKIGK------K--PIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI------------- 861 (896)
Q Consensus 803 ~~~~~el~~~~~~~l~~------~--~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~------------- 861 (896)
.+++.|+++.+.+.+.. + .+.+|+++++|+||++|-=.-.+.+++|.++|||++||=.-
T Consensus 28 ~m~~~eii~~le~~aP~~lae~wDnvGL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~ 107 (397)
T 2gx8_A 28 IPNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 107 (397)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred cccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCccccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccCcCc
Confidence 46788999999887643 1 34578888999999999999999999999999999987211
Q ss_pred -CchHHHHHHHcCCeEEEeCChh
Q psy2376 862 -SESTVYISRESGVAYFAAGHHA 883 (896)
Q Consensus 862 -~~h~~~~a~~~g~~li~~gH~~ 883 (896)
+..-...+.++|+++..+ |.+
T Consensus 108 ~~~r~i~~li~~~Iavya~-HTn 129 (397)
T 2gx8_A 108 AYGKIIEKCIKNDIAIYAA-HTN 129 (397)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CHH
T ss_pred HHHHHHHHHHHCCCeEEEe-ech
Confidence 112246778899998876 754
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=80.18 E-value=2.1 Score=49.55 Aligned_cols=57 Identities=12% Similarity=-0.005 Sum_probs=45.4
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC--CCcEEEEEeCCHHHHHHhhcc-----cC-CCeEEEccCh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG--KKGRLIAIDKDTESVSLGNKI-----TD-SRFSIIHNCF 462 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~--~~~~~~~~D~d~~a~~~~~~~-----~~-~~~~~~~~~~ 462 (896)
++..++|-++|.|+-....++.+. +...++|+|+|+.+.+.|+.. .. +++.+.+++.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDt 285 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADT 285 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecce
Confidence 578999999999999999988863 356899999999999998742 11 4567777764
No 283
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=79.50 E-value=2.2 Score=46.48 Aligned_cols=65 Identities=17% Similarity=0.181 Sum_probs=50.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
+..++|.-.|.|..+..+++++ |+.+++++|. +.+++.+++. .+++++..++.+ + .+..|.|++.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~~-~-------~~~~D~v~~~ 258 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN--ENLNFVGGDMFK-S-------IPSADAVLLK 258 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC--SSEEEEECCTTT-C-------CCCCSEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC--CCcEEEeCccCC-C-------CCCceEEEEc
Confidence 6799999999999999999998 5789999999 8888877653 458888877643 1 1236777764
No 284
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=79.36 E-value=3.1 Score=48.53 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=54.2
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--C--CCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--D--SRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~--~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+..++|.-+|+|-.|..++++ .+.|.|+|..+++++.|+... . -++.+.+.+-+++.+-. .-.++|.|+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~fD~v~- 139 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAAL---EEGEFDLAI- 139 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHC---CTTSCSEEE-
T ss_pred CCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhc---cCCCccEEE-
Confidence 357899999999999999986 468999999999999997642 1 35788888877765432 223578654
Q ss_pred eccc
Q psy2376 483 DLGI 486 (896)
Q Consensus 483 dlG~ 486 (896)
+++|
T Consensus 140 ~~e~ 143 (569)
T 4azs_A 140 GLSV 143 (569)
T ss_dssp EESC
T ss_pred ECcc
Confidence 4444
No 285
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=79.06 E-value=4.3 Score=42.54 Aligned_cols=91 Identities=11% Similarity=0.087 Sum_probs=56.0
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC---CCcEE--EEEeCCHHHHHHhhccc-C----CC--eEEEccChhcHHHHHHh-c
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG---KKGRL--IAIDKDTESVSLGNKIT-D----SR--FSIIHNCFTELDIILKK-Y 472 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~---~~~~~--~~~D~d~~a~~~~~~~~-~----~~--~~~~~~~~~~~~~~l~~-~ 472 (896)
++..++|.-+|.|.-|..+++.+. ++.++ +|+|.++++++.+++.. . ++ +.+.+.+..++..-... .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 478999999999987776654431 45655 99999999999887642 1 23 34455555443321110 1
Q ss_pred CCCcccEEEEecccCccccCCCCCCc
Q psy2376 473 NIKKIDGILFDLGISSNQINNELRGF 498 (896)
Q Consensus 473 ~~~~~d~il~dlG~ss~q~~~~~rgf 498 (896)
.-.++|.|+....+ +.++|+++.+
T Consensus 132 ~~~~fD~V~~~~~l--~~~~d~~~~l 155 (292)
T 2aot_A 132 ELQKWDFIHMIQML--YYVKDIPATL 155 (292)
T ss_dssp CCCCEEEEEEESCG--GGCSCHHHHH
T ss_pred CCCceeEEEEeeee--eecCCHHHHH
Confidence 12368888876543 4455555443
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=78.83 E-value=1.6 Score=52.34 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=37.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcC--CCcEEEEEeCCHHHHHHh
Q psy2376 406 INGIYIDATFGQGGHSCKILERLG--KKGRLIAIDKDTESVSLG 447 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~--~~~~~~~~D~d~~a~~~~ 447 (896)
++..++|-++|.|+=..+++++.+ ...+++|+|+|+.+++.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 478999999999999999998874 235799999999999988
No 287
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=77.98 E-value=3.7 Score=44.62 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=59.4
Q ss_pred cchHHHhhhccccccc----cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-cCCCeEEEccChhc
Q psy2376 390 LFLNEAINWLNIENER----INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-TDSRFSIIHNCFTE 464 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~----~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-~~~~~~~~~~~~~~ 464 (896)
...+.+++.+...+ + +++.+||+==|.|..|..|+++..+ .+|+++++|+.-+..-+++ ..+|++++++++-+
T Consensus 39 ~i~~~Iv~~~~l~~-~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 39 TVYNKIFDKLDLTK-TYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp HHHHHHHHHHCGGG-TCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred HHHHHHHHhccCCc-ccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 35577777776542 1 3689999999999999999998633 4899999999987766554 35789999999866
Q ss_pred HHHH
Q psy2376 465 LDII 468 (896)
Q Consensus 465 ~~~~ 468 (896)
++.+
T Consensus 117 ~~~~ 120 (353)
T 1i4w_A 117 WSTY 120 (353)
T ss_dssp HHHH
T ss_pred hhhH
Confidence 6543
No 288
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=77.81 E-value=3.7 Score=40.89 Aligned_cols=74 Identities=14% Similarity=0.190 Sum_probs=49.9
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc-----c--CCCeEEEccCh---------------hc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-----T--DSRFSIIHNCF---------------TE 464 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~-----~--~~~~~~~~~~~---------------~~ 464 (896)
.+.+++. |.|+ |...+.+.+ +++|+++|.|++-.+.+++. . .+|++++++.= +.
T Consensus 31 a~~VLEi--GtGy-STl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 31 AEVILEY--GSGG-STVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp CSEEEEE--SCSH-HHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCEEEEE--CchH-HHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4567664 5665 555555553 78999999999999998763 3 56899988762 33
Q ss_pred HHHHHHh---c-CCCcccEEEEec
Q psy2376 465 LDIILKK---Y-NIKKIDGILFDL 484 (896)
Q Consensus 465 ~~~~l~~---~-~~~~~d~il~dl 484 (896)
+++|..+ . +..++|.|+.|=
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg 130 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDG 130 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECS
T ss_pred HHHHhhhhhccccCCCCCEEEEeC
Confidence 5555432 1 234689999884
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=77.00 E-value=1.8 Score=45.02 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=30.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHc------CCC-----cEEEEEeCCH
Q psy2376 406 INGIYIDATFGQGGHSCKILERL------GKK-----GRLIAIDKDT 441 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~------~~~-----~~~~~~D~d~ 441 (896)
+...++|.-||.|-.+..+++.. .|+ .+++++|.+|
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 36799999999999999998875 553 5999999998
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=76.88 E-value=2.2 Score=44.46 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=30.2
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE 442 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~ 442 (896)
+++.+||+.+|-||+|+..+++.+ -..|+|+|+-.+
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d 125 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQ 125 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccC
Confidence 488999999999999999887763 457999998654
No 291
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=76.84 E-value=3.8 Score=48.31 Aligned_cols=78 Identities=22% Similarity=0.199 Sum_probs=58.5
Q ss_pred CcEEEEEccCCChhHHHHHHHcC------------CCcEEEEEeCCHHHHHHhhcc----cCCCeEEEccChhcHHHHHH
Q psy2376 407 NGIYIDATFGQGGHSCKILERLG------------KKGRLIAIDKDTESVSLGNKI----TDSRFSIIHNCFTELDIILK 470 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~------------~~~~~~~~D~d~~a~~~~~~~----~~~~~~~~~~~~~~~~~~l~ 470 (896)
+.+++|.-.|.|-=+.+.+++.. ...||||+|.++.|+...+++ .++++++++++-+++.--..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 56999999999999877665532 234999999999998655432 57899999999999864334
Q ss_pred hcCCCcccEEEEec
Q psy2376 471 KYNIKKIDGILFDL 484 (896)
Q Consensus 471 ~~~~~~~d~il~dl 484 (896)
..+.++||.|+=.+
T Consensus 490 ~~~~ekVDIIVSEl 503 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL 503 (745)
T ss_dssp HTTCCCCSEEEECC
T ss_pred cCCCCcccEEEEec
Confidence 44456788887443
No 292
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=75.83 E-value=8.3 Score=39.46 Aligned_cols=80 Identities=11% Similarity=-0.073 Sum_probs=55.1
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+.+.++|.-+|.|==+..+. +..+++|+|+|+.+++.+++. ...++++.+.++..- ..-.++|.++.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~------~~~~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCA------PPAEAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTS------CCCCBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccC------CCCCCcchHHH
Confidence 36799999999887777766 578999999999999999864 356677776666322 11225777765
Q ss_pred ecccCccccCCCCCC
Q psy2376 483 DLGISSNQINNELRG 497 (896)
Q Consensus 483 dlG~ss~q~~~~~rg 497 (896)
.+ .-+.|++.+||
T Consensus 175 lk--~lh~LE~q~~~ 187 (253)
T 3frh_A 175 FK--LLPLLEREQAG 187 (253)
T ss_dssp ES--CHHHHHHHSTT
T ss_pred HH--HHHHhhhhchh
Confidence 43 23555555555
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=75.56 E-value=8.3 Score=42.12 Aligned_cols=72 Identities=17% Similarity=0.205 Sum_probs=52.6
Q ss_pred EEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc------------CCCeEEEccC-hhcHHHHHHhcCCC
Q psy2376 409 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT------------DSRFSIIHNC-FTELDIILKKYNIK 475 (896)
Q Consensus 409 ~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~------------~~~~~~~~~~-~~~~~~~l~~~~~~ 475 (896)
.++=.=.|.|+-.+++|+. ++ .+|...|+||+.++.+++.+ ++|++++.++ ++.+.+..++. .
T Consensus 208 rVLIIGgGdG~~~revlkh-~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~--~ 283 (381)
T 3c6k_A 208 DVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG--R 283 (381)
T ss_dssp EEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT--C
T ss_pred eEEEECCCcHHHHHHHHhc-CC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc--C
Confidence 3444667999999999986 44 69999999999999998631 2568876554 55566555442 2
Q ss_pred cccEEEEec
Q psy2376 476 KIDGILFDL 484 (896)
Q Consensus 476 ~~d~il~dl 484 (896)
++|.|+.|+
T Consensus 284 ~yDvIIvDl 292 (381)
T 3c6k_A 284 EFDYVINDL 292 (381)
T ss_dssp CEEEEEEEC
T ss_pred ceeEEEECC
Confidence 699999995
No 294
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=74.25 E-value=1.3 Score=45.88 Aligned_cols=44 Identities=11% Similarity=-0.151 Sum_probs=36.2
Q ss_pred ccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 405 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 405 ~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
.++..++|.-+|.|.|+...++.. -.+|+|+|.++.+++.+++.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~ 97 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKW 97 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHH
Confidence 358899999999999987766542 24799999999999999764
No 295
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=73.60 E-value=2.3 Score=44.89 Aligned_cols=70 Identities=16% Similarity=0.197 Sum_probs=51.9
Q ss_pred EEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---------cCCCeEEEccC-hhcHHHHHHhcCCCccc
Q psy2376 409 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---------TDSRFSIIHNC-FTELDIILKKYNIKKID 478 (896)
Q Consensus 409 ~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---------~~~~~~~~~~~-~~~~~~~l~~~~~~~~d 478 (896)
.++=.=.|.|+=.+.+++.. +..+|..+|+||+.++.+++. .+.|++++.++ ++-+ ++. -.+.|
T Consensus 86 ~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l----~~~-~~~yD 159 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV----NQT-SQTFD 159 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTT----SCS-SCCEE
T ss_pred eEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHH----hhc-cccCC
Confidence 44445678888888999875 456999999999999999763 25789887665 4433 222 24799
Q ss_pred EEEEec
Q psy2376 479 GILFDL 484 (896)
Q Consensus 479 ~il~dl 484 (896)
.|+.|+
T Consensus 160 vIi~D~ 165 (294)
T 3o4f_A 160 VIISDC 165 (294)
T ss_dssp EEEESC
T ss_pred EEEEeC
Confidence 999996
No 296
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=73.35 E-value=2 Score=45.02 Aligned_cols=43 Identities=9% Similarity=-0.144 Sum_probs=33.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
++..++|.-+|.|.++ .++.+. +..+|+|+|+++++++.+++.
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~-~~~~v~gvD~s~~~l~~a~~~ 113 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACS-HFEDITMTDFLEVNRQELGRW 113 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGG-GCSEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhcc-CCCeEEEeCCCHHHHHHHHHH
Confidence 4789999999999944 444443 245999999999999998764
No 297
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=71.61 E-value=3.9 Score=41.93 Aligned_cols=78 Identities=15% Similarity=0.273 Sum_probs=56.6
Q ss_pred cCHHHHHHHHHhHhCC---------CcEEE-cCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccC------------
Q psy2376 804 ITIKDLFHHITRKIGK---------KPIVI-GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI------------ 861 (896)
Q Consensus 804 ~~~~el~~~~~~~l~~---------~~~~~-g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~------------ 861 (896)
|+..|+.+.+.+.+.. ..+.+ |+ ++|+||++|-=...+.+++|.+.|||++||=.-
T Consensus 1 M~~~ei~~~le~~~p~~~~~~~~d~~GL~veG~--~~V~~I~~alD~t~~vi~eAi~~~adlIitHHp~~f~~~~~~~~~ 78 (242)
T 2yyb_A 1 MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGK--RTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFWGKPFPIVGH 78 (242)
T ss_dssp CBHHHHHHHHHHHTTGGGCTTCSSCCEEEECCC--SBCCCEEEEEECSHHHHHHHHHTTCSEEEEEECSCSSCCCCSCHH
T ss_pred CcHHHHHHHHHHhCCHhhhccCCCCCeEEEcCC--cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcCcCcccccccH
Confidence 3466778888776532 12345 54 889999999999999999999999999988321
Q ss_pred CchHHHHHHHcCCeEEEeCChhh
Q psy2376 862 SESTVYISRESGVAYFAAGHHAT 884 (896)
Q Consensus 862 ~~h~~~~a~~~g~~li~~gH~~s 884 (896)
+..-...+.++|+++... |.+-
T Consensus 79 ~~~~i~~li~~~I~ly~~-Ht~l 100 (242)
T 2yyb_A 79 HKRRLETLFQGGINLYAA-HLPL 100 (242)
T ss_dssp HHHHHHHHHHTTCEEEEC-SHHH
T ss_pred HHHHHHHHHHCCCeEEEe-ccHH
Confidence 112245678899999877 7553
No 298
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=69.73 E-value=4.6 Score=41.86 Aligned_cols=82 Identities=13% Similarity=0.034 Sum_probs=59.1
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhcHHHHHHhcCCCcccEEEEe
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~d 483 (896)
...++|.-+|.|==|..++... |..+++|+|+|+.+++.+++. .+-++++.+.++. ....-.+.|.+|..
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~------~~~p~~~~DvaL~l 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLL------EDRLDEPADVTLLL 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTT------TSCCCSCCSEEEET
T ss_pred CceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeec------ccCCCCCcchHHHH
Confidence 4588999999999999998875 678999999999999999864 3445666666552 22223368888876
Q ss_pred cccCccccCCCCCC
Q psy2376 484 LGISSNQINNELRG 497 (896)
Q Consensus 484 lG~ss~q~~~~~rg 497 (896)
+ +-+.||+.+||
T Consensus 206 k--ti~~Le~q~kg 217 (281)
T 3lcv_B 206 K--TLPCLETQQRG 217 (281)
T ss_dssp T--CHHHHHHHSTT
T ss_pred H--HHHHhhhhhhH
Confidence 5 34555555554
No 299
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=68.84 E-value=5.1 Score=41.91 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=34.0
Q ss_pred CcEEEEEccCCChhH--HH--HHHHcCC---CcEEEEEeCCHHHHHHhhc
Q psy2376 407 NGIYIDATFGQGGHS--CK--ILERLGK---KGRLIAIDKDTESVSLGNK 449 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs--~~--ll~~~~~---~~~~~~~D~d~~a~~~~~~ 449 (896)
+..+.|+-+|.|-.+ .+ +.+..++ +.+|+|.|+|+++++.|++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~ 155 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARS 155 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHh
Confidence 468999999999964 33 4566543 3599999999999999976
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=66.83 E-value=6.5 Score=40.59 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=39.9
Q ss_pred chHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcc
Q psy2376 391 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 450 (896)
Q Consensus 391 m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~ 450 (896)
+++.+++.... ++++++|.-+|.|-=+.+-++. +.+.+|+|+++++.+.++++
T Consensus 201 l~~~~i~~~~~----~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 201 LIERIIRASSN----PNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp HHHHHHHHHCC----TTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhCC----CCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHH
Confidence 34445544432 4899999999999776665553 36999999999999999765
No 301
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=65.16 E-value=2.3 Score=49.28 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=34.1
Q ss_pred cEEEEEccCCChhHHHHHHHcCC--------------CcEEEEEeCCHHHHHHhhc
Q psy2376 408 GIYIDATFGQGGHSCKILERLGK--------------KGRLIAIDKDTESVSLGNK 449 (896)
Q Consensus 408 ~~~vD~T~G~Gghs~~ll~~~~~--------------~~~~~~~D~d~~a~~~~~~ 449 (896)
+.++|-++|.|+=....++.+.. ...++|+|+|+.+.+.|+.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 38999999999988777654420 4589999999999999875
No 302
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=61.36 E-value=14 Score=38.60 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=53.0
Q ss_pred CcEEEEEccCCChhHHHHHHHcC----CCcEEEEEeCCHH--------------------------HHHHhhcc-----c
Q psy2376 407 NGIYIDATFGQGGHSCKILERLG----KKGRLIAIDKDTE--------------------------SVSLGNKI-----T 451 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~----~~~~~~~~D~d~~--------------------------a~~~~~~~-----~ 451 (896)
.+.++.+-...|+-+..+.+.++ ++++|++||..+. .++.+++. .
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 46899999999999988876653 4789999996310 12333332 2
Q ss_pred -CCCeEEEccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 452 -DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 452 -~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
.++++++.+.+.+ .|++....++|.|.+|-..
T Consensus 187 ~~~~I~li~Gda~e---tL~~~~~~~~d~vfIDaD~ 219 (282)
T 2wk1_A 187 LDEQVRFLPGWFKD---TLPTAPIDTLAVLRMDGDL 219 (282)
T ss_dssp CSTTEEEEESCHHH---HSTTCCCCCEEEEEECCCS
T ss_pred CcCceEEEEeCHHH---HHhhCCCCCEEEEEEcCCc
Confidence 4889999999954 3444333468999998753
No 303
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=61.23 E-value=12 Score=38.84 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=28.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE 442 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~ 442 (896)
+++.+||..+|.||.|+..+++.+ ...+.|+|+-.+
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvD 109 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRD 109 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCT
T ss_pred CCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEecc
Confidence 488999999999999998888753 456777777633
No 304
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=60.80 E-value=11 Score=41.92 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=37.8
Q ss_pred cCcEEEEEccCCChhHHHHHH-HcCCCcEEEEEeCCHHHHHHhhc
Q psy2376 406 INGIYIDATFGQGGHSCKILE-RLGKKGRLIAIDKDTESVSLGNK 449 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~-~~~~~~~~~~~D~d~~a~~~~~~ 449 (896)
++++++|+=.+-|.+|..+++ ..++.++|++|+-+|++.+..++
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 589999999999999999984 55445899999999999877654
No 305
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=60.69 E-value=15 Score=33.47 Aligned_cols=67 Identities=15% Similarity=0.303 Sum_probs=45.5
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecc
Q psy2376 415 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG 485 (896)
+|.|.-...+.+.+.. +.+|+++|+|++..+..++ ..+..+.++..+-+ .+++.+..++|.++.-.|
T Consensus 12 ~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~-~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 12 IGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---EGFDAVIADPTDES-FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEECCTTCHH-HHHHSCCTTCSEEEECCS
T ss_pred ECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---CCCcEEECCCCCHH-HHHhCCcccCCEEEEecC
Confidence 4666666666655432 3479999999998877654 24677777766643 456667778999987444
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=60.36 E-value=6.2 Score=41.44 Aligned_cols=36 Identities=22% Similarity=0.222 Sum_probs=30.7
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE 442 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~ 442 (896)
++..+||...+-||.|..++++.+ -..|+|+|+...
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~ 116 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIE 116 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCT
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEeccc
Confidence 489999999999999999999763 457999999653
No 307
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=59.91 E-value=6.4 Score=38.85 Aligned_cols=68 Identities=12% Similarity=0.054 Sum_probs=45.3
Q ss_pred HHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhc
Q psy2376 393 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 472 (896)
Q Consensus 393 ~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (896)
+++++.+... .++..++|.-+|.|..+..+. .+++|+|.++. ++++++.+..+++ .
T Consensus 56 ~~~~~~l~~~--~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~-----------~~~~~~~d~~~~~-----~ 111 (215)
T 2zfu_A 56 DRIARDLRQR--PASLVVADFGCGDCRLASSIR------NPVHCFDLASL-----------DPRVTVCDMAQVP-----L 111 (215)
T ss_dssp HHHHHHHHTS--CTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS-----------STTEEESCTTSCS-----C
T ss_pred HHHHHHHhcc--CCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC-----------CceEEEeccccCC-----C
Confidence 3455555432 247899999999999887762 57999999987 4556666655532 1
Q ss_pred CCCcccEEEEec
Q psy2376 473 NIKKIDGILFDL 484 (896)
Q Consensus 473 ~~~~~d~il~dl 484 (896)
.-.++|.|+...
T Consensus 112 ~~~~fD~v~~~~ 123 (215)
T 2zfu_A 112 EDESVDVAVFCL 123 (215)
T ss_dssp CTTCEEEEEEES
T ss_pred CCCCEeEEEEeh
Confidence 123578888643
No 308
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=57.32 E-value=3.2 Score=42.67 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=45.3
Q ss_pred cCcEEEEEccCCChhHHHHHHH--cCC-CcEEEEEeC--CHHHHHHhhcccCCC-eEEEcc-ChhcHHHHHHhcCCCccc
Q psy2376 406 INGIYIDATFGQGGHSCKILER--LGK-KGRLIAIDK--DTESVSLGNKITDSR-FSIIHN-CFTELDIILKKYNIKKID 478 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~--~~~-~~~~~~~D~--d~~a~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~~~~~~d 478 (896)
|++.+||+-++-||-|+...++ .++ .|+++|.|. +|... .-..-+ +++..+ +|.+++ -.++|
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~----~~~Gv~~i~~~~G~Df~~~~-------~~~~D 141 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM----QSYGWNIVTMKSGVDVFYKP-------SEISD 141 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC----CSTTGGGEEEECSCCGGGSC-------CCCCS
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc----cCCCceEEEeeccCCccCCC-------CCCCC
Confidence 4999999999999999999998 543 577888883 32110 000112 244445 776521 22578
Q ss_pred EEEEecccC
Q psy2376 479 GILFDLGIS 487 (896)
Q Consensus 479 ~il~dlG~s 487 (896)
.||=|.+-|
T Consensus 142 vVLSDMAPn 150 (269)
T 2px2_A 142 TLLCDIGES 150 (269)
T ss_dssp EEEECCCCC
T ss_pred EEEeCCCCC
Confidence 888776654
No 309
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=55.54 E-value=7.4 Score=40.19 Aligned_cols=35 Identities=6% Similarity=-0.000 Sum_probs=25.8
Q ss_pred HHHHHHHHhccccCceEEEEeecchh-----HHHHHHHHh
Q psy2376 602 SIALKIGFKKLNIKGRIVVISFHSLE-----DRIVKNFIN 636 (896)
Q Consensus 602 ~~~l~~~~~~l~~~g~~~visfhsle-----dr~vk~~~~ 636 (896)
+++++++.++|||||++++++|...+ |+++.++..
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLYH 154 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHHh
Confidence 35788888999999999999986443 445555544
No 310
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=55.09 E-value=17 Score=39.46 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=53.0
Q ss_pred ccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEec
Q psy2376 405 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 405 ~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dl 484 (896)
++|..+||.-..-||=|..++++ +++|+|+|.-+-+-.. ....++++++.+..... ..-+++|.++-|.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~~~l---~~~~~V~~~~~d~~~~~-----~~~~~~D~vvsDm 278 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMAQSL---MDTGQVTWLREDGFKFR-----PTRSNISWMVCDM 278 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCCHHH---HTTTCEEEECSCTTTCC-----CCSSCEEEEEECC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcChhh---ccCCCeEEEeCcccccc-----CCCCCcCEEEEcC
Confidence 35999999999999999999987 4799999975432111 12467888877643221 1124689999888
Q ss_pred ccCccc
Q psy2376 485 GISSNQ 490 (896)
Q Consensus 485 G~ss~q 490 (896)
-.+..+
T Consensus 279 ~~~p~~ 284 (375)
T 4auk_A 279 VEKPAK 284 (375)
T ss_dssp SSCHHH
T ss_pred CCChHH
Confidence 776544
No 311
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=54.90 E-value=19 Score=32.89 Aligned_cols=68 Identities=12% Similarity=0.115 Sum_probs=48.3
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 415 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+|.|.-...+++.+.. +..|+++|+|++..+..++ ..+..++++..+-+ .|++.++.+.|.++.-.+-
T Consensus 13 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 13 VGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAANEE-IMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHH-HHHHTTGGGCSEEEECCSC
T ss_pred ECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHH-HHHhcCcccCCEEEEECCC
Confidence 5777666666665522 3579999999999887754 35677777776544 4666777789999887664
No 312
>2edu_A Kinesin-like protein KIF22; kinesin-like DNA binding domain, helix turn helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.2.7
Probab=54.86 E-value=2.4 Score=36.93 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=42.1
Q ss_pred CCCCccccCCCCCCCC----HHHHHhccCHHHHHHHHHHhcCcccHHHHHHHHHHHhcc-CCCcchHHHH
Q psy2376 502 LDGPLDMRMDITRGIS----ASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLV 566 (896)
Q Consensus 502 ~~~~ldmrm~~~~~~~----a~~~~~~~~~~~l~~i~~~yg~~~~~~~~a~~i~~~r~~-~~~~~t~~l~ 566 (896)
.|..++++|||+.... .---||+.+.++|..|= .-..+.|++|++.|+. .++.+..||.
T Consensus 10 ~~~~~~l~~~pe~~~~~~~~~~i~iN~a~~~~L~~ip------GIG~~~A~~Il~~r~~~g~f~s~edL~ 73 (98)
T 2edu_A 10 AEDCWELQISPELLAHGRQKILDLLNEGSARDLRSLQ------RIGPKKAQLIVGWRELHGPFSQVEDLE 73 (98)
T ss_dssp CCSCSTTTSCHHHHHHHHHHHHHHHHHSCHHHHHHST------TCCHHHHHHHHHHHHHHCCCSSGGGGG
T ss_pred CCCcceeccCHHHHHHHHhccCeehhhCCHHHHHHCC------CCCHHHHHHHHHHHHhcCCcCCHHHHH
Confidence 4778999999853211 11137999999987652 2346889999999975 7998888863
No 313
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=52.40 E-value=52 Score=33.20 Aligned_cols=121 Identities=15% Similarity=0.183 Sum_probs=66.7
Q ss_pred HHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeEE---EecCCCCCCCCCcHHHHHHHHcCCCccccC
Q psy2376 705 LIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLY---AYHLPLDMHPKLGNNAQLAKILNFSCTRRF 781 (896)
Q Consensus 705 vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy---~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~ 781 (896)
.++.+.+.|||.|..|- ... .....+.++.+.++|+.+. ..+|+.+...++ .+.+++=-.-..
T Consensus 72 ~i~~~~~aGAd~itvh~----Ea~----~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~------l~~~D~VlvmsV 137 (231)
T 3ctl_A 72 YIAQLARAGADFITLHP----ETI----NGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYY------IHKADKITVMTV 137 (231)
T ss_dssp THHHHHHHTCSEEEECG----GGC----TTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTT------GGGCSEEEEESS
T ss_pred HHHHHHHcCCCEEEECc----ccC----CccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHH------HhcCCEEEEeee
Confidence 57999999999999983 110 1234677888888887632 455776665431 111110000001
Q ss_pred ccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEc
Q psy2376 782 SKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISG 859 (896)
Q Consensus 782 ~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITG 859 (896)
.++.| |+- + .+ +..+-++++++..+.. +.+ -.|.+-+|=..+-++++.++|||++|.|
T Consensus 138 -~pGfg--gQ~-------f-~~-~~l~kI~~lr~~~~~~-----~~~---~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 138 -DPGFA--GQP-------F-IP-EMLDKLAELKAWRERE-----GLE---YEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp -CTTCS--SCC-------C-CT-THHHHHHHHHHHHHHH-----TCC---CEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred -ccCcC--Ccc-------c-cH-HHHHHHHHHHHHHhcc-----CCC---ceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 11111 321 1 12 3334445555544210 001 1377777777778889999999999999
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=51.25 E-value=63 Score=33.13 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=55.6
Q ss_pred CcEEEEEccCCChhHHHHHHH------cCCCcEEEEEe-----CCHH----------------------HHHHh------
Q psy2376 407 NGIYIDATFGQGGHSCKILER------LGKKGRLIAID-----KDTE----------------------SVSLG------ 447 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~------~~~~~~~~~~D-----~d~~----------------------a~~~~------ 447 (896)
.+.++.|=.-.||.+..+.+. .+++.+|++|| -++. -++..
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 468999999999988886542 24678999999 2221 01110
Q ss_pred -hcc--cCCCeEEEccChhc-HHHHHHhcCCCcccEEEEeccc
Q psy2376 448 -NKI--TDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 448 -~~~--~~~~~~~~~~~~~~-~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+++ ..+|++++.++|.+ +++++++....++|.+.+|.+.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~ 192 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL 192 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc
Confidence 111 24889999999976 6777766555579999999875
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=50.62 E-value=9.4 Score=40.84 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=34.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT 451 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~ 451 (896)
+|++++|.-+|.|-=..+ +.++ +.+.+|+|+++.+.+.++++.
T Consensus 252 ~~~~VlDpF~GsGtt~~a-a~~~--gr~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLV-AERE--SRKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp TTCEEEETTCTTCHHHHH-HHHT--TCEEEEEESCHHHHHHHHGGG
T ss_pred CCCEEEECCCCCCHHHHH-HHHc--CCCEEEEeCCHHHHHHHHHHH
Confidence 599999999999864444 4444 468999999999999997753
No 316
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=50.22 E-value=41 Score=34.81 Aligned_cols=74 Identities=12% Similarity=0.131 Sum_probs=53.6
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhcCCCcccEEEEecccCc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKYNIKKIDGILFDLGISS 488 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~d~il~dlG~ss 488 (896)
.|=|+||=-.++.+++.. +.+|+..|++++..+.+.+....++.++..+.++ +.+.+++. +++|.++-+-|+..
T Consensus 21 VTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~nAg~~~ 98 (291)
T 3rd5_A 21 ITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLINNAGIMA 98 (291)
T ss_dssp EECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEECCCCCS
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEECCcCCC
Confidence 466777766666666532 4699999999998877655446678888877655 55556655 47999999999863
No 317
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=49.04 E-value=36 Score=33.95 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=50.9
Q ss_pred cCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecc
Q psy2376 415 FGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG 485 (896)
+|.|.-...+++.+...+.|+++|+|++..+..+ ..+.+++++..+-+ .|++.++.+.|.++.-.+
T Consensus 15 ~G~G~~G~~la~~L~~~g~v~vid~~~~~~~~~~----~~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 15 CGWSESTLECLRELRGSEVFVLAEDENVRKKVLR----SGANFVHGDPTRVS-DLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCCHHHHHHHHHSTTSEEEEEESCGGGHHHHHH----TTCEEEESCTTCHH-HHHHTTCTTCSEEEECCS
T ss_pred ECCChHHHHHHHHHHhCCeEEEEECCHHHHHHHh----cCCeEEEcCCCCHH-HHHhcCcchhcEEEEcCC
Confidence 5888888999999866555999999999876654 34788888876654 566677888999987553
No 318
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=47.04 E-value=27 Score=32.25 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=47.0
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCH-HHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecc
Q psy2376 415 FGQGGHSCKILERLGK-KGRLIAIDKDT-ESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~-~~~~~~~D~d~-~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG 485 (896)
+|.|.-...+.+.+.. +..|..+|+|+ +..+..++.....+.+++++..+-+ .+++.++.+.|.++.-.+
T Consensus 9 ~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 9 CGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSS-VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHH-HHHHHTTTTCSEEEECSS
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHH-HHHHcChhhCCEEEEecC
Confidence 3777777777766532 34799999984 4443333323445888888877644 566667778999998765
No 319
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=46.86 E-value=14 Score=32.73 Aligned_cols=44 Identities=14% Similarity=0.324 Sum_probs=35.2
Q ss_pred ecCchHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCC
Q psy2376 838 TGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 881 (896)
Q Consensus 838 ~Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH 881 (896)
.|.|....+.....|||++|||.+.........+.|+.++....
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~~~ 91 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRNAFETLKAAGVKVYRFEG 91 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSSCHHHHHTTTCEEECCCS
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhHHHHHHHCCCEEEECCC
Confidence 45555566666788999999999999988887889999987543
No 320
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=46.04 E-value=32 Score=36.76 Aligned_cols=71 Identities=14% Similarity=0.099 Sum_probs=48.8
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+-.++|.-.|.||-+..+.+. + -..+.++|+|+.|.+.-+..+.+.. ++ ++.++..+ .++.+|.++.+.=+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~~~~---~~---Di~~~~~~-~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFGEKP---EG---DITQVNEK-TIPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHSCCC---BS---CGGGSCGG-GSCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcCCCC---cC---CHHHcCHh-hCCCCCEEEECCCC
Confidence 468999999999999999876 3 3468999999999987766443321 33 33332221 23468888887544
No 321
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=46.01 E-value=10 Score=36.97 Aligned_cols=41 Identities=10% Similarity=-0.065 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHh
Q psy2376 596 QELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 636 (896)
Q Consensus 596 ~el~~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~ 636 (896)
+.++.++++++.+.++|+|||+++++.+..-+..-+++.++
T Consensus 138 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~ 178 (215)
T 4dzr_A 138 DGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFA 178 (215)
T ss_dssp CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTG
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHH
Confidence 34566688999999999999997666655444455566666
No 322
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=45.90 E-value=13 Score=38.40 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHh
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 636 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~ 636 (896)
+.+.+|+++.+.|||||++++.-.+..+|....+.+.
T Consensus 156 ~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~ 192 (261)
T 4gek_A 156 ERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLF 192 (261)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHH
T ss_pred hHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHH
Confidence 3456789999999999999998888878776655443
No 323
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=45.50 E-value=15 Score=38.26 Aligned_cols=84 Identities=17% Similarity=0.148 Sum_probs=58.1
Q ss_pred hHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEEEccC-hhcHHHH
Q psy2376 392 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNC-FTELDII 468 (896)
Q Consensus 392 ~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~~~~~-~~~~~~~ 468 (896)
++..++.++.-+ ++.++|+--|.|.=+...|+. ..+++.+|.++++.+.-++.. .+|+++++.+ ++.+...
T Consensus 80 l~~yf~~l~~~n---~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 80 FLEYISVIKQIN---LNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp GHHHHHHHHHHS---SSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHhc---CCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHh
Confidence 345555555432 455789999999999998883 359999999999998876642 4679998887 5555544
Q ss_pred HHhcCCCcccEEEEe
Q psy2376 469 LKKYNIKKIDGILFD 483 (896)
Q Consensus 469 l~~~~~~~~d~il~d 483 (896)
++. + ++.|.|++|
T Consensus 154 ~~~-~-~~fdLVfiD 166 (283)
T 2oo3_A 154 LPP-P-EKRGLIFID 166 (283)
T ss_dssp CSC-T-TSCEEEEEC
T ss_pred cCC-C-CCccEEEEC
Confidence 332 1 235666654
No 324
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=45.49 E-value=3.5e+02 Score=30.64 Aligned_cols=65 Identities=11% Similarity=0.217 Sum_probs=51.0
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEE
Q psy2376 415 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 482 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~ 482 (896)
+|.|.-+..+++.+.. +..++.+|.|++.++..++.+ .+..++++-.+ ++.|++.|+.+.|.++.
T Consensus 133 ~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~--~~~~i~Gd~~~-~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 133 FGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQE--GFKVVYGSPTD-AHVLAGLRVAAARSIIA 198 (565)
T ss_dssp ESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSC--SSEEEESCTTC-HHHHHHTTGGGCSEEEE
T ss_pred ECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--CCeEEEeCCCC-HHHHHhcCcccCCEEEE
Confidence 6888888889888754 447999999999987775421 57888888766 44578889999999997
No 325
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=45.44 E-value=19 Score=42.12 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=50.7
Q ss_pred CcEEEEEccCCChhHHHHHHHc---CCCcEEEEEeCCHHHHHHhhcc----cCCCeEEEccChhcHHHHHHhcCCCcccE
Q psy2376 407 NGIYIDATFGQGGHSCKILERL---GKKGRLIAIDKDTESVSLGNKI----TDSRFSIIHNCFTELDIILKKYNIKKIDG 479 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~---~~~~~~~~~D~d~~a~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~d~ 479 (896)
+.+++|.=.|.|--+.+-+++. +...||||++..|.|...-+.. .++++++++++-++++ +. ++||.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~--LP----EKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV--AP----EKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC--CS----SCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc--CC----cccCE
Confidence 4689999999999966666654 2234899999999987433221 5789999999988763 11 36888
Q ss_pred EE
Q psy2376 480 IL 481 (896)
Q Consensus 480 il 481 (896)
|+
T Consensus 432 IV 433 (637)
T 4gqb_A 432 IV 433 (637)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 326
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=45.25 E-value=43 Score=35.91 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=51.9
Q ss_pred cEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHH-HHHHhcCCCcccEEEEecc
Q psy2376 408 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 408 ~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~d~il~dlG 485 (896)
-.++|.-.|.||-+..+.++--+-..|+++|+|+.|.+..++...+ ..+++++-.++. +.+.+. ++|.++.+.=
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-~~~~~~Di~~~~~~~~~~~---~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-TQLLAKTIEGITLEEFDRL---SFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-SCEECSCGGGCCHHHHHHH---CCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-cccccCCHHHccHhHcCcC---CcCEEEEcCC
Confidence 4689999999999999988721123799999999999888765432 345666665553 223321 4788888753
No 327
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=45.12 E-value=69 Score=32.42 Aligned_cols=124 Identities=13% Similarity=0.025 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHc---------CCe-EE--EecCCCCCCCCCcHHHHHH
Q psy2376 703 LDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIIN---------KIN-LY--AYHLPLDMHPKLGNNAQLA 770 (896)
Q Consensus 703 ~~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~---------~I~-vy--~~Ht~lD~~~~~G~n~~la 770 (896)
...++.+.+.|||.|..|=-- .+...+.++.+.++ |.. -. ..||+.+...++
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea---------~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~------- 145 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQ---------YHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPY------- 145 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTC---------TTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTT-------
T ss_pred HHHHHHHHHcCCCEEEEecCC---------cccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHH-------
Confidence 347999999999999998321 12245677777777 332 22 458888776431
Q ss_pred HHcCCCccccCccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCchHHHHHHHH
Q psy2376 771 KILNFSCTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 850 (896)
Q Consensus 771 ~~Lgl~~~~~~~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~ 850 (896)
+..-+.--+..-+.|.-|+- + .+ +..+-++++++..+.. +.. -.|.+-+|=..+-++++.+
T Consensus 146 --l~~~D~vlvMsv~pgfggq~-------f-~~-~~l~ki~~lr~~~~~~-------~~~-~~I~vdGGI~~~~~~~~~~ 206 (237)
T 3cu2_A 146 --LDQIDVIQLLTLDPRNGTKY-------P-SE-LILDRVIQVEKRLGNR-------RVE-KLINIDGSMTLELAKYFKQ 206 (237)
T ss_dssp --TTTCSEEEEESEETTTTEEC-------C-HH-HHHHHHHHHHHHHGGG-------GGG-CEEEEESSCCHHHHHHHHH
T ss_pred --hhcCceeeeeeeccCcCCee-------c-Ch-hHHHHHHHHHHHHHhc-------CCC-ceEEEECCcCHHHHHHHHH
Confidence 10000000000001111220 1 11 2223334445444210 111 2477777777888999999
Q ss_pred --cCCcEEEEccC
Q psy2376 851 --EGVTAYISGEI 861 (896)
Q Consensus 851 --~g~D~~ITGd~ 861 (896)
+|||.++.|--
T Consensus 207 ~~aGad~~VvGSa 219 (237)
T 3cu2_A 207 GTHQIDWLVSGSA 219 (237)
T ss_dssp SSSCCCCEEECGG
T ss_pred hCCCCcEEEEeeH
Confidence 99999999954
No 328
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=45.00 E-value=16 Score=38.70 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=28.0
Q ss_pred HHHHHHHHhccccCceEEEE--eecchhHH-HHHHHHhh
Q psy2376 602 SIALKIGFKKLNIKGRIVVI--SFHSLEDR-IVKNFINF 637 (896)
Q Consensus 602 ~~~l~~~~~~l~~~g~~~vi--sfhsledr-~vk~~~~~ 637 (896)
++.|+++.++|||||++++. |+|.-|+. .|++++++
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~ 264 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDN 264 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhc
Confidence 67889999999999999875 46666755 56777775
No 329
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=44.89 E-value=11 Score=39.65 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHhh
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF 637 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~~ 637 (896)
-+++.++.+.++|||||++++..|+.-+..-+.+.+++
T Consensus 149 l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~ 186 (290)
T 2xyq_A 149 FFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGH 186 (290)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHH
Confidence 34678899999999999999988887655566666665
No 330
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=44.30 E-value=60 Score=35.34 Aligned_cols=73 Identities=25% Similarity=0.190 Sum_probs=50.2
Q ss_pred EEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHH-HHHHh--cCCCcccEEEEec
Q psy2376 409 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD-IILKK--YNIKKIDGILFDL 484 (896)
Q Consensus 409 ~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~-~~l~~--~~~~~~d~il~dl 484 (896)
.++|.-.|.||-+..+.++ + -..+.++|+|+.|.+..+.... ...+++++-.++. +.+.+ .+..++|.++.+.
T Consensus 4 ~vidLFsG~GGlslG~~~a-G-~~~v~avE~d~~a~~t~~~N~~-~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARA-G-FDVKMAVEIDQHAINTHAINFP-RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp EEEEETCTTSHHHHHHHHH-T-CEEEEEECSCHHHHHHHHHHCT-TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred eEEEEccCcCHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHhCC-CCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 5899999999999999887 3 3368899999999887765432 3566777666542 11211 1224688888653
No 331
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=43.87 E-value=25 Score=32.29 Aligned_cols=40 Identities=15% Similarity=0.280 Sum_probs=31.1
Q ss_pred chHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCC
Q psy2376 841 AQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 881 (896)
Q Consensus 841 g~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH 881 (896)
|....+...+.|||++|||.+.........+ |+.++...-
T Consensus 68 g~~~~~~L~~~gv~~VI~g~iG~~a~~~L~~-GI~v~~~~~ 107 (136)
T 2re2_A 68 GVFMLKSALDHGANALVLSEIGSPGFNFIKN-KMDVYIVPE 107 (136)
T ss_dssp HHHHHHHHHHTTCSEEEESCCBHHHHHHHTT-TSEEEECCS
T ss_pred cHHHHHHHHHcCCCEEEECCCCHhHHHHHHC-CCEEEEcCC
Confidence 3356666677899999999998888776667 999988654
No 332
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=43.83 E-value=46 Score=35.33 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=33.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCH---HHHHHhhcc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDT---ESVSLGNKI 450 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~---~a~~~~~~~ 450 (896)
+|++++|.-+|.|-=..+-++. +.+.+|+|+++ +..+.++++
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~R 286 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTF 286 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHH
T ss_pred CCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHH
Confidence 5999999999998766555544 35899999999 888888764
No 333
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=42.57 E-value=68 Score=32.04 Aligned_cols=79 Identities=16% Similarity=0.202 Sum_probs=53.4
Q ss_pred CcEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhcCCCcccEEEE
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKYNIKKIDGILF 482 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~d~il~ 482 (896)
++.++ .|=|+||=-.++.+++.. +.+|+..|++++.++...+...+++.++..+.++ +.+.+++. +++|.++-
T Consensus 14 ~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~ 90 (249)
T 3f9i_A 14 GKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILVC 90 (249)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEEE
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence 44433 577777766666666532 4689999999998877655445678888776654 55556654 47999999
Q ss_pred ecccCc
Q psy2376 483 DLGISS 488 (896)
Q Consensus 483 dlG~ss 488 (896)
+-|+..
T Consensus 91 ~Ag~~~ 96 (249)
T 3f9i_A 91 NAGITS 96 (249)
T ss_dssp CCC---
T ss_pred CCCCCC
Confidence 999864
No 334
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=42.39 E-value=12 Score=38.83 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccccCceEEEEe--ecchhH-HHHHHHHhhc
Q psy2376 601 LSIALKIGFKKLNIKGRIVVIS--FHSLED-RIVKNFINFN 638 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~vis--fhsled-r~vk~~~~~~ 638 (896)
.++.|+.+.++|||||++++.| +|.-|+ ..|++++++.
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 4677999999999999998754 666674 4668888654
No 335
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=41.57 E-value=14 Score=35.98 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhccccCceEEEEeecc
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.+..+++|+.+.++|+|||++++.++..
T Consensus 135 ~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 135 VHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 4667888999999999999999999876
No 336
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=40.54 E-value=20 Score=41.21 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=34.9
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCC------------CcEEEEEeCCHHHHHHhhc
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGK------------KGRLIAIDKDTESVSLGNK 449 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~------------~~~~~~~D~d~~a~~~~~~ 449 (896)
++..++|-++|.||--....+.+.. +..++|.|+|+.+...|+-
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 4788999999999987766654422 2469999999999988863
No 337
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=40.37 E-value=1.3e+02 Score=31.32 Aligned_cols=75 Identities=9% Similarity=-0.008 Sum_probs=50.8
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcE-EEEEeCCHHHHHHhhcccCCCeEEEccChhcHH-HHHHhcCCCcccEEEEe
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGR-LIAIDKDTESVSLGNKITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFD 483 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~-~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~d~il~d 483 (896)
..-.++|.-.|.||=+..+.+. +-+.+ |+++|+|+.|.+.-+....+ ...++++-.+++ +.+.+. +++|.++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~~-~~~~~~DI~~i~~~~i~~~--~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQG-KIMYVGDVRSVTQKHIQEW--GPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTTT-CEEEECCGGGCCHHHHHHT--CCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCCC-CceeCCChHHccHHHhccc--CCcCEEEec
Confidence 3568999999999999998775 33433 79999999998765544332 345556655543 223332 358888776
Q ss_pred c
Q psy2376 484 L 484 (896)
Q Consensus 484 l 484 (896)
.
T Consensus 91 p 91 (295)
T 2qrv_A 91 S 91 (295)
T ss_dssp C
T ss_pred C
Confidence 4
No 338
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=39.37 E-value=45 Score=29.80 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=34.1
Q ss_pred cCchHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCC
Q psy2376 839 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 881 (896)
Q Consensus 839 Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH 881 (896)
|.|....+.....|||++|||.+.........+.|+.++....
T Consensus 52 g~g~~~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~~~ 94 (124)
T 1eo1_A 52 GAGIRTAQIIANNGVKAVIASSPGPNAFEVLNELGIKIYRATG 94 (124)
T ss_dssp SCSTTHHHHHHHTTCCEEEECCSSHHHHHHHHHHTCEEEECCS
T ss_pred CCCHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCEEEEcCC
Confidence 4454566666789999999999999888777888999988543
No 339
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=39.13 E-value=24 Score=35.30 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHh
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 636 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~ 636 (896)
..++.++.+.++|||||++++..+..-+...+++...
T Consensus 141 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 177 (245)
T 3ggd_A 141 KRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLE 177 (245)
T ss_dssp GHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHh
Confidence 3456788888999999999999987766555554443
No 340
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=39.11 E-value=18 Score=32.34 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=33.7
Q ss_pred cCchHHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeCC
Q psy2376 839 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 881 (896)
Q Consensus 839 Gsg~~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~gH 881 (896)
|.|....+...+.|||++|||.+.........+.|+.++....
T Consensus 54 g~g~~~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~~~ 96 (120)
T 2wfb_A 54 GAGINAAQVLAKSGAGVLLTGYVGPKAFQALQAAGIKVGQDLE 96 (120)
T ss_dssp CHHHHHHHHHHHHTEEEEECSCCCHHHHHHHHHTTCEEECCCT
T ss_pred CchHHHHHHHHHCCCCEEEECCCCHhHHHHHHHCCCEEEEcCC
Confidence 3333466666678999999999999988887889999998643
No 341
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=38.59 E-value=37 Score=30.42 Aligned_cols=68 Identities=19% Similarity=0.255 Sum_probs=42.9
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 415 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+|.|+-...+++.+.. +.+|+.+|++++..+..++. ....+.++..+. +.+++.+..++|.++.-.|-
T Consensus 12 ~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~---~~~~~~~d~~~~-~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 12 IGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY---ATHAVIANATEE-NELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp ECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT---CSEEEECCTTCH-HHHHTTTGGGCSEEEECCCS
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---CCEEEEeCCCCH-HHHHhcCCCCCCEEEECCCC
Confidence 3556655555555422 34799999999877655432 235566666653 34555556679999988774
No 342
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=38.58 E-value=11 Score=36.39 Aligned_cols=29 Identities=7% Similarity=-0.014 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhH
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLED 628 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsled 628 (896)
..++.++.+.++|+|||+++++++++-+|
T Consensus 114 ~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 142 (199)
T 2xvm_A 114 TIPGLIANMQRCTKPGGYNLIVAAMDTAD 142 (199)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEBCCSS
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEeeccCC
Confidence 45677899999999999999999887544
No 343
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=36.44 E-value=17 Score=34.48 Aligned_cols=60 Identities=12% Similarity=-0.066 Sum_probs=43.3
Q ss_pred cCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEec
Q psy2376 406 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 406 ~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dl 484 (896)
+|..++|.+.|. +++|.++++++.+++...+++++++.+..+++. ....-.++|.|+...
T Consensus 12 ~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~--~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQ--SAHKESSFDIILSGL 71 (176)
T ss_dssp TTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGG--GCCCSSCEEEEEECC
T ss_pred CCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCcc--ccCCCCCEeEEEECC
Confidence 588999998764 249999999999987655568999888877641 001223689998653
No 344
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=36.22 E-value=46 Score=35.38 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=51.2
Q ss_pred cCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEec
Q psy2376 415 FGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDL 484 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dl 484 (896)
+|.|.-...+++.+...+++..+|.|++..+ .++ ..+..++++-.+-+ .|++.++.+.|.++.-.
T Consensus 121 ~G~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~-~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 121 CGWSESTLECLRELRGSEVFVLAEDENVRKK-VLR---SGANFVHGDPTRVS-DLEKANVRGARAVIVDL 185 (336)
T ss_dssp ESCCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH---TTCEEEESCTTSHH-HHHHTCSTTEEEEEECC
T ss_pred ECCcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh---CCcEEEEeCCCCHH-HHHhcChhhccEEEEcC
Confidence 5888888999988865555999999999887 543 46788888876654 56777888999999855
No 345
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=35.79 E-value=86 Score=30.03 Aligned_cols=70 Identities=11% Similarity=0.171 Sum_probs=50.4
Q ss_pred ccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhcCCCcccEEEEecccCc
Q psy2376 414 TFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKYNIKKIDGILFDLGISS 488 (896)
Q Consensus 414 T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~d~il~dlG~ss 488 (896)
|=|.||=..++.+++-.. +|+++|++++..+...+.... +++..+..+ +.+.+++ .+++|.++.+-|++.
T Consensus 6 tGasg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 6 TGATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEE--AGPLDLLVHAVGKAG 78 (207)
T ss_dssp ETTTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH--HCSEEEEEECCCCCC
T ss_pred EcCCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCcCC
Confidence 557788888999998777 999999999877655432222 666666554 5555554 336999999999763
No 346
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=35.47 E-value=26 Score=32.86 Aligned_cols=95 Identities=14% Similarity=-0.002 Sum_probs=57.5
Q ss_pred ccchHHHhhhccccccccCcEEEEEccCCCh-hHHHHHHHcCCCcEEEEEeCCHHHHHHhhc-ccC------CCeEEE--
Q psy2376 389 FLFLNEAINWLNIENERINGIYIDATFGQGG-HSCKILERLGKKGRLIAIDKDTESVSLGNK-ITD------SRFSII-- 458 (896)
Q Consensus 389 ~~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gg-hs~~ll~~~~~~~~~~~~D~d~~a~~~~~~-~~~------~~~~~~-- 458 (896)
..|-+.+.+++...- ++++.++|.-.|.|- =+..|.++. +..|.|.|+.|.|++..+. +++ +.+.++
T Consensus 19 ~~m~e~LaeYI~~~~-~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 19 SHMWNDLAVYIIRCS-GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp CHHHHHHHHHHHHHS-CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEE
T ss_pred hhHHHHHHHHHHhcC-CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccceEEccCCCCcccccCCcCEEEE
Confidence 456666777766432 346899999999995 555555545 4579999999999872221 111 233444
Q ss_pred -c---cChhcHHHHHHhcCCCcccEEEEecccCcc
Q psy2376 459 -H---NCFTELDIILKKYNIKKIDGILFDLGISSN 489 (896)
Q Consensus 459 -~---~~~~~~~~~l~~~~~~~~d~il~dlG~ss~ 489 (896)
+ +=+.-+-++-++. ..|.++-=||--++
T Consensus 96 irPP~El~~~i~~lA~~v---~adliI~pL~~E~~ 127 (153)
T 2k4m_A 96 IRPPAEIHSSLMRVADAV---GARLIIKPLTGEDI 127 (153)
T ss_dssp ESCCTTTHHHHHHHHHHH---TCEEEEECBTTBCC
T ss_pred cCCCHHHHHHHHHHHHHc---CCCEEEEcCCCCcC
Confidence 1 1122333333443 47888888876555
No 347
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=35.20 E-value=25 Score=33.96 Aligned_cols=29 Identities=10% Similarity=0.075 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecchh
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHSLE 627 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhsle 627 (896)
+..+.+|+.+.++|+|||++++.+++.-.
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 46778899999999999999998887543
No 348
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=34.92 E-value=22 Score=34.79 Aligned_cols=25 Identities=4% Similarity=-0.185 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhccccCceEEEEeec
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
..++.++.+.++|||||++++++++
T Consensus 118 ~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 118 MRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp HHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 4467789999999999997777654
No 349
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=33.95 E-value=31 Score=37.44 Aligned_cols=36 Identities=11% Similarity=0.089 Sum_probs=27.6
Q ss_pred HHHHHHHHHhccccCceEEEEeecchhH-----HHHHHHHh
Q psy2376 601 LSIALKIGFKKLNIKGRIVVISFHSLED-----RIVKNFIN 636 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~visfhsled-----r~vk~~~~ 636 (896)
++.+++.+.+.|+||||++++++++.++ ..++++++
T Consensus 256 ~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 256 IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLL 296 (373)
T ss_dssp HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHH
Confidence 4888999999999999998888886211 45666665
No 350
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=33.54 E-value=97 Score=26.34 Aligned_cols=65 Identities=14% Similarity=0.073 Sum_probs=37.5
Q ss_pred CCChhHHHHHHHcCC--CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecc
Q psy2376 416 GQGGHSCKILERLGK--KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 416 G~Gghs~~ll~~~~~--~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG 485 (896)
|.|+=...+++.+-. ..+|+++|++++..+..+ ..++..+..+..+-+.+-+.. .++|.++.-.|
T Consensus 12 G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~~~ 78 (118)
T 3ic5_A 12 GAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKAL--GGFDAVISAAP 78 (118)
T ss_dssp CCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHT--TTCSEEEECSC
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHH--cCCCEEEECCC
Confidence 445444444333311 258999999998876654 234566666665544333222 25888886664
No 351
>2duy_A Competence protein comea-related protein; helix-hairpin-helix, structural genomics, NPPSFA; 1.75A {Thermus thermophilus} SCOP: a.60.2.7
Probab=33.44 E-value=9.8 Score=31.02 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=28.1
Q ss_pred HhccCHHHHHHHHHHhcCcccHHHHHHHHHHHhccCCCcchHHHHH
Q psy2376 522 LANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 567 (896)
Q Consensus 522 ~~~~~~~~l~~i~~~yg~~~~~~~~a~~i~~~r~~~~~~~t~~l~~ 567 (896)
+|+.+.++|.+| ..-..+.|++|++.| |+.+..||.+
T Consensus 21 iN~a~~~~L~~i------pGIG~~~A~~Il~~r---~~~s~~eL~~ 57 (75)
T 2duy_A 21 LNEASLEELMAL------PGIGPVLARRIVEGR---PYARVEDLLK 57 (75)
T ss_dssp TTTCCHHHHTTS------TTCCHHHHHHHHHTC---CCSSGGGGGG
T ss_pred hhhCCHHHHHhC------CCCCHHHHHHHHHHc---ccCCHHHHHh
Confidence 477788888776 224567899999998 7888888875
No 352
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=33.31 E-value=68 Score=31.94 Aligned_cols=74 Identities=9% Similarity=0.004 Sum_probs=48.9
Q ss_pred ccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEecccC
Q psy2376 414 TFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGIS 487 (896)
Q Consensus 414 T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~s 487 (896)
|=|+||=-+++.+++. .+.+|+..|++++.++...+....++.++..+.++ +.+.+++. ..+++|.++-+-|++
T Consensus 9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 88 (235)
T 3l6e_A 9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTG 88 (235)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCC
Confidence 5566776666666552 24699999999998876654334468888777654 33333221 113699999999975
No 353
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=32.93 E-value=47 Score=29.54 Aligned_cols=37 Identities=11% Similarity=0.141 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEe
Q psy2376 843 NLLTDAINEGVTAYISGEISESTVYISRESGVAYFAA 879 (896)
Q Consensus 843 ~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~ 879 (896)
...+...+.|||++|||.+.........+.|+.++..
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~ 90 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGRRAIEYFNSLGISVVTG 90 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCHHHHHHHHHTTCEEECS
T ss_pred HHHHHHHHcCCCEEEECCCCHhHHHHHHHCCCEEEEC
Confidence 4555556789999999999998887778899999875
No 354
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=32.53 E-value=18 Score=37.47 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=24.1
Q ss_pred HhhhHHHHHHHHHHHHhccccCceEEEE
Q psy2376 594 INQELKNLSIALKIGFKKLNIKGRIVVI 621 (896)
Q Consensus 594 vn~el~~l~~~l~~~~~~l~~~g~~~vi 621 (896)
+..++..++++|+.+.++|||||++++.
T Consensus 187 ~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 187 VSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3455678899999999999999999987
No 355
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=32.17 E-value=42 Score=32.75 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=23.2
Q ss_pred HHHHHHhccccCceEEEEeecchhHHHHHHHHhh
Q psy2376 604 ALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF 637 (896)
Q Consensus 604 ~l~~~~~~l~~~g~~~visfhsledr~vk~~~~~ 637 (896)
.++.+.++|+|||++++.+..--.-.-+.+.+++
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 169 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAVTLESETLLTQLHAR 169 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHh
Confidence 7888899999999998766543222334455554
No 356
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=32.16 E-value=19 Score=36.92 Aligned_cols=24 Identities=13% Similarity=-0.039 Sum_probs=20.9
Q ss_pred HHHHHHHHHhccccCceEEEEeec
Q psy2376 601 LSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~visfh 624 (896)
.+..++.+.++|||||+++++++.
T Consensus 170 ~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 170 HDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEEEe
Confidence 456788999999999999988876
No 357
>3euj_B Chromosome partition protein MUKF; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_E*
Probab=31.17 E-value=45 Score=30.34 Aligned_cols=81 Identities=21% Similarity=0.391 Sum_probs=36.9
Q ss_pred CCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHhcC--cccHHHHHHHHHHHhc-cCCCcchHHHHHHHHhhccCCCCC
Q psy2376 503 DGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGE--ERFAKKIAKEIVHYRS-ITPITRTKQLVEIILKSIRGNKRY 579 (896)
Q Consensus 503 ~~~ldmrm~~~~~~~a~~~~~~~~~~~l~~i~~~yg~--~~~~~~~a~~i~~~r~-~~~~~~t~~l~~~~~~~~~~~~~~ 579 (896)
+.-|||| |.+.-+.-.|+.-.++.+= =|.++-+ |..+.+|.......|+ ..|| +|..+.++-. .
T Consensus 31 eRL~DlR-DEel~Lr~eEvtGelP~el---Eyee~~~i~eql~~~i~~~L~~y~~~~~pl----dLg~VLrdyL-----~ 97 (152)
T 3euj_B 31 EALLDLR-DDEAMLNEMEAVGELPMAL---EYESLTDVQTQIVTAIQAELAHFRNTAQPI----NLGAVLQEQL-----A 97 (152)
T ss_dssp ------------------------------------CCCHHHHHHHHHHHHHHHHSSCCB----CHHHHHHHHT-----T
T ss_pred HHHhhhh-HHHHhhhhhhhhcCCchhh---hHHHHHHHHHHHHHHHHHHHHHHHHcCCCc----cHHHHHHHHH-----H
Confidence 4467999 5555566667766665431 1122222 4568888888888886 4565 6777776655 2
Q ss_pred CChhhHHHHHHHHHHhh
Q psy2376 580 KNPATRTFQAIRIYINQ 596 (896)
Q Consensus 580 ~~~~~~~fqalri~vn~ 596 (896)
+||.+|-|--=||-|.+
T Consensus 98 ~yP~~~HFDvARivVDQ 114 (152)
T 3euj_B 98 RYPQSRHFDVARIIVDQ 114 (152)
T ss_dssp TSCGGGHHHHHHHHHHH
T ss_pred hCcHhhhhhHHHHHHHH
Confidence 48999999999998875
No 358
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=31.14 E-value=27 Score=35.41 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=27.0
Q ss_pred HHHHHHHHHhccccCceEEEEeecchhHHHHHHHHh
Q psy2376 601 LSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 636 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~ 636 (896)
.+.+|+++.++|||||++++..+..-++.....+++
T Consensus 119 ~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 154 (260)
T 1vl5_A 119 PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYN 154 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHH
Confidence 457788999999999999998776655555544444
No 359
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=31.05 E-value=38 Score=34.45 Aligned_cols=38 Identities=11% Similarity=0.137 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHh
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 636 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~ 636 (896)
...++.+++.+.++|+|||+++++.-..-.+.+.+ .++
T Consensus 152 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~l~ 189 (259)
T 3lpm_A 152 MCTLEDTIRVAASLLKQGGKANFVHRPERLLDIID-IMR 189 (259)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHH-HHH
T ss_pred cCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHH-HHH
Confidence 35677889999999999999998754333344433 344
No 360
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=30.76 E-value=83 Score=29.66 Aligned_cols=75 Identities=13% Similarity=0.201 Sum_probs=46.4
Q ss_pred CcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH-HHHHHhcCCCcccEEEEecc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~d~il~dlG 485 (896)
.+-+.|.-+|||--=-.+-|.+ |+.+++.||+.-.+...+.. +-=.++.++.++. +..+..+|. ++..+=+|+|
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~hp~~~P---~~e~~ilGdi~~tL~~~~~r~g~-~a~LaHaD~G 115 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHV-QGREIYVFERAVASHPDSTP---PEAQLILGDIRETLPATLERFGA-TASLVHADLG 115 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCCCGGGCC---CGGGEEESCHHHHHHHHHHHHCS-CEEEEEECCC
T ss_pred CCceEEecCCCChhHHHHHHhC-CCCcEEEEEeeeccCCCCCC---chHheecccHHHHHHHHHHhcCC-ceEEEEeecC
Confidence 5788899999999888899998 56799999998665433211 1123444554432 322333433 2555555655
Q ss_pred c
Q psy2376 486 I 486 (896)
Q Consensus 486 ~ 486 (896)
-
T Consensus 116 ~ 116 (174)
T 3iht_A 116 G 116 (174)
T ss_dssp C
T ss_pred C
Confidence 3
No 361
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=30.53 E-value=88 Score=32.08 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=50.9
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++.. ..+|+..|++++..+...+....++.++..+..+ +.+.+++. ..+++|.++-+-|+
T Consensus 32 VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 32 VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGF 111 (277)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 466777777777666532 4599999999988776644346678888777655 33333221 12369999999997
Q ss_pred Cc
Q psy2376 487 SS 488 (896)
Q Consensus 487 ss 488 (896)
+.
T Consensus 112 ~~ 113 (277)
T 4dqx_A 112 GT 113 (277)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 362
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=30.32 E-value=84 Score=32.23 Aligned_cols=74 Identities=19% Similarity=0.207 Sum_probs=51.0
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHH---HHH----HhcCCCcccEEEEec
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD---IIL----KKYNIKKIDGILFDL 484 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~---~~l----~~~~~~~~d~il~dl 484 (896)
.|=|+||=-+++.+++.. ..+|+..|++++.++...+....++.++..+.++.+ +.+ +++ +++|.++-+-
T Consensus 10 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iD~lvnnA 87 (281)
T 3zv4_A 10 ITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF--GKIDTLIPNA 87 (281)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEECCC
T ss_pred EECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc--CCCCEEEECC
Confidence 366677766666666532 469999999999887665444677888887766533 333 333 3799999999
Q ss_pred ccCc
Q psy2376 485 GISS 488 (896)
Q Consensus 485 G~ss 488 (896)
|+..
T Consensus 88 g~~~ 91 (281)
T 3zv4_A 88 GIWD 91 (281)
T ss_dssp CCCC
T ss_pred CcCc
Confidence 9853
No 363
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=30.18 E-value=1.1e+02 Score=30.80 Aligned_cols=75 Identities=12% Similarity=0.030 Sum_probs=49.7
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH---HHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL---DIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-.++.+++-. +.+|+..|++++..+...+....++.++..+..+- .+.+++. ..+++|.++-+=|+
T Consensus 13 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 13 ITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCC
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 366677766666665422 45899999999987766544456788887776543 3333221 12379999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
+
T Consensus 93 ~ 93 (259)
T 4e6p_A 93 F 93 (259)
T ss_dssp C
T ss_pred C
Confidence 5
No 364
>2i5h_A Hypothetical protein AF1531; PFAM:DUF655, PSI-2, structural genomics, protein structure initiative; 1.74A {Archaeoglobus fulgidus} SCOP: e.71.1.1
Probab=30.09 E-value=28 Score=34.18 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhccCCCcchHHHHH
Q psy2376 543 AKKIAKEIVHYRSITPITRTKQLVE 567 (896)
Q Consensus 543 ~~~~a~~i~~~r~~~~~~~t~~l~~ 567 (896)
..+.|++|++.|+++||++..||.+
T Consensus 141 G~k~A~~IIeyRe~G~F~s~eDL~~ 165 (205)
T 2i5h_A 141 GKKMMWAIIEERKKRPFESFEDIAQ 165 (205)
T ss_dssp CHHHHHHHHHHHHHSCCCSHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 4688999999999999999999976
No 365
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=29.79 E-value=32 Score=36.25 Aligned_cols=28 Identities=7% Similarity=0.179 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecch
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHSL 626 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhsl 626 (896)
...++.++.+.+.||||||+++-..|.+
T Consensus 199 ~d~~~~l~el~r~LkPGG~Lvv~~~~~~ 226 (298)
T 3fpf_A 199 EPKRRVFRNIHRYVDTETRIIYRTYTGM 226 (298)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEEEECCGG
T ss_pred cCHHHHHHHHHHHcCCCcEEEEEcCcch
Confidence 3556778999999999999999876544
No 366
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=29.69 E-value=29 Score=36.10 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecchhHH
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHSLEDR 629 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhsledr 629 (896)
+.++++++.+.++|||||++++.++..-+++
T Consensus 160 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 190 (302)
T 3hem_A 160 ERYDTFFKKFYNLTPDDGRMLLHTITIPDKE 190 (302)
T ss_dssp THHHHHHHHHHHSSCTTCEEEEEEEECCCHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEEEeccCcc
Confidence 4567889999999999999999887655443
No 367
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=29.17 E-value=27 Score=35.70 Aligned_cols=25 Identities=24% Similarity=0.112 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhccccCceEEEEe
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVIS 622 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~vis 622 (896)
++.+++.|+++.++|||||++++..
T Consensus 173 ~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 173 LDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4677889999999999999999875
No 368
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=29.02 E-value=98 Score=32.88 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=47.0
Q ss_pred cEEEEEccCCChhHHHHHHHcCC-CcEE-EEEeCCHHHHHHhhcccCCCeEEEccChhcHH-HHHHhcCCCcccEEEEe
Q psy2376 408 GIYIDATFGQGGHSCKILERLGK-KGRL-IAIDKDTESVSLGNKITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFD 483 (896)
Q Consensus 408 ~~~vD~T~G~Gghs~~ll~~~~~-~~~~-~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~d~il~d 483 (896)
-.++|.-.|.||-+..+-+. +- --.+ .|+|+|+.|.+.-+..+.+. .++.+-.+++ +.+.+. ++|.++..
T Consensus 11 ~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~~--~~~~DI~~~~~~~i~~~---~~Dil~gg 83 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKEE--VQVKNLDSISIKQIESL---NCNTWFMS 83 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCCC--CBCCCTTTCCHHHHHHT---CCCEEEEC
T ss_pred CEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCCC--cccCChhhcCHHHhccC---CCCEEEec
Confidence 47899999999999998775 31 1356 79999999998776654333 4455554442 223221 47887764
No 369
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=28.95 E-value=27 Score=34.09 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhccccCceEEEEeecc
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.+.++++|+.+.++|+|||++++.+.+.
T Consensus 130 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 130 MTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 3566788999999999999999887654
No 370
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=28.81 E-value=2.1e+02 Score=27.60 Aligned_cols=120 Identities=13% Similarity=-0.038 Sum_probs=65.7
Q ss_pred HHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeEEE-ecCCCCCCCCCcHHHHHHHHcCCCccccCcc
Q psy2376 705 LIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYA-YHLPLDMHPKLGNNAQLAKILNFSCTRRFSK 783 (896)
Q Consensus 705 vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~-~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~ 783 (896)
.+++|.+.|+|.|+.|--.. .....+.++.+.++|+.+.. ++++.+... .- ..+..+|..-.. ..
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~--------~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~---~~-~~~~~~g~d~i~-v~- 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTD--------VLTIQSCIRAAKEAGKQVVVDMICVDDLPA---RV-RLLEEAGADMLA-VH- 134 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSC--------HHHHHHHHHHHHHHTCEEEEECTTCSSHHH---HH-HHHHHHTCCEEE-EE-
T ss_pred HHHHHHhcCCCEEEEeCCCC--------hhHHHHHHHHHHHcCCeEEEEecCCCCHHH---HH-HHHHHcCCCEEE-Ec-
Confidence 48999999999999985320 11235677788888988765 355432110 01 122233432211 10
Q ss_pred CcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEccC
Q psy2376 784 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI 861 (896)
Q Consensus 784 ~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd~ 861 (896)
.|.-|.- + .+.+ .+.++++++.++ + + .|.+.+|=..+-++++.+.|+|.++.|--
T Consensus 135 --~g~~g~~-------~-~~~~-~~~i~~l~~~~~---------~--~-~i~~~gGI~~~~~~~~~~~Gad~vvvGsa 189 (211)
T 3f4w_A 135 --TGTDQQA-------A-GRKP-IDDLITMLKVRR---------K--A-RIAVAGGISSQTVKDYALLGPDVVIVGSA 189 (211)
T ss_dssp --CCHHHHH-------T-TCCS-HHHHHHHHHHCS---------S--C-EEEEESSCCTTTHHHHHTTCCSEEEECHH
T ss_pred --CCCcccc-------c-CCCC-HHHHHHHHHHcC---------C--C-cEEEECCCCHHHHHHHHHcCCCEEEECHH
Confidence 1111110 1 1223 356667777652 1 1 23344444456677888899999999953
No 371
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=28.58 E-value=60 Score=35.91 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHhhcCCCCCCCCCCCccccCCcccchhhccccccccccccccccc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDY 679 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~e~w 679 (896)
.+++.|....+.||||||+++.-+ .+|.+.++......+... +-.+++....+..-+|
T Consensus 266 dl~~aL~Ei~RvLKPGGrIVssE~-------------------f~p~d~~i~~rnl~di~~---il~v~el~~~~~sVSW 323 (438)
T 3uwp_A 266 EVDHQLKERFANMKEGGRIVSSKP-------------------FAPLNFRINSRNLSDIGT---IMRVVELSPLKGSVSW 323 (438)
T ss_dssp HHHHHHHHHHTTSCTTCEEEESSC-------------------SSCTTCCCCSSSTTSGGG---SEEEEECCCCTTCCCT
T ss_pred hHHHHHHHHHHcCCCCcEEEEeec-------------------ccCCCCCCCcccccChhh---hheeeeccCCCCceee
Confidence 455566677789999999986522 223333332222222233 3366777777788888
Q ss_pred CCceeeeccCCCcceEEEEeecC
Q psy2376 680 CPNGLQVEGRSNINVIVTGVTAS 702 (896)
Q Consensus 680 d~~Gl~~~~~~~v~~i~~~~~~t 702 (896)
..++-.. -+..+|-+
T Consensus 324 T~~~g~y--------yi~tvdr~ 338 (438)
T 3uwp_A 324 TGKPVSY--------YLHTIDRT 338 (438)
T ss_dssp TSSCCCC--------EEEEECTH
T ss_pred ccCCccE--------EEEEechH
Confidence 8766444 25555655
No 372
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=28.56 E-value=1.2e+02 Score=32.16 Aligned_cols=72 Identities=21% Similarity=0.272 Sum_probs=47.8
Q ss_pred EEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHH-HHHHhcCCCcccEEEEec
Q psy2376 409 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDL 484 (896)
Q Consensus 409 ~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~d~il~dl 484 (896)
.++|.-.|.||-+..+-+.--+.-.|.++|+|+.|.+.-+..+.+ ..+++.+-.+++ +.+.+. ++|.++...
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-~~~~~~DI~~~~~~~~~~~---~~D~l~ggp 77 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-TNLLNRNIQQLTPQVIKKW---NVDTILMSP 77 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-SCEECCCGGGCCHHHHHHT---TCCEEEECC
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-CceeccccccCCHHHhccC---CCCEEEecC
Confidence 589999999999999987621123588999999999877654432 334555555542 223322 478776543
No 373
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=28.48 E-value=58 Score=29.79 Aligned_cols=38 Identities=13% Similarity=0.111 Sum_probs=29.5
Q ss_pred HHHHHHHHcCCcEEEEccCCchHHHHHHHcCCeEEEeC
Q psy2376 843 NLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAG 880 (896)
Q Consensus 843 ~~i~~a~~~g~D~~ITGd~~~h~~~~a~~~g~~li~~g 880 (896)
...+...+.|||++|||.+.......-.+.|+.++...
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~~a~~~L~~~GI~v~~~~ 104 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGRRAIAAFEAMGVKVIKGA 104 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCHHHHHHHHHTTCEEECSC
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCEEEecC
Confidence 45555566899999999998888777778898888753
No 374
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=28.36 E-value=27 Score=35.31 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=24.1
Q ss_pred hhhHHHHHHHHHHHHhccccCceEEEEe
Q psy2376 595 NQELKNLSIALKIGFKKLNIKGRIVVIS 622 (896)
Q Consensus 595 n~el~~l~~~l~~~~~~l~~~g~~~vis 622 (896)
..++...+.+|+++.++|||||++++..
T Consensus 171 ~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 171 CPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp CSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 3356788899999999999999999876
No 375
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=28.32 E-value=29 Score=34.20 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhccccCceEEEEeecc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
..+++|+.+.++|+|||++++.+++.
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 119 ERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 34577888999999999999998865
No 376
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=28.32 E-value=91 Score=31.43 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=50.4
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHH---HHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++. ...+|+..|++++.++...+....++.++..+.++.++ .+++. ..+++|.++-+=|+
T Consensus 13 VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 13 VIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGV 92 (255)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 36667776666666653 24599999999998876654445678888877765433 32221 12379999999887
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
+
T Consensus 93 ~ 93 (255)
T 4eso_A 93 S 93 (255)
T ss_dssp C
T ss_pred C
Confidence 5
No 377
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=28.24 E-value=31 Score=35.96 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=25.1
Q ss_pred HHHhhhHHHHHHHHHHHHhccccCceEEEE
Q psy2376 592 IYINQELKNLSIALKIGFKKLNIKGRIVVI 621 (896)
Q Consensus 592 i~vn~el~~l~~~l~~~~~~l~~~g~~~vi 621 (896)
+..|..-+.++++++.+.++|+|||++++-
T Consensus 190 ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 190 VHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 345666678899999999999999999874
No 378
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=28.22 E-value=38 Score=36.25 Aligned_cols=40 Identities=15% Similarity=0.290 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhccccCceEEEEeecchh-HHHHHHHHhh
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVISFHSLE-DRIVKNFINF 637 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~visfhsle-dr~vk~~~~~ 637 (896)
.+..+++++.+.++|+|||+++++.-+.+. +...++.|..
T Consensus 279 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~ 319 (343)
T 2pjd_A 279 LDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF 319 (343)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc
Confidence 356788999999999999999998755443 3455666654
No 379
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=28.06 E-value=1e+02 Score=31.78 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=53.6
Q ss_pred CcEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHH----HHhcCCCccc
Q psy2376 407 NGIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDII----LKKYNIKKID 478 (896)
Q Consensus 407 ~~~~vD~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~----l~~~~~~~~d 478 (896)
|++++ .|=|.+|=-+++.+++.. .++|+..|++++.++.+.+....+...+..+-.+ +++. .+++| ++|
T Consensus 29 gKval-VTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iD 105 (273)
T 4fgs_A 29 AKIAV-ITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG--RID 105 (273)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--CEE
T ss_pred CCEEE-EeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence 44433 477788887888777643 4699999999999987754445667766665443 3333 34444 799
Q ss_pred EEEEecccC
Q psy2376 479 GILFDLGIS 487 (896)
Q Consensus 479 ~il~dlG~s 487 (896)
..+-|=|+.
T Consensus 106 iLVNNAG~~ 114 (273)
T 4fgs_A 106 VLFVNAGGG 114 (273)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999874
No 380
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=28.01 E-value=90 Score=31.08 Aligned_cols=71 Identities=15% Similarity=0.248 Sum_probs=49.3
Q ss_pred EccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHH------HHHhcCCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI------ILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~~~~~d~il~dlG~ 486 (896)
.|=|+||=-.++.+++..+++|++.|++++..+...+ ..++.++..+..+-.. .+++ .+++|.++-+-|+
T Consensus 10 ITGas~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~id~lv~~Ag~ 85 (245)
T 3e9n_A 10 VTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKN--LDHVDTLVHAAAV 85 (245)
T ss_dssp EESTTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTT--CSCCSEEEECC--
T ss_pred EEcCCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh--hcCCcceecccchHHHHHHHHHHHHh--cCCCCEEEECCCc
Confidence 4778888888888888777899999999998876654 2467777776654432 1122 2478999999887
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 86 ~ 86 (245)
T 3e9n_A 86 A 86 (245)
T ss_dssp -
T ss_pred C
Confidence 5
No 381
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=27.93 E-value=1.1e+02 Score=30.80 Aligned_cols=75 Identities=12% Similarity=0.151 Sum_probs=50.1
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHH---HHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD---IILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-.++.+++. ...+|+..|++++.++...+....++.++..+..+.+ +.+++. ..+++|.++-+-|+
T Consensus 14 ITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 14 ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGI 93 (261)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence 36566666666666543 2458999999999887765444677888887776533 333221 12369999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 94 ~ 94 (261)
T 3n74_A 94 G 94 (261)
T ss_dssp C
T ss_pred C
Confidence 6
No 382
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=27.79 E-value=31 Score=29.64 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=23.9
Q ss_pred HHHhccCHHHHHHHHHHhcCcccHHHHH
Q psy2376 520 KWLANATEFNIKKVIQDYGEERFAKKIA 547 (896)
Q Consensus 520 ~~~~~~~~~~l~~i~~~yg~~~~~~~~a 547 (896)
+.|..-+++...++..+||||.-||||+
T Consensus 67 ~~Lqk~D~~~R~qL~~KfG~enVAkRi~ 94 (111)
T 3k6g_A 67 IDLQKDDEDTREALVKKFGAQNVARRIE 94 (111)
T ss_dssp HHHTCCCHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHhhHHHHHHHH
Confidence 5678889999999999999998777765
No 383
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=27.78 E-value=40 Score=35.32 Aligned_cols=34 Identities=12% Similarity=0.223 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhccccCceEEEEeecchhHHHHHH
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKN 633 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~ 633 (896)
++..+.+|+++.++|+|||++++.++.+ |.+.+.
T Consensus 131 ~~~~~~~l~~~~~~LkpgG~li~~~~~~--~~l~~~ 164 (313)
T 3bgv_A 131 YEQADMMLRNACERLSPGGYFIGTTPNS--FELIRR 164 (313)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEEECH--HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEecCCh--HHHHHH
Confidence 4567788999999999999999988887 444443
No 384
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.59 E-value=1.2e+02 Score=30.76 Aligned_cols=75 Identities=11% Similarity=0.224 Sum_probs=48.8
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH---HHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL---DIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++.. ..+|+..|++++.++...+....++.++..+.++- .+.+++. ..+++|.++-+-|+
T Consensus 11 ITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~ 90 (263)
T 2a4k_A 11 VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90 (263)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGG
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence 365667766666665432 45899999999887765443346778777766543 3333221 12368999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 91 ~ 91 (263)
T 2a4k_A 91 A 91 (263)
T ss_dssp T
T ss_pred C
Confidence 5
No 385
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=27.31 E-value=1.1e+02 Score=26.84 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=42.0
Q ss_pred CCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecc
Q psy2376 416 GQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 416 G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG 485 (896)
|.|.-...+++.+.. +.+|..+|++++..+..++.. .+..+.++..+.+. +.+.+..+.|.++.-.+
T Consensus 11 G~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~-l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 11 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKT-LEDAGIEDADMYIAVTG 78 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHH-HHHTTTTTCSEEEECCS
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHH-HHHcCcccCCEEEEeeC
Confidence 777766666655422 347999999998776554321 35566666655443 44445557898887653
No 386
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=27.21 E-value=99 Score=30.95 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=50.5
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++. ...+|+..|++++..+...+....++..+..+.++ +.+.+++. ..+++|.++-+-|+
T Consensus 11 VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 11 VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90 (247)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
Confidence 36667776666666653 24699999999998876644346778888877665 33333321 12369999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 91 ~ 91 (247)
T 3rwb_A 91 V 91 (247)
T ss_dssp C
T ss_pred C
Confidence 5
No 387
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=27.18 E-value=29 Score=33.74 Aligned_cols=26 Identities=4% Similarity=-0.011 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhccccCceEEEEeecc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.++.+|+.+.++|+|||++++.+++.
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 46777999999999999999998876
No 388
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.90 E-value=2.9e+02 Score=28.31 Aligned_cols=121 Identities=14% Similarity=0.090 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHcCCCccccCcc
Q psy2376 704 DLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSK 783 (896)
Q Consensus 704 ~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~~~ 783 (896)
.-+++|.+.|+|-+|.|- +-++ ...+....+.++|+.....=+|=. ..+.+.+.......-....
T Consensus 114 ~f~~~~~~aGvdgvii~D-lp~e--------e~~~~~~~~~~~gl~~i~liaP~t------~~eri~~i~~~~~gfvY~v 178 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIAD-VPVE--------ESAPFSKAAKAHGIAPIFIAPPNA------DADTLKMVSEQGEGYTYLL 178 (267)
T ss_dssp HHHHHHHHHTCCEEEETT-SCGG--------GCHHHHHHHHHTTCEEECEECTTC------CHHHHHHHHHHCCSCEEES
T ss_pred HHHHHHHHcCCCEEEeCC-CCHh--------hHHHHHHHHHHcCCeEEEEECCCC------CHHHHHHHHHhCCCcEEEE
Confidence 468999999999999873 2111 135677888999987442222111 1122222222111000000
Q ss_pred CcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCc---hHHHHHHHHcCCcEEEEcc
Q psy2376 784 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA---QNLLTDAINEGVTAYISGE 860 (896)
Q Consensus 784 ~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg---~~~i~~a~~~g~D~~ITGd 860 (896)
...|.-|.- -..+..+.++++++++..+.| |+ .|+| .+-++++.+.|||.+|.|-
T Consensus 179 S~~GvTG~~-------~~~~~~~~~~v~~vr~~~~~p-------------v~--vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 179 SRAGVTGTE-------SKAGEPIENILTQLAEFNAPP-------------PL--LGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp CCCCCC---------------CHHHHHHHHHTTTCCC-------------EE--ECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred ecCCCCCCc-------cCCcHHHHHHHHHHHHhcCCC-------------EE--EECCcCCHHHHHHHHHcCCCEEEECH
Confidence 111222321 011345788888888754322 22 2454 3566667789999999996
Q ss_pred C
Q psy2376 861 I 861 (896)
Q Consensus 861 ~ 861 (896)
.
T Consensus 237 a 237 (267)
T 3vnd_A 237 A 237 (267)
T ss_dssp H
T ss_pred H
Confidence 4
No 389
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=26.85 E-value=28 Score=36.13 Aligned_cols=25 Identities=16% Similarity=0.324 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhccccCceEEEEeec
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
..+++|+.+.++|||||+++++.++
T Consensus 150 d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 150 DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 3567788999999999999988654
No 390
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=26.69 E-value=1.1e+02 Score=31.23 Aligned_cols=75 Identities=8% Similarity=0.069 Sum_probs=50.8
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++. .+.+|+..|++++.++...+....++.++..+.++ +.+.+++. ..+++|.++-+-|+
T Consensus 33 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 33 VTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGT 112 (272)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 47677777677666653 24689999999998877654445678888777654 33333321 12379999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 113 ~ 113 (272)
T 4dyv_A 113 G 113 (272)
T ss_dssp C
T ss_pred C
Confidence 5
No 391
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.56 E-value=90 Score=29.52 Aligned_cols=66 Identities=14% Similarity=0.169 Sum_probs=42.9
Q ss_pred CCChhHHHHHHHcCC--CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhc-CCCcccEEEEecc
Q psy2376 416 GQGGHSCKILERLGK--KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY-NIKKIDGILFDLG 485 (896)
Q Consensus 416 G~Gghs~~ll~~~~~--~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~d~il~dlG 485 (896)
|.|.=...+++.+.. +.+|+++|+|++..+..++. .+..+.++..+.+ .+++. +..+.|.++.-.+
T Consensus 46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~---g~~~~~gd~~~~~-~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE---GRNVISGDATDPD-FWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT---TCCEEECCTTCHH-HHHTBCSCCCCCEEEECCS
T ss_pred CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC---CCCEEEcCCCCHH-HHHhccCCCCCCEEEEeCC
Confidence 666655555554422 24799999999988766542 3556666665543 45565 6677899887555
No 392
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=26.41 E-value=37 Score=38.15 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=29.1
Q ss_pred HHHHHHHHhccccCceEEE--EeecchhHH-HHHHHHhhc
Q psy2376 602 SIALKIGFKKLNIKGRIVV--ISFHSLEDR-IVKNFINFN 638 (896)
Q Consensus 602 ~~~l~~~~~~l~~~g~~~v--isfhsledr-~vk~~~~~~ 638 (896)
++.|+.+.++|||||+++. -|+|.-|+. .|+.++++.
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 6789999999999999986 467888765 556666654
No 393
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=26.35 E-value=1.1e+02 Score=27.66 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHhHhCCCcEEEc-CCCCceeEEEEEecCchHHHHHHHHcCCcEEEE-ccCCchHHHHHHH-cCC-eEEEe
Q psy2376 804 ITIKDLFHHITRKIGKKPIVIG-DLNKKIYEIGWCTGAAQNLLTDAINEGVTAYIS-GEISESTVYISRE-SGV-AYFAA 879 (896)
Q Consensus 804 ~~~~el~~~~~~~l~~~~~~~g-~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~IT-Gd~~~h~~~~a~~-~g~-~li~~ 879 (896)
+++.|+++ .++.+.+ .| +.++.|+++-+++=.-.++++......-.+.|| ||-. .....|.+ .++ ++|..
T Consensus 8 ~tv~~i~~----~l~~~vl-~g~~~~~~i~~i~~~a~~~~~~~~~~~~~~~~l~I~~G~r~-~~~l~a~~~~~~~~iIlt 81 (139)
T 2ioj_A 8 LSVEEIRE----AVSGEYL-IEPREEKMVEQVVIGAMSPQSALRYLREARNAALVTGGDRS-DLLLTALEMPNVRCLILT 81 (139)
T ss_dssp EEHHHHHH----HTTCEEE-ECCSSCCEECEEEECSSCHHHHHHHHHTCSSEEEEEETTCH-HHHHHHTTCTTEEEEEEE
T ss_pred CCHHHHHH----HcCCEEE-EcCCCCeEEeeEEEEeCCHHHHHHHHhcCCCEEEEEcCCHH-HHHHHHHhCCCCcEEEEc
Confidence 56777664 5665533 34 225667766554333345665544321247777 6654 33344444 343 33444
Q ss_pred CCh
Q psy2376 880 GHH 882 (896)
Q Consensus 880 gH~ 882 (896)
|.+
T Consensus 82 ~g~ 84 (139)
T 2ioj_A 82 GNL 84 (139)
T ss_dssp TTC
T ss_pred CCC
Confidence 443
No 394
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=26.06 E-value=78 Score=29.12 Aligned_cols=69 Identities=17% Similarity=0.120 Sum_probs=43.3
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEeccc
Q psy2376 415 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ 486 (896)
+|.|.=...+++.+.. +.+|+++|++++..+..++ ......+.++..+. +.+++.+..++|.++.=.|-
T Consensus 25 iG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~--~~g~~~~~~d~~~~-~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 25 FGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS--EFSGFTVVGDAAEF-ETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT--TCCSEEEESCTTSH-HHHHTTTGGGCSEEEECSSC
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh--cCCCcEEEecCCCH-HHHHHcCcccCCEEEEEeCC
Confidence 4777666666555422 3489999999987655431 22345666665553 34555555678988887764
No 395
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=26.04 E-value=66 Score=31.57 Aligned_cols=68 Identities=21% Similarity=0.192 Sum_probs=45.9
Q ss_pred cCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecc
Q psy2376 415 FGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 485 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG 485 (896)
+|.|.-...+++.+. .+..|..+|+|++..+...+. ..+.+++++..+-+ .+++.++.+.|.++.-.+
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~--~~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK--LKATIIHGDGSHKE-ILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH--SSSEEEESCTTSHH-HHHHHTCCTTCEEEECCS
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--cCCeEEEcCCCCHH-HHHhcCcccCCEEEEecC
Confidence 466666666666542 234799999999987764332 24677888877644 466667788999987543
No 396
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=25.78 E-value=29 Score=33.93 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhccccCceEEEEeecc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
..+.+|+.+.++|+|||++++.++|.
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 34567888899999999999988874
No 397
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=25.67 E-value=1.3e+02 Score=30.18 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=47.4
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-.++.+++- ...+|+..|++++..+...+...+++.++..+..+ +.+.+++. ..+++|.++-+-|+
T Consensus 17 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 96 (263)
T 3ak4_A 17 VTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGV 96 (263)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 46666666666666542 24589999999988766543333467777766654 33333321 01269999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 97 ~ 97 (263)
T 3ak4_A 97 S 97 (263)
T ss_dssp C
T ss_pred C
Confidence 5
No 398
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=25.60 E-value=18 Score=36.23 Aligned_cols=28 Identities=14% Similarity=0.233 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecch
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHSL 626 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhsl 626 (896)
...+.+++.+.++|||||+++++.+.+.
T Consensus 147 ~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 174 (236)
T 1zx0_A 147 HQFNFIKNHAFRLLKPGGVLTYCNLTSW 174 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEECCHHHH
T ss_pred hhHHHHHHHHHHhcCCCeEEEEEecCcH
Confidence 3456778999999999999998887654
No 399
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=25.47 E-value=1.3e+02 Score=30.21 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=45.6
Q ss_pred cCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhc-c---cCCCeEEEccChhcH---HHHHHhc--CCCcccEEEEecc
Q psy2376 415 FGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK-I---TDSRFSIIHNCFTEL---DIILKKY--NIKKIDGILFDLG 485 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~-~---~~~~~~~~~~~~~~~---~~~l~~~--~~~~~d~il~dlG 485 (896)
.|-|.+...-|-+. +.+|+..|++++..+...+ + ...++.++..+.++- .+.+++. ..+++|.++.+-|
T Consensus 33 ~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 33 TGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp SSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 34555554444433 4689999999988766543 2 236788888877653 3333321 1237999999999
Q ss_pred cCc
Q psy2376 486 ISS 488 (896)
Q Consensus 486 ~ss 488 (896)
++.
T Consensus 111 ~~~ 113 (266)
T 3o38_A 111 LGG 113 (266)
T ss_dssp CCC
T ss_pred cCC
Confidence 753
No 400
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=25.29 E-value=1.2e+02 Score=30.98 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=49.9
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcH---HHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL---DIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++- ...+|+..|++++..+...+....++.++..+..+- .+.+++. ..+++|.++-+=|+
T Consensus 34 VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 34 VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGV 113 (277)
T ss_dssp ETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 46677776666666542 246999999999988766543466788887776553 3333221 12369999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 114 ~ 114 (277)
T 3gvc_A 114 V 114 (277)
T ss_dssp C
T ss_pred C
Confidence 5
No 401
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.26 E-value=84 Score=31.02 Aligned_cols=76 Identities=22% Similarity=0.273 Sum_probs=50.1
Q ss_pred EccCCChhHHHHHHHcCCC---cEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHh----cCCCcccEEEE
Q psy2376 413 ATFGQGGHSCKILERLGKK---GRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKK----YNIKKIDGILF 482 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~~---~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~----~~~~~~d~il~ 482 (896)
.|=|.||=..++.+++-.. .+|+++|++++..+..++....++.++..+..+ +.+.+++ ++..++|.++.
T Consensus 8 ItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~ 87 (250)
T 1yo6_A 8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLIN 87 (250)
T ss_dssp ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEE
T ss_pred EecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 4667777777777766443 599999999887654433324578888877654 3333332 22126899999
Q ss_pred ecccCc
Q psy2376 483 DLGISS 488 (896)
Q Consensus 483 dlG~ss 488 (896)
+-|+..
T Consensus 88 ~Ag~~~ 93 (250)
T 1yo6_A 88 NAGVLL 93 (250)
T ss_dssp CCCCCC
T ss_pred CCcccC
Confidence 999764
No 402
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=25.23 E-value=33 Score=31.98 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=20.7
Q ss_pred HHHHHHHHHhccccCceEEEEeecc
Q psy2376 601 LSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.+.+++++.++|+|||++++..+..
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 4677888899999999999986543
No 403
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=25.22 E-value=39 Score=33.07 Aligned_cols=27 Identities=15% Similarity=0.111 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecc
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.+.+++++.+.++|+|||++++..++.
T Consensus 119 ~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 119 LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 456778999999999999999887753
No 404
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=25.10 E-value=44 Score=30.95 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=35.9
Q ss_pred CCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhccc--CCCeEE--EccChhcHHHHHHhcCCCcccEEEEecccC
Q psy2376 416 GQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSI--IHNCFTELDIILKKYNIKKIDGILFDLGIS 487 (896)
Q Consensus 416 G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~~~~~~d~il~dlG~s 487 (896)
|.+||+.+.-.-....-+|+-+|-|+...+.-++.+ ...+.. ...+..+.-+.+++. ++|.|+.|+..+
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~---~~dlvilD~~l~ 82 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIEL---KPDVITMDIEMP 82 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHH---CCSEEEECSSCS
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhccC---CCCEEEEeCCCC
Confidence 566777777766555679999999998877665532 223333 344555555555544 589999987643
No 405
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=25.06 E-value=1.1e+02 Score=30.57 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=48.1
Q ss_pred ccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEecccC
Q psy2376 414 TFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGIS 487 (896)
Q Consensus 414 T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~s 487 (896)
|=|.||=-+++.+++. .+.+|+..|++++.++...+....++.++..+..+ +.+.+++. ..+++|.++-+-|+.
T Consensus 6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 85 (248)
T 3asu_A 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLA 85 (248)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 4455555555555542 24689999999988766543334578887776654 45555443 134799999999975
No 406
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.93 E-value=97 Score=31.57 Aligned_cols=76 Identities=17% Similarity=0.161 Sum_probs=50.4
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|+||=-.++.+++- .+.+|++.|++++.++...+...++++++..+..+ +++.+++. ..+++|.++-+=|+
T Consensus 10 VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 10 VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGR 89 (281)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 46677776666666542 24589999999988766544446788888877655 33333321 11368999999887
Q ss_pred Cc
Q psy2376 487 SS 488 (896)
Q Consensus 487 ss 488 (896)
+.
T Consensus 90 ~~ 91 (281)
T 3m1a_A 90 TQ 91 (281)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 407
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=24.70 E-value=1.6e+02 Score=29.56 Aligned_cols=69 Identities=13% Similarity=0.134 Sum_probs=43.7
Q ss_pred hhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcc----cCCCeEEEccChhc---HH----HHHHhcCCCcccEEEEeccc
Q psy2376 419 GHSCKILERLG-KKGRLIAIDKDTESVSLGNKI----TDSRFSIIHNCFTE---LD----IILKKYNIKKIDGILFDLGI 486 (896)
Q Consensus 419 ghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~----~~~~~~~~~~~~~~---~~----~~l~~~~~~~~d~il~dlG~ 486 (896)
|=-+++.+++. ...+|+..|++++.++.+.+. ...+...+..+-++ +. +..+++| ++|+++-|-|+
T Consensus 19 GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iD~lvnnAg~ 96 (256)
T 4fs3_A 19 SIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG--NIDGVYHSIAF 96 (256)
T ss_dssp CHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHC--CCSEEEECCCC
T ss_pred hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhC--CCCEEEecccc
Confidence 34444444432 246999999999887766542 23467777766543 33 3334444 79999999998
Q ss_pred Ccc
Q psy2376 487 SSN 489 (896)
Q Consensus 487 ss~ 489 (896)
...
T Consensus 97 ~~~ 99 (256)
T 4fs3_A 97 ANM 99 (256)
T ss_dssp CCG
T ss_pred ccc
Confidence 643
No 408
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.62 E-value=2.4e+02 Score=31.40 Aligned_cols=88 Identities=14% Similarity=0.184 Sum_probs=64.4
Q ss_pred cchHHHhhhccccccccCcEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHH
Q psy2376 390 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIIL 469 (896)
Q Consensus 390 ~m~~e~l~~L~~~~~~~~~~~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l 469 (896)
.-.+++.+.+..+......++| .|+|.=...+++.+.++..|.-+|.|++--+...+.+ ++...+|++-.+.+ +|
T Consensus 219 ~~i~~~~~~~g~~~~~~~~v~I---~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-~~~~Vi~GD~td~~-~L 293 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPYRRIMI---VGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-ENTIVFCGDAADQE-LL 293 (461)
T ss_dssp TTHHHHHHHTTGGGSCCCEEEE---ECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-TTSEEEESCTTCHH-HH
T ss_pred chHHHHHHhhccccccccEEEE---EcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-CCceEEeccccchh-hH
Confidence 3456666666654322334543 7899999999999988889999999988665543333 46789999988765 67
Q ss_pred HhcCCCcccEEEE
Q psy2376 470 KKYNIKKIDGILF 482 (896)
Q Consensus 470 ~~~~~~~~d~il~ 482 (896)
++.|+...|.++.
T Consensus 294 ~ee~i~~~D~~ia 306 (461)
T 4g65_A 294 TEENIDQVDVFIA 306 (461)
T ss_dssp HHTTGGGCSEEEE
T ss_pred hhcCchhhcEEEE
Confidence 8889989999886
No 409
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=24.45 E-value=1.5e+02 Score=29.68 Aligned_cols=75 Identities=12% Similarity=0.184 Sum_probs=50.2
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcc---cCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEe
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKI---TDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFD 483 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~---~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~d 483 (896)
.|=|.||=-.++.+++-. ..+|+..|++++..+.+.+. ...++.++..+.++ +.+.+++. ..+++|.++-+
T Consensus 11 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 90 (257)
T 3imf_A 11 ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINN 90 (257)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 466777777776666532 46899999999988776432 34678888877665 33333321 12379999999
Q ss_pred cccC
Q psy2376 484 LGIS 487 (896)
Q Consensus 484 lG~s 487 (896)
-|+.
T Consensus 91 Ag~~ 94 (257)
T 3imf_A 91 AAGN 94 (257)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9865
No 410
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=24.34 E-value=36 Score=32.83 Aligned_cols=26 Identities=12% Similarity=0.032 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhccccCceEEEEeec
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
+..+++++.+.++|+|||++++..+.
T Consensus 105 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 105 NDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 45678899999999999999876553
No 411
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=24.32 E-value=28 Score=33.58 Aligned_cols=26 Identities=19% Similarity=0.107 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhccccCceEEEEeecc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
..+.+|+.+.++|+|||++++..++.
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 45677889999999999999876543
No 412
>3imo_A Integron cassette protein; novel, integron protein, argentinean O139 strain, unknown function; 1.80A {Vibrio cholerae O139}
Probab=24.30 E-value=11 Score=33.77 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=38.3
Q ss_pred CCCCCCccCCCC-CCccccCCCCCCCCHHHHHhccCHHHHHHHHHH
Q psy2376 492 NNELRGFSFLLD-GPLDMRMDITRGISASKWLANATEFNIKKVIQD 536 (896)
Q Consensus 492 ~~~~rgfs~~~~-~~ldmrm~~~~~~~a~~~~~~~~~~~l~~i~~~ 536 (896)
...+--|||.++ +..|||=+..+|-+-..+=|+-+..++..+|+.
T Consensus 87 ~gkRyaFsYNh~t~~IElR~gs~~Ga~l~SF~N~T~~~~I~~~F~s 132 (133)
T 3imo_A 87 NGERYAFSYNHSSEKIEMRKGNIQGNTIHEFDNSTPLSKLVEIFKG 132 (133)
T ss_dssp TTEEEEEEEETTTTEEEEEESSTTSCCSEEECTTSCHHHHHHHHHH
T ss_pred cCEEEEEEeccccceEEEecCcccceEEEEecCCCCHHHHHHHHhc
Confidence 344556999985 789999999999998889999999999999974
No 413
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=24.25 E-value=3.8e+02 Score=27.20 Aligned_cols=123 Identities=13% Similarity=0.106 Sum_probs=64.0
Q ss_pred HHHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHH-cCCCccccC
Q psy2376 703 LDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKI-LNFSCTRRF 781 (896)
Q Consensus 703 ~~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~la~~-Lgl~~~~~~ 781 (896)
.+-++++.+.|+|-++.|- +-. ....+.+..+.++|+.+...-++= ++. ---..+++. -|+- .
T Consensus 112 ~~~~~~~~~aGadgii~~d-~~~--------e~~~~~~~~~~~~g~~~i~l~~p~--t~~-~~i~~i~~~~~g~v----~ 175 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVAD-VPV--------EESAPFRQAALRHNIAPIFICPPN--ADD-DLLRQVASYGRGYT----Y 175 (268)
T ss_dssp HHHHHHHHHHTCCEEEETT-CCG--------GGCHHHHHHHHHTTCEEECEECTT--CCH-HHHHHHHHHCCSCE----E
T ss_pred HHHHHHHHHcCCCEEEEcC-CCH--------HHHHHHHHHHHHcCCcEEEEECCC--CCH-HHHHHHHhhCCCcE----E
Confidence 4578899999999888862 211 123567788889997643322111 110 011222222 1110 0
Q ss_pred ccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCc-hHHHHHHHHcCCcEEEEcc
Q psy2376 782 SKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA-QNLLTDAINEGVTAYISGE 860 (896)
Q Consensus 782 ~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg-~~~i~~a~~~g~D~~ITGd 860 (896)
.-...|.-|.- .+.+.+..++++++++..+. .|++-+|-. .+-+.++...|||.+|.|-
T Consensus 176 ~~s~~G~tG~~-------~~~~~~~~~~i~~lr~~~~~-------------pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 176 LLSRSGVTGAE-------NRGALPLHHLIEKLKEYHAA-------------PALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp EESSSSCCCSS-------SCC--CCHHHHHHHHHTTCC-------------CEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred EEecCCcCCCc-------cCCCchHHHHHHHHHhccCC-------------cEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 00011222321 11223456788888775421 244444443 5678887889999999995
Q ss_pred C
Q psy2376 861 I 861 (896)
Q Consensus 861 ~ 861 (896)
-
T Consensus 236 a 236 (268)
T 1qop_A 236 A 236 (268)
T ss_dssp H
T ss_pred H
Confidence 4
No 414
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=24.14 E-value=92 Score=32.77 Aligned_cols=64 Identities=19% Similarity=0.216 Sum_probs=44.5
Q ss_pred EEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEE
Q psy2376 410 YIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGIL 481 (896)
Q Consensus 410 ~vD~T~G~Gghs~~ll~~~~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il 481 (896)
+||.-.|.||=+..+-+. +- -.+.+.|+|+.|.+.-+..+.+ ++++++-.+++ ...++++|.++
T Consensus 3 vidLFsG~GG~~~G~~~a-G~-~~v~a~e~d~~a~~ty~~N~~~--~~~~~DI~~i~----~~~~~~~D~l~ 66 (331)
T 3ubt_Y 3 LISLFSGAGGLDLGFQKA-GF-RIICANEYDKSIWKTYESNHSA--KLIKGDISKIS----SDEFPKCDGII 66 (331)
T ss_dssp EEEESCTTCHHHHHHHHT-TC-EEEEEEECCTTTHHHHHHHCCS--EEEESCGGGCC----GGGSCCCSEEE
T ss_pred EEEeCcCccHHHHHHHHC-CC-EEEEEEeCCHHHHHHHHHHCCC--CcccCChhhCC----HhhCCcccEEE
Confidence 799999999999997654 43 3688999999999876654433 45555555443 12345688765
No 415
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=24.02 E-value=2.6e+02 Score=28.40 Aligned_cols=75 Identities=20% Similarity=0.174 Sum_probs=50.6
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhc-c--cCCCeEEEccChhcH---HHHHHhc--CCCcccEEEEe
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNK-I--TDSRFSIIHNCFTEL---DIILKKY--NIKKIDGILFD 483 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~-~--~~~~~~~~~~~~~~~---~~~l~~~--~~~~~d~il~d 483 (896)
.|=|.||=..++.+++-. ..+|+..|++++..+...+ + ...++.++..+..+- .+.+++. ..+++|.++-+
T Consensus 49 ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~ 128 (285)
T 2c07_A 49 VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNN 128 (285)
T ss_dssp EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred EECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 577788888888887754 4589999999887665432 2 245788887776653 3333221 12369999999
Q ss_pred cccC
Q psy2376 484 LGIS 487 (896)
Q Consensus 484 lG~s 487 (896)
-|+.
T Consensus 129 Ag~~ 132 (285)
T 2c07_A 129 AGIT 132 (285)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9975
No 416
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=24.00 E-value=1.4e+02 Score=29.76 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=49.9
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCeEEEccChhcHH---HHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD---IILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++.. ..+|+..|++++..+...+....++.++..+..+-+ +.+++. ..+++|.++-+-|+
T Consensus 11 VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 90 (253)
T 1hxh_A 11 VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI 90 (253)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCC
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 476777777777766533 458999999998776553323567888887776533 333221 11368999999997
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 91 ~ 91 (253)
T 1hxh_A 91 L 91 (253)
T ss_dssp C
T ss_pred C
Confidence 5
No 417
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=23.85 E-value=37 Score=35.26 Aligned_cols=27 Identities=11% Similarity=-0.039 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecc
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
+.++++|+.+.++|+|||++++-+++.
T Consensus 167 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 167 ADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 456778999999999999998877665
No 418
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=23.82 E-value=41 Score=33.48 Aligned_cols=25 Identities=24% Similarity=0.267 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhccccCceEEEEeec
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
.++.+++++.++|||||++++.+..
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 4567789999999999999987654
No 419
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=23.76 E-value=4.1e+02 Score=25.32 Aligned_cols=43 Identities=9% Similarity=-0.065 Sum_probs=28.7
Q ss_pred HHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeE-EEec
Q psy2376 704 DLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINL-YAYH 754 (896)
Q Consensus 704 ~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~v-y~~H 754 (896)
..++.|.+.|+|.|..|--. + .....+..+.+.++|+.+ .++|
T Consensus 68 ~~~~~a~~~Gad~v~vh~~~---~-----~~~~~~~~~~~~~~g~~~gv~~~ 111 (207)
T 3ajx_A 68 LEADIAFKAGADLVTVLGSA---D-----DSTIAGAVKAAQAHNKGVVVDLI 111 (207)
T ss_dssp HHHHHHHHTTCSEEEEETTS---C-----HHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHhCCCCEEEEeccC---C-----hHHHHHHHHHHHHcCCceEEEEe
Confidence 45899999999999988321 0 122345566677778776 4466
No 420
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=23.71 E-value=1.9e+02 Score=28.82 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=48.4
Q ss_pred ccCCChhHHHHHHHc---CCCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEecc
Q psy2376 414 TFGQGGHSCKILERL---GKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLG 485 (896)
Q Consensus 414 T~G~Gghs~~ll~~~---~~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG 485 (896)
|=|.||=-+++.+++ +.+.+|+..|++++.++...+....++.++..+.++ +.+.+++. ..+++|.++-|-|
T Consensus 8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg 87 (254)
T 3kzv_A 8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAG 87 (254)
T ss_dssp CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCc
Confidence 555666555555544 334699999999998876654445678888776654 33333321 1237999999999
Q ss_pred cC
Q psy2376 486 IS 487 (896)
Q Consensus 486 ~s 487 (896)
+.
T Consensus 88 ~~ 89 (254)
T 3kzv_A 88 VL 89 (254)
T ss_dssp CC
T ss_pred cc
Confidence 74
No 421
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=23.70 E-value=1.5e+02 Score=30.20 Aligned_cols=73 Identities=12% Similarity=0.202 Sum_probs=51.8
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhc-c--cCCCeEEEccChhc---HHHH----HHhcCCCcccEEE
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNK-I--TDSRFSIIHNCFTE---LDII----LKKYNIKKIDGIL 481 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~-~--~~~~~~~~~~~~~~---~~~~----l~~~~~~~~d~il 481 (896)
.|=|.+|=-+++.+++. ..++|+..|++++.++.+.+ + ...++..++.+-++ +++. .+++| ++|..+
T Consensus 12 VTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G--~iDiLV 89 (254)
T 4fn4_A 12 VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS--RIDVLC 89 (254)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS--CCCEEE
T ss_pred EeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence 37788888777777763 35799999999999877643 2 35678777766544 3333 34444 799999
Q ss_pred EecccC
Q psy2376 482 FDLGIS 487 (896)
Q Consensus 482 ~dlG~s 487 (896)
=|=|+.
T Consensus 90 NNAGi~ 95 (254)
T 4fn4_A 90 NNAGIM 95 (254)
T ss_dssp ECCCCC
T ss_pred ECCccc
Confidence 999874
No 422
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=23.69 E-value=35 Score=35.24 Aligned_cols=30 Identities=7% Similarity=0.025 Sum_probs=24.6
Q ss_pred HhhhHHHHHHHHHHHHhccccCceEEEEeecc
Q psy2376 594 INQELKNLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 594 vn~el~~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
+.+| +.+..|+++.+.|+|||++++..+..
T Consensus 170 ~~d~--~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 170 LSPD--VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCTT--THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCcH--HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3454 56677999999999999999988875
No 423
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=23.59 E-value=1.7e+02 Score=28.90 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEcc---CCCccCCCCccCChHHHHHHHHHHcCC-eEEEecCCCCCCCCCcHHHHHHHHcCCCccccC
Q psy2376 706 IKTAVDMNADAILVHH---GYFWKGENSNIVGIKKKRLEQLIINKI-NLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF 781 (896)
Q Consensus 706 i~~A~~~~~~lIitHH---P~~f~~~~~~~~~~~~~~~~~l~~~~I-~vy~~Ht~lD~~~~~G~n~~la~~Lgl~~~~~~ 781 (896)
++++.+.|||.++.=| .+.+.. ..+++..+.++|+ .+.+.|+..+. .-+..++-.-.-.-
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e--------~~~~~~~a~~~Gl~~iv~v~~~~e~--------~~~~~~~~~~i~~~ 138 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLAD--------IEAVINKCKNLGLETIVCTNNINTS--------KAVAALSPDCIAVE 138 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHH--------HHHHHHHHHHHTCEEEEEESSSHHH--------HHHTTTCCSEEEEC
T ss_pred HHHHHHcCCCEEEECCccccCCHHH--------HHHHHHHHHHCCCeEEEEeCCchHH--------HHHHhCCCCEEEEE
Q ss_pred ccCcccccc---eeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCc---hHHHHHHHHcCCcE
Q psy2376 782 SKNNIGWIG---KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA---QNLLTDAINEGVTA 855 (896)
Q Consensus 782 ~~~~~g~~g---~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg---~~~i~~a~~~g~D~ 855 (896)
....+| -| + ...+-.+++..+.+++.. +.+-++.|+| .+..+.+.+.|+|.
T Consensus 139 ~~~~iG-tG~~~~--------t~~~~~~~~~~~~ir~~~--------------~~~~ii~ggGI~~~~~~~~~~~~gaDg 195 (219)
T 2h6r_A 139 PPELIG-TGIPVS--------KANPEVVEGTVRAVKEIN--------------KDVKVLCGAGISKGEDVKAALDLGAEG 195 (219)
T ss_dssp CCC-----------------------CSHHHHHHHHHHC--------------TTCEEEECSSCCSHHHHHHHHTTTCCC
T ss_pred eccccc-cCCCCc--------cCCHHHHHHHHHHHHhcc--------------CCCeEEEEeCcCcHHHHHHHhhCCCCE
Q ss_pred EEEc
Q psy2376 856 YISG 859 (896)
Q Consensus 856 ~ITG 859 (896)
++-|
T Consensus 196 vlVG 199 (219)
T 2h6r_A 196 VLLA 199 (219)
T ss_dssp EEES
T ss_pred EEEc
No 424
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=23.46 E-value=60 Score=19.98 Aligned_cols=22 Identities=32% Similarity=0.298 Sum_probs=16.3
Q ss_pred HhhhHHHHHHHHHHHHhccccC
Q psy2376 594 INQELKNLSIALKIGFKKLNIK 615 (896)
Q Consensus 594 vn~el~~l~~~l~~~~~~l~~~ 615 (896)
.-.||+.|++-|++..+.|+.|
T Consensus 6 lykeledlqerlrklrkklrsg 27 (27)
T 3twe_A 6 LYKELEDLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 3468888988888887777654
No 425
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=23.35 E-value=38 Score=34.12 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhccccCceEEEEeecch
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFHSL 626 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfhsl 626 (896)
...+.+|+.+.++|+|||++++..+..-
T Consensus 136 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 136 ENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5667889999999999999999877543
No 426
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=23.31 E-value=62 Score=33.61 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=28.5
Q ss_pred HHHHHHhccccCceEEEEeecch---hHHHHHHHHhh
Q psy2376 604 ALKIGFKKLNIKGRIVVISFHSL---EDRIVKNFINF 637 (896)
Q Consensus 604 ~l~~~~~~l~~~g~~~visfhsl---edr~vk~~~~~ 637 (896)
+++.|.++|+|||.+++..|+-- ++.+++..-|.
T Consensus 236 al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~ 272 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQ 272 (320)
T ss_dssp THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHh
Confidence 78999999999999999999987 66666665554
No 427
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=23.23 E-value=1e+02 Score=27.57 Aligned_cols=101 Identities=20% Similarity=0.229 Sum_probs=58.3
Q ss_pred cCCChhHHHHHHHcC--CCcEEEEE-eCCHHHHHHhhcccCCCeEEEccChhcHHHHHHhcCCCcccEEEEecccCccc-
Q psy2376 415 FGQGGHSCKILERLG--KKGRLIAI-DKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQ- 490 (896)
Q Consensus 415 ~G~Gghs~~ll~~~~--~~~~~~~~-D~d~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~il~dlG~ss~q- 490 (896)
+|.|+|+..+++.+. +.-++.|| |-|++.. .+. . ..+..+ + .+++.+++++. ++|.+++-++-.+.+
T Consensus 10 iGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~--g~~-i-~g~pV~-g-~~~l~~~~~~~---~id~viia~~~~~~~~ 80 (141)
T 3nkl_A 10 YGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKH--KTT-M-QGITIY-R-PKYLERLIKKH---CISTVLLAVPSASQVQ 80 (141)
T ss_dssp ECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGT--TCE-E-TTEEEE-C-GGGHHHHHHHH---TCCEEEECCTTSCHHH
T ss_pred ECCCHHHHHHHHHHHhCCCcEEEEEEECCcccC--CCE-e-cCeEEE-C-HHHHHHHHHHC---CCCEEEEeCCCCCHHH
Confidence 799999999888763 34578876 6665321 111 1 234444 4 78899998876 478888877755431
Q ss_pred ---c--CCCCCCccCCC-CCCcc-----ccCCCCCCCCHHHHHhc
Q psy2376 491 ---I--NNELRGFSFLL-DGPLD-----MRMDITRGISASKWLAN 524 (896)
Q Consensus 491 ---~--~~~~rgfs~~~-~~~ld-----mrm~~~~~~~a~~~~~~ 524 (896)
+ .-.+.|..+.. ...-| .++++-..++-+|+|.+
T Consensus 81 ~~~i~~~l~~~gv~v~~vP~~~~~~~~~~~~~~l~~v~iedlLgR 125 (141)
T 3nkl_A 81 KKVIIESLAKLHVEVLTIPNLDDLVNGKLSIGQLKEVSIDDLLGR 125 (141)
T ss_dssp HHHHHHHHHTTTCEEEECCCHHHHHTTSSCTTCCEECCHHHHHC-
T ss_pred HHHHHHHHHHcCCeEEECCCHHHHhCCCcccccCCCCCHHHcCCC
Confidence 1 11245665542 11111 12344456777888765
No 428
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=23.04 E-value=70 Score=31.35 Aligned_cols=23 Identities=22% Similarity=-0.012 Sum_probs=19.7
Q ss_pred HHHHHHHHhccccCceEEEEeec
Q psy2376 602 SIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 602 ~~~l~~~~~~l~~~g~~~visfh 624 (896)
+.+|+.+.++|+|||++++.|-+
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCCEEEEEeCC
Confidence 56788899999999999998844
No 429
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=22.92 E-value=30 Score=34.38 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhccccCceEEEEeec
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
..+.+++.+.++|+|||+++++.|.
T Consensus 149 ~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 149 MRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEec
Confidence 4557788889999999999987763
No 430
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=22.91 E-value=1.9e+02 Score=28.54 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=63.1
Q ss_pred HHHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeEE-Ee--cCCCCCCCCCcHHHHHHHHcCCCcccc
Q psy2376 704 DLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLY-AY--HLPLDMHPKLGNNAQLAKILNFSCTRR 780 (896)
Q Consensus 704 ~vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy-~~--Ht~lD~~~~~G~n~~la~~Lgl~~~~~ 780 (896)
+.++.+.+.|+|.|..|--. .+.+..+.++.+.++|+.+. +. ||+.+.. ..++....+. +.-.
T Consensus 78 ~~i~~~~~agad~v~vH~~~--------~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~-----~~~~~~~~~~-d~vl 143 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEV--------SRDNWQELIQSIKAKGMRPGVSLRPGTPVEEV-----FPLVEAENPV-ELVL 143 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGG--------CTTTHHHHHHHHHHTTCEEEEEECTTSCGGGG-----HHHHHSSSCC-SEEE
T ss_pred HHHHHHHHcCCCEEEECCCC--------cccHHHHHHHHHHHcCCCEEEEEeCCCCHHHH-----HHHHhcCCCC-CEEE
Confidence 36899999999999999421 11121456777777776443 34 4444332 2221100011 1111
Q ss_pred CccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEcc
Q psy2376 781 FSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGE 860 (896)
Q Consensus 781 ~~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd 860 (896)
+.....|.-|+- + .+..+ +.++++++..+ + ..|.+.+|=..+-+.++.+.|+|.++.|-
T Consensus 144 ~~sv~pg~~g~~-------~-~~~~l-~~i~~~~~~~~---------~---~pi~v~GGI~~~ni~~~~~aGaD~vvvGs 202 (228)
T 1h1y_A 144 VMTVEPGFGGQK-------F-MPEMM-EKVRALRKKYP---------S---LDIEVDGGLGPSTIDVAASAGANCIVAGS 202 (228)
T ss_dssp EESSCTTCSSCC-------C-CGGGH-HHHHHHHHHCT---------T---SEEEEESSCSTTTHHHHHHHTCCEEEESH
T ss_pred EEeecCCCCccc-------C-CHHHH-HHHHHHHHhcC---------C---CCEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 110000111210 1 12233 34556666541 1 13666777777778888888999999984
No 431
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.73 E-value=1.4e+02 Score=29.85 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=48.8
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhhcccCCCeEEEccChhc---HHHHHHhc--CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE---LDIILKKY--NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~-~~~~~~~~D~d~~a~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il~dlG~ 486 (896)
.|=|.||=-+++.+++- ...+|+..|++++..+...+...++...+..+..+ +.+.+++. ..+++|.++-+=|+
T Consensus 14 VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 14 VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93 (248)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 46677776666666653 24699999999988776654344556666666544 33333321 11369999999887
Q ss_pred C
Q psy2376 487 S 487 (896)
Q Consensus 487 s 487 (896)
.
T Consensus 94 ~ 94 (248)
T 3op4_A 94 T 94 (248)
T ss_dssp C
T ss_pred C
Confidence 5
No 432
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=22.65 E-value=1e+02 Score=30.74 Aligned_cols=76 Identities=16% Similarity=0.185 Sum_probs=48.1
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhcccCCCe-EEEccChhcH---HHHHHhc-CCCcccEEEEeccc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRF-SIIHNCFTEL---DIILKKY-NIKKIDGILFDLGI 486 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~~~~~~~-~~~~~~~~~~---~~~l~~~-~~~~~d~il~dlG~ 486 (896)
.|=|.||=-.++.+++.. +.+|+++|++++.++...+....++ .++..+..+. .+.+++. ..+++|.++-+-|+
T Consensus 16 ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~ 95 (254)
T 2wsb_A 16 VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGI 95 (254)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCcc
Confidence 466677766666665532 4589999999987765533224456 7777666543 3333221 02369999999997
Q ss_pred Cc
Q psy2376 487 SS 488 (896)
Q Consensus 487 ss 488 (896)
..
T Consensus 96 ~~ 97 (254)
T 2wsb_A 96 AR 97 (254)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 433
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=22.47 E-value=38 Score=32.81 Aligned_cols=26 Identities=19% Similarity=0.176 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhccccCceEEEEeecc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
..+++|+.+.++|||||++++.+++.
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 34677889999999999999887754
No 434
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=21.97 E-value=44 Score=32.39 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhccccCceEEEEe
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVIS 622 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~vis 622 (896)
+.++.+|+.+.++|+|||++++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 356778999999999999998864
No 435
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=21.92 E-value=32 Score=32.44 Aligned_cols=20 Identities=15% Similarity=0.001 Sum_probs=17.9
Q ss_pred HHHHHHHHHhccccCceEEE
Q psy2376 601 LSIALKIGFKKLNIKGRIVV 620 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~v 620 (896)
++++|+++.++|||||++++
T Consensus 80 ~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 80 SAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 36789999999999999998
No 436
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=21.90 E-value=58 Score=33.35 Aligned_cols=41 Identities=7% Similarity=0.038 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHhccccCceEEEEeecchhHHHHHHHHhh
Q psy2376 596 QELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF 637 (896)
Q Consensus 596 ~el~~l~~~l~~~~~~l~~~g~~~visfhsledr~vk~~~~~ 637 (896)
+-++.+++.++.+.++|+|||++++..-+.-+ .-+++.+++
T Consensus 212 ~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~l~~ 252 (276)
T 2b3t_A 212 SGMADIVHIIEQSRNALVSGGFLLLEHGWQQG-EAVRQAFIL 252 (276)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEECCSSCH-HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEEEECchHH-HHHHHHHHH
Confidence 44677889999999999999999875322222 235666654
No 437
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=21.75 E-value=40 Score=33.41 Aligned_cols=26 Identities=15% Similarity=0.238 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhccccCceEEEEeecc
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
..+++|+.+.++|+|||++++...|.
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 35677899999999999999988875
No 438
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=21.57 E-value=1.9e+02 Score=29.16 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=48.9
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeC-CHHHHHHhhc-c---cCCCeEEEccChhc-------HHHHHHhc--CCCcc
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDK-DTESVSLGNK-I---TDSRFSIIHNCFTE-------LDIILKKY--NIKKI 477 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~-d~~a~~~~~~-~---~~~~~~~~~~~~~~-------~~~~l~~~--~~~~~ 477 (896)
.|=|.||=-+++.+++-. ..+|+..|+ +++..+...+ + ...++.++..+..+ +.+.+++. ..+++
T Consensus 16 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~i 95 (276)
T 1mxh_A 16 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRC 95 (276)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCC
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCC
Confidence 577778777777766532 458999999 8887665432 2 14577777666543 33333221 12369
Q ss_pred cEEEEecccCc
Q psy2376 478 DGILFDLGISS 488 (896)
Q Consensus 478 d~il~dlG~ss 488 (896)
|.++-+-|++.
T Consensus 96 d~lv~nAg~~~ 106 (276)
T 1mxh_A 96 DVLVNNASAYY 106 (276)
T ss_dssp CEEEECCCCCC
T ss_pred CEEEECCCCCC
Confidence 99999999864
No 439
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=21.41 E-value=41 Score=32.72 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=21.1
Q ss_pred HHHHHHHHHhccccCceEEEEeecc
Q psy2376 601 LSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.+.+|+.+.++|+|||++++..+++
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 4667888899999999999987765
No 440
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=21.38 E-value=1.7e+02 Score=29.76 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=51.8
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhc-c--cCCCeEEEccChhc---HHH----HHHhcCCCcccEEE
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNK-I--TDSRFSIIHNCFTE---LDI----ILKKYNIKKIDGIL 481 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~-~--~~~~~~~~~~~~~~---~~~----~l~~~~~~~~d~il 481 (896)
.|=|.+|=-+++.+++.. .++|+..|++++.++.+.+ + ...++..+..+-++ +++ ..+++ +++|..+
T Consensus 14 VTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--G~iDiLV 91 (255)
T 4g81_D 14 VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG--IHVDILI 91 (255)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT--CCCCEEE
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC--CCCcEEE
Confidence 488888888888887744 4699999999998876643 2 34567777766543 333 33444 4799999
Q ss_pred EecccC
Q psy2376 482 FDLGIS 487 (896)
Q Consensus 482 ~dlG~s 487 (896)
-|=|++
T Consensus 92 NNAG~~ 97 (255)
T 4g81_D 92 NNAGIQ 97 (255)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 998874
No 441
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=21.37 E-value=34 Score=33.70 Aligned_cols=24 Identities=21% Similarity=0.138 Sum_probs=19.1
Q ss_pred HHHHHHHHHhccccCceEEEEeec
Q psy2376 601 LSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 601 l~~~l~~~~~~l~~~g~~~visfh 624 (896)
.+.+++.+.++|||||++++..-+
T Consensus 140 ~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 140 IEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHHHhCCCCEEEEEEec
Confidence 445688889999999999988433
No 442
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=20.87 E-value=48 Score=34.11 Aligned_cols=26 Identities=19% Similarity=0.086 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhccccCceEEEEeec
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
+..+++|+++.++|||||++++...+
T Consensus 152 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 152 SEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 45677899999999999999876554
No 443
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=20.84 E-value=5.2e+02 Score=25.48 Aligned_cols=123 Identities=16% Similarity=0.161 Sum_probs=63.6
Q ss_pred HHHHHHHcCCCEEEEccCCCccCCCCccCChHHHHHHHHHHcCCeE-EEe--cCCCCCCCCCcHHHHHHHHcCCCccccC
Q psy2376 705 LIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINL-YAY--HLPLDMHPKLGNNAQLAKILNFSCTRRF 781 (896)
Q Consensus 705 vi~~A~~~~~~lIitHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~v-y~~--Ht~lD~~~~~G~n~~la~~Lgl~~~~~~ 781 (896)
.++.|.+.|+|.+..|---. + .+...+.++.+.++|+.+ .+. ||+.+..... .+ .++.+.+ -+.
T Consensus 77 ~i~~~~~aGadgv~vh~e~~--~-----~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~--~~-~~D~v~~---msv 143 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHN--A-----SPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYV--LP-VCDLILI---MSV 143 (230)
T ss_dssp THHHHHHHTCSEEEEECSTT--T-----CTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTT--GG-GCSEEEE---ESS
T ss_pred HHHHHHHcCCCEEEECcccc--c-----chhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHH--Hh-cCCEEEE---EEe
Confidence 57999999999999993100 1 123456777888887643 344 7876665320 00 0001100 000
Q ss_pred ccCcccccceeecccccccCCccCHHHHHHHHHhHhCCCcEEEcCCCCceeEEEEEecCchHHHHHHHHcCCcEEEEcc
Q psy2376 782 SKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGE 860 (896)
Q Consensus 782 ~~~~~g~~g~i~~~~~~~~~~~~~~~el~~~~~~~l~~~~~~~g~~~~~v~rvai~~Gsg~~~i~~a~~~g~D~~ITGd 860 (896)
. ++.| |+- + .+ +..+.++++++..+.. +.+ -.|.+-+|=..+-+.++.++|||.++.|-
T Consensus 144 ~-pg~g--gq~-------~-~~-~~~~~i~~lr~~~~~~-----~~~---~~I~v~GGI~~~~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 144 N-PGFG--GQS-------F-IP-EVLPKIRALRQMCDER-----GLD---PWIEVDGGLKPNNTWQVLEAGANAIVAGS 202 (230)
T ss_dssp C-C------CC-------C-CG-GGHHHHHHHHHHHHHH-----TCC---CEEEEESSCCTTTTHHHHHHTCCEEEESH
T ss_pred c-cccC--Ccc-------C-cH-HHHHHHHHHHHHHHhc-----CCC---CcEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 0 0111 110 1 12 2334455566554210 001 13555566556677788888999999984
No 444
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=20.83 E-value=46 Score=34.17 Aligned_cols=29 Identities=10% Similarity=0.245 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhH
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLED 628 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsled 628 (896)
..+.+++.+.++|||||++++..+..-+.
T Consensus 146 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 174 (287)
T 1kpg_A 146 RYDAFFSLAHRLLPADGVMLLHTITGLHP 174 (287)
T ss_dssp THHHHHHHHHHHSCTTCEEEEEEEEECCH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEecCCCc
Confidence 45677899999999999999888765443
No 445
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=20.80 E-value=2.4e+02 Score=28.26 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=48.9
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhc-c--cCCCeEEEccChhcHH---HHH----HhcCCCcccEEE
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNK-I--TDSRFSIIHNCFTELD---IIL----KKYNIKKIDGIL 481 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~-~--~~~~~~~~~~~~~~~~---~~l----~~~~~~~~d~il 481 (896)
.|=|.||=-+++.+++-. ..+|+..|++++.++...+ + ...++.++..+..+-+ +.+ +++ +++|.++
T Consensus 12 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~lv 89 (262)
T 1zem_A 12 VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF--GKIDFLF 89 (262)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEE
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh--CCCCEEE
Confidence 576777777777766533 4589999999988765432 2 2456888877765533 222 333 3699999
Q ss_pred EecccC
Q psy2376 482 FDLGIS 487 (896)
Q Consensus 482 ~dlG~s 487 (896)
-+-|+.
T Consensus 90 ~nAg~~ 95 (262)
T 1zem_A 90 NNAGYQ 95 (262)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 999975
No 446
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=20.80 E-value=65 Score=32.78 Aligned_cols=24 Identities=13% Similarity=0.062 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhccccCceEEEEee
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISF 623 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visf 623 (896)
.++.+++.+.++|+|||+++++.-
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 367789999999999999987643
No 447
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=20.80 E-value=50 Score=33.85 Aligned_cols=28 Identities=18% Similarity=0.133 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhccccCceEEEEeecc
Q psy2376 598 LKNLSIALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 598 l~~l~~~l~~~~~~l~~~g~~~visfhs 625 (896)
.+..+++|+.+.++|+|||++++.+.+.
T Consensus 150 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 150 SESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4567888999999999999999877663
No 448
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=20.54 E-value=2.3e+02 Score=28.21 Aligned_cols=75 Identities=7% Similarity=0.077 Sum_probs=50.6
Q ss_pred EccCCChhHHHHHHHcC----CCcEEEEEeCCHHHHHHhhc-c----cCCCeEEEccChhc---HHHHHHhc----CCCc
Q psy2376 413 ATFGQGGHSCKILERLG----KKGRLIAIDKDTESVSLGNK-I----TDSRFSIIHNCFTE---LDIILKKY----NIKK 476 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~----~~~~~~~~D~d~~a~~~~~~-~----~~~~~~~~~~~~~~---~~~~l~~~----~~~~ 476 (896)
.|=|.||=-+++.+++. ...+|+..|++++.++...+ + ...++.++..+..+ +.+.+++. ..++
T Consensus 11 VTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~ 90 (259)
T 1oaa_A 11 LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEG 90 (259)
T ss_dssp ESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTT
T ss_pred EeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcccccc
Confidence 47778888888887764 35799999999988765532 2 14568888777654 34444322 3345
Q ss_pred cc--EEEEecccC
Q psy2376 477 ID--GILFDLGIS 487 (896)
Q Consensus 477 ~d--~il~dlG~s 487 (896)
+| .++-+-|+.
T Consensus 91 ~d~~~lvnnAg~~ 103 (259)
T 1oaa_A 91 LQRLLLINNAATL 103 (259)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCccEEEECCccc
Confidence 77 888888874
No 449
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=20.53 E-value=1.8e+02 Score=29.24 Aligned_cols=73 Identities=22% Similarity=0.238 Sum_probs=50.9
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhc-c----cCCCeEEEccChh---cHHHHHHhcCCCcccEEEEe
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNK-I----TDSRFSIIHNCFT---ELDIILKKYNIKKIDGILFD 483 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~-~----~~~~~~~~~~~~~---~~~~~l~~~~~~~~d~il~d 483 (896)
.|=|.||=-.++.+++.. ..+|+..|++++..+...+ + .+.++..+..+.+ .+.+.+++++ ++|.++-+
T Consensus 15 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g--~id~lv~n 92 (267)
T 3t4x_A 15 VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP--KVDILINN 92 (267)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC--CCSEEEEC
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC--CCCEEEEC
Confidence 477778777777766533 4699999999988765532 2 1345677766654 4566666654 79999999
Q ss_pred cccC
Q psy2376 484 LGIS 487 (896)
Q Consensus 484 lG~s 487 (896)
-|++
T Consensus 93 Ag~~ 96 (267)
T 3t4x_A 93 LGIF 96 (267)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9975
No 450
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=20.47 E-value=1.8e+02 Score=29.25 Aligned_cols=75 Identities=20% Similarity=0.298 Sum_probs=48.5
Q ss_pred EccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhhc-c--c--CCCeEEEccChhc---HHHHHHhc--CCCcccEEE
Q psy2376 413 ATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNK-I--T--DSRFSIIHNCFTE---LDIILKKY--NIKKIDGIL 481 (896)
Q Consensus 413 ~T~G~Gghs~~ll~~~~~-~~~~~~~D~d~~a~~~~~~-~--~--~~~~~~~~~~~~~---~~~~l~~~--~~~~~d~il 481 (896)
.|=|.||=-+++.+++-. +.+|+..|++++..+...+ + . ..++.++..+..+ +.+.+++. ..+++|.++
T Consensus 18 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 97 (267)
T 1iy8_A 18 ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFF 97 (267)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 466777766666666532 4589999999987765432 2 1 4578888777654 33333321 123699999
Q ss_pred EecccC
Q psy2376 482 FDLGIS 487 (896)
Q Consensus 482 ~dlG~s 487 (896)
-+-|+.
T Consensus 98 ~nAg~~ 103 (267)
T 1iy8_A 98 NNAGIE 103 (267)
T ss_dssp ECCCCC
T ss_pred ECCCcC
Confidence 999975
No 451
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=20.45 E-value=38 Score=33.44 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhccccCceEEEEee
Q psy2376 599 KNLSIALKIGFKKLNIKGRIVVISF 623 (896)
Q Consensus 599 ~~l~~~l~~~~~~l~~~g~~~visf 623 (896)
+.++++|+.+.++|+|||++++-.+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 5677889999999999999987544
No 452
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=20.44 E-value=1.3e+02 Score=31.58 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=19.2
Q ss_pred HHHHHHHhccccCceEEEEeecc
Q psy2376 603 IALKIGFKKLNIKGRIVVISFHS 625 (896)
Q Consensus 603 ~~l~~~~~~l~~~g~~~visfhs 625 (896)
..|+.+.++|||||++++-.|+.
T Consensus 172 ~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 172 RVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHHhCCCCEEEEEeCCC
Confidence 47788889999999998877766
No 453
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=20.39 E-value=77 Score=32.77 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=23.0
Q ss_pred eEEEEEecCch----HHHHHHHHcCCcEEEEccC
Q psy2376 832 YEIGWCTGAAQ----NLLTDAINEGVTAYISGEI 861 (896)
Q Consensus 832 ~rvai~~Gsg~----~~i~~a~~~g~D~~ITGd~ 861 (896)
.|||+++|+++ ..-+...+.|+++++++--
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47999998874 3455668899999999743
No 454
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=20.36 E-value=48 Score=33.50 Aligned_cols=29 Identities=14% Similarity=0.005 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhccccCceEEEEeecchhH
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFHSLED 628 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfhsled 628 (896)
+-+.++.++...||||||+++.---.-||
T Consensus 160 ~~~~~l~~~~r~LKpGG~lvI~ik~r~~d 188 (233)
T 4df3_A 160 QAAIVVRNARFFLRDGGYMLMAIKARSID 188 (233)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred hHHHHHHHHHHhccCCCEEEEEEecccCC
Confidence 34567888999999999998753333344
No 455
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=20.09 E-value=49 Score=32.93 Aligned_cols=25 Identities=24% Similarity=0.142 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhccccCceEEEEeec
Q psy2376 600 NLSIALKIGFKKLNIKGRIVVISFH 624 (896)
Q Consensus 600 ~l~~~l~~~~~~l~~~g~~~visfh 624 (896)
.++.+|+.+.++|+|||++++..+.
T Consensus 163 ~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 163 HLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 3567899999999999999987654
Done!