Query psy2378
Match_columns 956
No_of_seqs 926 out of 6787
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:28:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 2.8E-50 9.7E-55 451.8 21.8 297 9-320 2-299 (350)
2 1olt_A Oxygen-independent copr 100.0 3.5E-49 1.2E-53 460.5 28.0 334 622-955 57-442 (457)
3 1tks_A 3,4-dihydroxy-2-butanon 100.0 3.2E-51 1.1E-55 408.1 8.5 165 270-434 27-199 (204)
4 1k4i_A 3,4-dihydroxy-2-butanon 100.0 1.6E-50 5.5E-55 408.6 7.6 171 270-440 34-223 (233)
5 3mio_A DHBP synthase, 3,4-dihy 100.0 2.7E-50 9.3E-55 402.8 8.5 167 270-436 26-201 (206)
6 1snn_A DHBP synthase, 3,4-dihy 100.0 2E-50 6.7E-55 408.9 2.4 166 270-436 23-219 (227)
7 1g57_A DHBP synthase, 3,4-dihy 100.0 1.2E-47 4.2E-52 388.1 10.3 168 270-437 35-209 (217)
8 1vhn_A Putative flavin oxidore 100.0 3.9E-45 1.3E-49 406.2 18.2 284 10-321 4-292 (318)
9 1z41_A YQJM, probable NADH-dep 100.0 3.2E-34 1.1E-38 320.7 18.6 241 2-249 10-324 (338)
10 2r14_A Morphinone reductase; H 100.0 2.1E-34 7.2E-39 324.9 16.6 233 2-247 16-343 (377)
11 1vyr_A Pentaerythritol tetrani 100.0 1.1E-33 3.6E-38 318.4 19.0 232 2-247 10-338 (364)
12 2hsa_B 12-oxophytodienoate red 100.0 1.9E-33 6.4E-38 319.5 18.2 241 2-247 23-363 (402)
13 3gr7_A NADPH dehydrogenase; fl 100.0 3.2E-33 1.1E-37 311.6 19.2 241 2-249 10-324 (340)
14 1icp_A OPR1, 12-oxophytodienoa 100.0 2.1E-33 7.1E-38 317.1 15.0 234 2-247 21-345 (376)
15 2gou_A Oxidoreductase, FMN-bin 100.0 2.7E-33 9.3E-38 315.2 15.8 232 2-247 10-337 (365)
16 3kru_A NADH:flavin oxidoreduct 100.0 1.6E-32 5.6E-37 305.1 16.1 236 2-246 9-321 (343)
17 3nq4_A 6,7-dimethyl-8-ribityll 100.0 8.8E-33 3E-37 266.0 9.5 100 420-524 44-143 (156)
18 3l5a_A NADH/flavin oxidoreduct 100.0 5.4E-32 1.8E-36 308.4 17.1 242 4-249 35-363 (419)
19 3hgj_A Chromate reductase; TIM 100.0 2.4E-31 8.3E-36 298.3 20.2 241 2-249 9-335 (349)
20 1kz1_A 6,7-dimethyl-8-ribityll 100.0 2.3E-32 8E-37 263.8 9.5 99 421-524 50-149 (159)
21 2i0f_A 6,7-dimethyl-8-ribityll 100.0 2.5E-32 8.6E-37 263.9 9.6 106 414-524 32-144 (157)
22 1c2y_A Protein (lumazine synth 100.0 1.9E-32 6.6E-37 264.0 7.5 107 414-525 33-143 (156)
23 1hqk_A 6,7-dimethyl-8-ribityll 100.0 4E-32 1.4E-36 262.1 9.2 103 420-527 43-145 (154)
24 1rvv_A Riboflavin synthase; tr 100.0 7.5E-32 2.6E-36 259.8 10.7 102 420-526 43-144 (154)
25 3gka_A N-ethylmaleimide reduct 100.0 2.4E-31 8.1E-36 297.0 15.1 227 2-248 17-332 (361)
26 4ab4_A Xenobiotic reductase B; 100.0 3.1E-31 1.1E-35 296.2 15.4 227 2-248 9-324 (362)
27 1ejb_A Lumazine synthase; anal 100.0 5.2E-32 1.8E-36 264.2 7.6 107 420-527 47-158 (168)
28 3l5l_A Xenobiotic reductase A; 100.0 8.7E-31 3E-35 295.1 16.5 241 2-249 9-342 (363)
29 1ps9_A 2,4-dienoyl-COA reducta 100.0 2.2E-30 7.6E-35 317.0 18.4 243 2-248 10-326 (671)
30 1di0_A Lumazine synthase; tran 100.0 1.2E-31 4.1E-36 259.9 4.0 89 421-509 42-130 (158)
31 2c92_A 6,7-dimethyl-8-ribityll 100.0 3.8E-31 1.3E-35 256.1 7.4 106 415-525 38-146 (160)
32 2obx_A DMRL synthase 1, 6,7-di 100.0 1.3E-31 4.3E-36 259.5 4.0 89 421-509 43-131 (157)
33 1c41_A Lumazine synthase; ribo 99.9 5.9E-32 2E-36 267.2 0.0 114 414-530 35-189 (200)
34 1o94_A Tmadh, trimethylamine d 100.0 2.8E-30 9.5E-35 318.2 14.6 239 2-247 14-336 (729)
35 3k30_A Histamine dehydrogenase 100.0 3.4E-30 1.2E-34 316.1 15.2 241 1-247 18-339 (690)
36 1jub_A Dihydroorotate dehydrog 100.0 3.1E-28 1.1E-32 270.0 18.8 234 2-249 5-289 (311)
37 3tjl_A NADPH dehydrogenase; OL 100.0 5.5E-29 1.9E-33 280.0 11.9 236 2-248 19-362 (407)
38 3aty_A Tcoye, prostaglandin F2 100.0 2.3E-28 7.8E-33 275.6 15.6 231 2-248 12-352 (379)
39 2e6f_A Dihydroorotate dehydrog 100.0 8.8E-28 3E-32 266.8 17.8 233 3-249 8-291 (314)
40 4ef8_A Dihydroorotate dehydrog 99.9 2.8E-27 9.5E-32 262.9 18.3 233 3-249 41-324 (354)
41 1f76_A Dihydroorotate dehydrog 99.9 2.3E-27 7.9E-32 265.8 15.8 231 3-248 49-335 (336)
42 3oix_A Putative dihydroorotate 99.9 5.2E-27 1.8E-31 260.2 16.9 228 3-249 42-322 (345)
43 4a3u_A NCR, NADH\:flavin oxido 99.9 6.7E-27 2.3E-31 262.7 15.6 235 2-248 9-331 (358)
44 2b99_A Riboflavin synthase; lu 99.9 9.4E-28 3.2E-32 230.2 3.0 81 424-508 33-114 (156)
45 1tv5_A Dhodehase, dihydroorota 99.9 1.1E-25 3.9E-30 256.5 16.9 234 2-249 85-420 (443)
46 3zwt_A Dihydroorotate dehydrog 99.9 2.2E-25 7.4E-30 249.8 17.5 173 63-249 146-345 (367)
47 1ep3_A Dihydroorotate dehydrog 99.9 1.1E-25 3.8E-30 249.7 12.5 232 3-249 11-287 (311)
48 4gbu_A NADPH dehydrogenase 1; 99.9 2.4E-25 8.2E-30 253.7 14.2 241 2-248 22-364 (400)
49 3i65_A Dihydroorotate dehydrog 99.9 6.5E-24 2.2E-28 238.3 16.4 173 63-249 181-392 (415)
50 1gte_A Dihydropyrimidine dehyd 99.9 2.2E-23 7.6E-28 265.3 23.4 236 5-249 539-834 (1025)
51 2qgq_A Protein TM_1862; alpha- 99.9 6.8E-23 2.3E-27 226.2 18.2 206 622-837 9-224 (304)
52 3d3b_A Protein NUSB, N utiliza 99.9 3.8E-22 1.3E-26 193.9 9.3 131 529-659 5-135 (141)
53 1tzv_A NUSB protein, N utiliza 99.9 5.8E-22 2E-26 192.9 8.7 131 529-660 2-134 (142)
54 3r2d_A Protein NUSB, N utiliza 99.9 8.6E-22 2.9E-26 192.6 9.3 132 529-660 2-135 (149)
55 2nli_A Lactate oxidase; flavoe 99.8 7.7E-21 2.6E-25 213.6 15.9 211 4-245 75-321 (368)
56 1r30_A Biotin synthase; SAM ra 99.8 5E-20 1.7E-24 209.0 16.9 223 623-877 72-305 (369)
57 1p0k_A Isopentenyl-diphosphate 99.8 4.6E-20 1.6E-24 207.4 16.0 213 4-238 50-286 (349)
58 2nzl_A Hydroxyacid oxidase 1; 99.8 1.6E-19 5.4E-24 204.3 15.5 206 4-236 89-340 (392)
59 1eyv_A NUSB protein, N-utilizi 99.8 3.9E-20 1.3E-24 182.3 8.8 131 529-659 7-141 (156)
60 1gox_A (S)-2-hydroxy-acid oxid 99.8 6.6E-19 2.2E-23 198.8 18.6 205 4-236 66-313 (370)
61 3tjx_A Dihydroorotate dehydrog 99.8 5.5E-19 1.9E-23 198.9 17.4 176 62-249 125-324 (354)
62 1kbi_A Cytochrome B2, L-LCR; f 99.8 5.8E-18 2E-22 197.6 18.9 206 5-236 185-436 (511)
63 3t7v_A Methylornithine synthas 99.8 8.3E-18 2.8E-22 189.4 17.7 202 624-839 68-271 (350)
64 2z6i_A Trans-2-enoyl-ACP reduc 99.7 1.4E-17 4.8E-22 185.7 16.6 189 10-242 12-201 (332)
65 3iix_A Biotin synthetase, puta 99.7 1.6E-17 5.6E-22 186.9 17.1 201 624-838 60-261 (348)
66 1vcf_A Isopentenyl-diphosphate 99.7 1.5E-17 5.1E-22 185.5 12.1 213 4-238 53-291 (332)
67 2yxl_A PH0851 protein, 450AA l 99.7 4.4E-17 1.5E-21 189.4 9.9 197 529-728 7-211 (450)
68 1p4c_A L(+)-mandelate dehydrog 99.7 5.9E-16 2E-20 175.0 15.1 204 4-237 67-312 (380)
69 1sqg_A SUN protein, FMU protei 99.6 1.4E-16 4.8E-21 184.2 7.5 190 533-728 5-198 (429)
70 3vkj_A Isopentenyl-diphosphate 99.6 8.1E-16 2.8E-20 172.1 12.7 216 3-236 53-300 (368)
71 1mzh_A Deoxyribose-phosphate a 99.6 8.1E-16 2.8E-20 161.4 11.1 192 13-247 11-215 (225)
72 3bo9_A Putative nitroalkan dio 99.6 1.1E-14 3.7E-19 161.7 18.0 188 10-241 26-214 (326)
73 2gjl_A Hypothetical protein PA 99.6 2.1E-14 7E-19 160.0 18.3 190 10-240 15-209 (328)
74 3bw2_A 2-nitropropane dioxygen 99.6 2.3E-14 8E-19 162.0 18.8 197 10-242 10-247 (369)
75 1ypf_A GMP reductase; GUAC, pu 99.6 2.2E-14 7.6E-19 159.8 16.7 197 5-237 42-244 (336)
76 3sr7_A Isopentenyl-diphosphate 99.5 2.3E-14 7.9E-19 159.6 13.1 215 3-236 80-311 (365)
77 1eep_A Inosine 5'-monophosphat 99.5 2.5E-13 8.7E-18 155.4 16.2 201 5-243 38-296 (404)
78 1jvn_A Glutamine, bifunctional 99.4 2.3E-13 8E-18 161.2 10.3 211 31-253 290-547 (555)
79 3khj_A Inosine-5-monophosphate 99.4 3E-12 1E-16 143.2 17.9 199 10-245 45-249 (361)
80 3c8f_A Pyruvate formate-lyase 99.4 8.3E-12 2.8E-16 132.4 17.1 206 624-843 26-242 (245)
81 2yzr_A Pyridoxal biosynthesis 99.4 1.4E-12 4.9E-17 140.0 11.0 154 79-240 27-281 (330)
82 3r2g_A Inosine 5'-monophosphat 99.4 7.1E-12 2.4E-16 138.9 16.3 200 4-244 37-240 (361)
83 2agk_A 1-(5-phosphoribosyl)-5- 99.3 1.1E-12 3.7E-17 140.4 8.0 194 21-249 36-256 (260)
84 2y88_A Phosphoribosyl isomeras 99.3 6E-12 2.1E-16 134.0 13.6 156 63-249 74-242 (244)
85 3o07_A Pyridoxine biosynthesis 99.3 7.3E-12 2.5E-16 130.3 10.9 146 79-240 21-237 (291)
86 2yx0_A Radical SAM enzyme; pre 99.3 1.3E-11 4.4E-16 138.3 13.7 158 667-835 141-304 (342)
87 3sgz_A Hydroxyacid oxidase 2; 99.3 5.4E-11 1.8E-15 131.3 18.2 204 7-236 67-305 (352)
88 2qr6_A IMP dehydrogenase/GMP r 99.3 2E-11 6.8E-16 139.2 14.5 206 5-240 63-314 (393)
89 3tdn_A FLR symmetric alpha-bet 99.2 3.2E-12 1.1E-16 136.5 4.3 156 63-248 79-245 (247)
90 4fo4_A Inosine 5'-monophosphat 99.2 7.9E-11 2.7E-15 131.4 13.7 199 10-243 46-251 (366)
91 1vzw_A Phosphoribosyl isomeras 99.2 1.8E-10 6.2E-15 122.5 14.9 157 63-249 75-239 (244)
92 1tv8_A MOAA, molybdenum cofact 99.2 4E-10 1.4E-14 126.1 18.2 178 623-815 20-207 (340)
93 4fxs_A Inosine-5'-monophosphat 99.1 4.5E-10 1.5E-14 131.2 16.4 137 78-241 232-372 (496)
94 3ffs_A Inosine-5-monophosphate 99.1 1.2E-09 3.9E-14 123.0 17.9 202 10-243 42-286 (400)
95 4avf_A Inosine-5'-monophosphat 99.1 1E-09 3.4E-14 128.1 17.6 138 78-242 230-371 (490)
96 2pgw_A Muconate cycloisomerase 99.1 5.9E-10 2E-14 126.7 15.1 149 64-249 137-288 (384)
97 1ka9_F Imidazole glycerol phos 99.1 1.2E-09 4E-14 116.8 15.0 160 63-252 75-245 (252)
98 1thf_D HISF protein; thermophI 99.1 1.1E-09 3.7E-14 117.1 14.7 160 63-252 74-244 (253)
99 1qo2_A Molecule: N-((5-phospho 99.1 6E-10 2.1E-14 118.3 12.1 189 29-248 38-239 (241)
100 2w6r_A Imidazole glycerol phos 99.0 1.6E-09 5.3E-14 116.8 15.3 192 29-250 38-247 (266)
101 2qjg_A Putative aldolase MJ040 99.0 1.2E-09 4.1E-14 118.2 13.9 200 10-247 33-252 (273)
102 1h5y_A HISF; histidine biosynt 99.0 1.9E-09 6.4E-14 114.9 13.5 192 29-250 41-245 (253)
103 1jcn_A Inosine monophosphate d 99.0 2.8E-09 9.5E-14 125.7 15.0 144 72-244 251-399 (514)
104 1y0e_A Putative N-acetylmannos 99.0 3.9E-09 1.3E-13 110.6 14.4 162 65-244 8-215 (223)
105 2c6q_A GMP reductase 2; TIM ba 99.0 1E-08 3.5E-13 114.3 18.3 197 10-240 57-260 (351)
106 1mdl_A Mandelate racemase; iso 98.9 7.9E-09 2.7E-13 116.3 14.5 151 63-249 133-287 (359)
107 2ovl_A Putative racemase; stru 98.9 1E-08 3.5E-13 115.8 14.0 140 74-249 146-289 (371)
108 2rdx_A Mandelate racemase/muco 98.9 1.3E-08 4.4E-13 115.4 14.8 146 64-249 135-284 (379)
109 2nv1_A Pyridoxal biosynthesis 98.9 7.4E-09 2.5E-13 113.7 11.8 170 64-248 22-257 (305)
110 3tdn_A FLR symmetric alpha-bet 98.8 3.1E-09 1.1E-13 113.2 7.9 103 135-249 22-125 (247)
111 3q58_A N-acetylmannosamine-6-p 98.8 4E-08 1.4E-12 102.9 15.0 105 116-244 114-221 (229)
112 1yxy_A Putative N-acetylmannos 98.8 2.1E-08 7.1E-13 105.9 13.0 158 61-240 15-222 (234)
113 2z2u_A UPF0026 protein MJ0257; 98.8 3.1E-08 1.1E-12 109.1 14.2 147 668-830 128-277 (311)
114 2nql_A AGR_PAT_674P, isomerase 98.8 1.8E-08 6.3E-13 114.5 12.5 146 64-247 153-303 (388)
115 2p8b_A Mandelate racemase/muco 98.8 2.7E-08 9.1E-13 112.4 13.3 148 63-247 130-282 (369)
116 2hzg_A Mandelate racemase/muco 98.8 5E-08 1.7E-12 111.4 15.0 152 62-247 132-292 (401)
117 2qdd_A Mandelate racemase/muco 98.8 3.1E-08 1.1E-12 112.2 13.1 147 62-248 133-283 (378)
118 3igs_A N-acetylmannosamine-6-p 98.8 8.9E-08 3.1E-12 100.5 15.3 103 116-242 114-219 (232)
119 1rvk_A Isomerase/lactonizing e 98.7 1.2E-07 4.1E-12 107.6 16.4 144 73-246 148-296 (382)
120 3eez_A Putative mandelate race 98.7 4.3E-08 1.5E-12 110.9 11.8 148 62-249 133-284 (378)
121 1vrd_A Inosine-5'-monophosphat 98.7 5.8E-08 2E-12 114.0 13.3 141 76-244 236-381 (494)
122 1xg4_A Probable methylisocitra 98.7 6.2E-08 2.1E-12 104.5 11.3 200 18-237 21-240 (295)
123 1nu5_A Chloromuconate cycloiso 98.7 1.6E-07 5.6E-12 106.0 15.3 146 65-246 133-283 (370)
124 2qgy_A Enolase from the enviro 98.7 1.7E-07 5.7E-12 106.6 15.2 144 69-248 143-291 (391)
125 2gl5_A Putative dehydratase pr 98.6 1.2E-07 4.1E-12 108.6 13.3 147 63-233 129-300 (410)
126 3usb_A Inosine-5'-monophosphat 98.6 1.3E-07 4.6E-12 110.6 12.8 130 79-242 258-398 (511)
127 3ozy_A Putative mandelate race 98.6 3.5E-07 1.2E-11 103.8 15.7 147 64-247 139-292 (389)
128 2ps2_A Putative mandelate race 98.6 2.2E-07 7.6E-12 104.9 14.0 145 62-246 134-283 (371)
129 1tkk_A Similar to chloromucona 98.6 3E-07 1E-11 103.7 14.9 147 64-246 130-282 (366)
130 2a5h_A L-lysine 2,3-aminomutas 98.6 2.8E-07 9.7E-12 105.4 14.6 171 624-814 122-302 (416)
131 1wa3_A 2-keto-3-deoxy-6-phosph 98.6 2E-07 7E-12 96.1 11.0 149 63-240 9-185 (205)
132 2poz_A Putative dehydratase; o 98.6 2.2E-07 7.5E-12 105.8 11.9 140 72-232 135-280 (392)
133 1qo2_A Molecule: N-((5-phospho 98.5 3.4E-08 1.2E-12 104.6 4.3 102 135-248 13-117 (241)
134 1geq_A Tryptophan synthase alp 98.5 6E-07 2.1E-11 95.4 13.7 167 63-238 4-226 (248)
135 2ox4_A Putative mandelate race 98.5 5.6E-07 1.9E-11 102.8 12.9 134 74-231 146-289 (403)
136 1wv2_A Thiazole moeity, thiazo 98.5 1.5E-05 5E-10 82.8 22.0 204 3-240 13-226 (265)
137 1xm3_A Thiazole biosynthesis p 98.5 3.4E-06 1.2E-10 90.3 17.7 204 2-241 5-216 (264)
138 2oz8_A MLL7089 protein; struct 98.5 2.3E-06 7.9E-11 97.1 17.3 123 74-232 145-273 (389)
139 2og9_A Mandelate racemase/muco 98.5 7.2E-07 2.4E-11 101.5 13.1 123 74-232 162-288 (393)
140 2zbt_A Pyridoxal biosynthesis 98.5 1.4E-06 4.8E-11 95.2 14.5 155 63-239 21-245 (297)
141 2qde_A Mandelate racemase/muco 98.4 1E-06 3.6E-11 100.3 13.8 131 64-231 135-269 (397)
142 2qq6_A Mandelate racemase/muco 98.4 9.2E-07 3.1E-11 101.2 13.3 132 74-231 149-290 (410)
143 2pp0_A L-talarate/galactarate 98.4 1.5E-06 5.3E-11 98.8 13.5 122 74-231 175-300 (398)
144 3stp_A Galactonate dehydratase 98.4 2E-06 7E-11 98.0 13.7 153 62-244 166-323 (412)
145 2o56_A Putative mandelate race 98.4 1.8E-06 6.2E-11 98.7 13.2 135 74-232 152-296 (407)
146 2uva_G Fatty acid synthase bet 98.4 1.7E-06 5.8E-11 115.0 14.3 200 10-240 582-803 (2060)
147 2v82_A 2-dehydro-3-deoxy-6-pho 98.4 3.4E-06 1.2E-10 87.3 13.9 135 62-238 5-182 (212)
148 3rcy_A Mandelate racemase/muco 98.3 2.8E-06 9.6E-11 97.5 13.8 149 73-246 145-298 (433)
149 2gdq_A YITF; mandelate racemas 98.3 1.9E-06 6.5E-11 97.6 12.1 123 73-231 135-265 (382)
150 2zad_A Muconate cycloisomerase 98.3 7.1E-06 2.4E-10 91.6 16.3 130 64-231 129-264 (345)
151 4adt_A Pyridoxine biosynthetic 98.3 7.3E-06 2.5E-10 88.5 15.5 144 80-242 32-248 (297)
152 4gj1_A 1-(5-phosphoribosyl)-5- 98.3 6.7E-06 2.3E-10 86.9 14.9 155 63-247 73-239 (243)
153 1rd5_A Tryptophan synthase alp 98.3 3.8E-06 1.3E-10 90.0 13.1 170 63-236 17-234 (262)
154 3bjs_A Mandelate racemase/muco 98.3 2.5E-06 8.6E-11 97.9 12.0 124 72-232 182-311 (428)
155 3sjn_A Mandelate racemase/muco 98.3 2.6E-06 9E-11 96.1 11.8 130 74-236 146-279 (374)
156 1thf_D HISF protein; thermophI 98.3 7.4E-07 2.5E-11 95.0 6.6 89 151-249 31-120 (253)
157 1qop_A Tryptophan synthase alp 98.3 6.2E-06 2.1E-10 88.6 13.4 166 63-237 16-239 (268)
158 3rr1_A GALD, putative D-galact 98.2 5.5E-06 1.9E-10 94.2 13.5 150 61-238 112-265 (405)
159 3i4k_A Muconate lactonizing en 98.2 1.7E-05 5.9E-10 89.7 16.6 148 64-247 138-290 (383)
160 3sbf_A Mandelate racemase / mu 98.2 5.4E-06 1.8E-10 94.4 12.3 164 62-246 121-296 (401)
161 1ka9_F Imidazole glycerol phos 98.2 1.2E-06 4.1E-11 93.3 6.4 89 151-249 32-121 (252)
162 4e5t_A Mandelate racemase / mu 98.2 7.2E-06 2.5E-10 93.4 13.3 150 73-247 150-304 (404)
163 3vk5_A MOEO5; TIM barrel, tran 98.2 2E-05 6.8E-10 83.1 15.4 160 74-248 51-274 (286)
164 2hxt_A L-fuconate dehydratase; 98.2 6.3E-06 2.1E-10 95.1 12.3 127 72-234 196-326 (441)
165 1tzz_A Hypothetical protein L1 98.2 1E-05 3.5E-10 91.9 13.7 136 74-245 165-308 (392)
166 3vnd_A TSA, tryptophan synthas 98.2 1.7E-05 5.9E-10 84.5 14.0 166 62-236 16-239 (267)
167 3r4e_A Mandelate racemase/muco 98.1 5E-06 1.7E-10 95.1 10.2 161 62-246 131-315 (418)
168 4dwd_A Mandelate racemase/muco 98.1 3.2E-05 1.1E-09 87.6 16.3 155 61-245 123-284 (393)
169 3nav_A Tryptophan synthase alp 98.1 7.4E-06 2.5E-10 87.4 10.2 167 63-236 19-241 (271)
170 3ro6_B Putative chloromuconate 98.1 9.7E-06 3.3E-10 90.8 11.5 135 63-234 129-268 (356)
171 4e4u_A Mandalate racemase/muco 98.1 1.7E-05 5.6E-10 90.6 13.4 150 72-246 142-296 (412)
172 3vzx_A Heptaprenylglyceryl pho 98.1 5.2E-05 1.8E-09 78.4 15.4 60 190-249 166-225 (228)
173 3jva_A Dipeptide epimerase; en 98.1 2.5E-05 8.7E-10 87.3 14.0 145 65-246 130-278 (354)
174 3f4w_A Putative hexulose 6 pho 98.1 3.2E-05 1.1E-09 79.9 13.6 148 63-246 53-201 (211)
175 1ofd_A Ferredoxin-dependent gl 98.1 2.5E-05 8.7E-10 99.1 15.1 117 115-239 1010-1135(1520)
176 1zfj_A Inosine monophosphate d 98.1 3.9E-05 1.3E-09 89.8 15.9 132 78-243 234-376 (491)
177 3tji_A Mandelate racemase/muco 98.0 1.2E-05 4.3E-10 91.8 11.1 165 62-247 142-318 (422)
178 3rfa_A Ribosomal RNA large sub 98.0 9.9E-05 3.4E-09 83.2 18.0 203 624-843 122-340 (404)
179 1sjd_A N-acylamino acid racema 98.0 1.8E-05 6.1E-10 89.1 12.0 127 65-231 131-262 (368)
180 2y88_A Phosphoribosyl isomeras 98.0 4.4E-06 1.5E-10 88.4 6.5 87 152-249 33-120 (244)
181 1h5y_A HISF; histidine biosynt 98.0 4.5E-06 1.6E-10 88.5 6.4 88 151-248 34-122 (253)
182 3ddm_A Putative mandelate race 98.0 1.7E-05 5.9E-10 89.8 11.3 124 72-232 153-281 (392)
183 1vzw_A Phosphoribosyl isomeras 98.0 6E-06 2E-10 87.4 7.0 86 152-248 34-120 (244)
184 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 1.9E-05 6.3E-10 81.3 10.4 149 63-240 12-186 (207)
185 3my9_A Muconate cycloisomerase 98.0 6.2E-05 2.1E-09 84.9 14.5 133 64-232 136-272 (377)
186 4af0_A Inosine-5'-monophosphat 97.9 0.00034 1.2E-08 80.0 19.9 137 72-237 277-418 (556)
187 1viz_A PCRB protein homolog; s 97.9 2.2E-05 7.7E-10 82.1 9.3 154 78-247 22-226 (240)
188 3gd6_A Muconate cycloisomerase 97.9 6.6E-05 2.3E-09 85.1 13.8 147 62-247 126-283 (391)
189 3tj4_A Mandelate racemase; eno 97.9 5.9E-05 2E-09 84.9 13.3 124 73-232 150-278 (372)
190 2p10_A MLL9387 protein; putati 97.9 1.3E-05 4.6E-10 84.1 7.3 168 56-239 88-266 (286)
191 2ekc_A AQ_1548, tryptophan syn 97.9 0.00012 4.1E-09 78.2 14.9 166 65-238 18-240 (262)
192 3toy_A Mandelate racemase/muco 97.9 0.00011 3.8E-09 82.9 15.0 137 62-234 155-296 (383)
193 3ovp_A Ribulose-phosphate 3-ep 97.9 0.00016 5.5E-09 75.4 15.1 157 64-245 5-210 (228)
194 3ugv_A Enolase; enzyme functio 97.9 7.7E-05 2.6E-09 84.4 13.3 133 63-231 157-299 (390)
195 1rpx_A Protein (ribulose-phosp 97.8 7E-05 2.4E-09 78.4 11.6 160 65-246 12-221 (230)
196 3i6e_A Muconate cycloisomerase 97.8 0.00018 6.1E-09 81.3 15.7 134 63-232 137-273 (385)
197 3dg3_A Muconate cycloisomerase 97.8 0.00014 4.7E-09 81.7 14.7 132 63-231 128-265 (367)
198 3can_A Pyruvate-formate lyase- 97.8 0.00056 1.9E-08 68.6 17.8 133 669-811 5-141 (182)
199 3q45_A Mandelate racemase/muco 97.8 0.00017 5.7E-09 81.1 15.2 145 65-246 131-279 (368)
200 1tqj_A Ribulose-phosphate 3-ep 97.8 6.6E-05 2.3E-09 78.6 10.9 160 66-247 7-216 (230)
201 1r0m_A N-acylamino acid racema 97.8 5.3E-05 1.8E-09 85.4 10.8 126 66-231 139-268 (375)
202 3qja_A IGPS, indole-3-glycerol 97.8 0.00047 1.6E-08 73.7 17.6 145 63-249 113-259 (272)
203 3fv9_G Mandelate racemase/muco 97.8 0.00021 7.3E-09 80.7 15.4 138 61-233 132-274 (386)
204 3vcn_A Mannonate dehydratase; 97.8 7.2E-05 2.5E-09 85.6 11.5 161 62-246 138-322 (425)
205 3v3w_A Starvation sensing prot 97.8 9.4E-05 3.2E-09 84.6 12.4 162 62-247 137-322 (424)
206 3ngj_A Deoxyribose-phosphate a 97.8 0.00022 7.7E-09 73.9 13.6 184 15-233 36-230 (239)
207 3tsm_A IGPS, indole-3-glycerol 97.8 0.00052 1.8E-08 73.1 16.7 147 63-251 120-268 (272)
208 2w6r_A Imidazole glycerol phos 97.8 5.6E-05 1.9E-09 81.0 9.3 86 152-247 32-121 (266)
209 2zc8_A N-acylamino acid racema 97.7 8.5E-05 2.9E-09 83.6 11.0 127 65-231 131-261 (369)
210 1chr_A Chloromuconate cycloiso 97.7 0.00038 1.3E-08 78.2 16.3 141 64-240 132-277 (370)
211 2fli_A Ribulose-phosphate 3-ep 97.7 0.00012 4.1E-09 75.9 11.3 157 66-245 6-211 (220)
212 3r0u_A Enzyme of enolase super 97.7 0.00028 9.6E-09 79.4 15.1 134 62-232 130-269 (379)
213 3oa3_A Aldolase; structural ge 97.7 0.00041 1.4E-08 73.8 15.3 138 73-233 123-264 (288)
214 1w8s_A FBP aldolase, fructose- 97.7 0.00057 2E-08 72.8 16.6 135 80-246 96-245 (263)
215 3t6c_A RSPA, putative MAND fam 97.7 0.00017 5.9E-09 82.8 13.3 165 62-247 143-336 (440)
216 3w01_A Heptaprenylglyceryl pho 97.7 0.00012 4E-09 75.9 10.5 143 84-247 31-229 (235)
217 3go2_A Putative L-alanine-DL-g 97.7 0.00028 9.7E-09 80.3 14.9 136 73-231 142-291 (409)
218 1ujp_A Tryptophan synthase alp 97.7 0.00017 5.8E-09 77.2 12.1 162 66-238 18-235 (271)
219 3mqt_A Mandelate racemase/muco 97.7 0.00029 1E-08 79.8 14.4 152 62-246 131-296 (394)
220 1yad_A Regulatory protein TENI 97.7 0.00024 8.1E-09 73.8 12.6 83 156-246 123-206 (221)
221 3tcs_A Racemase, putative; PSI 97.7 0.00039 1.3E-08 78.5 15.3 145 73-246 145-294 (388)
222 1h1y_A D-ribulose-5-phosphate 97.7 0.00035 1.2E-08 73.0 13.5 148 63-245 64-214 (228)
223 3p3b_A Mandelate racemase/muco 97.7 6.5E-05 2.2E-09 85.2 8.6 128 72-231 139-284 (392)
224 2uv8_G Fatty acid synthase sub 97.7 0.00018 6.1E-09 95.4 13.4 209 10-249 589-821 (2051)
225 1ea0_A Glutamate synthase [NAD 97.6 0.0001 3.5E-09 93.5 9.8 114 116-237 976-1098(1479)
226 3inp_A D-ribulose-phosphate 3- 97.6 0.00042 1.4E-08 72.8 12.9 157 64-245 28-236 (246)
227 2htm_A Thiazole biosynthesis p 97.6 0.0028 9.6E-08 66.1 18.7 201 3-237 6-212 (268)
228 4e4f_A Mannonate dehydratase; 97.6 0.00023 7.8E-09 81.4 11.5 164 62-246 137-323 (426)
229 1me8_A Inosine-5'-monophosphat 97.6 0.00036 1.2E-08 81.6 13.4 135 77-238 242-387 (503)
230 3cwo_X Beta/alpha-barrel prote 97.6 0.00019 6.5E-09 74.6 10.0 91 152-252 132-223 (237)
231 3ndo_A Deoxyribose-phosphate a 97.6 0.00033 1.1E-08 72.5 11.1 136 74-230 78-217 (231)
232 3mkc_A Racemase; metabolic pro 97.6 0.00038 1.3E-08 78.9 12.8 137 77-246 160-301 (394)
233 3mwc_A Mandelate racemase/muco 97.6 0.00029 1E-08 79.9 11.8 136 63-238 149-291 (400)
234 4e8g_A Enolase, mandelate race 97.6 0.00045 1.6E-08 78.1 13.3 132 64-234 154-290 (391)
235 2qr6_A IMP dehydrogenase/GMP r 97.5 0.0003 1E-08 79.7 11.5 102 116-235 140-242 (393)
236 3r12_A Deoxyribose-phosphate a 97.5 0.0015 5.3E-08 68.4 15.6 132 74-230 109-243 (260)
237 2f6u_A GGGPS, (S)-3-O-geranylg 97.5 0.00031 1.1E-08 73.0 10.0 146 79-241 23-227 (234)
238 3tha_A Tryptophan synthase alp 97.5 0.00011 3.8E-09 77.1 6.3 168 63-236 13-231 (252)
239 3dgb_A Muconate cycloisomerase 97.5 0.0011 3.6E-08 74.9 14.9 133 64-232 138-275 (382)
240 1ub3_A Aldolase protein; schif 97.5 0.0011 3.8E-08 68.3 13.4 136 74-235 69-210 (220)
241 1i4n_A Indole-3-glycerol phosp 97.4 0.0016 5.5E-08 68.4 14.2 145 63-249 101-247 (251)
242 3zen_D Fatty acid synthase; tr 97.4 0.00032 1.1E-08 96.4 11.1 195 10-240 427-654 (3089)
243 1xi3_A Thiamine phosphate pyro 97.4 0.0013 4.5E-08 67.6 13.4 83 156-246 121-204 (215)
244 3glc_A Aldolase LSRF; TIM barr 97.4 0.0015 5.1E-08 70.4 14.1 169 63-269 105-291 (295)
245 3ctl_A D-allulose-6-phosphate 97.4 0.0015 5E-08 68.2 13.6 149 66-240 3-204 (231)
246 1vc4_A Indole-3-glycerol phosp 97.4 0.0012 4.1E-08 69.9 13.0 142 63-247 106-251 (254)
247 4gj1_A 1-(5-phosphoribosyl)-5- 97.4 0.00047 1.6E-08 72.7 9.7 88 152-249 33-121 (243)
248 3fcp_A L-Ala-D/L-Glu epimerase 97.4 0.0018 6.3E-08 72.9 15.0 134 64-233 137-275 (381)
249 3ajx_A 3-hexulose-6-phosphate 97.3 0.0032 1.1E-07 64.4 15.1 144 63-245 53-199 (207)
250 2tps_A Protein (thiamin phosph 97.3 0.00092 3.2E-08 69.5 11.0 84 156-245 129-213 (227)
251 4hnl_A Mandelate racemase/muco 97.2 0.0012 3.9E-08 75.6 11.8 149 62-231 141-301 (421)
252 4a35_A Mitochondrial enolase s 97.2 0.0034 1.2E-07 72.0 14.5 139 72-247 199-344 (441)
253 3ik4_A Mandelate racemase/muco 97.2 0.0034 1.2E-07 70.3 14.2 132 64-231 133-269 (365)
254 3dip_A Enolase; structural gen 97.1 0.0014 4.8E-08 74.5 11.0 135 79-237 161-300 (410)
255 4e38_A Keto-hydroxyglutarate-a 97.0 0.0037 1.3E-07 64.8 11.9 142 64-236 34-206 (232)
256 1vhc_A Putative KHG/KDPG aldol 97.0 0.0034 1.2E-07 65.1 11.6 148 63-241 16-194 (224)
257 1pii_A N-(5'phosphoribosyl)ant 97.0 0.012 4.2E-07 67.0 16.8 147 63-251 108-255 (452)
258 1n7k_A Deoxyribose-phosphate a 97.0 0.0056 1.9E-07 63.5 12.8 182 15-234 29-225 (234)
259 3lab_A Putative KDPG (2-keto-3 97.0 0.004 1.4E-07 63.6 11.4 152 62-241 11-195 (217)
260 3o63_A Probable thiamine-phosp 97.0 0.0053 1.8E-07 64.4 12.7 84 156-246 148-233 (243)
261 1tqx_A D-ribulose-5-phosphate 96.9 0.033 1.1E-06 57.7 18.0 166 63-245 5-214 (227)
262 4eiv_A Deoxyribose-phosphate a 96.9 0.0038 1.3E-07 66.0 10.8 130 73-225 97-253 (297)
263 4dye_A Isomerase; enolase fami 96.9 0.0053 1.8E-07 69.4 12.8 120 75-233 169-292 (398)
264 1wbh_A KHG/KDPG aldolase; lyas 96.8 0.0086 2.9E-07 61.6 12.1 148 63-241 15-193 (214)
265 1p1x_A Deoxyribose-phosphate a 96.7 0.0075 2.6E-07 63.5 11.5 130 74-227 83-222 (260)
266 3ih1_A Methylisocitrate lyase; 96.7 0.011 3.8E-07 63.7 13.0 193 19-237 34-248 (305)
267 1o66_A 3-methyl-2-oxobutanoate 96.7 0.028 9.7E-07 59.3 15.7 153 18-211 21-203 (275)
268 2hjp_A Phosphonopyruvate hydro 96.7 0.017 5.9E-07 61.9 14.0 196 18-236 19-239 (290)
269 2cu0_A Inosine-5'-monophosphat 96.7 0.0057 2E-07 71.2 11.0 129 79-238 230-363 (486)
270 2pge_A MENC; OSBS, NYSGXRC, PS 96.6 0.015 5E-07 65.4 13.9 132 64-231 152-290 (377)
271 1to3_A Putative aldolase YIHT; 96.6 0.018 6.2E-07 62.5 13.9 133 80-238 112-260 (304)
272 2a4a_A Deoxyribose-phosphate a 96.6 0.012 4.1E-07 62.5 11.9 129 74-227 104-249 (281)
273 1wuf_A Hypothetical protein LI 96.6 0.0056 1.9E-07 69.2 10.1 127 65-231 151-281 (393)
274 1mxs_A KDPG aldolase; 2-keto-3 96.6 0.0032 1.1E-07 65.3 7.3 149 63-241 25-203 (225)
275 3lye_A Oxaloacetate acetyl hyd 96.5 0.025 8.4E-07 61.0 13.9 196 19-237 30-252 (307)
276 3eoo_A Methylisocitrate lyase; 96.5 0.0092 3.1E-07 64.2 10.3 194 20-237 28-244 (298)
277 1oy0_A Ketopantoate hydroxymet 96.5 0.042 1.4E-06 58.2 15.0 153 19-212 39-222 (281)
278 3b8i_A PA4872 oxaloacetate dec 96.4 0.032 1.1E-06 59.7 14.0 191 18-234 25-236 (287)
279 2ze3_A DFA0005; organic waste 96.4 0.053 1.8E-06 57.7 15.6 186 18-235 20-235 (275)
280 1zlp_A PSR132, petal death pro 96.4 0.03 1E-06 60.7 13.7 195 18-236 43-261 (318)
281 1s2w_A Phosphoenolpyruvate pho 96.4 0.046 1.6E-06 58.8 15.1 196 18-236 23-242 (295)
282 3ceu_A Thiamine phosphate pyro 96.4 0.017 5.7E-07 59.3 11.2 137 80-239 17-179 (210)
283 4dxk_A Mandelate racemase / mu 96.4 0.011 3.8E-07 66.9 10.7 132 79-234 157-293 (400)
284 2h6r_A Triosephosphate isomera 96.3 0.035 1.2E-06 57.2 13.4 136 83-247 76-214 (219)
285 3o1n_A 3-dehydroquinate dehydr 96.3 0.1 3.5E-06 55.7 17.2 103 59-172 35-142 (276)
286 1jvn_A Glutamine, bifunctional 96.3 0.0042 1.5E-07 73.3 6.9 83 150-239 280-374 (555)
287 3cu2_A Ribulose-5-phosphate 3- 96.3 0.012 4.1E-07 61.4 9.4 150 65-238 15-223 (237)
288 1vcv_A Probable deoxyribose-ph 96.2 0.058 2E-06 55.6 13.9 181 15-227 10-207 (226)
289 4a29_A Engineered retro-aldol 96.1 0.07 2.4E-06 55.5 14.0 122 87-246 124-247 (258)
290 1m3u_A 3-methyl-2-oxobutanoate 96.1 0.043 1.5E-06 57.6 12.6 155 18-212 21-204 (264)
291 3u9i_A Mandelate racemase/muco 96.0 0.021 7.2E-07 64.4 10.3 140 65-231 156-299 (393)
292 2agk_A 1-(5-phosphoribosyl)-5- 95.9 0.0058 2E-07 64.9 5.0 80 152-249 40-125 (260)
293 2yci_X 5-methyltetrahydrofolat 95.9 0.046 1.6E-06 58.1 12.0 97 74-210 32-131 (271)
294 2czd_A Orotidine 5'-phosphate 95.9 0.094 3.2E-06 53.5 14.0 131 68-241 58-194 (208)
295 3s5s_A Mandelate racemase/muco 95.9 0.031 1.1E-06 63.0 11.0 132 65-231 135-270 (389)
296 2qiw_A PEP phosphonomutase; st 95.8 0.1 3.6E-06 54.8 14.2 182 18-234 24-238 (255)
297 1q6o_A Humps, 3-keto-L-gulonat 95.8 0.043 1.5E-06 56.4 11.1 138 64-240 57-199 (216)
298 3jr2_A Hexulose-6-phosphate sy 95.8 0.013 4.4E-07 60.5 7.0 140 63-240 59-202 (218)
299 2ozt_A TLR1174 protein; struct 95.8 0.09 3.1E-06 57.8 14.2 123 73-231 115-244 (332)
300 3fa4_A 2,3-dimethylmalate lyas 95.7 0.066 2.3E-06 57.5 12.3 195 20-236 24-243 (302)
301 4h83_A Mandelate racemase/muco 95.5 0.044 1.5E-06 61.7 10.7 125 72-231 162-290 (388)
302 3kts_A Glycerol uptake operon 95.5 0.033 1.1E-06 55.7 8.3 69 153-239 117-186 (192)
303 4fo4_A Inosine 5'-monophosphat 95.5 0.07 2.4E-06 59.3 11.7 97 116-232 80-177 (366)
304 2chr_A Chloromuconate cycloiso 95.4 0.16 5.5E-06 56.7 14.8 129 67-231 135-268 (370)
305 4h1z_A Enolase Q92ZS5; dehydra 95.3 0.11 3.6E-06 59.1 12.9 122 72-230 186-311 (412)
306 2yr1_A 3-dehydroquinate dehydr 95.3 0.91 3.1E-05 47.7 19.1 100 63-173 19-124 (257)
307 3lab_A Putative KDPG (2-keto-3 95.3 0.057 2E-06 55.1 9.3 111 133-267 13-128 (217)
308 3vav_A 3-methyl-2-oxobutanoate 95.2 0.37 1.3E-05 50.8 15.5 153 19-211 34-215 (275)
309 3va8_A Probable dehydratase; e 95.1 0.098 3.3E-06 59.8 11.8 120 73-231 190-313 (445)
310 4h3d_A 3-dehydroquinate dehydr 95.1 0.67 2.3E-05 48.8 17.4 98 63-171 18-121 (258)
311 3vdg_A Probable glucarate dehy 95.0 0.13 4.3E-06 58.9 12.5 120 73-231 192-315 (445)
312 1m3u_A 3-methyl-2-oxobutanoate 95.0 0.32 1.1E-05 51.1 14.4 119 63-209 16-135 (264)
313 1o66_A 3-methyl-2-oxobutanoate 95.0 0.25 8.4E-06 52.1 13.5 123 63-212 16-139 (275)
314 3khj_A Inosine-5-monophosphate 94.9 0.1 3.6E-06 57.9 11.1 95 116-233 79-174 (361)
315 3qld_A Mandelate racemase/muco 94.8 0.17 5.9E-06 56.8 12.8 130 62-231 136-269 (388)
316 3r2g_A Inosine 5'-monophosphat 94.8 0.042 1.4E-06 60.8 7.4 69 151-232 100-169 (361)
317 3iv3_A Tagatose 1,6-diphosphat 94.8 0.28 9.6E-06 53.3 13.7 145 81-238 115-286 (332)
318 3cyj_A Mandelate racemase/muco 94.8 0.35 1.2E-05 53.9 15.1 121 74-231 144-269 (372)
319 4fhd_A Spore photoproduct lyas 94.7 0.083 2.8E-06 58.4 9.4 164 624-793 114-282 (368)
320 1wue_A Mandelate racemase/muco 94.7 0.11 3.9E-06 58.2 10.8 127 65-231 151-281 (386)
321 4hpn_A Putative uncharacterize 94.7 0.19 6.4E-06 56.3 12.5 120 75-231 145-268 (378)
322 1f6y_A 5-methyltetrahydrofolat 94.6 0.26 8.9E-06 52.1 12.8 97 73-209 22-121 (262)
323 3vav_A 3-methyl-2-oxobutanoate 94.6 0.64 2.2E-05 49.0 15.3 124 58-210 23-148 (275)
324 3ih1_A Methylisocitrate lyase; 94.4 0.21 7.2E-06 53.8 11.6 175 58-249 23-210 (305)
325 3vc5_A Mandelate racemase/muco 94.4 0.2 6.8E-06 57.2 12.2 120 73-231 187-310 (441)
326 4e38_A Keto-hydroxyglutarate-a 94.4 0.25 8.7E-06 51.0 11.7 118 122-268 26-144 (232)
327 1ypf_A GMP reductase; GUAC, pu 94.1 0.17 6E-06 55.6 10.5 95 117-232 80-177 (336)
328 3qja_A IGPS, indole-3-glycerol 94.0 0.099 3.4E-06 55.6 7.9 75 152-239 74-149 (272)
329 3eoo_A Methylisocitrate lyase; 94.0 0.93 3.2E-05 48.6 15.4 157 81-249 34-206 (298)
330 1sfl_A 3-dehydroquinate dehydr 94.0 0.7 2.4E-05 48.0 14.2 96 65-172 5-106 (238)
331 3exr_A RMPD (hexulose-6-phosph 94.0 0.24 8.1E-06 51.0 10.5 142 63-241 58-205 (221)
332 3ijl_A Muconate cycloisomerase 93.8 0.26 8.9E-06 54.2 11.2 124 69-231 129-252 (338)
333 3tsm_A IGPS, indole-3-glycerol 93.8 0.14 4.6E-06 54.4 8.5 73 152-237 81-154 (272)
334 1vc4_A Indole-3-glycerol phosp 93.8 0.17 5.7E-06 53.3 9.2 73 152-237 67-140 (254)
335 3m47_A Orotidine 5'-phosphate 93.6 0.83 2.8E-05 47.2 13.8 143 63-243 64-213 (228)
336 3ve9_A Orotidine-5'-phosphate 93.5 0.28 9.4E-06 50.2 9.9 140 63-245 50-193 (215)
337 1h1y_A D-ribulose-5-phosphate 93.5 0.32 1.1E-05 50.2 10.6 133 63-232 6-145 (228)
338 3p0w_A Mandelate racemase/muco 93.4 0.23 8E-06 57.1 10.2 121 72-229 198-326 (470)
339 3igs_A N-acetylmannosamine-6-p 93.3 0.67 2.3E-05 48.0 12.6 109 117-247 4-123 (232)
340 3mzn_A Glucarate dehydratase; 93.3 0.34 1.1E-05 55.5 11.2 121 72-229 180-308 (450)
341 4af0_A Inosine-5'-monophosphat 93.3 0.17 5.7E-06 58.1 8.4 71 151-234 281-352 (556)
342 4h2h_A Mandelate racemase/muco 93.2 0.56 1.9E-05 52.4 12.8 130 63-231 139-273 (376)
343 1r7j_A Conserved hypothetical 93.1 0.34 1.2E-05 42.7 8.6 52 898-949 19-70 (95)
344 4aaj_A N-(5'-phosphoribosyl)an 92.9 1.7 6E-05 44.7 14.9 133 65-236 72-206 (228)
345 1xg4_A Probable methylisocitra 92.9 1.2 4.1E-05 47.7 14.2 168 70-249 22-202 (295)
346 3ru6_A Orotidine 5'-phosphate 92.8 1.5 5E-05 47.1 14.5 151 63-250 76-251 (303)
347 1oy0_A Ketopantoate hydroxymet 92.6 1.3 4.4E-05 46.8 13.6 122 60-208 30-153 (281)
348 2ze3_A DFA0005; organic waste 92.6 0.56 1.9E-05 49.8 11.0 155 81-249 28-203 (275)
349 2hjp_A Phosphonopyruvate hydro 92.6 0.52 1.8E-05 50.4 10.7 163 81-250 27-203 (290)
350 2vc6_A MOSA, dihydrodipicolina 92.4 0.77 2.6E-05 49.3 12.0 127 73-224 18-152 (292)
351 4fxs_A Inosine-5'-monophosphat 92.3 0.24 8E-06 57.5 8.2 69 153-234 233-302 (496)
352 2opj_A O-succinylbenzoate-COA 92.3 0.31 1.1E-05 53.3 8.8 128 65-231 71-202 (327)
353 1zlp_A PSR132, petal death pro 92.2 1.4 4.6E-05 47.7 13.4 179 57-249 32-224 (318)
354 2b7n_A Probable nicotinate-nuc 92.1 0.36 1.2E-05 51.4 8.8 94 121-241 169-266 (273)
355 2vef_A Dihydropteroate synthas 92.1 0.33 1.1E-05 52.5 8.6 80 74-171 31-114 (314)
356 4avf_A Inosine-5'-monophosphat 92.0 0.22 7.6E-06 57.6 7.6 70 152-234 230-300 (490)
357 2gjl_A Hypothetical protein PA 91.9 0.99 3.4E-05 49.3 12.4 95 115-233 50-147 (328)
358 2r8w_A AGR_C_1641P; APC7498, d 91.9 1.2 4.2E-05 48.6 13.0 127 73-224 52-186 (332)
359 3d0c_A Dihydrodipicolinate syn 91.8 0.94 3.2E-05 49.2 11.8 125 73-224 30-159 (314)
360 1qap_A Quinolinic acid phospho 91.8 0.64 2.2E-05 49.9 10.2 91 120-240 195-288 (296)
361 3q58_A N-acetylmannosamine-6-p 91.7 1.6 5.5E-05 45.0 12.9 107 118-246 5-122 (229)
362 1rvg_A Fructose-1,6-bisphospha 91.7 2.1 7E-05 45.9 13.9 109 111-225 106-223 (305)
363 3l21_A DHDPS, dihydrodipicolin 91.7 0.87 3E-05 49.2 11.3 127 73-224 33-167 (304)
364 1p4c_A L(+)-mandelate dehydrog 91.6 0.057 1.9E-06 60.6 1.9 44 187-232 209-253 (380)
365 3q94_A Fructose-bisphosphate a 91.5 1.5 5E-05 46.8 12.5 120 107-234 110-238 (288)
366 2x4h_A Hypothetical protein SS 91.5 0.74 2.5E-05 43.1 9.4 65 887-951 19-83 (139)
367 2yxg_A DHDPS, dihydrodipicolin 91.5 1 3.5E-05 48.2 11.6 126 73-223 18-151 (289)
368 3tr9_A Dihydropteroate synthas 91.5 0.37 1.3E-05 51.9 8.0 85 73-168 46-130 (314)
369 1xky_A Dihydrodipicolinate syn 91.5 0.96 3.3E-05 48.8 11.4 127 73-224 30-164 (301)
370 3v5c_A Mandelate racemase/muco 91.4 0.51 1.7E-05 53.0 9.4 127 75-231 149-284 (392)
371 3pfr_A Mandelate racemase/muco 91.3 0.8 2.8E-05 52.4 11.1 120 73-229 184-311 (455)
372 3m5v_A DHDPS, dihydrodipicolin 91.2 1.2 4E-05 48.1 11.8 128 73-225 25-161 (301)
373 3e96_A Dihydrodipicolinate syn 91.2 1.3 4.5E-05 48.1 12.2 126 73-224 30-159 (316)
374 2ehh_A DHDPS, dihydrodipicolin 91.1 1.8 6.3E-05 46.4 13.2 126 73-223 18-151 (294)
375 1zfj_A Inosine monophosphate d 91.1 0.69 2.4E-05 53.6 10.6 70 152-234 234-304 (491)
376 1p0k_A Isopentenyl-diphosphate 91.0 8.1 0.00028 42.3 18.6 143 63-232 55-209 (349)
377 3flu_A DHDPS, dihydrodipicolin 91.0 1.1 3.9E-05 48.1 11.4 127 73-224 25-159 (297)
378 3qze_A DHDPS, dihydrodipicolin 91.0 1 3.5E-05 48.9 11.1 127 73-224 41-175 (314)
379 1o5k_A DHDPS, dihydrodipicolin 91.0 1.5 5.1E-05 47.4 12.3 126 73-223 30-163 (306)
380 2wkj_A N-acetylneuraminate lya 91.0 1.6 5.6E-05 47.0 12.6 128 73-224 29-164 (303)
381 2isw_A Putative fructose-1,6-b 90.9 1.5 5.2E-05 47.3 12.0 141 63-225 75-225 (323)
382 3na8_A Putative dihydrodipicol 90.9 0.93 3.2E-05 49.2 10.6 128 73-225 42-177 (315)
383 3iwp_A Copper homeostasis prot 90.8 5.7 0.00019 42.0 16.0 138 65-231 39-185 (287)
384 3hrs_A Metalloregulator SCAR; 90.8 0.7 2.4E-05 47.2 9.1 67 885-951 6-73 (214)
385 3f4w_A Putative hexulose 6 pho 90.8 2.3 7.8E-05 42.9 13.0 128 66-233 3-135 (211)
386 2qiw_A PEP phosphonomutase; st 90.7 0.63 2.1E-05 48.9 8.7 151 81-249 32-203 (255)
387 3bo9_A Putative nitroalkan dio 90.7 1.5 5E-05 47.9 12.1 91 116-233 61-153 (326)
388 3b4u_A Dihydrodipicolinate syn 90.7 1 3.5E-05 48.3 10.7 128 73-223 21-158 (294)
389 1tbx_A ORF F-93, hypothetical 90.7 0.49 1.7E-05 41.6 6.8 60 894-953 17-84 (99)
390 3tak_A DHDPS, dihydrodipicolin 90.7 1.1 3.9E-05 47.9 11.0 127 73-224 19-153 (291)
391 3nl6_A Thiamine biosynthetic b 90.7 0.36 1.2E-05 56.5 7.4 83 156-244 121-221 (540)
392 1jpd_X L-Ala-D/L-Glu epimerase 90.6 0.73 2.5E-05 50.3 9.6 122 69-231 127-249 (324)
393 2v9d_A YAGE; dihydrodipicolini 90.5 1 3.6E-05 49.4 10.7 126 73-223 49-182 (343)
394 3si9_A DHDPS, dihydrodipicolin 90.5 1 3.6E-05 48.8 10.6 127 73-224 40-174 (315)
395 3cpr_A Dihydrodipicolinate syn 90.4 1.6 5.5E-05 47.0 12.0 127 73-224 34-168 (304)
396 3k13_A 5-methyltetrahydrofolat 90.4 1.2 4.1E-05 47.8 10.7 101 74-209 35-138 (300)
397 3n9r_A Fructose-bisphosphate a 90.3 2.3 7.9E-05 45.5 12.7 143 62-225 73-225 (307)
398 1f6k_A N-acetylneuraminate lya 90.3 1.3 4.4E-05 47.5 11.0 127 73-224 21-156 (293)
399 2qvo_A Uncharacterized protein 90.2 0.47 1.6E-05 41.6 6.2 54 900-953 31-88 (95)
400 1hg3_A Triosephosphate isomera 90.2 4.3 0.00015 41.6 14.3 138 82-247 81-220 (225)
401 3usb_A Inosine-5'-monophosphat 90.2 1.1 3.7E-05 52.2 11.0 71 152-235 257-328 (511)
402 1vli_A Spore coat polysacchari 90.2 3.4 0.00012 45.7 14.3 131 66-225 31-179 (385)
403 2rfg_A Dihydrodipicolinate syn 90.2 1.1 3.8E-05 48.2 10.3 127 73-224 18-152 (297)
404 1jcn_A Inosine monophosphate d 90.1 0.5 1.7E-05 55.1 8.2 69 152-233 256-325 (514)
405 3p6l_A Sugar phosphate isomera 90.1 3.7 0.00013 42.6 14.3 138 63-225 9-154 (262)
406 3b8i_A PA4872 oxaloacetate dec 90.0 2.6 8.8E-05 44.9 12.8 159 81-249 33-203 (287)
407 2jbm_A Nicotinate-nucleotide p 90.0 0.61 2.1E-05 50.2 8.0 69 157-241 211-281 (299)
408 3eb2_A Putative dihydrodipicol 89.9 0.97 3.3E-05 48.7 9.7 126 73-223 22-155 (300)
409 1s2w_A Phosphoenolpyruvate pho 89.9 1.5 5.2E-05 46.9 11.0 178 60-250 15-207 (295)
410 1gox_A (S)-2-hydroxy-acid oxid 89.9 2 6.9E-05 47.7 12.5 102 125-232 115-253 (370)
411 1on2_A Transcriptional regulat 89.9 1.3 4.5E-05 41.6 9.5 65 887-951 10-75 (142)
412 1eix_A Orotidine 5'-monophosph 89.9 3.9 0.00013 42.5 14.0 140 63-242 65-231 (245)
413 1aj0_A DHPS, dihydropteroate s 89.7 0.69 2.4E-05 49.3 8.1 77 74-168 36-115 (282)
414 3tr2_A Orotidine 5'-phosphate 89.7 4.8 0.00016 41.7 14.3 144 62-243 58-227 (239)
415 1zco_A 2-dehydro-3-deoxyphosph 89.7 2.4 8.1E-05 44.7 12.1 139 75-234 73-229 (262)
416 1vqt_A Orotidine 5'-phosphate 89.6 1 3.5E-05 46.0 9.0 136 63-246 58-206 (213)
417 3fok_A Uncharacterized protein 89.6 2.3 7.7E-05 45.3 11.8 121 84-237 136-278 (307)
418 3lmz_A Putative sugar isomeras 89.6 3.3 0.00011 43.0 13.3 131 63-225 17-153 (257)
419 3daq_A DHDPS, dihydrodipicolin 89.5 1.4 4.7E-05 47.3 10.5 126 74-224 21-154 (292)
420 2yyu_A Orotidine 5'-phosphate 89.5 2.1 7.2E-05 44.6 11.6 143 63-242 55-225 (246)
421 2ojp_A DHDPS, dihydrodipicolin 89.4 1.7 5.8E-05 46.6 11.1 127 73-224 19-153 (292)
422 1x1o_A Nicotinate-nucleotide p 89.4 1.5 5E-05 46.8 10.3 106 105-240 162-276 (286)
423 1vs1_A 3-deoxy-7-phosphoheptul 89.4 2.8 9.7E-05 44.4 12.5 138 75-234 88-244 (276)
424 1dbt_A Orotidine 5'-phosphate 89.3 2.3 8E-05 44.0 11.7 142 63-242 54-224 (239)
425 3ffs_A Inosine-5-monophosphate 89.2 1 3.5E-05 50.4 9.3 67 153-233 146-213 (400)
426 1wa3_A 2-keto-3-deoxy-6-phosph 89.2 0.88 3E-05 45.9 8.2 81 133-234 10-91 (205)
427 1q7z_A 5-methyltetrahydrofolat 89.1 1.3 4.3E-05 52.2 10.5 119 33-167 137-269 (566)
428 1o4u_A Type II quinolic acid p 89.1 0.95 3.3E-05 48.2 8.5 110 105-241 159-277 (285)
429 4dbe_A Orotidine 5'-phosphate 89.0 2 6.9E-05 44.0 10.7 142 63-243 52-198 (222)
430 3bw2_A 2-nitropropane dioxygen 89.0 2.7 9.1E-05 46.6 12.7 100 115-234 45-175 (369)
431 2r91_A 2-keto-3-deoxy-(6-phosp 88.9 2.7 9.3E-05 44.8 12.2 124 73-221 16-145 (286)
432 2wqp_A Polysialic acid capsule 88.9 4.9 0.00017 43.9 14.3 187 12-227 20-231 (349)
433 4hb7_A Dihydropteroate synthas 88.9 1.8 6.1E-05 45.5 10.3 80 74-172 28-111 (270)
434 3a5f_A Dihydrodipicolinate syn 88.8 1.5 5.3E-05 46.9 10.2 124 73-224 19-153 (291)
435 3gk0_A PNP synthase, pyridoxin 88.7 0.62 2.1E-05 48.3 6.5 154 64-239 32-250 (278)
436 1jub_A Dihydroorotate dehydrog 88.7 5 0.00017 43.2 14.3 139 82-231 29-191 (311)
437 1vhc_A Putative KHG/KDPG aldol 88.6 3.9 0.00013 41.9 12.7 116 123-267 10-126 (224)
438 1vr6_A Phospho-2-dehydro-3-deo 88.6 2.5 8.4E-05 46.3 11.7 119 80-231 181-309 (350)
439 2p8t_A Hypothetical protein PH 88.6 0.89 3E-05 45.6 7.4 56 897-952 28-83 (200)
440 3tfx_A Orotidine 5'-phosphate 88.6 6.8 0.00023 41.0 14.6 143 63-242 56-226 (259)
441 2nuw_A 2-keto-3-deoxygluconate 88.5 3.2 0.00011 44.4 12.3 125 73-222 17-147 (288)
442 1vkf_A Glycerol uptake operon 88.4 0.57 2E-05 46.4 5.8 66 153-239 118-184 (188)
443 3lye_A Oxaloacetate acetyl hyd 88.4 3.1 0.00011 44.7 12.1 150 81-249 37-213 (307)
444 3fkr_A L-2-keto-3-deoxyarabona 88.4 4.6 0.00016 43.5 13.7 131 73-225 26-163 (309)
445 1vrd_A Inosine-5'-monophosphat 88.4 0.63 2.1E-05 54.0 7.3 70 152-234 238-308 (494)
446 1gvf_A Tagatose-bisphosphate a 88.3 4.1 0.00014 43.3 12.8 119 107-233 104-233 (286)
447 3s5o_A 4-hydroxy-2-oxoglutarat 88.3 2.2 7.6E-05 46.0 11.1 129 73-224 32-168 (307)
448 3jr2_A Hexulose-6-phosphate sy 88.2 4.1 0.00014 41.4 12.6 126 65-232 8-139 (218)
449 1o60_A 2-dehydro-3-deoxyphosph 88.2 1.9 6.3E-05 46.2 10.1 110 109-234 114-241 (292)
450 3bro_A Transcriptional regulat 88.2 1.3 4.5E-05 41.2 8.1 54 899-952 50-110 (141)
451 3g3z_A NMB1585, transcriptiona 88.0 1.3 4.5E-05 41.5 8.1 61 892-952 38-105 (145)
452 3dz1_A Dihydrodipicolinate syn 88.0 5.5 0.00019 43.0 14.0 128 73-225 26-161 (313)
453 3c2e_A Nicotinate-nucleotide p 88.0 0.64 2.2E-05 49.9 6.4 68 158-241 214-286 (294)
454 1twd_A Copper homeostasis prot 88.0 5.6 0.00019 41.3 13.2 125 81-230 13-146 (256)
455 1w0m_A TIM, triosephosphate is 87.9 5.9 0.0002 40.6 13.3 138 82-247 78-217 (226)
456 1yxy_A Putative N-acetylmannos 87.9 2 6.8E-05 44.2 10.0 97 122-229 59-157 (234)
457 3ech_A MEXR, multidrug resista 87.9 0.78 2.7E-05 43.0 6.4 61 892-952 44-111 (142)
458 2h09_A Transcriptional regulat 87.8 2.1 7E-05 40.9 9.5 66 886-951 41-107 (155)
459 1jgs_A Multiple antibiotic res 87.8 1.1 3.7E-05 41.6 7.2 60 894-953 43-109 (138)
460 1kko_A 3-methylaspartate ammon 87.7 0.53 1.8E-05 53.3 5.9 96 120-231 218-330 (413)
461 3qfe_A Putative dihydrodipicol 87.7 2.1 7.1E-05 46.5 10.4 124 74-224 30-166 (318)
462 3nrv_A Putative transcriptiona 87.7 0.98 3.3E-05 42.5 7.0 62 891-952 46-114 (148)
463 1tx2_A DHPS, dihydropteroate s 87.6 1 3.5E-05 48.2 7.7 79 75-168 62-140 (297)
464 1bja_A Transcription regulator 87.6 1.6 5.4E-05 38.3 7.4 60 893-952 24-84 (95)
465 1kcz_A Beta-methylaspartase; b 87.5 0.38 1.3E-05 54.5 4.6 150 62-238 165-337 (413)
466 3oop_A LIN2960 protein; protei 87.5 1.2 4.2E-05 41.6 7.5 59 894-952 46-111 (143)
467 2egz_A 3-dehydroquinate dehydr 87.5 5.1 0.00017 40.9 12.7 90 66-172 3-92 (219)
468 3e6m_A MARR family transcripti 87.4 1.1 3.6E-05 43.2 7.2 59 894-952 62-127 (161)
469 3k0l_A Repressor protein; heli 87.4 1.2 4.1E-05 42.8 7.5 61 892-952 53-120 (162)
470 3ajx_A 3-hexulose-6-phosphate 87.4 4 0.00014 40.9 11.8 128 65-232 2-134 (207)
471 2hr3_A Probable transcriptiona 87.3 1.6 5.5E-05 40.9 8.2 60 893-952 43-110 (147)
472 2qkf_A 3-deoxy-D-manno-octulos 87.3 2.7 9.3E-05 44.6 10.7 110 109-234 111-238 (280)
473 2pg4_A Uncharacterized protein 87.2 1.2 4E-05 38.9 6.7 60 894-953 24-90 (95)
474 3h5d_A DHDPS, dihydrodipicolin 87.1 2.3 8E-05 45.9 10.4 127 73-224 25-160 (311)
475 3s2w_A Transcriptional regulat 87.0 1.2 4.1E-05 42.6 7.3 59 894-952 59-124 (159)
476 1eye_A DHPS 1, dihydropteroate 86.9 2.2 7.4E-05 45.4 9.6 80 73-168 26-105 (280)
477 3ldv_A Orotidine 5'-phosphate 86.8 5 0.00017 41.9 12.3 146 63-245 78-247 (255)
478 1qpo_A Quinolinate acid phosph 86.8 1.9 6.6E-05 45.8 9.2 105 110-241 166-278 (284)
479 1eep_A Inosine 5'-monophosphat 86.8 0.95 3.3E-05 51.0 7.3 67 153-232 155-222 (404)
480 1q7z_A 5-methyltetrahydrofolat 86.8 2.4 8.1E-05 49.8 10.8 98 74-211 338-438 (566)
481 4hbl_A Transcriptional regulat 86.7 1.1 3.7E-05 42.4 6.7 61 893-953 49-116 (149)
482 3bj6_A Transcriptional regulat 86.7 1.5 5.3E-05 41.3 7.8 59 894-952 49-114 (152)
483 2z6i_A Trans-2-enoyl-ACP reduc 86.6 2.5 8.5E-05 46.2 10.4 91 116-233 47-139 (332)
484 1zco_A 2-dehydro-3-deoxyphosph 86.6 8.5 0.00029 40.4 14.0 128 73-235 34-168 (262)
485 1y0e_A Putative N-acetylmannos 86.6 2.6 8.9E-05 42.9 10.0 69 150-239 23-102 (223)
486 2nli_A Lactate oxidase; flavoe 86.5 5.1 0.00017 44.3 12.9 94 132-231 132-256 (368)
487 2fbh_A Transcriptional regulat 86.4 1.9 6.6E-05 40.2 8.2 56 896-951 49-111 (146)
488 1w3i_A EDA, 2-keto-3-deoxy glu 86.4 3.9 0.00013 43.7 11.6 124 73-221 17-146 (293)
489 4adt_A Pyridoxine biosynthetic 86.3 1.2 4.3E-05 47.6 7.4 86 153-247 31-121 (297)
490 4g8t_A Glucarate dehydratase; 86.2 3.7 0.00013 47.0 12.0 123 74-229 202-328 (464)
491 4ef8_A Dihydroorotate dehydrog 86.2 3.9 0.00013 44.9 11.6 141 80-231 62-227 (354)
492 2vp8_A Dihydropteroate synthas 86.2 1.1 3.7E-05 48.5 6.9 79 74-168 63-142 (318)
493 3sgz_A Hydroxyacid oxidase 2; 86.1 4.3 0.00015 44.5 11.8 93 133-231 122-244 (352)
494 2hzt_A Putative HTH-type trans 86.1 1.9 6.4E-05 38.6 7.5 53 897-949 25-85 (107)
495 3eco_A MEPR; mutlidrug efflux 86.1 1.5 5.2E-05 40.7 7.3 55 898-952 46-107 (139)
496 3cdh_A Transcriptional regulat 86.1 1.8 6.3E-05 41.0 8.0 61 892-952 50-117 (155)
497 3noy_A 4-hydroxy-3-methylbut-2 86.1 6.1 0.00021 42.9 12.5 84 62-173 28-115 (366)
498 2v82_A 2-dehydro-3-deoxy-6-pho 86.1 2.1 7.3E-05 43.2 8.9 81 132-233 6-88 (212)
499 2okt_A OSB synthetase, O-succi 86.0 2.6 9E-05 46.2 10.2 120 65-231 121-243 (342)
500 3fa4_A 2,3-dimethylmalate lyas 86.0 7.8 0.00027 41.4 13.4 150 81-249 30-205 (302)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=2.8e-50 Score=451.75 Aligned_cols=297 Identities=38% Similarity=0.637 Sum_probs=257.4
Q ss_pred CCCceEEccCcCcCCHHHHHHHHHcCCCcEEEeccccccccc-CCchhccccCCCCCCEEEEecCCCHHHHHHHHHHHHH
Q psy2378 9 NKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-GNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQK 87 (956)
Q Consensus 9 ~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~-~~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~ 87 (956)
++||+++|||+|+||.+||++++++|++|++||||++++.++ +...++..+++.+.|+++||+|++|+.|+++|+++++
T Consensus 2 l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a~~ 81 (350)
T 3b0p_A 2 LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEA 81 (350)
T ss_dssp CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 489999999999999999999999998899999999999887 5555667788999999999999999999999999999
Q ss_pred cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEE
Q psy2378 88 WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTF 167 (956)
Q Consensus 88 ~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i 167 (956)
+|||+||||+|||.+|+++++||++|++|++++.+|++++++++++||++|+|+||++..+.+++.++++.++++|+|+|
T Consensus 82 ~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I 161 (350)
T 3b0p_A 82 FGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVF 161 (350)
T ss_dssp TTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999987766678999999999999999
Q ss_pred EEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccCCcchHHHHH
Q psy2378 168 IVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 168 ~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+||+|+.+ +|++|..+++.++.+|++++++++.++++|||+||||.|+++++++++.||+||+||+++.|||+|+++++
T Consensus 162 ~V~~r~~~-~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~GaD~V~iGRa~l~~P~l~~~i~~ 240 (350)
T 3b0p_A 162 VVHARSAL-LALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADR 240 (350)
T ss_dssp EEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHTTSSEEEECHHHHHCGGGGTTHHH
T ss_pred EEecCchh-cccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHhCCCEEEECHHHHhCcHHHHHHHH
Confidence 99999863 36666655566778999999999998789999999999999999999779999999999999999999999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHhhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCccccc
Q psy2378 248 NYYSNLPQYKIPTRIDIINLDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTK 320 (956)
Q Consensus 248 ~~~~~~~~~~~~~~~e~~~~~~~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~ 320 (956)
.+++ .. +.+++.|+++.+++|.+..... .+ ....+++|+.||++|+ +.+.+++..++..
T Consensus 241 ~l~~-~~--~~~~~~~~~~~~~~~~~~~~~~---g~-~~~~~~kh~~~~~~g~-------~~~~~~r~~l~~~ 299 (350)
T 3b0p_A 241 RVFG-LP--RRPSRLEVARRMRAYLEEEVLK---GT-PPWAVLRHMLNLFRGR-------PKGRLWRRLLSEG 299 (350)
T ss_dssp HTTC-CS--CCCCHHHHHHHHHHHHHHHHHH---TC-CHHHHHTTSTTTTTTS-------TTHHHHHHHHHHH
T ss_pred HhcC-CC--CCCCHHHHHHHHHHHHHHHHHc---Cc-cHHHHHHHHHHHHccC-------CCHHHHHHHHHCC
Confidence 8876 33 6789999999999998865441 11 2345777888888887 5666777666654
No 2
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=100.00 E-value=3.5e-49 Score=460.48 Aligned_cols=334 Identities=20% Similarity=0.330 Sum_probs=296.2
Q ss_pred CCCCCcceeeeeeecccccC--CcchHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHHHHHHHHccc
Q psy2378 622 YKIPYKVIINEAIELVKSFG--NIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLF 699 (956)
Q Consensus 622 ~~~P~c~~~Ce~C~l~k~~~--~~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll~~i~~~~~~ 699 (956)
.++|+|+..|.||...+... .....+|++.+++|++...+.+....+.+++|+||||+.++.+++.++++.+.+.+++
T Consensus 57 ihIpfC~~~C~yC~~~~~~~~~~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~ 136 (457)
T 1olt_A 57 VHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQF 136 (457)
T ss_dssp EEECEESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSCHHHHHHHHHHHHHHSCE
T ss_pred EEcCCCCCCCCCCCCceeccCCcchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCcccCCHHHHHHHHHHHHHhCCC
Confidence 67999999999999876543 2335688999999998776654444688999999999999999999999999998776
Q ss_pred CCCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCe-eEEEEeecCCC
Q psy2378 700 KKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNN-FNLDLIYALPN 778 (956)
Q Consensus 700 ~~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~~~~~-i~~dlI~GlPg 778 (956)
....++++++||+.++++.++.|+++|++|||+|+||+|+++|+.|+|+|+.+++.++++.+++.|+. +++|+|+|+||
T Consensus 137 ~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPg 216 (457)
T 1olt_A 137 NADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPK 216 (457)
T ss_dssp EEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTT
T ss_pred CCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCC
Confidence 66689999999999999999999999999999999999999999999999999999999999999775 99999999999
Q ss_pred CCHHHHHHHHHHHHccCCCeEEEEeeeccCCcccccC--CCCCCCCHHHHHHHHHHHHHHHHhcCchhHHHHhhcCCCCc
Q psy2378 779 QTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKY--PPLSMPSNDENAVMQDKITSLLKNNYYKNYEISAYSKTGYE 856 (956)
Q Consensus 779 qT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~g~~~yeis~far~g~~ 856 (956)
||.++|.+|++++.+++|+|+++|+|++.|||+.++. .+..+|+.++..+++..+.+.|.+.||.+|+++||++|+++
T Consensus 217 et~e~~~~tl~~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~yeis~fa~~~~~ 296 (457)
T 1olt_A 217 QTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDE 296 (457)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEETTEEECTTSH
T ss_pred CCHHHHHHHHHHHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEechhcCCCch
Confidence 9999999999999999999999999999999998763 34567889999999999999999999999999999999987
Q ss_pred ---c-------cchhcccc--CCceeeccccchhh-------------------------------hchhhHHHHHHHHh
Q psy2378 857 ---S-------QHNLNYWK--FGDYLGNSIAKSKK-------------------------------IEKKCLIFEFMLNA 893 (956)
Q Consensus 857 ---s-------~hn~~yw~--~~~ylg~g~~~~~~-------------------------------~~~~~~~~e~~~~~ 893 (956)
| +||..||. ..+|+|+|+++.+. ++..+.+.|.++++
T Consensus 297 ~~~~~~~~~~~r~~~~Y~~~~~~~~lG~G~gA~s~~~~~~~~n~~~~~~Y~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~ 376 (457)
T 1olt_A 297 LAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKS 376 (457)
T ss_dssp HHHHHHHTCCEECSSCEESCCSCEEEEESTTCEEEETTEEEEECSSHHHHHHHHHHHSCCEEEEEECCHHHHHHHHHHHH
T ss_pred hhhHHhhcchhhcccccccCCCCeEEEEccceeecCCCCEEEecCCHHHHHHHHhcCCCceeeeeeCCHHHHHHHHHHHH
Confidence 3 45578885 68999999986422 22456778999999
Q ss_pred hhhccCCChhhHHHHhCCCHHH-HH---HHHHHHHHCCCeEEcCCEEeeCchhhchHHHHHHHhhc
Q psy2378 894 LRLKDGFSPNLFFERTGINIKI-IE---SKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDLQQIFLN 955 (956)
Q Consensus 894 lr~~~gi~~~~~~~~~g~~~~~-~~---~~l~~l~~~Gl~~~~~~~~~lT~~G~~~~~~i~~~f~~ 955 (956)
||+..|++++.|.++||.++.. +. ..|+.|+++||++.++++|+||++|++|+|+|+..|..
T Consensus 377 Lr~~~g~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~gll~~~~~~~~lT~~G~~~~~~i~~~f~~ 442 (457)
T 1olt_A 377 LICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDT 442 (457)
T ss_dssp HHHHSEEEHHHHHHHTTCCHHHHTHHHHHHHHHHHHTTSEEECSSEEEECTTTGGGHHHHHHTTCS
T ss_pred HHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEECHhhHHHHHHHHHHHHH
Confidence 9999999999999999999752 32 45788999999999999999999999999999999853
No 3
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=100.00 E-value=3.2e-51 Score=408.09 Aligned_cols=165 Identities=41% Similarity=0.743 Sum_probs=153.2
Q ss_pred hhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCccccccCCCCCCCcceEEEeccCCCcccCChhhh
Q psy2378 270 ENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDR 349 (956)
Q Consensus 270 ~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~~n~~~~~~~~~~~~~~~~~~~tgis~~dr 349 (956)
++||||+|+++++++.|++.++||.+|++|++|++++++.+++|+|++|+..|+++++|+||||||++.|++|||||+||
T Consensus 27 edREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~~~~L~Lp~mv~~n~~~~~taFtVsVda~~g~tTGISA~DR 106 (204)
T 1tks_A 27 EDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLANRSDRHGTAYTITCDFAEGTTTGISAHDR 106 (204)
T ss_dssp SCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC------CCCBBCCEEESTTCSSSCSHHHH
T ss_pred CCCCCCEEEEEEhhhCCHHHHHHHHHhCCCcEEEEcCHHHHhhCCCchhccccCCCCCCCeEEEEeccCCCCCCcCHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCCCccCCCccceeeeccCcccccCChhhHHHHHHHHcCCCcchhhhhcc-cccccccc-------cc
Q psy2378 350 AHTIKVASSKKAKPSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEIL-NDDGTMAR-------AQ 421 (956)
Q Consensus 350 a~t~~~~~~~~~~~~~~~~pghv~pl~~~~~g~~~r~g~tea~~~l~~~ag~~~~~vi~e~~-~~~g~~~~-------~~ 421 (956)
|.|||++++++++|+||++|||||||+|++|||++|+||||||||||||||++|++||||++ ++||+|++ ++
T Consensus 107 a~Ti~~l~~~~~~p~df~rPGHvfPL~A~~gGvl~R~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~ 186 (204)
T 1tks_A 107 ALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGK 186 (204)
T ss_dssp HHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHcCCCCCcceeeecCCCCccCCCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 88999997 46
Q ss_pred cCceEEEEcCCcc
Q psy2378 422 EKNILHISVPGAL 434 (956)
Q Consensus 422 e~~i~~~~vpg~~ 434 (956)
+|++++++|...+
T Consensus 187 ~h~l~iiti~dLi 199 (204)
T 1tks_A 187 KHGIKIININQLV 199 (204)
T ss_dssp HHTCCEEEHHHHH
T ss_pred HcCCcEEEHHHHH
Confidence 7899999986543
No 4
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=100.00 E-value=1.6e-50 Score=408.56 Aligned_cols=171 Identities=40% Similarity=0.628 Sum_probs=163.4
Q ss_pred hhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCccccccCCCCCCCcceEEEeccC-CCcccCChhh
Q psy2378 270 ENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAAN-GVTTGISASD 348 (956)
Q Consensus 270 ~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~~n~~~~~~~~~~~~~~~~-~~~tgis~~d 348 (956)
++||||+|+++++++.|++.++||.+|++|++|++++++.+++|+|++|+..|+++++|+||||||++. |++|||||+|
T Consensus 34 edREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~n~~~~~TaFTVsVda~~~g~tTGISA~D 113 (233)
T 1k4i_A 34 PSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHD 113 (233)
T ss_dssp TTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSSCCCSSCCCBBCCEEECSTTCSSSCSHHH
T ss_pred CCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccccCCCCCCCeEEEEEcccCCCCCCcCHHH
Confidence 569999999999999999999999999999999999999999999999999999999999999999987 9999999999
Q ss_pred hhHHHHHhhcCCCCCCCccCCCccceeeeccCcccccCChhhHHHHHHHHcCCCcchhhhhcccc-----------cccc
Q psy2378 349 RAHTIKVASSKKAKPSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILND-----------DGTM 417 (956)
Q Consensus 349 ra~t~~~~~~~~~~~~~~~~pghv~pl~~~~~g~~~r~g~tea~~~l~~~ag~~~~~vi~e~~~~-----------~g~~ 417 (956)
||.|||+|++++++|+||+||||||||+|++|||++|+||||||||||||||++|++||||++++ ||+|
T Consensus 114 Ra~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl~PagVicEi~~~~~~~~~~~~~~dG~m 193 (233)
T 1k4i_A 114 RALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGM 193 (233)
T ss_dssp HHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTCCSBEEEEEBEECCEECTTSSCEESCEE
T ss_pred HHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCCCceEEEEEeCCCcccccccccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred cc-------cccCceEEEEcCCcccHHHHH
Q psy2378 418 AR-------AQEKNILHISVPGALEIPLAL 440 (956)
Q Consensus 418 ~~-------~~e~~i~~~~vpg~~e~p~~~ 440 (956)
++ +++|++++++|...++....-
T Consensus 194 ar~~~l~~fA~~h~L~iitI~dLi~yr~~~ 223 (233)
T 1k4i_A 194 LRGDECVAFARRWGLKVCTIEDMIAHVEKT 223 (233)
T ss_dssp CCHHHHHHHHHHTTCEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEHHHHHHHHHhc
Confidence 97 478999999998876665433
No 5
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=100.00 E-value=2.7e-50 Score=402.78 Aligned_cols=167 Identities=44% Similarity=0.784 Sum_probs=149.6
Q ss_pred hhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCccccccCCCCCCCcceEEEeccCCCcccCChhhh
Q psy2378 270 ENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDR 349 (956)
Q Consensus 270 ~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~~n~~~~~~~~~~~~~~~~~~~tgis~~dr 349 (956)
++||||+|+++++++.|++.++||.+|++|++|++++++.+++|+|++|+..|+++++|+||||||++.|++|||||+||
T Consensus 26 edREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~a~~L~Lp~mv~~n~~~~~taftvsvda~~g~tTGISA~DR 105 (206)
T 3mio_A 26 EDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAVNQDKHGTAYTVTVDARNGIGTGISASDR 105 (206)
T ss_dssp SCTTCCCEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCSCCC-----------CCCEEESSSCSSSCSHHHH
T ss_pred CCCccceeEEEEhHhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCCcccccCCCCCCCCeEEEEecCCCCCCCcCHHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCCCccCCCccceeeeccCcccccCChhhHHHHHHHHcCCCcchhhhhc--ccccccccc-------c
Q psy2378 350 AHTIKVASSKKAKPSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEI--LNDDGTMAR-------A 420 (956)
Q Consensus 350 a~t~~~~~~~~~~~~~~~~pghv~pl~~~~~g~~~r~g~tea~~~l~~~ag~~~~~vi~e~--~~~~g~~~~-------~ 420 (956)
|.|||+|++|+++|+||++|||||||+|++|||++|+||||||||||||||+.|++||||+ +|+||+|++ +
T Consensus 106 a~Ti~~ladp~~~p~Df~rPGHvfPL~A~~gGvl~R~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA 185 (206)
T 3mio_A 106 ATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFA 185 (206)
T ss_dssp HHHHHHHHCTTCCGGGEEEEEEEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHhCCCCCceeEeeCCCCcccCCChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999997 4
Q ss_pred ccCceEEEEcCCcccH
Q psy2378 421 QEKNILHISVPGALEI 436 (956)
Q Consensus 421 ~e~~i~~~~vpg~~e~ 436 (956)
++|+++++++..-++.
T Consensus 186 ~~h~l~~iti~dli~y 201 (206)
T 3mio_A 186 DEHGLALITIADLIEW 201 (206)
T ss_dssp HHHTCEEEEHHHHHHH
T ss_pred HHcCCcEEEHHHHHHH
Confidence 6789999998665443
No 6
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=100.00 E-value=2e-50 Score=408.87 Aligned_cols=166 Identities=34% Similarity=0.538 Sum_probs=156.2
Q ss_pred hhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCccccccCCC----------------C--CCCcce
Q psy2378 270 ENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNS----------------S--FGTNFT 331 (956)
Q Consensus 270 ~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~~n~~----------------~--~~~~~~ 331 (956)
++||||+|+++++++.|++.++||.+|++|++|++++++.+++|+||+|+..|++ + ++|+||
T Consensus 23 edREnEgDli~aAe~~Tpe~i~fm~~~~~GliC~~l~~e~~~~L~Lp~Mv~~n~~~~~~~~~~~~l~~~~~~Y~~~TaFt 102 (227)
T 1snn_A 23 DEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQKFKVLRELYPNDIPYDEKSSFS 102 (227)
T ss_dssp TTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTTTCHHHHHTCCTTCTTSSSCCEE
T ss_pred CCCCCceeEEEEhhhCCHHHHHHHHHcCCCcEEEEcCHHHHhhCCChhhhhhhccccccccccccccccccccCCCCCcE
Confidence 5699999999999999999999999999999999999999999999999987653 4 889999
Q ss_pred EEEeccCCCcccCChhhhhHHHHHhhc------CCCCCCCccCCCccceeeeccCcccccCChhhHHHHHHHHcCCCcch
Q psy2378 332 VSIEAANGVTTGISASDRAHTIKVASS------KKAKPSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSA 405 (956)
Q Consensus 332 ~~~~~~~~~~tgis~~dra~t~~~~~~------~~~~~~~~~~pghv~pl~~~~~g~~~r~g~tea~~~l~~~ag~~~~~ 405 (956)
||||++. ++|||||+|||.|||+|++ ++++|+||++|||||||+|++|||++|+||||||||||||||++|++
T Consensus 103 vsVd~~~-~tTGISA~DRa~Tir~la~~~~~~~~~~~~~df~rPGHVfPL~A~~gGVl~R~GHTEaaVdLarlAGl~Pa~ 181 (227)
T 1snn_A 103 ITINHRK-TFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKNRQGHTEMTVALAELANLVPIT 181 (227)
T ss_dssp EEEEETT-CSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSEE
T ss_pred EEEEcCC-CCCCCCHHHHHHHHHHHHhhhcccCCCCCHHHcCCCCCceeEEeCCCCEeeCCCchHHHHHHHHHcCCCceE
Confidence 9999984 9999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccccccc-------cccCceEEEEcCCcccH
Q psy2378 406 VICEILNDDGTMAR-------AQEKNILHISVPGALEI 436 (956)
Q Consensus 406 vi~e~~~~~g~~~~-------~~e~~i~~~~vpg~~e~ 436 (956)
|||||||+||+|++ +++|+++++++...++.
T Consensus 182 VicEi~~ddG~mar~~~l~~fA~~h~l~~iti~dLi~y 219 (227)
T 1snn_A 182 TICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINY 219 (227)
T ss_dssp EEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHH
T ss_pred EEEEEeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHH
Confidence 99999999999996 46789999998765443
No 7
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=100.00 E-value=1.2e-47 Score=388.14 Aligned_cols=168 Identities=49% Similarity=0.839 Sum_probs=159.6
Q ss_pred hhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCccccccCCCCCCCcceEEEeccCCCcccCChhhh
Q psy2378 270 ENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDR 349 (956)
Q Consensus 270 ~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~~n~~~~~~~~~~~~~~~~~~~tgis~~dr 349 (956)
+.||||+|+++++++.|++.++||.+|.+|++|++++++++++|+|++|+..|+++++|+||||||++.|++|||||.||
T Consensus 35 edREnEgdli~aAe~~T~e~i~fm~~~~~GliCl~lt~~ra~~L~Lp~mv~~n~~~~~taftVsvda~~g~tTGISa~DR 114 (217)
T 1g57_A 35 EDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADR 114 (217)
T ss_dssp ---CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSSCCCTTCCCBBSCEEESSSCSSSCSHHHH
T ss_pred CCCCcCEEEEEEhhhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCccccccCCCcCCCceEEeeccccCCCCCcCHHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCCCccCCCccceeeeccCcccccCChhhHHHHHHHHcCCCcchhhhhcccccccccc-------ccc
Q psy2378 350 AHTIKVASSKKAKPSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMAR-------AQE 422 (956)
Q Consensus 350 a~t~~~~~~~~~~~~~~~~pghv~pl~~~~~g~~~r~g~tea~~~l~~~ag~~~~~vi~e~~~~~g~~~~-------~~e 422 (956)
+.||+++++|+++|+||++|||||||+|++|||++|+||||||||||||||+.|++||||++++||+|++ +++
T Consensus 115 a~Ti~~lad~~~~~~Df~~PGHvfPL~A~~gGvl~R~GhTEAavdLarLAGl~Pa~vicEi~~~dG~mar~~~l~~fA~~ 194 (217)
T 1g57_A 115 ITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANK 194 (217)
T ss_dssp HHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSCEEEEEBBCTTSSBCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHcCCCCCccceeecCCCcccCCCcHHHHHHHHHHcCCCceEEEEEEeCCCCCccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995 578
Q ss_pred CceEEEEcCCcccHH
Q psy2378 423 KNILHISVPGALEIP 437 (956)
Q Consensus 423 ~~i~~~~vpg~~e~p 437 (956)
|++++++|....+..
T Consensus 195 h~l~~iti~dLi~yr 209 (217)
T 1g57_A 195 HNMALVTIEDLVAYR 209 (217)
T ss_dssp TTCEEEEHHHHHHHH
T ss_pred cCCCEEEHHHHHHHH
Confidence 999999988766553
No 8
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=3.9e-45 Score=406.24 Aligned_cols=284 Identities=21% Similarity=0.335 Sum_probs=239.8
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEeccccccccc-CC--chhccccCCCCCCEEEEecCCCHHHHHHHHHHHH
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-GN--KKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQ 86 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~-~~--~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~ 86 (956)
+||+++|||+++||.+||.+++++| +|++||||++++.+. +. ..+.+ .++.+.|+++||+|++|++|+++|++++
T Consensus 4 ~nri~~APM~~~t~~~~r~~~~~~G-~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~a~ 81 (318)
T 1vhn_A 4 EVKVGLAPMAGYTDSAFRTLAFEWG-ADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILS 81 (318)
T ss_dssp -CEEEECCCTTTCSHHHHHHHHTTT-CCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHHHT
T ss_pred CCCEEECCCCCCCcHHHHHHHHHHC-cCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 8999999999999999999999998 599999999988876 32 22344 7889999999999999999999999999
Q ss_pred HcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCE
Q psy2378 87 KWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRT 166 (956)
Q Consensus 87 ~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~ 166 (956)
++ ||+||||+|||.+|+++++||++|++||+++.++++++++++++||+||+|.||+..+ ..++++.++++|+|+
T Consensus 82 ~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~----~~~~a~~l~~~G~d~ 156 (318)
T 1vhn_A 82 EK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE----VEEIYRILVEEGVDE 156 (318)
T ss_dssp TT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCC----HHHHHHHHHHTTCCE
T ss_pred Hh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHH----HHHHHHHHHHhCCCE
Confidence 99 9999999999999999999999999999999999999999999999999999998765 348999999999999
Q ss_pred EEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHH
Q psy2378 167 FIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 167 i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~ 244 (956)
|+||+|+. . +.+.++++|+.+.++++ ++|||+||||.|++|+.++++. ||+||+||+++.|||+|.+
T Consensus 157 i~v~g~~~-~-------~~~~~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~ 225 (318)
T 1vhn_A 157 VFIHTRTV-V-------QSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQ 225 (318)
T ss_dssp EEEESSCT-T-------TTTSSCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHH
T ss_pred EEEcCCCc-c-------ccCCCCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHH
Confidence 99999984 2 22344578988888877 6999999999999999999994 9999999999999999999
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHHHhhhhcccccccccCCCCHHHHHHHHHhhcccccccCCHHHHHHccCcccccc
Q psy2378 245 FDLNYYSNLPQYKIPTRIDIINLDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKK 321 (956)
Q Consensus 245 i~~~~~~~~~~~~~~~~~e~~~~~~~~~e~egdlv~~a~~~t~~~v~fm~~y~~Glic~~l~~~~~~~L~l~~m~~~ 321 (956)
+++.+.++.. +.+++.++++.+.+|.+....+.. .......+.+|+.+|.+|+ +.+.+++..++...
T Consensus 226 ~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~-------~~~~~~r~~~~~~~ 292 (318)
T 1vhn_A 226 IKDFLRSGKY--SEPSREEILRTFERHLELLIKTKG-ERKAVVEMRKFLAGYTKDL-------KGARRFREKVMKIE 292 (318)
T ss_dssp HHHHHHHSCC--CCCCHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHTTHHHHTTTC-------TTHHHHHHHHTTCC
T ss_pred HHHHHhCCCC--CCCCHHHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHhcC-------CChHHHHHHHHcCC
Confidence 9987763332 468899999999988875433211 0011234667888999987 56667776666543
No 9
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=3.2e-34 Score=320.73 Aligned_cols=241 Identities=14% Similarity=0.195 Sum_probs=195.8
Q ss_pred CccccccCCCceEEccCcCcC---------CHHHHHHH-HHcCCCcEEEecccccccc--c--C----Cch-------h-
Q psy2378 2 NMINSKYNKRKISIAPMMNLT---------DRHCRMFH-RQITRYSWLYTEMFTTQAI--L--G----NKK-------H- 55 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~t---------d~~fR~~~-~~~g~~~l~~tem~~~~~l--~--~----~~~-------~- 55 (956)
.|++.++ +||+++|||++++ +..++++. ++.||++|++||++++..- . + ... +
T Consensus 10 ~ig~~~l-~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~ 88 (338)
T 1z41_A 10 TIKDMTL-KNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKL 88 (338)
T ss_dssp EETTEEE-SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHH
T ss_pred eECCEEE-cCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHH
Confidence 4677787 9999999999764 44555543 3446789999999866532 1 1 011 1
Q ss_pred ccccCCCCCCEEEEecCC-----------------------CH------------HHHHHHHHHHHHcCCCEEEecCCC-
Q psy2378 56 CLDFNAEEHPIAFQVGDN-----------------------EP------------KKLAKSAKIIQKWGYDEINLNCGC- 99 (956)
Q Consensus 56 ~~~~~~~~~p~~vQl~g~-----------------------~~------------~~~~~aA~~~~~~G~d~IeiN~gC- 99 (956)
....|..+.++++||++. .| ++|++||++++++|||+||||++|
T Consensus 89 ~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~g 168 (338)
T 1z41_A 89 TEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHG 168 (338)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTT
T ss_pred HHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccc
Confidence 123578899999999863 33 789999999999999999999997
Q ss_pred --------CcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCC--CCCCcHHHHHHHHHHHHHcCCCEEEE
Q psy2378 100 --------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI--DDINSYDFVRDFVGTVSSAGCRTFIV 169 (956)
Q Consensus 100 --------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~--~~~~~~~~~~~~a~~l~~~G~~~i~v 169 (956)
|..|.|+|+||+++++|++++.||+++||++++.||+||++... ..+.+.++..++++.|+++|+|+|++
T Consensus 169 yLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v 248 (338)
T 1z41_A 169 YLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDC 248 (338)
T ss_dssp SHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999841 11234467899999999999999999
Q ss_pred cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 170 HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 170 h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
|+++...+. ....+..+|+.++++++.+ ++|||++|||.|+++++++++. ||+|++||++++||||++++++
T Consensus 249 ~~~~~~~~~-----~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 249 SSGALVHAD-----INVFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp ECCCSSCCC-----CCCCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred ecCccccCC-----CCCCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHc
Confidence 988631010 0011235789999999998 8999999999999999999987 9999999999999999999998
Q ss_pred hh
Q psy2378 248 NY 249 (956)
Q Consensus 248 ~~ 249 (956)
.+
T Consensus 323 ~~ 324 (338)
T 1z41_A 323 QL 324 (338)
T ss_dssp HT
T ss_pred CC
Confidence 65
No 10
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=2.1e-34 Score=324.95 Aligned_cols=233 Identities=13% Similarity=0.189 Sum_probs=195.2
Q ss_pred CccccccCCCceEEccCcCc-------CCHHHHHHHHHcCCCcEEEecccccccc--c--C----Cchh--------ccc
Q psy2378 2 NMINSKYNKRKISIAPMMNL-------TDRHCRMFHRQITRYSWLYTEMFTTQAI--L--G----NKKH--------CLD 58 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~-------td~~fR~~~~~~g~~~l~~tem~~~~~l--~--~----~~~~--------~~~ 58 (956)
.|++.++ +||+++|||++. |+.++|+++++.| ++|++||+++++.- . + .... ...
T Consensus 16 ~ig~~~l-~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~a 93 (377)
T 2r14_A 16 QLGSLSL-PNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEA 93 (377)
T ss_dssp EETTEEE-SCSEEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHHH
T ss_pred eECCEEe-cCCeEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHHH
Confidence 4667777 999999999986 9999999999887 79999999876532 1 1 0111 123
Q ss_pred cCCCCCCEEEEecCC-------------------------------------------CH------------HHHHHHHH
Q psy2378 59 FNAEEHPIAFQVGDN-------------------------------------------EP------------KKLAKSAK 83 (956)
Q Consensus 59 ~~~~~~p~~vQl~g~-------------------------------------------~~------------~~~~~aA~ 83 (956)
.|..+.++++||++. .| ++|++||+
T Consensus 94 vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~ 173 (377)
T 2r14_A 94 VHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQ 173 (377)
T ss_dssp HHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHH
T ss_pred HhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHH
Confidence 588899999999851 24 79999999
Q ss_pred HHHHcCCCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccCc-cEEEEeccCC-----CCCCc
Q psy2378 84 IIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIGI-----DDINS 148 (956)
Q Consensus 84 ~~~~~G~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g~-----~~~~~ 148 (956)
+++++|||+||||++| |..|.|+|+||+++++|++++.||+++||++++. ||.||++... .+..+
T Consensus 174 ~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~ 253 (377)
T 2r14_A 174 RAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEP 253 (377)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCH
T ss_pred HHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCC
Confidence 9999999999999997 9999999999999999999999999999999963 9999999852 12344
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--c
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--I 226 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--a 226 (956)
.++..++++.|+++|+|+|++|+|+. .+. +.. .+|++++++++.+ ++|||+||+| ++++++++++. |
T Consensus 254 ~~~~~~la~~le~~Gvd~i~v~~~~~-~~~-------~~~-~~~~~~~~ik~~~-~iPvi~~Ggi-~~~~a~~~l~~g~a 322 (377)
T 2r14_A 254 EAMAFYLAGELDRRGLAYLHFNEPDW-IGG-------DIT-YPEGFREQMRQRF-KGGLIYCGNY-DAGRAQARLDDNTA 322 (377)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC--------------C-CCTTHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcc-cCC-------CCc-chHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHHCCCc
Confidence 56789999999999999999999863 111 011 2678899999998 7999999999 69999999987 9
Q ss_pred CEEEEccccccCCcchHHHHH
Q psy2378 227 DGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 227 d~VmiGR~~l~~P~l~~~i~~ 247 (956)
|+||+||++++||||++++++
T Consensus 323 D~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 323 DAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp SEEEESHHHHHCTTHHHHHHH
T ss_pred eEEeecHHHHhCchHHHHHHc
Confidence 999999999999999999986
No 11
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=1.1e-33 Score=318.41 Aligned_cols=232 Identities=17% Similarity=0.228 Sum_probs=195.9
Q ss_pred CccccccCCCceEEccCcCc---------CCHHHHHHHHHcCCCcEEEeccccccc--cc--C----Cchh--------c
Q psy2378 2 NMINSKYNKRKISIAPMMNL---------TDRHCRMFHRQITRYSWLYTEMFTTQA--IL--G----NKKH--------C 56 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~---------td~~fR~~~~~~g~~~l~~tem~~~~~--l~--~----~~~~--------~ 56 (956)
.|++.++ +||+++|||++. |+.++++++++.| ++|++||+++++. .. + .... .
T Consensus 10 ~ig~~~l-~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (364)
T 1vyr_A 10 KVGAVTA-PNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT 87 (364)
T ss_dssp EETTEEE-SSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred eECCEEE-CCccEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence 4677787 999999999875 7889999998887 7999999987653 22 1 1111 1
Q ss_pred cccCCCCCCEEEEecC------------------------------------------CCH------------HHHHHHH
Q psy2378 57 LDFNAEEHPIAFQVGD------------------------------------------NEP------------KKLAKSA 82 (956)
Q Consensus 57 ~~~~~~~~p~~vQl~g------------------------------------------~~~------------~~~~~aA 82 (956)
...|..+.++++||++ ..| ++|+++|
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (364)
T 1vyr_A 88 AGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAV 167 (364)
T ss_dssp HHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 2358889999999984 234 6999999
Q ss_pred HHHHHcCCCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccC--CCC----C
Q psy2378 83 KIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIG--IDD----I 146 (956)
Q Consensus 83 ~~~~~~G~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g--~~~----~ 146 (956)
++++++|||+||||++| |..|.|+|+||+++++|++++.||+++||++++ .||.||++.+ |.+ .
T Consensus 168 ~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~ 247 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGP 247 (364)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCT
T ss_pred HHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCC
Confidence 99999999999999986 999999999999999999999999999999995 3999999996 432 3
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-
Q psy2378 147 NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 225 (956)
Q Consensus 147 ~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~- 225 (956)
.+.++..++++.|+++|+|+|++|+|+. .+ . ++..|++++++++.+ ++|||+||+| ++++++++++.
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~--~~---~-----~~~~~~~~~~v~~~~-~iPvi~~Ggi-t~~~a~~~l~~g 315 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDL--AG---G-----KPYSEAFRQKVRERF-HGVIIGAGAY-TAEKAEDLIGKG 315 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBT--TB---C-----CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcc--cC---C-----CcccHHHHHHHHHHC-CCCEEEECCc-CHHHHHHHHHCC
Confidence 3556788999999999999999998862 11 0 124688999999998 7999999999 89999999987
Q ss_pred -cCEEEEccccccCCcchHHHHH
Q psy2378 226 -IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 226 -ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
||+||+||++++||||++++++
T Consensus 316 ~aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 316 LIDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHH
T ss_pred CccEEEECHHHHhChhHHHHHHc
Confidence 9999999999999999999986
No 12
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=1.9e-33 Score=319.50 Aligned_cols=241 Identities=16% Similarity=0.135 Sum_probs=191.2
Q ss_pred CccccccCCCceEEccCcCcC-------CHHHHHHHH-HcCCCcEEEecccccccc--c--C----Cch-------h-cc
Q psy2378 2 NMINSKYNKRKISIAPMMNLT-------DRHCRMFHR-QITRYSWLYTEMFTTQAI--L--G----NKK-------H-CL 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~t-------d~~fR~~~~-~~g~~~l~~tem~~~~~l--~--~----~~~-------~-~~ 57 (956)
.|++.+. +||+++|||++.+ +...++..+ +.| ++|++||++++..- . + ... + ..
T Consensus 23 ~ig~~~L-~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G-~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~ 100 (402)
T 2hsa_B 23 KMGKFNL-SHRVVLAPMTRCRALNNIPQAALGEYYEQRATA-GGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVD 100 (402)
T ss_dssp EETTEEE-SCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCT-TCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred eECCEEe-cCCeEECCCCCCcCCCCCCCHHHHHHHHHHhcc-CCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHH
Confidence 4677787 9999999998764 444444433 335 89999999877532 1 1 111 1 12
Q ss_pred ccCCCCCCEEEEecC----------------------------------------CCH------------HHHHHHHHHH
Q psy2378 58 DFNAEEHPIAFQVGD----------------------------------------NEP------------KKLAKSAKII 85 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g----------------------------------------~~~------------~~~~~aA~~~ 85 (956)
..|..+.++++||++ ..| ++|++||+++
T Consensus 101 avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a 180 (402)
T 2hsa_B 101 VVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNA 180 (402)
T ss_dssp HHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 458889999999983 124 7999999999
Q ss_pred HHcCCCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccC-C----CCCCcHH
Q psy2378 86 QKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIG-I----DDINSYD 150 (956)
Q Consensus 86 ~~~G~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g-~----~~~~~~~ 150 (956)
+++|||+||||++| |..|.|+|+|||+++||++++.|||++||++++ .||+||++.+ | ++..+.+
T Consensus 181 ~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~ 260 (402)
T 2hsa_B 181 IEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLS 260 (402)
T ss_dssp HHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHH
T ss_pred HHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHH
Confidence 99999999999996 999999999999999999999999999999995 5999999986 2 2334556
Q ss_pred HHHHHHHHHHHcC------CCEEEEcccccccccCCCCCCCC-CCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAG------CRTFIVHARNAFLKKLNPKQNRK-IPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G------~~~i~vh~r~~~~~g~~~~~~~~-~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l 223 (956)
+..++++.|+++| +|+|++|+|+.. +....+.... .+..+|++++++++.+ ++|||+||+| +++++++++
T Consensus 261 ~~~~la~~le~~G~~gg~~vd~i~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vk~~~-~iPvi~~G~i-~~~~a~~~l 337 (402)
T 2hsa_B 261 LGLAVVERLNKIQLHSGSKLAYLHVTQPRYV-AYGQTEAGRLGSEEEEARLMRTLRNAY-QGTFICSGGY-TRELGIEAV 337 (402)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEEEEECCCCC-TTTTSSSTTTTHHHHHHHHHHHHHHHC-SSCEEEESSC-CHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccCCceEEEEEecCccc-cccCCccccccCCcchHHHHHHHHHHC-CCCEEEeCCC-CHHHHHHHH
Confidence 7899999999999 999999998631 1000000000 0113688899999998 7999999999 999999999
Q ss_pred hh--cCEEEEccccccCCcchHHHHH
Q psy2378 224 NY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 224 ~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+. ||+||+||++++||||++++++
T Consensus 338 ~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 338 AQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp HTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred HCCCCceeeecHHHHhCchHHHHHHh
Confidence 87 9999999999999999999986
No 13
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=3.2e-33 Score=311.60 Aligned_cols=241 Identities=15% Similarity=0.163 Sum_probs=195.0
Q ss_pred CccccccCCCceEEccCcC---------cCCHHHHHHH-HHcCCCcEEEeccccccccc----C----C--------chh
Q psy2378 2 NMINSKYNKRKISIAPMMN---------LTDRHCRMFH-RQITRYSWLYTEMFTTQAIL----G----N--------KKH 55 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~---------~td~~fR~~~-~~~g~~~l~~tem~~~~~l~----~----~--------~~~ 55 (956)
.|++.++ +||+++|||+. .|+....+.. |+.||++|++||.+....-- + . ++.
T Consensus 10 ~ig~~~l-~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~ 88 (340)
T 3gr7_A 10 TIRGLTL-KNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLREL 88 (340)
T ss_dssp EETTEEE-SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHH
T ss_pred eECCEEE-cCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHH
Confidence 4677788 99999999965 3566677654 56688999999976544321 0 0 111
Q ss_pred ccccCCCCCCEEEEecCC-----------------------C------------HHHHHHHHHHHHHcCCCEEEecCC--
Q psy2378 56 CLDFNAEEHPIAFQVGDN-----------------------E------------PKKLAKSAKIIQKWGYDEINLNCG-- 98 (956)
Q Consensus 56 ~~~~~~~~~p~~vQl~g~-----------------------~------------~~~~~~aA~~~~~~G~d~IeiN~g-- 98 (956)
....|..+.++++||+.. . .++|++||++++++|||+||||++
T Consensus 89 ~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~G 168 (340)
T 3gr7_A 89 VGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHG 168 (340)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTT
T ss_pred HHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc
Confidence 234578899999999631 0 378999999999999999999999
Q ss_pred -------CCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCC--CCCCcHHHHHHHHHHHHHcCCCEEEE
Q psy2378 99 -------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI--DDINSYDFVRDFVGTVSSAGCRTFIV 169 (956)
Q Consensus 99 -------CP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~--~~~~~~~~~~~~a~~l~~~G~~~i~v 169 (956)
||..|.|+|+|||++++|++++.||+++||++++.||+||++... +.+.+.++..++++.|+++|+|+|+|
T Consensus 169 yLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~v 248 (340)
T 3gr7_A 169 YLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDV 248 (340)
T ss_dssp CHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEE
T ss_pred hHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 599999999999999999999999999999999999999999852 11233456889999999999999999
Q ss_pred cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 170 HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 170 h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
|.+.... ......+..+|++++++++.+ ++|||+||+|.|+++++++++. ||+||+||++++||||++++++
T Consensus 249 s~g~~~~-----~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 249 SSGAIVP-----ARMNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp ECCCSSC-----CCCCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred ecCCccC-----CCCCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHH
Confidence 9543110 011112345899999999998 7999999999999999999987 9999999999999999999998
Q ss_pred hh
Q psy2378 248 NY 249 (956)
Q Consensus 248 ~~ 249 (956)
.+
T Consensus 323 ~l 324 (340)
T 3gr7_A 323 EL 324 (340)
T ss_dssp HT
T ss_pred HC
Confidence 65
No 14
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=2.1e-33 Score=317.05 Aligned_cols=234 Identities=15% Similarity=0.129 Sum_probs=189.2
Q ss_pred CccccccCCCceEEccCcCc-------CCHHHHHHHHHc-CCCcEEEeccccccccc----C----Cch-------hc-c
Q psy2378 2 NMINSKYNKRKISIAPMMNL-------TDRHCRMFHRQI-TRYSWLYTEMFTTQAIL----G----NKK-------HC-L 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~-------td~~fR~~~~~~-g~~~l~~tem~~~~~l~----~----~~~-------~~-~ 57 (956)
.|++.++ +||+++|||++. |+...++..++. | ++|++||+++++.-- + ... ++ .
T Consensus 21 ~ig~~~l-~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~ 98 (376)
T 1icp_A 21 KMGKFEL-CHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTN-GGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVD 98 (376)
T ss_dssp EETTEEE-SCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCT-TCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred eECCEEE-CCccEECCcCcCcCCCCCCCHHHHHHHHHhcCC-eeEEEECceeeccccccCcccCccCCHHHHHHHHHHHH
Confidence 3567777 999999999886 455655544333 6 799999998775321 1 011 11 2
Q ss_pred ccCCCCCCEEEEecC--------------------------------------CCH------------HHHHHHHHHHHH
Q psy2378 58 DFNAEEHPIAFQVGD--------------------------------------NEP------------KKLAKSAKIIQK 87 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g--------------------------------------~~~------------~~~~~aA~~~~~ 87 (956)
..|..+.++++||++ ..| ++|++||+++++
T Consensus 99 avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~~ 178 (376)
T 1icp_A 99 AVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIE 178 (376)
T ss_dssp HHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 458889999999986 123 699999999999
Q ss_pred cCCCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccCc-cEEEEeccC-C----CCCCcHHHH
Q psy2378 88 WGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIG-I----DDINSYDFV 152 (956)
Q Consensus 88 ~G~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g-~----~~~~~~~~~ 152 (956)
+|||+||||++| |..|.|+|+|||++++|++++.||+++||++++. ||+||++.. + +...+.++.
T Consensus 179 aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~ 258 (376)
T 1icp_A 179 AGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALG 258 (376)
T ss_dssp TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHH
T ss_pred cCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHH
Confidence 999999999997 9999999999999999999999999999999963 999999975 2 233445678
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVM 230 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~Vm 230 (956)
.++++.|+++|+|+|++|+|+.. +. +....+|++++++++.+ ++|||+||+| ++++++++++. ||+||
T Consensus 259 ~~la~~le~~Gvd~i~v~~~~~~-~~-------~~~~~~~~~~~~vr~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~ 328 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHVVEPRMK-TA-------WEKIECTESLVPMRKAY-KGTFIVAGGY-DREDGNRALIEDRADLVA 328 (376)
T ss_dssp HHHHHHHGGGCCSEEEEECCSCC-C-------------CCCCSHHHHHHC-CSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCccc-CC-------CCccccHHHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHCCCCcEEe
Confidence 99999999999999999988631 10 00113567788999998 7999999999 89999999987 99999
Q ss_pred EccccccCCcchHHHHH
Q psy2378 231 LGREAYKNPFLMSNFDL 247 (956)
Q Consensus 231 iGR~~l~~P~l~~~i~~ 247 (956)
+||++++||||++++++
T Consensus 329 ~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 329 YGRLFISNPDLPKRFEL 345 (376)
T ss_dssp ESHHHHHCTTHHHHHHH
T ss_pred ecHHHHhCccHHHHHHc
Confidence 99999999999999986
No 15
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=2.7e-33 Score=315.16 Aligned_cols=232 Identities=14% Similarity=0.142 Sum_probs=195.1
Q ss_pred CccccccCCCceEEccCcCc---------CCHHHHHHHHHcCCCcEEEeccccccc--cc--C----Cchh--------c
Q psy2378 2 NMINSKYNKRKISIAPMMNL---------TDRHCRMFHRQITRYSWLYTEMFTTQA--IL--G----NKKH--------C 56 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~---------td~~fR~~~~~~g~~~l~~tem~~~~~--l~--~----~~~~--------~ 56 (956)
.|++.+. +||+++|||++. ||.++++++++.| ++|++||+++++. .. + .... .
T Consensus 10 ~ig~~~l-~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (365)
T 2gou_A 10 TLGALTL-KNRIVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT 87 (365)
T ss_dssp EETTEEE-SSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred eECCEEE-cCceEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence 4677787 999999999886 4789999998887 7999999987653 22 1 1111 1
Q ss_pred cccCCCCCCEEEEecC------------------------------------------CCH------------HHHHHHH
Q psy2378 57 LDFNAEEHPIAFQVGD------------------------------------------NEP------------KKLAKSA 82 (956)
Q Consensus 57 ~~~~~~~~p~~vQl~g------------------------------------------~~~------------~~~~~aA 82 (956)
...|..+.++++||++ ..| ++|+++|
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (365)
T 2gou_A 88 EAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAA 167 (365)
T ss_dssp HHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 2357889999999984 123 7999999
Q ss_pred HHHHHcCCCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccCc-cEEEEecc-CCC----CCC
Q psy2378 83 KIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRI-GID----DIN 147 (956)
Q Consensus 83 ~~~~~~G~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~-g~~----~~~ 147 (956)
++++++|||+||||++| |..|.|+|+||+++++|++++.||+++||++++. ||.||++. ++. +..
T Consensus 168 ~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~ 247 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDAD 247 (365)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSS
T ss_pred HHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCC
Confidence 99999999999999997 9999999999999999999999999999999953 99999998 332 334
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--
Q psy2378 148 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-- 225 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-- 225 (956)
+.++..++++.|+++|+|+|++|+++. .+ . +...|++++++++.+ ++|||+|||| |+++++++++.
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~--~~---~-----~~~~~~~~~~i~~~~-~iPvi~~Ggi-~~~~a~~~l~~g~ 315 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDW--DD---A-----PDTPVSFKRALREAY-QGVLIYAGRY-NAEKAEQAINDGL 315 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBT--TB---C-----CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCc--CC---C-----CCccHHHHHHHHHHC-CCcEEEeCCC-CHHHHHHHHHCCC
Confidence 556789999999999999999999862 11 1 123578899999998 7999999999 99999999987
Q ss_pred cCEEEEccccccCCcchHHHHH
Q psy2378 226 IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 226 ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
||+||+||++++||||++++++
T Consensus 316 aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 316 ADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp CSEEECCHHHHHCTTHHHHHHH
T ss_pred cceehhcHHHHhCchHHHHHHc
Confidence 9999999999999999999986
No 16
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.98 E-value=1.6e-32 Score=305.05 Aligned_cols=236 Identities=18% Similarity=0.207 Sum_probs=191.9
Q ss_pred CccccccCCCceEEccCcC--------cCCHHHHHHH-HHcCCCcEEEeccccccccc-------C-Cc--------hhc
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LTDRHCRMFH-RQITRYSWLYTEMFTTQAIL-------G-NK--------KHC 56 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~td~~fR~~~-~~~g~~~l~~tem~~~~~l~-------~-~~--------~~~ 56 (956)
.|++.+. +||+++|||+. .|+....+.. |+.||++|++||.+....-- + .. +..
T Consensus 9 ~ig~~~l-~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~ 87 (343)
T 3kru_A 9 KIKDITI-KNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIV 87 (343)
T ss_dssp EETTEEE-SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHH
T ss_pred eeeeeee-eeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHH
Confidence 4677888 99999999965 4666777654 56688999999976544321 1 11 112
Q ss_pred cccCCCCCCEEEEecCC------------------------C------------HHHHHHHHHHHHHcCCCEEEec----
Q psy2378 57 LDFNAEEHPIAFQVGDN------------------------E------------PKKLAKSAKIIQKWGYDEINLN---- 96 (956)
Q Consensus 57 ~~~~~~~~p~~vQl~g~------------------------~------------~~~~~~aA~~~~~~G~d~IeiN---- 96 (956)
...|..+.++++||+.. . .++|++||++++++|||+||||
T Consensus 88 ~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahG 167 (343)
T 3kru_A 88 DICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHG 167 (343)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTT
T ss_pred HHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccc
Confidence 34577899999999631 0 3789999999999999999999
Q ss_pred -----CCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccC-CC-CCCcHHHHHHHHHHHHHcCCCEE
Q psy2378 97 -----CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG-ID-DINSYDFVRDFVGTVSSAGCRTF 167 (956)
Q Consensus 97 -----~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g-~~-~~~~~~~~~~~a~~l~~~G~~~i 167 (956)
|+||..|.|+|+|||++++|++++.|||++||+++ ++||+||++.. +. .+.+.++..++++.|+++ +|+|
T Consensus 168 YLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i 246 (343)
T 3kru_A 168 YLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLI 246 (343)
T ss_dssp SHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEE
T ss_pred hhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEE
Confidence 67999999999999999999999999999999999 68999999983 32 234567889999999999 9999
Q ss_pred EE-cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHH
Q psy2378 168 IV-HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 168 ~v-h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~ 244 (956)
++ ++++.. ......+..+|++++++++.+ ++|||+||+|.|+++++++++. ||+||+||++++||||+++
T Consensus 247 ~vs~g~~~~------~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k 319 (343)
T 3kru_A 247 DVSSGGLLN------VDINLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLH 319 (343)
T ss_dssp EEECCCSSC------CCCCCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred eccCCceEe------eeecccCceeehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEE
Confidence 99 465421 011112345899999999998 7999999999999999999987 9999999999999999999
Q ss_pred HH
Q psy2378 245 FD 246 (956)
Q Consensus 245 i~ 246 (956)
++
T Consensus 320 ~~ 321 (343)
T 3kru_A 320 TY 321 (343)
T ss_dssp TC
T ss_pred Ee
Confidence 87
No 17
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=99.97 E-value=8.8e-33 Score=265.96 Aligned_cols=100 Identities=34% Similarity=0.574 Sum_probs=91.4
Q ss_pred cccCceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHH
Q psy2378 420 AQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIE 499 (956)
Q Consensus 420 ~~e~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~ 499 (956)
+++.+++++||||+||||+++++|+++++|||||||||||||+|+||||||+++++|||++++++++||+||||||+|+|
T Consensus 44 v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~e 123 (156)
T 3nq4_A 44 VKDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEYVAGGASNGLASVAQDSGVPVAFGVLTTESIE 123 (156)
T ss_dssp CCTTSEEEEEESSTTTHHHHHHHHHHHCSCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESCHH
T ss_pred CcccceEEEEcCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCCCHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCceeEEEeccccchHH
Q psy2378 500 QANSRILTKGEIIIFINHKNKSLVN 524 (956)
Q Consensus 500 qa~~r~~~~~~~~~~~~~~~~~~~~ 524 (956)
||++|++.|.+ |+|.+++..
T Consensus 124 QA~~Rag~~~~-----nKG~eaA~a 143 (156)
T 3nq4_A 124 QAIERAGTKAG-----NKGAEAALT 143 (156)
T ss_dssp HHHHHBTSTTC-----BHHHHHHHH
T ss_pred HHHHHhCCccc-----ccHHHHHHH
Confidence 99999998644 455555543
No 18
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.97 E-value=5.4e-32 Score=308.43 Aligned_cols=242 Identities=10% Similarity=0.099 Sum_probs=193.0
Q ss_pred cccccCCCceEEccCcC--------cCCHHHHHHHHHcCCCcEEEeccccccccc----C----C--------chhcccc
Q psy2378 4 INSKYNKRKISIAPMMN--------LTDRHCRMFHRQITRYSWLYTEMFTTQAIL----G----N--------KKHCLDF 59 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~--------~td~~fR~~~~~~g~~~l~~tem~~~~~l~----~----~--------~~~~~~~ 59 (956)
++.+. +|||++|||+. +|+...++..++.+|++|++||.+.+..-- + . ++.....
T Consensus 35 g~~~l-kNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~av 113 (419)
T 3l5a_A 35 NGIKI-SNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTM 113 (419)
T ss_dssp TSCEE-SSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHHHH
T ss_pred CCCEE-CCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHHHH
Confidence 56777 99999999965 577788887766667899999976554321 1 1 1112345
Q ss_pred CCCCCCEEEEecCCC----------------------------------------HHHHHHHHHHHHHcCCCEEEecCCC
Q psy2378 60 NAEEHPIAFQVGDNE----------------------------------------PKKLAKSAKIIQKWGYDEINLNCGC 99 (956)
Q Consensus 60 ~~~~~p~~vQl~g~~----------------------------------------~~~~~~aA~~~~~~G~d~IeiN~gC 99 (956)
|..+.++++||+... .++|++||++|+++|||+||||++|
T Consensus 114 h~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ah 193 (419)
T 3l5a_A 114 KQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQ 193 (419)
T ss_dssp HTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred HhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 788999999997311 2689999999999999999999997
Q ss_pred ---------CcceeeeCcccccc-cCChHHHHHHHHHHhhcc------CccEEEEeccCC--CC--CCcHHHHHHHHHHH
Q psy2378 100 ---------PSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSV------EIDITVKHRIGI--DD--INSYDFVRDFVGTV 159 (956)
Q Consensus 100 ---------P~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~------~~pv~vKir~g~--~~--~~~~~~~~~~a~~l 159 (956)
|..|.|+|+|||++ +||++++.||+++||+++ ++||+||++... ++ +.+.+++.++++.|
T Consensus 194 GYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L 273 (419)
T 3l5a_A 194 RLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWV 273 (419)
T ss_dssp TSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHH
T ss_pred chHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHH
Confidence 99999999999999 999999999999999998 579999998731 11 22356789999999
Q ss_pred HH-cCCCEEEEcccccccccCCCCCCCCCC-cCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhhcCEEEEccccc
Q psy2378 160 SS-AGCRTFIVHARNAFLKKLNPKQNRKIP-ILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNYIDGVMLGREAY 236 (956)
Q Consensus 160 ~~-~G~~~i~vh~r~~~~~g~~~~~~~~~~-~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l 236 (956)
++ +|+|+|+||+++.....+. ....+ ..+|+.++.+++.++ ++|||+||+|.|+++|+++++.||+|++||+++
T Consensus 274 ~~~~Gvd~I~vs~g~~~~~~~~---~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~aDlVaiGR~~I 350 (419)
T 3l5a_A 274 MDVSNIQYLAIASWGRHIYQNT---SRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADMVGMSSPFV 350 (419)
T ss_dssp HHHSCCCCEEECCTTCCGGGCB---CCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGGCSEEEESTHHH
T ss_pred HhhcCCcEEEEeeCCccccccc---cCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHhCCcHHHHHHHH
Confidence 99 9999999998863111111 11122 236778889998874 599999999999999999998899999999999
Q ss_pred cCCcchHHHHHhh
Q psy2378 237 KNPFLMSNFDLNY 249 (956)
Q Consensus 237 ~~P~l~~~i~~~~ 249 (956)
+||||++++++..
T Consensus 351 anPdlv~ki~~G~ 363 (419)
T 3l5a_A 351 TEPDFVHKLAEQR 363 (419)
T ss_dssp HCTTHHHHHHTTC
T ss_pred HCcHHHHHHHcCC
Confidence 9999999998743
No 19
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.97 E-value=2.4e-31 Score=298.27 Aligned_cols=241 Identities=16% Similarity=0.212 Sum_probs=193.9
Q ss_pred CccccccCCCceEEccCcC--------cCCHHHHHHH-HHcCCCcEEEeccccccccc-------C-Cc--------hhc
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LTDRHCRMFH-RQITRYSWLYTEMFTTQAIL-------G-NK--------KHC 56 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~td~~fR~~~-~~~g~~~l~~tem~~~~~l~-------~-~~--------~~~ 56 (956)
.|++.++ +||+++|||+. .|+....+.. |+.||++|++||.+.+..-- + .. +..
T Consensus 9 ~ig~~~l-~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~ 87 (349)
T 3hgj_A 9 ELGGLRL-KNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELA 87 (349)
T ss_dssp EETTEEE-SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHH
T ss_pred eECCEEe-cCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHH
Confidence 4677788 99999999975 4566777654 56688999999976444321 1 11 112
Q ss_pred cccCCCCCCEEEEecCC---------------------------------C------------HHHHHHHHHHHHHcCCC
Q psy2378 57 LDFNAEEHPIAFQVGDN---------------------------------E------------PKKLAKSAKIIQKWGYD 91 (956)
Q Consensus 57 ~~~~~~~~p~~vQl~g~---------------------------------~------------~~~~~~aA~~~~~~G~d 91 (956)
...|..+.++++||+.. . .++|++||++++++|||
T Consensus 88 ~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfD 167 (349)
T 3hgj_A 88 RRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGFQ 167 (349)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34577899999999631 0 36899999999999999
Q ss_pred EEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCC--CCCCcHHHHHHHHHH
Q psy2378 92 EINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGI--DDINSYDFVRDFVGT 158 (956)
Q Consensus 92 ~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~--~~~~~~~~~~~~a~~ 158 (956)
+||||++| |..|.|+|+||+++++|++++.||+++||+++ ++||.||++... +.+.+.++..++++.
T Consensus 168 gVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~ 247 (349)
T 3hgj_A 168 VIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARR 247 (349)
T ss_dssp EEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHH
T ss_pred EEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999999 689999999731 122345678999999
Q ss_pred HHHcCCCEEEEcc-cccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEcccc
Q psy2378 159 VSSAGCRTFIVHA-RNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREA 235 (956)
Q Consensus 159 l~~~G~~~i~vh~-r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~ 235 (956)
|+++|+|+|++|. +... .. .....+..++++++++++.+ ++|||++|+|.|+++++++++. ||+|++||++
T Consensus 248 L~~~Gvd~i~vs~g~~~~-~~----~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~ 321 (349)
T 3hgj_A 248 LKELGVDLLDCSSGGVVL-RV----RIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVL 321 (349)
T ss_dssp HHHTTCCEEEEECCCSCS-SS----CCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHH
T ss_pred HHHcCCCEEEEecCCcCc-cc----ccCCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEEecHHH
Confidence 9999999999994 4310 00 00112336889999999988 7999999999999999999987 9999999999
Q ss_pred ccCCcchHHHHHhh
Q psy2378 236 YKNPFLMSNFDLNY 249 (956)
Q Consensus 236 l~~P~l~~~i~~~~ 249 (956)
++||+|++++++.+
T Consensus 322 lanPdl~~k~~~~l 335 (349)
T 3hgj_A 322 LRDPYFPLRAAKAL 335 (349)
T ss_dssp HHCTTHHHHHHHHT
T ss_pred HhCchHHHHHHHHC
Confidence 99999999999866
No 20
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=99.97 E-value=2.3e-32 Score=263.84 Aligned_cols=99 Identities=33% Similarity=0.539 Sum_probs=89.9
Q ss_pred ccCceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHHH
Q psy2378 421 QEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQ 500 (956)
Q Consensus 421 ~e~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~q 500 (956)
++.+|+++||||+||||+++|+|+++++|||||||||||||+|+||||||+++++|||++++++++||+||||||+|+||
T Consensus 50 ~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~eQ 129 (159)
T 1kz1_A 50 KLENIDIESVPGSWELPQGIRASIARNTYDAVIGIGVLIKGSTMHFEYISEAVVHGLMRVGLDSGVPVILGLLTVLNEEQ 129 (159)
T ss_dssp CGGGEEEEECSSGGGHHHHHHHHHHHSCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESSHHH
T ss_pred CccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHHH
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc-ccCceeEEEeccccchHH
Q psy2378 501 ANSRIL-TKGEIIIFINHKNKSLVN 524 (956)
Q Consensus 501 a~~r~~-~~~~~~~~~~~~~~~~~~ 524 (956)
|++|++ +|.+ |.|.+++..
T Consensus 130 A~~Rag~~~~~-----nKG~eaA~a 149 (159)
T 1kz1_A 130 ALYRAGLNGGH-----NHGNDWGSA 149 (159)
T ss_dssp HHHHBTCTTCC-----BHHHHHHHH
T ss_pred HHHHhCCcccc-----chHHHHHHH
Confidence 999998 4422 456555543
No 21
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=99.97 E-value=2.5e-32 Score=263.95 Aligned_cols=106 Identities=33% Similarity=0.534 Sum_probs=93.2
Q ss_pred ccccccccc--CceEEEEcCCcccHHHHHHHHHhc-----cCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCc
Q psy2378 414 DGTMARAQE--KNILHISVPGALEIPLALKNIIQI-----KKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNI 486 (956)
Q Consensus 414 ~g~~~~~~e--~~i~~~~vpg~~e~p~~~~~~~~~-----~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~ 486 (956)
+|+.+.+.+ .+++++||||+||||+++|+|+++ ++|||||||||||||+|+||||||+++++|||++++++++
T Consensus 32 ~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~vsl~~~v 111 (157)
T 2i0f_A 32 DGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESI 111 (157)
T ss_dssp HHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEEEEECCSSSTTHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCC
Confidence 355554444 468999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCCHHHHHhhhcccCceeEEEeccccchHH
Q psy2378 487 PIINAILTTETIEQANSRILTKGEIIIFINHKNKSLVN 524 (956)
Q Consensus 487 pv~~gvlt~~~~~qa~~r~~~~~~~~~~~~~~~~~~~~ 524 (956)
||+||||||+|+|||++|++.+.+ |+|.+++..
T Consensus 112 PV~~GVLT~~~~eQA~~Rag~~~~-----nkG~eaA~a 144 (157)
T 2i0f_A 112 AIGNGILTVENEEQAWVHARREDK-----DKGGFAARA 144 (157)
T ss_dssp CEEEEEEEESSHHHHHHHHCTTTT-----CHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHhCcccc-----ccHHHHHHH
Confidence 999999999999999999986544 345555533
No 22
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=99.97 E-value=1.9e-32 Score=264.03 Aligned_cols=107 Identities=21% Similarity=0.476 Sum_probs=93.6
Q ss_pred ccccccccc----CceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEE
Q psy2378 414 DGTMARAQE----KNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPII 489 (956)
Q Consensus 414 ~g~~~~~~e----~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~ 489 (956)
+|+.+.+.+ .+++++||||+||||+++|+|+++++|||||||||||||+|+||||||+++++|||++++++++||+
T Consensus 33 ~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~v~L~~~vPV~ 112 (156)
T 1c2y_A 33 EGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNSGVPCV 112 (156)
T ss_dssp HHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHTTCCSEEEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 355544433 4689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhhcccCceeEEEeccccchHHH
Q psy2378 490 NAILTTETIEQANSRILTKGEIIIFINHKNKSLVNL 525 (956)
Q Consensus 490 ~gvlt~~~~~qa~~r~~~~~~~~~~~~~~~~~~~~~ 525 (956)
||||||+|+|||++|++.+.+ |.|.+++..-
T Consensus 113 ~GVLT~~~~eQA~~Rag~~~~-----nKG~eaA~aA 143 (156)
T 1c2y_A 113 FGVLTCDNMDQAINRAGGKAG-----NKGAESALTA 143 (156)
T ss_dssp EEEECCSSHHHHHHHEEETTE-----EHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHcCCccc-----chHHHHHHHH
Confidence 999999999999999986543 4555555443
No 23
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=99.97 E-value=4e-32 Score=262.13 Aligned_cols=103 Identities=35% Similarity=0.548 Sum_probs=92.3
Q ss_pred cccCceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHH
Q psy2378 420 AQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIE 499 (956)
Q Consensus 420 ~~e~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~ 499 (956)
+++.+|+++||||+||||+++|+|+++++|||||||||||||+|+||||||+++++|||++++++++||+|||||++|+|
T Consensus 43 v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIalG~VIrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV~~GVLT~~~~e 122 (154)
T 1hqk_A 43 GREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGVLIRGATPHFDYIASEVSKGLANLSLELRKPITFGVITADTLE 122 (154)
T ss_dssp CCGGGEEEEEESSGGGHHHHHHHHHTCTTCCEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTSCEEEEEEEESSHH
T ss_pred CCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCceeEEEeccccchHHHHh
Q psy2378 500 QANSRILTKGEIIIFINHKNKSLVNLIK 527 (956)
Q Consensus 500 qa~~r~~~~~~~~~~~~~~~~~~~~~~~ 527 (956)
||++|++.+.+ |.|.+++..-+.
T Consensus 123 QA~~Rag~~~~-----nkG~eaA~aale 145 (154)
T 1hqk_A 123 QAIERAGTKHG-----NKGWEAALSAIE 145 (154)
T ss_dssp HHHHHEEETTE-----EHHHHHHHHHHH
T ss_pred HHHHHhccccc-----chHHHHHHHHHH
Confidence 99999987543 456555544333
No 24
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=99.97 E-value=7.5e-32 Score=259.76 Aligned_cols=102 Identities=38% Similarity=0.579 Sum_probs=91.7
Q ss_pred cccCceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHH
Q psy2378 420 AQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIE 499 (956)
Q Consensus 420 ~~e~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~ 499 (956)
+++.+|+++||||+||||+++|+|+++++|||||||||||||+|+||||||+++++|||++++++++||+||||||+|+|
T Consensus 43 v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV~~GVLT~~~~e 122 (154)
T 1rvv_A 43 VDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIE 122 (154)
T ss_dssp CCGGGEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHCSCEEEEEEEESSHH
T ss_pred CCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhhCCCEEEEecCCCCHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCceeEEEeccccchHHHH
Q psy2378 500 QANSRILTKGEIIIFINHKNKSLVNLI 526 (956)
Q Consensus 500 qa~~r~~~~~~~~~~~~~~~~~~~~~~ 526 (956)
||++|++.+.+ |.|.+++..-+
T Consensus 123 QA~~Rag~~~~-----nkG~eaA~aal 144 (154)
T 1rvv_A 123 QAIERAGTKAG-----NKGVDCAVSAI 144 (154)
T ss_dssp HHHHTEEETTE-----EHHHHHHHHHH
T ss_pred HHHHHhccccc-----chHHHHHHHHH
Confidence 99999987543 45555554433
No 25
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.97 E-value=2.4e-31 Score=297.04 Aligned_cols=227 Identities=15% Similarity=0.163 Sum_probs=185.4
Q ss_pred CccccccCCCceEEccCcC--------cCCHHHHHHHHHcCCCcEEEeccccccccc-------C-C--------chhcc
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LTDRHCRMFHRQITRYSWLYTEMFTTQAIL-------G-N--------KKHCL 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~td~~fR~~~~~~g~~~l~~tem~~~~~l~-------~-~--------~~~~~ 57 (956)
.|++.++ +|||++|||+. .|+...++..++.. ++|++||.+.+..-- + . ++...
T Consensus 17 ~ig~~~l-kNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 94 (361)
T 3gka_A 17 TIGDLTL-ANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRLVTD 94 (361)
T ss_dssp EETTEEE-SCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred eECCEEe-cCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHHHHHHHHHH
Confidence 4677888 99999999966 45667777665555 689999976554321 1 1 11123
Q ss_pred ccCCCCCCEEEEecCC------------------------------------C------------HHHHHHHHHHHHHcC
Q psy2378 58 DFNAEEHPIAFQVGDN------------------------------------E------------PKKLAKSAKIIQKWG 89 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~------------------------------------~------------~~~~~~aA~~~~~~G 89 (956)
..|..+.++++||+.. . .++|++||++++++|
T Consensus 95 avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~A~~aG 174 (361)
T 3gka_A 95 AVHAAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAENARAAG 174 (361)
T ss_dssp HHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4577899999999620 0 268999999999999
Q ss_pred CCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccCc-cEEEEeccC-----CCCCCcHHHHHH
Q psy2378 90 YDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIG-----IDDINSYDFVRD 154 (956)
Q Consensus 90 ~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g-----~~~~~~~~~~~~ 154 (956)
||+||||++| |..|.|+|+|||+++||++++.||+++||++++. ||+||++.. +...++.++..+
T Consensus 175 fDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~ 254 (361)
T 3gka_A 175 FDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGH 254 (361)
T ss_dssp CSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHH
T ss_pred CCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHH
Confidence 9999999998 9999999999999999999999999999999953 999999973 222333567889
Q ss_pred HHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEc
Q psy2378 155 FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLG 232 (956)
Q Consensus 155 ~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiG 232 (956)
+++.|+++|+|+|++|+++. + + +.++++++.+ ++|||+||+| |+++++++++. ||+||+|
T Consensus 255 la~~l~~~Gvd~i~v~~~~~---~----------~---~~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 255 VARELGRRRIAFLFARESFG---G----------D---AIGQQLKAAF-GGPFIVNENF-TLDSAQAALDAGQADAVAWG 316 (361)
T ss_dssp HHHHHHHTTCSEEEEECCCS---T----------T---CCHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHcCCCEEEECCCCC---C----------H---HHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 99999999999999998751 1 1 3478888888 7999999999 99999999987 9999999
Q ss_pred cccccCCcchHHHHHh
Q psy2378 233 REAYKNPFLMSNFDLN 248 (956)
Q Consensus 233 R~~l~~P~l~~~i~~~ 248 (956)
|++++||||++++++.
T Consensus 317 R~~ladPdl~~k~~~g 332 (361)
T 3gka_A 317 KLFIANPDLPRRFKLN 332 (361)
T ss_dssp HHHHHCTTHHHHHHHT
T ss_pred HHhHhCcHHHHHHHhC
Confidence 9999999999999973
No 26
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.97 E-value=3.1e-31 Score=296.23 Aligned_cols=227 Identities=15% Similarity=0.171 Sum_probs=185.1
Q ss_pred CccccccCCCceEEccCcC--------cCCHHHHHHHHHcCCCcEEEeccccccccc-------C-C--------chhcc
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LTDRHCRMFHRQITRYSWLYTEMFTTQAIL-------G-N--------KKHCL 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~td~~fR~~~~~~g~~~l~~tem~~~~~l~-------~-~--------~~~~~ 57 (956)
.|++.++ +|||++|||+. .|+...++..++.. ++|++||.+.+..-- + . ++...
T Consensus 9 ~ig~~~l-kNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 86 (362)
T 4ab4_A 9 KLGDLQL-PNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNNVTK 86 (362)
T ss_dssp EETTEEE-SCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred eECCEEe-eCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHHHHH
Confidence 4677888 99999999966 35667777665555 689999976544321 1 1 11123
Q ss_pred ccCCCCCCEEEEecCC------------------------------------C------------HHHHHHHHHHHHHcC
Q psy2378 58 DFNAEEHPIAFQVGDN------------------------------------E------------PKKLAKSAKIIQKWG 89 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~------------------------------------~------------~~~~~~aA~~~~~~G 89 (956)
..|..+.++++||+.. . .++|++||++++++|
T Consensus 87 avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a~~aG 166 (362)
T 4ab4_A 87 AVHAAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENAKAAG 166 (362)
T ss_dssp HHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4577899999999620 0 267999999999999
Q ss_pred CCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccCc-cEEEEeccCCC-----CCCcHHHHHH
Q psy2378 90 YDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIGID-----DINSYDFVRD 154 (956)
Q Consensus 90 ~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~g~~-----~~~~~~~~~~ 154 (956)
||+||||++| |..|.|+|+|||+++||++++.||+++||++++. ||+||++.... ..++.++..+
T Consensus 167 fDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~ 246 (362)
T 4ab4_A 167 FDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTY 246 (362)
T ss_dssp CSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHH
T ss_pred CCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHH
Confidence 9999999998 9999999999999999999999999999999953 99999997421 1223457889
Q ss_pred HHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEc
Q psy2378 155 FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLG 232 (956)
Q Consensus 155 ~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiG 232 (956)
+++.|+++|+|+|++|+++. + . +.++++++.+ ++|||+||+| |+++++++++. ||+||+|
T Consensus 247 la~~l~~~Gvd~i~v~~~~~---~---~----------~~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 247 VARELGKRGIAFICSREREA---D---D----------SIGPLIKEAF-GGPYIVNERF-DKASANAALASGKADAVAFG 308 (362)
T ss_dssp HHHHHHHTTCSEEEEECCCC---T---T----------CCHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHhCCCEEEECCCCC---C---H----------HHHHHHHHHC-CCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 99999999999999998751 1 1 2478888888 7999999999 99999999987 9999999
Q ss_pred cccccCCcchHHHHHh
Q psy2378 233 REAYKNPFLMSNFDLN 248 (956)
Q Consensus 233 R~~l~~P~l~~~i~~~ 248 (956)
|++++||||++++++.
T Consensus 309 R~~lanPdl~~k~~~g 324 (362)
T 4ab4_A 309 VPFIANPDLPARLAAD 324 (362)
T ss_dssp HHHHHCTTHHHHHHTT
T ss_pred HHhHhCcHHHHHHHcC
Confidence 9999999999999873
No 27
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=99.97 E-value=5.2e-32 Score=264.24 Aligned_cols=107 Identities=34% Similarity=0.504 Sum_probs=94.4
Q ss_pred cccCceEEEEcCCcccHHHHHHHHHh-----ccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecC
Q psy2378 420 AQEKNILHISVPGALEIPLALKNIIQ-----IKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILT 494 (956)
Q Consensus 420 ~~e~~i~~~~vpg~~e~p~~~~~~~~-----~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt 494 (956)
+++.+|+++||||+||||+++++|++ +++|||||||||||||+|+||||||+++++|||++++++++||+|||||
T Consensus 47 v~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~vsL~~~vPV~~GVLT 126 (168)
T 1ejb_A 47 VEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIGVLIKGSTMHFEYISDSTTHALMNLQEKVDMPVIFGLLT 126 (168)
T ss_dssp CCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHTSCBCCEEEE
T ss_pred CCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 34567899999999999999999998 6889999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcccCceeEEEeccccchHHHHh
Q psy2378 495 TETIEQANSRILTKGEIIIFINHKNKSLVNLIK 527 (956)
Q Consensus 495 ~~~~~qa~~r~~~~~~~~~~~~~~~~~~~~~~~ 527 (956)
++|+|||++|++.+.+ ..+.|+|.+++..-+.
T Consensus 127 ~~~~eQA~~Rag~~~~-~~~~nkG~eaA~aAle 158 (168)
T 1ejb_A 127 CMTEEQALARAGIDEA-HSMHNHGEDWGAAAVE 158 (168)
T ss_dssp ESSHHHHHHHBTCSTT-CCSCBHHHHHHHHHHH
T ss_pred CCCHHHHHHhcCcccc-ccccchHHHHHHHHHH
Confidence 9999999999988653 1234667777655444
No 28
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.97 E-value=8.7e-31 Score=295.08 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=194.5
Q ss_pred CccccccCCCceEEccCcC-------cCCHHHHHHH-HHcCCCcEEEeccccccccc-------C-Cc--------hhcc
Q psy2378 2 NMINSKYNKRKISIAPMMN-------LTDRHCRMFH-RQITRYSWLYTEMFTTQAIL-------G-NK--------KHCL 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~-------~td~~fR~~~-~~~g~~~l~~tem~~~~~l~-------~-~~--------~~~~ 57 (956)
.|++.++ +||+++|||+. .|+....+.. |+.||++|++||.+.+..-- + .. +...
T Consensus 9 ~ig~~~l-~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~ 87 (363)
T 3l5l_A 9 TLKDVTL-RNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQ 87 (363)
T ss_dssp EETTEEE-SSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHHHH
T ss_pred eECCEEe-eCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHHHH
Confidence 4677788 99999999985 4677777754 66688999999976554321 1 11 1123
Q ss_pred ccCCCCCCEEEEecCC------------------------------------C----------------HHHHHHHHHHH
Q psy2378 58 DFNAEEHPIAFQVGDN------------------------------------E----------------PKKLAKSAKII 85 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~------------------------------------~----------------~~~~~~aA~~~ 85 (956)
..|..+.++++||++. . .++|++||+++
T Consensus 88 ~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a 167 (363)
T 3l5l_A 88 AIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRA 167 (363)
T ss_dssp HHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 4577889999999631 0 26799999999
Q ss_pred HHcCCCEEEecCC---------CCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCC-CC-C-CcHHH
Q psy2378 86 QKWGYDEINLNCG---------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGI-DD-I-NSYDF 151 (956)
Q Consensus 86 ~~~G~d~IeiN~g---------CP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~-~~-~-~~~~~ 151 (956)
+++|||+||||++ ||..|.|+|+||++++||++++.||+++||+++ ++||.||++... .+ + .+.++
T Consensus 168 ~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~ 247 (363)
T 3l5l_A 168 RDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEE 247 (363)
T ss_dssp HHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHH
T ss_pred HHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHH
Confidence 9999999999987 799999999999999999999999999999999 579999999742 11 1 34567
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCC-CCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNR-KIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 228 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~-~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~ 228 (956)
..++++.|+++|+|+|++|.++... .... ..+..++++++++++.+ ++|||++|+|.|+++++++++. ||+
T Consensus 248 ~~~la~~L~~~Gvd~i~vs~g~~~~-----~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~aD~ 321 (363)
T 3l5l_A 248 SIELARRFKAGGLDLLSVSVGFTIP-----DTNIPWGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQLDL 321 (363)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSS-----CCCCCCCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCEEEEecCcccc-----ccccCCCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCCccE
Confidence 8999999999999999999764210 0011 11235789999999988 7999999999999999999987 999
Q ss_pred EEEccccccCCcchHHHHHhh
Q psy2378 229 VMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 229 VmiGR~~l~~P~l~~~i~~~~ 249 (956)
|++||++++||+|++++++.+
T Consensus 322 V~iGR~~lanPdl~~k~~~~l 342 (363)
T 3l5l_A 322 VSVGRAHLADPHWAYFAAKEL 342 (363)
T ss_dssp EECCHHHHHCTTHHHHHHHHT
T ss_pred EEecHHHHhCchHHHHHHHHc
Confidence 999999999999999999865
No 29
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=2.2e-30 Score=316.98 Aligned_cols=243 Identities=15% Similarity=0.185 Sum_probs=193.7
Q ss_pred CccccccCCCceEEccCcC-cCC--HHHHHHH-----HHcCCCcEEEecccccccc--c--C----Cchh--------cc
Q psy2378 2 NMINSKYNKRKISIAPMMN-LTD--RHCRMFH-----RQITRYSWLYTEMFTTQAI--L--G----NKKH--------CL 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~-~td--~~fR~~~-----~~~g~~~l~~tem~~~~~l--~--~----~~~~--------~~ 57 (956)
.|++.++ +||+++|||++ .++ .+++.++ |+.||++|++||+++++.- . + .... ..
T Consensus 10 ~ig~~~l-~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (671)
T 1ps9_A 10 DLGFTTL-KNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITE 88 (671)
T ss_dssp ECSSCEE-SSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHH
T ss_pred eECCEEE-cCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHH
Confidence 4678888 99999999997 444 2344333 3446789999999876532 1 1 0111 12
Q ss_pred ccCCCCCCEEEEecCC----------------------CH------------HHHHHHHHHHHHcCCCEEEecCCC----
Q psy2378 58 DFNAEEHPIAFQVGDN----------------------EP------------KKLAKSAKIIQKWGYDEINLNCGC---- 99 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~----------------------~~------------~~~~~aA~~~~~~G~d~IeiN~gC---- 99 (956)
..|..+.++++||++. .| ++|+++|++++++|||+||||++|
T Consensus 89 ~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~ 168 (671)
T 1ps9_A 89 AVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLI 168 (671)
T ss_dssp HHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHH
T ss_pred HHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHH
Confidence 3578899999999974 34 789999999999999999999996
Q ss_pred -----CcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCC--CCCCcHHHHHHHHHHHHHcCCCEEEEc
Q psy2378 100 -----PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGI--DDINSYDFVRDFVGTVSSAGCRTFIVH 170 (956)
Q Consensus 100 -----P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~--~~~~~~~~~~~~a~~l~~~G~~~i~vh 170 (956)
|..|.|+|+||+++++|++++.||+++||+++ ++||++|++... ..+.+.++..++++.|+++|+|+|++|
T Consensus 169 ~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 169 NEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp HHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcC
Confidence 99999999999999999999999999999999 789999999732 123345678999999999999999999
Q ss_pred ccccccccCCCCCCCCCCc-CcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 171 ARNAFLKKLNPKQNRKIPI-LKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 171 ~r~~~~~g~~~~~~~~~~~-~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+|+. ....+....+.++ ..+++++++++.+ ++|||++|+|.++++++++++. ||+||+||++++||||++++++
T Consensus 249 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~ 325 (671)
T 1ps9_A 249 IGWH--EARIPTIATPVPRGAFSWVTRKLKGHV-SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQS 325 (671)
T ss_dssp ECBT--TCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHT
T ss_pred CCcc--ccccccccccCCcchHHHHHHHHHHhc-CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHc
Confidence 8752 1111111122233 3468899999988 8999999999999999999987 9999999999999999999986
Q ss_pred h
Q psy2378 248 N 248 (956)
Q Consensus 248 ~ 248 (956)
.
T Consensus 326 g 326 (671)
T 1ps9_A 326 G 326 (671)
T ss_dssp T
T ss_pred C
Confidence 4
No 30
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=99.97 E-value=1.2e-31 Score=259.87 Aligned_cols=89 Identities=21% Similarity=0.484 Sum_probs=84.7
Q ss_pred ccCceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHHH
Q psy2378 421 QEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQ 500 (956)
Q Consensus 421 ~e~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~q 500 (956)
++++++++||||+||||+++|+|+++++|||||||||||||+|+||||||+++++|||++++++++||+|||||++|.||
T Consensus 42 ~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eq 121 (158)
T 1di0_A 42 GSVEVEIFDVPGAYEIPLHAKTLARTGRYAAIVGAAFVIDGGIYDHDFVATAVINGMMQVQLETEVPVLSVVLTPHHFHE 121 (158)
T ss_dssp TSEEEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEEEEECBSSCCC
T ss_pred CccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEEEecCCCCHHH
Confidence 44579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccC
Q psy2378 501 ANSRILTKG 509 (956)
Q Consensus 501 a~~r~~~~~ 509 (956)
|++|++.++
T Consensus 122 A~er~~~~~ 130 (158)
T 1di0_A 122 SKEHHDFFH 130 (158)
T ss_dssp SHHHHHHHH
T ss_pred HHHHhhhhc
Confidence 999995444
No 31
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=99.97 E-value=3.8e-31 Score=256.11 Aligned_cols=106 Identities=28% Similarity=0.457 Sum_probs=90.8
Q ss_pred ccccccccC---ceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEE
Q psy2378 415 GTMARAQEK---NILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINA 491 (956)
Q Consensus 415 g~~~~~~e~---~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~g 491 (956)
|+.+.++++ +++++||||+||||+++|+|++ +|||||||||||||+|+||||||+++++|||++++++++||+||
T Consensus 38 gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~--~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~G 115 (160)
T 2c92_A 38 GARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR--NHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANG 115 (160)
T ss_dssp HHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT--SCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh--cCCEEEEEeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 555554444 6799999999999999999996 59999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhhcccCceeEEEeccccchHHH
Q psy2378 492 ILTTETIEQANSRILTKGEIIIFINHKNKSLVNL 525 (956)
Q Consensus 492 vlt~~~~~qa~~r~~~~~~~~~~~~~~~~~~~~~ 525 (956)
|||++|+|||++|++.++.. -|.|.+++..-
T Consensus 116 VLT~~~~eQA~~Rag~~~~~---~nKG~eaA~aa 146 (160)
T 2c92_A 116 VLTTNTEEQALDRAGLPTSA---EDKGAQATVAA 146 (160)
T ss_dssp EEEESSHHHHHTTBTCTTCS---CBHHHHHHHHH
T ss_pred EcCCCCHHHHHHHhcccccc---chhHHHHHHHH
Confidence 99999999999999875421 23455555443
No 32
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=99.97 E-value=1.3e-31 Score=259.46 Aligned_cols=89 Identities=20% Similarity=0.455 Sum_probs=84.5
Q ss_pred ccCceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHHH
Q psy2378 421 QEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQ 500 (956)
Q Consensus 421 ~e~~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~q 500 (956)
++++++++||||+||||+++|+|+++++|||||||||||||+|+||||||+++++|||++++++++||+||||||+|+||
T Consensus 43 ~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eq 122 (157)
T 2obx_A 43 DRFAVDVFDVPGAYEIPLHARTLAETGRYGAVLGTAFVVNGGIYRHEFVASAVIDGMMNVQLSTGVPVLSAVLTPHNYHD 122 (157)
T ss_dssp TSEEEEEEEESSGGGHHHHHHHHHHHTCCSEEEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEEEEECBSCCCS
T ss_pred CccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEEEecCCCCHHH
Confidence 44579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccC
Q psy2378 501 ANSRILTKG 509 (956)
Q Consensus 501 a~~r~~~~~ 509 (956)
|++|++.++
T Consensus 123 a~eR~~~~~ 131 (157)
T 2obx_A 123 SAEHHRFFF 131 (157)
T ss_dssp CHHHHHHHH
T ss_pred HHHHhhhhc
Confidence 999985443
No 33
>1c41_A Lumazine synthase; riboflavin biosynthesis, transferase; HET: LMZ; 3.10A {Magnaporthe grisea} SCOP: c.16.1.1
Probab=99.94 E-value=5.9e-32 Score=267.23 Aligned_cols=114 Identities=35% Similarity=0.544 Sum_probs=100.5
Q ss_pred ccccccc-----ccCceEEEEcCCcccHHHHHHHHHh------------------------------------ccCCceE
Q psy2378 414 DGTMARA-----QEKNILHISVPGALEIPLALKNIIQ------------------------------------IKKFNVL 452 (956)
Q Consensus 414 ~g~~~~~-----~e~~i~~~~vpg~~e~p~~~~~~~~------------------------------------~~~~d~~ 452 (956)
+|+.+.+ ++.+|.+++|||+||||+++++|++ +++||||
T Consensus 35 ~GA~~~L~~~Gv~~~~I~v~~VPGa~ElP~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DAV 114 (200)
T 1c41_A 35 AGTKAKLLACGVKESNIVVQSVPGSWELPIAVQRLYSASQLQTPSSGPSLSAGDLLGSSTTDLTALPTTTASSTGPFDAL 114 (200)
Confidence 4665544 4457889999999999999999997 5789999
Q ss_pred EEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHHHHHhhhcccCceeEEEeccccchHHHHhccC
Q psy2378 453 IAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQANSRILTKGEIIIFINHKNKSLVNLIKNKT 530 (956)
Q Consensus 453 i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~qa~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (956)
|||||||||+|+||||||++|++|||++++++++||+|||||++|+|||++|++.++. ..|||.+....-+.+..
T Consensus 115 IaLG~VIrGeT~HfeyVa~~vs~GLm~v~L~~~vPVifGVLT~~t~eQA~~RAg~~~k---~~NkG~eaA~aAvem~~ 189 (200)
T 1c41_A 115 IAIGVLIKGETMHFEYIADSVSHGLMRVQLDTGVPVIFGVLTVLTDDQAKARAGVIEG---SHNHGEDWGLAAVEMGV 189 (200)
Confidence 9999999999999999999999999999999999999999999999999999987442 47899998877666543
No 34
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=2.8e-30 Score=318.24 Aligned_cols=239 Identities=11% Similarity=0.067 Sum_probs=189.5
Q ss_pred CccccccCCCceEEccCcCcC--CHHHH---HH-HHHcCCCcEEEeccccccccc---C-C-----chh--------ccc
Q psy2378 2 NMINSKYNKRKISIAPMMNLT--DRHCR---MF-HRQITRYSWLYTEMFTTQAIL---G-N-----KKH--------CLD 58 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~t--d~~fR---~~-~~~~g~~~l~~tem~~~~~l~---~-~-----~~~--------~~~ 58 (956)
.|++.++ +||+++|||++.. +.+.+ +. .++.||+++++||+++.+.-- . . ... ...
T Consensus 14 ~ig~~~l-~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (729)
T 1o94_A 14 QIGPKTL-RNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDE 92 (729)
T ss_dssp EETTEEE-SSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHH
T ss_pred eECCEEE-CCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHH
Confidence 4677788 9999999998753 33432 22 244577899999998775321 1 0 011 123
Q ss_pred cCCCCCCEEEEecCC------------------------C---------------HHHHHHHHHHHHHcCCCEEEecCCC
Q psy2378 59 FNAEEHPIAFQVGDN------------------------E---------------PKKLAKSAKIIQKWGYDEINLNCGC 99 (956)
Q Consensus 59 ~~~~~~p~~vQl~g~------------------------~---------------~~~~~~aA~~~~~~G~d~IeiN~gC 99 (956)
.|..+.++++||++. + +++|++||++++++|||+||||++|
T Consensus 93 vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~ 172 (729)
T 1o94_A 93 VHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAH 172 (729)
T ss_dssp HHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred HHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 588899999999972 1 3799999999999999999999999
Q ss_pred ---------CcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEecc-------CCCCCCcHHHHHHHHHHHHH
Q psy2378 100 ---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI-------GIDDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 100 ---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~-------g~~~~~~~~~~~~~a~~l~~ 161 (956)
|..|.|+|+|||+++||++++.||+++||+++ +.||.+|++. ||+. .++..++++.|++
T Consensus 173 gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~---~~~~~~~~~~l~~ 249 (729)
T 1o94_A 173 SYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA---EVDGQKFVEMADS 249 (729)
T ss_dssp TCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT---TTHHHHHHHHHGG
T ss_pred chHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCc---hHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 7899999986 3331 2357889999998
Q ss_pred cCCCEEEEcccccc-cccCCCCCCCCCC-cCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEcccccc
Q psy2378 162 AGCRTFIVHARNAF-LKKLNPKQNRKIP-ILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYK 237 (956)
Q Consensus 162 ~G~~~i~vh~r~~~-~~g~~~~~~~~~~-~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~ 237 (956)
|+|+|++|.++.. +.+.. ....+.+ ..+|++++++++.+ ++|||+||+|.|+++|+++++. ||+||+||++++
T Consensus 250 -~~d~~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 250 -LVDMWDITIGDIAEWGEDA-GPSRFYQQGHTIPWVKLVKQVS-KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp -GCSEEEEEECCSTTGGGTS-CCTTTCCTTTTHHHHHHHHTTC-SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH
T ss_pred -hcCEEEEeeeccccccccc-CCccccCccccHHHHHHHHHHC-CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc
Confidence 7999999987520 01111 1112222 23689999999988 8999999999999999999987 999999999999
Q ss_pred CCcchHHHHH
Q psy2378 238 NPFLMSNFDL 247 (956)
Q Consensus 238 ~P~l~~~i~~ 247 (956)
||||++++++
T Consensus 327 ~P~~~~~~~~ 336 (729)
T 1o94_A 327 DPFLPQKVEQ 336 (729)
T ss_dssp CTTHHHHHHT
T ss_pred CchHHHHHHc
Confidence 9999999986
No 35
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=3.4e-30 Score=316.10 Aligned_cols=241 Identities=12% Similarity=0.066 Sum_probs=187.1
Q ss_pred CCccccccCCCceEEccCcCcCCHH-------HHHHHHHcCCCcEEEeccccccccc-CC----------------chhc
Q psy2378 1 MNMINSKYNKRKISIAPMMNLTDRH-------CRMFHRQITRYSWLYTEMFTTQAIL-GN----------------KKHC 56 (956)
Q Consensus 1 ~~~~~~~~~~~~i~lAPM~~~td~~-------fR~~~~~~g~~~l~~tem~~~~~l~-~~----------------~~~~ 56 (956)
+.|++.++ +||+++|||++.++.+ |+. .++.||++|++||+++++... +. ++..
T Consensus 18 ~~ig~~~l-~NRiv~apm~~~~~~~~~~~~~~~~~-~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (690)
T 3k30_A 18 VQIGPFTT-KNRFYQVPHCNGMGYRDPSAQASMRK-IKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIA 95 (690)
T ss_dssp CEETTEEC-SSSEEECCCCCSCSSSCHHHHHHHHH-HHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHH
T ss_pred eeECCEEE-CCCeEeCCCcCCCCCCChHHHHHHHH-HHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHH
Confidence 34677888 9999999998754421 222 356677899999998765432 10 1112
Q ss_pred cccCCCCCCEEEEecCC--------------------------C---------------HHHHHHHHHHHHHcCCCEEEe
Q psy2378 57 LDFNAEEHPIAFQVGDN--------------------------E---------------PKKLAKSAKIIQKWGYDEINL 95 (956)
Q Consensus 57 ~~~~~~~~p~~vQl~g~--------------------------~---------------~~~~~~aA~~~~~~G~d~Iei 95 (956)
...|..+.++++||++. . .++|++||++++++|||+|||
T Consensus 96 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 96 DAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 23477899999999941 0 389999999999999999999
Q ss_pred cCCC----------CcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEeccCC--CCCCcHHHHHHHHHHHHH
Q psy2378 96 NCGC----------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGI--DDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 96 N~gC----------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~--~~~~~~~~~~~~a~~l~~ 161 (956)
|++| |..|.|+|+|||+++||++++.||+++||++++ .||.+|+.... +.+.+.++..++++.|++
T Consensus 176 h~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~ 255 (690)
T 3k30_A 176 YGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE 255 (690)
T ss_dssp EECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT
T ss_pred cccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh
Confidence 8774 558999999999999999999999999999995 56666665421 123345678999999998
Q ss_pred cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCC
Q psy2378 162 AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNP 239 (956)
Q Consensus 162 ~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P 239 (956)
|+|+|+||+++. ..... ....+.+...+++++++++.+ ++|||+||+|+++++|+++++. ||+||+||++++||
T Consensus 256 -~~d~~~v~~~~~-~~~~~-~~~~~~~~~~~~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P 331 (690)
T 3k30_A 256 -LPDLWDFAMGSW-EGDSV-TSRFAPEGRQEEFVAGLKKLT-TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADP 331 (690)
T ss_dssp -SSSEEEEECSCH-HHHTC-CTTTCCTTTTHHHHTTSGGGC-SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred -hcCEEEEecccc-cccCC-CCccCCccccHHHHHHHHHHc-CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCc
Confidence 899999998752 11111 111222345678999999988 8999999999999999999987 99999999999999
Q ss_pred cchHHHHH
Q psy2378 240 FLMSNFDL 247 (956)
Q Consensus 240 ~l~~~i~~ 247 (956)
||++++++
T Consensus 332 ~~~~~~~~ 339 (690)
T 3k30_A 332 FLPNKIRD 339 (690)
T ss_dssp THHHHHHT
T ss_pred cHHHHHHc
Confidence 99999986
No 36
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.95 E-value=3.1e-28 Score=270.04 Aligned_cols=234 Identities=16% Similarity=0.070 Sum_probs=187.9
Q ss_pred CccccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCC-c---------------------h----h
Q psy2378 2 NMINSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGN-K---------------------K----H 55 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~-~---------------------~----~ 55 (956)
.+.+.+| +||+++||..--.|..++..+.+.| +++++|++++.+...++ . + +
T Consensus 5 ~i~g~~l-~npv~~Aag~~~~~~~~~~~~~~~G-~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~ 82 (311)
T 1jub_A 5 TFANAKF-ANPFMNASGVHCMTIEDLEELKASQ-AGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDY 82 (311)
T ss_dssp EETTEEE-SSSEEECTTSSCSSHHHHHHHHHSS-CSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHH
T ss_pred EECCEEc-CCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHH
Confidence 4567788 9999999743113889999888887 79999999988875421 1 0 0
Q ss_pred ccccC-CC--CCCEEEEecCCCHHHHHHHHHHHHHcCCC-EEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc
Q psy2378 56 CLDFN-AE--EHPIAFQVGDNEPKKLAKSAKIIQKWGYD-EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV 131 (956)
Q Consensus 56 ~~~~~-~~--~~p~~vQl~g~~~~~~~~aA~~~~~~G~d-~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 131 (956)
+.... +. +.|+++||+|.++++|+++|+++.++|+| +||||++||..+ .|..+..+++.+.++++++|+.+
T Consensus 83 ~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~-----g~~~~g~~~e~~~~iv~~vr~~~ 157 (311)
T 1jub_A 83 VLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-----GEPQLAYDFEATEKLLKEVFTFF 157 (311)
T ss_dssp HHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSS-----SCCCGGGCHHHHHHHHHHHTTTC
T ss_pred HHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCC-----CcccccCCHHHHHHHHHHHHHhc
Confidence 10111 23 78999999999999999999999999999 999999999861 25566678999999999999999
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc------------------ccccCCCCCCCCCCcCcHH
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA------------------FLKKLNPKQNRKIPILKYN 193 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~------------------~~~g~~~~~~~~~~~~~~~ 193 (956)
++||++|++.+++. ++..++++.++++|+|+|++|+++. ..+|++|. ...|..|+
T Consensus 158 ~~Pv~vKi~~~~~~----~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~---~~~~~~~~ 230 (311)
T 1jub_A 158 TKPLGVKLPPYFDL----VHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGA---YIKPTALA 230 (311)
T ss_dssp CSCEEEEECCCCSH----HHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESG---GGHHHHHH
T ss_pred CCCEEEEECCCCCH----HHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccc---cccHHHHH
Confidence 99999999988742 4577899999999999999998751 01122221 11234689
Q ss_pred HHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc-CCcchHHHHHhh
Q psy2378 194 FVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLNY 249 (956)
Q Consensus 194 ~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~-~P~l~~~i~~~~ 249 (956)
.++++++.++ ++|||++|||.|++|+.++++. ||+||+||+++. |||+++++++.+
T Consensus 231 ~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 231 NVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp HHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHH
Confidence 9999999874 7999999999999999999987 999999999996 999999998754
No 37
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.95 E-value=5.5e-29 Score=280.03 Aligned_cols=236 Identities=15% Similarity=0.078 Sum_probs=183.0
Q ss_pred CccccccCCCceEEccCcC--------cCCHHHHHHHH-HcCCCcEEEeccccccccc----C-----C--------chh
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LTDRHCRMFHR-QITRYSWLYTEMFTTQAIL----G-----N--------KKH 55 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~td~~fR~~~~-~~g~~~l~~tem~~~~~l~----~-----~--------~~~ 55 (956)
.|++.++ +|||++|||+. .|+...++..+ +.||++|++||.+....-- + . ++.
T Consensus 19 ~ig~~~L-kNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~~k~l 97 (407)
T 3tjl_A 19 KVGNNTL-QTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWKVI 97 (407)
T ss_dssp EETTEEE-SCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHHHHHH
T ss_pred eECCEEe-cCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHHHHHH
Confidence 3677787 99999999975 36677777654 4467899999976444321 1 0 111
Q ss_pred ccccCCCCCCEEEEecCC----C---------------------------------------------HHH-HHHHHHHH
Q psy2378 56 CLDFNAEEHPIAFQVGDN----E---------------------------------------------PKK-LAKSAKII 85 (956)
Q Consensus 56 ~~~~~~~~~p~~vQl~g~----~---------------------------------------------~~~-~~~aA~~~ 85 (956)
....|..+.++++||+.. . .++ |++||+++
T Consensus 98 ~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~aa~~a 177 (407)
T 3tjl_A 98 TDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTNAAQKA 177 (407)
T ss_dssp HHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 234577899999999731 0 145 99999999
Q ss_pred HHcCCCEEEecCCC---------CcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccCCCC------C-C-
Q psy2378 86 QKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGIDD------I-N- 147 (956)
Q Consensus 86 ~~~G~d~IeiN~gC---------P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~~~------~-~- 147 (956)
+++|||+||||++| |..|.|+|+|||+++||++++.||+++||++++ .||.+|++. |+. . +
T Consensus 178 ~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~-~~~~~g~~~~~d~ 256 (407)
T 3tjl_A 178 MDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISP-WATFQNMKAHKDT 256 (407)
T ss_dssp HHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TCCGGGCCGGGSS
T ss_pred HHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECc-ccccCCCcccccc
Confidence 99999999999999 999999999999999999999999999999996 489999987 221 1 2
Q ss_pred --cHHHHHHHHHHH---HHcC--CCEEEEc-ccccccccCCCCCCCCCCc-CcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 148 --SYDFVRDFVGTV---SSAG--CRTFIVH-ARNAFLKKLNPKQNRKIPI-LKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 148 --~~~~~~~~a~~l---~~~G--~~~i~vh-~r~~~~~g~~~~~~~~~~~-~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
+.++...+++.| ++.| +++|+|| +|+.. + ...++ ..|..+..+++.+ ++|||+||||++.++
T Consensus 257 ~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~-~-------~~~~~~~~~~~~~~ir~~~-~~PvI~~Ggi~~~~d 327 (407)
T 3tjl_A 257 VHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSG-N-------VDVSEEDQAGDNEFVSKIW-KGVILKAGNYSYDAP 327 (407)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEET-T-------EECCGGGCCCCSHHHHHHC-CSEEEEESCGGGGTT
T ss_pred cccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCC-C-------CcCCccchhHHHHHHHHHh-CCCEEecCCCCCHHH
Confidence 245678999999 8889 9999999 55421 0 11111 1345567788887 799999999999887
Q ss_pred HHHHhh----h-cCEEEEccccccCCcchHHHHHh
Q psy2378 219 IDLHLN----Y-IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 219 a~~~l~----~-ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
+.++++ . ||+||+||++++||||+.++++.
T Consensus 328 A~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g 362 (407)
T 3tjl_A 328 EFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDG 362 (407)
T ss_dssp TTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHT
T ss_pred HHHHHHhhccCCCeEEEeChhhhhCchHHHHHHcC
Confidence 665554 4 99999999999999999999874
No 38
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.95 E-value=2.3e-28 Score=275.65 Aligned_cols=231 Identities=16% Similarity=0.154 Sum_probs=183.6
Q ss_pred CccccccCCCceEEccCcC---------cC-CHHHHHHHHHcCCCcEEEeccccccccc-------C-C--------chh
Q psy2378 2 NMINSKYNKRKISIAPMMN---------LT-DRHCRMFHRQITRYSWLYTEMFTTQAIL-------G-N--------KKH 55 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~---------~t-d~~fR~~~~~~g~~~l~~tem~~~~~l~-------~-~--------~~~ 55 (956)
.|++.+. +|||++|||+. .| +....+..++.| ++|++||.+....-- + . ++.
T Consensus 12 ~ig~~~l-~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~-~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~~k~~ 89 (379)
T 3aty_A 12 KLGRYTL-RNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRAS-AGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKI 89 (379)
T ss_dssp EETTEEE-SCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTT-SSEEEEEEEESSTTCCSSSSCCBSSSHHHHHHHHHH
T ss_pred eECCEEE-cCccEECCcCCCcccCCCCccCHHHHHHHHHHHhC-CCeEEECceecccccccCCCCCCcCCHHHHHHHHHH
Confidence 3567787 99999999964 24 666777665555 799999976444221 1 0 111
Q ss_pred ccccCCCCCCEEEEecC---------------------------------------------------------------
Q psy2378 56 CLDFNAEEHPIAFQVGD--------------------------------------------------------------- 72 (956)
Q Consensus 56 ~~~~~~~~~p~~vQl~g--------------------------------------------------------------- 72 (956)
....|..+.++++||+.
T Consensus 90 ~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr~lt~~eI~ 169 (379)
T 3aty_A 90 VDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVR 169 (379)
T ss_dssp HHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCEECCHHHHH
T ss_pred HHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCccCCHHHHh
Confidence 22346677888888741
Q ss_pred -CCHHHHHHHHHHHH-HcCCCEEEecCCC---------Ccceee-eCcccc-cccCChHHHHHHHHHHhhccC-ccEEEE
Q psy2378 73 -NEPKKLAKSAKIIQ-KWGYDEINLNCGC---------PSNRVQ-NGFFGA-ILMTKPLLVSDCIKAMRDSVE-IDITVK 138 (956)
Q Consensus 73 -~~~~~~~~aA~~~~-~~G~d~IeiN~gC---------P~~~~~-~~~~G~-~l~~~~~~~~eiv~~v~~~~~-~pv~vK 138 (956)
..+++|++||++++ ++|||+||||++| |..|.| +|+||| ++++|++++.||+++||++++ .||.||
T Consensus 170 ~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vR 249 (379)
T 3aty_A 170 DGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLR 249 (379)
T ss_dssp HTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEE
Confidence 11356889999999 9999999999986 999999 999999 999999999999999999996 489999
Q ss_pred eccC-C----CCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCC
Q psy2378 139 HRIG-I----DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 213 (956)
Q Consensus 139 ir~g-~----~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI 213 (956)
++.. + .+..+.++..++++.|+++|+|+|++|.++. . + .. ...+ ++++++.+ ++|||+||+|
T Consensus 250 is~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~---~--~~----~~~~-~~~ir~~~-~iPvi~~G~i 316 (379)
T 3aty_A 250 ISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDM--V---N--QQ----IGDV-VAWVRGSY-SGVKISNLRY 316 (379)
T ss_dssp ECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCT--T---S--CC----CCCH-HHHHHTTC-CSCEEEESSC
T ss_pred ECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCc--C---C--CC----ccHH-HHHHHHHC-CCcEEEECCC
Confidence 9983 2 2334556789999999999999999998762 1 1 11 1226 88999988 7999999999
Q ss_pred CCHHHHHHHhhh--cCEEEEccccccCCcchHHHHHh
Q psy2378 214 KTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 214 ~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
++++++++++. ||+||+||++++||||++++++.
T Consensus 317 -t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g 352 (379)
T 3aty_A 317 -DFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQN 352 (379)
T ss_dssp -CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred -CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcC
Confidence 99999999987 99999999999999999999873
No 39
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.95 E-value=8.8e-28 Score=266.79 Aligned_cols=233 Identities=11% Similarity=0.072 Sum_probs=186.8
Q ss_pred ccccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCC----------------------chhc---c
Q psy2378 3 MINSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGN----------------------KKHC---L 57 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~----------------------~~~~---~ 57 (956)
+.+.++ +||+++||+.--.|..++..+.+.| +++++|++++.+...++ ...+ +
T Consensus 8 i~g~~l-~nPi~~Aag~~~~~~~~~~~~~~~G-~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~ 85 (314)
T 2e6f_A 8 LLDHVF-ANPFMNAAGVLCSTEEDLRCMTASS-SGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYA 85 (314)
T ss_dssp ETTEEE-SSSEEECTTSSCSSHHHHHHHHHSS-CSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHH
T ss_pred ECCEec-CCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHH
Confidence 456688 9999999876224678877777877 79999999988864310 1111 1
Q ss_pred cc--CCCCCCEEEEecCCCHHHHHHHHHHHHHcCCC---EEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC
Q psy2378 58 DF--NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYD---EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE 132 (956)
Q Consensus 58 ~~--~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d---~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~ 132 (956)
.. ...+.|+++||+|.++++|.++|+++.++|+| +||||++||..+ .|..+..+++.+.+++++++++++
T Consensus 86 ~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~-----g~~~~g~~~~~~~~ii~~vr~~~~ 160 (314)
T 2e6f_A 86 SDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVP-----GKPQVAYDFEAMRTYLQQVSLAYG 160 (314)
T ss_dssp HHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCST-----TCCCGGGSHHHHHHHHHHHHHHHC
T ss_pred HHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCC-----CchhhcCCHHHHHHHHHHHHHhcC
Confidence 11 22478999999999999999999999999999 999999999862 255666789999999999999999
Q ss_pred ccEEEEeccCCCCCCcHHHHHHHHHHHHHcC-CCEEEEcccccc------------------cccCCCCCCCCCCcCcHH
Q psy2378 133 IDITVKHRIGIDDINSYDFVRDFVGTVSSAG-CRTFIVHARNAF------------------LKKLNPKQNRKIPILKYN 193 (956)
Q Consensus 133 ~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G-~~~i~vh~r~~~------------------~~g~~~~~~~~~~~~~~~ 193 (956)
+||+||++.+++ .++..++++.++++| +|+|++|+++.. .+|++|. ...|..|+
T Consensus 161 ~Pv~vK~~~~~~----~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~---~~~p~~~~ 233 (314)
T 2e6f_A 161 LPFGVKMPPYFD----IAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGK---YILPTALA 233 (314)
T ss_dssp SCEEEEECCCCC----HHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESG---GGHHHHHH
T ss_pred CCEEEEECCCCC----HHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcc---cccHHHHH
Confidence 999999998874 245788999999999 999999987620 0122211 11234689
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc-CCcchHHHHHhh
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLNY 249 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~-~P~l~~~i~~~~ 249 (956)
+++++++.++++|||++|||.|++|+.+++.. ||+||+||+++. |||+++++++++
T Consensus 234 ~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 234 NVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp HHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHHH
Confidence 99999998767999999999999999999987 999999999996 999999998754
No 40
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.95 E-value=2.8e-27 Score=262.88 Aligned_cols=233 Identities=12% Similarity=0.085 Sum_probs=176.8
Q ss_pred ccccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccc---------------c---C----Cch----hc
Q psy2378 3 MINSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAI---------------L---G----NKK----HC 56 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l---------------~---~----~~~----~~ 56 (956)
+...+| +||+++|.=..-.+..+-......| .+.+.+--+..+.- + + ..+ ++
T Consensus 41 ~~Gl~~-~NPv~lAAG~~~~~~e~~~~l~~~G-~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l 118 (354)
T 4ef8_A 41 LLNNTF-ANPFMNAAGVMCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYA 118 (354)
T ss_dssp ETTEEE-SSSEEECTTSSCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHH
T ss_pred ECCEEC-CCCCEeccCCCCCCHHHHHHHHHcC-CCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHH
Confidence 345678 9999988655533444433334444 45554443322211 1 1 001 11
Q ss_pred ccc-CCCCCCEEEEecCCCHHHHHHHHHHHH---HcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC
Q psy2378 57 LDF-NAEEHPIAFQVGDNEPKKLAKSAKIIQ---KWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE 132 (956)
Q Consensus 57 ~~~-~~~~~p~~vQl~g~~~~~~~~aA~~~~---~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~ 132 (956)
... ...+.|+++||+|+++++|+++|+++. ++|+|+||||+|||..+ + |.+|+.+|+.+.+++++|+++++
T Consensus 119 ~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~~e~~~~il~av~~~~~ 193 (354)
T 4ef8_A 119 AEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp HHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGSHHHHHHHHHHHHHHCC
T ss_pred HHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccCHHHHHHHHHHHHHhhC
Confidence 111 123689999999999999999999998 57899999999999864 3 78888999999999999999999
Q ss_pred ccEEEEeccCCCCCCcHHHHHHHHHHHHHcC-CCEEEEc------------cccc------ccccCCCCCCCCCCcCcHH
Q psy2378 133 IDITVKHRIGIDDINSYDFVRDFVGTVSSAG-CRTFIVH------------ARNA------FLKKLNPKQNRKIPILKYN 193 (956)
Q Consensus 133 ~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G-~~~i~vh------------~r~~------~~~g~~~~~~~~~~~~~~~ 193 (956)
+||+||+|++++. +++.++++.++++| +|+|+++ .|+. ...|++|+ ...|.+|+
T Consensus 194 ~PV~vKi~p~~d~----~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~---~i~p~a~~ 266 (354)
T 4ef8_A 194 HSFGVKMPPYFDF----AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGR---YVLPTALA 266 (354)
T ss_dssp SCEEEEECCCCSH----HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGG---GGHHHHHH
T ss_pred CCeEEEecCCCCH----HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCC---CCchHHHH
Confidence 9999999998853 35678888899998 9999864 3321 23444443 34467899
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccC-CcchHHHHHhh
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN-PFLMSNFDLNY 249 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~-P~l~~~i~~~~ 249 (956)
+++++++.++++|||++|||.|++|+.+++.. ||+||+||+++.| ||+++++.+.+
T Consensus 267 ~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l 324 (354)
T 4ef8_A 267 NINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp HHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHH
Confidence 99999998767999999999999999999988 9999999999999 99999998754
No 41
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.94 E-value=2.3e-27 Score=265.76 Aligned_cols=231 Identities=13% Similarity=0.136 Sum_probs=178.9
Q ss_pred ccccccCCCceEEccCcCcCCHH-HHHHHHHcCCCcEEEecccccccccCC-c-----------------------hhc-
Q psy2378 3 MINSKYNKRKISIAPMMNLTDRH-CRMFHRQITRYSWLYTEMFTTQAILGN-K-----------------------KHC- 56 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~~-fR~~~~~~g~~~l~~tem~~~~~l~~~-~-----------------------~~~- 56 (956)
+.+.++ +||+++|++ +++.. ++..+.+.| +++++|++++.+...++ . ..+
T Consensus 49 i~g~~l-~npi~~aag--~~~~~~~~~~~a~~G-~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~ 124 (336)
T 1f76_A 49 CMGLTF-KNPLGLAAG--LDKDGECIDALGAMG-FGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLV 124 (336)
T ss_dssp ETTEEE-SSSEEECTT--SSTTCCCHHHHHHTT-CSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHH
T ss_pred ECCEEc-CCCcEeCcc--cCCcHHHHHHHHHcC-ccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHH
Confidence 456688 999999975 44433 666677776 79999999987643210 0 011
Q ss_pred --cccCCCCCCEEEEecCCC-------HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHH
Q psy2378 57 --LDFNAEEHPIAFQVGDNE-------PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAM 127 (956)
Q Consensus 57 --~~~~~~~~p~~vQl~g~~-------~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v 127 (956)
+.....+.|+++||++++ +++|+++|+++.+ |+|+||||++||.+| |...+++++++.+++++|
T Consensus 125 ~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~v 197 (336)
T 1f76_A 125 ENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTP------GLRTLQYGEALDDLLTAI 197 (336)
T ss_dssp HHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHH
T ss_pred HHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCC------CcccccCHHHHHHHHHHH
Confidence 111123569999999998 9999999999987 999999999999865 345677899999999999
Q ss_pred hhcc---------CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCC-----CCCCCCC----c
Q psy2378 128 RDSV---------EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNP-----KQNRKIP----I 189 (956)
Q Consensus 128 ~~~~---------~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~-----~~~~~~~----~ 189 (956)
|+.+ ++||+||++.+++. +++.++++.++++|+|+|++|+++...+.... ..+.+.+ +
T Consensus 198 r~~~~~~~~~~g~~~Pv~vKi~~~~~~----~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~ 273 (336)
T 1f76_A 198 KNKQNDLQAMHHKYVPIAVKIAPDLSE----EELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQL 273 (336)
T ss_dssp HHHHHHHHHHHTSCCCEEEECCSCCCH----HHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHH
T ss_pred HHHHHhhhhcccccCceEEEecCCCCH----HHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHH
Confidence 9998 89999999987653 45789999999999999999987631111100 0001112 2
Q ss_pred CcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc-CCcchHHHHHh
Q psy2378 190 LKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLN 248 (956)
Q Consensus 190 ~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~-~P~l~~~i~~~ 248 (956)
..++.++++++.++ ++|||++|||.|++|+.++++. ||+||+||+++. ||||++++++.
T Consensus 274 ~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 274 KSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp HHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHHhh
Confidence 34688899998874 6999999999999999999998 999999999998 99999999864
No 42
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.94 E-value=5.2e-27 Score=260.16 Aligned_cols=228 Identities=11% Similarity=0.114 Sum_probs=177.3
Q ss_pred ccccccCCCceEEccCcCc--CCHHHHHHHHHcCCCcEEEecccccccccCC-c-------------------------h
Q psy2378 3 MINSKYNKRKISIAPMMNL--TDRHCRMFHRQITRYSWLYTEMFTTQAILGN-K-------------------------K 54 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~--td~~fR~~~~~~g~~~l~~tem~~~~~l~~~-~-------------------------~ 54 (956)
+...+| +||+++| +|. .+..+...+...| .+.+.+..++.+.-.++ + +
T Consensus 42 ~~Gl~~-~NPv~lA--aG~~~~~~e~~~~~~~~G-~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~ 117 (345)
T 3oix_A 42 IGSFDF-DNCLMNA--AGVYCMTREELAAIDHSE-AGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLD 117 (345)
T ss_dssp ETTEEE-SCSEEEC--TTSSCSSHHHHHHHHTSS-CSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHH
T ss_pred ECCEEC-CCCCEEc--CCCCCCCHHHHHHHHHcC-CCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHH
Confidence 445688 9999999 554 4656666666676 67888887766543210 0 0
Q ss_pred hcccc--CCCCCCEEEEecCCCHHHHHHHHHHHHHcCCC-EEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc
Q psy2378 55 HCLDF--NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYD-EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV 131 (956)
Q Consensus 55 ~~~~~--~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d-~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 131 (956)
++... ...+.|+++||+|.++++|+++|++++++|+| +||||+|||..+ | |.+|+++|+.+.+++++|++.+
T Consensus 118 ~l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G-~~~l~~~~e~l~~il~av~~~~ 192 (345)
T 3oix_A 118 YVTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G-XPQIAYDFETTDQILSEVFTYF 192 (345)
T ss_dssp HHHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T-CCCGGGCHHHHHHHHHHHTTTC
T ss_pred HHHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C-chhhcCCHHHHHHHHHHHHHHh
Confidence 11111 23578999999999999999999999999987 999999999865 3 5888899999999999999999
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEE-------------Ecccccc------cccCCCCCCCCCCcCcH
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFI-------------VHARNAF------LKKLNPKQNRKIPILKY 192 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~-------------vh~r~~~------~~g~~~~~~~~~~~~~~ 192 (956)
++||+||+|++.+ ..++++.++++|++.|+ +|.|+.. .+|++|+ ...|..|
T Consensus 193 ~~PV~vKi~p~~~-------~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~---ai~p~a~ 262 (345)
T 3oix_A 193 TKPLGIKLPPYFD-------IVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGD---YVKPTAL 262 (345)
T ss_dssp CSCEEEEECCCCC-------HHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEG---GGHHHHH
T ss_pred CCCeEEEECCCCC-------HHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCc---cccHHHH
Confidence 9999999999732 35777888887776553 4544421 2344443 2234458
Q ss_pred HHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccc-cccCCcchHHHHHhh
Q psy2378 193 NFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE-AYKNPFLMSNFDLNY 249 (956)
Q Consensus 193 ~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~-~l~~P~l~~~i~~~~ 249 (956)
++++++++.++ ++|||++|||.|++|+.+++.. ||+||+||+ ++.+||++.++++.+
T Consensus 263 ~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L 322 (345)
T 3oix_A 263 ANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKEL 322 (345)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHH
Confidence 99999999885 6999999999999999999988 999999999 899999999998754
No 43
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.94 E-value=6.7e-27 Score=262.71 Aligned_cols=235 Identities=13% Similarity=0.069 Sum_probs=179.7
Q ss_pred CccccccCCCceEEccCcC--------cCCHHHHHHHHHcCCCcEEEecccccccc--c--C----C--------chhcc
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LTDRHCRMFHRQITRYSWLYTEMFTTQAI--L--G----N--------KKHCL 57 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~td~~fR~~~~~~g~~~l~~tem~~~~~l--~--~----~--------~~~~~ 57 (956)
.|++.++ ||||++|||+. +|+...++..++.+ .|+++||.+.+..- . + . ++...
T Consensus 9 ~ig~~~l-kNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 86 (358)
T 4a3u_A 9 RFGAFTA-KNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQ 86 (358)
T ss_dssp EETTEEE-SCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred eECCEEE-CCceEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHHHHHHHHH
Confidence 4678888 99999999964 56777777766655 48999997654432 1 1 0 11123
Q ss_pred ccCCCCCCEEEEecCCC-----------------------------------------------HHHHHHHHHHHHHcCC
Q psy2378 58 DFNAEEHPIAFQVGDNE-----------------------------------------------PKKLAKSAKIIQKWGY 90 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~~-----------------------------------------------~~~~~~aA~~~~~~G~ 90 (956)
..|..+.++++||+... .++|++||++|+++||
T Consensus 87 avh~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGF 166 (358)
T 4a3u_A 87 AVHDAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHALKAGF 166 (358)
T ss_dssp HHHHTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45788999999996311 2679999999999999
Q ss_pred CEEEecCC---------CCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccCC-----CCCCcHHHHHHH
Q psy2378 91 DEINLNCG---------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGI-----DDINSYDFVRDF 155 (956)
Q Consensus 91 d~IeiN~g---------CP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~-----~~~~~~~~~~~~ 155 (956)
|+||||++ ||..|.|+|.|||++.||.+|+.||+++||++++ .+|.||+.... ....+.+....+
T Consensus 167 DgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~ 246 (358)
T 4a3u_A 167 DGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPA 246 (358)
T ss_dssp SEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHH
T ss_pred CeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHH
Confidence 99999987 8999999999999999999999999999999994 46778776521 112233456788
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEcc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGR 233 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR 233 (956)
++.+++.|++.++++.... .+..+ +.....+..++|+.+ +.||+ +|++.+++.|+++|+. ||+|++||
T Consensus 247 ~~~~~~~~~~~i~~~~~~~--~~~~~------~~~~~~~a~~ik~~~-~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR 316 (358)
T 4a3u_A 247 AKMLSDLDIAFLGMREGAV--DGTFG------KTDQPKLSPEIRKVF-KPPLV-LNQDYTFETAQAALDSGVADAISFGR 316 (358)
T ss_dssp HHHHHHHTCSEEEEECCBT--TCSSS------BCSSCCCHHHHHHHC-CSCEE-EESSCCHHHHHHHHHHTSCSEEEESH
T ss_pred HHhhhccCccccccccccc--cCccc------ccccHHHHHHHHHhc-CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhH
Confidence 9999999999999986542 11111 111223456778776 56666 5677899999999997 99999999
Q ss_pred ccccCCcchHHHHHh
Q psy2378 234 EAYKNPFLMSNFDLN 248 (956)
Q Consensus 234 ~~l~~P~l~~~i~~~ 248 (956)
++|+||+|++|+++.
T Consensus 317 ~~ladPdlp~k~~~g 331 (358)
T 4a3u_A 317 PFIGNPDLPRRFFEK 331 (358)
T ss_dssp HHHHCTTHHHHHHHT
T ss_pred HHHhChhHHHHHHhC
Confidence 999999999999973
No 44
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=99.93 E-value=9.4e-28 Score=230.23 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=77.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhccCCceEEEEeEEEeCCcchhHHHHHHHHHHHHHHhhhcCccEEEEecCCCCHHHHHh
Q psy2378 424 NILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQANS 503 (956)
Q Consensus 424 ~i~~~~vpg~~e~p~~~~~~~~~~~~d~~i~lg~vi~g~t~h~~~v~~~~~~~~~~~~~~~~~pv~~gvlt~~~~~qa~~ 503 (956)
.+.++||||+||||+++++|+++++|||||||||| |+|+||||||+++++|||++++++++||+|| |++|.|||++
T Consensus 33 ~i~~~~VPGafEiP~aak~la~~~~yDavIaLG~V--G~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~g--t~~~~eqa~~ 108 (156)
T 2b99_A 33 KIIRKTVPGIKDLPVACKKLLEEEGCDIVMALGMP--GKAEKDKVCAHEASLGLMLAQLMTNKHIIEV--FVHEDEAKDD 108 (156)
T ss_dssp EEEEEEESSGGGHHHHHHHHHHHSCCSEEEEEECC--CSSHHHHHHHHHHHHHHHHHHHHHTCCEEEE--ECCGGGSSSH
T ss_pred eEEEEECCcHHHHHHHHHHHHhcCCCCEEEEeccc--CCcchhHHHHHHHHHHHHHHHhhhCCCEEEE--eCCCHHHHHH
Confidence 36779999999999999999999999999999999 9999999999999999999999999999999 9999999999
Q ss_pred hh-ccc
Q psy2378 504 RI-LTK 508 (956)
Q Consensus 504 r~-~~~ 508 (956)
|+ +.+
T Consensus 109 r~~g~k 114 (156)
T 2b99_A 109 KELDWL 114 (156)
T ss_dssp HHHHHH
T ss_pred Hhhcch
Confidence 99 544
No 45
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.93 E-value=1.1e-25 Score=256.47 Aligned_cols=234 Identities=12% Similarity=0.153 Sum_probs=181.3
Q ss_pred CccccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccC-Cchhccc------------c---------
Q psy2378 2 NMINSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILG-NKKHCLD------------F--------- 59 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~-~~~~~~~------------~--------- 59 (956)
++.+.+| +||+++|++..-....++.+ .+.| ++.+.+++++.+...+ ...++.. +
T Consensus 85 ~i~Gl~~-~NPvglAAG~dk~~~~~~~l-~~~G-fG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~ 161 (443)
T 1tv5_A 85 NIKHLDF-INPFGVAAGFDKNGVCIDSI-LKLG-FSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVT 161 (443)
T ss_dssp EETTEEE-SSSEEECTTTTTTCSSHHHH-HTTT-CSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHH
T ss_pred EECCEEe-CCCcEECCcccCccHHHHHH-HhcC-CCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHHH
Confidence 4567789 99999998876555577774 4455 7999999988765442 1111110 0
Q ss_pred ---C---C--------CCCCEEEEecCCC-----HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHH
Q psy2378 60 ---N---A--------EEHPIAFQVGDNE-----PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLV 120 (956)
Q Consensus 60 ---~---~--------~~~p~~vQl~g~~-----~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~ 120 (956)
+ . ...|+++||++++ +++|+++|+.+.+ ++|+||||++||.++ |..++++++.+
T Consensus 162 ~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~------Glr~lq~~~~l 234 (443)
T 1tv5_A 162 ENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP------GLRDNQEAGKL 234 (443)
T ss_dssp HHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST------TGGGGGSHHHH
T ss_pred HHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCc------ccccccCHHHH
Confidence 0 0 1357999999998 9999999999987 799999999999864 78889999999
Q ss_pred HHHHHHHhhc--------------------------------------------------cCcc-EEEEeccCCCCCCcH
Q psy2378 121 SDCIKAMRDS--------------------------------------------------VEID-ITVKHRIGIDDINSY 149 (956)
Q Consensus 121 ~eiv~~v~~~--------------------------------------------------~~~p-v~vKir~g~~~~~~~ 149 (956)
.+|+++|+++ .++| |+||+++++++
T Consensus 235 ~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~---- 310 (443)
T 1tv5_A 235 KNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQ---- 310 (443)
T ss_dssp HHHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCH----
T ss_pred HHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCH----
Confidence 9999999864 3678 99999998764
Q ss_pred HHHHHHHHHHHHcCCCEEEEccccccccc---CCCCCCCCCC----cCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHH
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKK---LNPKQNRKIP----ILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g---~~~~~~~~~~----~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~ 221 (956)
++..++|+.++++|+|+|++|+++..... +....+.+.+ +..++.++++++.++ ++|||++|||.|++||.+
T Consensus 311 ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e 390 (443)
T 1tv5_A 311 EQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALE 390 (443)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHH
Confidence 35789999999999999999998741100 0001111222 234688999999874 699999999999999999
Q ss_pred Hhhh-cCEEEEcccccc-CCcchHHHHHhh
Q psy2378 222 HLNY-IDGVMLGREAYK-NPFLMSNFDLNY 249 (956)
Q Consensus 222 ~l~~-ad~VmiGR~~l~-~P~l~~~i~~~~ 249 (956)
+++. ||+||+||+++. +||+++++++.+
T Consensus 391 ~l~aGAd~Vqigrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 391 KIEAGASVCQLYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp HHHTTEEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred HHHcCCCEEEEcHHHHhcChHHHHHHHHHH
Confidence 9988 999999999886 999999998754
No 46
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.93 E-value=2.2e-25 Score=249.79 Aligned_cols=173 Identities=14% Similarity=0.149 Sum_probs=146.0
Q ss_pred CCCEEEEecCC-----CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc-------
Q psy2378 63 EHPIAFQVGDN-----EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS------- 130 (956)
Q Consensus 63 ~~p~~vQl~g~-----~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~------- 130 (956)
+.|+++||+|+ ++++|+++++.+.+ ++|+||||+|||..+ |..++++++.+.+++++|+++
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~------G~~~l~~~~~l~~ll~av~~~~~~~~~~ 218 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTA------GLRSLQGKAELRRLLTKVLQERDGLRRV 218 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHTSCGG
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCC------CccccCCHHHHHHHHHHHHHHHhhcccc
Confidence 57999999996 78999999999877 489999999999864 445789999999999999865
Q ss_pred cCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccc------------cccCCCCCCCCCCcCcHHHHHHH
Q psy2378 131 VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF------------LKKLNPKQNRKIPILKYNFVYNL 198 (956)
Q Consensus 131 ~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~------------~~g~~~~~~~~~~~~~~~~i~~v 198 (956)
+++||+||+++++++ +++.++|+.++++|+|+|++|+++.. .+|++|+ ...|..|+.++++
T Consensus 219 ~~~Pv~vKi~p~~~~----~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~---~i~p~a~~~v~~i 291 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTS----QDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGK---PLRDLSTQTIREM 291 (367)
T ss_dssp GCCEEEEEECSCCCH----HHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEG---GGHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCH----HHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCc---ccchhHHHHHHHH
Confidence 689999999998764 45789999999999999999988731 1223322 1223467899999
Q ss_pred HHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccc-cCCcchHHHHHhh
Q psy2378 199 KKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY-KNPFLMSNFDLNY 249 (956)
Q Consensus 199 ~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l-~~P~l~~~i~~~~ 249 (956)
++.++ ++|||++|||.|++|+.++++. ||+||+||+++ .+||++.++.+.+
T Consensus 292 ~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 292 YALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp HHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHH
Confidence 99985 6999999999999999999988 99999999995 6899999998755
No 47
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.92 E-value=1.1e-25 Score=249.69 Aligned_cols=232 Identities=16% Similarity=0.208 Sum_probs=173.5
Q ss_pred ccccccCCCceEEcc-CcCcCCHHHHHHHHHcCCCcEEEecc---------------------ccccccc-CCchhc---
Q psy2378 3 MINSKYNKRKISIAP-MMNLTDRHCRMFHRQITRYSWLYTEM---------------------FTTQAIL-GNKKHC--- 56 (956)
Q Consensus 3 ~~~~~~~~~~i~lAP-M~~~td~~fR~~~~~~g~~~l~~tem---------------------~~~~~l~-~~~~~~--- 56 (956)
+.+.+| +||+++|| |.+.++ .|+..+... +.+.++|+- ++.-++. .....+
T Consensus 11 ~~g~~l-~npi~~aag~~~~~~-~~~~~~~~~-g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~~~ 87 (311)
T 1ep3_A 11 LPGLDL-KNPIIPASGCFGFGE-EYAKYYDLN-KLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTE 87 (311)
T ss_dssp ETTEEE-SSSEEECTTSSTTST-TGGGTSCGG-GSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHHHT
T ss_pred ECCEEC-CCCcEECCCCCCCCH-HHHHHHHhc-CCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHHHH
Confidence 456688 99999999 988776 455443223 345666543 3333332 111111
Q ss_pred -c-ccCC-C-CCCEEEEecCCCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc
Q psy2378 57 -L-DFNA-E-EHPIAFQVGDNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV 131 (956)
Q Consensus 57 -~-~~~~-~-~~p~~vQl~g~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 131 (956)
+ .... . +.|+++||+|++++++.++|+++.+ +|+|+||||++||..+.+ |..+..+++++.++++++++.+
T Consensus 88 ~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g----~~~~g~~~~~~~eii~~v~~~~ 163 (311)
T 1ep3_A 88 KLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG----GQAFGTDPEVAAALVKACKAVS 163 (311)
T ss_dssp HHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT----TEEGGGCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc----hhhhcCCHHHHHHHHHHHHHhc
Confidence 1 1122 3 7899999999999999999999998 999999999999986533 4556679999999999999999
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcc---------cccccccCCCCCCCCCCcCc----HHHHHHH
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHA---------RNAFLKKLNPKQNRKIPILK----YNFVYNL 198 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~---------r~~~~~g~~~~~~~~~~~~~----~~~i~~v 198 (956)
++||.+|++.++++ ..++++.++++|+|+|++.+ ++.... .....+.+.++.. +++++++
T Consensus 164 ~~pv~vk~~~~~~~------~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~-~~~~~~g~~g~~~~~~~~~~i~~i 236 (311)
T 1ep3_A 164 KVPLYVKLSPNVTD------IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPI-LANITGGLSGPAIKPVALKLIHQV 236 (311)
T ss_dssp SSCEEEEECSCSSC------SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBS-STTSCEEEESGGGHHHHHHHHHHH
T ss_pred CCCEEEEECCChHH------HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCcc-ccCCCCcccCccchHHHHHHHHHH
Confidence 99999999987753 35789999999999999954 221000 0000011222333 5888999
Q ss_pred HHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 199 KKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 199 ~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
++.+ ++|||++|||.|++|+.++++. ||+|++||+++.+|++++++++.+
T Consensus 237 ~~~~-~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 237 AQDV-DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp HTTC-SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHHHH
T ss_pred HHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHHHH
Confidence 9887 8999999999999999999987 999999999999999999988654
No 48
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.92 E-value=2.4e-25 Score=253.74 Aligned_cols=241 Identities=11% Similarity=0.067 Sum_probs=170.7
Q ss_pred CccccccCCCceEEccCcC--------cC--CHHHHHHH-HHcCCCcEEEeccccccccc----C----C--------ch
Q psy2378 2 NMINSKYNKRKISIAPMMN--------LT--DRHCRMFH-RQITRYSWLYTEMFTTQAIL----G----N--------KK 54 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~--------~t--d~~fR~~~-~~~g~~~l~~tem~~~~~l~----~----~--------~~ 54 (956)
.|++.++ +|||++|||+. ++ |...++.. |+.||++|++||.+.+..-- + . ++
T Consensus 22 ~ig~l~l-kNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~ 100 (400)
T 4gbu_A 22 KIGNNEL-LHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTK 100 (400)
T ss_dssp EETTEEE-SSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHHHH
T ss_pred eECCEEE-cCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHHHH
Confidence 4677788 99999999964 33 45666654 66688999999986544321 1 1 11
Q ss_pred hccccCCCCCCEEEEecCCC--------------------------------------------------HHHHHHHHHH
Q psy2378 55 HCLDFNAEEHPIAFQVGDNE--------------------------------------------------PKKLAKSAKI 84 (956)
Q Consensus 55 ~~~~~~~~~~p~~vQl~g~~--------------------------------------------------~~~~~~aA~~ 84 (956)
....+|..+.++++||++.. .++|++||++
T Consensus 101 l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~r 180 (400)
T 4gbu_A 101 IFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKN 180 (400)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHHHHHHH
Confidence 12345788999999996321 1579999999
Q ss_pred HHHcCCCEEEecCC---------CCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccC--------CCCC
Q psy2378 85 IQKWGYDEINLNCG---------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIG--------IDDI 146 (956)
Q Consensus 85 ~~~~G~d~IeiN~g---------CP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g--------~~~~ 146 (956)
|+++|||+||||++ +|..|.|+|.|||++.||.||+.||+++||++++ .||.||+... .++.
T Consensus 181 A~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~ 260 (400)
T 4gbu_A 181 SIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAET 260 (400)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGST
T ss_pred HHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchh
Confidence 99999999999986 8999999999999999999999999999999994 5888888652 1122
Q ss_pred CcHHHHHHHHHHHHHcC-----CCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH-
Q psy2378 147 NSYDFVRDFVGTVSSAG-----CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID- 220 (956)
Q Consensus 147 ~~~~~~~~~a~~l~~~G-----~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~- 220 (956)
...++..++++.|+..| .+.+++................+. ......+++.+ ++|||++|++.+..++.
T Consensus 261 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ir~~~-~~pvi~~G~~~~~~~~~~ 335 (400)
T 4gbu_A 261 GIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYE----GGSNDFVYSIW-KGPVIRAGNFALHPEVVR 335 (400)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCC----SCCSTHHHHHC-CSCEEEESSCTTCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhh----hHHHHHHHHHh-CCCEEEeCCCCChHHHHH
Confidence 23445667777777653 445655433210000000011111 11223466666 79999999998766655
Q ss_pred HHhhh-cCEEEEccccccCCcchHHHHHh
Q psy2378 221 LHLNY-IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 221 ~~l~~-ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
.+++. ||+|.+||++|+||+|++|+++.
T Consensus 336 ~~~~~~aDlV~~gR~~iadPdl~~k~~~G 364 (400)
T 4gbu_A 336 EEVKDKRTLIGYGRFFISNPDLVDRLEKG 364 (400)
T ss_dssp HHTTSTTEEEECCHHHHHCTTHHHHHHHT
T ss_pred HHHcCCCeEhHHHHHHHHCcHHHHHHHcC
Confidence 44455 99999999999999999999973
No 49
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.91 E-value=6.5e-24 Score=238.32 Aligned_cols=173 Identities=13% Similarity=0.166 Sum_probs=140.1
Q ss_pred CCCEEEEecCCC-----HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc------
Q psy2378 63 EHPIAFQVGDNE-----PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV------ 131 (956)
Q Consensus 63 ~~p~~vQl~g~~-----~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~------ 131 (956)
..|+++||++++ +++|+++++.+.++ +|.||||+|||.++ |..++++++.+.+++++|+++.
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~ 253 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKN 253 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC------CcccccCHHHHHHHHHHHHHHHHhhccc
Confidence 357899999998 89999999999887 99999999999764 6788999999999999999862
Q ss_pred --------------Ccc-EEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccc----------cccCCCCCCCC
Q psy2378 132 --------------EID-ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF----------LKKLNPKQNRK 186 (956)
Q Consensus 132 --------------~~p-v~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~----------~~g~~~~~~~~ 186 (956)
.+| |+||+++++++ +++.++|+.++++|+|+|++|.++.. .+|++|. .
T Consensus 254 ~~~~~~~~~~~~~~~~P~V~VKi~pd~~~----~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~---a 326 (415)
T 3i65_A 254 NIMNDEFLWFNTTKKKPLVFVKLAPDLNQ----EQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGA---K 326 (415)
T ss_dssp CCSCHHHHCCSSSSSCCEEEEEECSCCCH----HHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEG---G
T ss_pred ccccccccccccCCCCCeEEEEecCCCCH----HHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCc---c
Confidence 689 99999998864 35789999999999999999998741 1222221 1
Q ss_pred CCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccC-CcchHHHHHhh
Q psy2378 187 IPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN-PFLMSNFDLNY 249 (956)
Q Consensus 187 ~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~-P~l~~~i~~~~ 249 (956)
..+..+++++++++.++ +||||++|||.|++||.+++.. ||+||+||+++.+ ||++.++.+++
T Consensus 327 ~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L 392 (415)
T 3i65_A 327 LKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKREL 392 (415)
T ss_dssp GHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHH
Confidence 11234588999999874 5999999999999999999998 9999999999987 99999998754
No 50
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.90 E-value=2.2e-23 Score=265.34 Aligned_cols=236 Identities=13% Similarity=0.163 Sum_probs=179.3
Q ss_pred ccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEeccccccc-ccC-Cchhcc-------------------------
Q psy2378 5 NSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQA-ILG-NKKHCL------------------------- 57 (956)
Q Consensus 5 ~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~-l~~-~~~~~~------------------------- 57 (956)
...| +||+++|||...++.+++..+...| .+.++++.++.+. .++ ...++.
T Consensus 539 G~~~-~nPv~lAa~~~~~~~~~~~~~~~~g-~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~ 616 (1025)
T 1gte_A 539 GLKF-INPFGLASAAPTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEK 616 (1025)
T ss_dssp TEEE-SSSEEECSSGGGSSHHHHHHHHHHT-CSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSS
T ss_pred cccc-cCcccccCCCCCCCHHHHHHHHHCC-cCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccch
Confidence 3467 8999999999999999988887777 5888877665432 111 000000
Q ss_pred ------------ccCCCCCCEEEEe-cCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHH
Q psy2378 58 ------------DFNAEEHPIAFQV-GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCI 124 (956)
Q Consensus 58 ------------~~~~~~~p~~vQl-~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv 124 (956)
.....+.|+++|| +|+++++|.++|++++++|+|+||||++||.. ...+++|++++++++++.+++
T Consensus 617 ~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv 695 (1025)
T 1gte_A 617 TAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNIC 695 (1025)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHH
Confidence 0011257888888 68999999999999999999999999999998 567889999999999999999
Q ss_pred HHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccC------------CC--CCCCCCCcC
Q psy2378 125 KAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKL------------NP--KQNRKIPIL 190 (956)
Q Consensus 125 ~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~------------~~--~~~~~~~~~ 190 (956)
+++++++++||+||++.+.++ +.++++.++++|+|+|+++.++..+.+. .+ ..+.+.+++
T Consensus 696 ~~v~~~~~~Pv~vK~~~~~~~------~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~ 769 (1025)
T 1gte_A 696 RWVRQAVQIPFFAKLTPNVTD------IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTA 769 (1025)
T ss_dssp HHHHHHCSSCEEEEECSCSSC------HHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGG
T ss_pred HHHHHhhCCceEEEeCCChHH------HHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCccc
Confidence 999999999999999986543 5789999999999999994321100000 00 011223344
Q ss_pred cH----HHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc-CCcchHHHHHhh
Q psy2378 191 KY----NFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLNY 249 (956)
Q Consensus 191 ~~----~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~-~P~l~~~i~~~~ 249 (956)
.| +.+.++++.++++|||++|||.|++|+.++++. ||+||+||+++. +|.++.++.+++
T Consensus 770 ~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l 834 (1025)
T 1gte_A 770 IRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGL 834 (1025)
T ss_dssp GHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHH
Confidence 54 789999998878999999999999999999988 999999999997 666888777654
No 51
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.89 E-value=6.8e-23 Score=226.16 Aligned_cols=206 Identities=15% Similarity=0.100 Sum_probs=144.1
Q ss_pred CCCCCcceeeeeeecccccCCcchHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCH-----HHHHHHHHHHHHH
Q psy2378 622 YKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISD-----TGLDYLLKNIKKL 696 (956)
Q Consensus 622 ~~~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~-----~~l~~ll~~i~~~ 696 (956)
.-.+.|+..|.||..+...+. .+.++++.+++|++...+. .++.+.|.|++++.... ..+.++++.+.+.
T Consensus 9 ~is~GC~~~C~fC~~~~~~g~-~r~r~~e~i~~ei~~l~~~----G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~ 83 (304)
T 2qgq_A 9 KISDGCDRGCTFCSIPSFKGS-LRSRSIEDITREVEDLLKE----GKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL 83 (304)
T ss_dssp ESBCCC-------------CC-CCBCCHHHHHHHHHHHHHT----TCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS
T ss_pred EECCCCCCcCccCCccccCCC-ceeeCHHHHHHHHHHHHHC----CCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc
Confidence 345899999999998776553 3456789999999876542 35667777665554422 3577788888764
Q ss_pred cccCCCceeEE-EeCCCCCCHHHHHHHHHcC--CCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHh--cCCeeEEE
Q psy2378 697 LLFKKNISITL-EANPSTFEIEKFHSYSIIG--INRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQ--YFNNFNLD 771 (956)
Q Consensus 697 ~~~~~~~eitl-e~np~~it~e~L~~L~~~G--v~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~--~~~~i~~d 771 (956)
.++ ..+.+ ++||..+++++++.|+++| ++++++|+||+|+++|+.|+|+++.+++.++++.+++ .++.+++|
T Consensus 84 ~gi---~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~ 160 (304)
T 2qgq_A 84 NGE---FWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTS 160 (304)
T ss_dssp SSS---CEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCC---cEEEEeeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 222 23443 5799999999999999999 9999999999999999999999999999999999999 47889999
Q ss_pred EeecCCCCCHHHHHHHHHHHHccCCCeEEEEeeeccCCcccccCCCCCCCCHHHHHHHHHHHHHHH
Q psy2378 772 LIYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLL 837 (956)
Q Consensus 772 lI~GlPgqT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~~~~~~~~~~~~~~~~~~~~~~l 837 (956)
+|+|+||||.++|.++++++.+++++++++|+|+|.||||++++.. ..+.+.+.+.+..+.++.
T Consensus 161 ~IvG~PgEt~ed~~~t~~~l~~l~~~~v~~~~~~p~pgT~~~~~~~--~v~~~~~~~r~~~l~~~~ 224 (304)
T 2qgq_A 161 IIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKE--KVDPEMAKRRQEELLLLQ 224 (304)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-------------CCCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeeCCCCChhHhCcC--CCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998742 244455555555544443
No 52
>3d3b_A Protein NUSB, N utilization substance protein B; NUSB, NUSE, NUT site, phage lambda, lambdan antitermina antitermination; HET: NHE; 1.30A {Escherichia coli} PDB: 3d3c_A 3imq_A 1ey1_A
Probab=99.86 E-value=3.8e-22 Score=193.90 Aligned_cols=131 Identities=36% Similarity=0.551 Sum_probs=121.1
Q ss_pred cCccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHhcccccccHHHHHHHHHHHHHhHHHHHHHHHhhhccCccccCHHHH
Q psy2378 529 KTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYDLSLIIDRSINELSSIEY 608 (956)
Q Consensus 529 ~~~r~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~lD~~i~~~~~~~~~rl~~~~~ 608 (956)
.++|+++|+.|+|+||+++.++.+.+.++..+.....+++.|++|+++||+||++|+..||++|+++++|++++++++++
T Consensus 5 ~~~R~~aR~~A~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~l~~~l~rl~~~~r 84 (141)
T 3d3b_A 5 PAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEK 84 (141)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSCCTTSCHHHHHHHHHHHHHTHHHHHHHHGGGGTTCSSCCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHcCHHHH
Confidence 35689999999999999999888888777776666678889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCcceeeeeeecccccCCcchHHHHHHHHHHHhhh
Q psy2378 609 VVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELS 659 (956)
Q Consensus 609 ~iLr~~~yel~~~~~~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~ 659 (956)
+|||+|+|||+|++++|..+.++|+++++|.++.....+|+|+||+.+.+.
T Consensus 85 ~iLrla~yEll~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~ 135 (141)
T 3d3b_A 85 AVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPV 135 (141)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHCCCCchHHHHHHHHHHHHH
Confidence 999999999999889999999999999999999888999999999998654
No 53
>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A*
Probab=99.85 E-value=5.8e-22 Score=192.86 Aligned_cols=131 Identities=29% Similarity=0.433 Sum_probs=121.0
Q ss_pred cCccHHHHHHHHHHHHHhhcCCC-CHHHHHHHHHHhcccccccHHHHHHHHHHHHHhHHHHHHHHHhhh-ccCccccCHH
Q psy2378 529 KTPRHRAREFALQGIYQWLFNNM-DVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYDLSLII-DRSINELSSI 606 (956)
Q Consensus 529 ~~~r~~~R~~a~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~lD~~i~~~~-~~~~~rl~~~ 606 (956)
+|+|+++|+.|+|+||+++.++. +++.+++.+.. ..+++.|++|+++||+||++|+..||++|++++ +|+++|++++
T Consensus 2 ~~~r~~aR~~A~~~L~~~~~~~~~~~~~~l~~~~~-~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~l~~w~l~rl~~~ 80 (142)
T 1tzv_A 2 KTPRRRMRLAVFKALFQHEFRRDEDLEQILEEILD-ETYDKKAKEDARRYIRGIKENLSMIDDLISRYLEKWSLNRLSVV 80 (142)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHTHHHHHHHHHTTCSSSCGGGSCHH
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHCCHH
Confidence 47899999999999999999998 88888877655 567889999999999999999999999999998 5999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCcceeeeeeecccccCCcchHHHHHHHHHHHhhhc
Q psy2378 607 EYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSL 660 (956)
Q Consensus 607 ~~~iLr~~~yel~~~~~~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~~ 660 (956)
+++|||+|+|||+|++++|..+.++++++++|.++.....+|+|+||+.+.+..
T Consensus 81 ~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVL~~i~r~~ 134 (142)
T 1tzv_A 81 DRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEH 134 (142)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHh
Confidence 999999999999998899999999999999999998889999999999987543
No 54
>3r2d_A Protein NUSB, N utilization substance protein B; cross species NUSB-NUSE-RNA interaction; 2.20A {Aquifex aeolicus} PDB: 2jr0_A 3r2c_A* 4eya_A
Probab=99.85 E-value=8.6e-22 Score=192.58 Aligned_cols=132 Identities=18% Similarity=0.211 Sum_probs=121.2
Q ss_pred cCccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHhcc-cccccHHHHHHHHHHHHHhHHHHHHHHHhhh-ccCccccCHH
Q psy2378 529 KTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEISN-FYKVDKKYFYLILRGVINDINFLRYDLSLII-DRSINELSSI 606 (956)
Q Consensus 529 ~~~r~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~lv~gv~~~~~~lD~~i~~~~-~~~~~rl~~~ 606 (956)
|.+|+++|+.|+|+||+++.++.+++++++.+..... ++++|++|+++||+||++|+..||++|++++ +|+++|++++
T Consensus 2 m~~R~~aR~~A~q~L~~~~~~~~~~~~~l~~~~~~~~~~~~~dr~~~~~lv~gvl~~~~~lD~~i~~~l~~w~~~rl~~~ 81 (149)
T 3r2d_A 2 MRYRKGARDTAFLVLYRWDLRGENPGELFKEVVEEKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEKHLKGWSIDRLGYV 81 (149)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTHHHHHHHHHTTC---CGGGSCHH
T ss_pred CccHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccccCHH
Confidence 4578999999999999999999999999888776655 7889999999999999999999999999998 5999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCcceeeeeeecccccCCcchHHHHHHHHHHHhhhc
Q psy2378 607 EYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSL 660 (956)
Q Consensus 607 ~~~iLr~~~yel~~~~~~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~~ 660 (956)
+++|||+|+|||+|++++|..+.++++++++|.++.....+|+|+||+.+.+..
T Consensus 82 ~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~ 135 (149)
T 3r2d_A 82 ERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAY 135 (149)
T ss_dssp HHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCCCeehHHHHHHHHHHhCCCCccccchHHhhHHHHhh
Confidence 999999999999998899999999999999999998889999999999987643
No 55
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.84 E-value=7.7e-21 Score=213.64 Aligned_cols=211 Identities=15% Similarity=0.140 Sum_probs=164.2
Q ss_pred cccccCCCceEEccCc--CcC----CHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecC-CCHH
Q psy2378 4 INSKYNKRKISIAPMM--NLT----DRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGD-NEPK 76 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~--~~t----d~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g-~~~~ 76 (956)
.+..+ +.|+++|||+ +++ +.++++.|+++| ..+++++|.+ ..+. .... ...+.|+.+||++ +|++
T Consensus 75 ~G~~l-~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G-~~~~~s~~~s-~~le----~v~~-~~~~~~~~~QLy~~~d~~ 146 (368)
T 2nli_A 75 LGHKI-KAPFIMAPIAAHGLAHTTKEAGTARAVSEFG-TIMSISAYSG-ATFE----EISE-GLNGGPRWFQIYMAKDDQ 146 (368)
T ss_dssp TTEEE-SSSEEECCCSCGGGTCTTHHHHHHHHHHHHT-CCEEECTTCS-SCHH----HHHH-HHTTCCEEEEECCBSSHH
T ss_pred CCEec-CCceeecchhhccCCCcHHHHHHHHHHHHcC-CCEEeechHh-HHHH----HHHH-hCCCCCEEEEEeccCCHH
Confidence 34566 8899999999 877 479999999999 5799999886 3331 1111 1136889999998 8999
Q ss_pred HHHHHHHHHHHcCCCEEEecCCCCcce------------------ee----eCcccccc---c--CChHHHHHHHHHHhh
Q psy2378 77 KLAKSAKIIQKWGYDEINLNCGCPSNR------------------VQ----NGFFGAIL---M--TKPLLVSDCIKAMRD 129 (956)
Q Consensus 77 ~~~~aA~~~~~~G~d~IeiN~gCP~~~------------------~~----~~~~G~~l---~--~~~~~~~eiv~~v~~ 129 (956)
...+++++++++|+++|+||++||... .. ..+.|+.+ + .|+++..++++++++
T Consensus 147 ~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~ 226 (368)
T 2nli_A 147 QNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAG 226 (368)
T ss_dssp HHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHH
Confidence 999999999999999999999999831 11 03456665 3 378888999999999
Q ss_pred ccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEE
Q psy2378 130 SVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEII 208 (956)
Q Consensus 130 ~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi 208 (956)
.+++||.||.-. ..+.++.++++|+|+|+|+++.+ .+...++..|+.+.++++.++ ++|||
T Consensus 227 ~~~~PvivK~v~----------~~e~a~~a~~~Gad~I~vs~~gg--------r~~~~g~~~~~~l~~v~~~v~~~ipVi 288 (368)
T 2nli_A 227 HSGLPVFVKGIQ----------HPEDADMAIKRGASGIWVSNHGA--------RQLYEAPGSFDTLPAIAERVNKRVPIV 288 (368)
T ss_dssp HSSSCEEEEEEC----------SHHHHHHHHHTTCSEEEECCGGG--------TSCSSCCCHHHHHHHHHHHHTTSSCEE
T ss_pred HcCCCEEEEcCC----------CHHHHHHHHHcCCCEEEEcCCCc--------CCCCCCCChHHHHHHHHHHhCCCCeEE
Confidence 999999999421 24678999999999999965431 112334678999999998775 59999
Q ss_pred EecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 209 INGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 209 ~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
++|||.+++|+.+++.. ||+||||| ||++...
T Consensus 289 a~GGI~~g~D~~kalalGAd~V~iGr-----~~l~~~~ 321 (368)
T 2nli_A 289 FDSGVRRGEHVAKALASGADVVALGR-----PVLFGLA 321 (368)
T ss_dssp ECSSCCSHHHHHHHHHTTCSEEEECH-----HHHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEECH-----HHHHHHH
Confidence 99999999999999998 99999999 5555544
No 56
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.82 E-value=5e-20 Score=208.99 Aligned_cols=223 Identities=9% Similarity=0.001 Sum_probs=178.3
Q ss_pred CCCCcceeeeeeecccccCC---cchHHHHHHHHHHHhhhcccccccceeEEEecCCC--CCCCCHHHHHHHHHHHHHHc
Q psy2378 623 KIPYKVIINEAIELVKSFGN---IDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGT--PSLISDTGLDYLLKNIKKLL 697 (956)
Q Consensus 623 ~~P~c~~~Ce~C~l~k~~~~---~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggt--Ps~L~~~~l~~ll~~i~~~~ 697 (956)
..++|+..|.||...+.+.. .......+.++++++...+ ..+++++|+||+ |+.+..+++.++++.+++.
T Consensus 72 ~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~----~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~- 146 (369)
T 1r30_A 72 KTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKA----AGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM- 146 (369)
T ss_dssp ECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHH----TTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT-
T ss_pred ECCCCcccCccCCCCCcCCCCCcccccCCHHHHHHHHHHHHH----cCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc-
Confidence 47999999999998764321 1111235666666654432 246789998876 7778888899999988874
Q ss_pred ccCCCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCeeEEEEeecCC
Q psy2378 698 LFKKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIYALP 777 (956)
Q Consensus 698 ~~~~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~~~~~i~~dlI~GlP 777 (956)
..+++ +++..++++.++.|+++|++++++|+|| +++.++.++|.++.+++.++++.+++.|+.+++++|+|+
T Consensus 147 ----g~~i~--~t~G~l~~e~l~~L~~aGvd~v~i~les-~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl- 218 (369)
T 1r30_A 147 ----GLEAC--MTLGTLSESQAQRLANAGLDYYNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL- 218 (369)
T ss_dssp ----TSEEE--EECSSCCHHHHHHHHHHCCCEEECCCBS-CHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS-
T ss_pred ----CCeEE--EecCCCCHHHHHHHHHCCCCEEeecCcC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeC-
Confidence 23555 5788899999999999999999999999 999999999999999999999999999889999999999
Q ss_pred CCCHHHHHHHHHHHHccC--CCeEEEEeeeccCCcccccCCCCCCCCHHHHHHHHHHHHHHHHhcCchhHHHHhhcCCCC
Q psy2378 778 NQTLSELMLDLNYAIQYS--PPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLLKNNYYKNYEISAYSKTGY 855 (956)
Q Consensus 778 gqT~e~~~~tl~~~~~l~--~~~i~~y~l~~~pgT~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~yeis~far~g~ 855 (956)
|||.+++.++++++.+++ |++++++.|+|.|||++++. +.++.++..+++..++..|...+
T Consensus 219 ~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~---~~~~~~~~~~~~~~~r~~l~~~~-------------- 281 (369)
T 1r30_A 219 GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADN---DDVDAFDFIRTIAVARIMMPTSY-------------- 281 (369)
T ss_dssp SCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSC---CCCCHHHHHHHHHHHHHHCTTSE--------------
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCC---CCCCHHHHHHHHHHHHHhCCCCc--------------
Confidence 999999999999999998 89999999999999999864 35677777778877777665432
Q ss_pred cccchhccccC----Cceeeccccch
Q psy2378 856 ESQHNLNYWKF----GDYLGNSIAKS 877 (956)
Q Consensus 856 ~s~hn~~yw~~----~~ylg~g~~~~ 877 (956)
.|++.||.. ..|+|++.|+.
T Consensus 282 --i~i~~~~~~l~~~~~~~~l~~Gan 305 (369)
T 1r30_A 282 --VRLSAGREQMNEQTQAMCFMAGAN 305 (369)
T ss_dssp --EEEESSGGGSCHHHHHHHHHHTCC
T ss_pred --eEeecchhhcChHHHHHHhhCCCc
Confidence 345556654 46777766654
No 57
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.82 E-value=4.6e-20 Score=207.39 Aligned_cols=213 Identities=13% Similarity=0.161 Sum_probs=152.2
Q ss_pred cccccCCCceEEccCcCcC-------CHHHHHHHHHcCCCcEEEecccccccccC-C---chhccccCCCCCCEEEEec-
Q psy2378 4 INSKYNKRKISIAPMMNLT-------DRHCRMFHRQITRYSWLYTEMFTTQAILG-N---KKHCLDFNAEEHPIAFQVG- 71 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~~t-------d~~fR~~~~~~g~~~l~~tem~~~~~l~~-~---~~~~~~~~~~~~p~~vQl~- 71 (956)
.+..| ++|+++|||++++ +.+++..|.++| +.+++++|.+. +.. . ..+++.....+.|+++|+.
T Consensus 50 ~g~~~-~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G-~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~pv~~~i~~ 125 (349)
T 1p0k_A 50 GELSS-SSPIFINAMTGGGGKLTYEINKSLARAASQAG-IPLAVGSQMSA--LKDPSERLSYEIVRKENPNGLIFANLGS 125 (349)
T ss_dssp TTEEE-SCSEEEECCCCSCHHHHHHHHHHHHHHHHHHT-CCEECCCCTTT--TTCHHHHHHHHHHHHHCSSSCEEEEEET
T ss_pred CCccc-CCceEEcCccccchhhhhHHHHHHHHHHHHcC-CcEEeccchhc--ccCcccccceehhhhhCCCceeEEeecC
Confidence 34567 8999999999999 889999999998 57889998764 211 0 1112222345789999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHH--HHHHHHHHhhccCccEEEEec-cCCCCCCc
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLL--VSDCIKAMRDSVEIDITVKHR-IGIDDINS 148 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~--~~eiv~~v~~~~~~pv~vKir-~g~~~~~~ 148 (956)
|.+++.+.++ ++.+|+|+|+||++||...... .| ++++ +.++++++++.+++||.+|+. .+++
T Consensus 126 ~~~~~~~~~~---~~~~gad~i~i~~~~~~~~~~~--~~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~---- 191 (349)
T 1p0k_A 126 EATAAQAKEA---VEMIGANALQIHLNVIQEIVMP--EG-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS---- 191 (349)
T ss_dssp TCCHHHHHHH---HHHTTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC----
T ss_pred CCCHHHHHHH---HHhcCCCeEEecccchhhhcCC--CC-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC----
Confidence 8899877654 5568999999999999753322 11 4444 789999999999999999984 4332
Q ss_pred HHHHHHHHHHHHHcCCCEEEE--cccccccccCCCCCC------CCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIV--HARNAFLKKLNPKQN------RKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~v--h~r~~~~~g~~~~~~------~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+.++.++++|+|+|++ |+++.+..--..... ...++..++.+.++++.++++|||++|||.+++|+.
T Consensus 192 ----~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~ 267 (349)
T 1p0k_A 192 ----KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVA 267 (349)
T ss_dssp ----HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHH
T ss_pred ----HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHH
Confidence 35688999999999999 666421100000000 123456788999998877679999999999999999
Q ss_pred HHhhh-cCEEEEccccccC
Q psy2378 221 LHLNY-IDGVMLGREAYKN 238 (956)
Q Consensus 221 ~~l~~-ad~VmiGR~~l~~ 238 (956)
+++.. ||+|++||+++..
T Consensus 268 k~l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 268 KAIALGASCTGMAGHFLKA 286 (349)
T ss_dssp HHHHTTCSEEEECHHHHHH
T ss_pred HHHHcCCCEEEEcHHHHHH
Confidence 99988 9999999976654
No 58
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.80 E-value=1.6e-19 Score=204.26 Aligned_cols=206 Identities=14% Similarity=0.164 Sum_probs=157.6
Q ss_pred cccccCCCceEEccCcCcCCHH-------HHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecC-CCH
Q psy2378 4 INSKYNKRKISIAPMMNLTDRH-------CRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGD-NEP 75 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~~td~~-------fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g-~~~ 75 (956)
.+..+ +.|+++||| ++++.. +++.|+++| ..+++++|.+ ..+ ++... ...+.|+.+||++ .|+
T Consensus 89 ~G~~l-~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G-~~~~~s~~~s-~~l----e~v~~-~~~~~~~~~QLy~~~d~ 159 (392)
T 2nzl_A 89 LGQRV-SMPICVGAT-AMQRMAHVDGELATVRACQSLG-TGMMLSSWAT-SSI----EEVAE-AGPEALRWLQLYIYKDR 159 (392)
T ss_dssp TTEEE-SSSEEECCC-SCGGGTSTTHHHHHHHHHHHHT-CEEEECTTCS-SCH----HHHHH-HCTTSEEEEEECCBSSH
T ss_pred CCEec-CCceEeccc-cccccccchHHHHHHHHHHHcC-CCeeccchHH-HHH----HHHHH-hcCCCcEEEEEEecCCH
Confidence 34456 889999999 777775 999999999 5799999876 222 11111 2236799999987 799
Q ss_pred HHHHHHHHHHHHcCCCEEEecCCCCcc---------------ee-----e------eC----cccc---cccC---ChHH
Q psy2378 76 KKLAKSAKIIQKWGYDEINLNCGCPSN---------------RV-----Q------NG----FFGA---ILMT---KPLL 119 (956)
Q Consensus 76 ~~~~~aA~~~~~~G~d~IeiN~gCP~~---------------~~-----~------~~----~~G~---~l~~---~~~~ 119 (956)
+...+.+++++++|+++|+||++||.. ++ . .. +.|+ +++. +|++
T Consensus 160 ~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~ 239 (392)
T 2nzl_A 160 EVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSI 239 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHH
Confidence 999999999999999999999999985 22 1 00 1222 2444 8888
Q ss_pred HHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHH
Q psy2378 120 VSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 199 (956)
Q Consensus 120 ~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~ 199 (956)
..++++++++.+++||.||.- . ..+.|+.++++|+|+|+|+++.+ .+...++..|+.+.+++
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv---~-------~~e~A~~a~~aGad~I~vs~~gg--------r~~~~g~~~~~~l~~v~ 301 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGI---L-------RGDDAREAVKHGLNGILVSNHGA--------RQLDGVPATIDVLPEIV 301 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEE---C-------CHHHHHHHHHTTCCEEEECCGGG--------TSSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEec---C-------CHHHHHHHHHcCCCEEEeCCCCC--------CcCCCCcChHHHHHHHH
Confidence 889999999999999999942 1 13568999999999999976542 12233467899999999
Q ss_pred HhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 200 KDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 200 ~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
+.+. ++|||++|||.+++|+.++|.. ||+||+||+++
T Consensus 302 ~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l 340 (392)
T 2nzl_A 302 EAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIV 340 (392)
T ss_dssp HHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHH
Confidence 8764 5999999999999999999998 99999999444
No 59
>1eyv_A NUSB protein, N-utilizing substance protein B homolog; helical bundle, structural genomics, PSI, protein structure initiative; 1.60A {Mycobacterium tuberculosis} SCOP: a.79.1.1
Probab=99.80 E-value=3.9e-20 Score=182.29 Aligned_cols=131 Identities=18% Similarity=0.271 Sum_probs=113.1
Q ss_pred cCccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHh---cccccccHHHHHHHHHHHHHhHHHHHHHHHhhh-ccCccccC
Q psy2378 529 KTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEI---SNFYKVDKKYFYLILRGVINDINFLRYDLSLII-DRSINELS 604 (956)
Q Consensus 529 ~~~r~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~lv~gv~~~~~~lD~~i~~~~-~~~~~rl~ 604 (956)
+++|+++|+.|+|+||+++.++.+.+.++...... ....+.+++|+++||+||++|+..||++|++++ +|+++|++
T Consensus 7 ~~~R~~aR~~Alq~L~~~~~~~~~~~~~l~~~~~l~~~d~~~~~~~~~~~~lv~gvl~~~~~lD~~i~~~l~~w~l~rl~ 86 (156)
T 1eyv_A 7 VRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLP 86 (156)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHTHHHHHHHHHTTSTTCCGGGSC
T ss_pred ccchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCChhhCC
Confidence 56899999999999999999888887766544321 112345589999999999999999999999998 59999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCcceeeeeeecccccCCcchHHHHHHHHHHHhhh
Q psy2378 605 SIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELS 659 (956)
Q Consensus 605 ~~~~~iLr~~~yel~~~~~~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~ 659 (956)
+++++|||+|+|||+|++++|..+.++++++++|.++.....+|+|+||+.+.+.
T Consensus 87 ~~~r~iLrla~yel~~~~~iP~~v~InEaVelak~~~~~~~~~fVNgVLr~i~r~ 141 (156)
T 1eyv_A 87 AVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLV 141 (156)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHhCCCccccchHHHHHHHHHh
Confidence 9999999999999999889999999999999999999888899999999998654
No 60
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.80 E-value=6.6e-19 Score=198.75 Aligned_cols=205 Identities=15% Similarity=0.147 Sum_probs=158.5
Q ss_pred cccccCCCceEEccCcCcCCHH-------HHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEec-CCCH
Q psy2378 4 INSKYNKRKISIAPMMNLTDRH-------CRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVG-DNEP 75 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~~td~~-------fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~-g~~~ 75 (956)
.+..+ +.|+++||| ++++.+ |++.|+++| ..+++++|.+.. + +++....+ .|..+||+ ++++
T Consensus 66 ~G~~~-~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G-~~~~~s~~~~~~-i----eev~~~~~--~~~~~QLy~~~d~ 135 (370)
T 1gox_A 66 LGFKI-SMPIMIAPT-AMQKMAHPEGEYATARAASAAG-TIMTLSSWATSS-V----EEVASTGP--GIRFFQLYVYKDR 135 (370)
T ss_dssp TTEEE-SSSEEECCC-SCGGGTCTTHHHHHHHHHHHTT-CCEEECTTCSSC-H----HHHHTTCC--CCEEEEECCBSSH
T ss_pred CCccc-CCceeEccc-chhhhccchHHHHHHHHHHHcC-CCeeccCCCCCC-H----HHHHhhcC--CCceEEEecCCCc
Confidence 34466 789999999 888887 999999999 579999987542 1 22222222 78999996 8999
Q ss_pred HHHHHHHHHHHHcCCCEEEecCCCCcc---------------e-----eee-------Ccccccc------cCChHHHHH
Q psy2378 76 KKLAKSAKIIQKWGYDEINLNCGCPSN---------------R-----VQN-------GFFGAIL------MTKPLLVSD 122 (956)
Q Consensus 76 ~~~~~aA~~~~~~G~d~IeiN~gCP~~---------------~-----~~~-------~~~G~~l------~~~~~~~~e 122 (956)
+...+.+++++++|+++|+||++||.. . ... ...|+.+ +.+|++..+
T Consensus 136 ~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~ 215 (370)
T 1gox_A 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWK 215 (370)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHH
T ss_pred hHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHH
Confidence 999999999999999999999999975 1 111 2345554 557777778
Q ss_pred HHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC
Q psy2378 123 CIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 202 (956)
Q Consensus 123 iv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~ 202 (956)
.++++++.+++||.+|.... .+.++.+.++|+|+|+|++... + +....+..|+.+.++++.+
T Consensus 216 ~i~~l~~~~~~pv~vK~~~~----------~e~a~~a~~~Gad~I~vs~~gg-------r-~~~~~~~~~~~l~~v~~~~ 277 (370)
T 1gox_A 216 DVAWLQTITSLPILVKGVIT----------AEDARLAVQHGAAGIIVSNHGA-------R-QLDYVPATIMALEEVVKAA 277 (370)
T ss_dssp HHHHHHHHCCSCEEEECCCS----------HHHHHHHHHTTCSEEEECCGGG-------T-SSTTCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEecCC----------HHHHHHHHHcCCCEEEECCCCC-------c-cCCCcccHHHHHHHHHHHh
Confidence 89999999999999998742 3568899999999999943211 0 1122356899999999987
Q ss_pred C-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 203 P-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 203 ~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
+ ++|||++|||.+++|+.++++. ||+||+||+++
T Consensus 278 ~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l 313 (370)
T 1gox_A 278 QGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVV 313 (370)
T ss_dssp TTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHH
Confidence 5 6999999999999999999988 99999999665
No 61
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.80 E-value=5.5e-19 Score=198.85 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=129.2
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHc---CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKW---GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK 138 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~---G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK 138 (956)
.+.|+++||.|.+++++++.++.+.++ ++|.||||++||..+ .|..+..+++.+.++++++++.+..|+.+|
T Consensus 125 ~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK 199 (354)
T 3tjx_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEVYPHSFGVK 199 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHHhhcccccc
Confidence 468999999999999999988877653 789999999999753 367788899999999999999999999999
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcC-CCEEEEc----------cccc--------ccccCCCCCCCCCCcCcHHHHHHHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAG-CRTFIVH----------ARNA--------FLKKLNPKQNRKIPILKYNFVYNLK 199 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G-~~~i~vh----------~r~~--------~~~g~~~~~~~~~~~~~~~~i~~v~ 199 (956)
+++++++.. ....+..+.+.+ ++.++.- .++. ..+|+||++ ..+..++++++++
T Consensus 200 ~~p~~~~~~----~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~---~~~~a~~~v~~~~ 272 (354)
T 3tjx_A 200 MPPYFDFAA----FDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRY---VLPTALANINAFY 272 (354)
T ss_dssp ECCCCSHHH----HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGG---GHHHHHHHHHHHH
T ss_pred cCCCCCchh----HHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchh---hHHHHHHHHHHHH
Confidence 999886532 334555565544 4444321 1111 123344431 1122346677888
Q ss_pred HhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcccc-ccCCcchHHHHHhh
Q psy2378 200 KDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREA-YKNPFLMSNFDLNY 249 (956)
Q Consensus 200 ~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~-l~~P~l~~~i~~~~ 249 (956)
+..+++|||++|||.|++||.+++.. ||+||||+++ +.+||++.+|++++
T Consensus 273 ~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L 324 (354)
T 3tjx_A 273 RRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp HHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred HhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHH
Confidence 88778999999999999999999988 9999999997 47999999998755
No 62
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.76 E-value=5.8e-18 Score=197.62 Aligned_cols=206 Identities=13% Similarity=0.163 Sum_probs=156.7
Q ss_pred ccccCCCceEEccCcC---c----CCHHHHHHHHH--cCCCcEEEeccccc-ccccCCchhccccC-CCCCCEEEEec-C
Q psy2378 5 NSKYNKRKISIAPMMN---L----TDRHCRMFHRQ--ITRYSWLYTEMFTT-QAILGNKKHCLDFN-AEEHPIAFQVG-D 72 (956)
Q Consensus 5 ~~~~~~~~i~lAPM~~---~----td~~fR~~~~~--~g~~~l~~tem~~~-~~l~~~~~~~~~~~-~~~~p~~vQl~-g 72 (956)
+..+ +.|+++|||++ . ++.++++.|++ +| +.++++||.+. -+. +.... +.+.|..+||+ +
T Consensus 185 G~~l-~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G-~~~~~s~~a~~s~e~------v~~~~~~~~~~~~~QLy~~ 256 (511)
T 1kbi_A 185 GSHV-DVPFYVSATALCKLGNPLEGEKDVARGCGQGVTK-VPQMISTLASCSPEE------IIEAAPSDKQIQWYQLYVN 256 (511)
T ss_dssp TEEE-SSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSC-CCEEECTTCSSCHHH------HHHTCCCSSCCEEEEECCC
T ss_pred CccC-CCCeEeccchhccccChhhHHHHHHHHHHHhCCC-eeEEeCCcccCCHHH------HHhhcCCCCCCeEEEEeec
Confidence 4466 88999999997 4 47899999999 98 57999998432 221 11122 34578999998 9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcc----------------eeee------Ccccc--ccc---CChHHHHHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSN----------------RVQN------GFFGA--ILM---TKPLLVSDCIK 125 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~----------------~~~~------~~~G~--~l~---~~~~~~~eiv~ 125 (956)
.|++.+.+++++++++||++|.|++.||+. ++.. +.+++ .++ .||++..++++
T Consensus 257 ~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~ 336 (511)
T 1kbi_A 257 SDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIE 336 (511)
T ss_dssp SSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHH
Confidence 999999999999999999999999999971 1111 11121 233 57888889999
Q ss_pred HHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC---
Q psy2378 126 AMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF--- 202 (956)
Q Consensus 126 ~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~--- 202 (956)
++|+.+++||.||. +.. .+.|+.++++|+|+|+|+++.+ .+....+..|+.+.++++.+
T Consensus 337 ~lr~~~~~PvivKg---v~~-------~e~A~~a~~aGad~I~vs~hgG--------~~~d~~~~~~~~l~~v~~~v~~~ 398 (511)
T 1kbi_A 337 ELKKKTKLPIVIKG---VQR-------TEDVIKAAEIGVSGVVLSNHGG--------RQLDFSRAPIEVLAETMPILEQR 398 (511)
T ss_dssp HHHHHCSSCEEEEE---ECS-------HHHHHHHHHTTCSEEEECCTTT--------TSSTTCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCcEEEEe---CCC-------HHHHHHHHHcCCCEEEEcCCCC--------ccCCCCCchHHHHHHHHHHHHhh
Confidence 99999999999993 221 3568999999999999954321 01122345788898888875
Q ss_pred ---CCceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 203 ---PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 203 ---~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
.++|||++|||.+++|+.++|.. ||+|||||+++
T Consensus 399 ~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l 436 (511)
T 1kbi_A 399 NLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFL 436 (511)
T ss_dssp TCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred ccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 36999999999999999999998 99999999443
No 63
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.75 E-value=8.3e-18 Score=189.43 Aligned_cols=202 Identities=11% Similarity=0.050 Sum_probs=159.6
Q ss_pred CCCcceeeeeeecccccCCcchHHHHHHHHHHHhhhcccccccceeEEEecCCC-CCCC-CHHHHHHHHHHHHHHcccCC
Q psy2378 624 IPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGT-PSLI-SDTGLDYLLKNIKKLLLFKK 701 (956)
Q Consensus 624 ~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggt-Ps~L-~~~~l~~ll~~i~~~~~~~~ 701 (956)
...|+..|.||.+.+..+........+.++++++...+ ..+..+.|.||. |.+. +.+++.++++.+++.++
T Consensus 68 t~~C~~~C~fC~~~~~~~~~~~~ls~eei~~~~~~~~~----~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~--- 140 (350)
T 3t7v_A 68 STYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKG----AGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELG--- 140 (350)
T ss_dssp ECCCCCCCTTCTTCTTSCCCCCBCCHHHHHHHHHHHTT----SCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHC---
T ss_pred CCCcCCCCCcCCCcCcCCCCceeCCHHHHHHHHHHHHH----CCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcC---
Confidence 46899999999876544211111346777777765433 346778776665 7653 45677888888887643
Q ss_pred CceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCeeEEEEeecCCCCCH
Q psy2378 702 NISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIYALPNQTL 781 (956)
Q Consensus 702 ~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~~~~~i~~dlI~GlPgqT~ 781 (956)
+.+.+++..+++|.++.|+++|++++++|+||+++++++.++++++.++..++++.+++.|+.+++++|+|+ |||.
T Consensus 141 ---i~i~~s~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ 216 (350)
T 3t7v_A 141 ---LPIMISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV-GNDI 216 (350)
T ss_dssp ---SCEEEECSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS-SCCH
T ss_pred ---ceEEEeCCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec-CCCH
Confidence 234567888999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHccCCCeEEEEeeeccCCcccccCCCCCCCCHHHHHHHHHHHHHHHHh
Q psy2378 782 SELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLLKN 839 (956)
Q Consensus 782 e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 839 (956)
+++.++++++.+++++++.+++|.|.||||+++... ++.++..++...++-.|..
T Consensus 217 e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~---~~~~e~l~~ia~~Rl~lp~ 271 (350)
T 3t7v_A 217 ESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRD---KSNLSELKIISVLRLMFPK 271 (350)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCC---CCCCCHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhCCCCEEEecceeeCCCCcCccCCC---CChHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999987643 2333334455555444433
No 64
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.74 E-value=1.4e-17 Score=185.72 Aligned_cols=189 Identities=11% Similarity=0.104 Sum_probs=151.3
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCCHHHHHHHHHHHHHcC
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWG 89 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G 89 (956)
++|+++|||.++|+..++..+.+.|+.+++.+++++.+.+......+... .+.|+.+|++..+|+ +.+.++.+.++|
T Consensus 12 ~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~--~~~p~gvnl~~~~~~-~~~~~~~a~~~g 88 (332)
T 2z6i_A 12 DYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL--TDKPFGVNIMLLSPF-VEDIVDLVIEEG 88 (332)
T ss_dssp SSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH--CCSCEEEEECTTSTT-HHHHHHHHHHTT
T ss_pred CCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh--cCCCEEEEecCCCCC-HHHHHHHHHHCC
Confidence 77999999999999999998888888899999988776653111111111 257999999987765 778888899999
Q ss_pred CCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEE
Q psy2378 90 YDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV 169 (956)
Q Consensus 90 ~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~v 169 (956)
+|+|++|+|||. ++++.+++ .++|+.+|+. ..+.++.+++.|+|+|.+
T Consensus 89 ~d~V~~~~g~p~--------------------~~i~~l~~-~g~~v~~~v~-----------~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 89 VKVVTTGAGNPS--------------------KYMERFHE-AGIIVIPVVP-----------SVALAKRMEKIGADAVIA 136 (332)
T ss_dssp CSEEEECSSCGG--------------------GTHHHHHH-TTCEEEEEES-----------SHHHHHHHHHTTCSCEEE
T ss_pred CCEEEECCCChH--------------------HHHHHHHH-cCCeEEEEeC-----------CHHHHHHHHHcCCCEEEE
Confidence 999999999982 25666665 4899998872 135688899999999999
Q ss_pred cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcch
Q psy2378 170 HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 170 h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
+++.. .|..| ...+|+.+.++++.+ ++|||++|||.|++++.++++. ||+|++||+++.+|.+.
T Consensus 137 ~g~~~--GG~~g------~~~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 137 EGMEA--GGHIG------KLTTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESN 201 (332)
T ss_dssp ECTTS--SEECC------SSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCC
T ss_pred ECCCC--CCCCC------CccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCcccc
Confidence 87631 23222 246899999999988 7999999999999999999988 99999999999999653
No 65
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.74 E-value=1.6e-17 Score=186.88 Aligned_cols=201 Identities=14% Similarity=0.106 Sum_probs=162.8
Q ss_pred CCCcceeeeeeecccccCCcch-HHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHHHHHHHHcccCCC
Q psy2378 624 IPYKVIINEAIELVKSFGNIDE-KKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLFKKN 702 (956)
Q Consensus 624 ~P~c~~~Ce~C~l~k~~~~~~~-~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll~~i~~~~~~~~~ 702 (956)
...|+..|.||......+.... ....+.++++++...+ ..+..+.|.||.+..++.+++.++++.+++.
T Consensus 60 t~~C~~~C~fC~~~~~~~~~~~~~ls~eei~~~i~~~~~----~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~------ 129 (348)
T 3iix_A 60 SNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQ----FGAKTIVLQSGEDPYXMPDVISDIVKEIKKM------ 129 (348)
T ss_dssp ECCCSCCCTTCTTCTTCCSSCCCBCCHHHHHHHHHHHHH----TTCSEEEEEESCCGGGTTHHHHHHHHHHHTT------
T ss_pred cCCcCCcCccCCCCCCCCCcCceeCCHHHHHHHHHHHHH----CCCCEEEEEeCCCCCccHHHHHHHHHHHHhc------
Confidence 6799999999987654332211 1235667777665433 2467889999996666767788888888764
Q ss_pred ceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCeeEEEEeecCCCCCHH
Q psy2378 703 ISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIYALPNQTLS 782 (956)
Q Consensus 703 ~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~~~~~i~~dlI~GlPgqT~e 782 (956)
.+.+.+++..++++.++.|+++|++++++|+||+++++++.+++.++.+++.++++.+++.|+.+++.+|+|+||||.+
T Consensus 130 -~~~i~~s~g~l~~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e 208 (348)
T 3iix_A 130 -GVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTID 208 (348)
T ss_dssp -SCEEEEECCCCCHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHH
T ss_pred -CceEEEecCCCCHHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHH
Confidence 2344467888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCeEEEEeeeccCCcccccCCCCCCCCHHHHHHHHHHHHHHHH
Q psy2378 783 ELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLLK 838 (956)
Q Consensus 783 ~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 838 (956)
++.++++++.+++++++.+++|.|.||||+++.. .++.++..++...++..+.
T Consensus 209 ~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~~~---~~~~~e~~~~~a~~R~~lp 261 (348)
T 3iix_A 209 DLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEK---KGDFTLTLKMVALTRILLP 261 (348)
T ss_dssp HHHHHHHHHHHHTCSEECCEECCCCTTSTTTTSC---CCCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhcCCCEEeeeeeecCCCCCcccCC---CCCHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999998753 3455555555555554443
No 66
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.71 E-value=1.5e-17 Score=185.45 Aligned_cols=213 Identities=12% Similarity=0.093 Sum_probs=144.9
Q ss_pred cccccCCCceEEccCcCcCCH------HHHHHHHHcCCCcEEEecccccccccC-Cchhc--cccCCCCCCEE-----EE
Q psy2378 4 INSKYNKRKISIAPMMNLTDR------HCRMFHRQITRYSWLYTEMFTTQAILG-NKKHC--LDFNAEEHPIA-----FQ 69 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~~td~------~fR~~~~~~g~~~l~~tem~~~~~l~~-~~~~~--~~~~~~~~p~~-----vQ 69 (956)
.+..+ ++|+++|||++.++. ++++.|+++| ..++++||.++ +.. ..... +.....+.|++ .|
T Consensus 53 ~g~~l-~~P~~iapm~g~~~~~~~~~~~la~~a~~~G-~~~~~~~~~~~--le~~~~~~~~ql~~~~~d~pv~~~~~~~q 128 (332)
T 1vcf_A 53 LGKTL-KAPFLIGAMTGGEENGERINLALAEAAEALG-VGMMLGSGRIL--LERPEALRSFRVRKVAPKALLIANLGLAQ 128 (332)
T ss_dssp TTEEE-SSSEEECCCC---CCHHHHHHHHHHHHHHHT-CEEEEEECHHH--HHCTTTHHHHCCTTTCSSSCEEEEEEGGG
T ss_pred CCccc-CCceEEeccccCCcchhHHHHHHHHHHHHcC-CCEEeCCchhc--ccCCCccceEEeeccCCCceeecccChhh
Confidence 44466 889999999998864 8999999999 58999999875 321 11111 22223467886 67
Q ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE-eccCCCCCCc
Q psy2378 70 VGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK-HRIGIDDINS 148 (956)
Q Consensus 70 l~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK-ir~g~~~~~~ 148 (956)
+++.+++.+.++++. .|+|++++|..++..-. . .+. .+.+.+.++++++++ +++||.|| +..|+ +
T Consensus 129 ~~~~~~~~~~~a~~~---~~~~a~~i~~n~~~~~~-~---~~~--~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~----~ 194 (332)
T 1vcf_A 129 LRRYGRDDLLRLVEM---LEADALAFHVNPLQEAV-Q---RGD--TDFRGLVERLAELLP-LPFPVMVKEVGHGL----S 194 (332)
T ss_dssp GGTCCHHHHHHHHHH---HTCSEEEEECCHHHHHH-T---TSC--CCCTTHHHHHHHHCS-CSSCEEEECSSSCC----C
T ss_pred hhccChHHHHHHHhh---cCCCceeeccchHHHHh-c---CCC--ccHHHHHHHHHHHHc-CCCCEEEEecCCCC----C
Confidence 788889999888765 36787666653321100 0 111 112236889999999 99999999 44332 1
Q ss_pred HHHHHHHHHHHHHcCCCEEEE--cccccc------ccc-CCC-CCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIV--HARNAF------LKK-LNP-KQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~v--h~r~~~------~~g-~~~-~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
.+.++.++++|+|+|+| |+++.+ .+. ..+ ....+.++..|+.+.++++.++++|||++|||.+++|
T Consensus 195 ----~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d 270 (332)
T 1vcf_A 195 ----REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTD 270 (332)
T ss_dssp ----HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHH
T ss_pred ----HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHH
Confidence 35588999999999999 555310 000 000 0002234567899999999876799999999999999
Q ss_pred HHHHhhh-cCEEEEccccccC
Q psy2378 219 IDLHLNY-IDGVMLGREAYKN 238 (956)
Q Consensus 219 a~~~l~~-ad~VmiGR~~l~~ 238 (956)
+.++|.. ||+||+||+++..
T Consensus 271 ~~kal~~GAd~V~igr~~l~~ 291 (332)
T 1vcf_A 271 GAKALALGADLLAVARPLLRP 291 (332)
T ss_dssp HHHHHHHTCSEEEECGGGHHH
T ss_pred HHHHHHhCCChHhhhHHHHHH
Confidence 9999988 9999999976643
No 67
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.68 E-value=4.4e-17 Score=189.40 Aligned_cols=197 Identities=11% Similarity=-0.005 Sum_probs=156.5
Q ss_pred cCccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHhccccc-ccHHHHHHHHHHHHHhHHHHHHHHHhhhccCccccCHHH
Q psy2378 529 KTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYK-VDKKYFYLILRGVINDINFLRYDLSLIIDRSINELSSIE 607 (956)
Q Consensus 529 ~~~r~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~lv~gv~~~~~~lD~~i~~~~~~~~~rl~~~~ 607 (956)
.++++++|+.|+|+||+++.++.+.+.+++.+.....+++ .|++|+++||+||++|+..||++|+++++.+++++++++
T Consensus 7 ~~~~~~~R~~A~~~L~~v~~~~~~~~~~l~~~~~~~~l~~~~dr~~~~~lv~gvlr~~~~ld~~i~~~~~~~~~~~~~~~ 86 (450)
T 2yxl_A 7 KLSIPPKGIRAIIEAIRLGEIIKPSQYAKREAFKKHDVEEAWLNRVLTMIFYDIMKKQGLIDKVIKEIVGVTPLILDPWL 86 (450)
T ss_dssp CBCCCHHHHHHHHHHHHHTTTSSSTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGSCHHH
T ss_pred ccCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHhHHHHHHHHHHhccCChhhcCHHH
Confidence 4567899999999999999988888888877766666888 999999999999999999999999999977899999999
Q ss_pred HHHHHHHHHhhcccCCCCCcceee----eeeecccccCCcchHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCH
Q psy2378 608 YVVLLIGTYELKSHYKIPYKVIIN----EAIELVKSFGNIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISD 683 (956)
Q Consensus 608 ~~iLr~~~yel~~~~~~P~c~~~C----e~C~l~k~~~~~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~ 683 (956)
++|||+|+|||+| ++|..+.++ +++++++.++.....+|+|+||+.+.+...... .....+.+..+.|.|+..
T Consensus 87 ~~iLrla~yell~--~ip~~~ain~~~~eaVelak~~~~~~~~~fvNgvL~~~~r~~~~~~-~~~~~~~~~~~~P~w~~~ 163 (450)
T 2yxl_A 87 RAALRVAVDIALF--HDPSSQTIKNLRWKASDFISSRTHPYVGMYFWDLLDKIFEYKPNPK-NELEELEWKYLAPSWLIE 163 (450)
T ss_dssp HHHHHHHHHHHHH--SCBCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCCCCCC-SHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHhc--CCCchHHhccccHHHHHHHHhccccccccchHHHHHHHhhcccccc-chhhhhhhHhcCcHHHHH
Confidence 9999999999999 799999999 999999998888888999999999876421111 112223444578988877
Q ss_pred HHHHHHHHHHHHHc-ccC-CCceeEEEeCCCCCCHH-HHHHHHHcCCC
Q psy2378 684 TGLDYLLKNIKKLL-LFK-KNISITLEANPSTFEIE-KFHSYSIIGIN 728 (956)
Q Consensus 684 ~~l~~ll~~i~~~~-~~~-~~~eitle~np~~it~e-~L~~L~~~Gv~ 728 (956)
.+...+.+...+.+ .++ ..+++++++|+...+.+ +++.|.+.|+.
T Consensus 164 ~~~~~~g~~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~ 211 (450)
T 2yxl_A 164 RVKGILGDETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVE 211 (450)
T ss_dssp HHHHHHGGGHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCC
T ss_pred HHHHHhhHHHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCcc
Confidence 76655432221111 123 34689999999988754 57888888864
No 68
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.65 E-value=5.9e-16 Score=174.99 Aligned_cols=204 Identities=13% Similarity=0.109 Sum_probs=153.8
Q ss_pred cccccCCCceEEccCcC--c----CCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCCHHH
Q psy2378 4 INSKYNKRKISIAPMMN--L----TDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKK 77 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~--~----td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~ 77 (956)
.+.++ ++|+++|||++ . ++.++++.|+++| ..+++++ ++...+. +... . .+.|..+||+-..++.
T Consensus 67 ~G~~l-~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G-~~~~vss-~s~~~le----~i~~-~-~~~~~~fQly~~~~~~ 137 (380)
T 1p4c_A 67 LGKRQ-SMPLLIGPTGLNGALWPKGDLALARAATKAG-IPFVLST-ASNMSIE----DLAR-Q-CDGDLWFQLYVIHREI 137 (380)
T ss_dssp TTEEE-SSSEEECCCSCGGGTSTTHHHHHHHHHHHHT-CCEEECT-TCSSCHH----HHHH-H-CCSCEEEEECCSSHHH
T ss_pred CCeec-CCceEecCccccccCCCcHHHHHHHHHHHcC-CCeecCc-cccCCHH----HHHh-c-cCCCeEEEEEechHHH
Confidence 34567 89999999966 5 8999999999999 4788887 4433332 1111 1 3678999998555777
Q ss_pred HHHHHHHHHHcCCCEEEe--------------cCCCCcc---eee--------e--Ccccccc---cC---ChHHHHHHH
Q psy2378 78 LAKSAKIIQKWGYDEINL--------------NCGCPSN---RVQ--------N--GFFGAIL---MT---KPLLVSDCI 124 (956)
Q Consensus 78 ~~~aA~~~~~~G~d~Iei--------------N~gCP~~---~~~--------~--~~~G~~l---~~---~~~~~~eiv 124 (956)
..+..++++++|++++.| |.||+.+ +.. . ...+.++ +. +|++..+++
T Consensus 138 ~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i 217 (380)
T 1p4c_A 138 AQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEAL 217 (380)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHH
Confidence 777888888999988865 6788543 111 0 1112222 23 788888999
Q ss_pred HHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEE--cccccccccCCCCCCCCCCcCcHHHHHHHHHhC
Q psy2378 125 KAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 202 (956)
Q Consensus 125 ~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~v--h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~ 202 (956)
+++++.+++||.+|. +. ..+.++.+.++|+|+|.| |+++. ...++.+|+.+.++++.+
T Consensus 218 ~~i~~~~~~Pv~vkg---v~-------t~e~a~~a~~aGad~I~vs~~gg~~----------~d~~~~~~~~l~~v~~~~ 277 (380)
T 1p4c_A 218 RWLRDLWPHKLLVKG---LL-------SAEDADRCIAEGADGVILSNHGGRQ----------LDCAISPMEVLAQSVAKT 277 (380)
T ss_dssp HHHHHHCCSEEEEEE---EC-------CHHHHHHHHHTTCSEEEECCGGGTS----------CTTCCCGGGTHHHHHHHH
T ss_pred HHHHHhcCCCEEEEe---cC-------cHHHHHHHHHcCCCEEEEcCCCCCc----------CCCCcCHHHHHHHHHHHc
Confidence 999999999999994 21 246789999999999999 55542 112346899999999988
Q ss_pred CCceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc
Q psy2378 203 PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 237 (956)
Q Consensus 203 ~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~ 237 (956)
++|||++|||.+++|+.+++.. ||+||+||+++.
T Consensus 278 -~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 278 -GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLY 312 (380)
T ss_dssp -CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHH
T ss_pred -CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHH
Confidence 6899999999999999999988 999999999874
No 69
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.63 E-value=1.4e-16 Score=184.21 Aligned_cols=190 Identities=14% Similarity=0.142 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHhcccccccHHHHHHHHHHHHHhHHHHHHHHHhhhccCccccCHHHHHHHH
Q psy2378 533 HRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYDLSLIIDRSINELSSIEYVVLL 612 (956)
Q Consensus 533 ~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~lD~~i~~~~~~~~~rl~~~~~~iLr 612 (956)
.++|+.|+|+||+++.++.+.+.+++... ..++++|++|+++||+||++|+..||++|+++++.+++++++++++|||
T Consensus 5 ~~aR~~A~~~L~~~~~~~~~~~~~l~~~~--~~~~~~dr~~~~~lv~gvlr~~~~ld~~i~~~~~~~~~~~~~~~~~iLr 82 (429)
T 1sqg_A 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIM 82 (429)
T ss_dssp CCHHHHHHHHHHHHHHHCCCHHHHHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCGGGHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCHHHHHHHHH--hhCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhcCHHHHHHHH
Confidence 46999999999999998888887776533 3577899999999999999999999999999997788999999999999
Q ss_pred HHHHhhcccCCCCCcceeeeeeecccccCCcchHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHH--
Q psy2378 613 IGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLL-- 690 (956)
Q Consensus 613 ~~~yel~~~~~~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll-- 690 (956)
+|+|||+|+ ++|..+.+++++++++.++.....+++|++++.+.+..+........... ..+.|.|+...+.+.+-
T Consensus 83 l~~yel~~~-~~p~~~~ineaVelak~~~~~~~~~fvN~vL~~~~r~~~~~~~~~~~~~~-~~~~p~w~~~~~~~~~g~~ 160 (429)
T 1sqg_A 83 VGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQ 160 (429)
T ss_dssp HHHHHHHHC-CSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHHHTTSGG-GGCSCHHHHHHHHHHCTTT
T ss_pred HHHHHHhhC-CCCchHhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcccccchhhhh-hhcCcHHHHHHHHHHhhHH
Confidence 999999997 79999999999999999988888999999999886543221100000111 45688887776655432
Q ss_pred -HHHHHHcccCCCceeEEEeCCCCCCHH-HHHHHHHcCCC
Q psy2378 691 -KNIKKLLLFKKNISITLEANPSTFEIE-KFHSYSIIGIN 728 (956)
Q Consensus 691 -~~i~~~~~~~~~~eitle~np~~it~e-~L~~L~~~Gv~ 728 (956)
+.+.+.+ ...+++++++|+...+.+ +++.|.+.|+.
T Consensus 161 ~~~~~~~~--~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~ 198 (429)
T 1sqg_A 161 WQSIVEAN--NQRPPMWLRINRTHHSRDSWLALLDEAGMK 198 (429)
T ss_dssp HHHHHHHH--TSCCCEEEEECTTTCCHHHHHHHHHHTTCC
T ss_pred HHHHHHhC--CCCCCeEEEEcCCCCCHHHHHHHHHhCCCc
Confidence 2222222 334579999999988754 56888888864
No 70
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.63 E-value=8.1e-16 Score=172.10 Aligned_cols=216 Identities=11% Similarity=0.092 Sum_probs=145.9
Q ss_pred ccccccCCCceEEccCcCcCCHHH------HHHHHHcCCCcEEEeccccc--ccccCCchhccc-cCCCCCCEEE-----
Q psy2378 3 MINSKYNKRKISIAPMMNLTDRHC------RMFHRQITRYSWLYTEMFTT--QAILGNKKHCLD-FNAEEHPIAF----- 68 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~~f------R~~~~~~g~~~l~~tem~~~--~~l~~~~~~~~~-~~~~~~p~~v----- 68 (956)
+.+..+ +.|+++|||+|.|+.++ +..|+++| ..+.+.||..+ +.....+.+.+. ..+ +.|++.
T Consensus 53 ~~g~~l-~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G-~~~~vGs~~~~l~~~~~~~s~~~vr~~ap-~~~~~anlg~~ 129 (368)
T 3vkj_A 53 FFRKEI-SVPVMVTGMTGGRNELGRINKIIAEVAEKFG-IPMGVGSQRVAIEKAEARESFAIVRKVAP-TIPIIANLGMP 129 (368)
T ss_dssp ETTEEE-SSSEEECCCCCSSHHHHHHHHHHHHHHHHHT-CCEECCCCHHHHHCGGGSHHHHHHHHHCS-SSCEEEEEEGG
T ss_pred ECCEec-cCCeEEecCCCCCchhhHHHHHHHHHHHHhC-CCeeeecchhccCCHHHHhhHHHHHHhCc-CcceecCcCee
Confidence 345566 88999999999999885 88999998 68999999654 333211112122 334 456665
Q ss_pred EecC-CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChH-HHHHHHHHHhhccCccEEEEeccCCCCC
Q psy2378 69 QVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPL-LVSDCIKAMRDSVEIDITVKHRIGIDDI 146 (956)
Q Consensus 69 Ql~g-~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~-~~~eiv~~v~~~~~~pv~vKir~g~~~~ 146 (956)
||.+ .+++.+.++++.+ ++|+..|+||.++ .... ..|. .+.+ ...++++.+++.+++||.||. .|+...
T Consensus 130 ql~~~~~~~~~~~av~~~-~a~al~Ihln~~~---~~~~-p~g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s 200 (368)
T 3vkj_A 130 QLVKGYGLKEFQDAIQMI-EADAIAVHLNPAQ---EVFQ-PEGE---PEYQIYALEKLRDISKELSVPIIVKE-SGNGIS 200 (368)
T ss_dssp GGGTTCCHHHHHHHHHHT-TCSEEEEECCHHH---HHHS-SSCC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCC
T ss_pred ecCCCCCHHHHHHHHHHh-cCCCeEEEecchh---hhhC-CCCC---chhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCC
Confidence 4445 7888888888877 6667777777432 1111 1111 1222 367889999999999999997 555431
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEcc--ccccc-----ccCC-C-------CCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 147 NSYDFVRDFVGTVSSAGCRTFIVHA--RNAFL-----KKLN-P-------KQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 147 ~~~~~~~~~a~~l~~~G~~~i~vh~--r~~~~-----~g~~-~-------~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
.+.|+.++++|+|+|+|++ +|.+. .... . ......+......+.++++.++++|||++|
T Consensus 201 ------~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~G 274 (368)
T 3vkj_A 201 ------METAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSG 274 (368)
T ss_dssp ------HHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEES
T ss_pred ------HHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEEC
Confidence 3678999999999999954 43110 0000 0 000000112236678888888679999999
Q ss_pred CCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 212 GIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 212 gI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
||.++.|+.+++.. ||+||+||+++
T Consensus 275 GI~~~~d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 275 GIRSGLDAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 99999999999998 99999999655
No 71
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.62 E-value=8.1e-16 Score=161.44 Aligned_cols=192 Identities=13% Similarity=0.094 Sum_probs=137.8
Q ss_pred eEEccCcCcCCHHHHHHHH---HcCCCcE--EEeccccc-ccccCCchhccccCCCCCCEEEEecCCCHHHHHHHHHHHH
Q psy2378 13 ISIAPMMNLTDRHCRMFHR---QITRYSW--LYTEMFTT-QAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQ 86 (956)
Q Consensus 13 i~lAPM~~~td~~fR~~~~---~~g~~~l--~~tem~~~-~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~ 86 (956)
..|.|+ .|+.+||.+|+ ++| ++. ++++|++. ...+. ..++... .+.|+.+|+.++.+.+ ++.+.
T Consensus 11 t~l~p~--~t~~~i~~l~~~a~~~g-~~~v~v~~~~v~~~~~~l~-~v~v~~v--~~~P~g~~~~~~k~~~----~~~A~ 80 (225)
T 1mzh_A 11 AALKPH--LSEKEIEEFVLKSEELG-IYAVCVNPYHVKLASSIAK-KVKVCCV--IGFPLGLNKTSVKVKE----AVEAV 80 (225)
T ss_dssp EECCTT--CCHHHHHHHHHHHHHTT-CSEEEECGGGHHHHHHHCS-SSEEEEE--ESTTTCCSCHHHHHHH----HHHHH
T ss_pred cccCCC--CCHHHHHHHHHHHHHhC-CeEEEECHHHHHHHHHHhc-CCceeeE--ecCCCCccchhhhHHH----HHHHH
Confidence 347888 68999999998 787 455 55667754 33332 1122111 1456666655544433 46677
Q ss_pred HcCCCEEE--ecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEe---ccCCCCCCcHHHHHHHHHHHHH
Q psy2378 87 KWGYDEIN--LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH---RIGIDDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 87 ~~G~d~Ie--iN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi---r~g~~~~~~~~~~~~~a~~l~~ 161 (956)
+.|+|+|| +|+||- +. .+++.+.+.+++++++++ |+++|+ +.++++ ++..++++.+++
T Consensus 81 ~~Gad~Id~viN~g~~----~~--------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~----~~~~~~a~~a~e 143 (225)
T 1mzh_A 81 RDGAQELDIVWNLSAF----KS--------EKYDFVVEELKEIFRETP-SAVHKVIVETPYLNE----EEIKKAVEICIE 143 (225)
T ss_dssp HTTCSEEEEECCHHHH----HT--------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCH----HHHHHHHHHHHH
T ss_pred HcCCCEEEEEecHHHH----hc--------CChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCH----HHHHHHHHHHHH
Confidence 79999999 799991 11 245678888999999998 999999 777654 357899999999
Q ss_pred cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 162 AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 162 ~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
+|+|+|.+ ++ |+ +.+.++|+.++.+++.+. ++||+++|||.|++|+.++++. ||.|.++++ .
T Consensus 144 aGad~I~t--st----g~------~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~----~ 207 (225)
T 1mzh_A 144 AGADFIKT--ST----GF------APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSG----I 207 (225)
T ss_dssp HTCSEEEC--CC----SC------SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH----H
T ss_pred hCCCEEEE--CC----CC------CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH----H
Confidence 99999933 22 11 123479999999998763 6999999999999999999988 998877765 3
Q ss_pred cchHHHHH
Q psy2378 240 FLMSNFDL 247 (956)
Q Consensus 240 ~l~~~i~~ 247 (956)
++++++.+
T Consensus 208 ~i~~~~~~ 215 (225)
T 1mzh_A 208 SIAEEFLK 215 (225)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56655543
No 72
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.60 E-value=1.1e-14 Score=161.71 Aligned_cols=188 Identities=10% Similarity=0.121 Sum_probs=146.1
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCCHHHHHHHHHHHHHcC
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWG 89 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G 89 (956)
+.||++|||+++|+..++..+...|+.+++.+.+++.+.+.....+.... .+.|+.++++..+|+ +.+.++.+.++|
T Consensus 26 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~--~~~p~gVnl~~~~~~-~~~~~~~~~~~g 102 (326)
T 3bo9_A 26 EHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK--TDKPFGVNIILVSPW-ADDLVKVCIEEK 102 (326)
T ss_dssp SSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT--CSSCEEEEEETTSTT-HHHHHHHHHHTT
T ss_pred CCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh--cCCCEEEEEeccCCC-HHHHHHHHHHCC
Confidence 67999999999999999999999998889988887766543111111111 257999999986654 456666777899
Q ss_pred CCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEE
Q psy2378 90 YDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV 169 (956)
Q Consensus 90 ~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~v 169 (956)
+|.|.+|+|||. ++++.+++ .++|+.+++.. .+.++.++++|+|+|.+
T Consensus 103 ~d~V~l~~g~p~--------------------~~~~~l~~-~g~~v~~~v~s-----------~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 103 VPVVTFGAGNPT--------------------KYIRELKE-NGTKVIPVVAS-----------DSLARMVERAGADAVIA 150 (326)
T ss_dssp CSEEEEESSCCH--------------------HHHHHHHH-TTCEEEEEESS-----------HHHHHHHHHTTCSCEEE
T ss_pred CCEEEECCCCcH--------------------HHHHHHHH-cCCcEEEEcCC-----------HHHHHHHHHcCCCEEEE
Confidence 999999999882 23455554 37888887631 35678889999999999
Q ss_pred cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcc
Q psy2378 170 HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 170 h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l 241 (956)
+++. ..|.+| ...+|+.+.++++.+ ++|||+.|||.|++++.++++. ||+|++|++++..|..
T Consensus 151 ~g~~--~GG~~G------~~~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 151 EGME--SGGHIG------EVTTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVES 214 (326)
T ss_dssp ECTT--SSEECC------SSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSC
T ss_pred ECCC--CCccCC------CccHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccc
Confidence 9875 233333 135899999999987 7999999999999999999988 9999999999988764
No 73
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.58 E-value=2.1e-14 Score=159.99 Aligned_cols=190 Identities=12% Similarity=0.124 Sum_probs=145.0
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccc-cccccCCchhccccCCCCCCEEEEecCCC---HHHHHHHHHHH
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFT-TQAILGNKKHCLDFNAEEHPIAFQVGDNE---PKKLAKSAKII 85 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~-~~~l~~~~~~~~~~~~~~~p~~vQl~g~~---~~~~~~aA~~~ 85 (956)
+.||++|||+++|+..++..+...|+.+++.+++.+ .+.+.....++... .+.|+.++++.+. +..+.+.++.+
T Consensus 15 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~--~~~p~~v~l~v~~~~~~~~~~~~~~~~ 92 (328)
T 2gjl_A 15 EHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCREL--TDRPFGVNLTLLPTQKPVPYAEYRAAI 92 (328)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHH--CSSCCEEEEEECCCSSCCCHHHHHHHH
T ss_pred CCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEeccccccCccHHHHHHHH
Confidence 569999999999999999999999988999887755 44432111111111 2478999999861 23366777788
Q ss_pred HHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCC
Q psy2378 86 QKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCR 165 (956)
Q Consensus 86 ~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~ 165 (956)
.++|+|+|.+|+||| .++++.+++. ++|+.+++.. .+.++.+++.|+|
T Consensus 93 ~~~g~d~V~~~~g~p--------------------~~~~~~l~~~-gi~vi~~v~t-----------~~~a~~~~~~GaD 140 (328)
T 2gjl_A 93 IEAGIRVVETAGNDP--------------------GEHIAEFRRH-GVKVIHKCTA-----------VRHALKAERLGVD 140 (328)
T ss_dssp HHTTCCEEEEEESCC--------------------HHHHHHHHHT-TCEEEEEESS-----------HHHHHHHHHTTCS
T ss_pred HhcCCCEEEEcCCCc--------------------HHHHHHHHHc-CCCEEeeCCC-----------HHHHHHHHHcCCC
Confidence 889999999999887 1455666665 8888876521 2457788999999
Q ss_pred EEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 166 TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 166 ~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
+|.++++.. .|..|.. ...+|+.+.++++.+ ++|||+.|||.+++++.++++. ||+|++||+++..|.
T Consensus 141 ~i~v~g~~~--GG~~G~~----~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 141 AVSIDGFEC--AGHPGED----DIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINMGTRFLATRE 209 (328)
T ss_dssp EEEEECTTC--SBCCCSS----CCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred EEEEECCCC--CcCCCCc----cccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcc
Confidence 999987652 2332221 246899999999887 7999999999999999999987 999999999999887
No 74
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.58 E-value=2.3e-14 Score=162.04 Aligned_cols=197 Identities=15% Similarity=0.164 Sum_probs=148.1
Q ss_pred CCceEEccCcC-cCCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCCHH------------
Q psy2378 10 KRKISIAPMMN-LTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPK------------ 76 (956)
Q Consensus 10 ~~~i~lAPM~~-~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~------------ 76 (956)
+.||+.|||++ +|+..++..+...|+.+++.++|++.+.+.....+..... +.|+.||++...+.
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~--~~p~gVnl~~~~~~~~~~~~~~~~~~ 87 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLT--GRPFGVNVFMPQPELAESGAVEVYAH 87 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHC--CSCEEEEEECCCCCC---CHHHHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhC--CCCeEEEEecCCCCcccHHHHHHHHH
Confidence 67999999995 9999999999999988999999988887742111111111 36899999876541
Q ss_pred ----------------------HHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCcc
Q psy2378 77 ----------------------KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID 134 (956)
Q Consensus 77 ----------------------~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p 134 (956)
.+.+.++.+.+.|+|.|.+|+|||. .++++.+++ .++|
T Consensus 88 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~-------------------~~~i~~~~~-~g~~ 147 (369)
T 3bw2_A 88 QLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPD-------------------REVIARLRR-AGTL 147 (369)
T ss_dssp HTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCC-------------------HHHHHHHHH-TTCE
T ss_pred HHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCc-------------------HHHHHHHHH-CCCe
Confidence 1455667788899999999999982 245566665 3788
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCC-----cCcHHHHHHHHHhCCCceEEE
Q psy2378 135 ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP-----ILKYNFVYNLKKDFPELEIII 209 (956)
Q Consensus 135 v~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~-----~~~~~~i~~v~~~~~~ipVi~ 209 (956)
+.+++. + .+.++.++++|+|+|.++++.. .|+.+....... ...|+.+.++++.+ ++|||+
T Consensus 148 v~~~v~-------t----~~~a~~a~~~GaD~i~v~g~~~--GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPVia 213 (369)
T 3bw2_A 148 TLVTAT-------T----PEEARAVEAAGADAVIAQGVEA--GGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVA 213 (369)
T ss_dssp EEEEES-------S----HHHHHHHHHTTCSEEEEECTTC--SEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEE
T ss_pred EEEECC-------C----HHHHHHHHHcCCCEEEEeCCCc--CCcCCCcccccccccccccHHHHHHHHHHhc-CceEEE
Confidence 888762 1 2457889999999999987642 232222111111 12399999999887 799999
Q ss_pred ecCCCCHHHHHHHhhh-cCEEEEccccccCCcch
Q psy2378 210 NGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 210 nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
.|||.+++++.++++. ||+|++||+++.+|++.
T Consensus 214 aGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 214 AGGIMRGGQIAAVLAAGADAAQLGTAFLATDESG 247 (369)
T ss_dssp ESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccC
Confidence 9999999999999988 99999999999999874
No 75
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.57 E-value=2.2e-14 Score=159.85 Aligned_cols=197 Identities=13% Similarity=0.150 Sum_probs=141.6
Q ss_pred ccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhccc-cCCCCCCEEEEecCCCHHHHHHHHH
Q psy2378 5 NSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLD-FNAEEHPIAFQVGDNEPKKLAKSAK 83 (956)
Q Consensus 5 ~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~-~~~~~~p~~vQl~g~~~~~~~~aA~ 83 (956)
+..+ ++||++|||+++|+..|+..+.+.|+.++++++|.... ..++. ..+.+.|+.+|+ |.+++.+.. ++
T Consensus 42 g~~l-~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~------~~~i~~~~~~g~~v~v~~-g~~~~~~~~-a~ 112 (336)
T 1ypf_A 42 KHKF-KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKR------ISFIRDMQSRGLIASISV-GVKEDEYEF-VQ 112 (336)
T ss_dssp TEEE-SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGH------HHHHHHHHHTTCCCEEEE-CCSHHHHHH-HH
T ss_pred CEEe-cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHH------HHHHHHHHhcCCeEEEeC-CCCHHHHHH-HH
Confidence 4456 88999999999999999764345555788888765321 11111 122355899995 777876654 66
Q ss_pred HHHHcC--CCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHH
Q psy2378 84 IIQKWG--YDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 84 ~~~~~G--~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~ 161 (956)
.+.++| ++.|++|++. | ++....++++++++.++.|+.+|-. .. ..+.|+.+++
T Consensus 113 ~~~~~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G~--v~-------s~e~A~~a~~ 168 (336)
T 1ypf_A 113 QLAAEHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAGN--VG-------TPEAVRELEN 168 (336)
T ss_dssp HHHHTTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEEE--EC-------SHHHHHHHHH
T ss_pred HHHhcCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEECC--cC-------CHHHHHHHHH
Confidence 777888 9999999742 2 6788899999999999644444421 11 1367899999
Q ss_pred cCCCEEEE--cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc
Q psy2378 162 AGCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 237 (956)
Q Consensus 162 ~G~~~i~v--h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~ 237 (956)
+|+|+|.+ |+++...... ......+...++.+.++++.+ ++|||++|||.+++|+.++++. ||+||+||+++.
T Consensus 169 aGad~Ivvs~hgG~~~~~~~--~~~~g~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 169 AGADATKVGIGPGKVCITKI--KTGFGTGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp HTCSEEEECSSCSTTCHHHH--HHSCSSTTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred cCCCEEEEecCCCceeeccc--ccCcCCchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 99999999 5543110000 000001123688999999988 8999999999999999999988 999999999995
No 76
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.54 E-value=2.3e-14 Score=159.63 Aligned_cols=215 Identities=12% Similarity=0.109 Sum_probs=131.3
Q ss_pred ccccccCCCceEEccCcCcCCHH------HHHHHHHcCCCcEEEecccccccccC-CchhccccCCCCCCEEEEecCCCH
Q psy2378 3 MINSKYNKRKISIAPMMNLTDRH------CRMFHRQITRYSWLYTEMFTTQAILG-NKKHCLDFNAEEHPIAFQVGDNEP 75 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~~------fR~~~~~~g~~~l~~tem~~~~~l~~-~~~~~~~~~~~~~p~~vQl~g~~~ 75 (956)
+.+.++ +.|+++|||++.++.+ |+..|++.| ..+.+.||..+-.-.. ......... .+.+++..|....+
T Consensus 80 i~g~~l-~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G-~~~~vGs~~~~le~~~~~~~~v~r~~-P~~~~ianig~~~~ 156 (365)
T 3sr7_A 80 FAGQDF-DFPFYINAMTGGSQKGKEVNEKLAQVADTCG-LLFVTGSYSTALKNPDDTSYQVKKSR-PHLLLATNIGLDKP 156 (365)
T ss_dssp ETTEEE-SSSEEEECC----CCCHHHHHHHHHHHHHHT-CCEEC------------------------CCEEEEEETTSC
T ss_pred ECCEEc-cCceEeccccCCCcchhHHHHHHHHHHHHcC-CCeecccccccccCccccceEehhhC-CCCcEEEEeCCCCC
Confidence 345566 8899999999988865 999999998 5688888764221111 111122223 36789999986544
Q ss_pred HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHH
Q psy2378 76 KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDF 155 (956)
Q Consensus 76 ~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~ 155 (956)
.+ ++.+.++..|+|+++||.-.....+... | ..+.+-..+.++.+++.+++||.||. .|+.. ..+.
T Consensus 157 ~e--~~~~~ve~~~adal~ihln~~qe~~~p~--G---d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~------s~e~ 222 (365)
T 3sr7_A 157 YQ--AGLQAVRDLQPLFLQVHINLMQELLMPE--G---EREFRSWKKHLSDYAKKLQLPFILKE-VGFGM------DVKT 222 (365)
T ss_dssp HH--HHHHHHHHHCCSCEEEEECHHHHHTSSS--S---CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCC------CHHH
T ss_pred HH--HHHHHHHhcCCCEEEEeccccccccCCC--C---CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCC------CHHH
Confidence 32 5566667789999988765321111111 1 23445577899999999999999995 45542 2367
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCC----C-----CCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNR----K-----IPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 225 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~----~-----~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~- 225 (956)
|+.++++|+|+|+|+++.+.. +...+.. + .+......+.+++...+++|||++|||.++.|+.++|..
T Consensus 223 A~~l~~aGad~I~V~g~GGt~--~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalG 300 (365)
T 3sr7_A 223 IQTAIDLGVKTVDISGRGGTS--FAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLG 300 (365)
T ss_dssp HHHHHHHTCCEEECCCBC----------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEeCCCCcc--cchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 899999999999997653210 0000000 0 111223566666554446999999999999999999998
Q ss_pred cCEEEEccccc
Q psy2378 226 IDGVMLGREAY 236 (956)
Q Consensus 226 ad~VmiGR~~l 236 (956)
||+||+||+++
T Consensus 301 AdaV~ig~~~l 311 (365)
T 3sr7_A 301 AKAVGLSRTML 311 (365)
T ss_dssp CSEEEESHHHH
T ss_pred CCEEEECHHHH
Confidence 99999999554
No 77
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.48 E-value=2.5e-13 Score=155.37 Aligned_cols=201 Identities=12% Similarity=0.129 Sum_probs=140.1
Q ss_pred ccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEeccccccccc---CCchhc-------------------cc----
Q psy2378 5 NSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL---GNKKHC-------------------LD---- 58 (956)
Q Consensus 5 ~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~---~~~~~~-------------------~~---- 58 (956)
...+ ++||++|||+++++..++..+.+.|+.+++.. ..+.+.+. .....+ ..
T Consensus 38 g~~l-~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~-~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~ 115 (404)
T 1eep_A 38 NISL-NIPFLSSAMDTVTESQMAIAIAKEGGIGIIHK-NMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQH 115 (404)
T ss_dssp SCEE-SSSEEECCCTTTCSHHHHHHHHHHTSEEEECS-SSCHHHHHHHHHHHHTCC------------------------
T ss_pred Cccc-CCCEEeCCCCCCCCHHHHHHHHHCCCEEEECC-CCCHHHHHHHHHHHHhhccCCCceeccccccccccccccCCC
Confidence 3455 78999999999999999988888887666653 33333332 000000 00
Q ss_pred --------------cCC-------CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCCh
Q psy2378 59 --------------FNA-------EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKP 117 (956)
Q Consensus 59 --------------~~~-------~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~ 117 (956)
..| ...++++.+.. +++ +.+.++.+.++|+|+|+||+++ | +|
T Consensus 116 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~-~~~-~~~~a~~~~~~G~d~i~i~~~~----------g-----~~ 178 (404)
T 1eep_A 116 LEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSI-DID-TIERVEELVKAHVDILVIDSAH----------G-----HS 178 (404)
T ss_dssp --------------CCTTCCBCTTSCBCCEEEECS-CTT-HHHHHHHHHHTTCSEEEECCSC----------C-----SS
T ss_pred CCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCC-Chh-HHHHHHHHHHCCCCEEEEeCCC----------C-----Ch
Confidence 001 01246777765 333 4556667788999999999764 1 47
Q ss_pred HHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccc------ccccccCCCCCCCCCCcC
Q psy2378 118 LLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHAR------NAFLKKLNPKQNRKIPIL 190 (956)
Q Consensus 118 ~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r------~~~~~g~~~~~~~~~~~~ 190 (956)
+.+.++++++++.+ ++||.++--. ..+.++.++++|+|+|.+... +....+. +..
T Consensus 179 ~~~~e~i~~ir~~~~~~pviv~~v~----------~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~--------g~p 240 (404)
T 1eep_A 179 TRIIELIKKIKTKYPNLDLIAGNIV----------TKEAALDLISVGADCLKVGIGPGSICTTRIVAGV--------GVP 240 (404)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEEC----------SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCC--------CCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEcCCC----------cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCC--------Ccc
Confidence 88999999999998 8999884211 136788999999999999321 1100111 123
Q ss_pred cHHHHHHHHH---hCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchH
Q psy2378 191 KYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMS 243 (956)
Q Consensus 191 ~~~~i~~v~~---~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~ 243 (956)
.++.+..+++ .+ ++|||++|||.+++|+.++++. ||+|++||+++..|++..
T Consensus 241 ~~~~l~~v~~~~~~~-~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 241 QITAICDVYEACNNT-NICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp HHHHHHHHHHHHTTS-SCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSS
T ss_pred hHHHHHHHHHHHhhc-CceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCc
Confidence 5666666665 44 7999999999999999999998 999999999999998763
No 78
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.42 E-value=2.3e-13 Score=161.18 Aligned_cols=211 Identities=10% Similarity=0.077 Sum_probs=150.0
Q ss_pred HHcCCCcEEEeccccccccc-C--CchhccccCCCCCCEEEEecCCCHHH---------HHHHHHHHHHcCCCEEEecCC
Q psy2378 31 RQITRYSWLYTEMFTTQAIL-G--NKKHCLDFNAEEHPIAFQVGDNEPKK---------LAKSAKIIQKWGYDEINLNCG 98 (956)
Q Consensus 31 ~~~g~~~l~~tem~~~~~l~-~--~~~~~~~~~~~~~p~~vQl~g~~~~~---------~~~aA~~~~~~G~d~IeiN~g 98 (956)
...|+..+.+.++....... + ...+.+..-....++-+|++|.-.+. ..+.|+.+.++|+|.|.||.+
T Consensus 290 ~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~ 369 (555)
T 1jvn_A 290 YQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTD 369 (555)
T ss_dssp HHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHH
T ss_pred HHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCH
Confidence 34476678888877654422 1 12233333334457779998865432 567777888899999999999
Q ss_pred CCcceeeeCcccccccCChHHHHHHHHHHhh-ccCccEEEE--------------------------------eccCCCC
Q psy2378 99 CPSNRVQNGFFGAILMTKPLLVSDCIKAMRD-SVEIDITVK--------------------------------HRIGIDD 145 (956)
Q Consensus 99 CP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~~~~pv~vK--------------------------------ir~g~~~ 145 (956)
| ..+..+-..++.++.+|+++.++.+..-+ .+-+.+.+| ...||..
T Consensus 370 ~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~ 448 (555)
T 1jvn_A 370 A-VYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRE 448 (555)
T ss_dssp H-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTE
T ss_pred H-hhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEEEecCcc
Confidence 8 33332233455578899999999998742 332223332 2235654
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhh-
Q psy2378 146 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLN- 224 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~- 224 (956)
.... ++.++++.++++|++.|.+|+++. .+.+.+ .||+.++++++.+ ++|||++|||.|++|+.++++
T Consensus 449 ~~~~-~~~e~a~~~~~~Ga~~il~t~~~~--------dG~~~G-~d~~li~~l~~~~-~iPVIasGGi~s~~d~~~~~~~ 517 (555)
T 1jvn_A 449 SRDL-GVWELTRACEALGAGEILLNCIDK--------DGSNSG-YDLELIEHVKDAV-KIPVIASSGAGVPEHFEEAFLK 517 (555)
T ss_dssp EEEE-EHHHHHHHHHHTTCCEEEECCGGG--------TTTCSC-CCHHHHHHHHHHC-SSCEEECSCCCSHHHHHHHHHH
T ss_pred CCCC-CHHHHHHHHHHcCCCEEEEeCCCC--------CCCCCC-CCHHHHHHHHHhC-CccEEEECCCCCHHHHHHHHHh
Confidence 3222 257899999999999999999873 222233 4999999999998 799999999999999999998
Q ss_pred h-cCEEEEccccccCCcchHHHHHhhccCC
Q psy2378 225 Y-IDGVMLGREAYKNPFLMSNFDLNYYSNL 253 (956)
Q Consensus 225 ~-ad~VmiGR~~l~~P~l~~~i~~~~~~~~ 253 (956)
. ||+||+||+++.+||.+.++++.+...+
T Consensus 518 ~G~~gvivg~a~~~~~~~~~e~~~~l~~~g 547 (555)
T 1jvn_A 518 TRADACLGAGMFHRGEFTVNDVKEYLLEHG 547 (555)
T ss_dssp SCCSEEEESHHHHTTSCCHHHHHHHHHHTT
T ss_pred cCChHHHHHHHHHcCCCCHHHHHHHHHHCC
Confidence 4 9999999999999999999998765443
No 79
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.41 E-value=3e-12 Score=143.16 Aligned_cols=199 Identities=16% Similarity=0.215 Sum_probs=138.2
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhcccc-CCCCCCEEEEecCCCHHHHHHHHHHHHHc
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDF-NAEEHPIAFQVGDNEPKKLAKSAKIIQKW 88 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~-~~~~~p~~vQl~g~~~~~~~~aA~~~~~~ 88 (956)
+.||+.|||.++|+..+.....+.||.+++... .+.+.+. ...... .....|+.+++..++ .+.++.+.++
T Consensus 45 ~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~-~s~e~~~---~~I~~vk~~~~~pvga~ig~~~----~e~a~~l~ea 116 (361)
T 3khj_A 45 KIPLISSAMDTVTEHLMAVGMARLGGIGIIHKN-MDMESQV---NEVLKVKNSGGLRVGAAIGVNE----IERAKLLVEA 116 (361)
T ss_dssp SSSEEECSSTTTCSHHHHHHHHHTTCEEEECSS-SCHHHHH---HHHHHHHHTTCCCCEEEECTTC----HHHHHHHHHT
T ss_pred CCCEEeecCCCCCcHHHHHHHHHcCCCeEEecC-CCHHHHH---HHHHHHHhccCceEEEEeCCCH----HHHHHHHHHc
Confidence 669999999999999998755556666666432 2222221 111111 123578999997665 5566677889
Q ss_pred CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEE
Q psy2378 89 GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFI 168 (956)
Q Consensus 89 G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~ 168 (956)
|+|.|.||.+. .+++.+.+.++.+++.+++||.++.-. ..+.++.++++|+|+|.
T Consensus 117 Gad~I~ld~a~---------------G~~~~~~~~i~~i~~~~~~~Vivg~v~----------t~e~A~~l~~aGaD~I~ 171 (361)
T 3khj_A 117 GVDVIVLDSAH---------------GHSLNIIRTLKEIKSKMNIDVIVGNVV----------TEEATKELIENGADGIK 171 (361)
T ss_dssp TCSEEEECCSC---------------CSBHHHHHHHHHHHHHCCCEEEEEEEC----------SHHHHHHHHHTTCSEEE
T ss_pred CcCeEEEeCCC---------------CCcHHHHHHHHHHHHhcCCcEEEccCC----------CHHHHHHHHHcCcCEEE
Confidence 99999999653 146788899999999889999886321 23568899999999999
Q ss_pred EcccccccccCCC-CCCCCCCcCcHHHHHHHHH---hCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchH
Q psy2378 169 VHARNAFLKKLNP-KQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMS 243 (956)
Q Consensus 169 vh~r~~~~~g~~~-~~~~~~~~~~~~~i~~v~~---~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~ 243 (956)
+..... +... +.....+...+..+.++++ .+ ++|||+.|||.+++|+.++++. ||+||+|++++..+....
T Consensus 172 VG~~~G---s~~~tr~~~g~g~p~~~~i~~v~~~~~~~-~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~ 247 (361)
T 3khj_A 172 VGIGPG---SICTTRIVAGVGVPQITAIEKCSSVASKF-GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPG 247 (361)
T ss_dssp ECSSCC---TTCCHHHHTCBCCCHHHHHHHHHHHHHHH-TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSC
T ss_pred EecCCC---cCCCcccccCCCCCcHHHHHHHHHHHhhc-CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCc
Confidence 942211 0000 0000112245666666643 34 6999999999999999999998 999999999999887665
Q ss_pred HH
Q psy2378 244 NF 245 (956)
Q Consensus 244 ~i 245 (956)
+.
T Consensus 248 ~~ 249 (361)
T 3khj_A 248 EK 249 (361)
T ss_dssp EE
T ss_pred ch
Confidence 43
No 80
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.36 E-value=8.3e-12 Score=132.40 Aligned_cols=206 Identities=9% Similarity=0.025 Sum_probs=147.8
Q ss_pred CCCcceeeeeeecccccCC-cchHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHHHHHHHHcccCCC
Q psy2378 624 IPYKVIINEAIELVKSFGN-IDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLFKKN 702 (956)
Q Consensus 624 ~P~c~~~Ce~C~l~k~~~~-~~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll~~i~~~~~~~~~ 702 (956)
+..|+..|.||........ .......+.+++++......++ ..+..+.|.||.|+. .++.+.++++.+++. .
T Consensus 26 t~~Cn~~C~~C~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~-~~~~~i~~~GGEP~l-~~~~l~~l~~~~~~~-----~ 98 (245)
T 3c8f_A 26 FQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMN-ASGGGVTASGGEAIL-QAEFVRDWFRACKKE-----G 98 (245)
T ss_dssp ESCCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHT-STTCEEEEEESCGGG-GHHHHHHHHHHHHTT-----T
T ss_pred eCCCCCCCCCCCCchhcccccCccCCHHHHHHHHHHhhhhhc-CCCCeEEEECCCcCC-CHHHHHHHHHHHHHc-----C
Confidence 4589999999986543221 1111235677777765543221 235678999999986 556678888888764 2
Q ss_pred ceeEEEeCCCCC-CHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCeeEEEEeecCCC--C
Q psy2378 703 ISITLEANPSTF-EIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIYALPN--Q 779 (956)
Q Consensus 703 ~eitle~np~~i-t~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~~~~~i~~dlI~GlPg--q 779 (956)
..+++.+|.... +++.++.|.+. ++++++++||++++.++.+++.. .+++.++++.+++.++.+.+.+++ +|| +
T Consensus 99 ~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~~~-~~~~~~~i~~l~~~g~~v~i~~~~-~~g~~~ 175 (245)
T 3c8f_A 99 IHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVGVS-NHRTLEFAKYLANKNVKVWIRYVV-VPGWSD 175 (245)
T ss_dssp CCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHSSC-SHHHHHHHHHHHHHTCCEEEEEEE-CTTTTC
T ss_pred CcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhccCCC-HHHHHHHHHHHHhcCCEEEEEEee-cCCCCC
Confidence 367888886432 66777777777 89999999999999999996644 589999999999988887777666 666 6
Q ss_pred CHHHHHHHHHHHHccCC-CeEEEEeeeccCCcc---ccc---CCCCCCCCHHHHHHHHHHHHHHHHhcCch
Q psy2378 780 TLSELMLDLNYAIQYSP-PHLSLYSLTIEPNTY---FFK---YPPLSMPSNDENAVMQDKITSLLKNNYYK 843 (956)
Q Consensus 780 T~e~~~~tl~~~~~l~~-~~i~~y~l~~~pgT~---l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 843 (956)
+.+++.+.++++.++++ ..+.+.++.+.+++. +.+ ....+.++.++ +..+.+.+.+.||.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~G~~ 242 (245)
T 3c8f_A 176 DDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKET----MERVKGILEQYGHK 242 (245)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHH----HHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHhcCCCceeEEEeccccChhHHHhhCcccccccCCCCCHHH----HHHHHHHHHhcCCe
Confidence 78999999999999996 888888888877653 222 23344566554 44455667777765
No 81
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=1.4e-12 Score=139.99 Aligned_cols=154 Identities=20% Similarity=0.227 Sum_probs=111.6
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCC-------------
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD------------- 145 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~------------- 145 (956)
++.|+.++++|+++|... ||++...+...|++++++|+.+.+|.+ ++++||+.|.|+||.+
T Consensus 27 ~e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~I 100 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDMI 100 (330)
T ss_dssp HHHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCEE
Confidence 567888889999999443 399999999999999999999888754 5789999999999831
Q ss_pred ----------C-CcH-------------HHHHHHHHHHHHcCCCEEEEcc--------------ccc-------------
Q psy2378 146 ----------I-NSY-------------DFVRDFVGTVSSAGCRTFIVHA--------------RNA------------- 174 (956)
Q Consensus 146 ----------~-~~~-------------~~~~~~a~~l~~~G~~~i~vh~--------------r~~------------- 174 (956)
. ..+ .++.+.++++ ++|+++|.+|+ |+-
T Consensus 101 d~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~ 179 (330)
T 2yzr_A 101 DESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDE 179 (330)
T ss_dssp EEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred ehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHH
Confidence 0 000 1255777777 89999999998 440
Q ss_pred -ccc-----c--C----------CCCCCCC--CC------------cCcHHHHHHHHHhCCCceE--EEecCCCCHHHHH
Q psy2378 175 -FLK-----K--L----------NPKQNRK--IP------------ILKYNFVYNLKKDFPELEI--IINGGIKTKKEID 220 (956)
Q Consensus 175 -~~~-----g--~----------~~~~~~~--~~------------~~~~~~i~~v~~~~~~ipV--i~nGgI~s~~da~ 220 (956)
.+. | + .|..++. .+ +..++.++++++.. ++|| |++|||.|++++.
T Consensus 180 El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~-~IPVV~VAeGGI~Tpeda~ 258 (330)
T 2yzr_A 180 EVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG-RLPVVNFAAGGVATPADAA 258 (330)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT-SCSSEEEECSCCCSHHHHH
T ss_pred HHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC-CCCeEEEEECCCCCHHHHH
Confidence 000 0 0 1111110 00 11238899999877 7998 6999999999999
Q ss_pred HHhhh-cCEEEEcccccc--CCc
Q psy2378 221 LHLNY-IDGVMLGREAYK--NPF 240 (956)
Q Consensus 221 ~~l~~-ad~VmiGR~~l~--~P~ 240 (956)
++++. ||+|++||+++. ||.
T Consensus 259 ~~l~~GaDgV~VGsaI~~a~dP~ 281 (330)
T 2yzr_A 259 LMMQLGSDGVFVGSGIFKSENPL 281 (330)
T ss_dssp HHHHTTCSCEEESHHHHTSSCHH
T ss_pred HHHHcCcCEEeeHHHHhcCCCHH
Confidence 99998 999999999994 554
No 82
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.35 E-value=7.1e-12 Score=138.94 Aligned_cols=200 Identities=14% Similarity=0.117 Sum_probs=137.8
Q ss_pred cccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCCHHHHHHHHH
Q psy2378 4 INSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAK 83 (956)
Q Consensus 4 ~~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~ 83 (956)
.+..+ +.||++|||.++|+..++..+.+.|+.+ +++.+.+.+.+... . ......+.+.+ | +++...+.++
T Consensus 37 ~g~~l-~~Pii~ApM~~vte~~lA~A~a~~Gg~g-vi~~~~s~ee~~~~---i---~~~~~~~~~~~-g-~~~~~~e~~~ 106 (361)
T 3r2g_A 37 GKLTL-NLPVISANMDTITESNMANFMHSKGAMG-ALHRFMTIEENIQE---F---KKCKGPVFVSV-G-CTENELQRAE 106 (361)
T ss_dssp SSCEE-SSCEEECCSTTTCSHHHHHHHHHTTCEE-BCCSCSCHHHHHHH---H---HTCCSCCBEEE-C-SSHHHHHHHH
T ss_pred CCEEc-CCCEEECCCCCchHHHHHHHHHHcCCCE-EEeCCCCHHHHHHH---H---hhcceEEEEEc-C-CCHHHHHHHH
Confidence 34455 7799999999999999999999998753 33444444443210 0 00112233333 2 4456777888
Q ss_pred HHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHc
Q psy2378 84 IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSA 162 (956)
Q Consensus 84 ~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~ 162 (956)
++.++|+|.|.|+..+.. ++.+.++++.+|+.+ ++||.+|--. ..+.|+.++++
T Consensus 107 ~a~~aGvdvI~id~a~G~---------------~~~~~e~I~~ir~~~~~~~Vi~G~V~----------T~e~A~~a~~a 161 (361)
T 3r2g_A 107 ALRDAGADFFCVDVAHAH---------------AKYVGKTLKSLRQLLGSRCIMAGNVA----------TYAGADYLASC 161 (361)
T ss_dssp HHHHTTCCEEEEECSCCS---------------SHHHHHHHHHHHHHHTTCEEEEEEEC----------SHHHHHHHHHT
T ss_pred HHHHcCCCEEEEeCCCCC---------------cHhHHHHHHHHHHhcCCCeEEEcCcC----------CHHHHHHHHHc
Confidence 999999999999865431 346778999999987 7899987221 13568899999
Q ss_pred CCCEEEEcccccccccCCCC--CCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 163 GCRTFIVHARNAFLKKLNPK--QNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 163 G~~~i~vh~r~~~~~g~~~~--~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
|+|+|.|.... |.... .....+...+..+.++++.. . |||+.|||.+++|+.++|+. ||+||+||++++..
T Consensus 162 GaD~I~Vg~g~----G~~~~tr~~~g~g~p~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~ 235 (361)
T 3r2g_A 162 GADIIKAGIGG----GSVCSTRIKTGFGVPMLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSA 235 (361)
T ss_dssp TCSEEEECCSS----SSCHHHHHHHCCCCCHHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBT
T ss_pred CCCEEEEcCCC----CcCccccccCCccHHHHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 99999984211 00000 00001123677788877665 3 99999999999999999998 99999999999987
Q ss_pred cchHH
Q psy2378 240 FLMSN 244 (956)
Q Consensus 240 ~l~~~ 244 (956)
....+
T Consensus 236 Espg~ 240 (361)
T 3r2g_A 236 PTPGE 240 (361)
T ss_dssp TSSSC
T ss_pred cCCce
Confidence 65443
No 83
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.1e-12 Score=140.43 Aligned_cols=194 Identities=13% Similarity=0.103 Sum_probs=133.4
Q ss_pred cCCHHHH--HHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCC
Q psy2378 21 LTDRHCR--MFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCG 98 (956)
Q Consensus 21 ~td~~fR--~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~g 98 (956)
+++.|.. ......| ++.++.-++++ .+. ..+..-....++-+|++|.-.. . ++.+.+ +|+|.|-
T Consensus 36 ~~~dp~~~A~~~~~~G-a~~l~vvDL~~----~n~-~~i~~i~~~~~~pv~vgGGir~-~-~~~~~l--~Ga~~Vi---- 101 (260)
T 2agk_A 36 SQHPSSYYAKLYKDRD-VQGCHVIKLGP----NND-DAAREALQESPQFLQVGGGIND-T-NCLEWL--KWASKVI---- 101 (260)
T ss_dssp -CCCHHHHHHHHHHTT-CTTCEEEEESS----SCH-HHHHHHHHHSTTTSEEESSCCT-T-THHHHT--TTCSCEE----
T ss_pred cCCCHHHHHHHHHHcC-CCEEEEEeCCC----CCH-HHHHHHHhcCCceEEEeCCCCH-H-HHHHHh--cCCCEEE----
Confidence 3344443 3456666 56666655554 111 1111111223566888887764 3 666666 8999775
Q ss_pred CCcceeeeCcccccccCC-----hHHHHHHHHHHh-hccCccEEEEec---------cCCCCCCcHHHHH-HHHHHHHHc
Q psy2378 99 CPSNRVQNGFFGAILMTK-----PLLVSDCIKAMR-DSVEIDITVKHR---------IGIDDINSYDFVR-DFVGTVSSA 162 (956)
Q Consensus 99 CP~~~~~~~~~G~~l~~~-----~~~~~eiv~~v~-~~~~~pv~vKir---------~g~~~~~~~~~~~-~~a~~l~~~ 162 (956)
.|++++++ |+++.++++++. +.+-+++.+|++ .||...... +.. ++++.++++
T Consensus 102 ----------igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~-~~~~e~a~~~~~~ 170 (260)
T 2agk_A 102 ----------VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDL-ELNADTFRELRKY 170 (260)
T ss_dssp ----------ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEE-EESHHHHHHHTTT
T ss_pred ----------ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCc-cHHHHHHHHHHHh
Confidence 46778888 999999999997 555555655533 256543211 245 899999999
Q ss_pred CCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC---CceEEEecCCCCHHHHHHHhhh---cCEEEEcccc-
Q psy2378 163 GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP---ELEIIINGGIKTKKEIDLHLNY---IDGVMLGREA- 235 (956)
Q Consensus 163 G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~---~ipVi~nGgI~s~~da~~~l~~---ad~VmiGR~~- 235 (956)
++.|.+|.++. .+.+.++ ||+.++++++.+| ++|||++|||.|++|+.++++. ||+||+||++
T Consensus 171 -a~~il~t~i~~--------dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~ 240 (260)
T 2agk_A 171 -TNEFLIHAADV--------EGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLD 240 (260)
T ss_dssp -CSEEEEEC---------------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBG
T ss_pred -cCEEEEEeecc--------ccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHH
Confidence 99999999884 2233344 9999999999874 6999999999999999999964 9999999997
Q ss_pred -ccCC-cchHHHHHhh
Q psy2378 236 -YKNP-FLMSNFDLNY 249 (956)
Q Consensus 236 -l~~P-~l~~~i~~~~ 249 (956)
+.+| |.+.++++.+
T Consensus 241 l~~g~~~~~~~~~~~~ 256 (260)
T 2agk_A 241 IFGGNLVKFEDCCRWN 256 (260)
T ss_dssp GGTCSSBCHHHHHHHH
T ss_pred HcCCCCCCHHHHHHHH
Confidence 9999 9999988643
No 84
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.33 E-value=6e-12 Score=134.02 Aligned_cols=156 Identities=15% Similarity=0.298 Sum_probs=121.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc----Ccc----
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV----EID---- 134 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~----~~p---- 134 (956)
+.|+.+-.+=.+|++ ++.+.++|+|+|-+ |+.++.+|+++.++++.....+ +.+
T Consensus 74 ~ipv~v~ggi~~~~~----~~~~l~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~ 135 (244)
T 2y88_A 74 DVQVELSGGIRDDES----LAAALATGCARVNV--------------GTAALENPQWCARVIGEHGDQVAVGLDVQIIDG 135 (244)
T ss_dssp SSEEEEESSCCSHHH----HHHHHHTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCcEEEECCCCCHHH----HHHHHHcCCCEEEE--------------CchHhhChHHHHHHHHHcCCCEEEEEeccccCC
Confidence 567777666677876 33444579999977 4556788999999999876443 222
Q ss_pred -EEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCC
Q psy2378 135 -ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 213 (956)
Q Consensus 135 -v~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI 213 (956)
.+||+| ||.+... +..++++.+++.|++.|.+|+|+. .+.+.+ .+|+.++++++.+ ++|||++|||
T Consensus 136 ~~~v~~~-g~~~~~~--~~~e~~~~~~~~G~~~i~~~~~~~--------~~~~~g-~~~~~~~~l~~~~-~ipvia~GGI 202 (244)
T 2y88_A 136 EHRLRGR-GWETDGG--DLWDVLERLDSEGCSRFVVTDITK--------DGTLGG-PNLDLLAGVADRT-DAPVIASGGV 202 (244)
T ss_dssp EEEEEEG-GGTEEEE--EHHHHHHHHHHTTCCCEEEEETTT--------TTTTSC-CCHHHHHHHHTTC-SSCEEEESCC
T ss_pred CCEEEEC-CccCCCC--CHHHHHHHHHhCCCCEEEEEecCC--------ccccCC-CCHHHHHHHHHhC-CCCEEEECCC
Confidence 367888 8865332 367889999999999999999873 111222 4899999999886 8999999999
Q ss_pred CCHHHHHHHhh----hcCEEEEccccccCCcchHHHHHhh
Q psy2378 214 KTKKEIDLHLN----YIDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 214 ~s~~da~~~l~----~ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
.+++++.++++ .||+||+||+++.+||.+.++++.+
T Consensus 203 ~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~~~~ 242 (244)
T 2y88_A 203 SSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAV 242 (244)
T ss_dssp CSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHT
T ss_pred CCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHHHHh
Confidence 99999999986 4999999999999999999988743
No 85
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.29 E-value=7.3e-12 Score=130.30 Aligned_cols=146 Identities=18% Similarity=0.220 Sum_probs=107.9
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHH
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGT 158 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~ 158 (956)
.+.|++++++|+.+|-..-+||.... .. .|.+-+++|+.+ ++|++++++||.-|.|.|. + .=|+.
T Consensus 21 ~eqa~iae~aGa~av~~l~~~p~d~r-~~-gGv~Rm~dp~~I----~~I~~aVsIPVm~k~righ--------~-~EAqi 85 (291)
T 3o07_A 21 PEQAKIAEKSGACAVMALESIPADMR-KS-GKVCRMSDPKMI----KDIMNSVSIPVMAKVRIGH--------F-VEAQI 85 (291)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHH-TT-TCCCCCCCHHHH----HHHHTTCSSCEEEEEETTC--------H-HHHHH
T ss_pred HHHHHHHHHhCchhhhhccCCCchhh-hc-CCccccCCHHHH----HHHHHhCCCCeEEEEecCc--------H-HHHHH
Confidence 45678889999999999999997654 33 378889999875 5557788999999999975 1 23677
Q ss_pred HHHcCCCEEEEccc-----------------------------------------cc-----------------------
Q psy2378 159 VSSAGCRTFIVHAR-----------------------------------------NA----------------------- 174 (956)
Q Consensus 159 l~~~G~~~i~vh~r-----------------------------------------~~----------------------- 174 (956)
|+++|+|+|.-+-+ |.
T Consensus 86 lea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~ 165 (291)
T 3o07_A 86 IEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIK 165 (291)
T ss_dssp HHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHH
Confidence 88888888853211 00
Q ss_pred ccccC-CCCCC--C-CCCcCcHHHHHHHHHhCCCceE--EEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 175 FLKKL-NPKQN--R-KIPILKYNFVYNLKKDFPELEI--IINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 175 ~~~g~-~~~~~--~-~~~~~~~~~i~~v~~~~~~ipV--i~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
.++|+ +.... . ..-.++|+.++++++.. ++|| |+||||.|++++.++++. ||+||+|||++..|+
T Consensus 166 ~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~-~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~D 237 (291)
T 3o07_A 166 ACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG-KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSN 237 (291)
T ss_dssp HHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT-SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred HHHcCCCHHHhhhcccccCCCHHHHHHHHHcc-CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCC
Confidence 01122 11000 0 01147899999999986 7998 579999999999999977 999999999998444
No 86
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.29 E-value=1.3e-11 Score=138.34 Aligned_cols=158 Identities=11% Similarity=0.096 Sum_probs=121.8
Q ss_pred ceeEEEe-cCCCCCCCCHHHHHHHHHHHHHHcccCCCceeEEEeCCCCCCHHHHHHHHHcC--CCeEEecCCCCCHHHHH
Q psy2378 667 KIHTIFI-GGGTPSLISDTGLDYLLKNIKKLLLFKKNISITLEANPSTFEIEKFHSYSIIG--INRLSIGIQSFNNKYLN 743 (956)
Q Consensus 667 ~i~~i~f-gggtPs~L~~~~l~~ll~~i~~~~~~~~~~eitle~np~~it~e~L~~L~~~G--v~risiGvQS~~d~~L~ 743 (956)
.+..+.| +||.|+..+ .+.++++.+++. ...+++.+|... ++.++.|.++| +.++++++++.+++.++
T Consensus 141 ~~~~v~~sggGEPll~~--~l~~ll~~~~~~-----g~~i~l~TNG~~--~e~l~~L~~~g~~~~~l~isld~~~~e~~~ 211 (342)
T 2yx0_A 141 NPTHAAISLSGEPMLYP--YMGDLVEEFHKR-----GFTTFIVTNGTI--PERLEEMIKEDKLPTQLYVSITAPDIETYN 211 (342)
T ss_dssp SCCEEEECSSSCGGGST--THHHHHHHHHHT-----TCEEEEEECSCC--HHHHHHHHHTTCCCSEEEEEECCSSHHHHH
T ss_pred CCCEEEEcCCCcccchh--hHHHHHHHHHHC-----CCcEEEEcCCCc--HHHHHHHHhcCCCCCEEEEEccCCCHHHHH
Confidence 3577888 599998764 588888888764 247888888765 88899999987 99999999999999999
Q ss_pred HhCC---CCCHHHHHHHHHHHHhcCCeeEEEEeecCCCCCHHHHHHHHHHHHccCCCeEEEEeeeccCCcccccCCCCCC
Q psy2378 744 ILGR---THDSKQAKYAIEIAKQYFNNFNLDLIYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSM 820 (956)
Q Consensus 744 ~~~R---~~~~~~~~~ai~~l~~~~~~i~~dlI~GlPgqT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~~~~~~ 820 (956)
.++| ..+.+++.++++.+++.+..+.+.+++ +||++.+++.+.++++.+++++++++.+|.+.++++ ........
T Consensus 212 ~i~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~l-~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~~~~~~~-~~l~~~~~ 289 (342)
T 2yx0_A 212 SVNIPMIPDGWERILRFLELMRDLPTRTVVRLTL-VKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSR-NRLTINNM 289 (342)
T ss_dssp HHHCBSSSCHHHHHHHHHHHHTTCSSEEEEEEEE-CTTTTCCCHHHHHHHHHHHCCSEEEEEECC-------CCCCGGGS
T ss_pred HHhCCCcccHHHHHHHHHHHHHhCCCCEEEEEEE-ECCccHHHHHHHHHHHHHcCCCEEEEEeeeecCCCc-ccccccCC
Confidence 9987 467899999999999988888888888 799988889999999999999999988888766654 22222335
Q ss_pred CCHHHHHHHHHHHHH
Q psy2378 821 PSNDENAVMQDKITS 835 (956)
Q Consensus 821 ~~~~~~~~~~~~~~~ 835 (956)
++.++..+.+..+.+
T Consensus 290 ~~~e~~~~~~~~l~~ 304 (342)
T 2yx0_A 290 PSHQDIREFAEALVK 304 (342)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH
Confidence 666665555554433
No 87
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.29 E-value=5.4e-11 Score=131.30 Aligned_cols=204 Identities=11% Similarity=0.148 Sum_probs=140.7
Q ss_pred ccCCCceEEccCcCcC------CHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEec-CCCHHHHH
Q psy2378 7 KYNKRKISIAPMMNLT------DRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVG-DNEPKKLA 79 (956)
Q Consensus 7 ~~~~~~i~lAPM~~~t------d~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~-g~~~~~~~ 79 (956)
+| .-|+++||++... +...-+-|.+.| . ..+....+...+ +++... ..+.|...||. -.|.+...
T Consensus 67 ~~-~~P~~iaP~g~~~l~~~~ge~~~araa~~~g-i-~~~lSt~ss~s~----e~v~~~-~~~~~~wfQlY~~~d~~~~~ 138 (352)
T 3sgz_A 67 EI-SAPICISPTAFHSIAWPDGEKSTARAAQEAN-I-CYVISSYASYSL----EDIVAA-APEGFRWFQLYMKSDWDFNK 138 (352)
T ss_dssp EE-SSSEEECCCSCGGGTCTTHHHHHHHHHHHHT-C-EEEECTTCSSCH----HHHHHH-STTCEEEEECCCCSCHHHHH
T ss_pred cc-CCcceechHHHHHhcCccHHHHHHHHHHHcC-C-CeEeCCCCCCCH----HHHHHh-ccCccceeccccCCCHHHHH
Confidence 45 6799999986632 334444556666 2 222222222222 222222 23568899997 45788888
Q ss_pred HHHHHHHHcCCCEEEecCCCCcceee-eC---c-------------------cccc---ccCChHHHHHHHHHHhhccCc
Q psy2378 80 KSAKIIQKWGYDEINLNCGCPSNRVQ-NG---F-------------------FGAI---LMTKPLLVSDCIKAMRDSVEI 133 (956)
Q Consensus 80 ~aA~~~~~~G~d~IeiN~gCP~~~~~-~~---~-------------------~G~~---l~~~~~~~~eiv~~v~~~~~~ 133 (956)
+..++++++||.+|=+..=.|..-.| ++ + .++. -.-||.+.-+.++.+++.+++
T Consensus 139 ~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~ 218 (352)
T 3sgz_A 139 QMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRL 218 (352)
T ss_dssp HHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCC
Confidence 88899999999998886655543111 00 0 0111 123677778899999999999
Q ss_pred cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecC
Q psy2378 134 DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGG 212 (956)
Q Consensus 134 pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGg 212 (956)
||.+|.... .+.|+.++++|+|+|+|+++.+ .+....+..|+.+.++++.+. ++|||++||
T Consensus 219 PvivK~v~~----------~e~A~~a~~~GaD~I~vsn~GG--------~~~d~~~~~~~~L~~i~~av~~~ipVia~GG 280 (352)
T 3sgz_A 219 PIILKGILT----------KEDAELAMKHNVQGIVVSNHGG--------RQLDEVSASIDALREVVAAVKGKIEVYMDGG 280 (352)
T ss_dssp CEEEEEECS----------HHHHHHHHHTTCSEEEECCGGG--------TSSCSSCCHHHHHHHHHHHHTTSSEEEEESS
T ss_pred CEEEEecCc----------HHHHHHHHHcCCCEEEEeCCCC--------CccCCCccHHHHHHHHHHHhCCCCeEEEECC
Confidence 999997632 3568999999999999965432 111224578999999988763 599999999
Q ss_pred CCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
|.+++|+.++|.. ||+||+||+++
T Consensus 281 I~~g~Dv~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 281 VRTGTDVLKALALGARCIFLGRPIL 305 (352)
T ss_dssp CCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECHHHH
Confidence 9999999999998 99999999655
No 88
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=2e-11 Score=139.17 Aligned_cols=206 Identities=12% Similarity=0.099 Sum_probs=137.4
Q ss_pred ccccCCCceEEccCcCcCCHHHHHHHHHcCCCcEEEeccccccccc-CC--------ch---------h----c------
Q psy2378 5 NSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-GN--------KK---------H----C------ 56 (956)
Q Consensus 5 ~~~~~~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~-~~--------~~---------~----~------ 56 (956)
+..+ ++|+++|||+++++..+...+.+.|+.+++.|||+..+... .. .. . +
T Consensus 63 g~~l-~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~ 141 (393)
T 2qr6_A 63 AYKF-DLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDT 141 (393)
T ss_dssp TEEE-SSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCH
T ss_pred cccc-CCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCH
Confidence 3456 88999999999999999988888998999999874332111 00 00 0 0
Q ss_pred -------cccCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChH-HHHHHHHHHh
Q psy2378 57 -------LDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPL-LVSDCIKAMR 128 (956)
Q Consensus 57 -------~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~-~~~eiv~~v~ 128 (956)
-...+.+.|+++.+.+.+..++ ++.+.++|+|.|.+| +.|.. .++++ +. ...+ +..++
T Consensus 142 ~~~~~~i~~~~~~g~~v~~~v~~~~~~e~---a~~~~~agad~i~i~-~~~~~----~~~~~-----~~~~~~~-i~~l~ 207 (393)
T 2qr6_A 142 ELLSERIAQVRDSGEIVAVRVSPQNVREI---APIVIKAGADLLVIQ-GTLIS----AEHVN-----TGGEALN-LKEFI 207 (393)
T ss_dssp HHHHHHHHHHHHTTSCCEEEECTTTHHHH---HHHHHHTTCSEEEEE-CSSCC----SSCCC-----C-----C-HHHHH
T ss_pred HHHHHHHHHHhhcCCeEEEEeCCccHHHH---HHHHHHCCCCEEEEe-CCccc----cccCC-----CcccHHH-HHHHH
Confidence 0011236788899887655444 445567899999988 33311 11222 11 1223 56777
Q ss_pred hccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh-------
Q psy2378 129 DSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD------- 201 (956)
Q Consensus 129 ~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~------- 201 (956)
+.+++||.+|- .. + .+-++.+.++|+|+|.| ++.. ..+......++..++.+.++++.
T Consensus 208 ~~~~~pvi~gg---i~---t----~e~a~~~~~~Gad~i~v-g~Gg----~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~ 272 (393)
T 2qr6_A 208 GSLDVPVIAGG---VN---D----YTTALHMMRTGAVGIIV-GGGE----NTNSLALGMEVSMATAIADVAAARRDYLDE 272 (393)
T ss_dssp HHCSSCEEEEC---CC---S----HHHHHHHHTTTCSEEEE-SCCS----CCHHHHTSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEECC---cC---C----HHHHHHHHHcCCCEEEE-CCCc----ccccccCCCCCChHHHHHHHHHHHHHhHhh
Confidence 77899999962 21 1 24578888999999999 4311 01111111234577888777765
Q ss_pred CC--CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 202 FP--ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 202 ~~--~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
+. ++|||++|||.+++|+.+++.. ||+||+||+++..+.
T Consensus 273 ~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 273 TGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred cCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCC
Confidence 42 2999999999999999999988 999999999999886
No 89
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.23 E-value=3.2e-12 Score=136.48 Aligned_cols=156 Identities=17% Similarity=0.233 Sum_probs=33.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHh-hccCccE------
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMR-DSVEIDI------ 135 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~-~~~~~pv------ 135 (956)
..|+++.=+-.+++++.++ .+.|+|+|-| |..++.+|+++.++.+..- +.+-+.+
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~----l~~Gad~V~i--------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~ 140 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEA----FLRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 140 (247)
T ss_dssp CSCEEEESCCCSHHHHHHH----HHTTCSEECC--------------SHHHHHCTHHHHHHHHHHC--------------
T ss_pred CCCEEEeCCCCCHHHHHHH----HHcCCCeeeh--------------hhHHhhChHHHHHHHHHhCCCcEEEEEEeccCC
Confidence 5676664444577764443 3579999865 6777889999999988772 3322222
Q ss_pred ---EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 136 ---TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 136 ---~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.|+++ ||..... .+..++++.+++.|++.|.+|.++. .| .. ...+|+.++++++.+ ++|||++||
T Consensus 141 ~~~~v~~~-g~~~~~~-~~~~~~a~~~~~~G~~~i~~t~~~~--~g------~~-~g~~~~~~~~i~~~~-~iPvia~GG 208 (247)
T 3tdn_A 141 GEFMVFTY-SGKKNTG-ILLRDWVVEVEKRGAGEILLTSIDR--DG------TK-SGYDTEMIRFVRPLT-TLPIIASGG 208 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEC-CCcccCC-CCHHHHHHHHHhcCCCEEEEecccC--CC------Cc-CCCCHHHHHHHHHhC-CCCEEEECC
Confidence 34554 6665322 2467899999999999999998753 11 11 125889999999887 799999999
Q ss_pred CCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHh
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
|.|++|+.++++. ||+|++||+++.+||+++++++.
T Consensus 209 I~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 209 AGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp -------------------------------------
T ss_pred CCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHHh
Confidence 9999999999998 99999999999999999998864
No 90
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.20 E-value=7.9e-11 Score=131.39 Aligned_cols=199 Identities=12% Similarity=0.134 Sum_probs=129.6
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEec-CCCHHHHHHHHHHHHHc
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVG-DNEPKKLAKSAKIIQKW 88 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~-g~~~~~~~~aA~~~~~~ 88 (956)
+-||+.|||.++|+..+..-+...||.+++-..| +.+.+. ..+..... ..++.+.+. |.+ .++.+.++.+.++
T Consensus 46 ~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~-s~e~~~---~~i~~vk~-~~~l~vga~vg~~-~~~~~~~~~liea 119 (366)
T 4fo4_A 46 NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNM-SIEQQA---AQVHQVKI-SGGLRVGAAVGAA-PGNEERVKALVEA 119 (366)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSS-CHHHHH---HHHHHHHT-TTSCCCEEECCSC-TTCHHHHHHHHHT
T ss_pred CCCEEeCCCCCCChHHHHHHHHHcCCceEeecCC-CHHHHH---HHHHHHHh-cCceeEEEEeccC-hhHHHHHHHHHhC
Confidence 5699999999999998886666677655443222 222221 11111111 123334443 222 3455667778889
Q ss_pred CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEE
Q psy2378 89 GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTF 167 (956)
Q Consensus 89 G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i 167 (956)
|+|.|.||... | +++.+.+.++.+++.. ++||.+..-. ..+.++.++++|+|+|
T Consensus 120 Gvd~I~idta~----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v~----------t~e~A~~a~~aGAD~I 174 (366)
T 4fo4_A 120 GVDVLLIDSSH----------G-----HSEGVLQRIRETRAAYPHLEIIGGNVA----------TAEGARALIEAGVSAV 174 (366)
T ss_dssp TCSEEEEECSC----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEEC----------SHHHHHHHHHHTCSEE
T ss_pred CCCEEEEeCCC----------C-----CCHHHHHHHHHHHHhcCCCceEeeeeC----------CHHHHHHHHHcCCCEE
Confidence 99999998531 1 3567788899999887 7888774211 2466888999999999
Q ss_pred EEcccccccccC-CCCCCCCCCcCcHHHHHHHHH---hCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcch
Q psy2378 168 IVHARNAFLKKL-NPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 168 ~vh~r~~~~~g~-~~~~~~~~~~~~~~~i~~v~~---~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
.+..... +. +.+.....+...+..+.++++ .+ ++|||+.|||.+++++.++++. ||+||+|+.++.-+.-.
T Consensus 175 ~vG~gpG---s~~~tr~~~g~g~p~~~~l~~v~~~~~~~-~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp 250 (366)
T 4fo4_A 175 KVGIGPG---SICTTRIVTGVGVPQITAIADAAGVANEY-GIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAP 250 (366)
T ss_dssp EECSSCS---TTBCHHHHHCCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSS
T ss_pred EEecCCC---CCCCcccccCcccchHHHHHHHHHHHhhc-CCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCC
Confidence 9921110 00 000000112346777777765 34 7999999999999999999998 99999999999877654
Q ss_pred H
Q psy2378 243 S 243 (956)
Q Consensus 243 ~ 243 (956)
.
T Consensus 251 ~ 251 (366)
T 4fo4_A 251 G 251 (366)
T ss_dssp S
T ss_pred c
Confidence 3
No 91
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.18 E-value=1.8e-10 Score=122.55 Aligned_cols=157 Identities=13% Similarity=0.259 Sum_probs=118.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE----
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK---- 138 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK---- 138 (956)
+.|+++-.+=.+|++ ++.+.++|+|.|-+ |+.++.+|+++.++++.....+.+.++++
T Consensus 75 ~ipv~v~ggI~~~~~----~~~~l~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v 136 (244)
T 1vzw_A 75 DIKVELSGGIRDDDT----LAAALATGCTRVNL--------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGTTL 136 (244)
T ss_dssp SSEEEEESSCCSHHH----HHHHHHTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEE
T ss_pred CCcEEEECCcCCHHH----HHHHHHcCCCEEEE--------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCCEE
Confidence 567776655578876 33444579999876 45567789999999988765554555544
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
.+.||.+... +..++++.+++.|++.|.+|+++.. + .+. ..+|+.++++++.+ ++|||++|||.++++
T Consensus 137 ~~~g~~~~~~--~~~e~~~~~~~~G~~~i~~~~~~~~--~------~~~-g~~~~~~~~i~~~~-~ipvia~GGI~~~~d 204 (244)
T 1vzw_A 137 RGRGWTRDGG--DLYETLDRLNKEGCARYVVTDIAKD--G------TLQ-GPNLELLKNVCAAT-DRPVVASGGVSSLDD 204 (244)
T ss_dssp CCSSSCCCCC--BHHHHHHHHHHTTCCCEEEEEC----------------CCCHHHHHHHHHTC-SSCEEEESCCCSHHH
T ss_pred EEcCcccCCC--CHHHHHHHHHhCCCCEEEEeccCcc--c------ccC-CCCHHHHHHHHHhc-CCCEEEECCCCCHHH
Confidence 2447765432 3578899999999999999987631 1 111 24899999999987 799999999999999
Q ss_pred HHHHhhh----cCEEEEccccccCCcchHHHHHhh
Q psy2378 219 IDLHLNY----IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 219 a~~~l~~----ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
+.++++. ||+|++||+++.+||.+.++.+.+
T Consensus 205 ~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 205 LRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp HHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred HHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHHh
Confidence 9999864 999999999999999998887654
No 92
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.17 E-value=4e-10 Score=126.05 Aligned_cols=178 Identities=11% Similarity=0.114 Sum_probs=136.7
Q ss_pred CCCCcceeeeeeecccc------cCCcc---hHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHHHHH
Q psy2378 623 KIPYKVIINEAIELVKS------FGNID---EKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNI 693 (956)
Q Consensus 623 ~~P~c~~~Ce~C~l~k~------~~~~~---~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll~~i 693 (956)
-+..|+..|.||..... +.... ....+..+++++. + ..+..|.|.||.|+... .+.++++.+
T Consensus 20 ~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~---~----~g~~~i~~tGGEPll~~--~l~~li~~~ 90 (340)
T 1tv8_A 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYA---E----LGVKKIRITGGEPLMRR--DLDVLIAKL 90 (340)
T ss_dssp CCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHH---H----TTCCEEEEESSCGGGST--THHHHHHHH
T ss_pred eCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHH---H----CCCCEEEEeCCCccchh--hHHHHHHHH
Confidence 35789999999975441 11111 2222333343332 1 23567899999998764 356677776
Q ss_pred HHHcccCCCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCC-CHHHHHHHHHHHHhcCCeeEEEE
Q psy2378 694 KKLLLFKKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTH-DSKQAKYAIEIAKQYFNNFNLDL 772 (956)
Q Consensus 694 ~~~~~~~~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~-~~~~~~~ai~~l~~~~~~i~~dl 772 (956)
++.. ....+++.+|...++ +.++.|+++|+.+|.++++|.+++.++.+++.. +.+++.++++.+++.++.+.+.+
T Consensus 91 ~~~~---~~~~i~i~TNG~ll~-~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~ 166 (340)
T 1tv8_A 91 NQID---GIEDIGLTTNGLLLK-KHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNV 166 (340)
T ss_dssp TTCT---TCCEEEEEECSTTHH-HHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhCC---CCCeEEEEeCccchH-HHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 5531 123788888887765 588999999999999999999999999998888 99999999999999988888888
Q ss_pred eecCCCCCHHHHHHHHHHHHccCCCeEEEEeeeccCCcccccC
Q psy2378 773 IYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKY 815 (956)
Q Consensus 773 I~GlPgqT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~ 815 (956)
++ +||++.+++.+.++++.+++++ +.+..+.|.++++.+..
T Consensus 167 vv-~~g~n~~ei~~~~~~~~~~g~~-~~~i~~~p~~~~~~~~~ 207 (340)
T 1tv8_A 167 VI-QKGINDDQIIPMLEYFKDKHIE-IRFIEFMDVGNDNGWDF 207 (340)
T ss_dssp EE-CTTTTGGGHHHHHHHHHHTTCC-EEEEECCCBCSSSSBCC
T ss_pred EE-eCCCCHHHHHHHHHHHHhcCCe-EEEEEeeEcCCCccchh
Confidence 77 8999999999999999999997 77888999998876543
No 93
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.13 E-value=4.5e-10 Score=131.16 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=99.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHH
Q psy2378 78 LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFV 156 (956)
Q Consensus 78 ~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a 156 (956)
..+.|+.+.++|+|.|+||.+|| +.+.+.++++++++.+ ++||.++--. ..+.+
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g---------------~~~~~~~~i~~ir~~~p~~~Vi~g~v~----------t~e~a 286 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGGNVA----------TAEGA 286 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCCEEEEEEC----------SHHHH
T ss_pred hHHHHHHHHhccCceEEeccccc---------------cchHHHHHHHHHHHHCCCceEEEcccC----------cHHHH
Confidence 34555667778999999999986 3567789999999988 7899884221 23668
Q ss_pred HHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC--CceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 157 GTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP--ELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~--~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
+.+.++|+|+|.+....+.. .........+..++..+.++++.+. ++|||++|||.+++|+.++++. ||+||+||
T Consensus 287 ~~l~~aGaD~I~Vg~g~Gs~--~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 287 RALIEAGVSAVKVGIGPGSI--CTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp HHHHHHTCSEEEECSSCCTT--BCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHhCCCEEEECCCCCcC--cccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecH
Confidence 99999999999985221100 0000000122347777777776431 6999999999999999999988 99999999
Q ss_pred ccccCCcc
Q psy2378 234 EAYKNPFL 241 (956)
Q Consensus 234 ~~l~~P~l 241 (956)
.+++-..-
T Consensus 365 ~f~~t~Es 372 (496)
T 4fxs_A 365 MFAGTEEA 372 (496)
T ss_dssp TTTTBTTS
T ss_pred HHhcCCCC
Confidence 99875543
No 94
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.11 E-value=1.2e-09 Score=123.02 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=130.2
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEeccccccccc------C-Cc-----------hhcc--------------
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL------G-NK-----------KHCL-------------- 57 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~------~-~~-----------~~~~-------------- 57 (956)
+-||+.|||.++|+..+---.-+.||.+.+-. ..+.+.+. + .+ ..++
T Consensus 42 ~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~-~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~ 120 (400)
T 3ffs_A 42 KIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNN 120 (400)
T ss_dssp SSSEEECSCTTTCSSHHHHHHHTTTCEEEECS-SSCHHHHHHHHHHHHCCC-----------------------------
T ss_pred CCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCC-CCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHH
Confidence 66999999999999998876667777666543 22222221 0 00 0000
Q ss_pred -ccCC------CCC-CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhh
Q psy2378 58 -DFNA------EEH-PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRD 129 (956)
Q Consensus 58 -~~~~------~~~-p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~ 129 (956)
...| .++ .+.+-+...+ .+.++.+.++|+|.|.|+.+. | +++.+.++++.+++
T Consensus 121 ~~~~p~~~~d~~g~l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~----------G-----~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 121 IDAYSNENLDNKGRLRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAH----------G-----HSLNIIRTLKEIKS 181 (400)
T ss_dssp --CCTTCCBCTTSSBCCEEEECCC-----CHHHHHHHHHTCSEEEECCSC----------C-----SBHHHHHHHHHHHT
T ss_pred hhhCcchhhccccceeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCC----------C-----CcccHHHHHHHHHh
Confidence 0000 111 1233333332 455667778899999987531 1 46677889999999
Q ss_pred ccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC--CCceE
Q psy2378 130 SVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF--PELEI 207 (956)
Q Consensus 130 ~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~--~~ipV 207 (956)
.+++||.++.-. ..+.|+.++++|+|+|.+..... ..+ +.+.....+...+..+.++++.+ .++||
T Consensus 182 ~~~i~Vi~g~V~----------t~e~A~~a~~aGAD~I~vG~g~G-s~~-~tr~~~g~g~p~~~al~~v~~~~~~~~IPV 249 (400)
T 3ffs_A 182 KMNIDVIVGNVV----------TEEATKELIENGADGIKVGIGPG-SIC-TTRIVAGVGVPQITAIEKCSSVASKFGIPI 249 (400)
T ss_dssp TCCCEEEEEEEC----------SHHHHHHHHHTTCSEEEECC-----------CCSCBCCCHHHHHHHHHHHHTTTTCCE
T ss_pred cCCCeEEEeecC----------CHHHHHHHHHcCCCEEEEeCCCC-cCc-ccccccccchhHHHHHHHHHHHHHhcCCCE
Confidence 889999886221 24678899999999999942110 000 00111112234778888887642 27999
Q ss_pred EEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchH
Q psy2378 208 IINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMS 243 (956)
Q Consensus 208 i~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~ 243 (956)
|+.|||.+++|+.++++. ||+||+|+.++.-+.-..
T Consensus 250 IA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~ 286 (400)
T 3ffs_A 250 IADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPG 286 (400)
T ss_dssp EEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSC
T ss_pred EecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCc
Confidence 999999999999999998 999999999998776543
No 95
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.10 E-value=1e-09 Score=128.13 Aligned_cols=138 Identities=10% Similarity=0.124 Sum_probs=100.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHH
Q psy2378 78 LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFV 156 (956)
Q Consensus 78 ~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a 156 (956)
..+.|+.+.++|+|.|+||.+|+. +..+.++++.+++.+ ++||.++--. ..+.+
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v~----------t~e~a 284 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNIA----------TAEAA 284 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEEC----------SHHHH
T ss_pred hHHHHHHHhhcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeeeC----------cHHHH
Confidence 344555677789999999998862 567789999999988 7899885221 23668
Q ss_pred HHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC--CCceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 157 GTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF--PELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~--~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
+.+.++|+|+|.|..+..... ........+..++..+.++++.+ .++|||+.|||.+++|+.++++. ||+||+|+
T Consensus 285 ~~l~~aGaD~I~vg~g~Gs~~--~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs 362 (490)
T 4avf_A 285 KALAEAGADAVKVGIGPGSIC--TTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGS 362 (490)
T ss_dssp HHHHHTTCSEEEECSSCSTTC--HHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHcCCCEEEECCCCCcCC--CccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecH
Confidence 999999999999832110000 00000112235788888887743 16999999999999999999998 99999999
Q ss_pred ccccCCcch
Q psy2378 234 EAYKNPFLM 242 (956)
Q Consensus 234 ~~l~~P~l~ 242 (956)
+++.-+.-.
T Consensus 363 ~~~~~~Esp 371 (490)
T 4avf_A 363 MFAGTEEAP 371 (490)
T ss_dssp TTTTBTTSS
T ss_pred HHhcCCCCC
Confidence 998866544
No 96
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.10 E-value=5.9e-10 Score=126.68 Aligned_cols=149 Identities=10% Similarity=0.042 Sum_probs=127.1
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccC
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 142 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 142 (956)
-|+...+.+.++++|+++|+++.++||++|+||+|| ++++..+++++||+++ ++|+.++...+
T Consensus 137 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~ 200 (384)
T 2pgw_A 137 VGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANEG 200 (384)
T ss_dssp EEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTTC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 344455667899999999999999999999999885 6899999999999999 57788877777
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+. ++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++++.+.++++++++
T Consensus 201 ~~~----~~a~~~~~~l~~~~i~~iEq--------P--------~~~~~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~~ 259 (384)
T 2pgw_A 201 WSV----HDAINMCRKLEKYDIEFIEQ--------P--------TVSWSIPAMAHVREKV-GIPIVADQAAFTLYDVYEI 259 (384)
T ss_dssp CCH----HHHHHHHHHHGGGCCSEEEC--------C--------SCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHH
T ss_pred CCH----HHHHHHHHHHHhcCCCEEeC--------C--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHH
Confidence 753 56889999999999999851 1 1346999999999998 7999999999999999999
Q ss_pred hhh--cCEEEEccccccCCcchHHHHHhh
Q psy2378 223 LNY--IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 223 l~~--ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
++. ||+|++..+.++.++-+.++.+..
T Consensus 260 i~~~~~d~v~ik~~~~GGit~~~~i~~~A 288 (384)
T 2pgw_A 260 CRQRAADMICIGPREIGGIQPMMKAAAVA 288 (384)
T ss_dssp HHTTCCSEEEECHHHHTSHHHHHHHHHHH
T ss_pred HHcCCCCEEEEcchhhCCHHHHHHHHHHH
Confidence 987 999999999999999888877644
No 97
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.07 E-value=1.2e-09 Score=116.78 Aligned_cols=160 Identities=10% Similarity=0.112 Sum_probs=118.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhh-c--cCccE----
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRD-S--VEIDI---- 135 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~--~~~pv---- 135 (956)
+.|+++.=+=+++++..+ +.++|+|+|=+ |..++.+|+.+.++.+.... . +++++
T Consensus 75 ~iPvi~~Ggi~~~~~~~~----~~~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDARK----LLLSGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWRG 136 (252)
T ss_dssp CSCEEEESSCCSHHHHHH----HHHHTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCEEEECCcCCHHHHHH----HHHcCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCC
Confidence 567777544456665433 33469999976 56677889999999888752 2 23332
Q ss_pred ---EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 136 ---TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 136 ---~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.|++ .||.+... .+..+.++.+++.|++.|.+|.++. .+.+. ..+|+.++++++.+ ++|||++||
T Consensus 137 g~~~v~~-~g~~~~~~-~~~~e~~~~~~~~G~~~i~~~~~~~--------~g~~~-g~~~~~i~~l~~~~-~ipvia~GG 204 (252)
T 1ka9_F 137 DFPEVHV-AGGRVPTG-LHAVEWAVKGVELGAGEILLTSMDR--------DGTKE-GYDLRLTRMVAEAV-GVPVIASGG 204 (252)
T ss_dssp TEEEEEE-TTTTEEEE-EEHHHHHHHHHHHTCCEEEEEETTT--------TTTCS-CCCHHHHHHHHHHC-SSCEEEESC
T ss_pred CCEEEEE-CCCccccC-CcHHHHHHHHHHcCCCEEEEecccC--------CCCcC-CCCHHHHHHHHHHc-CCCEEEeCC
Confidence 3444 36654221 1256889999999999999996652 11122 24899999999988 799999999
Q ss_pred CCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhccC
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSN 252 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~~~ 252 (956)
|.+++|+.++++. ||+|++|++++.+||-+.++++.+...
T Consensus 205 I~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~ 245 (252)
T 1ka9_F 205 AGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEK 245 (252)
T ss_dssp CCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 9999999999976 999999999999999999988766443
No 98
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.06 E-value=1.1e-09 Score=117.14 Aligned_cols=160 Identities=13% Similarity=0.148 Sum_probs=117.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhh-ccCccE------
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRD-SVEIDI------ 135 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~-~~~~pv------ 135 (956)
+.|+++--+=.++++. ..+.++|+|+|=+ |..++.+|+.+.++++.... .+.+.+
T Consensus 74 ~ipvi~~ggI~~~~~~----~~~~~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~ 135 (253)
T 1thf_D 74 DIPFTVGGGIHDFETA----SELILRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 135 (253)
T ss_dssp CSCEEEESSCCSHHHH----HHHHHTTCSEEEE--------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCEEEeCCCCCHHHH----HHHHHcCCCEEEE--------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccC
Confidence 5677766555677663 3344579999966 56677889999999888753 222333
Q ss_pred ---EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 136 ---TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 136 ---~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.|++ .||.+... .+..++++.+++.|++.|.+|.++. ...+. ..+|+.++++++.+ ++|||++||
T Consensus 136 g~~~v~~-~g~~~~~~-~~~~e~~~~~~~~G~~~i~~~~~~~--------~g~~~-g~~~~~~~~l~~~~-~ipvia~GG 203 (253)
T 1thf_D 136 GEFMVFT-YSGKKNTG-ILLRDWVVEVEKRGAGEILLTSIDR--------DGTKS-GYDTEMIRFVRPLT-TLPIIASGG 203 (253)
T ss_dssp TEEEEEE-TTTTEEEE-EEHHHHHHHHHHTTCSEEEEEETTT--------TTSCS-CCCHHHHHHHGGGC-CSCEEEESC
T ss_pred CcEEEEE-CCCccccC-CCHHHHHHHHHHCCCCEEEEEeccC--------CCCCC-CCCHHHHHHHHHhc-CCCEEEECC
Confidence 3444 35654221 1256889999999999999997652 11112 24899999999887 799999999
Q ss_pred CCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhccC
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSN 252 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~~~ 252 (956)
|.+++++.++++. ||+|++|++++.+||-+.+..+.+...
T Consensus 204 I~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 204 AGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKH 244 (253)
T ss_dssp CCSHHHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHHc
Confidence 9999999999977 999999999999998888887766443
No 99
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.05 E-value=6e-10 Score=118.29 Aligned_cols=189 Identities=11% Similarity=0.117 Sum_probs=125.3
Q ss_pred HHHHcCCCcEEEecccccccccC-CchhccccCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeC
Q psy2378 29 FHRQITRYSWLYTEMFTTQAILG-NKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNG 107 (956)
Q Consensus 29 ~~~~~g~~~l~~tem~~~~~l~~-~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~ 107 (956)
.....|...+.++++..+....+ ....+..+...+.|+++.=+=+++++..+ +.++|+|+|-+
T Consensus 38 ~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~----~~~~Gad~V~l------------ 101 (241)
T 1qo2_A 38 KLIEEGFTLIHVVDLSNAIENSGENLPVLEKLSEFAEHIQIGGGIRSLDYAEK----LRKLGYRRQIV------------ 101 (241)
T ss_dssp HHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGGGGGGGEEEESSCCSHHHHHH----HHHTTCCEEEE------------
T ss_pred HHHHcCCCEEEEecccccccCCchhHHHHHHHHhcCCcEEEECCCCCHHHHHH----HHHCCCCEEEE------------
Confidence 34566754577777654322222 11111122212345443322345554444 33479998844
Q ss_pred cccccccCChHHHHHHHHHHhhccCccEE-----EEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCC
Q psy2378 108 FFGAILMTKPLLVSDCIKAMRDSVEIDIT-----VKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPK 182 (956)
Q Consensus 108 ~~G~~l~~~~~~~~eiv~~v~~~~~~pv~-----vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~ 182 (956)
|..++.+|+++.++ +...+.+-+.++ |++ .||.+.... ...++++.+++.|++.|.+|.++. .|
T Consensus 102 --g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~-~g~~~~~~~-~~~e~~~~~~~~G~~~i~~t~~~~--~g---- 170 (241)
T 1qo2_A 102 --SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF-KGWLAEEEI-DPVSLLKRLKEYGLEEIVHTEIEK--DG---- 170 (241)
T ss_dssp --CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC-TTCSSCSCC-CHHHHHHHHHTTTCCEEEEEETTH--HH----
T ss_pred --CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE-CCceecCCC-CHHHHHHHHHhCCCCEEEEEeecc--cc----
Confidence 66778899988888 776533323333 344 477654321 256889999999999999998753 11
Q ss_pred CCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-------cCEEEEccccccCCcchHHHHHh
Q psy2378 183 QNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-------IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 183 ~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-------ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
.+. ..+|+.++++++.+ ++|||++|||.+++|+.++++. ||+|++|++++..+.-+.++++.
T Consensus 171 --~~~-g~~~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 171 --TLQ-EHDFSLTKKIAIEA-EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp --HTC-CCCHHHHHHHHHHH-TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred --cCC-cCCHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 111 24899999999987 7999999999999999999875 99999999999999988887764
No 100
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.05 E-value=1.6e-09 Score=116.83 Aligned_cols=192 Identities=14% Similarity=0.067 Sum_probs=112.6
Q ss_pred HHHHcCCCcEEEecccccccccCC-chhcccc-CCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeee
Q psy2378 29 FHRQITRYSWLYTEMFTTQAILGN-KKHCLDF-NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQN 106 (956)
Q Consensus 29 ~~~~~g~~~l~~tem~~~~~l~~~-~~~~~~~-~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~ 106 (956)
.....|...+.+|++..+....+. ...+..+ ...+.|+++.=+-++++++.++. ++|+|+|=+.
T Consensus 38 ~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~----~~Gad~v~lg---------- 103 (266)
T 2w6r_A 38 EVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF----LAGADKALAA---------- 103 (266)
T ss_dssp HHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHH----HHTCSEEECC----------
T ss_pred HHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH----HcCCcHhhhh----------
Confidence 345667544666765433211121 1111112 22356777754446677755443 4699988773
Q ss_pred Cccccccc-C--ChHHHHHHHHHHh---hcc--CccE-------EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcc
Q psy2378 107 GFFGAILM-T--KPLLVSDCIKAMR---DSV--EIDI-------TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHA 171 (956)
Q Consensus 107 ~~~G~~l~-~--~~~~~~eiv~~v~---~~~--~~pv-------~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~ 171 (956)
..++ . +|+.+.++++... +.+ ++++ .|+++ ||...... ...++++.+++.|++.|.+|.
T Consensus 104 ----~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~-g~~~~~~~-~~~e~~~~~~~~G~~~i~~t~ 177 (266)
T 2w6r_A 104 ----SVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTH-SGKKNTGI-LLRDWVVEVEKRGAGEILLTS 177 (266)
T ss_dssp ----CCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEET-TTTEEEEE-EHHHHHHHHHHTTCSEEEEEE
T ss_pred ----HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEEC-CCceecch-hHHHHHHHHHHcCCCEEEEEe
Confidence 3444 4 7888888877654 222 3333 34553 56432111 246888999999999999987
Q ss_pred cccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhc
Q psy2378 172 RNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYY 250 (956)
Q Consensus 172 r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~ 250 (956)
++. .| .+. ..+|+.++++++.+ ++|||++|||.+++|+.++++. ||+|++|++++.+||.+.++++.+.
T Consensus 178 ~~~--~g------~~~-g~~~~~i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~ 247 (266)
T 2w6r_A 178 IDR--DG------TKS-GYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDMRELKEYLK 247 (266)
T ss_dssp TTT--TT------TCS-CCCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--------------
T ss_pred ecC--CC------CcC-CCCHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCHHHHHHHHH
Confidence 652 11 111 24899999999987 8999999999999999999987 9999999999999999998887554
No 101
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.04 E-value=1.2e-09 Score=118.24 Aligned_cols=200 Identities=12% Similarity=0.109 Sum_probs=132.3
Q ss_pred CCceEEccCcCcCCHH-HHHHHHHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCCC-----H--HHHHHH
Q psy2378 10 KRKISIAPMMNLTDRH-CRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNE-----P--KKLAKS 81 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~-fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~-----~--~~~~~a 81 (956)
++++.++||.+.++.. .-..+.++| ++.+++.. .++....+. .....|+++|+.+.. + +.+.+.
T Consensus 33 d~~~~l~p~~~~~~~~~~~~~~~~~g-~~~i~~~~----~~~~~~~~~---~~~~~~~~v~~~~~~~~~~d~~~~~~~~~ 104 (273)
T 2qjg_A 33 DHGVSNGPIKGLIDIRKTVNDVAEGG-ANAVLLHK----GIVRHGHRG---YGKDVGLIIHLSGGTAISPNPLKKVIVTT 104 (273)
T ss_dssp CHHHHHCSCTTSSSHHHHHHHHHHHT-CSEEEECH----HHHHSCCCS---SSCCCEEEEECEECCTTSSSTTCCEECSC
T ss_pred ccccccCCCcchhhHHHHHHHHHhcC-CCEEEeCH----HHHHHHHHh---hcCCCCEEEEEcCCCcCCCCcccchHHHH
Confidence 5566789999998875 222335777 46666543 222111111 123578999997655 2 223556
Q ss_pred HHHHHHcCCCEE--EecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc-CCC--CCCcHHHHHHHH
Q psy2378 82 AKIIQKWGYDEI--NLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI-GID--DINSYDFVRDFV 156 (956)
Q Consensus 82 A~~~~~~G~d~I--eiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-g~~--~~~~~~~~~~~a 156 (956)
++.+.++|+|.| .+|.+|+. ...+ .+.+.++++..++ .++|+.+.+-. |+. ...+..+..+++
T Consensus 105 v~~a~~~Ga~~v~~~l~~~~~~--------~~~~---~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~~~~~~~~~a 172 (273)
T 2qjg_A 105 VEEAIRMGADAVSIHVNVGSDE--------DWEA---YRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNERDPELVAHAA 172 (273)
T ss_dssp HHHHHHTTCSEEEEEEEETSTT--------HHHH---HHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTTCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEecCCCC--------HHHH---HHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCCCHhHHHHHH
Confidence 667788999999 77888761 1111 1344555555543 48899887621 221 111223455667
Q ss_pred HHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCC--HHHHHHHh----hh-cCEE
Q psy2378 157 GTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT--KKEIDLHL----NY-IDGV 229 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s--~~da~~~l----~~-ad~V 229 (956)
+.++++|+|+|.++. +.+|+.++++++.+ ++||++.|||.+ .+++.+++ +. |++|
T Consensus 173 ~~a~~~Gad~i~~~~-----------------~~~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv 234 (273)
T 2qjg_A 173 RLGAELGADIVKTSY-----------------TGDIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGV 234 (273)
T ss_dssp HHHHHTTCSEEEECC-----------------CSSHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHcCCCEEEECC-----------------CCCHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 899999999998872 15899999999888 799999999994 88855544 45 9999
Q ss_pred EEccccccCCcchHHHHH
Q psy2378 230 MLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 230 miGR~~l~~P~l~~~i~~ 247 (956)
++||+++..||....+++
T Consensus 235 ~vg~~i~~~~~~~~~~~~ 252 (273)
T 2qjg_A 235 AVGRNIFQHDDVVGITRA 252 (273)
T ss_dssp ECCHHHHTSSSHHHHHHH
T ss_pred EeeHHhhCCCCHHHHHHH
Confidence 999999999998766554
No 102
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.01 E-value=1.9e-09 Score=114.94 Aligned_cols=192 Identities=10% Similarity=0.061 Sum_probs=130.4
Q ss_pred HHHHcCCCcEEEecccccccccCC-chhcccc-CCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeee
Q psy2378 29 FHRQITRYSWLYTEMFTTQAILGN-KKHCLDF-NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQN 106 (956)
Q Consensus 29 ~~~~~g~~~l~~tem~~~~~l~~~-~~~~~~~-~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~ 106 (956)
.+...|...+.++++.....-.+. ...+..+ ...+.|+++.-+-.+++++ +.+.++|+|+|.+|.
T Consensus 41 ~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~----~~~~~~Gad~V~i~~--------- 107 (253)
T 1h5y_A 41 RYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDA----TTLFRAGADKVSVNT--------- 107 (253)
T ss_dssp HHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHH----HHHHHHTCSEEEESH---------
T ss_pred HHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHH----HHHHHcCCCEEEECh---------
Confidence 345666433778776543211110 1111111 1125788877666778765 334457999999973
Q ss_pred CcccccccCChHHHHHHHHHHhh-cc----Cc-----cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccccc
Q psy2378 107 GFFGAILMTKPLLVSDCIKAMRD-SV----EI-----DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFL 176 (956)
Q Consensus 107 ~~~G~~l~~~~~~~~eiv~~v~~-~~----~~-----pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~ 176 (956)
.++.+|+.+.++.+.... .+ +. ++.|+++.+++... .+..+.++.+++.|++.|.+|+++.
T Consensus 108 -----~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~--~~~~e~~~~~~~~G~d~i~~~~~~~-- 178 (253)
T 1h5y_A 108 -----AAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATG--LDAVKWAKEVEELGAGEILLTSIDR-- 178 (253)
T ss_dssp -----HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEE--EEHHHHHHHHHHHTCSEEEEEETTT--
T ss_pred -----HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCC--CCHHHHHHHHHhCCCCEEEEecccC--
Confidence 356778888888877542 11 22 25788887654322 1256788999999999999998763
Q ss_pred ccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhc
Q psy2378 177 KKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYY 250 (956)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~ 250 (956)
.| .. ...+|+.++++++.+ ++||+++|||.+++++.++++. ||+|++|++++.+++-+.++.+.+.
T Consensus 179 ~g------~~-~~~~~~~i~~l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~ 245 (253)
T 1h5y_A 179 DG------TG-LGYDVELIRRVADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLK 245 (253)
T ss_dssp TT------TC-SCCCHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred CC------Cc-CcCCHHHHHHHHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHH
Confidence 11 11 124899999999987 7999999999999999999987 9999999999999887777776553
No 103
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.98 E-value=2.8e-09 Score=125.74 Aligned_cols=144 Identities=13% Similarity=0.112 Sum_probs=106.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 150 (956)
|.+++ ..+.|+.+.++|+|+|+||.+|. +++...++++++++.+ ++||.+|-- .
T Consensus 251 G~~~~-~~~~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~v------~--- 305 (514)
T 1jcn_A 251 GTRED-DKYRLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGNV------V--- 305 (514)
T ss_dssp CSSTT-HHHHHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEEE------C---
T ss_pred cCchh-hHHHHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEeccc------c---
Confidence 44444 34556667889999999998763 2467889999999998 899988621 1
Q ss_pred HHHHHHHHHHHcCCCEEEEcc--c-ccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-c
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHA--R-NAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-I 226 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~--r-~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-a 226 (956)
..+.|+.++++|+|+|.+.. + +.+.....+ .....+..+..+.++++.+ ++|||++|||.+++|+.++++. |
T Consensus 306 -t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~--~g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GA 381 (514)
T 1jcn_A 306 -TAAQAKNLIDAGVDGLRVGMGCGSICITQEVMA--CGRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGA 381 (514)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCS--CCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTC
T ss_pred -hHHHHHHHHHcCCCEEEECCCCCcccccccccC--CCccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCC
Confidence 24668999999999999932 1 100000000 0001134678888998887 7999999999999999999998 9
Q ss_pred CEEEEccccccCCcchHH
Q psy2378 227 DGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 227 d~VmiGR~~l~~P~l~~~ 244 (956)
|+||+||+++++|+.+..
T Consensus 382 d~V~iG~~~l~~~e~~~~ 399 (514)
T 1jcn_A 382 STVMMGSLLAATTEAPGE 399 (514)
T ss_dssp SEEEESTTTTTSTTSSCC
T ss_pred CeeeECHHHHcCCcCCcc
Confidence 999999999999987644
No 104
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.98 E-value=3.9e-09 Score=110.57 Aligned_cols=162 Identities=10% Similarity=0.135 Sum_probs=113.3
Q ss_pred CEEEEecCC----CHHHHHHHHHHHHHcCCCEEEec-----------CCCCcceeeeCc--------------------c
Q psy2378 65 PIAFQVGDN----EPKKLAKSAKIIQKWGYDEINLN-----------CGCPSNRVQNGF--------------------F 109 (956)
Q Consensus 65 p~~vQl~g~----~~~~~~~aA~~~~~~G~d~IeiN-----------~gCP~~~~~~~~--------------------~ 109 (956)
-+.+|+.+. +++...+.|+.+.++|+++|.++ .++|.-+..+.. .
T Consensus 8 ~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 8 IVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp EEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 367899988 77899999999999999999986 568874332221 1
Q ss_pred cccc-------cCCh-HHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCC
Q psy2378 110 GAIL-------MTKP-LLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLN 180 (956)
Q Consensus 110 G~~l-------~~~~-~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~ 180 (956)
|+.. ..+| ..+.++++.+++.+ +.++.+.+. + .+-++.+++.|+|+|.+.... ++
T Consensus 88 Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~-------t----~~e~~~~~~~G~d~i~~~~~g-----~t 151 (223)
T 1y0e_A 88 QCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA-------T----VEEAKNAARLGFDYIGTTLHG-----YT 151 (223)
T ss_dssp TCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS-------S----HHHHHHHHHTTCSEEECTTTT-----SS
T ss_pred CCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC-------C----HHHHHHHHHcCCCEEEeCCCc-----Cc
Confidence 2221 1134 35567888888766 566655432 1 123567899999999764321 11
Q ss_pred CCC-CCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHH
Q psy2378 181 PKQ-NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 181 ~~~-~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~ 244 (956)
+.. .....+.+|+.++++++.+ ++||+++|||.|++++.++++. ||+|++||+++. |+...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~-p~~~~~ 215 (223)
T 1y0e_A 152 SYTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR-PKEITK 215 (223)
T ss_dssp TTSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC-HHHHHH
T ss_pred CCCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC-cHHHHH
Confidence 111 1111235789999999988 7999999999999999999988 999999999665 776544
No 105
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.97 E-value=1e-08 Score=114.30 Aligned_cols=197 Identities=13% Similarity=0.104 Sum_probs=125.0
Q ss_pred CCceEEccCcCcCCHHHHHHHHHcCCCcEEEecccccccccCCchhccccCCCC-CCEEEEecCCCHHHHHHHHHHHHH-
Q psy2378 10 KRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEE-HPIAFQVGDNEPKKLAKSAKIIQK- 87 (956)
Q Consensus 10 ~~~i~lAPM~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~-~p~~vQl~g~~~~~~~~aA~~~~~- 87 (956)
+.||+.|||++.++..+-.-+.+.|+.+.+-..| +.+.... .+.-.+.. .++.+.+ |.+++.+..+...++.
T Consensus 57 ~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~-s~e~~~~----~i~~~p~~l~~v~~~~-g~~~~~~~~~~~l~~~~ 130 (351)
T 2c6q_A 57 GVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHY-SLVQWQE----FAGQNPDCLEHLAASS-GTGSSDFEQLEQILEAI 130 (351)
T ss_dssp ECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTC-CHHHHHH----HHHHCGGGCTTEEEEE-CSSHHHHHHHHHHHHHC
T ss_pred cCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCC-CHHHHHH----HHhhCchhhheeEeec-CCChHHHHHHHHHHhcc
Confidence 6799999999999988877667777544433222 1111111 00001111 2466666 5567666655444432
Q ss_pred cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCE
Q psy2378 88 WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRT 166 (956)
Q Consensus 88 ~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~ 166 (956)
.|+|.|+++..- | ++..+.+.++.+|+.+ ++||.+|.-. ..+-|+.+.++|+|+
T Consensus 131 ~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~----------t~e~A~~a~~aGaD~ 185 (351)
T 2c6q_A 131 PQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNVV----------TGEMVEELILSGADI 185 (351)
T ss_dssp TTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEEC----------SHHHHHHHHHTTCSE
T ss_pred CCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeCC----------CHHHHHHHHHhCCCE
Confidence 389999887521 2 4566788999999998 8999887422 135688999999999
Q ss_pred EEEcccccccccCCCCCCCCCCcCcHHHHHHH---HHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 167 FIVHARNAFLKKLNPKQNRKIPILKYNFVYNL---KKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 167 i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v---~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
|.|....... ..+......+......+.++ ++.. ++|||+.|||.++.|+.++|+. ||+|++||.++.-+.
T Consensus 186 I~v~~g~G~~--~~~r~~~g~~~p~~~~l~~v~~~~~~~-~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~E 260 (351)
T 2c6q_A 186 IKVGIGPGSV--CTTRKKTGVGYPQLSAVMECADAAHGL-KGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSE 260 (351)
T ss_dssp EEECSSCSTT--BCHHHHHCBCCCHHHHHHHHHHHHHHT-TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred EEECCCCCcC--cCccccCCCCccHHHHHHHHHHHHhhc-CCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCcc
Confidence 9885321000 00000000011234444444 4444 6999999999999999999998 999999999987544
No 106
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=98.91 E-value=7.9e-09 Score=116.33 Aligned_cols=151 Identities=10% Similarity=0.008 Sum_probs=125.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
.-|+-.++.-.++++++++|+++.+.||+.|+||+||+ +++...+++++||+++ ++|+.++..
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34554453336899999999999999999999999882 5788899999999998 588999888
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. ++++++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++++.+.++++++
T Consensus 198 ~~~~~----~~a~~~~~~l~~~~i~~iE---------------~P-~~~~~~~~~~~l~~~~-~iPI~~de~~~~~~~~~ 256 (359)
T 1mdl_A 198 QSLDV----PAAIKRSQALQQEGVTWIE---------------EP-TLQHDYEGHQRIQSKL-NVPVQMGENWLGPEEMF 256 (359)
T ss_dssp TCSCH----HHHHHHHHHHHHHTCSCEE---------------CC-SCTTCHHHHHHHHHTC-SSCEEECTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHHHhCCCeEE---------------CC-CChhhHHHHHHHHHhC-CCCEEeCCCCCCHHHHH
Confidence 88863 5688999999999999873 11 1346899999999988 79999999999999999
Q ss_pred HHhhh--cCEEEEccccccCCcchHHHHHhh
Q psy2378 221 LHLNY--IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 221 ~~l~~--ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
++++. ||+|++-.+-++.++-+.++.+..
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A 287 (359)
T 1mdl_A 257 KALSIGACRLAMPDAMKIGGVTGWIRASALA 287 (359)
T ss_dssp HHHHTTCCSEECCBTTTTTHHHHHHHHHHHH
T ss_pred HHHHcCCCCEEeecchhhCCHHHHHHHHHHH
Confidence 99987 999999998888888777776544
No 107
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.87 E-value=1e-08 Score=115.84 Aligned_cols=140 Identities=9% Similarity=-0.023 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
++++++++|+++.+.||+.|+|++||+ +++...+++++||+++ ++++.++...+|+. ++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~----~~ 206 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTV----DG 206 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HH
Confidence 899999999999999999999999984 4788899999999998 58899998888863 46
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 229 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~V 229 (956)
++++++.|++.|+++|. + . .++.+|+..+++++.+ ++||++++.+.++++++++++. ||+|
T Consensus 207 a~~~~~~l~~~~i~~iE--------q-------P-~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v 269 (371)
T 2ovl_A 207 AIRAARALAPFDLHWIE--------E-------P-TIPDDLVGNARIVRES-GHTIAGGENLHTLYDFHNAVRAGSLTLP 269 (371)
T ss_dssp HHHHHHHHGGGCCSEEE--------C-------C-SCTTCHHHHHHHHHHH-CSCEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred HHHHHHHHHhcCCCEEE--------C-------C-CCcccHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 88999999999999883 1 1 1346899999999987 7999999999999999999987 9999
Q ss_pred EEccccccCCcchHHHHHhh
Q psy2378 230 MLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 230 miGR~~l~~P~l~~~i~~~~ 249 (956)
++-.+-++.++-+.++.+..
T Consensus 270 ~ik~~~~GGi~~~~~i~~~A 289 (371)
T 2ovl_A 270 EPDVSNIGGYTTFRKVAALA 289 (371)
T ss_dssp CCCTTTTTSHHHHHHHHHHH
T ss_pred eeCccccCCHHHHHHHHHHH
Confidence 99999999998888877644
No 108
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.87 E-value=1.3e-08 Score=115.41 Aligned_cols=146 Identities=8% Similarity=-0.035 Sum_probs=122.2
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEecc
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI 141 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 141 (956)
-|+...+...++++++++|+++.++||++|+|++|+ ++++..+++++||+++ ++|+.++...
T Consensus 135 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 135 APMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 344444544789999999999999999999999886 4788999999999998 4889988887
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~ 221 (956)
+|+. ++++++++.|++.|+ +|. +.. + +|+..+++++.+ ++||++++.+.+++++++
T Consensus 199 ~~~~----~~a~~~~~~l~~~~i-~iE---------------~P~--~-~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~ 254 (379)
T 2rdx_A 199 GWRV----DNAIRLARATRDLDY-ILE---------------QPC--R-SYEECQQVRRVA-DQPMKLDECVTGLHMAQR 254 (379)
T ss_dssp CSCH----HHHHHHHHHTTTSCC-EEE---------------CCS--S-SHHHHHHHHTTC-CSCEEECTTCCSHHHHHH
T ss_pred CCCH----HHHHHHHHHHHhCCe-EEe---------------CCc--C-CHHHHHHHHhhC-CCCEEEeCCcCCHHHHHH
Confidence 7753 568899999999999 872 111 2 899999999988 799999999999999999
Q ss_pred Hhhh--cCEEEEccccccCCcchHHHHHhh
Q psy2378 222 HLNY--IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 222 ~l~~--ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
+++. ||+|++-.+.++.++-+.++.+..
T Consensus 255 ~i~~~~~d~v~ik~~~~GGit~~~~i~~~A 284 (379)
T 2rdx_A 255 IVADRGAEICCLKISNLGGLSKARRTRDFL 284 (379)
T ss_dssp HHHHTCCSEEEEETTTTTSHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEeccccCCHHHHHHHHHHH
Confidence 9987 999999998888888777766533
No 109
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.86 E-value=7.4e-09 Score=113.72 Aligned_cols=170 Identities=19% Similarity=0.230 Sum_probs=103.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCC
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 143 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 143 (956)
.+++++. +|. +.|+.+.++|+|+|.+. ||.+...+...|+.++++++.+.+| ++.+++|+.+|+|.++
T Consensus 22 ~g~i~~~---~~~---~~a~~~~~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I----~~~~~iPv~~k~r~g~ 89 (305)
T 2nv1_A 22 GGVIMDV---INA---EQAKIAEEAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEV----MNAVSIPVMAKARIGH 89 (305)
T ss_dssp TCEEEEE---SSH---HHHHHHHHTTCSEEEEC--CC-------CCCCCCCCCHHHHHHH----HHHCSSCEEEEECTTC
T ss_pred CCeeecC---CHH---HHHHHHHHcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHH----HHhCCCCEEecccccc
Confidence 3465533 454 45666777999999544 3776666666777788888776665 4557899999999854
Q ss_pred CC---------------------CC---cH-------------HHHHHHHHHHHHcCCCEEEEccccc------------
Q psy2378 144 DD---------------------IN---SY-------------DFVRDFVGTVSSAGCRTFIVHARNA------------ 174 (956)
Q Consensus 144 ~~---------------------~~---~~-------------~~~~~~a~~l~~~G~~~i~vh~r~~------------ 174 (956)
.+ .+ .. .+..+..+. .+.|+|+|.++|-..
T Consensus 90 ~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a-~~~Gad~V~~~G~~g~g~~~~~~~h~r 168 (305)
T 2nv1_A 90 IVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRR-IAEGASMLRTKGEPGTGNIVEAVRHMR 168 (305)
T ss_dssp HHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHH-HHTTCSEEEECCCTTSCCTHHHHHHHH
T ss_pred hHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHH-HHCCCCEEEeccccCccchHHHHhhhh
Confidence 10 00 00 001222333 356777776643100
Q ss_pred -------ccccCCCCCCCC----CCcCcHHHHHHHHHhCCCceEE--EecCCCCHHHHHHHhhh-cCEEEEcccccc--C
Q psy2378 175 -------FLKKLNPKQNRK----IPILKYNFVYNLKKDFPELEII--INGGIKTKKEIDLHLNY-IDGVMLGREAYK--N 238 (956)
Q Consensus 175 -------~~~g~~~~~~~~----~~~~~~~~i~~v~~~~~~ipVi--~nGgI~s~~da~~~l~~-ad~VmiGR~~l~--~ 238 (956)
...|.++. +.+ ..+.++++++++++.+ ++||+ ++|||.|++++.++++. ||+|++||+++. |
T Consensus 169 t~~~~i~~l~gi~~~-~~~~~~~~~~~~~~~i~~i~~~~-~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~ 246 (305)
T 2nv1_A 169 KVNAQVRKVVAMSED-ELMTEAKNLGAPYELLLQIKKDG-KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDN 246 (305)
T ss_dssp HHHHHHHHHHHSCGG-GHHHHHHHHTCCHHHHHHHHHHT-SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred hhhccchhhccccch-hhhcccccccccHHHHHHHHHhc-CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCC
Confidence 00111111 111 0346889999999886 79999 99999999999999987 999999999996 4
Q ss_pred Cc-chHHHHHh
Q psy2378 239 PF-LMSNFDLN 248 (956)
Q Consensus 239 P~-l~~~i~~~ 248 (956)
|+ ..+++.+.
T Consensus 247 p~~~~~~l~~~ 257 (305)
T 2nv1_A 247 PAKFAKAIVEA 257 (305)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 53 34444443
No 110
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.85 E-value=3.1e-09 Score=113.21 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=84.8
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCC
Q psy2378 135 ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK 214 (956)
Q Consensus 135 v~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~ 214 (956)
+.||+|.+++... .+..++++.++++|+++|+++..+... ...+.+++.++++++.+ ++||+++|||.
T Consensus 22 ~~v~~~~~~~~~~--~~~~~~a~~~~~~G~~~i~v~d~~~~~---------~~~~~~~~~i~~i~~~~-~ipvi~~Ggi~ 89 (247)
T 3tdn_A 22 FMVFTYSGKKNTG--ILLRDWVVEVEKRGAGEILLTSIDRDG---------TKSGYDTEMIRFVRPLT-TLPIIASGGAG 89 (247)
T ss_dssp EEEEETTTTEEEE--EEHHHHHHHHHHTTCSEEEEEETTTTT---------CSSCCCHHHHHHHGGGC-CSCEEEESCCC
T ss_pred EEEEEcCCeecCC--CCHHHHHHHHHHcCCCEEEEEecCccc---------CCCcccHHHHHHHHHhC-CCCEEEeCCCC
Confidence 6788885543322 136799999999999999998765210 11246899999999988 89999999999
Q ss_pred CHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 215 TKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 215 s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
|+++++++++. ||+|++||+++.||+++.++.+.+
T Consensus 90 ~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~ 125 (247)
T 3tdn_A 90 KMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTF 125 (247)
T ss_dssp SHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHh
Confidence 99999999988 999999999999999999988754
No 111
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.82 E-value=4e-08 Score=102.86 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=77.9
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEE--cccccccccCCCCCCCCCCcCcHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV--HARNAFLKKLNPKQNRKIPILKYN 193 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~v--h~r~~~~~g~~~~~~~~~~~~~~~ 193 (956)
+|+.+.++++.+++. +.++.+.+. ..+.++.++++|+|+|.+ ++.+. .. .....+|+
T Consensus 114 ~p~~l~~~i~~~~~~-g~~v~~~v~-----------t~eea~~a~~~Gad~Ig~~~~g~t~-------~~--~~~~~~~~ 172 (229)
T 3q58_A 114 RPVDIDSLLTRIRLH-GLLAMADCS-----------TVNEGISCHQKGIEFIGTTLSGYTG-------PI--TPVEPDLA 172 (229)
T ss_dssp CSSCHHHHHHHHHHT-TCEEEEECS-----------SHHHHHHHHHTTCSEEECTTTTSSS-------SC--CCSSCCHH
T ss_pred ChHHHHHHHHHHHHC-CCEEEEecC-----------CHHHHHHHHhCCCCEEEecCccCCC-------CC--cCCCCCHH
Confidence 566677777777754 666666432 135678899999999965 34331 11 12346899
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHH
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~ 244 (956)
.+.++++. ++|||++|||.|++|+.++++. ||+|++|.++. +||.+.+
T Consensus 173 li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~-~p~~~~~ 221 (229)
T 3q58_A 173 MVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAIT-RIEHICQ 221 (229)
T ss_dssp HHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH-CHHHHHH
T ss_pred HHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhc-ChHHHHH
Confidence 99999875 7999999999999999999998 99999996555 6875543
No 112
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.82 E-value=2.1e-08 Score=105.86 Aligned_cols=158 Identities=15% Similarity=0.155 Sum_probs=109.6
Q ss_pred CCCCCEEEEecCCC----HH--HHHHHHHHHHHcCCCEEEec-----------CCCCcceeeeC----------------
Q psy2378 61 AEEHPIAFQVGDNE----PK--KLAKSAKIIQKWGYDEINLN-----------CGCPSNRVQNG---------------- 107 (956)
Q Consensus 61 ~~~~p~~vQl~g~~----~~--~~~~aA~~~~~~G~d~IeiN-----------~gCP~~~~~~~---------------- 107 (956)
..+-++++|....+ ++ .+.+.|+.+.++|+++|.++ .++|.-.+.++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i 94 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEV 94 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEESHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHH
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecCCHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHH
Confidence 45556666766654 66 77788888888888888887 45665222111
Q ss_pred ----ccccccc-------CCh--HHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEE--EEcc
Q psy2378 108 ----FFGAILM-------TKP--LLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTF--IVHA 171 (956)
Q Consensus 108 ----~~G~~l~-------~~~--~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i--~vh~ 171 (956)
..|+... .+| ..+.++++.+++.. +.++.+.++. .+-++.+.++|+|+| ++++
T Consensus 95 ~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----------~~ea~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 95 DQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIST-----------FDEGLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp HHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----------HHHHHHHHHTTCSEEECTTTT
T ss_pred HHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----------HHHHHHHHHcCCCEEeeeccc
Confidence 1233221 233 35678888888776 6666664431 123778889999999 6776
Q ss_pred cccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 172 RNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 172 r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
.+...+ .+ .+.+++.++++++. ++||++.|||+|++++.++++. ||+|++||+++. |+
T Consensus 164 ~~~~~~-------~~-~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~-p~ 222 (234)
T 1yxy_A 164 YTPYSR-------QE-AGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR-PK 222 (234)
T ss_dssp SSTTSC-------CS-SSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC-HH
T ss_pred cCCCCc-------CC-CCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC-hH
Confidence 542111 11 24589999999886 6999999999999999999998 999999999887 64
No 113
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=98.80 E-value=3.1e-08 Score=109.15 Aligned_cols=147 Identities=13% Similarity=0.075 Sum_probs=99.6
Q ss_pred eeEEEec-CCCCCCCCHHHHHHHHHHHHHHcccCCCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhC
Q psy2378 668 IHTIFIG-GGTPSLISDTGLDYLLKNIKKLLLFKKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILG 746 (956)
Q Consensus 668 i~~i~fg-ggtPs~L~~~~l~~ll~~i~~~~~~~~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~ 746 (956)
+..+.|. ||.|+..+ .+.++++.+++. + ..+++.+|... ++.++.| |..++.+++++.+++..+.+.
T Consensus 128 ~~~i~~s~gGEPll~~--~l~~li~~~~~~-g----~~~~l~TNG~~--~~~l~~L---~~~~v~isld~~~~~~~~~i~ 195 (311)
T 2z2u_A 128 PKHVAISLSGEPTLYP--YLDELIKIFHKN-G----FTTFVVSNGIL--TDVIEKI---EPTQLYISLDAYDLDSYRRIC 195 (311)
T ss_dssp CCEEEECSSSCGGGST--THHHHHHHHHHT-T----CEEEEEECSCC--HHHHHHC---CCSEEEEECCCSSTTTC----
T ss_pred CCEEEEeCCcCccchh--hHHHHHHHHHHC-C----CcEEEECCCCC--HHHHHhC---CCCEEEEEeecCCHHHHHHHh
Confidence 4667776 79998843 478888888764 2 36777777543 5555555 889999999999999999998
Q ss_pred CC--CCHHHHHHHHHHHHhcCCeeEEEEeecCCCCCHHHHHHHHHHHHccCCCeEEEEeeeccCCcccccCCCCCCCCHH
Q psy2378 747 RT--HDSKQAKYAIEIAKQYFNNFNLDLIYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSND 824 (956)
Q Consensus 747 R~--~~~~~~~~ai~~l~~~~~~i~~dlI~GlPgqT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~~~~~~~~~~ 824 (956)
+. ++.+++.++++.+++.+ .+.+.++ -+||.+. ++.+.++++.+++++.+.+.+|.|.++++. +......++.+
T Consensus 196 ~~~~~~~~~v~~~i~~l~~~g-~v~i~~~-~~~g~n~-~~~~~~~~~~~~~~~~i~l~~~~p~g~~~~-~~~~~~~~~~~ 271 (311)
T 2z2u_A 196 GGKKEYWESILNTLDILKEKK-RTCIRTT-LIRGYND-DILKFVELYERADVHFIELKSYMHVGYSQK-RLKKEDMLQHD 271 (311)
T ss_dssp CCCHHHHHHHHHHHHHHTTSS-SEEEEEE-ECTTTTC-CGGGTHHHHHHHTCSEEEEEECC-------------CCCCHH
T ss_pred CCccchHHHHHHHHHHHHhcC-CEEEEEE-EECCcch-hHHHHHHHHHHcCCCEEEEEeeEEcccccc-ccccccCCCHH
Confidence 87 67889999999998887 6665554 3577666 788889999999999999999999988872 22222456666
Q ss_pred HHHHHH
Q psy2378 825 ENAVMQ 830 (956)
Q Consensus 825 ~~~~~~ 830 (956)
+..+..
T Consensus 272 e~~~~~ 277 (311)
T 2z2u_A 272 EILKLA 277 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544333
No 114
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.79 E-value=1.8e-08 Score=114.48 Aligned_cols=146 Identities=10% Similarity=0.042 Sum_probs=120.4
Q ss_pred CCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 64 HPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
-|+-..+. ..++++|+++|+++.++||+.|+|++|| .++++ .+++++||+++ ++++.++..
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 35555553 3689999999999999999999999875 25778 99999999988 588999888
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. ++++++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++.+.+.++++++
T Consensus 217 ~~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~ 275 (388)
T 2nql_A 217 WNQTP----ERALELIAEMQPFDPWFAE--------AP--------VWTEDIAGLEKVSKNT-DVPIAVGEEWRTHWDMR 275 (388)
T ss_dssp SCSCH----HHHHHHHHHHGGGCCSCEE--------CC--------SCTTCHHHHHHHHTSC-CSCEEECTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCCCEEE--------CC--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHH
Confidence 77753 5688999999999999883 11 1246899999999988 79999999999999999
Q ss_pred HHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 221 LHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 221 ~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
++++. ||+|++-... +.++-+.++.+
T Consensus 276 ~~i~~~~~d~v~ik~~~-GGit~~~~i~~ 303 (388)
T 2nql_A 276 ARIERCRIAIVQPEMGH-KGITNFIRIGA 303 (388)
T ss_dssp HHHTTSCCSEECCCHHH-HCHHHHHHHHH
T ss_pred HHHHcCCCCEEEecCCC-CCHHHHHHHHH
Confidence 99987 9999997777 77776666554
No 115
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.78 E-value=2.7e-08 Score=112.43 Aligned_cols=148 Identities=16% Similarity=0.251 Sum_probs=123.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
.-|+..++.+.+|+++++.|+.+.+.||+.|+|++|+ +++...+++++||+++ ++|+.++..
T Consensus 130 ~v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 193 (369)
T 2p8b_A 130 EFPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVN 193 (369)
T ss_dssp CEECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred ceeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 3455678888899999999999999999999999873 4888899999999998 578888887
Q ss_pred cCCCCCCcHHHHH-HHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 141 IGIDDINSYDFVR-DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 141 ~g~~~~~~~~~~~-~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
.+|+. ++++ ++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++.+.+.+++++
T Consensus 194 ~~~~~----~~a~~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~ 252 (369)
T 2p8b_A 194 QGWKN----SANTLTALRSLGHLNIDWIE---------------QP-VIADDIDAMAHIRSKT-DLPLMIDEGLKSSREM 252 (369)
T ss_dssp TTTBS----HHHHHHHHHTSTTSCCSCEE---------------CC-BCTTCHHHHHHHHHTC-CSCEEESTTCCSHHHH
T ss_pred CCCCH----HHHHHHHHHHHHhCCCcEEE---------------CC-CCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHH
Confidence 77864 4578 999999999999873 11 1346899999999988 7999999999999999
Q ss_pred HHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 220 DLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 220 ~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+++++. ||+|++-.+-++.++-+.++.+
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 282 (369)
T 2p8b_A 253 RQIIKLEAADKVNIKLMKCGGIYPAVKLAH 282 (369)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HHHHHhCCCCEEEeecchhCCHHHHHHHHH
Confidence 999986 9999997777777666666554
No 116
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.77 E-value=5e-08 Score=111.37 Aligned_cols=152 Identities=13% Similarity=0.063 Sum_probs=124.1
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCCh-HHHHHHHHHHhhcc--CccEEE
Q psy2378 62 EEHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKP-LLVSDCIKAMRDSV--EIDITV 137 (956)
Q Consensus 62 ~~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~-~~~~eiv~~v~~~~--~~pv~v 137 (956)
+.-|+-.++. +.++++|+++|+++.+.||+.|+|++ ||. |+ ++ +...+++++||+++ ++++.+
T Consensus 132 ~~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~v 198 (401)
T 2hzg_A 132 HGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMV 198 (401)
T ss_dssp CCBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3445554554 67999999999999999999999997 774 33 45 88899999999988 588999
Q ss_pred EeccCC--CCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHH-hCCCceEEEecCCC
Q psy2378 138 KHRIGI--DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK-DFPELEIIINGGIK 214 (956)
Q Consensus 138 Kir~g~--~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~-~~~~ipVi~nGgI~ 214 (956)
+...+| +. ++++++++.|++.|+++|. +. .++.+|+..+++++ .+ ++||++.+.+.
T Consensus 199 Dan~~~~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~~-~iPI~~dE~~~ 257 (401)
T 2hzg_A 199 DVGQIFGEDV----EAAAARLPTLDAAGVLWLE--------EP--------FDAGALAAHAALAGRGA-RVRIAGGEAAH 257 (401)
T ss_dssp ECTTTTTTCH----HHHHTTHHHHHHTTCSEEE--------CC--------SCTTCHHHHHHHHTTCC-SSEEEECTTCS
T ss_pred ECCCCCCCCH----HHHHHHHHHHHhcCCCEEE--------CC--------CCccCHHHHHHHHhhCC-CCCEEecCCcC
Confidence 888788 53 4688999999999999883 11 12468999999998 77 79999999999
Q ss_pred CHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 215 TKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 215 s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
++++++++++. ||+|++-...++.++-+.++.+
T Consensus 258 ~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 292 (401)
T 2hzg_A 258 NFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVAD 292 (401)
T ss_dssp SHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHH
Confidence 99999999987 9999998777777776666554
No 117
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.76 E-value=3.1e-08 Score=112.19 Aligned_cols=147 Identities=10% Similarity=0.062 Sum_probs=122.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEe
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 139 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 139 (956)
+.-|+...+...++++++++|+++.+.||+.|++++||| +++...+++++||+++ ++++.++.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (378)
T 2qdd_A 133 TPVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDV 197 (378)
T ss_dssp CCEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEEC
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 344566666668999999999999999999999999986 5788999999999998 57888888
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
..+|+. ++++++++.|+ .|+ +|. +.. + +|+..+++++.+ ++||++.+.+.+++++
T Consensus 198 n~~~~~----~~a~~~~~~l~-~~i-~iE---------------qP~--~-d~~~~~~l~~~~-~iPI~~dE~~~~~~~~ 252 (378)
T 2qdd_A 198 NRAWTP----AIAVEVLNSVR-ARD-WIE---------------QPC--Q-TLDQCAHVARRV-ANPIMLDECLHEFSDH 252 (378)
T ss_dssp TTCCCH----HHHHHHHTSCC-CCC-EEE---------------CCS--S-SHHHHHHHHTTC-CSCEEECTTCCSHHHH
T ss_pred CCCCCH----HHHHHHHHHhC-CCc-EEE---------------cCC--C-CHHHHHHHHHhC-CCCEEECCCcCCHHHH
Confidence 777763 46889999998 888 762 111 2 899999999987 7999999999999999
Q ss_pred HHHhhh--cCEEEEccccccCCcchHHHHHh
Q psy2378 220 DLHLNY--IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 220 ~~~l~~--ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
+++++. ||+|++-.+.++.++-+.++.+.
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~ 283 (378)
T 2qdd_A 253 LAAWSRGACEGVKIKPNRVGGLTRARQIRDF 283 (378)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEecccccCCHHHHHHHHHH
Confidence 999987 99999988888888777766643
No 118
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.76 E-value=8.9e-08 Score=100.47 Aligned_cols=103 Identities=11% Similarity=0.060 Sum_probs=76.2
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEc--ccccccccCCCCCCCCCCcCcHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVH--ARNAFLKKLNPKQNRKIPILKYN 193 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh--~r~~~~~g~~~~~~~~~~~~~~~ 193 (956)
+|+.+.++++.+++. +.++.+.+. ..+.++.++++|+|+|.++ +.+. .. . ....+|+
T Consensus 114 ~p~~l~~~i~~~~~~-g~~v~~~v~-----------t~eea~~a~~~Gad~Ig~~~~g~t~-------~~-~-~~~~~~~ 172 (232)
T 3igs_A 114 RPVAVEALLARIHHH-HLLTMADCS-----------SVDDGLACQRLGADIIGTTMSGYTT-------PD-T-PEEPDLP 172 (232)
T ss_dssp CSSCHHHHHHHHHHT-TCEEEEECC-----------SHHHHHHHHHTTCSEEECTTTTSSS-------SS-C-CSSCCHH
T ss_pred CHHHHHHHHHHHHHC-CCEEEEeCC-----------CHHHHHHHHhCCCCEEEEcCccCCC-------CC-C-CCCCCHH
Confidence 566667777777654 666665432 1356788999999999653 3331 11 1 2346899
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcch
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
.+.++++. ++|||++|||.|++|+.++++. ||+|++|.+++ +||..
T Consensus 173 ~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~-~p~~~ 219 (232)
T 3igs_A 173 LVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT-RLEHI 219 (232)
T ss_dssp HHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH-CHHHH
T ss_pred HHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc-CHHHH
Confidence 99999886 7999999999999999999998 99999996665 67754
No 119
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.73 E-value=1.2e-07 Score=107.59 Aligned_cols=144 Identities=11% Similarity=0.051 Sum_probs=118.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
.++++++++|+++.+.||+.|.|++||+. +| ...+++...+++++||+++ ++++.++...+|+. +
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~----~ 214 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSR----T 214 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCH----H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----H
Confidence 68999999999999999999999999864 22 3458999999999999988 57888888777753 5
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCC-HHHHHHHhhh--cC
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT-KKEIDLHLNY--ID 227 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s-~~da~~~l~~--ad 227 (956)
+++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.+ +++++++++. ||
T Consensus 215 ~a~~~~~~l~~~~i~~iE~---------------P-~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~i~~~~~d 277 (382)
T 1rvk_A 215 DALALGRGLEKLGFDWIEE---------------P-MDEQSLSSYKWLSDNL-DIPVVGPESAAGKHWHRAEWIKAGACD 277 (382)
T ss_dssp HHHHHHHHHHTTTCSEEEC---------------C-SCTTCHHHHHHHHHHC-SSCEEECSSCSSHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHhcCCCEEeC---------------C-CChhhHHHHHHHHhhC-CCCEEEeCCccCcHHHHHHHHHcCCCC
Confidence 6889999999999998731 1 1246899999999988 799999999999 9999999987 99
Q ss_pred EEEEccccccCCcchHHHH
Q psy2378 228 GVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 228 ~VmiGR~~l~~P~l~~~i~ 246 (956)
+|++--.-++...=+.++.
T Consensus 278 ~v~ik~~~~GGit~~~~i~ 296 (382)
T 1rvk_A 278 ILRTGVNDVGGITPALKTM 296 (382)
T ss_dssp EEEECHHHHTSHHHHHHHH
T ss_pred EEeeCchhcCCHHHHHHHH
Confidence 9999655555554444444
No 120
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.71 E-value=4.3e-08 Score=110.88 Aligned_cols=148 Identities=9% Similarity=-0.013 Sum_probs=126.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEe
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 139 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 139 (956)
+.-|+..++++.+|+++++.|+.+.+.||+.|.|++|| +++.-.+++++||+++ ++++.++.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vDa 196 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYDV 196 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEEC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 45567778889999999999999999999999999987 3677889999999998 57899999
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
..+|+. +++.++++.|++.|+ +|. +. ..+|+..+++++.+ ++||++++.+.+++++
T Consensus 197 n~~~~~----~~a~~~~~~l~~~~i-~iE---------------qP---~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 252 (378)
T 3eez_A 197 NRGWTR----QQALRVMRATEDLHV-MFE---------------QP---GETLDDIAAIRPLH-SAPVSVDECLVTLQDA 252 (378)
T ss_dssp TTCCCH----HHHHHHHHHTGGGTC-CEE---------------CC---SSSHHHHHHTGGGC-CCCEEECTTCCSHHHH
T ss_pred CCCCCH----HHHHHHHHHhccCCe-EEe---------------cC---CCCHHHHHHHHhhC-CCCEEECCCCCCHHHH
Confidence 888874 458899999999998 772 11 12899999999988 7999999999999999
Q ss_pred HHHhhh--cCEEEEccccccCCcchHHHHHhh
Q psy2378 220 DLHLNY--IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 220 ~~~l~~--ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
+++++. ||.|++-.+.++.++-+.++.+..
T Consensus 253 ~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A 284 (378)
T 3eez_A 253 ARVARDGLAEVFGIKLNRVGGLTRAARMRDIA 284 (378)
T ss_dssp HHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEeCchhcCCHHHHHHHHHHH
Confidence 999986 999999999998888887776543
No 121
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.70 E-value=5.8e-08 Score=113.97 Aligned_cols=141 Identities=14% Similarity=0.197 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHH
Q psy2378 76 KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRD 154 (956)
Q Consensus 76 ~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~ 154 (956)
..+.+.+..+.++|+|.|++|++. | .++...++++++++.+ ++||.++--. + .+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~~------t----~e 290 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH----------G-----HSRRVIETLEMIKADYPDLPVVAGNVA------T----PE 290 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEEC------S----HH
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC----------C-----chHHHHHHHHHHHHHCCCceEEeCCcC------C----HH
Confidence 456678888899999999998641 2 3567789999999998 7999885211 1 34
Q ss_pred HHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHH---hCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 155 FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 155 ~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~---~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
.++.++++|+|+|.+....+.... +......+...+..+..+++ .+ ++|||++|||.+++|+.++++. ||+|+
T Consensus 291 ~a~~l~~~G~d~I~v~~~~G~~~~--~~~~~~~g~p~~~~l~~v~~~~~~~-~ipvia~GGI~~~~di~kala~GAd~V~ 367 (494)
T 1vrd_A 291 GTEALIKAGADAVKVGVGPGSICT--TRVVAGVGVPQLTAVMECSEVARKY-DVPIIADGGIRYSGDIVKALAAGAESVM 367 (494)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCH--HHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEcCCCCcccc--ccccCCCCccHHHHHHHHHHHHhhc-CCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 568899999999999542210000 00000011224555544444 34 7999999999999999999998 99999
Q ss_pred EccccccCCcchHH
Q psy2378 231 LGREAYKNPFLMSN 244 (956)
Q Consensus 231 iGR~~l~~P~l~~~ 244 (956)
+||+++.+|.+..+
T Consensus 368 iGr~~l~~~e~~~~ 381 (494)
T 1vrd_A 368 VGSIFAGTEEAPGE 381 (494)
T ss_dssp ESHHHHTBTTSSSE
T ss_pred ECHHHhcCCcCCcc
Confidence 99999999988644
No 122
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.68 E-value=6.2e-08 Score=104.54 Aligned_cols=200 Identities=11% Similarity=0.113 Sum_probs=138.2
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEec-c-ccccccc-CC-----chhcccc-----CCCCCCEEEEe---cCCCHHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTE-M-FTTQAIL-GN-----KKHCLDF-----NAEEHPIAFQV---GDNEPKKLAKS 81 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~te-m-~~~~~l~-~~-----~~~~~~~-----~~~~~p~~vQl---~g~~~~~~~~a 81 (956)
|.+.=|..+-+++.+.| ++.+++. . ++...+- .+ ...++.. ...+.|+++.+ +|.+|++..+.
T Consensus 21 ~~~a~D~~sA~~~~~aG-~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~ 99 (295)
T 1xg4_A 21 IVGTINANHALLAQRAG-YQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVART 99 (295)
T ss_dssp EEECSSHHHHHHHHHTT-CSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHH
Confidence 34566888888888887 6666655 3 2221111 11 1111110 11347999999 78899999999
Q ss_pred HHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHH
Q psy2378 82 AKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 82 A~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~ 161 (956)
++++.++|+++|.|+-+|. ++++....|..|....+.+..|-.++....+.++.|.-|..-.....++++++-++++++
T Consensus 100 v~~l~~aGa~gv~iEd~~~-~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~e 178 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVG-AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVE 178 (295)
T ss_dssp HHHHHHHTCSEEEEECBCS-SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCC-CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHH
Confidence 9999999999999999983 455555445567666666666655555555778888888742211224678899999999
Q ss_pred cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCC--CCHHHHHHHhhh--cCEEEEcccccc
Q psy2378 162 AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI--KTKKEIDLHLNY--IDGVMLGREAYK 237 (956)
Q Consensus 162 ~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI--~s~~da~~~l~~--ad~VmiGR~~l~ 237 (956)
+|+|.|.+++.+ +++.++++.+.+ ++|+++|... .++..-.+-|.. ++.|++|.+++.
T Consensus 179 AGAd~i~~e~~~-----------------~~~~~~~i~~~~-~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~ 240 (295)
T 1xg4_A 179 AGAEMLFPEAIT-----------------ELAMYRQFADAV-QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR 240 (295)
T ss_dssp TTCSEEEETTCC-----------------SHHHHHHHHHHH-CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH
T ss_pred cCCCEEEEeCCC-----------------CHHHHHHHHHHc-CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH
Confidence 999999999753 788999999998 7999998865 233222233333 999999998764
No 123
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.67 E-value=1.6e-07 Score=105.98 Aligned_cols=146 Identities=13% Similarity=0.166 Sum_probs=117.5
Q ss_pred CEEEEecCCCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEecc
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRI 141 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~ 141 (956)
|+-.-+.+.+++++++.|+.+.+ .||+.|+|+.||+ +++...+++++||++++ +++.+....
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 33344556789999999999998 9999999999874 46778899999999884 778888777
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~ 221 (956)
+|+. ++++++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++.+.+.+++++++
T Consensus 198 ~~~~----~~a~~~~~~l~~~~i~~iE---------------qP-~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 256 (370)
T 1nu5_A 198 GWDE----QTASIWIPRLEEAGVELVE---------------QP-VPRANFGALRRLTEQN-GVAILADESLSSLSSAFE 256 (370)
T ss_dssp CCCH----HHHHHHHHHHHHHTCCEEE---------------CC-SCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHH
T ss_pred CCCH----HHHHHHHHHHHhcCcceEe---------------CC-CCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHHHH
Confidence 7753 5688999999999999873 11 1346899999999988 799999999999999999
Q ss_pred Hhhh--cCEEEEccccccCCcchHHHH
Q psy2378 222 HLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 222 ~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
+++. ||.|++--.-++.++-..++.
T Consensus 257 ~i~~~~~d~v~ik~~~~GGit~~~~i~ 283 (370)
T 1nu5_A 257 LARDHAVDAFSLKLCNMGGIANTLKVA 283 (370)
T ss_dssp HHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHhCCCCEEEEchhhcCCHHHHHHHH
Confidence 9987 999999655555555444444
No 124
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.67 E-value=1.7e-07 Score=106.63 Aligned_cols=144 Identities=10% Similarity=0.060 Sum_probs=120.0
Q ss_pred Eec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCC
Q psy2378 69 QVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 145 (956)
Q Consensus 69 Ql~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 145 (956)
.+. +.++++|+++|+++.++||+.|+|+.|+. .+++..+++++||+++ ++|+.++...+|+.
T Consensus 143 ~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 207 (391)
T 2qgy_A 143 WSDLKKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDL 207 (391)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCH
Confidence 344 57899999999999999999999997731 1688999999999988 58899988877763
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 146 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++.
T Consensus 208 ----~~a~~~~~~l~~~~i~~iEq--------P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 266 (391)
T 2qgy_A 208 ----DQTKSFLKEVSSFNPYWIEE--------P--------VDGENISLLTEIKNTF-NMKVVTGEKQSGLVHFRELISR 266 (391)
T ss_dssp ----HHHHHHHHHHGGGCCSEEEC--------S--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHhcCCCeEeC--------C--------CChhhHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHHHHc
Confidence 56889999999999998831 1 1246899999999988 7999999999999999999987
Q ss_pred --cCEEEEccccccCCcchHHHHHh
Q psy2378 226 --IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 226 --ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
||+|++-..-++.++=+.++.+.
T Consensus 267 ~~~d~v~ik~~~~GGit~~~~i~~~ 291 (391)
T 2qgy_A 267 NAADIFNPDISGMGGLIDIIEISNE 291 (391)
T ss_dssp TCCSEECCBTTTSSCHHHHHHHHHH
T ss_pred CCCCEEEECcchhCCHHHHHHHHHH
Confidence 99999988777777766666543
No 125
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.65 E-value=1.2e-07 Score=108.65 Aligned_cols=147 Identities=16% Similarity=0.155 Sum_probs=118.8
Q ss_pred CCCEEEE-ec-C-C-------CHHHHHHHHHHHHHcCCCEEEecC------CC----CcceeeeCccccccc-CChHHHH
Q psy2378 63 EHPIAFQ-VG-D-N-------EPKKLAKSAKIIQKWGYDEINLNC------GC----PSNRVQNGFFGAILM-TKPLLVS 121 (956)
Q Consensus 63 ~~p~~vQ-l~-g-~-------~~~~~~~aA~~~~~~G~d~IeiN~------gC----P~~~~~~~~~G~~l~-~~~~~~~ 121 (956)
.-|+..+ +. | . ++++|+++|+++.+.||+.|.|+. |+ |..| +.||+... ++++...
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~---~~~GG~~~~~~~~~~~ 205 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN---RNYSGLLLADQLKMGE 205 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC---GGGGSCCCHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc---ccccCccchhHHHHHH
Confidence 3455555 65 4 4 899999999999999999999996 65 4443 36888764 5789999
Q ss_pred HHHHHHhhcc--CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHH
Q psy2378 122 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 199 (956)
Q Consensus 122 eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~ 199 (956)
+++++||+++ ++++.+....+|+ .++++++++.|++.|+++|.- . .++.+|+..++++
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~----~~~ai~~~~~l~~~~i~~iE~---------------P-~~~~~~~~~~~l~ 265 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLG----TNSAIQFAKAIEKYRIFLYEE---------------P-IHPLNSDNMQKVS 265 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSC----HHHHHHHHHHHGGGCEEEEEC---------------S-SCSSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCC----HHHHHHHHHHHHhcCCCeEEC---------------C-CChhhHHHHHHHH
Confidence 9999999988 5788887776665 356889999999999988741 0 1246899999999
Q ss_pred HhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEcc
Q psy2378 200 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGR 233 (956)
Q Consensus 200 ~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR 233 (956)
+.+ ++||++.+.+.++++++++++. ||.|++=-
T Consensus 266 ~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 300 (410)
T 2gl5_A 266 RST-TIPIATGERSYTRWGYRELLEKQSIAVAQPDL 300 (410)
T ss_dssp HHC-SSCEEECTTCCTTHHHHHHHHTTCCSEECCCT
T ss_pred hhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 998 7999999999999999999987 99998733
No 126
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.62 E-value=1.3e-07 Score=110.64 Aligned_cols=130 Identities=18% Similarity=0.183 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHH
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVG 157 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~ 157 (956)
.+.++.+.++|+|.|.||..+| +...+.++++++++.. +.|+.++--. ..+.|+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g---------------~~~~v~~~i~~i~~~~~~~~vi~g~v~----------t~e~a~ 312 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHG---------------HSQGVIDKVKEVRAKYPSLNIIAGNVA----------TAEATK 312 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTSEEEEEEEC----------SHHHHH
T ss_pred HHHHHHHHhhccceEEeccccc---------------chhhhhhHHHHHHHhCCCceEEeeeec----------cHHHHH
Confidence 4445567788999999998765 3556788999999887 4788876321 246689
Q ss_pred HHHHcCCCEEEEccc------ccccccCCCCCCCCCCcCcHHHHHHHHH---hCCCceEEEecCCCCHHHHHHHhhh-cC
Q psy2378 158 TVSSAGCRTFIVHAR------NAFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-ID 227 (956)
Q Consensus 158 ~l~~~G~~~i~vh~r------~~~~~g~~~~~~~~~~~~~~~~i~~v~~---~~~~ipVi~nGgI~s~~da~~~l~~-ad 227 (956)
.+.++|+|+|.+... +....| .+...+..+.++++ .+ ++|||+.|||.+++|+.++++. ||
T Consensus 313 ~~~~aGad~i~vg~g~gsi~~~~~~~g--------~g~p~~~~l~~v~~~~~~~-~iPVIa~GGI~~~~di~kala~GA~ 383 (511)
T 3usb_A 313 ALIEAGANVVKVGIGPGSICTTRVVAG--------VGVPQLTAVYDCATEARKH-GIPVIADGGIKYSGDMVKALAAGAH 383 (511)
T ss_dssp HHHHHTCSEEEECSSCSTTCCHHHHHC--------CCCCHHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHhCCCEEEECCCCccccccccccC--------CCCCcHHHHHHHHHHHHhC-CCcEEEeCCCCCHHHHHHHHHhCch
Confidence 999999999998221 111111 22346666666543 34 6999999999999999999998 99
Q ss_pred EEEEccccccCCcch
Q psy2378 228 GVMLGREAYKNPFLM 242 (956)
Q Consensus 228 ~VmiGR~~l~~P~l~ 242 (956)
+||+||+++.-..-.
T Consensus 384 ~V~vGs~~~~~~es~ 398 (511)
T 3usb_A 384 VVMLGSMFAGVAESP 398 (511)
T ss_dssp EEEESTTTTTBTTSS
T ss_pred hheecHHHhcCccCc
Confidence 999999987765543
No 127
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.61 E-value=3.5e-07 Score=103.75 Aligned_cols=147 Identities=16% Similarity=0.136 Sum_probs=123.6
Q ss_pred CCEEEEe-c-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEe
Q psy2378 64 HPIAFQV-G-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 139 (956)
Q Consensus 64 ~p~~vQl-~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 139 (956)
-|+-..+ . +.+|+++++.|+.+.+.||+.|.|+.|| +++.-.+++++||+++ +.++.|+.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 5777777 5 7899999999999999999999999887 4788889999999998 57899888
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHH-HhCCCceEEEecCCCCHHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK-KDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~-~~~~~ipVi~nGgI~s~~d 218 (956)
..+|+. ++++++++.|++.|+++|.- . .++.+|+..++++ +.+ ++||++.+.+.++++
T Consensus 203 n~~~~~----~~A~~~~~~l~~~~i~~iEq---------------P-~~~~d~~~~~~l~~~~~-~iPIa~dE~i~~~~~ 261 (389)
T 3ozy_A 203 NQSLGR----HDALAMLRILDEAGCYWFEE---------------P-LSIDDIEGHRILRAQGT-PVRIATGENLYTRNA 261 (389)
T ss_dssp TTCCCH----HHHHHHHHHHHHTTCSEEES---------------C-SCTTCHHHHHHHHTTCC-SSEEEECTTCCHHHH
T ss_pred CCCcCH----HHHHHHHHHHHhcCCCEEEC---------------C-CCcccHHHHHHHHhcCC-CCCEEeCCCCCCHHH
Confidence 888864 46889999999999999941 1 1246899999999 887 799999999999999
Q ss_pred HHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 219 IDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 219 a~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
++++++. ||.|++--+-.+...=..++.+
T Consensus 262 ~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~ 292 (389)
T 3ozy_A 262 FNDYIRNDAIDVLQADASRAGGITEALAISA 292 (389)
T ss_dssp HHHHHHTTCCSEECCCTTTSSCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEeCccccCCHHHHHHHHH
Confidence 9999986 9999997777777665555554
No 128
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.61 E-value=2.2e-07 Score=104.93 Aligned_cols=145 Identities=11% Similarity=0.071 Sum_probs=118.9
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEe
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 139 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKi 139 (956)
+.-|+...+.+.++++++++|+++.+.||+.|+|+.|. +++...+++++||+++ ++++.++.
T Consensus 134 ~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 134 TRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp SCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 34567777888899999999999999999999999873 4788899999999998 57888888
Q ss_pred ccCCCCCCcHHHHHHHHHHH-HHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTV-SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l-~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
..+|+. ++++++++.| ++.|+ +|. +.. + +|+..+++++.+ ++||++.+.+.++++
T Consensus 198 n~~~~~----~~a~~~~~~l~~~~~i-~iE---------------~P~--~-~~~~~~~l~~~~-~iPI~~dE~~~~~~~ 253 (371)
T 2ps2_A 198 NGKLSV----ETALRLLRLLPHGLDF-ALE---------------APC--A-TWRECISLRRKT-DIPIIYDELATNEMS 253 (371)
T ss_dssp TTBCCH----HHHHHHHHHSCTTCCC-EEE---------------CCB--S-SHHHHHHHHTTC-CSCEEESTTCCSHHH
T ss_pred CCCcCH----HHHHHHHHHHHhhcCC-cCc---------------CCc--C-CHHHHHHHHhhC-CCCEEeCCCcCCHHH
Confidence 777753 5688999999 99998 762 111 2 899999999988 799999999999999
Q ss_pred HHHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 219 IDLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 219 a~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
++++++. ||+|++--+-++.+.=..++.
T Consensus 254 ~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 283 (371)
T 2ps2_A 254 IVKILADDAAEGIDLKISKAGGLTRGRRQR 283 (371)
T ss_dssp HHHHHHHTCCSEEEEEHHHHTSHHHHHHHH
T ss_pred HHHHHHhCCCCEEEechhhcCCHHHHHHHH
Confidence 9999987 999999666665555444444
No 129
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.61 E-value=3e-07 Score=103.69 Aligned_cols=147 Identities=12% Similarity=0.099 Sum_probs=119.6
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEecc
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI 141 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 141 (956)
-|+-.++.+.+|+++++.|+.+.+.||+.|.++.||+ +++...+++++||+++ ++++.+....
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 4455678888999999999999999999999998872 5788899999999988 5788888877
Q ss_pred CCCCCCcHHHHHHHHHHHHH--cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSS--AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~--~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
+|+. ++++++++.|++ .|+++|. +. .++.+|+..+++++.+ ++||++.+.+.+++++
T Consensus 195 ~~~~----~~a~~~~~~l~~~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 253 (366)
T 1tkk_A 195 GWRP----KEAVTAIRKMEDAGLGIELVE---------------QP-VHKDDLAGLKKVTDAT-DTPIMADESVFTPRQA 253 (366)
T ss_dssp CSCH----HHHHHHHHHHHHTTCCEEEEE---------------CC-SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHH
T ss_pred CCCH----HHHHHHHHHHhhcCCCceEEE---------------CC-CCcccHHHHHHHHhhC-CCCEEEcCCCCCHHHH
Confidence 7753 568899999999 8888773 11 2346899999999988 7999999999999999
Q ss_pred HHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 220 DLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 220 ~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
.++++. ||+|++--.-++.+.=..++.
T Consensus 254 ~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 282 (366)
T 1tkk_A 254 FEVLQTRSADLINIKLMKAGGISGAEKIN 282 (366)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHHHhCCCCEEEeehhhhcCHHHHHHHH
Confidence 999986 999999655555554444443
No 130
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=98.60 E-value=2.8e-07 Score=105.39 Aligned_cols=171 Identities=8% Similarity=0.131 Sum_probs=124.0
Q ss_pred CCCcceeeeeeecccccCCc---chHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHHHHHHHHcccC
Q psy2378 624 IPYKVIINEAIELVKSFGNI---DEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLFK 700 (956)
Q Consensus 624 ~P~c~~~Ce~C~l~k~~~~~---~~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll~~i~~~~~~~ 700 (956)
...|+..|.||......+.. ....-+..+++++... ..+..|.|.||.|...+.+.+.++++.+++.-
T Consensus 122 T~~Cnl~C~yC~~~~~~~~~~~~ls~eei~~~i~~i~~~------~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~--- 192 (416)
T 2a5h_A 122 TDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNT------PQVRDVLLSGGDALLVSDETLEYIIAKLREIP--- 192 (416)
T ss_dssp ESCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHHHHHHTC------TTCCEEEEEESCTTSSCHHHHHHHHHHHHTST---
T ss_pred CCCccccCcCCCCcccCCCccCCCCHHHHHHHHHHHHhc------CCCcEEEEECCCCCCCCHHHHHHHHHHHHhcC---
Confidence 57999999999654432211 1233344444444321 23677999999999998878899999887641
Q ss_pred CCceeEEEeC-----CCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHhcCCeeEEEEee-
Q psy2378 701 KNISITLEAN-----PSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIY- 774 (956)
Q Consensus 701 ~~~eitle~n-----p~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~~~~~~~~~ai~~l~~~~~~i~~dlI~- 774 (956)
....+++.+| |..+++++++.|+++ .++.+++++.+++. + + +++.++++.+++.|+.+.+..++
T Consensus 193 ~v~~i~i~Tng~~~~p~~it~e~l~~L~~~--~~v~Isl~~~~~~e---i----~-~~v~~ai~~L~~aGi~v~i~~vll 262 (416)
T 2a5h_A 193 HVEIVRIGSRTPVVLPQRITPELVNMLKKY--HPVWLNTHFNHPNE---I----T-EESTRACQLLADAGVPLGNQSVLL 262 (416)
T ss_dssp TCCEEEEECSHHHHCGGGCCHHHHHHHGGG--CSEEEEECCCSGGG---C----C-HHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CccEEEEEecccccccccCCHHHHHHHHhc--CcEEEEEecCCHHH---H----h-HHHHHHHHHHHHcCCEEEEEEEEE
Confidence 1225666554 467889999999998 78999999988832 2 2 89999999999988766554444
Q ss_pred -cCCCCCHHHHHHHHHHHHccCCCeEEEEeeeccCCccccc
Q psy2378 775 -ALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFK 814 (956)
Q Consensus 775 -GlPgqT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~ 814 (956)
|+. ++.+++.+.++++.+++++...++.+.+.+||+.++
T Consensus 263 ~GvN-d~~e~l~~l~~~l~~lgv~~~~i~~~~~~~g~~~~~ 302 (416)
T 2a5h_A 263 RGVN-DCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFR 302 (416)
T ss_dssp TTTT-CSHHHHHHHHHHHHHTTEEEEEEECCCCBTTCGGGC
T ss_pred CCCC-CCHHHHHHHHHHHHHcCCceEEEeecCCCCCccccc
Confidence 665 788899999999999998877777666678887654
No 131
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.56 E-value=2e-07 Score=96.07 Aligned_cols=149 Identities=16% Similarity=0.189 Sum_probs=102.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+.|+++.|.+.+++++.+.++.+.+.|++.|++++.||. ..+.++.+|+.++..+.++...
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~------------------~~~~i~~ir~~~~~~~~ig~~~- 69 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPD------------------ADTVIKELSFLKEKGAIIGAGT- 69 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTT------------------HHHHHHHTHHHHHTTCEEEEES-
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChh------------------HHHHHHHHHHHCCCCcEEEecc-
Confidence 468999999999999999999999999999999998872 1356777777653223333321
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccc-------------ccc-CCCC-------------CCCCCCcCcHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF-------------LKK-LNPK-------------QNRKIPILKYNFV 195 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~-------------~~g-~~~~-------------~~~~~~~~~~~~i 195 (956)
- .+. +-++.+.++|+|+| ++..... ..| .++. ......+..++.+
T Consensus 70 -v--~~~----~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~ 141 (205)
T 1wa3_A 70 -V--TSV----EQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFV 141 (205)
T ss_dssp -C--CSH----HHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred -c--CCH----HHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHH
Confidence 1 111 23566777999999 7643210 000 0000 0000011345778
Q ss_pred HHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 196 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 196 ~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
+++++.+|++||++.|||+ ++++.++++. +|+|.+|++++. ++
T Consensus 142 ~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d 185 (205)
T 1wa3_A 142 KAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GT 185 (205)
T ss_dssp HHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SC
T ss_pred HHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-CC
Confidence 8888877689999999996 8899999988 999999999987 55
No 132
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.55 E-value=2.2e-07 Score=105.76 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=114.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcc--eeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCC
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSN--RVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDIN 147 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~--~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~ 147 (956)
+.++++|+++|+++.+.||+.|.|+.||++. .-....||++..++++...+++++||+++ ++++.+....+|+.
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~-- 212 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTT-- 212 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH--
Confidence 4689999999999999999999999997531 00123577777788999999999999988 57888877767753
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--
Q psy2378 148 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-- 225 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-- 225 (956)
++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++.
T Consensus 213 --~~a~~~~~~l~~~~i~~iE~---------------P-~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~ 273 (392)
T 2poz_A 213 --DETIRFCRKIGELDICFVEE---------------P-CDPFDNGALKVISEQI-PLPIAVGERVYTRFGFRKIFELQA 273 (392)
T ss_dssp --HHHHHHHHHHGGGCEEEEEC---------------C-SCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHTTTC
T ss_pred --HHHHHHHHHHHhcCCCEEEC---------------C-CCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCC
Confidence 56889999999999988731 0 1346899999999988 7999999999999999999987
Q ss_pred cCEEEEc
Q psy2378 226 IDGVMLG 232 (956)
Q Consensus 226 ad~VmiG 232 (956)
||.|++-
T Consensus 274 ~d~v~ik 280 (392)
T 2poz_A 274 CGIIQPD 280 (392)
T ss_dssp CSEECCC
T ss_pred CCEEecC
Confidence 9999873
No 133
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.53 E-value=3.4e-08 Score=104.64 Aligned_cols=102 Identities=12% Similarity=0.139 Sum_probs=83.7
Q ss_pred EEEEeccCCCCCCc--HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 135 ITVKHRIGIDDINS--YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 135 v~vKir~g~~~~~~--~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
..||++.||.+... ..+..++++.++++|+++|+++.++....+ .+.+++.+++++ .+ ++||+++|+
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~---------~~~~~~~i~~i~-~~-~ipvi~~Gg 81 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIEN---------SGENLPVLEKLS-EF-AEHIQIGGG 81 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHHC---------CCTTHHHHHHGG-GG-GGGEEEESS
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEecccccccC---------CchhHHHHHHHH-hc-CCcEEEECC
Confidence 57899999865431 124689999999999999999876531111 135799999998 76 799999999
Q ss_pred CCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHh
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~ 248 (956)
|.++++++++++. ||+|++|++++.||+++.++ +.
T Consensus 82 i~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~ 117 (241)
T 1qo2_A 82 IRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-RE 117 (241)
T ss_dssp CCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HT
T ss_pred CCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HH
Confidence 9999999999988 99999999999999999998 53
No 134
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.53 E-value=6e-07 Score=95.42 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=115.5
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHHHcCCCEEEec--CCCCcceeeeCc-ccc-----ccc--CChHHHHHHHHHHhhc
Q psy2378 63 EHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLN--CGCPSNRVQNGF-FGA-----ILM--TKPLLVSDCIKAMRDS 130 (956)
Q Consensus 63 ~~p~~vQl~g~~~--~~~~~aA~~~~~~G~d~IeiN--~gCP~~~~~~~~-~G~-----~l~--~~~~~~~eiv~~v~~~ 130 (956)
+.+++..|.+.+| +.+.+.|+.++++ +|.||++ ++||.. || .-. +|. .+.....++++++++.
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~----DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~ 78 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIA----DGKTIQESHYRALKNGFKLREAFWIVKEFRRH 78 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTT----SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCC----CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh
Confidence 3458899999998 5999999999998 9999998 778742 11 000 000 1677788999999999
Q ss_pred cCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc--------------------------------c---
Q psy2378 131 VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------------------------------F--- 175 (956)
Q Consensus 131 ~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~--------------------------------~--- 175 (956)
+++||.+........ .....+.++.+.++|+|.+++|.-.. .
T Consensus 79 ~~~pv~~~~~~~~~~---~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~ 155 (248)
T 1geq_A 79 SSTPIVLMTYYNPIY---RAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDM 155 (248)
T ss_dssp CCCCEEEEECHHHHH---HHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeccchhh---hcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhc
Confidence 999988765321000 00024678888899999999874100 0
Q ss_pred cccC------CCCCCCC--CCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccC
Q psy2378 176 LKKL------NPKQNRK--IPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN 238 (956)
Q Consensus 176 ~~g~------~~~~~~~--~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~ 238 (956)
..++ .|..... .++..++.++++++.+ ++||++.|||++++++.++++. ||+|.+|++++..
T Consensus 156 ~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 156 TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp CSSEEEEECCC-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 0000 0000000 1133467899999987 7999999999999999999887 9999999987754
No 135
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.48 E-value=5.6e-07 Score=102.80 Aligned_cols=134 Identities=16% Similarity=0.170 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecC------CCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCC
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNC------GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 145 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~------gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 145 (956)
++++|++.|+++.+.||+.|.|+. |++... ...|....++++...+++++||+++ ++++.+....+|+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~- 221 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTD- 221 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCC-
Confidence 899999999999999999999996 664222 1122223457788999999999988 5788887776675
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 146 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
.++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++.
T Consensus 222 ---~~~ai~~~~~l~~~~i~~iE~--------P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 281 (403)
T 2ox4_A 222 ---LVSAIQFAKAIEEFNIFFYEE--------I--------NTPLNPRLLKEAKKKI-DIPLASGERIYSRWGFLPFLED 281 (403)
T ss_dssp ---HHHHHHHHHHHGGGCEEEEEC--------C--------SCTTSTHHHHHHHHTC-CSCEEECTTCCHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHhhCCCEEeC--------C--------CChhhHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHc
Confidence 356889999999999988731 0 1346899999999988 7999999999999999999986
Q ss_pred --cCEEEE
Q psy2378 226 --IDGVML 231 (956)
Q Consensus 226 --ad~Vmi 231 (956)
||.|++
T Consensus 282 ~~~d~v~i 289 (403)
T 2ox4_A 282 RSIDVIQP 289 (403)
T ss_dssp TCCSEECC
T ss_pred CCCCEEec
Confidence 999887
No 136
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.48 E-value=1.5e-05 Score=82.78 Aligned_cols=204 Identities=11% Similarity=0.174 Sum_probs=132.7
Q ss_pred ccccccCCCceEEccCcCcCCH-HHHHHHHHcCCCcEEEeccccccccc--CCchhcccc-CCCCCCEEEEecC-CCHHH
Q psy2378 3 MINSKYNKRKISIAPMMNLTDR-HCRMFHRQITRYSWLYTEMFTTQAIL--GNKKHCLDF-NAEEHPIAFQVGD-NEPKK 77 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~-~fR~~~~~~g~~~l~~tem~~~~~l~--~~~~~~~~~-~~~~~p~~vQl~g-~~~~~ 77 (956)
|++..| ..|+++- -..|.+. ..+...++-| +.++-.-+=.. .+. +....++.. .+.+-.+...-.| .+.++
T Consensus 13 i~~~~f-~SRl~~G-tgky~~~~~~~~a~~asg-~e~vtva~rR~-~~~~~~~~~~~~~~i~~~~~~~lpNTag~~ta~e 88 (265)
T 1wv2_A 13 IAGRTY-GSRLLVG-TGKYKDLDETRRAIEASG-AEIVTVAVRRT-NIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVE 88 (265)
T ss_dssp ETTEEE-SCCEEEC-CSCSSSHHHHHHHHHHSC-CSEEEEEGGGC-CC-------------CTTTSEEEEECTTCCSHHH
T ss_pred ECCEEe-ecceEEe-cCCCCCHHHHHHHHHHhC-CCeEEEEEEee-ccccCCCcchHHhhhhhcCCEECCcCCCCCCHHH
Confidence 556677 7788653 3446555 4444455665 55554443222 221 111223333 2335556666665 57999
Q ss_pred HHHHHHHHHH-c-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHH
Q psy2378 78 LAKSAKIIQK-W-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDF 155 (956)
Q Consensus 78 ~~~aA~~~~~-~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~ 155 (956)
.+..|+++++ + |-++|-|-.-. + --.++.|+....+..+.+++. |+.+..-+-. + ..+
T Consensus 89 Av~~a~lare~~~~~~~iKlEv~~-------d--~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~~d---d-------~~~ 148 (265)
T 1wv2_A 89 AVRTCRLARELLDGHNLVKLEVLA-------D--QKTLFPNVVETLKAAEQLVKD-GFDVMVYTSD---D-------PII 148 (265)
T ss_dssp HHHHHHHHHTTTTSCCEEEECCBS-------C--TTTCCBCHHHHHHHHHHHHTT-TCEEEEEECS---C-------HHH
T ss_pred HHHHHHHHHHHcCCCCeEEEEeec-------C--ccccCcCHHHHHHHHHHHHHC-CCEEEEEeCC---C-------HHH
Confidence 9999999999 5 46787775321 1 123677888777777777654 5555432221 1 468
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~ 234 (956)
+++++++|++++..++..- | ++ .+..+++.++++++.. ++|||+.|||.+++|+.++++. ||+|++|.+
T Consensus 149 akrl~~~G~~aVmPlg~pI---G-sG-----~Gi~~~~lI~~I~e~~-~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSA 218 (265)
T 1wv2_A 149 ARQLAEIGCIAVMPLAGLI---G-SG-----LGICNPYNLRIILEEA-KVPVLVDAGVGTASDAAIAMELGCEAVLMNTA 218 (265)
T ss_dssp HHHHHHSCCSEEEECSSST---T-CC-----CCCSCHHHHHHHHHHC-SSCBEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHhCCCEEEeCCccC---C-CC-----CCcCCHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 9999999999998876531 1 01 1235899999999976 8999999999999999999998 999999998
Q ss_pred ccc--CCc
Q psy2378 235 AYK--NPF 240 (956)
Q Consensus 235 ~l~--~P~ 240 (956)
... ||.
T Consensus 219 I~~a~dP~ 226 (265)
T 1wv2_A 219 IAHAKDPV 226 (265)
T ss_dssp HHTSSSHH
T ss_pred HhCCCCHH
Confidence 853 564
No 137
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.47 E-value=3.4e-06 Score=90.29 Aligned_cols=204 Identities=11% Similarity=0.060 Sum_probs=122.6
Q ss_pred CccccccCCCceEEccCcCcCCH-HHHHHHHHcCCCcEEEecccccccccC-CchhccccC-CCCCCEEEEecC-CCHHH
Q psy2378 2 NMINSKYNKRKISIAPMMNLTDR-HCRMFHRQITRYSWLYTEMFTTQAILG-NKKHCLDFN-AEEHPIAFQVGD-NEPKK 77 (956)
Q Consensus 2 ~~~~~~~~~~~i~lAPM~~~td~-~fR~~~~~~g~~~l~~tem~~~~~l~~-~~~~~~~~~-~~~~p~~vQl~g-~~~~~ 77 (956)
+|.+.+| +||++++.- ++.+. .+.......| +|++-..+=.++ ..+ ....++..- .-..+++.+..+ .++++
T Consensus 5 ~i~~~~~-~~~~~~~t~-g~p~~~~~~~~l~~~G-ad~ielg~pr~~-~~g~~~~~~~~~l~~~~~~~~pn~~~~~~~~~ 80 (264)
T 1xm3_A 5 TIGGKSF-QSRLLLGTG-KYPSFDIQKEAVAVSE-SDILTFAVRRMN-IFEASQPNFLEQLDLSKYTLLPNTAGASTAEE 80 (264)
T ss_dssp EETTEEE-SCCEEEECS-CSSCHHHHHHHHHHHT-CSEEEEETTSST-TC-------CTTCCGGGSEEEEECTTCSSHHH
T ss_pred EECCEEe-cCCCEEEec-CCCCHHHHHHHHHHcC-CeEEEEcccccc-cCCCCHHHHHHHHHhcCCeEcCCccccCCHHH
Confidence 4677889 999988754 44444 4444344445 677733331122 211 112222221 224566678877 78888
Q ss_pred HHHHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHHHHH
Q psy2378 78 LAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRD 154 (956)
Q Consensus 78 ~~~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~ 154 (956)
....++.++++ |.+.|.++.- | +.. .+ ++...++++.+++.+ ++.+..-.- + + .+
T Consensus 81 ~~~f~~~a~~agg~~~i~l~i~-~------d~~--~~---~~e~~~~~~~a~~~~~~g~~vi~~~~---~--~-----~~ 138 (264)
T 1xm3_A 81 AVRIARLAKASGLCDMIKVEVI-G------CSR--SL---LPDPVETLKASEQLLEEGFIVLPYTS---D--D-----VV 138 (264)
T ss_dssp HHHHHHHHHHTTCCSSEEECCB-C------CTT--TC---CBCHHHHHHHHHHHHHTTCCEEEEEC---S--C-----HH
T ss_pred HHHHHHHHHHcCCCCeEEEeec-C------CCc--cc---ccchHHHHHHHHHHHCCCeEEEEEcC---C--C-----HH
Confidence 77777888887 4677777651 1 100 00 123456667766654 333322111 1 1 13
Q ss_pred HHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 155 FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 155 ~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
.++++++.|+++|...+.. .|.. .+..+++.++.+++.. ++||++-|||.+++++.++++. ||+|.+|+
T Consensus 139 ~a~~~~~~gad~v~~~~~~------~Gt~---~~~~~~~~l~~i~~~~-~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASP------IGSG---QGILNPLNLSFIIEQA-KVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp HHHHHHHHTCSCBEECSSS------TTCC---CCCSCHHHHHHHHHHC-SSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHhCCCEEEECCcc------cCCC---CCCCCHHHHHHHHhcC-CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 5788899999999331221 1111 1123578889998876 8999999999999999999988 99999999
Q ss_pred ccccCCcc
Q psy2378 234 EAYKNPFL 241 (956)
Q Consensus 234 ~~l~~P~l 241 (956)
+++..++.
T Consensus 209 Ai~~a~dp 216 (264)
T 1xm3_A 209 AVSGADDP 216 (264)
T ss_dssp HHHTSSSH
T ss_pred HHhCCCCH
Confidence 98865553
No 138
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.47 E-value=2.3e-06 Score=97.13 Aligned_cols=123 Identities=8% Similarity=-0.020 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
+++++++.|+++.+.||+.|.|+.|+ .+++...+++++||+++ ++++.+....+|+ .++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~----~~~ 205 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWT----SKE 205 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBC----HHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCC----HHH
Confidence 89999999999999999999999886 25678899999999998 5778887776775 356
Q ss_pred HHHHHHHHHH--cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 152 VRDFVGTVSS--AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 152 ~~~~a~~l~~--~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++.|++ .|+.+|. +. .++.+|+..+++++.++++||++.+.+ ++++++++++. ||
T Consensus 206 a~~~~~~l~~~g~~i~~iE---------------qP-~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d 268 (389)
T 2oz8_A 206 ALTKLVAIREAGHDLLWVE---------------DP-ILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAAD 268 (389)
T ss_dssp HHHHHHHHHHTTCCCSEEE---------------SC-BCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhcCCCceEEe---------------CC-CCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCC
Confidence 8899999999 7777762 11 124689999999998624999999999 99999999987 99
Q ss_pred EEEEc
Q psy2378 228 GVMLG 232 (956)
Q Consensus 228 ~VmiG 232 (956)
+|++.
T Consensus 269 ~v~ik 273 (389)
T 2oz8_A 269 ILNVH 273 (389)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99997
No 139
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.46 E-value=7.2e-07 Score=101.48 Aligned_cols=123 Identities=14% Similarity=0.063 Sum_probs=104.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
++++|+++|+++.++||++|+|+.|- .++++..+++++||+++ ++++.+....+|+ .++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~----~~~ 222 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWD----RPT 222 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCC----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCC----HHH
Confidence 89999999999999999999998652 25889999999999997 5788888776775 356
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 229 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~V 229 (956)
++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++. ||+|
T Consensus 223 a~~~~~~l~~~~i~~iE~--------P--------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v 285 (393)
T 2og9_A 223 AQRMCRIFEPFNLVWIEE--------P--------LDAYDHEGHAALALQF-DTPIATGEMLTSAAEHGDLIRHRAADYL 285 (393)
T ss_dssp HHHHHHHHGGGCCSCEEC--------C--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHhhCCCEEEC--------C--------CCcccHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHCCCCCEE
Confidence 889999999999998731 0 1246899999999998 7999999999999999999987 9999
Q ss_pred EEc
Q psy2378 230 MLG 232 (956)
Q Consensus 230 miG 232 (956)
++-
T Consensus 286 ~ik 288 (393)
T 2og9_A 286 MPD 288 (393)
T ss_dssp CCC
T ss_pred eeC
Confidence 873
No 140
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.45 E-value=1.4e-06 Score=95.18 Aligned_cols=155 Identities=20% Similarity=0.266 Sum_probs=101.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
..|+++.+.+ .+.|+.+.++|+++|+++.++|..... ..|..+.+.++. ++.+++.+++|+.++.+.+
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~--~~G~~~~~~~~~----i~~i~~~~~~Pvi~~~~~~ 88 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRA--QGGVARMSDPKI----IKEIMAAVSIPVMAKVRIG 88 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHH--TTCCCCCCCHHH----HHHHHTTCSSCEEEEEETT
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHh--hcCCccCCCHHH----HHHHHHhcCCCeEEEeccC
Confidence 4578887765 567777788999999998776643211 135456666654 5567777899999887765
Q ss_pred CCCCCcHHHHHHHHHHHHHcCC---------------------------------------------CEEEEccccc---
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGC---------------------------------------------RTFIVHARNA--- 174 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~---------------------------------------------~~i~vh~r~~--- 174 (956)
+ .+.++.+.++|+ |+|.+|+-..
T Consensus 89 ~---------~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~ 159 (297)
T 2zbt_A 89 H---------FVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGN 159 (297)
T ss_dssp C---------HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCC
T ss_pred C---------HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcc
Confidence 2 122333444444 4444442000
Q ss_pred ----------------ccccCCCCCC---CCCCcCcHHHHHHHHHhCCCceEE--EecCCCCHHHHHHHhhh-cCEEEEc
Q psy2378 175 ----------------FLKKLNPKQN---RKIPILKYNFVYNLKKDFPELEII--INGGIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 175 ----------------~~~g~~~~~~---~~~~~~~~~~i~~v~~~~~~ipVi--~nGgI~s~~da~~~l~~-ad~VmiG 232 (956)
...|+++... ....+.+++.++++++.. ++||+ +.|||.+++++.++++. ||+|++|
T Consensus 160 ~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvG 238 (297)
T 2zbt_A 160 VVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVFVG 238 (297)
T ss_dssp THHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEc
Confidence 0001111000 001245788899999886 79998 99999999999999988 9999999
Q ss_pred cccccCC
Q psy2378 233 REAYKNP 239 (956)
Q Consensus 233 R~~l~~P 239 (956)
++++..+
T Consensus 239 sai~~~~ 245 (297)
T 2zbt_A 239 SGIFKSG 245 (297)
T ss_dssp GGGGGSS
T ss_pred hHHhCCC
Confidence 9999543
No 141
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.44 E-value=1e-06 Score=100.27 Aligned_cols=131 Identities=16% Similarity=0.265 Sum_probs=108.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEecc
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI 141 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 141 (956)
-|+...+...++++++++|+++.+.||+.|.|+.|+ +++...+++++||+++ ++++.+....
T Consensus 135 vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 135 IPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred cceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 344444544789999999999999999999998763 5688899999999997 5788888776
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~ 221 (956)
+|+ .++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.+++++++
T Consensus 199 ~~~----~~~a~~~~~~l~~~~i~~iEq---------------P-~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ 257 (397)
T 2qde_A 199 AWT----YDQALTTIRALEKYNLSKIEQ---------------P-LPAWDLDGMARLRGKV-ATPIYADESAQELHDLLA 257 (397)
T ss_dssp CCC----HHHHHHHHHHHGGGCCSCEEC---------------C-SCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHH
T ss_pred CCC----HHHHHHHHHHHHhCCCCEEEC---------------C-CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHH
Confidence 775 356889999999999998731 1 1246899999999988 799999999999999999
Q ss_pred Hhhh--cCEEEE
Q psy2378 222 HLNY--IDGVML 231 (956)
Q Consensus 222 ~l~~--ad~Vmi 231 (956)
+++. ||.|++
T Consensus 258 ~i~~~~~d~v~i 269 (397)
T 2qde_A 258 IINKGAADGLMI 269 (397)
T ss_dssp HHHHTCCSEEEE
T ss_pred HHHcCCCCEEEE
Confidence 9986 999998
No 142
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.44 E-value=9.2e-07 Score=101.19 Aligned_cols=132 Identities=15% Similarity=0.179 Sum_probs=109.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecC----CCCcceeeeCccccccc--CChHHHHHHHHHHhhcc--CccEEEEeccCCCC
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNC----GCPSNRVQNGFFGAILM--TKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 145 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~----gCP~~~~~~~~~G~~l~--~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 145 (956)
+|+++++.|+++.+.||+.|.++. |++... ||+++. ++++...+++++||+++ ++++.+....+|+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~-----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~- 222 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRD-----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFD- 222 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSC-----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC-----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC-
Confidence 799999999999999999999998 664322 677776 47899999999999988 4677777665664
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 146 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
.++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++.
T Consensus 223 ---~~~a~~~~~~l~~~~i~~iEe--------P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 282 (410)
T 2qq6_A 223 ---IPSSIRFARAMEPFGLLWLEE--------P--------TPPENLDALAEVRRST-STPICAGENVYTRFDFRELFAK 282 (410)
T ss_dssp ---HHHHHHHHHHHGGGCCSEEEC--------C--------SCTTCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHhhcCCCeEEC--------C--------CChhhHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHc
Confidence 356889999999999998741 0 1246899999999988 7999999999999999999986
Q ss_pred --cCEEEE
Q psy2378 226 --IDGVML 231 (956)
Q Consensus 226 --ad~Vmi 231 (956)
||.|++
T Consensus 283 ~~~d~v~i 290 (410)
T 2qq6_A 283 RAVDYVMP 290 (410)
T ss_dssp TCCSEECC
T ss_pred CCCCEEec
Confidence 998876
No 143
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.39 E-value=1.5e-06 Score=98.84 Aligned_cols=122 Identities=13% Similarity=0.043 Sum_probs=104.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
++++|++.|+++.+.||+.|.|+.|. .+++...+++++||+++ ++++.+....+|+. ++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~----~~ 235 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDR----ET 235 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCH----HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCH----HH
Confidence 89999999999999999999998763 35888999999999987 57888887777753 56
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 229 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~V 229 (956)
++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++. ||.|
T Consensus 236 ai~~~~~l~~~~i~~iEq---------------P-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v 298 (398)
T 2pp0_A 236 AIRMGRKMEQFNLIWIEE---------------P-LDAYDIEGHAQLAAAL-DTPIATGEMLTSFREHEQLILGNASDFV 298 (398)
T ss_dssp HHHHHHHHGGGTCSCEEC---------------C-SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHHcCCceeeC---------------C-CChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 889999999999998731 1 1246899999999988 7999999999999999999987 9999
Q ss_pred EE
Q psy2378 230 ML 231 (956)
Q Consensus 230 mi 231 (956)
++
T Consensus 299 ~i 300 (398)
T 2pp0_A 299 QP 300 (398)
T ss_dssp CC
T ss_pred Ee
Confidence 87
No 144
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.37 E-value=2e-06 Score=97.98 Aligned_cols=153 Identities=11% Similarity=0.059 Sum_probs=119.6
Q ss_pred CCCCEEEEe-cCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEE
Q psy2378 62 EEHPIAFQV-GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 138 (956)
Q Consensus 62 ~~~p~~vQl-~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 138 (956)
+.-|+-..+ ...+|+++++.|+.+.+.||+.|.|++|++-. + |+ ++++...+++++||+++ ++++.|.
T Consensus 166 ~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vD 236 (412)
T 3stp_A 166 DRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLE 236 (412)
T ss_dssp SSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 444555553 45789999999999999999999999988521 1 22 46788899999999998 5788888
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
...+|+. ++++++++.|++.|+++|.- ..++.+++..+++++.+ ++||++.+.+.++++
T Consensus 237 aN~~~~~----~~Ai~~~~~Le~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 295 (412)
T 3stp_A 237 CYMGWNL----DYAKRMLPKLAPYEPRWLEE----------------PVIADDVAGYAELNAMN-IVPISGGEHEFSVIG 295 (412)
T ss_dssp CTTCSCH----HHHHHHHHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHH
T ss_pred CCCCCCH----HHHHHHHHHHHhcCCCEEEC----------------CCCcccHHHHHHHHhCC-CCCEEeCCCCCCHHH
Confidence 8777763 56889999999999999841 11245899999999987 799999999999999
Q ss_pred HHHHhhh--cCEEEEccccccCCcchHH
Q psy2378 219 IDLHLNY--IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 219 a~~~l~~--ad~VmiGR~~l~~P~l~~~ 244 (956)
++++++. ||.|++--+-.+...=..+
T Consensus 296 ~~~li~~~a~D~v~ik~~~~GGit~a~k 323 (412)
T 3stp_A 296 CAELINRKAVSVLQYDTNRVGGITAAQK 323 (412)
T ss_dssp HHHHHHTTCCSEECCCHHHHTHHHHHHH
T ss_pred HHHHHHcCCCCEEecChhhcCCHHHHHH
Confidence 9999986 9999875444444333333
No 145
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.36 E-value=1.8e-06 Score=98.69 Aligned_cols=135 Identities=18% Similarity=0.182 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecC------CCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCC
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNC------GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 145 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~------gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 145 (956)
++++|+++|+++.+.||+.|.|+. |++... ...|....++++...+++++||+++ ++++.+....+|+
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~- 227 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQ---NLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTD- 227 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCS---CCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccC---cccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCC-
Confidence 899999999999999999999986 543111 1122222356788999999999988 4778877766665
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 146 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
.++++++++.|++.|+++|.- . .++.+|+..+++++.+ ++||++.+.+.++++++++++.
T Consensus 228 ---~~~a~~~~~~l~~~~i~~iE~---------------P-~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 287 (407)
T 2o56_A 228 ---TTSAIQFGRMIEELGIFYYEE---------------P-VMPLNPAQMKQVADKV-NIPLAAGERIYWRWGYRPFLEN 287 (407)
T ss_dssp ---HHHHHHHHHHHGGGCCSCEEC---------------S-SCSSSHHHHHHHHHHC-CSCEEECTTCCHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHhcCCCEEeC---------------C-CChhhHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHc
Confidence 356889999999999998741 0 2346899999999998 7999999999999999999987
Q ss_pred --cCEEEEc
Q psy2378 226 --IDGVMLG 232 (956)
Q Consensus 226 --ad~VmiG 232 (956)
||.|++=
T Consensus 288 ~~~d~v~ik 296 (407)
T 2o56_A 288 GSLSVIQPD 296 (407)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEecC
Confidence 9998873
No 146
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.35 E-value=1.7e-06 Score=115.03 Aligned_cols=200 Identities=11% Similarity=0.018 Sum_probs=133.3
Q ss_pred CCceEEccCc-CcCCHHHHHHHHHcCCCcEE-EecccccccccCCchhccccCCCCCCEEEEecCCCHHH---HHHHHHH
Q psy2378 10 KRKISIAPMM-NLTDRHCRMFHRQITRYSWL-YTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKK---LAKSAKI 84 (956)
Q Consensus 10 ~~~i~lAPM~-~~td~~fR~~~~~~g~~~l~-~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~---~~~aA~~ 84 (956)
+.||+.|||. ++|+..+---+...||.+.+ =..+.+.+.+...-.++....+.++|+++.+.-.+|+. +.+..+.
T Consensus 582 ~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~ 661 (2060)
T 2uva_G 582 VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGR 661 (2060)
T ss_dssp SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHH
T ss_pred cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHH
Confidence 5599999999 78999887777778864433 12333333332111122223334789999998766653 4466677
Q ss_pred HHHcCCCE--EEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHc
Q psy2378 85 IQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSA 162 (956)
Q Consensus 85 ~~~~G~d~--IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~ 162 (956)
+.+.|++. |.+.+|.|. ++ ++++.+++ .++++.. +-.+. .+..+.+..++++
T Consensus 662 ~~~~gv~i~gv~~~~G~p~---------------~e---~~~~~l~~-~gi~~i~-~v~~~------~~a~~~v~~l~~a 715 (2060)
T 2uva_G 662 LRADGVPIEGLTIGAGVPS---------------IE---VANEYIQT-LGIRHIS-FKPGS------VDAIQQVINIAKA 715 (2060)
T ss_dssp HHTTTCCEEEEEEESSCCC---------------HH---HHHHHHHH-SCCSEEE-ECCCS------HHHHHHHHHHHHH
T ss_pred HHHcCCCcceEeecCCCCC---------------HH---HHHHHHHH-cCCeEEE-ecCCH------HHHHHHHHHHHHc
Confidence 78889988 888877662 22 33344443 3777763 32222 3466777888999
Q ss_pred CCCEEE---EcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHh-----------hh-cC
Q psy2378 163 GCRTFI---VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL-----------NY-ID 227 (956)
Q Consensus 163 G~~~i~---vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l-----------~~-ad 227 (956)
|+|+|. +.|... .|..+... ....-+..+.+|++.+ +||||+.|||.+++++.++| .. ||
T Consensus 716 G~D~iV~~q~~G~ea--GGH~g~~d--~~~~~l~lv~~i~~~~-~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAd 790 (2060)
T 2uva_G 716 NPTFPIILQWTGGRG--GGHHSFED--FHQPILLMYSRIRKCS-NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFD 790 (2060)
T ss_dssp CTTSCEEEEECCTTS--SSSCCSCC--SHHHHHHHHHHHHTST-TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCS
T ss_pred CCCEEEEeeeEcccC--CCCCCccc--ccchHHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCC
Confidence 999999 665431 23222110 0012357889999987 79999999999999999999 65 99
Q ss_pred EEEEccccccCCc
Q psy2378 228 GVMLGREAYKNPF 240 (956)
Q Consensus 228 ~VmiGR~~l~~P~ 240 (956)
+|++|+.++.-+.
T Consensus 791 gV~~GT~f~~t~E 803 (2060)
T 2uva_G 791 GCMFGSRMMTAKE 803 (2060)
T ss_dssp CEEESGGGGGBTT
T ss_pred EEEEchhhhcCcC
Confidence 9999999887654
No 147
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.35 E-value=3.4e-06 Score=87.31 Aligned_cols=135 Identities=15% Similarity=0.305 Sum_probs=93.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 141 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 141 (956)
.+.|++..|.+.+++++.+.++.+.+.|++.|++...+|.. .+.++.+++.++.|+.+....
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~------------------~~~i~~i~~~~~~~l~vg~g~ 66 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW------------------EQSIPAIVDAYGDKALIGAGT 66 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH------------------HHHHHHHHHHHTTTSEEEEEC
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHhCCCCeEEEecc
Confidence 47899999999999999999999999999999998766521 123344444444555442211
Q ss_pred CCCCCCcHHHHHHHHHHH-----------------------------------------HHcCCCEEEEcccccccccCC
Q psy2378 142 GIDDINSYDFVRDFVGTV-----------------------------------------SSAGCRTFIVHARNAFLKKLN 180 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l-----------------------------------------~~~G~~~i~vh~r~~~~~g~~ 180 (956)
-.+ .+.++.+ .+.|+|+|.++..
T Consensus 67 ~~~--------~~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t-------- 130 (212)
T 2v82_A 67 VLK--------PEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPS-------- 130 (212)
T ss_dssp CCS--------HHHHHHHHHTTCCEEECSSCCHHHHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTH--------
T ss_pred ccC--------HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecC--------
Confidence 000 0112233 3344444444221
Q ss_pred CCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccC
Q psy2378 181 PKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN 238 (956)
Q Consensus 181 ~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~ 238 (956)
.+..++.++++++.++ ++||++.|||+ ++++.++++. ||+|.+|++++..
T Consensus 131 -------~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 131 -------SAFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp -------HHHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred -------CCCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 1235788899988775 59999999997 9999999988 9999999999876
No 148
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.33 E-value=2.8e-06 Score=97.46 Aligned_cols=149 Identities=13% Similarity=0.064 Sum_probs=116.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccc-cccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGA-ILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~-~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
.+|+++++.|+.+.+.||+.|-++.|||.... .|. ...++++...+++++||+++ ++++.+....+|+.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~---- 216 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTT---- 216 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCH----
Confidence 68999999999999999999999999996532 222 22346788899999999998 46777776666653
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++++.|++.|+++|.- ..++.+++..+++++.+ ++||++.+.+.++++++++++. +|
T Consensus 217 ~~A~~~~~~Le~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~g~~D 279 (433)
T 3rcy_A 217 AGAIRLGQAIEPYSPLWYEE----------------PVPPDNVGAMAQVARAV-RIPVATGERLTTKAEFAPVLREGAAA 279 (433)
T ss_dssp HHHHHHHHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHHS-SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhhhcCCCEEEC----------------CCChhhHHHHHHHHhcc-CCCEEecCCCCCHHHHHHHHHcCCCC
Confidence 56889999999999999841 12245899999999998 7999999999999999999986 99
Q ss_pred EEEEccccccCCcchHHHH
Q psy2378 228 GVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 228 ~VmiGR~~l~~P~l~~~i~ 246 (956)
.|++--+-.+...=..++.
T Consensus 280 ~v~~d~~~~GGit~~~kia 298 (433)
T 3rcy_A 280 ILQPALGRAGGIWEMKKVA 298 (433)
T ss_dssp EECCCHHHHTHHHHHHHHH
T ss_pred EEEeCchhcCCHHHHHHHH
Confidence 9887544444444334443
No 149
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.33 E-value=1.9e-06 Score=97.59 Aligned_cols=123 Identities=13% Similarity=0.116 Sum_probs=104.2
Q ss_pred CCH---HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCC
Q psy2378 73 NEP---KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDIN 147 (956)
Q Consensus 73 ~~~---~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~ 147 (956)
.++ +++++.|+++.+.||+.|.|+.|+ .+++...+++++||+++ ++++.+....+|+.
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~-- 197 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMILDANQSYDA-- 197 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH--
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCH--
Confidence 678 999999999999999999999876 24788899999999988 57888887767753
Q ss_pred cHHHHHHHHHHHHHc-CCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-
Q psy2378 148 SYDFVRDFVGTVSSA-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 225 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~-G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~- 225 (956)
++++++++.|++. |+++|. +. .++.+|+..+++++.+ ++||++.+.+.++++++++++.
T Consensus 198 --~~a~~~~~~l~~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 258 (382)
T 2gdq_A 198 --AAAFKWERYFSEWTNIGWLE---------------EP-LPFDQPQDYAMLRSRL-SVPVAGGENMKGPAQYVPLLSQR 258 (382)
T ss_dssp --HHHHTTHHHHTTCSCEEEEE---------------CC-SCSSCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHTT
T ss_pred --HHHHHHHHHHhhccCCeEEE---------------CC-CCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcC
Confidence 5688999999999 988873 11 1246899999999988 7999999999999999999986
Q ss_pred -cCEEEE
Q psy2378 226 -IDGVML 231 (956)
Q Consensus 226 -ad~Vmi 231 (956)
||.|++
T Consensus 259 ~~d~v~i 265 (382)
T 2gdq_A 259 CLDIIQP 265 (382)
T ss_dssp CCSEECC
T ss_pred CCCEEec
Confidence 999887
No 150
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.31 E-value=7.1e-06 Score=91.59 Aligned_cols=130 Identities=14% Similarity=0.125 Sum_probs=104.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEecc
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRI 141 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~ 141 (956)
-|+-..+.+.+++++++.|+++.+.||+.|.|+.|+ +++...+++++||++ + +++.+....
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~-g~~~~l~vDan~ 191 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKV-TRGAKYIVDANM 191 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHH-STTCEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhh-CCCCeEEEECCC
Confidence 344455667899999999999999999999998774 477778899999988 5 445444444
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCC--EEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCR--TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~--~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
+|+ .++++++++.|++.|++ +|. +. .++.+|+..+++++.+ ++||++.+.+.+++++
T Consensus 192 ~~~----~~~a~~~~~~l~~~~i~~~~iE---------------~P-~~~~~~~~~~~l~~~~-~ipia~dE~~~~~~~~ 250 (345)
T 2zad_A 192 GYT----QKEAVEFARAVYQKGIDIAVYE---------------QP-VRREDIEGLKFVRFHS-PFPVAADESARTKFDV 250 (345)
T ss_dssp CSC----HHHHHHHHHHHHHTTCCCSEEE---------------CC-SCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHH
T ss_pred CCC----HHHHHHHHHHHHhcCCCeeeee---------------CC-CCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHH
Confidence 453 45688999999999999 763 11 1246899999999988 7999999999999999
Q ss_pred HHHhhh--cCEEEE
Q psy2378 220 DLHLNY--IDGVML 231 (956)
Q Consensus 220 ~~~l~~--ad~Vmi 231 (956)
+++++. +|.|++
T Consensus 251 ~~~i~~~~~d~v~i 264 (345)
T 2zad_A 251 MRLVKEEAVDYVNI 264 (345)
T ss_dssp HHHHHHTCCSEEEE
T ss_pred HHHHHhCCCCEEEE
Confidence 999987 999998
No 151
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.31 E-value=7.3e-06 Score=88.50 Aligned_cols=144 Identities=19% Similarity=0.203 Sum_probs=93.0
Q ss_pred HHHHHHHHcCCCEEEe--cCCCCcceeeeCcccc-cccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHH
Q psy2378 80 KSAKIIQKWGYDEINL--NCGCPSNRVQNGFFGA-ILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFV 156 (956)
Q Consensus 80 ~aA~~~~~~G~d~Iei--N~gCP~~~~~~~~~G~-~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a 156 (956)
+.|+..+++|+++|-+ |..|+... +|+ ....+++. ++++++.+++||.+|.+.+. .+.+
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~-----~~g~~R~~~~~~----i~~i~~~v~iPvl~k~~i~~---------ide~ 93 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRN-----TDGVARSVDPLK----IEEIRKCISINVLAKVRIGH---------FVEA 93 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC----------CCCCCCCCCHHH----HHHHHTTCCSEEEEEEETTC---------HHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchh-----cCCcccCCCHHH----HHHHHHhcCCCEEEeccCCc---------HHHH
Confidence 4467788899998765 56666422 333 44455554 66678889999999988753 2345
Q ss_pred HHHHHcCCCEEEEccc-cc-------------------------------------ccccC--CCC--------------
Q psy2378 157 GTVSSAGCRTFIVHAR-NA-------------------------------------FLKKL--NPK-------------- 182 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r-~~-------------------------------------~~~g~--~~~-------------- 182 (956)
+.++++|+|.|..+.. +. ..+|. +|.
T Consensus 94 qil~aaGAD~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~e 173 (297)
T 4adt_A 94 QILEELKVDMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNE 173 (297)
T ss_dssp HHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhh
Confidence 5666777777742210 00 00000 000
Q ss_pred ---------CCC----CCCcCcHHHHHHHHHhCCCceEE--EecCCCCHHHHHHHhhh-cCEEEEccccccCCcch
Q psy2378 183 ---------QNR----KIPILKYNFVYNLKKDFPELEII--INGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 183 ---------~~~----~~~~~~~~~i~~v~~~~~~ipVi--~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
.+- .....+|+.+.++++.+ ++||+ +.|||.+++++.++++. ||+|++|++++..++..
T Consensus 174 ir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~ 248 (297)
T 4adt_A 174 IKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK-RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQ 248 (297)
T ss_dssp HHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT-SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHH
T ss_pred hhhhccccccccccccccCCCCHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHH
Confidence 000 00135788899999887 68886 99999999999999988 99999999999855543
No 152
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.30 E-value=6.7e-06 Score=86.88 Aligned_cols=155 Identities=13% Similarity=0.273 Sum_probs=106.4
Q ss_pred CCCEEEEecCC--CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc-cCccEEEEe
Q psy2378 63 EHPIAFQVGDN--EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEIDITVKH 139 (956)
Q Consensus 63 ~~p~~vQl~g~--~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKi 139 (956)
..++-+|+.|. +.++ ++.+-++|+|-|=|| +...++|+++.++.+..-.. +-.-+.+|.
T Consensus 73 ~~~~pl~vGGGIrs~e~----~~~~l~~GadkVii~--------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~ 134 (243)
T 4gj1_A 73 EVSVNLQVGGGIRSKEE----VKALLDCGVKRVVIG--------------SMAIKDATLCLEILKEFGSEAIVLALDTIL 134 (243)
T ss_dssp HCCSEEEEESSCCCHHH----HHHHHHTTCSEEEEC--------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred hcCCCeEeccccccHHH----HHHHHHcCCCEEEEc--------------cccccCCchHHHHHhcccCceEEEEEEEEe
Confidence 45567999874 4443 344556799999885 55678999999999887533 233344443
Q ss_pred cc-------CCCCCCcHHHHHHHHHHHHHcCCCEEEEc--ccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe
Q psy2378 140 RI-------GIDDINSYDFVRDFVGTVSSAGCRTFIVH--ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 210 (956)
Q Consensus 140 r~-------g~~~~~~~~~~~~~a~~l~~~G~~~i~vh--~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n 210 (956)
.- ||...... ++.++++.+++.|+..|.++ .|.+..+| .|++.++++++.++++|||++
T Consensus 135 ~~~~~v~~~gw~~~~~~-~~~~~~~~~~~~g~~eil~t~Id~DGt~~G-----------~d~~l~~~l~~~~~~ipvias 202 (243)
T 4gj1_A 135 KEDYVVAVNAWQEASDK-KLMEVLDFYSNKGLKHILCTDISKDGTMQG-----------VNVRLYKLIHEIFPNICIQAS 202 (243)
T ss_dssp SSSEEEC--------CC-BHHHHHHHHHTTTCCEEEEEETTC-----C-----------CCHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCEEEecCceecccc-hHHHHHHHHhhcCCcEEEeeeecccccccC-----------CCHHHHHHHHHhcCCCCEEEE
Confidence 22 45443322 36789999999999999987 44443333 599999999998878999999
Q ss_pred cCCCCHHHHHHHhhhcCEEEEccccccCCcchHHHHH
Q psy2378 211 GGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 211 GgI~s~~da~~~l~~ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
||+.+.+|.+++-..++||.+|++++.+--=++++++
T Consensus 203 GGv~~~~Dl~~l~~~~~gvivg~Al~~g~i~l~ea~~ 239 (243)
T 4gj1_A 203 GGVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIR 239 (243)
T ss_dssp SCCCSHHHHHHTTTTCSEEEECHHHHTTSSCHHHHHH
T ss_pred cCCCCHHHHHHHHccCchhehHHHHHCCCCCHHHHHH
Confidence 9999999998863339999999987665544444443
No 153
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.30 E-value=3.8e-06 Score=90.00 Aligned_cols=170 Identities=11% Similarity=0.170 Sum_probs=106.3
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCc------cccccc--CChHHHHHHHHHHhhccC
Q psy2378 63 EHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGF------FGAILM--TKPLLVSDCIKAMRDSVE 132 (956)
Q Consensus 63 ~~p~~vQl~g~~~--~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~------~G~~l~--~~~~~~~eiv~~v~~~~~ 132 (956)
+..++.-|...+| +.+.+.++.+.++|+|.||++.-++-|.. +| .-.++. -+++...++++++|+.++
T Consensus 17 ~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~--dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~ 94 (262)
T 1rd5_A 17 KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYI--DGPIIQASVARALASGTTMDAVLEMLREVTPELS 94 (262)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT--SCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCS
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccc--CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 4457778877776 88999999999999999999865532211 10 000011 268888999999999999
Q ss_pred ccEEEEeccC--------------CC----CCCcHHHHHHHHHHHHHcCCCEEEE-ccccc------------------c
Q psy2378 133 IDITVKHRIG--------------ID----DINSYDFVRDFVGTVSSAGCRTFIV-HARNA------------------F 175 (956)
Q Consensus 133 ~pv~vKir~g--------------~~----~~~~~~~~~~~a~~l~~~G~~~i~v-h~r~~------------------~ 175 (956)
+|+.+-.+.+ .+ .+.+.++..++.+.+.+.|.+.+.+ ...+. .
T Consensus 95 ~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s 174 (262)
T 1rd5_A 95 CPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVS 174 (262)
T ss_dssp SCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEEC
T ss_pred CCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEec
Confidence 9988753221 00 0001112333344444444432221 11110 0
Q ss_pred cccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 176 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
..|++|.... ..+...+.++++++.. ++||++.|||+|++++.++++. ||+|.+|.++.
T Consensus 175 ~~G~tG~~~~-~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~ 234 (262)
T 1rd5_A 175 VNGVTGPRAN-VNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMV 234 (262)
T ss_dssp SSCCBCTTSC-BCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCCCCCcC-CCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHH
Confidence 1122222111 1233457899999887 7999999999999999999987 99999999854
No 154
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.28 E-value=2.5e-06 Score=97.92 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=104.0
Q ss_pred CCCH-HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCc
Q psy2378 72 DNEP-KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINS 148 (956)
Q Consensus 72 g~~~-~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~ 148 (956)
..++ +++++.|+++.+.||+.|.|+.|+ +++...+++++||+++ ++++.+....+|+
T Consensus 182 ~~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~---- 241 (428)
T 3bjs_A 182 GYQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYT---- 241 (428)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCC----
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCC----
Confidence 3678 999999999999999999998775 4788899999999987 4777777666664
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCC-ceEEEecCCCCHHHHHHHhhh--
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKKEIDLHLNY-- 225 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~-ipVi~nGgI~s~~da~~~l~~-- 225 (956)
.++++++++.|++.|+++|.- . .++.+|+..+++++.+ + +||++.+.+.++++++++++.
T Consensus 242 ~~eai~~~~~L~~~~i~~iEq---------------P-~~~~d~~~~~~l~~~~-~~iPIa~dE~~~~~~~~~~~i~~~~ 304 (428)
T 3bjs_A 242 MADARRVLPVLAEIQAGWLEE---------------P-FACNDFASYREVAKIT-PLVPIAAGENHYTRFEFGQMLDAGA 304 (428)
T ss_dssp HHHHHHHHHHHHHTTCSCEEC---------------C-SCTTCHHHHHHHTTTC-SSSCEEECTTCCSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCCEEEC---------------C-CCccCHHHHHHHHHhC-CCCcEEcCCCcCCHHHHHHHHHhCC
Confidence 356889999999999998731 1 1246899999999887 7 999999999999999999986
Q ss_pred cCEEEEc
Q psy2378 226 IDGVMLG 232 (956)
Q Consensus 226 ad~VmiG 232 (956)
+|+|++=
T Consensus 305 ~d~v~ik 311 (428)
T 3bjs_A 305 VQVWQPD 311 (428)
T ss_dssp EEEECCB
T ss_pred CCEEEeC
Confidence 9998873
No 155
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.28 E-value=2.6e-06 Score=96.07 Aligned_cols=130 Identities=12% Similarity=0.114 Sum_probs=108.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
+++++++.|+.+.+.||+.|.|+.||+ | .+++...+++++||+++ +.++.+....+|++ .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d---~~~ 209 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHT---CGH 209 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCS---HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HHH
Confidence 449999999999999999999999986 2 25888999999999997 57888888878872 246
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 229 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~V 229 (956)
++++++.|++.|+++|.= ..++.+++..+++++.+ ++||++.+.+.++++++++++. +|.|
T Consensus 210 A~~~~~~l~~~~i~~iEq----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v 272 (374)
T 3sjn_A 210 SAMMAKRLEEFNLNWIEE----------------PVLADSLISYEKLSRQV-SQKIAGGESLTTRYEFQEFITKSNADIV 272 (374)
T ss_dssp HHHHHHHSGGGCCSEEEC----------------SSCTTCHHHHHHHHHHC-SSEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHhhhcCceEEEC----------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 889999999999999841 02245899999999988 7999999999999999999986 9999
Q ss_pred EEccccc
Q psy2378 230 MLGREAY 236 (956)
Q Consensus 230 miGR~~l 236 (956)
++--+-.
T Consensus 273 ~~k~~~~ 279 (374)
T 3sjn_A 273 QPDITRC 279 (374)
T ss_dssp CCBTTTS
T ss_pred EeCcccc
Confidence 8744433
No 156
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.27 E-value=7.4e-07 Score=94.97 Aligned_cols=89 Identities=15% Similarity=0.189 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
+..++++.++++|+++|+++..+.... ..+.+++.++++++.+ ++||+++|+|.++++++++++. ||+|
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~---------~~~~~~~~i~~i~~~~-~ipvi~~ggI~~~~~~~~~~~~Gad~V 100 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVE---------KRKTMLELVEKVAEQI-DIPFTVGGGIHDFETASELILRGADKV 100 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSS---------HHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhc---------CCcccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 367899999999999999997652110 1135788999999887 7999999999999999999988 9999
Q ss_pred EEccccccCCcchHHHHHhh
Q psy2378 230 MLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 230 miGR~~l~~P~l~~~i~~~~ 249 (956)
++|+.++.||+++.++.+.+
T Consensus 101 ~lg~~~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 101 SINTAAVENPSLITQIAQTF 120 (253)
T ss_dssp EESHHHHHCTHHHHHHHHHH
T ss_pred EEChHHHhChHHHHHHHHHc
Confidence 99999999999998887643
No 157
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.25 E-value=6.2e-06 Score=88.56 Aligned_cols=166 Identities=16% Similarity=0.177 Sum_probs=109.2
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCccccccc----------CChHHHHHHHHHHhhc
Q psy2378 63 EHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM----------TKPLLVSDCIKAMRDS 130 (956)
Q Consensus 63 ~~p~~vQl~g~~~--~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~ 130 (956)
+..++..|...+| +.+.+.++.+.++|+|+|||+. |...-.-| |-... -+.....++++++|+.
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~--P~sdp~~D--G~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV--PFSDPLAD--GPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCSCCTTC--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC--CCCCccCC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 4457888887777 8999999999999999999964 32110001 00000 1456677999999998
Q ss_pred -cCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc-----------------------------------
Q psy2378 131 -VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA----------------------------------- 174 (956)
Q Consensus 131 -~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~----------------------------------- 174 (956)
+++|+.+=...+.-... ...++++.+.++|+|.+++|.-+.
T Consensus 92 ~~~~Pv~lm~y~n~v~~~---g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~ 168 (268)
T 1qop_A 92 HPTIPIGLLMYANLVFNN---GIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVAS 168 (268)
T ss_dssp CSSSCEEEEECHHHHHTT---CHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHH
T ss_pred CCCCCEEEEEcccHHHHh---hHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHh
Confidence 79998661111100000 024677788888888887752110
Q ss_pred ---------ccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc
Q psy2378 175 ---------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 237 (956)
Q Consensus 175 ---------~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~ 237 (956)
...|++|.... ..+...++++++++.. ++||+..|||.+++++.+++.. ||+|++|+++..
T Consensus 169 ~~~g~v~~~s~~G~tG~~~~-~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 169 YGRGYTYLLSRSGVTGAENR-GALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp HCCSCEEEESSSSCCCSSSC-C--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hCCCcEEEEecCCcCCCccC-CCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 01123332111 1233478999999987 7999999999999999997766 999999998653
No 158
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.25 E-value=5.5e-06 Score=94.23 Aligned_cols=150 Identities=10% Similarity=0.092 Sum_probs=117.8
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEE
Q psy2378 61 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 138 (956)
Q Consensus 61 ~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 138 (956)
.+.-|+-..+.+.+|+++++.|+.+.+.||..|-+ .|+|.... .....+++...+++++||+++ ++++.+.
T Consensus 112 r~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vD 184 (405)
T 3rr1_A 112 RDKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLD 184 (405)
T ss_dssp CSCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEE
T ss_pred cCceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEE
Confidence 34566777888899999999999999999999999 88873211 112234677789999999998 5678887
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
...+|+. ++++++++.|++.|+++|.- . .++.+++..+++++.+ ++||++.+.+.++++
T Consensus 185 aN~~~~~----~~A~~~~~~L~~~~i~~iEe---------------P-~~~~d~~~~~~l~~~~-~iPIa~dE~i~~~~~ 243 (405)
T 3rr1_A 185 FHGRVSA----PMAKVLIKELEPYRPLFIEE---------------P-VLAEQAETYARLAAHT-HLPIAAGERMFSRFD 243 (405)
T ss_dssp CCSCBCH----HHHHHHHHHHGGGCCSCEEC---------------S-SCCSSTHHHHHHHTTC-SSCEEECTTCCSHHH
T ss_pred CCCCCCH----HHHHHHHHHHHhcCCCEEEC---------------C-CCcccHHHHHHHHhcC-CCCEEecCCcCCHHH
Confidence 7767753 56889999999999998841 0 1245889999999987 799999999999999
Q ss_pred HHHHhhh--cCEEEEccccccC
Q psy2378 219 IDLHLNY--IDGVMLGREAYKN 238 (956)
Q Consensus 219 a~~~l~~--ad~VmiGR~~l~~ 238 (956)
++++++. ||.|++--+-.+.
T Consensus 244 ~~~~l~~~a~d~v~~d~~~~GG 265 (405)
T 3rr1_A 244 FKRVLEAGGVSILQPDLSHAGG 265 (405)
T ss_dssp HHHHHHHCCCSEECCBTTTTTH
T ss_pred HHHHHHHhCCCeEEEChhhcCC
Confidence 9999986 9998874444333
No 159
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.21 E-value=1.7e-05 Score=89.69 Aligned_cols=148 Identities=10% Similarity=0.121 Sum_probs=119.6
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
-|+...+...+++++++.|+.+.+. ||..+-+..|++ +++.-.+++++||+++ +.++.+...
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 4555677788999999888877666 999999998763 4677789999999998 478888888
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. +++.++++.|++.|+++|. + ..++.+|+..+++++.. ++||++.+.+.++++++
T Consensus 203 ~~~~~----~~A~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 261 (383)
T 3i4k_A 203 ARWDR----RTALHYLPILAEAGVELFE--------Q--------PTPADDLETLREITRRT-NVSVMADESVWTPAEAL 261 (383)
T ss_dssp TCSCH----HHHHHHHHHHHHTTCCEEE--------S--------CSCTTCHHHHHHHHHHH-CCEEEESTTCSSHHHHH
T ss_pred CCCCH----HHHHHHHHHHHhcCCCEEE--------C--------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHH
Confidence 88864 4688999999999999984 1 12346899999999987 69999999999999999
Q ss_pred HHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 221 LHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 221 ~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
++++. +|.|++--+-++...=..++..
T Consensus 262 ~~i~~~~~d~v~~k~~~~GGit~~~~ia~ 290 (383)
T 3i4k_A 262 AVVKAQAADVIALKTTKHGGLLESKKIAA 290 (383)
T ss_dssp HHHHHTCCSEEEECTTTTTSHHHHHHHHH
T ss_pred HHHHcCCCCEEEEcccccCCHHHHHHHHH
Confidence 99986 9999997666666555555543
No 160
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.20 E-value=5.4e-06 Score=94.37 Aligned_cols=164 Identities=10% Similarity=0.028 Sum_probs=123.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceee------eCccccccc--CChHHHHHHHHHHhhcc--
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ------NGFFGAILM--TKPLLVSDCIKAMRDSV-- 131 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~------~~~~G~~l~--~~~~~~~eiv~~v~~~~-- 131 (956)
+.-|+-..+.+.+|+++++.|+.+.+.||..|-+..|++-.... ...-|..+. +.++...+++++||+++
T Consensus 121 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~ 200 (401)
T 3sbf_A 121 DAIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN 200 (401)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC
Confidence 44566667778999999999999999999999999997521100 001122221 22678889999999998
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
++++.+....+|+. ++++++++.|++.|+++|.- . .++.+++..+++++.+ ++||++.+
T Consensus 201 d~~l~vDan~~~~~----~~A~~~~~~L~~~~i~~iEq---------------P-~~~~~~~~~~~l~~~~-~iPIa~dE 259 (401)
T 3sbf_A 201 QFHILHDVHERLFP----NQAIQFAKEVEQYKPYFIED---------------I-LPPNQTEWLDNIRSQS-SVSLGLGE 259 (401)
T ss_dssp SSEEEEECTTCSCH----HHHHHHHHHHGGGCCSCEEC---------------S-SCTTCGGGHHHHHTTC-CCCEEECT
T ss_pred CCEEEEECCCCCCH----HHHHHHHHHHHhcCCCEEEC---------------C-CChhHHHHHHHHHhhC-CCCEEeCC
Confidence 57888888877863 56889999999999998841 0 1245788899999987 79999999
Q ss_pred CCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 212 GIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 212 gI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
.+.++++++++++. ||.|++--+-.+...=..++.
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia 296 (401)
T 3sbf_A 260 LFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLG 296 (401)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHH
T ss_pred ccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHH
Confidence 99999999999986 999988665555555444444
No 161
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.20 E-value=1.2e-06 Score=93.31 Aligned_cols=89 Identities=13% Similarity=0.200 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
+..++++.++++|+++|+++..... + ...+.+++.++++++.+ ++||+++|+|.++++++++++. ||+|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~--~-------~~~~~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad~V 101 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISAT--H-------EERAILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGADKV 101 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSS--T-------TCHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCcc--c-------cCccccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 3678999999999999999865420 0 11235788899999987 8999999999999999999998 9999
Q ss_pred EEccccccCCcchHHHHHhh
Q psy2378 230 MLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 230 miGR~~l~~P~l~~~i~~~~ 249 (956)
++|+.++.||+++.++.+.+
T Consensus 102 ~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 102 SVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp EECHHHHHCTHHHHHHHHHH
T ss_pred EEChHHHhCcHHHHHHHHHc
Confidence 99999999999998887643
No 162
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.20 E-value=7.2e-06 Score=93.41 Aligned_cols=150 Identities=11% Similarity=0.042 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccc-cCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
.+|+++++.|+.+.+.||..|-++.|+|.. ...|... ..+++...+++++||+++ +.++.+....+|+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~---- 221 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTV---- 221 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCH----
Confidence 589999999999988999999999998753 1112211 224677889999999998 46788777767753
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++++.|++.|+++|.- . .++.+++..+++++.+ ++||++.+.+.++++++++++. +|
T Consensus 222 ~~A~~~~~~l~~~~i~~iEe---------------P-~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d 284 (404)
T 4e5t_A 222 SGAKRLARRLEAYDPLWFEE---------------P-IPPEKPEDMAEVARYT-SIPVATGERLCTKYEFSRVLETGAAS 284 (404)
T ss_dssp HHHHHHHHHHGGGCCSEEEC---------------C-SCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHhhcCCcEEEC---------------C-CCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 56889999999999999841 0 2245899999999998 7999999999999999999986 99
Q ss_pred EEEEccccccCCcchHHHHH
Q psy2378 228 GVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 228 ~VmiGR~~l~~P~l~~~i~~ 247 (956)
.|++--+-.+...=..++.+
T Consensus 285 ~v~~d~~~~GGit~~~~ia~ 304 (404)
T 4e5t_A 285 ILQMNLGRVGGLLEAKKIAA 304 (404)
T ss_dssp EECCCTTTSSCHHHHHHHHH
T ss_pred EEecCccccCCHHHHHHHHH
Confidence 99886655555554444443
No 163
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.20 E-value=2e-05 Score=83.08 Aligned_cols=160 Identities=9% Similarity=0.074 Sum_probs=103.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCC--hHHHHHHHHHHhhccCccEEEEeccCCCC------
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTK--PLLVSDCIKAMRDSVEIDITVKHRIGIDD------ 145 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~--~~~~~eiv~~v~~~~~~pv~vKir~g~~~------ 145 (956)
.+++..+.++.+.+.|.|+|.| | +.--. .+.+.++++++|+.+++|+..|.-+++.+
T Consensus 51 ~~~~~~~~~~~~~~sGtDai~V--------------G-S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i~~ 115 (286)
T 3vk5_A 51 PVTEAVEKAAELTRLGFAAVLL--------------A-STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVVR 115 (286)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--------------E-CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCCCT
T ss_pred CcHHHHHHHHHHHhcCCCEEEE--------------c-cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccc
Confidence 4677777888888999999998 3 33234 67889999999998899999987632211
Q ss_pred ------------CCcHHHHHH------HHHHH----HHcC----CCEEEEccc-cc-ccccCCC---CCC----------
Q psy2378 146 ------------INSYDFVRD------FVGTV----SSAG----CRTFIVHAR-NA-FLKKLNP---KQN---------- 184 (956)
Q Consensus 146 ------------~~~~~~~~~------~a~~l----~~~G----~~~i~vh~r-~~-~~~g~~~---~~~---------- 184 (956)
......... .|..+ ++.| -.+|.|... +. ...+..+ .+.
T Consensus 116 ~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~g 195 (286)
T 3vk5_A 116 GADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVA 195 (286)
T ss_dssp TCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHH
Confidence 111111111 11123 4455 112223322 10 0000000 000
Q ss_pred -----------CCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccC--CcchHHHHHh
Q psy2378 185 -----------RKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN--PFLMSNFDLN 248 (956)
Q Consensus 185 -----------~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~--P~l~~~i~~~ 248 (956)
....+.+.+.++++++.+. ++||+..|||.|+++++++++. ||+|.+|.+++.| |.+++++...
T Consensus 196 ad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~e~a~~ 274 (286)
T 3vk5_A 196 RAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEIAGR 274 (286)
T ss_dssp HHTTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHHHHHC-
T ss_pred HHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHHHHHHh
Confidence 0013457789999999874 6999999999999999999987 9999999999999 7787777643
No 164
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.18 E-value=6.3e-06 Score=95.11 Aligned_cols=127 Identities=12% Similarity=0.074 Sum_probs=103.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
+.+++++++.|+++.+.||+.|.|+.|+ +++...+++++||+++ ++++.+....+|+ .
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~----~ 255 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWD----V 255 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCC----H
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC----H
Confidence 4589999999999999999999998763 3788889999999988 4677776666664 3
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++++.|++.|+++|.- . .++.+|+..+++++.+.++||++.+.+.++++++++++. ||
T Consensus 256 ~~a~~~~~~l~~~~i~~iEq---------------P-~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 319 (441)
T 2hxt_A 256 GPAIDWMRQLAEFDIAWIEE---------------P-TSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVD 319 (441)
T ss_dssp HHHHHHHHTTGGGCCSCEEC---------------C-SCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHhcCCCeeeC---------------C-CCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 56889999999999998731 1 124689999999987624999999999999999999987 99
Q ss_pred EEEEccc
Q psy2378 228 GVMLGRE 234 (956)
Q Consensus 228 ~VmiGR~ 234 (956)
.|++--.
T Consensus 320 ~v~ik~~ 326 (441)
T 2hxt_A 320 LIQIDAA 326 (441)
T ss_dssp EECCCTT
T ss_pred EEEeCcc
Confidence 9987433
No 165
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.17 E-value=1e-05 Score=91.94 Aligned_cols=136 Identities=9% Similarity=-0.002 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
+++++++.|+.+.+.||+.|.|+.|++ +++...+++++||+++ ++++.+....+|+. ++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~ 225 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNL----ET 225 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HH
Confidence 899999999999999999999998862 4788899999999988 47788777767753 56
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhh------h
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLN------Y 225 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~------~ 225 (956)
++++++.|++.|+++|. + . .++.+|+..+++++.+ ++||++.+.+.++++++++++ .
T Consensus 226 a~~~~~~l~~~~i~~iE--------q-------P-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~~~~ 288 (392)
T 1tzz_A 226 GIAYAKMLRDYPLFWYE--------E-------V-GDPLDYALQAALAEFY-PGPMATGENLFSHQDARNLLRYGGMRPD 288 (392)
T ss_dssp HHHHHHHHTTSCCSEEE--------C-------C-SCTTCHHHHHHHTTTC-CSCEEECTTCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHcCCCeec--------C-------C-CChhhHHHHHHHHhhC-CCCEEECCCCCCHHHHHHHHHcCCCccC
Confidence 88999999999999873 1 1 1246899999999988 799999999999999999987 5
Q ss_pred cCEEEEccccccCCcchHHH
Q psy2378 226 IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 226 ad~VmiGR~~l~~P~l~~~i 245 (956)
||.|++--.-++...=..++
T Consensus 289 ~d~v~ik~~~~GGit~~~~i 308 (392)
T 1tzz_A 289 RDWLQFDCALSYGLCEYQRT 308 (392)
T ss_dssp TCEECCCTTTTTCHHHHHHH
T ss_pred CcEEEECccccCCHHHHHHH
Confidence 89888754444444333333
No 166
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.15 E-value=1.7e-05 Score=84.49 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=107.8
Q ss_pred CCCCEEEEecCCCH--HHHHHHHHHHHHcCCCEEEec--CCCCcceeeeCc------cccccc--CChHHHHHHHHHHhh
Q psy2378 62 EEHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLN--CGCPSNRVQNGF------FGAILM--TKPLLVSDCIKAMRD 129 (956)
Q Consensus 62 ~~~p~~vQl~g~~~--~~~~~aA~~~~~~G~d~IeiN--~gCP~~~~~~~~------~G~~l~--~~~~~~~eiv~~v~~ 129 (956)
.+..++.-|...+| +.+.+.++.+.++|+|.|||. ++=|+- || .-.+|. -+.+.+.++++++|+
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~a----DGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~ 91 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLA----DGPVIQGANLRSLAAGTTSSDCFDIITKVRA 91 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT----CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC----CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 34568888887777 999999999999999999997 344431 21 000111 246678899999998
Q ss_pred c-cCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcc--------------------------ccc--------
Q psy2378 130 S-VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHA--------------------------RNA-------- 174 (956)
Q Consensus 130 ~-~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~--------------------------r~~-------- 174 (956)
. +++|+.+-.-.+. -.. -....+++.+.++|+|.+.++- .+.
T Consensus 92 ~~~~~Pivlm~Y~np--v~~-~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~ 168 (267)
T 3vnd_A 92 QHPDMPIGLLLYANL--VFA-NGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVS 168 (267)
T ss_dssp HCTTCCEEEEECHHH--HHH-HCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHH
T ss_pred cCCCCCEEEEecCcH--HHH-hhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHH
Confidence 7 7899876532110 000 0024567777777777766531 110
Q ss_pred ----------ccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 175 ----------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 175 ----------~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
...|.+|.... .++...+.++++++.. ++||+..|||.+++++.+.+.. ||+|.+|.+++
T Consensus 169 ~~~~gfvY~vS~~GvTG~~~~-~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 169 EQGEGYTYLLSRAGVTGTESK-AGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp HHCCSCEEESCCCCCC---------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HhCCCcEEEEecCCCCCCccC-CcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 01222332211 1223458899999876 7999999999999999977776 99999999754
No 167
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.14 E-value=5e-06 Score=95.09 Aligned_cols=161 Identities=7% Similarity=-0.000 Sum_probs=121.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccc--------------------cccCChHHHH
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGA--------------------ILMTKPLLVS 121 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~--------------------~l~~~~~~~~ 121 (956)
+.-|+-..+.+.+|+++++.|+.+.+.||..|-+..|+|..... ||. ...++++...
T Consensus 131 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~---~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~ 207 (418)
T 3r4e_A 131 DGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDA---YGVGRGKLYYEPADASLPSVTGWDTRKALNYVP 207 (418)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---------------------CCCCEEEECHHHHHHHHH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccc---ccccccccccccccccccccccccchhHHHHHH
Confidence 44555566778899999999999999999999999999753221 111 1112357788
Q ss_pred HHHHHHhhcc--CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHH
Q psy2378 122 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 199 (956)
Q Consensus 122 eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~ 199 (956)
+++++||+++ ++++.+....+|+. ++++++++.|++.|+++|.- ..++.+++..++++
T Consensus 208 ~~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEq----------------P~~~~d~~~~~~l~ 267 (418)
T 3r4e_A 208 KLFEELRKTYGFDHHLLHDGHHRYTP----QEAANLGKMLEPYQLFWLED----------------CTPAENQEAFRLVR 267 (418)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCH----HHHHHHHHHHGGGCCSEEES----------------CSCCSSGGGGHHHH
T ss_pred HHHHHHHHHcCCCCeEEEeCCCCCCH----HHHHHHHHHHHhhCCCEEEC----------------CCCccCHHHHHHHH
Confidence 9999999998 57888887777763 56889999999999999841 01245788889999
Q ss_pred HhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 200 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 200 ~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
+.+ ++||++.+.+.++++++++++. ||.|++--+-.+...=..++.
T Consensus 268 ~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia 315 (418)
T 3r4e_A 268 QHT-VTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIA 315 (418)
T ss_dssp HHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred hcC-CCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHH
Confidence 988 7999999999999999999986 999988655555444444443
No 168
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.12 E-value=3.2e-05 Score=87.61 Aligned_cols=155 Identities=8% Similarity=-0.008 Sum_probs=121.8
Q ss_pred CCCCCEEEEec---CCCHHHHHHHH-HHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--Ccc
Q psy2378 61 AEEHPIAFQVG---DNEPKKLAKSA-KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EID 134 (956)
Q Consensus 61 ~~~~p~~vQl~---g~~~~~~~~aA-~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~p 134 (956)
.+.-|+-..+. ..+|+++++.| +.+.+.||..|-+..|++.+. ...+++.-.+++++||+++ +++
T Consensus 123 r~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~ 193 (393)
T 4dwd_A 123 RTRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAV 193 (393)
T ss_dssp CSEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCC
T ss_pred CCceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCe
Confidence 34456666653 36899999999 888888999999999987532 3457888899999999997 578
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCC
Q psy2378 135 ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK 214 (956)
Q Consensus 135 v~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~ 214 (956)
+.|....+|+. ++++++++.|++.|+++|.= . .++.+++..+++++.+ ++||++.+.+.
T Consensus 194 l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEq---------------P-~~~~d~~~~~~l~~~~-~iPIa~dE~~~ 252 (393)
T 4dwd_A 194 IGFDANNGYSV----GGAIRVGRALEDLGYSWFEE---------------P-VQHYHVGAMGEVAQRL-DITVSAGEQTY 252 (393)
T ss_dssp EEEECTTCCCH----HHHHHHHHHHHHTTCSEEEC---------------C-SCTTCHHHHHHHHHHC-SSEEEBCTTCC
T ss_pred EEEECCCCCCH----HHHHHHHHHHHhhCCCEEEC---------------C-CCcccHHHHHHHHhhC-CCCEEecCCcC
Confidence 88888877864 56889999999999999841 1 2245899999999988 79999999999
Q ss_pred CHHHHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 215 TKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 215 s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
++++++++++. +|.|++--+-.+...=..++
T Consensus 253 ~~~~~~~~i~~~~d~v~~k~~~~GGit~~~~i 284 (393)
T 4dwd_A 253 TLQALKDLILSGVRMVQPDIVKMGGITGMMQC 284 (393)
T ss_dssp SHHHHHHHHHHTCCEECCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCccccCCHHHHHHH
Confidence 99999999877 99988755544444433333
No 169
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.11 E-value=7.4e-06 Score=87.44 Aligned_cols=167 Identities=13% Similarity=0.122 Sum_probs=102.6
Q ss_pred CCCEEEEecCCC--HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCc------cccccc--CChHHHHHHHHHHhhc-c
Q psy2378 63 EHPIAFQVGDNE--PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGF------FGAILM--TKPLLVSDCIKAMRDS-V 131 (956)
Q Consensus 63 ~~p~~vQl~g~~--~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~------~G~~l~--~~~~~~~eiv~~v~~~-~ 131 (956)
+..++.=|...+ .+.+.+.++.+.++|+|.|||.. |.+.-..|| .--+|. -+.+.+.++++++|+. +
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGi--PfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~ 96 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGM--PFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP 96 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 344666665555 58899999999999999999974 322111121 011111 2466788999999987 7
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEc--------------------------cccc-----------
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVH--------------------------ARNA----------- 174 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh--------------------------~r~~----------- 174 (956)
++|+.+-.-.+.-..- -...+++.+.++|+|.+.+. ..+.
T Consensus 97 ~~Pivlm~Y~n~v~~~---g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 97 ETPIGLLMYANLVYAR---GIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp TSCEEEEECHHHHHHT---CHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred CCCEEEEecCcHHHHH---hHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC
Confidence 8999875321100000 02356666666666665441 1110
Q ss_pred ---c----cccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 175 ---F----LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 175 ---~----~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
. ..|.+|.... .++...+.++++++.. ++||+..+||.+++++.+.+.. ||+|.+|.++.
T Consensus 174 ~gfiY~vs~~GvTG~~~~-~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 174 KGYTYLLSRAGVTGAETK-ANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp CSCEEECCCC---------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCeEEEEeccCCCCcccC-CchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 0 1133332111 1122347789999887 7999999999999999977776 99999999865
No 170
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.10 E-value=9.7e-06 Score=90.79 Aligned_cols=135 Identities=10% Similarity=0.069 Sum_probs=111.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
.-|+..++...+|+++++.|+.+.+.||..|.++.|| +++.-.+.+++||+++ +.++.+...
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 192 (356)
T 3ro6_B 129 SLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPN 192 (356)
T ss_dssp CEEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred ceeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3455677888899999999999999999999999876 3667788899999987 578888888
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. +++.++++.|++.|+++|. +. .++.+|+..+++++.. ++||++.+.+.+++++.
T Consensus 193 ~~~~~----~~a~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 251 (356)
T 3ro6_B 193 QSYDR----DGLLRLDRLVQELGIEFIE---------------QP-FPAGRTDWLRALPKAI-RRRIAADESLLGPADAF 251 (356)
T ss_dssp TCCCH----HHHHHHHHHHHHTTCCCEE---------------CC-SCTTCHHHHHTSCHHH-HHTEEESTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHHhcCCCEEE---------------CC-CCCCcHHHHHHHHhcC-CCCEEeCCcCCCHHHHH
Confidence 88864 4688999999999999984 11 1245899999998877 69999999999999999
Q ss_pred HHhh---hcCEEEEccc
Q psy2378 221 LHLN---YIDGVMLGRE 234 (956)
Q Consensus 221 ~~l~---~ad~VmiGR~ 234 (956)
++++ .||.|++--+
T Consensus 252 ~~~~~~~~~d~v~~k~~ 268 (356)
T 3ro6_B 252 ALAAPPAACGIFNIKLM 268 (356)
T ss_dssp HHHSSSCSCSEEEECHH
T ss_pred HHHhcCCcCCEEEEccc
Confidence 9998 4999998443
No 171
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.10 E-value=1.7e-05 Score=90.56 Aligned_cols=150 Identities=13% Similarity=0.097 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccc-cCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCc
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINS 148 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~ 148 (956)
..+|+++++.|+.+.+.||..|-++.|+|... ..|... ..+++...+++++||+++ ++++.+....+|+.
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~--- 214 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVP--- 214 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCH---
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH---
Confidence 35899999999999899999999999987531 112111 123677889999999998 46787777667753
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--c
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--I 226 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--a 226 (956)
++++++++.|++.|+++|.- ..++.+++..+++++.+ ++||++.+.+.++++++++++. +
T Consensus 215 -~~A~~~~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 276 (412)
T 4e4u_A 215 -SSAIRLAKRLEKYDPLWFEE----------------PVPPGQEEAIAQVAKHT-SIPIATGERLTTKYEFHKLLQAGGA 276 (412)
T ss_dssp -HHHHHHHHHHGGGCCSEEEC----------------CSCSSCHHHHHHHHHTC-SSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHhhhcCCcEEEC----------------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHHHHHHcCCC
Confidence 56889999999999999841 02245899999999988 7999999999999999999986 9
Q ss_pred CEEEEccccccCCcchHHHH
Q psy2378 227 DGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 227 d~VmiGR~~l~~P~l~~~i~ 246 (956)
|.|++--+-.+...=..++.
T Consensus 277 d~v~~d~~~~GGit~~~kia 296 (412)
T 4e4u_A 277 SILQLNVARVGGLLEAKKIA 296 (412)
T ss_dssp SEECCCTTTTTSHHHHHHHH
T ss_pred CEEEeCccccCCHHHHHHHH
Confidence 99987555555544444444
No 172
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.08 E-value=5.2e-05 Score=78.40 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=53.8
Q ss_pred CcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccCCcchHHHHHhh
Q psy2378 190 LKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 190 ~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
.+.+.++++++.+.++||+.-|||.|++++++++..||+|.+|.++..||.++.++.+.+
T Consensus 166 ~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~~gAD~VVVGSa~v~~p~~~~~~v~a~ 225 (228)
T 3vzx_A 166 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALKTVAAV 225 (228)
T ss_dssp CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHHTTCSEEEECTHHHHCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhCCCEEEEChHHhcCHHHHHHHHHHH
Confidence 389999999998745999999999999999999845999999999999999999887654
No 173
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.07 E-value=2.5e-05 Score=87.33 Aligned_cols=145 Identities=11% Similarity=0.105 Sum_probs=114.8
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g 142 (956)
|+...+...+|+++++.|+.+.+.||..|.++.|++ ++.-.+++++||+++ ++++.+....+
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~ 193 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQA 193 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCC
Confidence 344567778999999999998899999999998764 355678899999987 57788887777
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+. +++.++++.|++.|+++|. + ..++.+|+..+++++.+ ++||++.+.+.++++++++
T Consensus 194 ~~~----~~a~~~~~~L~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~ 252 (354)
T 3jva_A 194 WTP----KDAVKAIQALADYQIELVE--------Q--------PVKRRDLEGLKYVTSQV-NTTIMADESCFDAQDALEL 252 (354)
T ss_dssp SCH----HHHHHHHHHTTTSCEEEEE--------C--------CSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHHH
T ss_pred CCH----HHHHHHHHHHHhcCCCEEE--------C--------CCChhhHHHHHHHHHhC-CCCEEEcCCcCCHHHHHHH
Confidence 853 4688999999999988884 1 11245899999999988 7999999999999999999
Q ss_pred hhh--cCEEEEccccccCCcchHHHH
Q psy2378 223 LNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 223 l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
++. +|.|++--+-.+...=..++.
T Consensus 253 l~~~~~d~v~~k~~~~GGit~~~~i~ 278 (354)
T 3jva_A 253 VKKGTVDVINIKLMKCGGIHEALKIN 278 (354)
T ss_dssp HHHTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHcCCCCEEEECchhcCCHHHHHHHH
Confidence 986 999998655554444444433
No 174
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.06 E-value=3.2e-05 Score=79.85 Aligned_cols=148 Identities=14% Similarity=0.159 Sum_probs=101.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+.|+.+-+.-.++.+. .++.+.++|+|+|=++...+ .+.+.++++.+++. +.++.+-+..
T Consensus 53 ~~~i~~~~~~~~~~~~--~~~~~~~~Gad~v~v~~~~~----------------~~~~~~~~~~~~~~-g~~~~v~~~~- 112 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHF--ESQLLFDAGADYVTVLGVTD----------------VLTIQSCIRAAKEA-GKQVVVDMIC- 112 (211)
T ss_dssp TSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECTT-
T ss_pred CCEEEEEEEeccchHH--HHHHHHhcCCCEEEEeCCCC----------------hhHHHHHHHHHHHc-CCeEEEEecC-
Confidence 5677776654444332 25566789999999975321 24456777777664 6665543211
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
. .+ ..+.++.+.+.|+|.|.++.+.. | .. .++..++.++++++.++++||++.|||+ ++++.++
T Consensus 113 ~---~t---~~~~~~~~~~~g~d~i~v~~g~~---g---~~---~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~ 176 (211)
T 3f4w_A 113 V---DD---LPARVRLLEEAGADMLAVHTGTD---Q---QA---AGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDY 176 (211)
T ss_dssp C---SS---HHHHHHHHHHHTCCEEEEECCHH---H---HH---TTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHH
T ss_pred C---CC---HHHHHHHHHHcCCCEEEEcCCCc---c---cc---cCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHH
Confidence 1 11 34667889999999998874321 1 00 1123688899999887689999999995 9999999
Q ss_pred hhh-cCEEEEccccccCCcchHHHH
Q psy2378 223 LNY-IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 223 l~~-ad~VmiGR~~l~~P~l~~~i~ 246 (956)
++. ||+|.+||+++..++....++
T Consensus 177 ~~~Gad~vvvGsai~~~~d~~~~~~ 201 (211)
T 3f4w_A 177 ALLGPDVVIVGSAITHAADPAGEAR 201 (211)
T ss_dssp HTTCCSEEEECHHHHTCSSHHHHHH
T ss_pred HHcCCCEEEECHHHcCCCCHHHHHH
Confidence 988 999999999988776544433
No 175
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.06 E-value=2.5e-05 Score=99.12 Aligned_cols=117 Identities=13% Similarity=0.075 Sum_probs=80.8
Q ss_pred CChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCC-CCCCCcCcH
Q psy2378 115 TKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ-NRKIPILKY 192 (956)
Q Consensus 115 ~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~-~~~~~~~~~ 192 (956)
.+++-+.++++.+|+.. +.||.||+-.+.. ..+.|+.++++|+|+|+|.+..+.. +.++.. ....+..-.
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g-------i~~~A~~a~kAGAD~IvVsG~eGGT-gasp~~~~~~~GlPt~ 1081 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEIG-------IGTIAAGVAKANADIIQISGHDGGT-GASPLSSIKHAGSPWE 1081 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECSTT-------HHHHHHHHHHTTCSEEEEECTTCCC-SSEEHHHHHHBCCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCCC-------hHHHHHHHHHcCCCEEEEeCCCCcc-CCCcchhhcCCchhHH
Confidence 34566789999999988 8999999876421 3457889999999999997653210 000000 000111112
Q ss_pred HHHHHHHHhC------CCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 193 NFVYNLKKDF------PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 193 ~~i~~v~~~~------~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
..+.++.+.+ .++|||+.|||.+..|+.+++.. ||+|++||++|.-.
T Consensus 1082 ~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1082 LGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp HHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHH
Confidence 4445554432 15999999999999999999988 99999999987644
No 176
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.05 E-value=3.9e-05 Score=89.78 Aligned_cols=132 Identities=18% Similarity=0.184 Sum_probs=94.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHH
Q psy2378 78 LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFV 156 (956)
Q Consensus 78 ~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a 156 (956)
..+.|+.+.++|+|.|.+... ++ +.+...+.++.+++.+ ++|+..+- .. ..+.+
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a-----------~g----~~~~~~~~i~~l~~~~p~~pvi~G~---v~-------t~~~a 288 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTA-----------HG----HSAGVLRKIAEIRAHFPNRTLIAGN---IA-------TAEGA 288 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCS-----------CT----TCHHHHHHHHHHHHHCSSSCEEEEE---EC-------SHHHH
T ss_pred HHHHHHHHHHcCCCeEEEeee-----------cC----cchhHHHHHHHHHHHCCCCcEeCCC---cc-------CHHHH
Confidence 345677788889999999741 11 3445678889999888 88987441 11 13567
Q ss_pred HHHHHcCCCEEEEccc------ccccccCCCCCCCCCCcCcHHHHHHHHH---hCCCceEEEecCCCCHHHHHHHhhh-c
Q psy2378 157 GTVSSAGCRTFIVHAR------NAFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-I 226 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r------~~~~~g~~~~~~~~~~~~~~~~i~~v~~---~~~~ipVi~nGgI~s~~da~~~l~~-a 226 (956)
+.+.++|+|+|.+... +....+. +...++.+.++.+ .. ++|||+.|||.+++|+.++++. |
T Consensus 289 ~~~~~~Gad~I~vg~g~g~~~~tr~~~~~--------~~p~~~~l~~~~~~~~~~-~ipvia~GGi~~~~di~kal~~GA 359 (491)
T 1zfj_A 289 RALYDAGVDVVKVGIGPGSICTTRVVAGV--------GVPQVTAIYDAAAVAREY-GKTIIADGGIKYSGDIVKALAAGG 359 (491)
T ss_dssp HHHHHTTCSEEEECSSCCTTBCHHHHTCC--------CCCHHHHHHHHHHHHHHT-TCEEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEECccCCcceEEeeecCC--------CCCcHHHHHHHHHHHhhc-CCCEEeeCCCCCHHHHHHHHHcCC
Confidence 8899999999998521 1111111 1235666666655 34 7999999999999999999988 9
Q ss_pred CEEEEccccccCCcchH
Q psy2378 227 DGVMLGREAYKNPFLMS 243 (956)
Q Consensus 227 d~VmiGR~~l~~P~l~~ 243 (956)
|+|++||+++..++...
T Consensus 360 ~~v~vG~~~~~~~e~~~ 376 (491)
T 1zfj_A 360 NAVMLGSMFAGTDEAPG 376 (491)
T ss_dssp SEEEESTTTTTBSSCCC
T ss_pred cceeeCHHhhCCCcCcc
Confidence 99999999998766443
No 177
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.05 E-value=1.2e-05 Score=91.82 Aligned_cols=165 Identities=10% Similarity=0.021 Sum_probs=122.2
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCccee------eeCccccccc--CChHHHHHHHHHHhhcc--
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRV------QNGFFGAILM--TKPLLVSDCIKAMRDSV-- 131 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~------~~~~~G~~l~--~~~~~~~eiv~~v~~~~-- 131 (956)
+.-|+-..+.+.+|+++++.|+.+.+.||..|-+..|++-... ....-|..+. ..++...+++++||+++
T Consensus 142 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~ 221 (422)
T 3tji_A 142 DAIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGW 221 (422)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCS
T ss_pred CeEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCC
Confidence 3445555567889999999999999999999999998742100 0001111111 12577889999999998
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
++++.+....+|+. ++++++++.|++.|+++|.= ..++.+++..+++++.+ ++||++.+
T Consensus 222 d~~L~vDaN~~~~~----~~A~~~~~~Le~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~iPIa~dE 280 (422)
T 3tji_A 222 KLHILHDVHERLFP----QQAVQLAKQLEPFQPYFIED----------------ILPPQQSAWLEQVRQQS-CVPLALGE 280 (422)
T ss_dssp SSEEEEECTTCSCH----HHHHHHHHHHGGGCCSEEEC----------------CSCGGGGGGHHHHHHHC-CCCEEECT
T ss_pred CCEEEEECCCCCCH----HHHHHHHHHHHhhCCCeEEC----------------CCChhhHHHHHHHHhhC-CCCEEEeC
Confidence 57888887777763 56889999999999998841 01245788889999988 79999999
Q ss_pred CCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 212 GIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 212 gI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
.+.++++++++++. ||.|++--+-.+...=..++..
T Consensus 281 ~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~ 318 (422)
T 3tji_A 281 LFNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAH 318 (422)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred CcCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHH
Confidence 99999999999986 9999886666665555555543
No 178
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=98.04 E-value=9.9e-05 Score=83.17 Aligned_cols=203 Identities=11% Similarity=0.076 Sum_probs=129.7
Q ss_pred CCCcceeeeeeecccccCCcchHHHHHHHHHHHhhhccccc------ccceeEEEec-CCCCCCCCHHHHHHHHHHHHHH
Q psy2378 624 IPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSLPIIL------NRKIHTIFIG-GGTPSLISDTGLDYLLKNIKKL 696 (956)
Q Consensus 624 ~P~c~~~Ce~C~l~k~~~~~~~~~~v~~vl~eI~~~~~~~~------~~~i~~i~fg-ggtPs~L~~~~l~~ll~~i~~~ 696 (956)
+..|+..|.||.-... + ..+.-..+++++++......+. ...+..|.|. +|.|+. ..+.+..+++.+++.
T Consensus 122 q~GCnl~C~fC~tg~~-g-~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEPLl-n~d~v~~~i~~lk~~ 198 (404)
T 3rfa_A 122 QVGCALECKFCSTAQQ-G-FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL-NLNNVVPAMEIMLDD 198 (404)
T ss_dssp EEECSSCCTTCGGGTT-C-EEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGG-CHHHHHHHHHHHHST
T ss_pred CCCCCCcCCCCCCCCC-C-CCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCccc-CHHHHHHHHHHHHhh
Confidence 4789999999975432 1 1111124556666544332221 2356777776 688765 556677788877763
Q ss_pred cccC-CCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhC---CCCCHHHHHHHHH-HHHhcCC---ee
Q psy2378 697 LLFK-KNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILG---RTHDSKQAKYAIE-IAKQYFN---NF 768 (956)
Q Consensus 697 ~~~~-~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~---R~~~~~~~~~ai~-~l~~~~~---~i 768 (956)
.++. ....+++.+|-.. + .++.|.+.+...+.+.+.+.+++..+.+- +.++.+++.++++ .+++.+. .+
T Consensus 199 ~Gl~~s~r~itlsTnG~~--p-~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V 275 (404)
T 3rfa_A 199 FGFGLSKRRVTLSTSGVV--P-ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRV 275 (404)
T ss_dssp TTTCCCGGGEEEEESCCH--H-HHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCE
T ss_pred cCcCcCCCceEEECCCcH--H-HHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccE
Confidence 2221 1126777765432 4 45556555666789999999999988765 6788999999994 4455554 45
Q ss_pred EEE-EeecCCCCCHHHHHHHHHHHHccCCCeEEEEeeeccCCcccccCCCCCCCCHHHHHHHHHHHHHHHHhcCch
Q psy2378 769 NLD-LIYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLLKNNYYK 843 (956)
Q Consensus 769 ~~d-lI~GlPgqT~e~~~~tl~~~~~l~~~~i~~y~l~~~pgT~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 843 (956)
.+- +++.--.++++++.+..+++..++ .++.+-+|.|.+++.+ ..|+.+. .....+.|.+.|+.
T Consensus 276 ~ie~vLI~GvNDs~e~~~~La~ll~~l~-~~VnLIpynP~~~~~~------~~ps~e~----i~~f~~iL~~~Gi~ 340 (404)
T 3rfa_A 276 TIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNPFPGAPY------GRSSNSR----IDRFSKVLMSYGFT 340 (404)
T ss_dssp EEEEEEBTTTTCSHHHHHHHHHHTTTSC-EEEEEEECCCCTTCCC------CBCCHHH----HHHHHHHHHHTTCE
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHcCC-CcEEEEeccCCCCCCC------CCCCHHH----HHHHHHHHHHcCCc
Confidence 443 233334688999999999999886 4788889988877543 3455444 33344556676654
No 179
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.04 E-value=1.8e-05 Score=89.12 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=100.6
Q ss_pred CEEEEecC-CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEecc
Q psy2378 65 PIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRI 141 (956)
Q Consensus 65 p~~vQl~g-~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~ 141 (956)
|+...+.. .+++++++.|+.+.+.||+.|.++.+ |+...+++++||++++ +++.+....
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan~ 192 (368)
T 1sjd_A 131 PCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDANT 192 (368)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECTT
T ss_pred cceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEeccC
Confidence 44445443 48999999999999999999999863 3455688899998874 666666555
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~ 221 (956)
+|+. ++ +++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++.+.+.+++++++
T Consensus 193 ~~~~----~~-~~~~~~l~~~~i~~iE---------------~P-~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 250 (368)
T 1sjd_A 193 AYTL----GD-APQLARLDPFGLLLIE---------------QP-LEEEDVLGHAELARRI-QTPICLDESIVSARAAAD 250 (368)
T ss_dssp CCCG----GG-HHHHHTTGGGCCSEEE---------------CC-SCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHH
T ss_pred CCCH----HH-HHHHHHHHhcCCCeEe---------------CC-CChhhHHHHHHHHHhC-CCCEEECCCcCCHHHHHH
Confidence 6653 45 7899999999999873 11 1246899999999987 799999999999999999
Q ss_pred Hhhh--cCEEEE
Q psy2378 222 HLNY--IDGVML 231 (956)
Q Consensus 222 ~l~~--ad~Vmi 231 (956)
+++. ||.|++
T Consensus 251 ~i~~~~~d~v~i 262 (368)
T 1sjd_A 251 AIKLGAVQIVNI 262 (368)
T ss_dssp HHHTTCCSEEEE
T ss_pred HHHcCCCCEEEe
Confidence 9976 999998
No 180
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.03 E-value=4.4e-06 Score=88.40 Aligned_cols=87 Identities=14% Similarity=0.161 Sum_probs=73.4
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++++.++++|+++|+++..+....+ .+.. +.++++++.+ ++||+++|+|.++++++++++. ||+|+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~---------~~~~-~~i~~i~~~~-~ipv~v~ggi~~~~~~~~~l~~Gad~V~ 101 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGR---------GSNH-ELLAEVVGKL-DVQVELSGGIRDDESLAAALATGCARVN 101 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTS---------CCCH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccC---------CChH-HHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 578899999999999999876532111 1234 8899999988 7999999999999999999988 99999
Q ss_pred EccccccCCcchHHHHHhh
Q psy2378 231 LGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 231 iGR~~l~~P~l~~~i~~~~ 249 (956)
+|+.++.||+++.++.+.+
T Consensus 102 lg~~~l~~p~~~~~~~~~~ 120 (244)
T 2y88_A 102 VGTAALENPQWCARVIGEH 120 (244)
T ss_dssp ECHHHHHCHHHHHHHHHHH
T ss_pred ECchHhhChHHHHHHHHHc
Confidence 9999999999888877643
No 181
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.02 E-value=4.5e-06 Score=88.48 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
+..++++.++++|+++|+++..... + +..+..++.++++++.+ ++||+++|+|.++++++++++. ||+|
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~--~-------~~~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V 103 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAA--P-------EGRATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKV 103 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCC--T-------TTHHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcc--c-------cCCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 3678999999999999999865421 0 11134678899999987 7999999999999999999888 9999
Q ss_pred EEccccccCCcchHHHHHh
Q psy2378 230 MLGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 230 miGR~~l~~P~l~~~i~~~ 248 (956)
++|+.++.||+++.++.+.
T Consensus 104 ~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 104 SVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp EESHHHHHCTHHHHHHHHH
T ss_pred EEChHHhhCcHHHHHHHHH
Confidence 9999999999998887664
No 182
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.01 E-value=1.7e-05 Score=89.81 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
|.+|+++++.|+.+.+.||+.|.++.|+ +++.-.+.+++||+++ +.++.|....+|+.
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~---- 212 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDL---- 212 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCH----
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCH----
Confidence 5568999999999999999999998764 4677789999999997 57888888878864
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCc-HHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--c
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--I 226 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~-~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--a 226 (956)
++++++++.|++.|+++|.= ..++.+ ++..+++++.. ++||++.+.+.++++++++++. +
T Consensus 213 ~~A~~~~~~L~~~~i~~iEe----------------P~~~~d~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 275 (392)
T 3ddm_A 213 PRARQMAQRLGPAQLDWLEE----------------PLRADRPAAEWAELAQAA-PMPLAGGENIAGVAAFETALAARSL 275 (392)
T ss_dssp HHHHHHHHHHGGGCCSEEEC----------------CSCTTSCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHhCCCEEEC----------------CCCccchHHHHHHHHHhc-CCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 46889999999999999841 122457 99999999988 7999999999999999999976 9
Q ss_pred CEEEEc
Q psy2378 227 DGVMLG 232 (956)
Q Consensus 227 d~VmiG 232 (956)
|.|++-
T Consensus 276 d~v~~k 281 (392)
T 3ddm_A 276 RVMQPD 281 (392)
T ss_dssp EEECCC
T ss_pred CEEEeC
Confidence 988874
No 183
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.01 E-value=6e-06 Score=87.43 Aligned_cols=86 Identities=13% Similarity=0.186 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++++.++++|+++|+++..+....+ .+.+ +.++++++.+ ++||+.+|+|.++++++++++. ||+|.
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~---------~~~~-~~i~~i~~~~-~ipv~v~ggI~~~~~~~~~l~~Gad~V~ 102 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGT---------GDNR-ALIAEVAQAM-DIKVELSGGIRDDDTLAAALATGCTRVN 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTS---------CCCH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcC---------CChH-HHHHHHHHhc-CCcEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 578899999999999999876532211 1245 8899999987 7999999999999999999988 99999
Q ss_pred EccccccCCcchHHHHHh
Q psy2378 231 LGREAYKNPFLMSNFDLN 248 (956)
Q Consensus 231 iGR~~l~~P~l~~~i~~~ 248 (956)
+|+.++.||+++.++.+.
T Consensus 103 lg~~~l~~p~~~~~~~~~ 120 (244)
T 1vzw_A 103 LGTAALETPEWVAKVIAE 120 (244)
T ss_dssp ECHHHHHCHHHHHHHHHH
T ss_pred ECchHhhCHHHHHHHHHH
Confidence 999999999988887764
No 184
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.01 E-value=1.9e-05 Score=81.35 Aligned_cols=149 Identities=11% Similarity=0.077 Sum_probs=103.0
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCccee---------eeCcccc---------------cccCChH
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRV---------QNGFFGA---------------ILMTKPL 118 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~---------~~~~~G~---------------~l~~~~~ 118 (956)
+.|++.-+.+.+++++.+.++.+.+.|++.||+++-||.... ...++|. ...--|.
T Consensus 12 ~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~ 91 (207)
T 2yw3_A 12 ESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAALEAGAAFLVSPG 91 (207)
T ss_dssp HHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHHHHTCSEEEESS
T ss_pred hCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC
Confidence 468999999999999999999999999999999988874321 1123443 1111122
Q ss_pred HHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcC-cHHHHHH
Q psy2378 119 LVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL-KYNFVYN 197 (956)
Q Consensus 119 ~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~-~~~~i~~ 197 (956)
.-.++++..++ .+.|+...+ . + ..+ +....+.|+|+|.+++.. +. ..++++.
T Consensus 92 ~d~~v~~~~~~-~g~~~i~G~----~---t---~~e-~~~A~~~Gad~v~~fpa~---------------~~gG~~~lk~ 144 (207)
T 2yw3_A 92 LLEEVAALAQA-RGVPYLPGV----L---T---PTE-VERALALGLSALKFFPAE---------------PFQGVRVLRA 144 (207)
T ss_dssp CCHHHHHHHHH-HTCCEEEEE----C---S---HHH-HHHHHHTTCCEEEETTTT---------------TTTHHHHHHH
T ss_pred CCHHHHHHHHH-hCCCEEecC----C---C---HHH-HHHHHHCCCCEEEEecCc---------------cccCHHHHHH
Confidence 22334444433 355544321 1 1 123 345567899999886411 12 4678899
Q ss_pred HHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 198 LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 198 v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
+++.+|++|+++.|||+ ++++.++++. +|+|.+|++++. ++
T Consensus 145 l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~-~d 186 (207)
T 2yw3_A 145 YAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ-GN 186 (207)
T ss_dssp HHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS-SC
T ss_pred HHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC-CC
Confidence 99888789999999996 7999999998 999999999887 44
No 185
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=97.96 E-value=6.2e-05 Score=84.93 Aligned_cols=133 Identities=10% Similarity=0.149 Sum_probs=108.2
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEecc
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI 141 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~ 141 (956)
-|+-..+...+++++++.|+.+.+.||..+-+..|+. +++.-.+.+++||+++ +.++.|....
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 3555666677899998888888778999999987652 3566678899999987 5788888888
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~ 221 (956)
+|+..+ ++++++.|++.|+++|.= ..++.+|+..+++++.. ++||++.+.+.+++++.+
T Consensus 201 ~~~~~~----A~~~~~~l~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 259 (377)
T 3my9_A 201 ALTPFG----AMKILRDVDAFRPTFIEQ----------------PVPRRHLDAMAGFAAAL-DTPILADESCFDAVDLME 259 (377)
T ss_dssp CCCTTT----HHHHHHHHHTTCCSCEEC----------------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHHH
T ss_pred CcCHHH----HHHHHHHHhhcCCCEEEC----------------CCCccCHHHHHHHHHhC-CCCEEECCccCCHHHHHH
Confidence 887643 678999999999998841 12346899999999988 799999999999999999
Q ss_pred Hhhh--cCEEEEc
Q psy2378 222 HLNY--IDGVMLG 232 (956)
Q Consensus 222 ~l~~--ad~VmiG 232 (956)
+++. +|.|++-
T Consensus 260 ~i~~~~~d~v~~k 272 (377)
T 3my9_A 260 VVRRQAADAISVK 272 (377)
T ss_dssp HHHHTCCSEEECC
T ss_pred HHHcCCCCEEEec
Confidence 9986 9999873
No 186
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.93 E-value=0.00034 Score=79.97 Aligned_cols=137 Identities=17% Similarity=0.233 Sum_probs=89.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 150 (956)
|-.++.+.++. .+.++|+|.|=|... .| ..+.+.+.++.+|+.. ++||.+---.
T Consensus 277 gv~~d~~eR~~-aLv~AGvD~iviD~a--------hG-------hs~~v~~~i~~ik~~~p~~~viaGNVa--------- 331 (556)
T 4af0_A 277 GTRPGDKDRLK-LLAEAGLDVVVLDSS--------QG-------NSVYQIEFIKWIKQTYPKIDVIAGNVV--------- 331 (556)
T ss_dssp CSSHHHHHHHH-HHHHTTCCEEEECCS--------CC-------CSHHHHHHHHHHHHHCTTSEEEEEEEC---------
T ss_pred ccCccHHHHHH-HHHhcCCcEEEEecc--------cc-------ccHHHHHHHHHHHhhCCcceEEecccc---------
Confidence 34455555544 566789998877532 11 2556789999999887 5677654221
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHH---HHhCCCceEEEecCCCCHHHHHHHhhh-c
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNL---KKDFPELEIIINGGIKTKKEIDLHLNY-I 226 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v---~~~~~~ipVi~nGgI~s~~da~~~l~~-a 226 (956)
+.+-++.|.++|+|++-|--+.+. - .+-+...-.+-..+..+.++ ++.. ++|||+-|||.+.-|+.++|.. |
T Consensus 332 -T~e~a~~Li~aGAD~vkVGiGpGS-i-CtTr~v~GvG~PQ~tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~KAlaaGA 407 (556)
T 4af0_A 332 -TREQAAQLIAAGADGLRIGMGSGS-I-CITQEVMAVGRPQGTAVYAVAEFASRF-GIPCIADGGIGNIGHIAKALALGA 407 (556)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSCST-T-BCCTTTCCSCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHcCCCEEeecCCCCc-c-cccccccCCCCcHHHHHHHHHHHHHHc-CCCEEecCCcCcchHHHHHhhcCC
Confidence 236688899999999998533210 0 00001111112344455444 3445 6999999999999999999998 9
Q ss_pred CEEEEcccccc
Q psy2378 227 DGVMLGREAYK 237 (956)
Q Consensus 227 d~VmiGR~~l~ 237 (956)
|.||+|.-+-+
T Consensus 408 d~VMlGsllAG 418 (556)
T 4af0_A 408 SAVMMGGLLAG 418 (556)
T ss_dssp SEEEESTTTTT
T ss_pred CEEEEchhhcc
Confidence 99999986543
No 187
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.92 E-value=2.2e-05 Score=82.05 Aligned_cols=154 Identities=12% Similarity=0.074 Sum_probs=101.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEec------cCCCC----CC
Q psy2378 78 LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR------IGIDD----IN 147 (956)
Q Consensus 78 ~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir------~g~~~----~~ 147 (956)
-.++++.+.++|+|.|||-.+ .--+.+.+.++++++|+ +++|+.+=.. .|.+. .-
T Consensus 22 t~~~~~~l~~~GaD~ielG~S--------------~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdL 86 (240)
T 1viz_A 22 PDEQLEILCESGTDAVIIGGS--------------DGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSV 86 (240)
T ss_dssp CHHHHHHHHTSCCSEEEECC------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEECCC--------------CCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEccc
Confidence 345567788899999999651 22357889999999998 8899876221 12210 00
Q ss_pred cHHHHHHH-----HHHHHHcC-----CCEEE----E-ccccc---c--------------------c--ccCCCCCCCCC
Q psy2378 148 SYDFVRDF-----VGTVSSAG-----CRTFI----V-HARNA---F--------------------L--KKLNPKQNRKI 187 (956)
Q Consensus 148 ~~~~~~~~-----a~~l~~~G-----~~~i~----v-h~r~~---~--------------------~--~g~~~~~~~~~ 187 (956)
..++..++ ...+.+.| .+.|. + .+.+. . . .++.-... .-
T Consensus 87 p~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s-~G 165 (240)
T 1viz_A 87 LNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY-SG 165 (240)
T ss_dssp TTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC-TT
T ss_pred CcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeC-CC
Confidence 00111233 46678888 88776 4 11000 0 0 01100000 01
Q ss_pred CcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccCCc-chHHHHH
Q psy2378 188 PILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPF-LMSNFDL 247 (956)
Q Consensus 188 ~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~P~-l~~~i~~ 247 (956)
.+.+.+.++++++.+.++||+.-|||.|+++++++++.||+|.+|.++..+|. ++++++.
T Consensus 166 ~~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~gAd~VIVGSa~v~~~~~~~~~v~~ 226 (240)
T 1viz_A 166 VLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALKTVAA 226 (240)
T ss_dssp SCCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHTTCSEEEECTHHHHCHHHHHTHHHH
T ss_pred ccChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHhCCCEEEEChHHHhCHHHHHHHHHH
Confidence 14578999999998646999999999999999998878999999999999999 8888653
No 188
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=97.91 E-value=6.6e-05 Score=85.07 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=116.3
Q ss_pred CCCCEEEEec----CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccE
Q psy2378 62 EEHPIAFQVG----DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDI 135 (956)
Q Consensus 62 ~~~p~~vQl~----g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv 135 (956)
+.-|+-..++ +.+|+++++.|+.+.+.||..|.++.|| +++.-.+.+++||+++ +.++
T Consensus 126 ~~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l 189 (391)
T 3gd6_A 126 EKIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRI 189 (391)
T ss_dssp SEEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEE
T ss_pred CeEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcE
Confidence 3345556777 7889999999999999999999999876 2566788999999987 4677
Q ss_pred E-EEeccCCCCCCcHHHHHHHHHHHHHcCC--CEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 136 T-VKHRIGIDDINSYDFVRDFVGTVSSAGC--RTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 136 ~-vKir~g~~~~~~~~~~~~~a~~l~~~G~--~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
. +....+|+. +++.++++.|++.|+ ++|. +. .++.+++..+++++.+ ++|| ...
T Consensus 190 ~~vDan~~~~~----~~A~~~~~~l~~~~i~~~~iE---------------qP-~~~~d~~~~~~l~~~~-~iPI--dE~ 246 (391)
T 3gd6_A 190 KSYDFSHLLNW----KDAHRAIKRLTKYDLGLEMIE---------------SP-APRNDFDGLYQLRLKT-DYPI--SEH 246 (391)
T ss_dssp EEEECTTCSCH----HHHHHHHHHHTTCCSSCCEEE---------------CC-SCTTCHHHHHHHHHHC-SSCE--EEE
T ss_pred EEecCCCCcCH----HHHHHHHHHHHhcCCCcceec---------------CC-CChhhHHHHHHHHHHc-CCCc--CCC
Confidence 7 777667753 568899999999999 8884 11 1245899999999988 6999 889
Q ss_pred CCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 213 IKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 213 I~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+.++++++++++. +|.|++--+-++...=..++.+
T Consensus 247 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~ 283 (391)
T 3gd6_A 247 VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAY 283 (391)
T ss_dssp CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHH
Confidence 9999999999986 9999997666666555555443
No 189
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=97.91 E-value=5.9e-05 Score=84.89 Aligned_cols=124 Identities=12% Similarity=0.118 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
.+++++++.|+.+.+. ||..|-+..|+| +++.-.+++++||+++ +.++.+....+|+.
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~---- 210 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAIDGNGKWDL---- 210 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCH----
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCH----
Confidence 3899999999888888 999999998875 3566688999999998 57888887777763
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
+++.++++.|++.|+++|. +. .++.+++..+++++.+ ++||++.+.+.++++++++++. +|
T Consensus 211 ~~a~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d 273 (372)
T 3tj4_A 211 PTCQRFCAAAKDLDIYWFE---------------EP-LWYDDVTSHARLARNT-SIPIALGEQLYTVDAFRSFIDAGAVA 273 (372)
T ss_dssp HHHHHHHHHTTTSCEEEEE---------------SC-SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHhhcCCCEEE---------------CC-CCchhHHHHHHHHhhc-CCCEEeCCCccCHHHHHHHHHcCCCC
Confidence 4678999999999988883 11 1246899999999988 7999999999999999999986 99
Q ss_pred EEEEc
Q psy2378 228 GVMLG 232 (956)
Q Consensus 228 ~VmiG 232 (956)
.|++-
T Consensus 274 ~v~~k 278 (372)
T 3tj4_A 274 YVQPD 278 (372)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 88763
No 190
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.91 E-value=1.3e-05 Score=84.11 Aligned_cols=168 Identities=13% Similarity=0.190 Sum_probs=100.0
Q ss_pred ccccCCCCCCEEEEecCCCHH-HHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCcc
Q psy2378 56 CLDFNAEEHPIAFQVGDNEPK-KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID 134 (956)
Q Consensus 56 ~~~~~~~~~p~~vQl~g~~~~-~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p 134 (956)
.+..-+ +.|++.|+.+.||- .+...-+.++++||.|| +|+ |.--...+.+...|+.+.--..+.++.|+.+-...
T Consensus 88 vlp~v~-~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~g 163 (286)
T 2p10_A 88 VLPVVR-HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLD 163 (286)
T ss_dssp HGGGCS-SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTT
T ss_pred hhccCC-CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCC
Confidence 444433 78999999999884 34444477889999999 997 32122234444555444433444445544433222
Q ss_pred E-EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCc-HHHHH----HHHHhCCCceEE
Q psy2378 135 I-TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVY----NLKKDFPELEII 208 (956)
Q Consensus 135 v-~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~-~~~i~----~v~~~~~~ipVi 208 (956)
+ |+=.- . ..+-++.+.++|+|.|.+|.... ..|..|.... ....+ -+.+. .+++..|++.|+
T Consensus 164 L~Ti~~v----~------~~eeA~amA~agpDiI~~h~glT-~gglIG~~~a-vs~~~~~e~i~~i~~a~~~vnpdvivL 231 (286)
T 2p10_A 164 LLTTPYV----F------SPEDAVAMAKAGADILVCHMGLT-TGGAIGARSG-KSMDDCVSLINECIEAARTIRDDIIIL 231 (286)
T ss_dssp CEECCEE----C------SHHHHHHHHHHTCSEEEEECSCC----------C-CCHHHHHHHHHHHHHHHHHHCSCCEEE
T ss_pred CeEEEec----C------CHHHHHHHHHcCCCEEEECCCCC-CCCcccCCCc-ccHHHhHHHHHHHHHHHHHhCCCcEEE
Confidence 1 11111 1 12457788899999999996631 1233222111 11122 23333 334444678887
Q ss_pred Eec-CCCCHHHHHHHhhh---cCEEEEccccccCC
Q psy2378 209 ING-GIKTKKEIDLHLNY---IDGVMLGREAYKNP 239 (956)
Q Consensus 209 ~nG-gI~s~~da~~~l~~---ad~VmiGR~~l~~P 239 (956)
+-| +|.+++|+..+++. +||+..|.++..=|
T Consensus 232 c~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 232 SHGGPIANPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp EESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred ecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 666 99999999999986 99999999988877
No 191
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.91 E-value=0.00012 Score=78.17 Aligned_cols=166 Identities=14% Similarity=0.081 Sum_probs=99.6
Q ss_pred CEEEEecCC--CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcc------ccccc--CChHHHHHHHHHHhhcc-Cc
Q psy2378 65 PIAFQVGDN--EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFF------GAILM--TKPLLVSDCIKAMRDSV-EI 133 (956)
Q Consensus 65 p~~vQl~g~--~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~------G~~l~--~~~~~~~eiv~~v~~~~-~~ 133 (956)
.++.=|... +.+...+.++.+.++|+|+|||+. |...-..+|- -.+|. -+.+.+.++++++|+.+ ++
T Consensus 18 ~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~--P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 18 ALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGF--PFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEEC--CCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred eEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECC--CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 344444443 457899999999999999999954 4321111110 00010 24567889999999988 89
Q ss_pred cEEEEeccCCCCCCcHH--HHHHHHHHHHHcCCCEEEEccc--------------------------cc-----------
Q psy2378 134 DITVKHRIGIDDINSYD--FVRDFVGTVSSAGCRTFIVHAR--------------------------NA----------- 174 (956)
Q Consensus 134 pv~vKir~g~~~~~~~~--~~~~~a~~l~~~G~~~i~vh~r--------------------------~~----------- 174 (956)
|+.+ + ++.+ +.. ....+++.+.++|+|.+.++.- +.
T Consensus 96 Pi~~-m--~y~n--~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a 170 (262)
T 2ekc_A 96 PFLL-M--TYYN--PIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAA 170 (262)
T ss_dssp CEEE-E--CCHH--HHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHC
T ss_pred CEEE-E--ecCc--HHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC
Confidence 9877 2 1111 000 0135566666667776665311 00
Q ss_pred -------ccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccC
Q psy2378 175 -------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKN 238 (956)
Q Consensus 175 -------~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~ 238 (956)
...|.+|.......+...++++++++.. ++||+..|||.+++++.++...||+|++|+++...
T Consensus 171 ~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 171 DEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHAREIGSFADGVVVGSALVKL 240 (262)
T ss_dssp SSCEEEESSCC---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHHHHTTSSEEEECHHHHHH
T ss_pred CCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHHHHcCCCEEEECHHHHhh
Confidence 0001122110000011247889999987 89999999999999999954449999999987654
No 192
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=97.89 E-value=0.00011 Score=82.90 Aligned_cols=137 Identities=11% Similarity=0.064 Sum_probs=110.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEE
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 138 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 138 (956)
+.-|+-..+...+|+++++.|+.+.+. ||..+-+..|++ +++.-.+.+++||+++ +.++.+.
T Consensus 155 ~~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vD 219 (383)
T 3toy_A 155 RPIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLD 219 (383)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 344555555557999999999998888 999999987753 4667788999999987 5678888
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
...+|+. ++++++++.|++.|+++|. + ..++.+++..+++++.+ ++||++...+.++++
T Consensus 220 aN~~~~~----~~A~~~~~~l~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 278 (383)
T 3toy_A 220 FNQSLDP----AEATRRIARLADYDLTWIE---------------E-PVPQENLSGHAAVRERS-EIPIQAGENWWFPRG 278 (383)
T ss_dssp CTTCSCH----HHHHHHHHHHGGGCCSEEE---------------C-CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHH
T ss_pred CCCCCCH----HHHHHHHHHHHhhCCCEEE---------------C-CCCcchHHHHHHHHhhc-CCCEEeCCCcCCHHH
Confidence 7777763 5688999999999999883 1 12345899999999988 799999999999999
Q ss_pred HHHHhhh--cCEEEEccc
Q psy2378 219 IDLHLNY--IDGVMLGRE 234 (956)
Q Consensus 219 a~~~l~~--ad~VmiGR~ 234 (956)
+.++++. +|.|++--+
T Consensus 279 ~~~~i~~~a~d~v~ik~~ 296 (383)
T 3toy_A 279 FAEAIAAGASDFIMPDLM 296 (383)
T ss_dssp HHHHHHHTCCSEECCCTT
T ss_pred HHHHHHcCCCCEEEeCcc
Confidence 9999986 999876433
No 193
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.89 E-value=0.00016 Score=75.35 Aligned_cols=157 Identities=14% Similarity=0.219 Sum_probs=110.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCC--EEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc--cCccEEEEe
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYD--EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS--VEIDITVKH 139 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d--~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~~pv~vKi 139 (956)
..+..+|...|...+.+..+.+.++|+| .+|+--|.=++|.+ +| .++++++|+. .+.|+.+++
T Consensus 5 ~~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~---~G----------~~~v~~ir~~~~~~~~~dvhL 71 (228)
T 3ovp_A 5 CKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT---FG----------HPVVESLRKQLGQDPFFDMHM 71 (228)
T ss_dssp CEEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC---BC----------HHHHHHHHHHHCSSSCEEEEE
T ss_pred cEeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc---cC----------HHHHHHHHHhhCCCCcEEEEE
Confidence 3477889999999999999999999998 55554444344442 33 2467778877 478888887
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc--------------------------------c------------
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------------------------------F------------ 175 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~--------------------------------~------------ 175 (956)
-.. +. ..+++.+.++|+|.|++|.-.. .
T Consensus 72 mv~--~p------~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv 143 (228)
T 3ovp_A 72 MVS--KP------EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTV 143 (228)
T ss_dssp ECS--CG------GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESS
T ss_pred EeC--CH------HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeee
Confidence 652 11 1346677889999999985210 0
Q ss_pred cccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 176 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 176 ~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
..|+.|. . -.|..++.++++++..+++|+..-|||+ ++.+.++.+. ||.+.+||++...++....+
T Consensus 144 ~pGf~Gq--~-f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~ 210 (228)
T 3ovp_A 144 EPGFGGQ--K-FMEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRSEDPRSVI 210 (228)
T ss_dssp CTTTCSC--C-CCGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTCSCHHHHH
T ss_pred cCCCCCc--c-cCHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCCCCHHHHH
Confidence 0122111 1 1134567788898887679999999994 8999999988 99999999988776654443
No 194
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=97.87 E-value=7.7e-05 Score=84.43 Aligned_cols=133 Identities=16% Similarity=0.187 Sum_probs=108.2
Q ss_pred CCCEEEEecC---CCHHHHHHHHHHHHHc---CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--Ccc
Q psy2378 63 EHPIAFQVGD---NEPKKLAKSAKIIQKW---GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EID 134 (956)
Q Consensus 63 ~~p~~vQl~g---~~~~~~~~aA~~~~~~---G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~p 134 (956)
.-|+-..+.+ .+|+++++.|+.+.+. ||..|-+..|.+ +++.-.+.+++||+++ +.+
T Consensus 157 ~v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~ 221 (390)
T 3ugv_A 157 SVKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTA 221 (390)
T ss_dssp EEEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSE
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCE
Confidence 3455555555 7899999999988888 999999987753 4667778999999987 568
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCC
Q psy2378 135 ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK 214 (956)
Q Consensus 135 v~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~ 214 (956)
+.+....+|+. ++++++++.|++.|+++|.= . .++.+++..+++++.+ ++||++...+.
T Consensus 222 l~vDaN~~~~~----~~A~~~~~~l~~~~i~~iEq---------------P-~~~~d~~~~~~l~~~~-~iPIa~dE~~~ 280 (390)
T 3ugv_A 222 LMVDFNQGLDM----AEAMHRTRQIDDLGLEWIEE---------------P-VVYDNFDGYAQLRHDL-KTPLMIGENFY 280 (390)
T ss_dssp EEEECTTCCCH----HHHHHHHHHHTTSCCSEEEC---------------C-SCTTCHHHHHHHHHHC-SSCEEECTTCC
T ss_pred EEEECCCCCCH----HHHHHHHHHHHhhCCCEEEC---------------C-CCcccHHHHHHHHHhc-CCCEEeCCCcC
Confidence 88887777763 46889999999999998831 1 2345899999999988 79999999999
Q ss_pred CHHHHHHHhhh--cCEEEE
Q psy2378 215 TKKEIDLHLNY--IDGVML 231 (956)
Q Consensus 215 s~~da~~~l~~--ad~Vmi 231 (956)
+++++.++++. +|.|++
T Consensus 281 ~~~~~~~~i~~~a~d~v~i 299 (390)
T 3ugv_A 281 GPREMHQALQAGACDLVMP 299 (390)
T ss_dssp SHHHHHHHHHTTCCSEECC
T ss_pred CHHHHHHHHHcCCCCEEEe
Confidence 99999999986 998876
No 195
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.84 E-value=7e-05 Score=78.42 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=103.2
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~--gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
.++..|.+.|++.+.+.++.+.+.|+|.|++-. |.-.++. +...++++++++.++.|+.+-+-..
T Consensus 12 ~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~-------------~~~~~~i~~l~~~~~~~~~v~l~vn 78 (230)
T 1rpx_A 12 IVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-------------TIGPLVVDSLRPITDLPLDVHLMIV 78 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-------------CCCHHHHHHHGGGCCSCEEEEEESS
T ss_pred EEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCccccc-------------ccCHHHHHHHHhccCCcEEEEEEec
Confidence 367788899999999999999999999988853 2111221 1123677788887777766655332
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEccc--cc--------c--------------------cc------------cCC
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHAR--NA--------F--------------------LK------------KLN 180 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r--~~--------~--------------------~~------------g~~ 180 (956)
+ ..+.++.+.++|+|.|++|+- .. . .. +..
T Consensus 79 --d------~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~ 150 (230)
T 1rpx_A 79 --E------PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVN 150 (230)
T ss_dssp --S------HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSC
T ss_pred --C------HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEc
Confidence 1 124566677788888888865 20 0 00 000
Q ss_pred -CCCCCCCCcCcHHHHHHHHHhCC----CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHH
Q psy2378 181 -PKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 181 -~~~~~~~~~~~~~~i~~v~~~~~----~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~ 246 (956)
|.......+..++.++++++..+ ++|+++.|||+ ++.+.++++. ||+|.+|+++...|+....++
T Consensus 151 pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~ 221 (230)
T 1rpx_A 151 PGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDYAEAIK 221 (230)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCHHHHHH
Confidence 00000001112345566666542 68999999997 8889888887 999999999998777544443
No 196
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=97.84 E-value=0.00018 Score=81.35 Aligned_cols=134 Identities=10% Similarity=0.097 Sum_probs=108.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEecc
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~ 141 (956)
.-|+-..+...+++++++.|+.+.+.||..|-+..|+. +++.-.+.+++||+++ +.++.+....
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~ 201 (385)
T 3i6e_A 137 TIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQ 201 (385)
T ss_dssp EEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 34566677777899998888887778999999987642 3556678888998887 6678888888
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~ 221 (956)
+|+.. +++++++.|++.|+.+|. + ..++.+|+..+++++.. ++||.+...+.+++++.+
T Consensus 202 ~~~~~----~A~~~~~~L~~~~i~~iE---------------q-P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ 260 (385)
T 3i6e_A 202 GLEID----EAVPRVLDVAQFQPDFIE---------------Q-PVRAHHFELMARLRGLT-DVPLLADESVYGPEDMVR 260 (385)
T ss_dssp CCCGG----GHHHHHHHHHTTCCSCEE---------------C-CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHH
T ss_pred CCCHH----HHHHHHHHHHhcCCCEEE---------------C-CCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHHHH
Confidence 88753 478999999999999883 1 12346899999999987 799999999999999999
Q ss_pred Hhhh--cCEEEEc
Q psy2378 222 HLNY--IDGVMLG 232 (956)
Q Consensus 222 ~l~~--ad~VmiG 232 (956)
+++. +|.|++-
T Consensus 261 ~~~~~~~d~v~~k 273 (385)
T 3i6e_A 261 AAHEGICDGVSIK 273 (385)
T ss_dssp HHHHTCCSEEEEC
T ss_pred HHHcCCCCEEEec
Confidence 9976 9999873
No 197
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=97.84 E-value=0.00014 Score=81.73 Aligned_cols=132 Identities=14% Similarity=0.196 Sum_probs=106.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChH-HHHHHHHHHhhcc--CccEEEE
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPL-LVSDCIKAMRDSV--EIDITVK 138 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~-~~~eiv~~v~~~~--~~pv~vK 138 (956)
.-|+...+...+|+++++.|+.+.+. ||..+-+..|+. +. .-.+++++||+++ +.++.+.
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~----------------~~~~d~~~v~avR~a~g~~~~l~vD 191 (367)
T 3dg3_A 128 RMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRR----------------PVQLDTAVVRALRERFGDAIELYVD 191 (367)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCS----------------STHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCC----------------hhhhHHHHHHHHHHHhCCCCEEEEE
Confidence 34556677778999999999888887 999999987642 22 4567889999987 4678777
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 218 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d 218 (956)
...+|+. +++.++++.|++.|+++|.= ..++.+++..+++++.+ ++||++.+.+.++++
T Consensus 192 an~~~~~----~~a~~~~~~l~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 250 (367)
T 3dg3_A 192 GNRGWSA----AESLRAMREMADLDLLFAEE----------------LCPADDVLSRRRLVGQL-DMPFIADESVPTPAD 250 (367)
T ss_dssp CTTCSCH----HHHHHHHHHTTTSCCSCEES----------------CSCTTSHHHHHHHHHHC-SSCEEECTTCSSHHH
T ss_pred CCCCCCH----HHHHHHHHHHHHhCCCEEEC----------------CCCcccHHHHHHHHHhC-CCCEEecCCcCCHHH
Confidence 7777763 56889999999999998841 12245899999999988 799999999999999
Q ss_pred HHHHhhh--cCEEEE
Q psy2378 219 IDLHLNY--IDGVML 231 (956)
Q Consensus 219 a~~~l~~--ad~Vmi 231 (956)
++++++. +|.|++
T Consensus 251 ~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 251 VTREVLGGSATAISI 265 (367)
T ss_dssp HHHHHHHTSCSEEEE
T ss_pred HHHHHHcCCCCEEEe
Confidence 9999986 999987
No 198
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=97.84 E-value=0.00056 Score=68.58 Aligned_cols=133 Identities=11% Similarity=0.057 Sum_probs=100.9
Q ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHHcccCCCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhCCC
Q psy2378 669 HTIFIGGGTPSLISDTGLDYLLKNIKKLLLFKKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRT 748 (956)
Q Consensus 669 ~~i~fgggtPs~L~~~~l~~ll~~i~~~~~~~~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~R~ 748 (956)
..|.|.||-|+. .++.+..+++.+++. ...+++.+|-. ++++.++.|.+. ++.+.+.+.+.+++..+.+..
T Consensus 5 ~~v~~tGGEPll-~~~~~~~l~~~~~~~-----g~~~~l~TNG~-l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g- 75 (182)
T 3can_A 5 GGVTFCGGEPLL-HPEFLIDILKRCGQQ-----GIHRAVDTTLL-ARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCD- 75 (182)
T ss_dssp CCEEECSSTGGG-SHHHHHHHHHHHHHT-----TCCEEEECTTC-CCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS-
T ss_pred CEEEEEcccccC-CHHHHHHHHHHHHHC-----CCcEEEECCCC-CCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC-
Confidence 357888999876 455567788887763 24678888876 678888888877 889999999999998877643
Q ss_pred CCHHHHHHHHHHHHhcCCeeEEEEeecCCC--CCHHHHHHHHHHHHcc-CC-CeEEEEeeeccCCcc
Q psy2378 749 HDSKQAKYAIEIAKQYFNNFNLDLIYALPN--QTLSELMLDLNYAIQY-SP-PHLSLYSLTIEPNTY 811 (956)
Q Consensus 749 ~~~~~~~~ai~~l~~~~~~i~~dlI~GlPg--qT~e~~~~tl~~~~~l-~~-~~i~~y~l~~~pgT~ 811 (956)
.+.+.+.++++.+++.+..+.+-+.+ .|| ++.+++.+.++++.++ ++ ..+.+.++.|.....
T Consensus 76 ~~~~~i~~~i~~l~~~g~~v~i~~~v-~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~ 141 (182)
T 3can_A 76 VPNELILKNIRRVAEADFPYYIRIPL-IEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGK 141 (182)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEEE-CBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECCC-----
T ss_pred CCHHHHHHHHHHHHhCCCeEEEEEEE-ECCCCCCHHHHHHHHHHHHhCcCccceEEEecCcccCHHH
Confidence 34589999999999887766665544 355 6889999999999999 88 899999998876654
No 199
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=97.83 E-value=0.00017 Score=81.08 Aligned_cols=145 Identities=14% Similarity=0.179 Sum_probs=114.2
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g 142 (956)
|+...+...+|+++++.|+.+.+.||..|-+..|+ +++.-.+.+++||+++ +.++.+....+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG----------------SKELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 44567778899999999999889999999998764 2566678899999988 46788777667
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+. ++++++++.|++.|+++|.= ..++.+++..+++++.. ++||++.+.+.++++++++
T Consensus 195 ~~~----~~A~~~~~~l~~~~i~~iEq----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~ 253 (368)
T 3q45_A 195 WSV----ETAIETLTLLEPYNIQHCEE----------------PVSRNLYTALPKIRQAC-RIPIMADESCCNSFDAERL 253 (368)
T ss_dssp BCH----HHHHHHHHHHGGGCCSCEEC----------------CBCGGGGGGHHHHHHTC-SSCEEESTTCCSHHHHHHH
T ss_pred CCh----HHHHHHHHHHhhcCCCEEEC----------------CCChhHHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHH
Confidence 763 56889999999999998841 11235788889999987 7999999999999999999
Q ss_pred hhh--cCEEEEccccccCCcchHHHH
Q psy2378 223 LNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 223 l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
++. +|.|++--+-.+...=..++.
T Consensus 254 ~~~~~~d~v~~k~~~~GGit~~~~i~ 279 (368)
T 3q45_A 254 IQIQACDSFNLKLSKSAGITNALNII 279 (368)
T ss_dssp HHTTCCSEEEECTTTTTSHHHHHHHH
T ss_pred HHcCCCCeEEechhhcCCHHHHHHHH
Confidence 986 999998555544444333333
No 200
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.82 E-value=6.6e-05 Score=78.57 Aligned_cols=160 Identities=16% Similarity=0.162 Sum_probs=106.7
Q ss_pred EEEEecCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCC
Q psy2378 66 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 143 (956)
Q Consensus 66 ~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~--gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 143 (956)
++.+|...|...+.+..+.+.++|+|.|++-. |.-.+ +..+-.++++++|+.++.|+.+-+=..
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp-------------~~~~g~~~v~~lr~~~~~~~~vhlmv~- 72 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVP-------------NITIGPLIVDAIRPLTKKTLDVHLMIV- 72 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS-------------CBCBCHHHHHHHGGGCCSEEEEEEESS-
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCc-------------chhhhHHHHHHHHhhcCCcEEEEEEcc-
Confidence 67899999999999999999999999876642 22111 122223788999988877887655442
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEccc--cc--------------c-----c-------------cc---------CC
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFIVHAR--NA--------------F-----L-------------KK---------LN 180 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~vh~r--~~--------------~-----~-------------~g---------~~ 180 (956)
+. .++++.+.++|+|.+++|.- .. . . .+ +.
T Consensus 73 dp-------~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~p 145 (230)
T 1tqj_A 73 EP-------EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNP 145 (230)
T ss_dssp SG-------GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC
T ss_pred CH-------HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEecc
Confidence 21 13456677778888887755 10 0 0 00 00
Q ss_pred CCCCCCCCcCcHHHHHHHHHhCC----CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHH
Q psy2378 181 PKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 181 ~~~~~~~~~~~~~~i~~v~~~~~----~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+.....-.+..++.++++++..+ ++||.+-|||+. +.+.++.+. ||++.+|++++..|+.-..+++
T Consensus 146 g~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~ 216 (230)
T 1tqj_A 146 GFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNYAEAIAG 216 (230)
T ss_dssp ----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred ccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHH
Confidence 00010112345677888877652 699999999986 889999887 9999999999988775444443
No 201
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=97.82 E-value=5.3e-05 Score=85.44 Aligned_cols=126 Identities=11% Similarity=0.102 Sum_probs=99.9
Q ss_pred EEEEecC-CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCC
Q psy2378 66 IAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGI 143 (956)
Q Consensus 66 ~~vQl~g-~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~ 143 (956)
+...+.. .+++++++.|+.+.+.||+.|.++.+ |+...+++++||+++ ++++.+....+|
T Consensus 139 ~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~ 200 (375)
T 1r0m_A 139 VGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK------------------PGWDVQPVRATREAFPDIRLTVDANSAY 200 (375)
T ss_dssp BCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCC
T ss_pred eeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC------------------hHHHHHHHHHHHHHcCCCeEEEeCCCCC
Confidence 3344433 48999999999999999999999852 233456678888776 577888877777
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHh
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL 223 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l 223 (956)
+. ++ +++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++.+.+.+++++++++
T Consensus 201 ~~----~~-~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i 258 (375)
T 1r0m_A 201 TL----AD-AGRLRQLDEYDLTYIE---------------QP-LAWDDLVDHAELARRI-RTPLCLDESVASASDARKAL 258 (375)
T ss_dssp CG----GG-HHHHHTTGGGCCSCEE---------------CC-SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHHHH
T ss_pred CH----HH-HHHHHHHHhCCCcEEE---------------CC-CCcccHHHHHHHHHhC-CCCEEecCccCCHHHHHHHH
Confidence 64 35 7899999999999884 11 1346899999999988 79999999999999999999
Q ss_pred hh--cCEEEE
Q psy2378 224 NY--IDGVML 231 (956)
Q Consensus 224 ~~--ad~Vmi 231 (956)
+. ||.|++
T Consensus 259 ~~~~~d~v~i 268 (375)
T 1r0m_A 259 ALGAGGVINL 268 (375)
T ss_dssp HHTSCSEEEE
T ss_pred HhCCCCEEEE
Confidence 87 999998
No 202
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.82 E-value=0.00047 Score=73.69 Aligned_cols=145 Identities=12% Similarity=0.141 Sum_probs=104.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+.|++..=|.-++.++.+| ..+|+|+|=|...+ + +++.+.++++..++ .|..+.+-+.
T Consensus 113 ~lPvl~kdfiid~~qv~~A----~~~GAD~VlLi~a~--------------l-~~~~l~~l~~~a~~-lGl~~lvev~-- 170 (272)
T 3qja_A 113 SIPVLRKDFVVQPYQIHEA----RAHGADMLLLIVAA--------------L-EQSVLVSMLDRTES-LGMTALVEVH-- 170 (272)
T ss_dssp SSCEEEESCCCSHHHHHHH----HHTTCSEEEEEGGG--------------S-CHHHHHHHHHHHHH-TTCEEEEEES--
T ss_pred CCCEEECccccCHHHHHHH----HHcCCCEEEEeccc--------------C-CHHHHHHHHHHHHH-CCCcEEEEcC--
Confidence 5688776667777655443 35899999885321 1 25567777777765 5777765442
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~ 221 (956)
+. .+ ++.+.+.|++.|-+.+|.. .. .+.+++.+.++++.+| ++||++.|||.|++|+.+
T Consensus 171 -----t~---ee-~~~A~~~Gad~IGv~~r~l--~~---------~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~ 230 (272)
T 3qja_A 171 -----TE---QE-ADRALKAGAKVIGVNARDL--MT---------LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLA 230 (272)
T ss_dssp -----SH---HH-HHHHHHHTCSEEEEESBCT--TT---------CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHH
T ss_pred -----CH---HH-HHHHHHCCCCEEEECCCcc--cc---------cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHH
Confidence 11 23 3344577999999998752 11 1246777888888776 699999999999999999
Q ss_pred Hhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 222 HLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 222 ~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
+++. +|+|.+|++++..++.-..+++..
T Consensus 231 l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 231 YAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp HHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred HHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 9988 999999999999888766666543
No 203
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=97.80 E-value=0.00021 Score=80.71 Aligned_cols=138 Identities=14% Similarity=0.180 Sum_probs=111.8
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEE
Q psy2378 61 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 138 (956)
Q Consensus 61 ~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vK 138 (956)
.+.-|+-..+...+|+++++.|+.+.+.||..|-+..|||.. ..+++.-.+.+++||+++ ++++.+.
T Consensus 132 ~~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vD 200 (386)
T 3fv9_G 132 AGPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLAD 200 (386)
T ss_dssp SSCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CCceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 456678888889999999999999999999999999998731 124677788999999998 4678888
Q ss_pred eccCCCCCCcHHHHHHHHHHH-HHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH
Q psy2378 139 HRIGIDDINSYDFVRDFVGTV-SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 217 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l-~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~ 217 (956)
...+|+. +++.++++.| ++.++ +|. +. ..+|+..+++++.. ++||.+...+.+++
T Consensus 201 aN~~~~~----~~A~~~~~~l~~~~~i-~iE---------------eP---~~~~~~~~~l~~~~-~iPIa~dE~~~~~~ 256 (386)
T 3fv9_G 201 ANNGLTV----EHALRMLSLLPPGLDI-VLE---------------AP---CASWAETKSLRARC-ALPLLLDELIQTET 256 (386)
T ss_dssp CTTCCCH----HHHHHHHHHSCSSCCC-EEE---------------CC---CSSHHHHHHHHTTC-CSCEEESTTCCSHH
T ss_pred CCCCCCH----HHHHHHHHHhhccCCc-EEe---------------cC---CCCHHHHHHHHhhC-CCCEEeCCCcCCHH
Confidence 7777763 4578899999 66666 652 11 12888899999987 79999999999999
Q ss_pred HHHHHhhh--cCEEEEcc
Q psy2378 218 EIDLHLNY--IDGVMLGR 233 (956)
Q Consensus 218 da~~~l~~--ad~VmiGR 233 (956)
++.++++. +|.|++--
T Consensus 257 ~~~~~~~~~a~d~v~~k~ 274 (386)
T 3fv9_G 257 DLIAAIRDDLCDGVGLKV 274 (386)
T ss_dssp HHHHHHHTTCCSEEEEEH
T ss_pred HHHHHHHhCCCCEEEECc
Confidence 99999986 99998743
No 204
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=97.79 E-value=7.2e-05 Score=85.63 Aligned_cols=161 Identities=8% Similarity=0.014 Sum_probs=118.2
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCccccc---cc-----------------CChHHHH
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI---LM-----------------TKPLLVS 121 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~---l~-----------------~~~~~~~ 121 (956)
+.-|+-..+.+.+|+++++.|+.+.+.||..|-+..|.|-. ...||.. .- .+.+...
T Consensus 138 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~---~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 214 (425)
T 3vcn_A 138 TGVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGL---ASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVP 214 (425)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---SCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccc---cccccccccccccCcccccccccccccchhHHHHHH
Confidence 34455556678899999999999999999999998886421 0111110 00 0134567
Q ss_pred HHHHHHhhcc--CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHH
Q psy2378 122 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 199 (956)
Q Consensus 122 eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~ 199 (956)
+++++||+++ ++++.+....+|+. ++++++++.|++.|+++|.- ..++.+++..++++
T Consensus 215 e~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEq----------------P~~~~d~~~~~~l~ 274 (425)
T 3vcn_A 215 KLFERAREVLGWDVHLLHDVHHRLTP----IEAARLGKDLEPYRLFWLED----------------SVPAENQAGFRLIR 274 (425)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCH----HHHHHHHHHHGGGCCSEEEC----------------CSCCSSTTHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCCH----HHHHHHHHHHHhcCCCEEEC----------------CCChhhHHHHHHHH
Confidence 8899999998 56888877667753 56889999999999999841 01235788899999
Q ss_pred HhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 200 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 200 ~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
+.+ ++||++.+.+.++++++++++. ||.|++--+-.+...=..++.
T Consensus 275 ~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia 322 (425)
T 3vcn_A 275 QHT-TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIA 322 (425)
T ss_dssp HHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred hcC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHH
Confidence 988 7999999999999999999986 999988655555544444444
No 205
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=97.79 E-value=9.4e-05 Score=84.62 Aligned_cols=162 Identities=10% Similarity=0.060 Sum_probs=120.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCccccc------------------c--cCChHHHH
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI------------------L--MTKPLLVS 121 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~------------------l--~~~~~~~~ 121 (956)
+.-|+-..+.+.+|+++++.|+.+.+.||..|-+..|-|... ..||.. + ..+.+...
T Consensus 137 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~---~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 213 (424)
T 3v3w_A 137 ERILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIA---KTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIP 213 (424)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS---CCTTCC-----CCSCCBSSCCEEEECHHHHHHHHH
T ss_pred CceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCcccc---ccccccccccccccccccccccccccchhHHHHHH
Confidence 344555556788999999999999999999999988864210 011110 0 01256788
Q ss_pred HHHHHHhhcc--CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHH
Q psy2378 122 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 199 (956)
Q Consensus 122 eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~ 199 (956)
+++++||+++ +.++.+....+|+. ++++++++.|++.|+++|.- ..++.+++..++++
T Consensus 214 e~v~avR~avG~d~~l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEq----------------P~~~~d~~~~~~l~ 273 (424)
T 3v3w_A 214 DVFAAVRKEFGPDIHLLHDVHHRLTP----IEAARLGKALEPYHLFWMED----------------AVPAENQESFKLIR 273 (424)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCH----HHHHHHHHHHGGGCCSEEEC----------------CSCCSSTTHHHHHH
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCCH----HHHHHHHHHHHhcCCCEEEC----------------CCChHhHHHHHHHH
Confidence 9999999998 57888877777753 56889999999999999841 01235788899999
Q ss_pred HhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 200 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 200 ~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+.+ ++||++.+.+.++++++++++. ||.|++--+-.+...=..++.+
T Consensus 274 ~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~ 322 (424)
T 3v3w_A 274 QHT-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIAD 322 (424)
T ss_dssp HHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred hhC-CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHH
Confidence 988 7999999999999999999986 9999886655555544444443
No 206
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.77 E-value=0.00022 Score=73.93 Aligned_cols=184 Identities=13% Similarity=0.035 Sum_probs=114.9
Q ss_pred EccCcCcCCHHHHHHH---HHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEe---cCC-CHHHHHHHHHHHHH
Q psy2378 15 IAPMMNLTDRHCRMFH---RQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQV---GDN-EPKKLAKSAKIIQK 87 (956)
Q Consensus 15 lAPM~~~td~~fR~~~---~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl---~g~-~~~~~~~aA~~~~~ 87 (956)
|.|. .|...++.+| +++|-..+|+.+-.... ..+.+. ..+-++..=+ +|. ..+.-+.-++.+.+
T Consensus 36 L~p~--~t~~~i~~lc~eA~~~~~~aVcV~p~~v~~-----a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 106 (239)
T 3ngj_A 36 LKAD--ATEEQIRKLCSEAAEYKFASVCVNPTWVPL-----CAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVE 106 (239)
T ss_dssp CCTT--CCHHHHHHHHHHHHHHTCSEEEECGGGHHH-----HHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHhcCCcEEEECHHHHHH-----HHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHH
Confidence 5553 4556677766 56775445554422111 111121 1122222222 144 44555666677778
Q ss_pred cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEe--ccCCCCCCcHHHHHHHHHHHHHcCCC
Q psy2378 88 WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH--RIGIDDINSYDFVRDFVGTVSSAGCR 165 (956)
Q Consensus 88 ~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi--r~g~~~~~~~~~~~~~a~~l~~~G~~ 165 (956)
.|+|.||+.. .+|.-...+.+.+.+=+++|++.++- ..+|+ -.+. .+.++....++...++|+|
T Consensus 107 ~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~---Lt~eei~~a~~ia~~aGAD 172 (239)
T 3ngj_A 107 QGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCY---LTNEEKVEVCKRCVAAGAE 172 (239)
T ss_dssp TTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGG---SCHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCC---CCHHHHHHHHHHHHHHCcC
Confidence 8999999864 35555556888899989999988852 24453 3332 1234677888889999999
Q ss_pred EEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 166 TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 166 ~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
+|-.+.+. + .+.+..+.++-+++.+ ++++|-++|||.|.+|+.++++. |+-+...+
T Consensus 173 fVKTSTGf------~------~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 173 YVKTSTGF------G------THGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp EEECCCSS------S------SCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred EEECCCCC------C------CCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccceeccc
Confidence 99876432 1 1235666666666544 25899999999999999999988 88554443
No 207
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.76 E-value=0.00052 Score=73.09 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=111.7
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+-|+..+=|..++.+..+ +..+|+|+|=|+..+ + +++.+.++++..++ .|..+.|-+..
T Consensus 120 ~lPVl~Kdfi~d~~qi~e----a~~~GAD~VlLi~a~--------------L-~~~~l~~l~~~a~~-lGl~~lvevh~- 178 (272)
T 3tsm_A 120 SLPALRKDFLFDPYQVYE----ARSWGADCILIIMAS--------------V-DDDLAKELEDTAFA-LGMDALIEVHD- 178 (272)
T ss_dssp SSCEEEESCCCSTHHHHH----HHHTTCSEEEEETTT--------------S-CHHHHHHHHHHHHH-TTCEEEEEECS-
T ss_pred CCCEEECCccCCHHHHHH----HHHcCCCEEEEcccc--------------c-CHHHHHHHHHHHHH-cCCeEEEEeCC-
Confidence 568887777778876443 457899999987532 1 45678888888776 47766665531
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~ 221 (956)
..+ ++++.+.|++.|-+..|.. ..+ ..|++...++.+.+| ++|||+-|||.|++|+.+
T Consensus 179 ---------~eE-l~~A~~~ga~iIGinnr~l--~t~---------~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~ 237 (272)
T 3tsm_A 179 ---------EAE-MERALKLSSRLLGVNNRNL--RSF---------EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLR 237 (272)
T ss_dssp ---------HHH-HHHHTTSCCSEEEEECBCT--TTC---------CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHH
T ss_pred ---------HHH-HHHHHhcCCCEEEECCCCC--ccC---------CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHH
Confidence 123 3556689999999988862 111 257888888888876 599999999999999999
Q ss_pred Hhhh-cCEEEEccccccCCcchHHHHHhhcc
Q psy2378 222 HLNY-IDGVMLGREAYKNPFLMSNFDLNYYS 251 (956)
Q Consensus 222 ~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~~ 251 (956)
+.+. +|+|.||.+++..|+.-..+++.+.+
T Consensus 238 l~~~Ga~gvLVG~almr~~d~~~~~~~l~~g 268 (272)
T 3tsm_A 238 LEKSGIGTFLIGESLMRQHDVAAATRALLTG 268 (272)
T ss_dssp HHTTTCCEEEECHHHHTSSCHHHHHHHHHHC
T ss_pred HHHcCCCEEEEcHHHcCCcCHHHHHHHHHhc
Confidence 9988 99999999999999998888875544
No 208
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.76 E-value=5.6e-05 Score=80.97 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=69.7
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++++.++++|+++|.++..... + . ....+++.++++++.+ ++||+.+|+|.++++++++++. ||+|+
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~--~------~-~~g~~~~~i~~i~~~~-~iPvi~~ggi~~~~~i~~~~~~Gad~v~ 101 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRD--G------T-KSGYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADKAL 101 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTS--S------C-SSCCCHHHHHHHGGGC-CSCEEEESCCCSTHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEEecCcc--c------C-CCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCcHhh
Confidence 678999999999999999765421 1 0 1124899999999987 7999999999999999999988 99999
Q ss_pred Eccccc-c--CCcchHHHHH
Q psy2378 231 LGREAY-K--NPFLMSNFDL 247 (956)
Q Consensus 231 iGR~~l-~--~P~l~~~i~~ 247 (956)
+|+.++ . +|+.+.++.+
T Consensus 102 lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 102 AASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CCCCC------CHHHHHHCC
T ss_pred hhHHHHhCCCCHHHHHHHHH
Confidence 999999 6 9998888754
No 209
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=97.75 E-value=8.5e-05 Score=83.60 Aligned_cols=127 Identities=10% Similarity=0.083 Sum_probs=99.7
Q ss_pred CEEEEecC-CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccC
Q psy2378 65 PIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g-~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 142 (956)
|+...+.. .+++++++.|+.+.+.||+.|.++.| |+...+.+++||+++ ++++.+....+
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~ 192 (369)
T 2zc8_A 131 EVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK------------------PGWDYEVLKAVREAFPEATLTADANSA 192 (369)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTC
T ss_pred eceEEecCCCCHHHHHHHHHHHHHhhhheeeeecC------------------hhHHHHHHHHHHHHcCCCeEEEecCCC
Confidence 33344433 48999999999999999999999853 233456678888776 57788877777
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+. ++ +++++.|++.|+++|. +. .++.+|+..+++++.+ ++||++.+.+.++++++++
T Consensus 193 ~~~----~~-~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~ 250 (369)
T 2zc8_A 193 YSL----AN-LAQLKRLDELRLDYIE---------------QP-LAYDDLLDHAKLQREL-STPICLDESLTGAEKARKA 250 (369)
T ss_dssp CCG----GG-HHHHHGGGGGCCSCEE---------------CC-SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHHH
T ss_pred CCH----HH-HHHHHHHHhCCCcEEE---------------CC-CCcccHHHHHHHHhhC-CCCEEEcCccCCHHHHHHH
Confidence 754 34 6899999999999885 11 1246889999999988 7999999999999999999
Q ss_pred hhh--cCEEEE
Q psy2378 223 LNY--IDGVML 231 (956)
Q Consensus 223 l~~--ad~Vmi 231 (956)
++. +|.|++
T Consensus 251 i~~~~~d~v~i 261 (369)
T 2zc8_A 251 IELGAGRVFNV 261 (369)
T ss_dssp HHHTCCSEEEE
T ss_pred HHhCCCCEEEE
Confidence 987 999987
No 210
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=97.74 E-value=0.00038 Score=78.23 Aligned_cols=141 Identities=13% Similarity=0.138 Sum_probs=108.3
Q ss_pred CCEEEEecCCCHH-HHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEec
Q psy2378 64 HPIAFQVGDNEPK-KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~-~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir 140 (956)
-|+...+...+++ .+.++++.+++.||..+-+..|++ +++.-.+.+++||++++ .++.+...
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 3444455555554 456666666668999999987752 46667888999999984 78999988
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+.. ++.++++.|++.|+++|. + ..++.+|+..+++++.. ++||++.+.+.+++++.
T Consensus 197 ~~~~~~----~a~~~~~~l~~~~i~~iE---------------q-P~~~~~~~~~~~l~~~~-~iPia~dE~~~~~~~~~ 255 (370)
T 1chr_A 197 QAWDEQ----VASVYIPELEALGVELIE---------------Q-PVGRENTQALRRLSDNN-RVAIMADESLSTLASAF 255 (370)
T ss_dssp TCCCTT----HHHHHTHHHHTTTEEEEE---------------C-CSCTTCHHHHHHHHHHS-CSEEEESSSCCSHHHHH
T ss_pred CCCCHH----HHHHHHHHHHhcCCCEEE---------------C-CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHH
Confidence 888753 478999999999998884 1 12346899999999988 79999999999999999
Q ss_pred HHhhh--cCEEEEccccccCCc
Q psy2378 221 LHLNY--IDGVMLGREAYKNPF 240 (956)
Q Consensus 221 ~~l~~--ad~VmiGR~~l~~P~ 240 (956)
++++. +|.|++--+-.+...
T Consensus 256 ~~~~~~~~d~v~~k~~~~GGit 277 (370)
T 1chr_A 256 DLARDRSVDVFSLKLCNMGGVS 277 (370)
T ss_dssp HHHTTTSCSEEEECTTTSCSHH
T ss_pred HHHHcCCCCEEEECccccCCHH
Confidence 99986 999998555444433
No 211
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.74 E-value=0.00012 Score=75.95 Aligned_cols=157 Identities=17% Similarity=0.201 Sum_probs=97.5
Q ss_pred EEEEecCCCHHHHHHHHHHHHHcCCCEEEecC--CC-CcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 66 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GC-PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 66 ~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~--gC-P~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+...|...|+..+.++++.+.+.|+|.|.+-. |. | ....+-.++++++++.++.|+.+-+-..
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~--------------~~~~~g~~~i~~i~~~~~~~~~v~l~v~ 71 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFV--------------PNISFGADVVASMRKHSKLVFDCHLMVV 71 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSS--------------SCBCBCHHHHHHHHTTCCSEEEEEEESS
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCC--------------CccccCHHHHHHHHHhCCCCEEEEEeec
Confidence 66778889999999999999999999977643 32 1 1111113566777776666665544332
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEccccc----------------------------ccc------------cCC-C
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNA----------------------------FLK------------KLN-P 181 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~----------------------------~~~------------g~~-~ 181 (956)
+.. +.++.+.++|+|.+++|+... ... +.. +
T Consensus 72 --d~~------~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g 143 (220)
T 2fli_A 72 --DPE------RYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPG 143 (220)
T ss_dssp --SGG------GGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTT
T ss_pred --CHH------HHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCC
Confidence 111 123667778888888874210 000 000 0
Q ss_pred CCCCCCCcCcHHHHHHHHHhCC----CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 182 KQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 182 ~~~~~~~~~~~~~i~~v~~~~~----~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
.......+..++.++++++..+ ++|+++.|||+ ++++.++++. +|+|.+||++...++....+
T Consensus 144 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~ 211 (220)
T 2fli_A 144 FGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDLVSQV 211 (220)
T ss_dssp CSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHH
T ss_pred CcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCHHHHH
Confidence 0000111112344566665432 68999999998 8999888886 99999999999877754333
No 212
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=97.74 E-value=0.00028 Score=79.43 Aligned_cols=134 Identities=7% Similarity=0.100 Sum_probs=108.9
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEe
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKH 139 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKi 139 (956)
+.-|+-..++..+|+++++.|+.+.+.||..+-+..|. +++.-.+.+++||++++ .++.+..
T Consensus 130 ~~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDa 193 (379)
T 3r0u_A 130 NSIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDA 193 (379)
T ss_dssp CEEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEEC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeC
Confidence 33455667777899999999998888999999998762 46677889999999984 6888887
Q ss_pred ccCCCCCCcHHHHHHHHHHHHH--cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSS--AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 217 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~--~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~ 217 (956)
..+|+. ++++++++.|++ .|+.+|. + ..++.+++..+++++.. ++||.+...+.+++
T Consensus 194 N~~w~~----~~A~~~~~~l~~~~~~l~~iE---------------e-P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 252 (379)
T 3r0u_A 194 NQGWNL----AQTKQFIEEINKYSLNVEIIE---------------Q-PVKYYDIKAMAEITKFS-NIPVVADESVFDAK 252 (379)
T ss_dssp TTCCCH----HHHHHHHHHHHTSCCCEEEEE---------------C-CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHH
T ss_pred CCCcCH----HHHHHHHHHHhhcCCCcEEEE---------------C-CCCcccHHHHHHHHhcC-CCCEEeCCccCCHH
Confidence 777763 468899999999 7777773 1 12346899999999988 69999999999999
Q ss_pred HHHHHhhh--cCEEEEc
Q psy2378 218 EIDLHLNY--IDGVMLG 232 (956)
Q Consensus 218 da~~~l~~--ad~VmiG 232 (956)
++.++++. +|.|++-
T Consensus 253 ~~~~~i~~~a~d~v~~k 269 (379)
T 3r0u_A 253 DAERVIDEQACNMINIK 269 (379)
T ss_dssp HHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHcCCCCEEEEC
Confidence 99999986 9999873
No 213
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.74 E-value=0.00041 Score=73.76 Aligned_cols=138 Identities=15% Similarity=0.080 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc--CCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI--GIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--g~~~~~~~~ 150 (956)
...+.-+.-++.+.+.|+|.||+.. .+|.....+.+.+.+-+++|++.++.|+ +|+=+ +.- +.+
T Consensus 123 ~~~~~Kv~Ea~~Ai~~GAdEIDmVI----------Nig~lk~g~~~~v~~eI~~V~~a~~~~~-lKVIlEt~~L---t~e 188 (288)
T 3oa3_A 123 YSTDQKVSEAKRAMQNGASELDMVM----------NYPWLSEKRYTDVFQDIRAVRLAAKDAI-LKVILETSQL---TAD 188 (288)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSE-EEEECCGGGC---CHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEe----------ehhhhcCCcHHHHHHHHHHHHHHhcCCC-ceEEEECCCC---CHH
Confidence 3445556666778889999999532 2455555688899999999999987663 66433 321 234
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cCE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDG 228 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad~ 228 (956)
+....++...++|+|+|-.+.+ |++. . .-+.+...++++.+.+ +++||.+.|||.+.+++.++++. |+-
T Consensus 189 ei~~A~~ia~eaGADfVKTSTG------f~~~--G-AT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~R 259 (288)
T 3oa3_A 189 EIIAGCVLSSLAGADYVKTSTG------FNGP--G-ASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAER 259 (288)
T ss_dssp HHHHHHHHHHHTTCSEEECCCS------SSSC--C-CCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEcCCC------CCCC--C-CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 5778888999999999977632 2110 0 0112555566655421 36999999999999999999998 995
Q ss_pred EEEcc
Q psy2378 229 VMLGR 233 (956)
Q Consensus 229 VmiGR 233 (956)
+...+
T Consensus 260 iGtS~ 264 (288)
T 3oa3_A 260 LGASA 264 (288)
T ss_dssp EEESC
T ss_pred eehhh
Confidence 54433
No 214
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.73 E-value=0.00057 Score=72.85 Aligned_cols=135 Identities=11% Similarity=0.113 Sum_probs=92.1
Q ss_pred HHHHHHHHcCCCEEEecC--CCCcceeeeCcccccccCChHHHHHHHHHHhhcc---CccEEEEecc-CCCCC--CcHHH
Q psy2378 80 KSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRI-GIDDI--NSYDF 151 (956)
Q Consensus 80 ~aA~~~~~~G~d~IeiN~--gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~-g~~~~--~~~~~ 151 (956)
..++.+.+.|+|+|++.. |. .+.+.+.+-++++++.+ ++|+.+=..+ |.+-. .+.+.
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~---------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~ 160 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGS---------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEI 160 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTS---------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCC---------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHH
Confidence 345567778999999843 41 12344555555555443 7888765433 11110 13344
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCC--CHHHHHHHh----hh
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK--TKKEIDLHL----NY 225 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~--s~~da~~~l----~~ 225 (956)
..+.++...++|+|+|-+. + +.+.+.++++++.++.+||++.|||. +.+++.+++ +.
T Consensus 161 i~~a~~~a~~~GAD~vkt~--~---------------~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~a 223 (263)
T 1w8s_A 161 VAYAARIALELGADAMKIK--Y---------------TGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEA 223 (263)
T ss_dssp HHHHHHHHHHHTCSEEEEE--C---------------CSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEc--C---------------CCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 5566788999999999775 1 02567788888887434999999999 999998888 44
Q ss_pred -cCEEEEccccccCCcchHHHH
Q psy2378 226 -IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 226 -ad~VmiGR~~l~~P~l~~~i~ 246 (956)
|+|+.+||.++..|+....++
T Consensus 224 GA~GvsvgraI~~~~dp~~~~~ 245 (263)
T 1w8s_A 224 GALGIAVGRNVWQRRDALKFAR 245 (263)
T ss_dssp TCCEEEESHHHHTSTTHHHHHH
T ss_pred CCeEEEEehhhcCCcCHHHHHH
Confidence 999999999999888544443
No 215
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=97.73 E-value=0.00017 Score=82.75 Aligned_cols=165 Identities=8% Similarity=0.043 Sum_probs=119.8
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcce-----------eeeCc------------ccccc--cCC
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----------VQNGF------------FGAIL--MTK 116 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~-----------~~~~~------------~G~~l--~~~ 116 (956)
+.-|+-..+.+.+|+++++.|+.+.+.||..+-+..|-.-.. +..+. -|..+ ..+
T Consensus 143 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (440)
T 3t6c_A 143 DGIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAY 222 (440)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHH
T ss_pred CeeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhh
Confidence 344555567789999999999999999999999988742100 00000 00000 011
Q ss_pred hHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHH
Q psy2378 117 PLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF 194 (956)
Q Consensus 117 ~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~ 194 (956)
.+...+++++||+++ ++++.|....+|+. ++++++++.|++.|+.+|.= . .++.+++.
T Consensus 223 ~~~d~~~v~avR~a~G~d~~L~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEe---------------P-~~~~d~~~ 282 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVELLHDAHERITP----INAIHMAKALEPYQLFFLED---------------P-VAPENTEW 282 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHHHHHHTGGGCCSEEEC---------------S-SCGGGGGG
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HHHHHHHHHhhhcCCCEEEC---------------C-CChhhHHH
Confidence 467788999999998 57888888888864 46889999999999999841 0 12457888
Q ss_pred HHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHHH
Q psy2378 195 VYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 195 i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
.+++++.+ ++||++...+.+++++.++++. +|.|++--+-.+...=..++.+
T Consensus 283 ~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 336 (440)
T 3t6c_A 283 LKMLRQQS-STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAI 336 (440)
T ss_dssp HHHHHHHC-CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred HHHHHhhc-CCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHH
Confidence 89999988 7999999999999999999986 9999886555555544444443
No 216
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.72 E-value=0.00012 Score=75.87 Aligned_cols=143 Identities=13% Similarity=0.144 Sum_probs=98.0
Q ss_pred HHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc------CCC--------CCCcH
Q psy2378 84 IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI------GID--------DINSY 149 (956)
Q Consensus 84 ~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------g~~--------~~~~~ 149 (956)
.+.+.|.|+|+|- ++.--..+.+.++++++|+ .++|+.+=... |.| +....
T Consensus 31 ~~~~~GtDaI~vG--------------gs~gvt~~~~~~~v~~ik~-~~~Piil~p~~~~~~~~gaD~il~pslln~~~~ 95 (235)
T 3w01_A 31 AICMSQTDAIMIG--------------GTDDVTEDNVIHLMSKIRR-YPLPLVLEISNIESVMPGFDFYFVPTVLNSTDV 95 (235)
T ss_dssp HHHTSSCSEEEEC--------------CSSCCCHHHHHHHHHHHTT-SCSCEEEECCCSTTCCTTCSEEEEEEETTBSSG
T ss_pred HHHHcCCCEEEEC--------------CcCCcCHHHHHHHHHHhcC-cCCCEEEecCCHHHhhcCCCEEEEccccCCCCc
Confidence 3568899999993 3443468889999999999 88998764321 111 01110
Q ss_pred HH-HHHHHHHHHHcCC-----CEEE-----Eccccc-------------------------------ccccCCCCCCCCC
Q psy2378 150 DF-VRDFVGTVSSAGC-----RTFI-----VHARNA-------------------------------FLKKLNPKQNRKI 187 (956)
Q Consensus 150 ~~-~~~~a~~l~~~G~-----~~i~-----vh~r~~-------------------------------~~~g~~~~~~~~~ 187 (956)
+. .-.-.+.+.+.|. +.|. +.+.+. .|-..+|.
T Consensus 96 ~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~----- 170 (235)
T 3w01_A 96 AFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGI----- 170 (235)
T ss_dssp GGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTS-----
T ss_pred chhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCC-----
Confidence 00 1112345788888 7766 221110 00001221
Q ss_pred CcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccCCcchHHHHH
Q psy2378 188 PILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 188 ~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+.+.+.++++++..+++||+.-|||.|+++++++.+.||+|.+|.++..||..+.++.+
T Consensus 171 -~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~gAD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 171 -YGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp -CCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHTTSSEEEECTHHHHCHHHHHHTTC
T ss_pred -cCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHcCCCEEEECCceecCHHHHHHHHH
Confidence 23789999999876579999999999999999988779999999999999998887754
No 217
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=97.72 E-value=0.00028 Score=80.30 Aligned_cols=136 Identities=9% Similarity=0.055 Sum_probs=103.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcce---eeeCcccc----cccC---ChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNR---VQNGFFGA----ILMT---KPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~---~~~~~~G~----~l~~---~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
.+|+++++.|+.+.+.||..|-+..+.+-.. ..+.|.|+ .... ..++..+++++||+++ ++++.|...
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4799999999999999999999987322110 00112211 1111 2467789999999998 578888777
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. ++++++++.|++.|+++|..- +.+++..+++++.+ ++||++.+.+.++++++
T Consensus 222 ~~~~~----~~A~~~~~~L~~~~i~~iE~P------------------~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 278 (409)
T 3go2_A 222 FNAKP----EGYLKILRELADFDLFWVEID------------------SYSPQGLAYVRNHS-PHPISSCETLFGIREFK 278 (409)
T ss_dssp TCSCH----HHHHHHHHHTTTSCCSEEECC------------------CSCHHHHHHHHHTC-SSCEEECTTCCHHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCCeEEEeC------------------cCCHHHHHHHHhhC-CCCEEeCCCcCCHHHHH
Confidence 77753 568899999999999999621 24888999999988 79999999999999999
Q ss_pred HHhhh--cCEEEE
Q psy2378 221 LHLNY--IDGVML 231 (956)
Q Consensus 221 ~~l~~--ad~Vmi 231 (956)
++++. ||.|++
T Consensus 279 ~~i~~~~~d~v~~ 291 (409)
T 3go2_A 279 PFFDANAVDVAIV 291 (409)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHHhCCCCEEEe
Confidence 99986 999987
No 218
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.71 E-value=0.00017 Score=77.18 Aligned_cols=162 Identities=14% Similarity=0.136 Sum_probs=97.1
Q ss_pred EEEEecCCC--HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCccccccc----------CChHHHHHHHHHHhhccCc
Q psy2378 66 IAFQVGDNE--PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM----------TKPLLVSDCIKAMRDSVEI 133 (956)
Q Consensus 66 ~~vQl~g~~--~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~----------~~~~~~~eiv~~v~~~~~~ 133 (956)
++.=|...+ .+...+.++.+.++ +|+|||. =|...-..+| --+. -+.+.+.++++++|+.+++
T Consensus 18 li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG--~PfsdP~adG--p~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~ 92 (271)
T 1ujp_A 18 LIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIG--LPYSDPLGDG--PVIQRASELALRKGMSVQGALELVREVRALTEK 92 (271)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEE--CCCCC----C--HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCCCChHHHHHHHHHHHhc-CCEEEEC--CCCCCccccc--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 555555444 46788888888888 9999994 3443211121 1110 2567778999999998899
Q ss_pred cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEc-------------------------ccc------c--------
Q psy2378 134 DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVH-------------------------ARN------A-------- 174 (956)
Q Consensus 134 pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh-------------------------~r~------~-------- 174 (956)
|+.+ + ++.+.-..-....+++.+.++|+|.+.+- .-+ .
T Consensus 93 Pii~-m--~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~g 169 (271)
T 1ujp_A 93 PLFL-M--TYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATG 169 (271)
T ss_dssp CEEE-E--CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCS
T ss_pred CEEE-E--ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCC
Confidence 9877 3 21110000012455666666666655431 000 0
Q ss_pred -----ccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccC
Q psy2378 175 -----FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKN 238 (956)
Q Consensus 175 -----~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~ 238 (956)
...|++|.... .+....++++++++.. ++||++.|||+|++++.++ ..||+|.+|.++...
T Consensus 170 fiy~vs~~G~TG~~~~-~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t~e~a~~~-~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 170 FVYAVSVTGVTGMRER-LPEEVKDLVRRIKART-ALPVAVGFGVSGKATAAQA-AVADGVVVGSALVRA 235 (271)
T ss_dssp CEEEECC-------------CCHHHHHHHHTTC-CSCEEEESCCCSHHHHHHH-TTSSEEEECHHHHHH
T ss_pred CEEEEecCcccCCCCC-CCccHHHHHHHHHhhc-CCCEEEEcCCCCHHHHHHh-cCCCEEEEChHHhcc
Confidence 11123333221 1233468899999886 8999999999999999998 559999999987643
No 219
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=97.69 E-value=0.00029 Score=79.80 Aligned_cols=152 Identities=9% Similarity=-0.021 Sum_probs=113.4
Q ss_pred CCCCEEEEec---CCC--HH----HHHHHHHHHHHcCCCEEEec-CCCCcceeeeCcccccccCChHHHHHHHHHHhhcc
Q psy2378 62 EEHPIAFQVG---DNE--PK----KLAKSAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV 131 (956)
Q Consensus 62 ~~~p~~vQl~---g~~--~~----~~~~aA~~~~~~G~d~IeiN-~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~ 131 (956)
+.-|+-..++ +.+ ++ ++++.|+.+.+.||..|-++ .|-+ ..+++.-.+++++||+++
T Consensus 131 ~~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~ 197 (394)
T 3mqt_A 131 AQLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVI 197 (394)
T ss_dssp SSBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHh
Confidence 3445555665 233 44 67778888888999999984 3311 135788889999999998
Q ss_pred --CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE
Q psy2378 132 --EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 209 (956)
Q Consensus 132 --~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~ 209 (956)
+.++.+....+|.+ .++++++++.|++.|+++|.- ..++.+++..+++++.+ ++||++
T Consensus 198 G~d~~l~vDan~~~~~---~~~A~~~~~~L~~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~ 257 (394)
T 3mqt_A 198 GWDMDMMVDCLYRWTD---WQKARWTFRQLEDIDLYFIEA----------------CLQHDDLIGHQKLAAAI-NTRLCG 257 (394)
T ss_dssp CSSSEEEEECTTCCSC---HHHHHHHHHHTGGGCCSEEES----------------CSCTTCHHHHHHHHHHS-SSEEEE
T ss_pred CCCCeEEEECCCCCCC---HHHHHHHHHHHhhcCCeEEEC----------------CCCcccHHHHHHHHhhC-CCCEEe
Confidence 56888887777721 246889999999999999841 01245899999999998 799999
Q ss_pred ecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 210 NGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 210 nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
.+.+.++++++++++. +|.|++--+-.+...=..++.
T Consensus 258 dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia 296 (394)
T 3mqt_A 258 AEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIM 296 (394)
T ss_dssp CTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHH
Confidence 9999999999999986 999988666555555444444
No 220
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.69 E-value=0.00024 Score=73.85 Aligned_cols=83 Identities=10% Similarity=0.100 Sum_probs=61.5
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~ 234 (956)
++.+.+.|+|+|.+..-.. +.+ ... .++.+|+.++++++.+ ++||++.||| +++++.++++. +|+|++|++
T Consensus 123 ~~~a~~~gaD~i~~~~~f~---~~~-~~g--~~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFE---TDC-KKG--LEGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEEESHH
T ss_pred HHHHHhCCCCEEEECCccc---cCC-CCC--CCCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHH
Confidence 5667789999999865311 000 000 1256899999999887 7999999999 89999999988 999999999
Q ss_pred cccCCcchHHHH
Q psy2378 235 AYKNPFLMSNFD 246 (956)
Q Consensus 235 ~l~~P~l~~~i~ 246 (956)
++.+|+....++
T Consensus 195 i~~~~d~~~~~~ 206 (221)
T 1yad_A 195 IFSSAEPLEAAR 206 (221)
T ss_dssp HHTSSSHHHHHH
T ss_pred hhCCCCHHHHHH
Confidence 998777444433
No 221
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=97.69 E-value=0.00039 Score=78.47 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=109.0
Q ss_pred CCHHHHHHHHHH-HHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKI-IQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~-~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
.+|++.++.+.. ..+.||..+-+..|++. +......|+...+.+++||+++ ++++.+....+|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~--------~~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~---- 212 (388)
T 3tcs_A 145 ITPRDEAERLKRLRDTQGFTAFKVRAGAEV--------GRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTP---- 212 (388)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEEECSCTT--------CTTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCH----
T ss_pred CChHHHHHHHHHHHHhcCCCEEEEccCCCc--------ccccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCH----
Confidence 367666665544 45789999999998763 2233344777889999999998 57888888878864
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++++.|++.|+.+|. +. .++.+++..+++++.+ ++||.+...+.+++++.++++. +|
T Consensus 213 ~~A~~~~~~l~~~~i~~iE---------------eP-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d 275 (388)
T 3tcs_A 213 DRAIEVGHMLQDHGFCHFE---------------EP-CPYWELAQTKQVTDAL-DIDVTGGEQDCDLPTWQRMIDMRAVD 275 (388)
T ss_dssp HHHHHHHHHHHHTTCCEEE---------------CC-SCTTCHHHHHHHHHHC-SSCEEECTTCCCHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHhhcCCeEEE---------------CC-CCccCHHHHHHHHHhc-CCCEEcCCccCCHHHHHHHHHcCCCC
Confidence 4688999999999998883 11 2346899999999988 7999999999999999999986 99
Q ss_pred EEEEccccccCCcchHHHH
Q psy2378 228 GVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 228 ~VmiGR~~l~~P~l~~~i~ 246 (956)
.|++--+-.+...=..++.
T Consensus 276 ~v~~d~~~~GGit~a~kia 294 (388)
T 3tcs_A 276 IVQPDILYLGGICRTLRVV 294 (388)
T ss_dssp EECCCHHHHTSHHHHHHHH
T ss_pred EEEeCccccCCHHHHHHHH
Confidence 9887544444444444443
No 222
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.67 E-value=0.00035 Score=72.98 Aligned_cols=148 Identities=14% Similarity=0.175 Sum_probs=100.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+.|+.+-++.+||+.+.+.+ .++|+|+|-+|.+.+ ++.+.+.++.+++. +..+.+-+.+.
T Consensus 64 ~~~~~v~lmv~d~~~~i~~~---~~agad~v~vH~~~~----------------~~~~~~~~~~i~~~-g~~igv~~~p~ 123 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVEPL---AKAGASGFTFHIEVS----------------RDNWQELIQSIKAK-GMRPGVSLRPG 123 (228)
T ss_dssp CSEEEEEEESSCGGGGHHHH---HHHTCSEEEEEGGGC----------------TTTHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCcEEEEEEecCHHHHHHHH---HHcCCCEEEECCCCc----------------ccHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 46889999999998875555 348999999996432 11224666777654 66666555433
Q ss_pred CCCCCcHHHHHHHHHHHHHc--CCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSA--GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~--G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+. +..+.+.+. ++|+|.+.+... |.++. . -.+..++.++++++..+++||++-|||+. +.+.
T Consensus 124 t~~--------e~~~~~~~~~~~~d~vl~~sv~p---g~~g~--~-~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~ 188 (228)
T 1h1y_A 124 TPV--------EEVFPLVEAENPVELVLVMTVEP---GFGGQ--K-FMPEMMEKVRALRKKYPSLDIEVDGGLGP-STID 188 (228)
T ss_dssp SCG--------GGGHHHHHSSSCCSEEEEESSCT---TCSSC--C-CCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHH
T ss_pred CCH--------HHHHHHHhcCCCCCEEEEEeecC---CCCcc--c-CCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHH
Confidence 221 223445555 899998854432 22221 1 12345677888888765799999999975 8898
Q ss_pred HHhhh-cCEEEEccccccCCcchHHH
Q psy2378 221 LHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 221 ~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
++++. +|++.+|++++..|+.-..+
T Consensus 189 ~~~~aGaD~vvvGsai~~~~d~~~~~ 214 (228)
T 1h1y_A 189 VAASAGANCIVAGSSIFGAAEPGEVI 214 (228)
T ss_dssp HHHHHTCCEEEESHHHHTSSCHHHHH
T ss_pred HHHHcCCCEEEECHHHHCCCCHHHHH
Confidence 88887 99999999999877754433
No 223
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.67 E-value=6.5e-05 Score=85.20 Aligned_cols=128 Identities=8% Similarity=-0.012 Sum_probs=100.1
Q ss_pred CCCH-------HHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccc--cCChHHHHHHHHHHhhcc--CccEEEEec
Q psy2378 72 DNEP-------KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL--MTKPLLVSDCIKAMRDSV--EIDITVKHR 140 (956)
Q Consensus 72 g~~~-------~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l--~~~~~~~~eiv~~v~~~~--~~pv~vKir 140 (956)
+.+| +++++.|+++.++||+.|.++.|-. |+ .+ .++++...+++++||+++ ++++.+-.-
T Consensus 139 ~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~--------~~-~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan 209 (392)
T 3p3b_A 139 DLHLADERAAVALMQEEAMQGYAKGQRHFKIKVGRG--------GR-HMPLWEGTKRDIAIVRGISEVAGPAGKIMIDAN 209 (392)
T ss_dssp TTTCCSHHHHHHHHHHHHHHHHHTTCCCEEEECCHH--------HH-TSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECT
T ss_pred CCCcccccchHHHHHHHHHHHHHhCCCEEEECcCcC--------cc-cCCccccHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 3678 9999999999999999999986521 11 00 236788889999999987 466766555
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh-----CCCceEEEecCCCC
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-----FPELEIIINGGIKT 215 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~-----~~~ipVi~nGgI~s 215 (956)
-+|+ .++++++++.|++.|+++|. +. .+ .+++..+++++. . ++||++.+ +.+
T Consensus 210 ~~~~----~~~ai~~~~~l~~~~i~~iE---------------~P-~~-~d~~~~~~l~~~l~~~g~-~iPIa~dE-~~~ 266 (392)
T 3p3b_A 210 NAYN----LNLTKEVLAALSDVNLYWLE---------------EA-FH-EDEALYEDLKEWLGQRGQ-NVLIADGE-GLA 266 (392)
T ss_dssp TCCC----HHHHHHHHHHTTTSCEEEEE---------------CS-SS-CCHHHHHHHHHHHHHHTC-CCEEEECC-SSC
T ss_pred CCCC----HHHHHHHHHHHHhcCCCEEe---------------cC-Cc-ccHHHHHHHHHhhccCCC-CccEEecC-CCC
Confidence 4554 35688999999999988763 11 12 488889999988 7 79999999 999
Q ss_pred HHHHHHHhhh--cCEEEE
Q psy2378 216 KKEIDLHLNY--IDGVML 231 (956)
Q Consensus 216 ~~da~~~l~~--ad~Vmi 231 (956)
+++++++++. +|.|.+
T Consensus 267 ~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 267 SPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp CTTHHHHHHTTSCCEECC
T ss_pred HHHHHHHHHcCCCCEEEe
Confidence 9999999987 998876
No 224
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.66 E-value=0.00018 Score=95.38 Aligned_cols=209 Identities=11% Similarity=0.054 Sum_probs=132.7
Q ss_pred CCceEEccCc-CcCCHHHHHHHHHcCCCcEEEe-cccccccccCCchhccccCCCCCCEEEEecCCCHHHH---HHHHHH
Q psy2378 10 KRKISIAPMM-NLTDRHCRMFHRQITRYSWLYT-EMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKL---AKSAKI 84 (956)
Q Consensus 10 ~~~i~lAPM~-~~td~~fR~~~~~~g~~~l~~t-em~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~---~~aA~~ 84 (956)
+.||++|||+ ..++..|---+-..||.+.+-. ...+.+.+-..-.+.-..++.+.|+.|.+.-.+|..+ .+..+.
T Consensus 589 ~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~ 668 (2051)
T 2uv8_G 589 RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQWGIPLIKE 668 (2051)
T ss_dssp SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHHHHHHHHHH
T ss_pred ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhhhhHHHHHH
Confidence 4599999999 4458888776677776544422 2233333321112233335567899999876665422 256667
Q ss_pred HHHcCCCE--EEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHc
Q psy2378 85 IQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSA 162 (956)
Q Consensus 85 ~~~~G~d~--IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~ 162 (956)
+.+.|+.. |.+..|-|. ++.+.++++.+ |+++....-. . ...+..+...+++
T Consensus 669 ~~~~gv~i~~v~~~ag~p~---------------~~~~~~~i~~l----G~~vi~~~~~------~-~~a~~~~~~~~~~ 722 (2051)
T 2uv8_G 669 LRSKGYPIQFLTIGAGVPS---------------LEVASEYIETL----GLKYLGLKPG------S-IDAISQVINIAKA 722 (2051)
T ss_dssp HHHTTCSEEEEEEESSCCC---------------HHHHHHHHHHS----CCSCEEECCC------S-HHHHHHHHHHHHH
T ss_pred HHHcCCCcceEEecCCCCc---------------hhhHHHHHHHc----CCEEEEecCc------h-HHHHHHHHHHHHh
Confidence 77888766 888777662 33455555554 7776543221 1 2456778889999
Q ss_pred CCCEE---EEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHh-----------hh-cC
Q psy2378 163 GCRTF---IVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL-----------NY-ID 227 (956)
Q Consensus 163 G~~~i---~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l-----------~~-ad 227 (956)
|+|++ .+.|... .|+.|... ....-+..+.+|++.+ +||||+.|||.|.+++..+| .- ||
T Consensus 723 g~d~~ii~~~~G~ea--GGH~g~~d--~~~~~l~l~~~v~~~~-~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgad 797 (2051)
T 2uv8_G 723 HPNFPIALQWTGGRG--GGHHSFED--AHTPMLQMYSKIRRHP-NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFD 797 (2051)
T ss_dssp STTSCEEEEECCSSC--SEECCSCC--SSHHHHHHHHHHTTCT-TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCS
T ss_pred CCCceeEEEEEccCc--CCCCCccc--ccccHHHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHccccccccCccCCCCc
Confidence 99994 4444431 23322110 0111235578888887 89999999999999999999 34 99
Q ss_pred EEEEccccccCCc--chHHHHHhh
Q psy2378 228 GVMLGREAYKNPF--LMSNFDLNY 249 (956)
Q Consensus 228 ~VmiGR~~l~~P~--l~~~i~~~~ 249 (956)
||.+|.-++.-.. .-..+|+.+
T Consensus 798 Gv~~GTrf~~t~Ea~~~~~~K~~i 821 (2051)
T 2uv8_G 798 GFLFGSRVMIAKEVKTSPDAKKCI 821 (2051)
T ss_dssp CEECSGGGTTSTTSCCCHHHHHHH
T ss_pred eeeechHHHhCcccccCHHHHHHH
Confidence 9999999987665 334455444
No 225
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.61 E-value=0.0001 Score=93.49 Aligned_cols=114 Identities=11% Similarity=0.138 Sum_probs=80.1
Q ss_pred ChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCC-CCCCcCcHH
Q psy2378 116 KPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQN-RKIPILKYN 193 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~-~~~~~~~~~ 193 (956)
+++-+.++++.+|+.. +.||.||+-.+.. ..+.|+.++++|+|+|+|.+..+.. +.++... ...+..-..
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g-------i~~~A~~a~~AGAD~IvVsG~eGGT-gasp~~~~~~~G~Pt~~ 1047 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRSG-------IGTIAAGVAKANADIILISGNSGGT-GASPQTSIKFAGLPWEM 1047 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCTT-------HHHHHHHHHHTTCSEEEEECTTCCC-SSEETTHHHHSCCCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCCC-------hHHHHHHHHHcCCcEEEEcCCCCCC-CCCchhhhcCCchhHHH
Confidence 3566789999999988 8999999876421 3456889999999999997553210 1011000 001111224
Q ss_pred HHHHHHHhC------CCceEEEecCCCCHHHHHHHhhh-cCEEEEcccccc
Q psy2378 194 FVYNLKKDF------PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 237 (956)
Q Consensus 194 ~i~~v~~~~------~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~ 237 (956)
.+.++.+.+ .++|||+.|||.+..|+.+++.. ||+|++||+++.
T Consensus 1048 aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1048 GLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHH
Confidence 455555532 26999999999999999999988 999999999875
No 226
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.61 E-value=0.00042 Score=72.75 Aligned_cols=157 Identities=14% Similarity=0.196 Sum_probs=110.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCC--EEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEec
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYD--EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d--~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir 140 (956)
..+..+|...|...+.+..+.+.++|+| .||+--|.=++|. .+| .++++++|+.+ +.|+.+.+-
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni---t~G----------~~~v~~lr~~~p~~~ldvHLm 94 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL---TFG----------PMVLKALRDYGITAGMDVHLM 94 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB---CCC----------HHHHHHHHHHTCCSCEEEEEE
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch---hcC----------HHHHHHHHHhCCCCeEEEEEe
Confidence 4588999999999999999999999998 4555445434443 233 26788888888 899999887
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc--------------------------------c------------c
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------------------------------F------------L 176 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~--------------------------------~------------~ 176 (956)
.... ..+++.+.++|+|.+++|.-.. + .
T Consensus 95 v~~p--------~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~ 166 (246)
T 3inp_A 95 VKPV--------DALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVN 166 (246)
T ss_dssp CSSC--------HHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSC
T ss_pred eCCH--------HHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeec
Confidence 5311 2467778899999999985210 0 0
Q ss_pred ccCCCCCCCCCCcCcHHHHHHHHHhC----CCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 177 KKLNPKQNRKIPILKYNFVYNLKKDF----PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 177 ~g~~~~~~~~~~~~~~~~i~~v~~~~----~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
.|+.|+ .+. +..++.++++++.. .+++|..-|||+ ++.+.++.+. ||.+.+|+++...++.-..+
T Consensus 167 PGfgGQ--~fi-~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i 236 (246)
T 3inp_A 167 PGFGGQ--KFI-PAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSYKQTI 236 (246)
T ss_dssp TTC--C--CCC-TTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCHHHHH
T ss_pred CCCCCc--ccc-hHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCHHHHH
Confidence 122111 111 34567777777642 258999999997 7889999988 99999999988766654433
No 227
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.60 E-value=0.0028 Score=66.06 Aligned_cols=201 Identities=8% Similarity=0.062 Sum_probs=122.4
Q ss_pred ccccccCCCceEEccCcCcCCH-HHHHHHHHcCCCcEEEecccccccc-cCCchhccccCCCCCCEEEEecC-CCHHHHH
Q psy2378 3 MINSKYNKRKISIAPMMNLTDR-HCRMFHRQITRYSWLYTEMFTTQAI-LGNKKHCLDFNAEEHPIAFQVGD-NEPKKLA 79 (956)
Q Consensus 3 ~~~~~~~~~~i~lAPM~~~td~-~fR~~~~~~g~~~l~~tem~~~~~l-~~~~~~~~~~~~~~~p~~vQl~g-~~~~~~~ 79 (956)
|++..| ..|+++- -..|.+. ..+...++-| ++++-.-+=.. .+ -+....++.+-+ +-++...-.| .+.++..
T Consensus 6 i~~~~~-~srl~~G-tgky~~~~~~~~ai~asg-~eivtva~rR~-~~~~~~~~~~~~~i~-~~~~lpntaG~~taeeAv 80 (268)
T 2htm_A 6 VGPVEL-KSRLILG-SGKYEDFGVMREAIAAAK-AEVVTVSVRRV-ELKAPGHVGLLEALE-GVRLLPNTAGARTAEEAV 80 (268)
T ss_dssp ETTEEE-CCSEEEE-CSSCSCHHHHHHHHHHTT-CSEEEEEEEEC-C-------CHHHHTT-TSEEEEBCTTCCSHHHHH
T ss_pred ECCEEe-ecceEEe-cCCCCCHHHHHHHHHHhC-CCEEEEEcccc-CCCCCCcccHHHHHh-hhhccCcccCCCCHHHHH
Confidence 566788 8888654 3456555 4455556666 55554442121 21 111122333333 5555566655 6899999
Q ss_pred HHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHH
Q psy2378 80 KSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGT 158 (956)
Q Consensus 80 ~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~ 158 (956)
.+|+.+.+. |-+.|-|-. ..+. -.++-|+....+-.+.+.+. |+.|...+. ++ ..++++
T Consensus 81 ~~a~lare~~gt~~iKlEv-------i~d~--~~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~~---~D-------~~~ak~ 140 (268)
T 2htm_A 81 RLARLGRLLTGERWVKLEV-------IPDP--TYLLPDPLETLKAAERLIEE-DFLVLPYMG---PD-------LVLAKR 140 (268)
T ss_dssp HHHHHHHHHHCCSEEBCCC-------CSCT--TTTCCCHHHHHHHHHHHHHT-TCEECCEEC---SC-------HHHHHH
T ss_pred HHHHhhhHhcCcceeeeee-------ccCc--cccCcCHHHHHHHHHHHHHC-CCEEeeccC---CC-------HHHHHH
Confidence 999988874 567765432 1111 12566766655555555433 433321221 11 378999
Q ss_pred HHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCC-ceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 159 VSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 159 l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~-ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
+++.|+++|---+.. -| . ..+..+.+.+..+++..++ +|||+-|||.+++|+.++++- ||+|.+|.+..
T Consensus 141 l~~~G~~aVmPlg~p---IG---s---G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~ 211 (268)
T 2htm_A 141 LAALGTATVMPLAAP---IG---S---GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIA 211 (268)
T ss_dssp HHHHTCSCBEEBSSS---TT---T---CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHH
T ss_pred HHhcCCCEEEecCcc---Cc---C---CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 999999999442221 01 0 1122367778999883347 999999999999999999998 99999999876
Q ss_pred c
Q psy2378 237 K 237 (956)
Q Consensus 237 ~ 237 (956)
.
T Consensus 212 ~ 212 (268)
T 2htm_A 212 E 212 (268)
T ss_dssp T
T ss_pred C
Confidence 5
No 228
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=97.59 E-value=0.00023 Score=81.44 Aligned_cols=164 Identities=10% Similarity=0.011 Sum_probs=115.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceee---eCcccc--------c--------ccCChHHHHH
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ---NGFFGA--------I--------LMTKPLLVSD 122 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~---~~~~G~--------~--------l~~~~~~~~e 122 (956)
+.-|+-....+.+++++.+.++...+.||..|-+..|.|..... ..+.|- . .....++..+
T Consensus 137 ~~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 216 (426)
T 4e4f_A 137 TGVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPK 216 (426)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHH
T ss_pred CceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 34456667788899999998888888999999999987632110 000000 0 0012356789
Q ss_pred HHHHHhhcc--CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHH
Q psy2378 123 CIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK 200 (956)
Q Consensus 123 iv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~ 200 (956)
++++||+++ ++++.+....+|+. ++++++++.|++.|+++|.- ..++.+++..+++++
T Consensus 217 ~v~avR~a~G~d~~L~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~ 276 (426)
T 4e4f_A 217 LFEAVRDKFGFNEHLLHDMHHRLTP----IEAARFGKSVEDYRLFWMED----------------PTPAENQACFRLIRQ 276 (426)
T ss_dssp HHHHHHHHHTTSSEEEEECTTCSCH----HHHHHHHHHTGGGCCSEEEC----------------CSCCSSGGGGHHHHT
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCH----HHHHHHHHHHhhcCCCEEEC----------------CCChHHHHHHHHHHh
Confidence 999999998 57888887777753 56889999999999999841 012457888899999
Q ss_pred hCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcchHHHH
Q psy2378 201 DFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 201 ~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l~~~i~ 246 (956)
.+ ++||++.+.+.++++++++++. ||.|++--+-.+...=..++.
T Consensus 277 ~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia 323 (426)
T 4e4f_A 277 HT-VTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIA 323 (426)
T ss_dssp TC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred cC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHH
Confidence 87 7999999999999999999986 999987555554444444443
No 229
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.58 E-value=0.00036 Score=81.64 Aligned_cols=135 Identities=14% Similarity=0.134 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-C-ccEEEEeccCCCCCCcHHHHHH
Q psy2378 77 KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-E-IDITVKHRIGIDDINSYDFVRD 154 (956)
Q Consensus 77 ~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~-~pv~vKir~g~~~~~~~~~~~~ 154 (956)
...+.++.+.++|++.|.+.... | ++..+.+.++.+++.. + .|+.++--.. .+
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~~~----------g-----~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t----------~~ 296 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDSSD----------G-----FSEWQKITIGWIREKYGDKVKVGAGNIVD----------GE 296 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECCSC----------C-----CSHHHHHHHHHHHHHHGGGSCEEEEEECS----------HH
T ss_pred hHHHHHHHHHhhhccceEEeccc----------C-----cccchhhHHHHHHHhCCCCceEeeccccC----------HH
Confidence 33444666777799988875421 1 2344666778888876 4 7888764431 35
Q ss_pred HHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC--------CceEEEecCCCCHHHHHHHhhh-
Q psy2378 155 FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP--------ELEIIINGGIKTKKEIDLHLNY- 225 (956)
Q Consensus 155 ~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~--------~ipVi~nGgI~s~~da~~~l~~- 225 (956)
-++.+.++|+|++.| +..+.... +.+.....+...+..+.++.+... ++|||+.|||.++.|+.++++.
T Consensus 297 ~a~~l~~aGad~I~V-g~~~g~~~-~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalG 374 (503)
T 1me8_A 297 GFRYLADAGADFIKI-GIGGGSIC-ITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMG 374 (503)
T ss_dssp HHHHHHHHTCSEEEE-CSSCSTTC-CSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHhCCCeEEe-cccCCcCc-ccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcC
Confidence 678899999999998 33210000 011111112235566666654432 4899999999999999999998
Q ss_pred cCEEEEccccccC
Q psy2378 226 IDGVMLGREAYKN 238 (956)
Q Consensus 226 ad~VmiGR~~l~~ 238 (956)
||+||+|+.+++-
T Consensus 375 A~~V~iG~~~~~~ 387 (503)
T 1me8_A 375 ADFIMLGRYFARF 387 (503)
T ss_dssp CSEEEESHHHHTB
T ss_pred CCEEEECchhhcc
Confidence 9999999988653
No 230
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.58 E-value=0.00019 Score=74.58 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=74.5
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++++.+...|+..+.+++.+. .| . .. ...++.++++++.. ++|||++|++.+++++.++++. ||+|+
T Consensus 132 ~~~~i~~~~~~~~~~vli~~~~~--~g---~---~~-g~~~~~i~~~~~~~-~~Pvia~~g~~~~~~~~~~~~~G~~~~~ 201 (237)
T 3cwo_X 132 LRDWVVEVEKRGAGEILLTSIDR--DG---T---KS-GYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAAL 201 (237)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTT--TT---C---CS-CCCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhhcCCCeEEEEecCC--CC---c---cc-cccHHHHHHHHHhc-CCCEEecCCCCCHHHHHHHHHcCcHHHh
Confidence 56888899999999888876421 01 0 11 23588999999887 8999999999999999999988 99999
Q ss_pred EccccccCCcchHHHHHhhccC
Q psy2378 231 LGREAYKNPFLMSNFDLNYYSN 252 (956)
Q Consensus 231 iGR~~l~~P~l~~~i~~~~~~~ 252 (956)
+|++++.+||-+.++++.+...
T Consensus 202 vg~a~~~~~~~~~~~~~~l~~~ 223 (237)
T 3cwo_X 202 AASVFHFREIDVRELKEYLKKH 223 (237)
T ss_dssp ESHHHHTTSSCHHHHHHHHHTT
T ss_pred hhHHHHcCCCCHHHHHHHHHHC
Confidence 9999999999999998876543
No 231
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.56 E-value=0.00033 Score=72.46 Aligned_cols=136 Identities=20% Similarity=0.170 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccCCC-CCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGID-DINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~~-~~~~~~~ 151 (956)
..+.-+.-++.+.+.|+|.||+.. .+|.....+.+.+.+=+++|++.++ .|+-|=+-.+.- +..+.++
T Consensus 78 ~~~~K~~E~~~Ai~~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~ee 147 (231)
T 3ndo_A 78 VPGIKATEAELAVAAGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPL 147 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHH
Confidence 445555566778888999999854 3566566788999999999999985 444222333321 1112356
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
....++...++|+|+|-.+.+. ++ .+.+..+.++-+++.+ ++++|-++|||.|.+++.++++. |+-+
T Consensus 148 i~~a~~ia~~aGADfVKTSTGf------~~-----~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 148 LADVCRVARDAGADFVKTSTGF------HP-----SGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRL 216 (231)
T ss_dssp HHHHHHHHHHTTCSEEECCCSC------CT-----TCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHCcCEEEcCCCC------CC-----CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhc
Confidence 7788899999999999765432 10 1235556666665544 36999999999999999999988 9944
Q ss_pred E
Q psy2378 230 M 230 (956)
Q Consensus 230 m 230 (956)
.
T Consensus 217 G 217 (231)
T 3ndo_A 217 G 217 (231)
T ss_dssp E
T ss_pred c
Confidence 3
No 232
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=97.56 E-value=0.00038 Score=78.87 Aligned_cols=137 Identities=7% Similarity=-0.052 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHcCCCEEEec-CCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHHHH
Q psy2378 77 KLAKSAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFVR 153 (956)
Q Consensus 77 ~~~~aA~~~~~~G~d~IeiN-~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~~~ 153 (956)
++++.|+.+.+.||..+-++ .|.+ ..+++.-.+++++||+++ +.++.+....+|. +.++++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~---~~~~A~ 223 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFT---DWYEVA 223 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCC---CHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCC---CHHHHH
Confidence 67778888888999999984 3321 135778889999999998 5678887776772 134688
Q ss_pred HHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEE
Q psy2378 154 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVML 231 (956)
Q Consensus 154 ~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~Vmi 231 (956)
++++.|++.|+++|.- ..++.+++..+++++.+ ++||++.+.+.++++++++++. ||.|++
T Consensus 224 ~~~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 286 (394)
T 3mkc_A 224 RLLNSIEDLELYFAEA----------------TLQHDDLSGHAKLVENT-RSRICGAEMSTTRFEAEEWITKGKVHLLQS 286 (394)
T ss_dssp HHHHHTGGGCCSEEES----------------CSCTTCHHHHHHHHHHC-SSCBEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHhhhcCCeEEEC----------------CCCchhHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCeEec
Confidence 9999999999999841 01245899999999998 7999999999999999999986 999987
Q ss_pred ccccccCCcchHHHH
Q psy2378 232 GREAYKNPFLMSNFD 246 (956)
Q Consensus 232 GR~~l~~P~l~~~i~ 246 (956)
--+-.+...=..++.
T Consensus 287 k~~~~GGit~~~~ia 301 (394)
T 3mkc_A 287 DYNRCGGLTELRRIT 301 (394)
T ss_dssp CTTTTTHHHHHHHHH
T ss_pred CccccCCHHHHHHHH
Confidence 555555444444443
No 233
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=97.56 E-value=0.00029 Score=79.94 Aligned_cols=136 Identities=10% Similarity=0.069 Sum_probs=104.9
Q ss_pred CCCEEEEec-CCC--HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEE
Q psy2378 63 EHPIAFQVG-DNE--PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITV 137 (956)
Q Consensus 63 ~~p~~vQl~-g~~--~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~v 137 (956)
.-|+-..+. +.+ |+++++.|+.+.+.||..|.++.+ | +.-.+.+++||+++ ++++.|
T Consensus 149 ~v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~-----------------~~d~~~v~avR~a~G~~~~L~v 210 (400)
T 3mwc_A 149 YIESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P-----------------GWDVEPLQETRRAVGDHFPLWT 210 (400)
T ss_dssp EEEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T-----------------TBSHHHHHHHHHHHCTTSCEEE
T ss_pred eEEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c-----------------chHHHHHHHHHHhcCCCCEEEE
Confidence 334555554 346 999999999998899999999873 1 11256788888887 578888
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH
Q psy2378 138 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 217 (956)
Q Consensus 138 Kir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~ 217 (956)
....+|+.. + .++++.|++.|+++|. + ..++.+++..+++++.+ ++||++...+.+++
T Consensus 211 DaN~~w~~~----~-~~~~~~l~~~~i~~iE---------------q-P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 268 (400)
T 3mwc_A 211 DANSSFELD----Q-WETFKAMDAAKCLFHE---------------Q-PLHYEALLDLKELGERI-ETPICLDESLISSR 268 (400)
T ss_dssp ECTTCCCGG----G-HHHHHHHGGGCCSCEE---------------S-CSCTTCHHHHHHHHHHS-SSCEEESTTCCSHH
T ss_pred eCCCCCCHH----H-HHHHHHHHhcCCCEEe---------------C-CCChhhHHHHHHHHhhC-CCCEEEeCCcCCHH
Confidence 888888753 3 5889999999999883 1 12345899999999988 79999999999999
Q ss_pred HHHHHhhh--cCEEEEccccccC
Q psy2378 218 EIDLHLNY--IDGVMLGREAYKN 238 (956)
Q Consensus 218 da~~~l~~--ad~VmiGR~~l~~ 238 (956)
++.++++. +|.|++--+-.+.
T Consensus 269 ~~~~~~~~~~~d~v~~k~~~~GG 291 (400)
T 3mwc_A 269 VAEFVAKLGISNIWNIKIQRVGG 291 (400)
T ss_dssp HHHHHHHTTCCSEEEECHHHHTS
T ss_pred HHHHHHhcCCCCEEEEcchhhCC
Confidence 99999986 9999884443333
No 234
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=97.55 E-value=0.00045 Score=78.07 Aligned_cols=132 Identities=8% Similarity=0.103 Sum_probs=106.6
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC---ccEEEEec
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE---IDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~---~pv~vKir 140 (956)
-|+-..+...+|+++++.|+.+.+.||..|-+..|++ +++.-.+.+++||++++ +++.|...
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDaN 218 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDGN 218 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEECT
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeCC
Confidence 3455677788999999999999899999999998863 36666788999988764 56777777
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. +++.++++.|++.++ +|. +. ..+|+..+++++.. ++||.+...+.++.++.
T Consensus 219 ~~w~~----~~A~~~~~~L~~~~i-~iE---------------eP---~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 274 (391)
T 4e8g_A 219 RSLPS----RDALRLSRECPEIPF-VLE---------------QP---CNTLEEIAAIRGRV-QHGIYLDESGEDLSTVI 274 (391)
T ss_dssp TCCCH----HHHHHHHHHCTTSCE-EEE---------------SC---SSSHHHHHHHGGGC-CSCEEESTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCe-EEe---------------cC---CccHHHHHHHHhhC-CCCEEeCCCCCCHHHHH
Confidence 77763 468899999999888 761 11 24899999999988 79999999999999999
Q ss_pred HHhhh--cCEEEEccc
Q psy2378 221 LHLNY--IDGVMLGRE 234 (956)
Q Consensus 221 ~~l~~--ad~VmiGR~ 234 (956)
++++. +|.|++--+
T Consensus 275 ~~~~~~a~d~v~ik~~ 290 (391)
T 4e8g_A 275 RAAGQGLCDGFGMKLT 290 (391)
T ss_dssp HHHHTTCCSEEEEEHH
T ss_pred HHHHcCCCCEEEeCcc
Confidence 99986 999988443
No 235
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.53 E-value=0.0003 Score=79.73 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=78.4
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 195 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i 195 (956)
+++.+.++++.+++. +.|+.++++.. . ..+.++.++++|+|++.+|++.. .+++.+ +...|..+
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~----~----~~e~a~~~~~agad~i~i~~~~~-~~~~~~------~~~~~~~i 203 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ----N----VREIAPIVIKAGADLLVIQGTLI-SAEHVN------TGGEALNL 203 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT----T----HHHHHHHHHHTTCSEEEEECSSC-CSSCCC------C-----CH
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc----c----HHHHHHHHHHCCCCEEEEeCCcc-ccccCC------CcccHHHH
Confidence 789999999999986 89999988752 1 35678888899999999997641 122111 11377778
Q ss_pred HHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcccc
Q psy2378 196 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREA 235 (956)
Q Consensus 196 ~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~ 235 (956)
.++++.+ ++||++ |+|.|+++++.+++. ||+|++|+|.
T Consensus 204 ~~l~~~~-~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 204 KEFIGSL-DVPVIA-GGVNDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHC-SSCEEE-ECCCSHHHHHHHHTTTCSEEEESCCS
T ss_pred HHHHHhc-CCCEEE-CCcCCHHHHHHHHHcCCCEEEECCCc
Confidence 8999987 799998 999999999999988 9999999875
No 236
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.52 E-value=0.0015 Score=68.37 Aligned_cols=132 Identities=18% Similarity=0.080 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccCCCCCCcHHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~~~~~~~~~~ 152 (956)
..+.-+.-++.+.+.|+|.||+-. .+|.....+.+.+.+=+++|+++++ .|+-|=+-.+.- +.++.
T Consensus 109 ~~~~Kv~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---t~eei 175 (260)
T 3r12_A 109 ETRTKAHEAIFAVESGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL---DTEEK 175 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---CHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC---CHHHH
Confidence 445555566777788999999853 3566556788999999999998885 444333444422 23467
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
...++...++|+|+|-.+.+. ++ +.+..+.++-+++.+ ++++|-++|||.|.+++.++++. |+-+.
T Consensus 176 ~~A~~ia~eaGADfVKTSTGf------~~------~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 176 IAACVISKLAGAHFVKTSTGF------GT------GGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIG 243 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCSS------SS------CCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCcCEEEcCCCC------CC------CCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceee
Confidence 788899999999999776332 11 135556566665544 36999999999999999999998 99443
No 237
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.50 E-value=0.00031 Score=73.02 Aligned_cols=146 Identities=14% Similarity=0.112 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc------CCC--------
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI------GID-------- 144 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~------g~~-------- 144 (956)
.++++.+.++|+|.|||-.+ .--+.+.+.++++++|+ .++|+.+=... |.|
T Consensus 23 ~~~~~~l~~~GaD~IelG~S--------------~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i~~gvDg~iipdLp 87 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISGT--------------QNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNVVYDVDYLFVPTVL 87 (234)
T ss_dssp HHHHHHHHTTTCSEEEECCC--------------TTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCCCCCSSEEEEEEET
T ss_pred HHHHHHHHHcCCCEEEECCC--------------CCCCHHHHHHHHHHhcC-CCCCEEEecCCcchhhcCCCEEEEcccC
Confidence 44567778899999999651 22357889999999998 78887653222 111
Q ss_pred CCCcHHHHH-----HHHHHH----HHcC-----CCEEEE----c-ccc--c-cc---------------------c--cC
Q psy2378 145 DINSYDFVR-----DFVGTV----SSAG-----CRTFIV----H-ARN--A-FL---------------------K--KL 179 (956)
Q Consensus 145 ~~~~~~~~~-----~~a~~l----~~~G-----~~~i~v----h-~r~--~-~~---------------------~--g~ 179 (956)
.++. .+.. +.++.+ ++.| .+.|.. - +.+ . .. - ++
T Consensus 88 ~ee~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~ 166 (234)
T 2f6u_A 88 NSAD-GDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPI 166 (234)
T ss_dssp TBSB-GGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSE
T ss_pred CCCC-HHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCE
Confidence 0111 1122 444322 7778 777772 1 111 0 00 0 10
Q ss_pred CCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccccCCcc
Q psy2378 180 NPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFL 241 (956)
Q Consensus 180 ~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l~~P~l 241 (956)
.-... .-.+.+.+.++++++.+.++||+.-|||.|+++++++++.||+|.+|.++..+|.-
T Consensus 167 Vyl~~-~G~~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~gAd~VIVGSa~v~~~~~ 227 (234)
T 2f6u_A 167 IYIEY-SGTYGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLRYADTIIVGNVIYEKGID 227 (234)
T ss_dssp EEEEC-TTSCCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHHHSSEEEECHHHHHHCHH
T ss_pred EEEeC-CCCcchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhCCCEEEEChHHHhCHHH
Confidence 00000 00135789999999986469999999999999999988789999999999998853
No 238
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.47 E-value=0.00011 Score=77.14 Aligned_cols=168 Identities=11% Similarity=0.075 Sum_probs=100.5
Q ss_pred CCCEEEEecC--CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCc------cccccc--CChHHHHHHHHHHhhccC
Q psy2378 63 EHPIAFQVGD--NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGF------FGAILM--TKPLLVSDCIKAMRDSVE 132 (956)
Q Consensus 63 ~~p~~vQl~g--~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~------~G~~l~--~~~~~~~eiv~~v~~~~~ 132 (956)
+.-++.=|.. .+++...+.++.+.++|+|.|||.+ |.+.-..|| .--+|. -+.+.+.++++++|+.
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGi--PfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-- 88 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGV--AYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-- 88 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEEC--CCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--
Confidence 3345555544 4568899999999999999999964 433323332 111222 2568888999999875
Q ss_pred ccEEEEe------ccCCC----------------CCCcHHHHHHHHHHHHHcCCCEEEEc-cccc---------ccc---
Q psy2378 133 IDITVKH------RIGID----------------DINSYDFVRDFVGTVSSAGCRTFIVH-ARNA---------FLK--- 177 (956)
Q Consensus 133 ~pv~vKi------r~g~~----------------~~~~~~~~~~~a~~l~~~G~~~i~vh-~r~~---------~~~--- 177 (956)
+|+.+=. +.|.+ .+.+.++..++.+.+.+.|++.|.+- ..+. ...
T Consensus 89 ~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFi 168 (252)
T 3tha_A 89 KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFI 168 (252)
T ss_dssp SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCE
T ss_pred CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeE
Confidence 6775532 11211 01122334445555555555554432 1110 011
Q ss_pred ------cCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCEEEEccccc
Q psy2378 178 ------KLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAY 236 (956)
Q Consensus 178 ------g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~VmiGR~~l 236 (956)
|.+|.... ....-.+.++++|+.. ++||+..+||.++++++++.+.||||.+|.+++
T Consensus 169 Y~Vs~~GvTG~~~~-~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~~ADGVIVGSAiV 231 (252)
T 3tha_A 169 YLLASIGITGTKSV-EEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRKVADGVIVGTSIV 231 (252)
T ss_dssp EEECCSCSSSCSHH-HHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTTTSSEEEECHHHH
T ss_pred EEEecCCCCCcccC-CCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHhcCCEEEECHHHH
Confidence 22222100 0001135788888876 799999999999999998876699999999865
No 239
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=97.47 E-value=0.0011 Score=74.86 Aligned_cols=133 Identities=11% Similarity=0.070 Sum_probs=102.1
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEec
Q psy2378 64 HPIAFQVGDNEPKKLAKSAK-IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~-~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir 140 (956)
-|+-..+...++++..+.++ .+++.||..+-+..|+. +++.-.+.+++||++++ +++.+...
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 34444565567776555444 44547999999987642 35666788999999884 67888877
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. +++.++++.|++.|+.+|. +. .++.+|+..+++++.. ++||++...+.+++++.
T Consensus 203 ~~~~~----~~A~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 261 (382)
T 3dgb_A 203 QAWDE----AVALRACRILGGNGIDLIE---------------QP-ISRNNRAGMVRLNASS-PAPIMADESIECVEDAF 261 (382)
T ss_dssp TCBCH----HHHHHHHHHHHTTTCCCEE---------------CC-BCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCcCeee---------------CC-CCccCHHHHHHHHHhC-CCCEEeCCCcCCHHHHH
Confidence 77864 4688999999999988883 11 2346899999999988 79999999999999999
Q ss_pred HHhhh--cCEEEEc
Q psy2378 221 LHLNY--IDGVMLG 232 (956)
Q Consensus 221 ~~l~~--ad~VmiG 232 (956)
++++. +|.|++-
T Consensus 262 ~~~~~~~~d~v~~k 275 (382)
T 3dgb_A 262 NLAREGAASVFALK 275 (382)
T ss_dssp HHHHHTCCSEEEEC
T ss_pred HHHHcCCCCEEEec
Confidence 99986 9999873
No 240
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.45 E-value=0.0011 Score=68.34 Aligned_cols=136 Identities=16% Similarity=0.119 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE--eccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK--HRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK--ir~g~~~~~~~~~ 151 (956)
..+.-+.-++.+.+.|+|.||+.. .+|.....+.+.+.+=+.+|++.++-+ .+| +-.+.- +.++
T Consensus 69 ~~~~k~~e~~~Ai~~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l---~~e~ 134 (220)
T 1ub3_A 69 EKEVKALEAALACARGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYF---SPEE 134 (220)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGS---CHHH
T ss_pred chHHHHHHHHHHHHcCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCC---CHHH
Confidence 345556666778889999999964 355544567888888889999888543 455 333332 2346
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cC--
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-ID-- 227 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad-- 227 (956)
....++...++|+|+|-.+.+. + .+.+..+.++.+++.+ +.+||-++|||.|.+++.++++. |+
T Consensus 135 i~~a~~ia~eaGADfVKTsTGf------~------~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~Ri 202 (220)
T 1ub3_A 135 IARLAEAAIRGGADFLKTSTGF------G------PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRL 202 (220)
T ss_dssp HHHHHHHHHHHTCSEEECCCSS------S------SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCEEEeCCCC------C------CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCccc
Confidence 7788999999999999765332 1 1235555555555532 26999999999999999999988 99
Q ss_pred EEEEcccc
Q psy2378 228 GVMLGREA 235 (956)
Q Consensus 228 ~VmiGR~~ 235 (956)
|+..||.+
T Consensus 203 G~S~g~~I 210 (220)
T 1ub3_A 203 GTSSGVAL 210 (220)
T ss_dssp EETTHHHH
T ss_pred chhHHHHH
Confidence 66555543
No 241
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.41 E-value=0.0016 Score=68.44 Aligned_cols=145 Identities=17% Similarity=0.180 Sum_probs=110.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+-|++-|=|.-++-+..+ +..+|+|+|=|++.+ .+.+.+.++++..++ .|..+.|-+..
T Consensus 101 ~lPvLrKDfi~~~~qi~e----a~~~GAD~ilLi~a~---------------l~~~~l~~l~~~a~~-lGl~~lvEv~~- 159 (251)
T 1i4n_A 101 CRPILAKDFYIDTVQVKL----ASSVGADAILIIARI---------------LTAEQIKEIYEAAEE-LGMDSLVEVHS- 159 (251)
T ss_dssp CSCEEEECCCCSTHHHHH----HHHTTCSEEEEEGGG---------------SCHHHHHHHHHHHHT-TTCEEEEEECS-
T ss_pred CCCEEEeeCCCCHHHHHH----HHHcCCCEEEEeccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeCC-
Confidence 568888888877765444 567899999998753 134678888888876 48777776542
Q ss_pred CCCCCcHHHHHHHHHHHHHc-CCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSA-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEID 220 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~-G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~ 220 (956)
..+ ++++.+. |++.|-++.|. +.++ ..|++...++.+.+| ++++|+-|||.|++|+.
T Consensus 160 ---------~eE-~~~A~~l~g~~iIGinnr~--l~t~---------~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~ 218 (251)
T 1i4n_A 160 ---------RED-LEKVFSVIRPKIIGINTRD--LDTF---------EIKKNVLWELLPLVPDDTVVVAESGIKDPRELK 218 (251)
T ss_dssp ---------HHH-HHHHHTTCCCSEEEEECBC--TTTC---------CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHH
T ss_pred ---------HHH-HHHHHhcCCCCEEEEeCcc--cccC---------CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHH
Confidence 123 4566778 99999999986 2222 257778888887775 48999999999999999
Q ss_pred HHhhhcCEEEEccccccCCcchHHHHHhh
Q psy2378 221 LHLNYIDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 221 ~~l~~ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
++.+.+|+|.+|.+++..++.-..+++..
T Consensus 219 ~~~~~a~avLVG~aimr~~d~~~~~~~l~ 247 (251)
T 1i4n_A 219 DLRGKVNAVLVGTSIMKAENPRRFLEEMR 247 (251)
T ss_dssp HHTTTCSEEEECHHHHHCSSHHHHHHHHH
T ss_pred HHHHhCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 99877999999999999998877776643
No 242
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.40 E-value=0.00032 Score=96.41 Aligned_cols=195 Identities=17% Similarity=0.155 Sum_probs=126.9
Q ss_pred CCceEEccCcC-cCCHHHHHHHHHcCCCcEE-EecccccccccCCchhccccCCCCCCEEEEecCCCHHHH------HHH
Q psy2378 10 KRKISIAPMMN-LTDRHCRMFHRQITRYSWL-YTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKL------AKS 81 (956)
Q Consensus 10 ~~~i~lAPM~~-~td~~fR~~~~~~g~~~l~-~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~~~~~~------~~a 81 (956)
+.||+.|||++ .++..+---.-..|+.+.+ -..|.+.+.+...-.++-...+.+.|+.|.+.-.+|..+ .+.
T Consensus 427 ~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~ 506 (3089)
T 3zen_D 427 RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRL 506 (3089)
T ss_dssp SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhhcChhhhhhccCHHHH
Confidence 45899999995 4577776656677765444 112233333321111122233457889999988787542 255
Q ss_pred HHHHHHcC--CCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEE-EeccCCCCCCcHHHHHHHHHH
Q psy2378 82 AKIIQKWG--YDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITV-KHRIGIDDINSYDFVRDFVGT 158 (956)
Q Consensus 82 A~~~~~~G--~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v-Kir~g~~~~~~~~~~~~~a~~ 158 (956)
.+.+.++| +|+|=+.+|.| .++...++++.+++. ++.+.. +... .+-+++
T Consensus 507 ~~~~~~~g~~vdgv~~~aG~P---------------~~ee~~~~i~~l~~~-Gi~~i~~~~~t-----------~~~a~~ 559 (3089)
T 3zen_D 507 VQRARQSGAPIDGLVVSAGIP---------------DLEEAVDIIDELNEV-GISHVVFKPGT-----------VEQIRS 559 (3089)
T ss_dssp HHHHHHTTCSCCEEEEESSCC---------------CHHHHHHHHTSTTHH-HHCSEEECCCS-----------HHHHHH
T ss_pred HHHHHHcCCCceEEEEeCCCC---------------chhHhHHHHHHHHHc-CCEEEEEeCCC-----------HHHHHH
Confidence 66777889 88999988887 235566777777764 554433 3221 345667
Q ss_pred HHHcCCC------EEEEcccccccccCCCCCCCCCCcCcHHHH----HHHHHhCCCceEEEecCCCCHHHHHHHh-----
Q psy2378 159 VSSAGCR------TFIVHARNAFLKKLNPKQNRKIPILKYNFV----YNLKKDFPELEIIINGGIKTKKEIDLHL----- 223 (956)
Q Consensus 159 l~~~G~~------~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i----~~v~~~~~~ipVi~nGgI~s~~da~~~l----- 223 (956)
+++.|++ +|.+.|.++ .|+.+.. .-...+ .++++.. +||||+.|||.|++++..++
T Consensus 560 ~~~i~~d~~~~~y~vv~~G~ea--GGH~g~~------~~~~ll~~~~~~ir~~~-~iPViaaGGI~d~~~vaaal~g~ws 630 (3089)
T 3zen_D 560 VIRIAAEVPTKPVIVHIEGGRA--GGHHSWE------DLDDLLLATYSELRSRS-NITICVGGGIGTPERSAEYLSGRWA 630 (3089)
T ss_dssp HHHHHTTSTTSCEEEEECCSSS--SEECCSC------CHHHHHHHHHHHHTTCT-TEEEEEESSCCCTTTTHHHHHTGGG
T ss_pred HHHhhhhcCCCcEEEEEeCCCc--CCCCCcc------cHHHHHHHHHHHHhhcC-CCeEEEEeCCCCHHHHHHHhccccc
Confidence 7777777 888877653 2222211 122444 6777666 89999999999999999999
Q ss_pred ------hh-cCEEEEccccccCCc
Q psy2378 224 ------NY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 224 ------~~-ad~VmiGR~~l~~P~ 240 (956)
.. ||||++|..++.-+.
T Consensus 631 ~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 631 EVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp GTTTCCCCCCSEEECSSTTTTCTT
T ss_pred cccCccCCCCCEEEecHHHHhCcc
Confidence 55 999999999987654
No 243
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.40 E-value=0.0013 Score=67.63 Aligned_cols=83 Identities=11% Similarity=0.141 Sum_probs=61.9
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~ 234 (956)
+..+.+.|+|+|.+++... +.+ ... ..+.+|+.++++++.. ++||++.|||+ ++++.++++. +|+|++|++
T Consensus 121 ~~~~~~~g~d~i~~~~~~~---~~~-~~~--~~~~~~~~l~~l~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 121 ALEAEKKGADYLGAGSVFP---TKT-KED--ARVIGLEGLRKIVESV-KIPVVAIGGIN-KDNAREVLKTGVDGIAVISA 192 (215)
T ss_dssp HHHHHHHTCSEEEEECSSC---C-----C--CCCCHHHHHHHHHHHC-SSCEEEESSCC-TTTHHHHHTTTCSEEEESHH
T ss_pred HHHHHhcCCCEEEEcCCcc---CCC-CCC--CCCcCHHHHHHHHHhC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHH
Confidence 3456788999999865321 000 011 2346899999999887 79999999998 9999998887 999999999
Q ss_pred cccCCcchHHHH
Q psy2378 235 AYKNPFLMSNFD 246 (956)
Q Consensus 235 ~l~~P~l~~~i~ 246 (956)
++..|+....++
T Consensus 193 i~~~~d~~~~~~ 204 (215)
T 1xi3_A 193 VMGAEDVRKATE 204 (215)
T ss_dssp HHTSSSHHHHHH
T ss_pred HhCCCCHHHHHH
Confidence 998776544443
No 244
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.40 E-value=0.0015 Score=70.40 Aligned_cols=169 Identities=12% Similarity=0.122 Sum_probs=96.2
Q ss_pred CCCEEEEecCCCH-------HHHHHHHHHHHHcCCCEEEec--CCCCcceeeeCcccccccCChHHHHHHHHHHhhccCc
Q psy2378 63 EHPIAFQVGDNEP-------KKLAKSAKIIQKWGYDEINLN--CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI 133 (956)
Q Consensus 63 ~~p~~vQl~g~~~-------~~~~~aA~~~~~~G~d~IeiN--~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~ 133 (956)
+.|+++.+.++++ +.+...++.+.+.|+|+|.++ .|.+ .+. ...+.+.+++++..+ .++
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~-------~~~----~~l~~i~~v~~~a~~-~Gl 172 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSE-------YEH----QSIKNIIQLVDAGMK-VGM 172 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTST-------THH----HHHHHHHHHHHHHHT-TTC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCC-------cHH----HHHHHHHHHHHHHHH-cCC
Confidence 6689998876541 122234555668899999984 3311 000 011222334444332 378
Q ss_pred cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCC
Q psy2378 134 DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 213 (956)
Q Consensus 134 pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI 213 (956)
|+.+=...|.....+.+.....++...++|+|+|-+.- ++ .. .+++.+.. .+||++.||+
T Consensus 173 pvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~--------t~--------e~---~~~vv~~~-~vPVv~~GG~ 232 (295)
T 3glc_A 173 PTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY--------VE--------KG---FERIVAGC-PVPIVIAGGK 232 (295)
T ss_dssp CEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEEC--------CT--------TT---HHHHHHTC-SSCEEEECCS
T ss_pred EEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCC--------CH--------HH---HHHHHHhC-CCcEEEEECC
Confidence 88774322221111222244578889999999987641 11 12 46677666 6999999999
Q ss_pred C-CHHHHHH----Hhhh-cCEEEEccccccCCcch---HHHHHhhccCCCCCCCCCHHHHHHHHH
Q psy2378 214 K-TKKEIDL----HLNY-IDGVMLGREAYKNPFLM---SNFDLNYYSNLPQYKIPTRIDIINLDS 269 (956)
Q Consensus 214 ~-s~~da~~----~l~~-ad~VmiGR~~l~~P~l~---~~i~~~~~~~~~~~~~~~~~e~~~~~~ 269 (956)
. +.+++.+ +++. |+||.+||.++..|+-. +.+.+.++. ..+.+|-++.|.
T Consensus 233 ~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh~------~~s~~eA~~~~~ 291 (295)
T 3glc_A 233 KLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHH------NETADRAYELYL 291 (295)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH------CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHhC------CCCHHHHHHHHH
Confidence 8 4544444 4455 99999999999766532 223332232 234566666554
No 245
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.39 E-value=0.0015 Score=68.19 Aligned_cols=149 Identities=12% Similarity=0.110 Sum_probs=102.7
Q ss_pred EEEEecCCCHHHHHHHHHHHHHcCCCE--EEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCC
Q psy2378 66 IAFQVGDNEPKKLAKSAKIIQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 143 (956)
Q Consensus 66 ~~vQl~g~~~~~~~~aA~~~~~~G~d~--IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 143 (956)
+..+|...|...+.++.+.+ ++|+|. ||+--|.=++|. .+| ..+++++|+.++.|+.+-+-..
T Consensus 3 i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~---t~G----------~~~v~~lr~~~~~~~dvhLmv~- 67 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNL---TLS----------PFFVSQVKKLATKPLDCHLMVT- 67 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCC---CBC----------HHHHHHHHTTCCSCEEEEEESS-
T ss_pred EEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccc---hhc----------HHHHHHHHhccCCcEEEEEEec-
Confidence 56788999999999999999 999997 566555533332 233 2478888888888887776553
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEcccc-c--------------------------------------------cccc
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFIVHARN-A--------------------------------------------FLKK 178 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~-~--------------------------------------------~~~g 178 (956)
+ . ..+++.+.++|+|.+++|.-. . ...|
T Consensus 68 d-p------~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pG 140 (231)
T 3ctl_A 68 R-P------QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPG 140 (231)
T ss_dssp C-G------GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTT
T ss_pred C-H------HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccC
Confidence 1 1 134577788899999888533 1 0001
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHhCC----CceEEEecCCCCHHHHHHHhhh-cCEEEEc-cccccCCc
Q psy2378 179 LNPKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLG-REAYKNPF 240 (956)
Q Consensus 179 ~~~~~~~~~~~~~~~~i~~v~~~~~----~ipVi~nGgI~s~~da~~~l~~-ad~VmiG-R~~l~~P~ 240 (956)
+.|+ .+ .+..++.++++++... +++|..-|||+ ++.+.++.+. ||.+.+| ++++..++
T Consensus 141 fggQ--~f-~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 141 FAGQ--PF-IPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp CSSC--CC-CTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGGCS
T ss_pred cCCc--cc-cHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCCCC
Confidence 1111 11 2334566777766532 58999999996 7888888888 9999999 99988665
No 246
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.38 E-value=0.0012 Score=69.90 Aligned_cols=142 Identities=15% Similarity=0.191 Sum_probs=99.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+-|+..+=|=.++.+.. .+..+|+|+|=|.. +.+. +.+.++++..++ .+..+.|-+..
T Consensus 106 ~lPvl~kdfI~d~~qi~----~a~~~GAD~VlL~~--------------~~l~--~~l~~l~~~a~~-lGl~~lvev~~- 163 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLE----EARAFGASAALLIV--------------ALLG--ELTGAYLEEARR-LGLEALVEVHT- 163 (254)
T ss_dssp CSCEEEESCCCSHHHHH----HHHHTTCSEEEEEH--------------HHHG--GGHHHHHHHHHH-HTCEEEEEECS-
T ss_pred CCCEEECCcCCCHHHHH----HHHHcCCCEEEECc--------------cchH--HHHHHHHHHHHH-CCCeEEEEECC-
Confidence 56776666667776543 35568999998853 2232 567777776654 35444333221
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC----CceEEEecCCCCHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKE 218 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~----~ipVi~nGgI~s~~d 218 (956)
| .+ +..+.+.|++.|-++.|.. .. ...+++...++++.+| ++|+|+.|||.|++|
T Consensus 164 ~---------~E-~~~a~~~gad~IGvn~~~l--~~---------~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~d 222 (254)
T 1vc4_A 164 E---------RE-LEIALEAGAEVLGINNRDL--AT---------LHINLETAPRLGRLARKRGFGGVLVAESGYSRKEE 222 (254)
T ss_dssp H---------HH-HHHHHHHTCSEEEEESBCT--TT---------CCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHH
T ss_pred H---------HH-HHHHHHcCCCEEEEccccC--cC---------CCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHH
Confidence 1 23 2466778999999998862 11 1346777777776654 689999999999999
Q ss_pred HHHHhhhcCEEEEccccccCCcchHHHHH
Q psy2378 219 IDLHLNYIDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 219 a~~~l~~ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+.++.+.+|+|.+|++++..++.-..+++
T Consensus 223 v~~l~~Ga~gvlVGsAl~~~~d~~~~~~~ 251 (254)
T 1vc4_A 223 LKALEGLFDAVLIGTSLMRAPDLEAALRE 251 (254)
T ss_dssp HHTTTTTCSEEEECHHHHTSSCHHHHHHH
T ss_pred HHHHHcCCCEEEEeHHHcCCCCHHHHHHH
Confidence 99988789999999999999998777765
No 247
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.37 E-value=0.00047 Score=72.68 Aligned_cols=88 Identities=17% Similarity=0.297 Sum_probs=73.9
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++|+..++.|++.+++--=++...| .+.+++.++++.+.. .+|+..-|||+|.++++++++. ||-|.
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~---------~~~~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVi 102 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDP---------SKRQFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVV 102 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCG---------GGCCHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEEecCccccc---------chhHHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEE
Confidence 468899999999999998522111111 135889999999987 7999999999999999999998 99999
Q ss_pred EccccccCCcchHHHHHhh
Q psy2378 231 LGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 231 iGR~~l~~P~l~~~i~~~~ 249 (956)
+|..++.||.++.++.+.+
T Consensus 103 i~t~a~~~p~li~e~~~~~ 121 (243)
T 4gj1_A 103 IGSMAIKDATLCLEILKEF 121 (243)
T ss_dssp ECTTTTTCHHHHHHHHHHH
T ss_pred EccccccCCchHHHHHhcc
Confidence 9999999999999988754
No 248
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.36 E-value=0.0018 Score=72.89 Aligned_cols=134 Identities=10% Similarity=0.078 Sum_probs=100.0
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-HHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEec
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKII-QKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~-~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir 140 (956)
-|+-..+...+++++.+.++.. ++.||..|-+..|+. +++.-.+.+++||++++ .++.+...
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 3444556666787766555444 446999999987642 35667788999999985 67777777
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
.+|+. +++.++++.|++.|+.+|. +. .++.+|+..+++++.. ++||.+...+.++.++.
T Consensus 202 ~~~~~----~~A~~~~~~l~~~~i~~iE---------------eP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 260 (381)
T 3fcp_A 202 QAWDA----ATGAKGCRELAAMGVDLIE---------------QP-VSAHDNAALVRLSQQI-ETAILADEAVATAYDGY 260 (381)
T ss_dssp TCBCH----HHHHHHHHHHHHTTCSEEE---------------CC-BCTTCHHHHHHHHHHS-SSEEEESTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCcccee---------------CC-CCcccHHHHHHHHHhC-CCCEEECCCcCCHHHHH
Confidence 77763 4688999999999998882 11 2346899999999988 79999999999999999
Q ss_pred HHhhh--cCEEEEcc
Q psy2378 221 LHLNY--IDGVMLGR 233 (956)
Q Consensus 221 ~~l~~--ad~VmiGR 233 (956)
++++. +|.|++--
T Consensus 261 ~~~~~~a~d~v~~k~ 275 (381)
T 3fcp_A 261 QLAQQGFTGAYALKI 275 (381)
T ss_dssp HHHHTTCCSEEEECH
T ss_pred HHHHcCCCCEEEecc
Confidence 99986 99998743
No 249
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.32 E-value=0.0032 Score=64.41 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=91.5
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc
Q psy2378 63 EHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~g~~-~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 141 (956)
+.|+++-+...| |+.++ +.+.++|+|+|=+|.+.. .+.+.++++.+++. +.++.+-+-
T Consensus 53 ~~~i~~~l~~~di~~~~~---~~a~~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~- 111 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEA---DIAFKAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI- 111 (207)
T ss_dssp TSEEEEEEEECSCHHHHH---HHHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-
T ss_pred CCeEEEEEEecCccHHHH---HHHHhCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe-
Confidence 568888777667 77765 455678999999986432 23345566666543 555433221
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEc-ccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVH-ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh-~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
+.+ + ..+.++.+++.|+|++.++ +.+....| . .+.. +.++++++. ++|+++.|||+ ++.+.
T Consensus 112 s~~--~----p~~~~~~~~~~g~d~v~~~~~~~~~~~g---~-----~~~~-~~i~~~~~~--~~pi~v~GGI~-~~~~~ 173 (207)
T 3ajx_A 112 GIE--D----KATRAQEVRALGAKFVEMHAGLDEQAKP---G-----FDLN-GLLAAGEKA--RVPFSVAGGVK-VATIP 173 (207)
T ss_dssp TCS--S----HHHHHHHHHHTTCSEEEEECCHHHHTST---T-----CCTH-HHHHHHHHH--TSCEEEESSCC-GGGHH
T ss_pred cCC--C----hHHHHHHHHHhCCCEEEEEecccccccC---C-----CchH-HHHHHhhCC--CCCEEEECCcC-HHHHH
Confidence 111 1 1233556677899999554 44321111 1 1223 556666553 58999999997 88899
Q ss_pred HHhhh-cCEEEEccccccCCcchHHH
Q psy2378 221 LHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 221 ~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
++++. ||+|.+||++...++....+
T Consensus 174 ~~~~aGad~vvvGsaI~~~~dp~~~~ 199 (207)
T 3ajx_A 174 AVQKAGAEVAVAGGAIYGAADPAAAA 199 (207)
T ss_dssp HHHHTTCSEEEESHHHHTSSSHHHHH
T ss_pred HHHHcCCCEEEEeeeccCCCCHHHHH
Confidence 98888 99999999998876644333
No 250
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.31 E-value=0.00092 Score=69.50 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=60.1
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~ 234 (956)
++.+.+.|+|++.+..-.. . +....+..+.+|+.++++++.++++||++.|||+ ++++.++++. +|+|.+|++
T Consensus 129 ~~~a~~~g~d~v~~~~v~~---t--~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 202 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYP---T--ETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISA 202 (227)
T ss_dssp HHHHHHHTCSEEEECCSSC---C--CSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHH
T ss_pred HHHHHhCCCCEEEECCCcC---C--CCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHH
Confidence 4567789999999732100 0 0011112346899999999887339999999998 9999998887 999999999
Q ss_pred cccCCcchHHH
Q psy2378 235 AYKNPFLMSNF 245 (956)
Q Consensus 235 ~l~~P~l~~~i 245 (956)
++..++....+
T Consensus 203 i~~~~d~~~~~ 213 (227)
T 2tps_A 203 ISQAEDPESAA 213 (227)
T ss_dssp HHTSSCHHHHH
T ss_pred hhcCCCHHHHH
Confidence 98765543333
No 251
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=97.24 E-value=0.0012 Score=75.63 Aligned_cols=149 Identities=9% Similarity=0.023 Sum_probs=110.9
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceee-----eCccccccc---CChHHHHHHHHHHhhccC-
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ-----NGFFGAILM---TKPLLVSDCIKAMRDSVE- 132 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~-----~~~~G~~l~---~~~~~~~eiv~~v~~~~~- 132 (956)
+.-|+...+.+.+++++++.|+.+.+.||..+-+..|.+..+.. .....+... ++++...+.++++|++++
T Consensus 141 ~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~ 220 (421)
T 4hnl_A 141 TAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN 220 (421)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence 34567777778899999999999999999999999886432211 111112221 235677788999999985
Q ss_pred -ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 133 -IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 133 -~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
+++.+-.-.+|+ .++++++++.|++.++.+|. + ..++.+|+..+++++.+ ++||.+.-
T Consensus 221 ~~~l~vDan~~~~----~~~A~~~~~~l~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE 279 (421)
T 4hnl_A 221 QFQMLHDVHERLH----PNQAIQFAKAAEPYQLFFLE---------------D-ILPPDQSHWLTQLRSQS-ATPIATGE 279 (421)
T ss_dssp SSEEEEECTTCSC----HHHHHHHHHHHGGGCCSEEE---------------C-CSCGGGGGGHHHHHTTC-CCCEEECT
T ss_pred CceEeccccccCC----HHHHHHHHHHhhhhhhcccc---------------c-CCcccchHHHHHHHhcC-CCCeecCc
Confidence 455555444554 35688999999999998872 1 12346888899999988 79999999
Q ss_pred CCCCHHHHHHHhhh--cCEEEE
Q psy2378 212 GIKTKKEIDLHLNY--IDGVML 231 (956)
Q Consensus 212 gI~s~~da~~~l~~--ad~Vmi 231 (956)
.+.++.++.++++. +|.|++
T Consensus 280 ~~~~~~~~~~~i~~~a~d~v~~ 301 (421)
T 4hnl_A 280 LFNNPMEWQELVKNRQIDFMRA 301 (421)
T ss_dssp TCCSGGGTHHHHHTTCCSEECC
T ss_pred ceehhHHHHHHHhcCCceEEEe
Confidence 99999999999987 998875
No 252
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=97.16 E-value=0.0034 Score=71.96 Aligned_cols=139 Identities=9% Similarity=-0.026 Sum_probs=110.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
|.+|+++++.|+.+.+.||..+-++.|+ +++.-.+.+++||+++ +.++.|..-.+|+.
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~---- 258 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDV---- 258 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH----
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----
Confidence 5699999999999999999999998764 3666677899999987 46777777667753
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh---CCCceEEEecCCCCHHHHHHHhhh-
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD---FPELEIIINGGIKTKKEIDLHLNY- 225 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~---~~~ipVi~nGgI~s~~da~~~l~~- 225 (956)
++++++++.|++.++.+|. +. .++.+++..+++++. . ++||.+.-.+.+..++.++++.
T Consensus 259 ~~A~~~~~~L~~~~~~~iE---------------eP-~~~~d~~~~~~l~~~l~~~-~iPIa~gE~~~~~~~~~~~l~~~ 321 (441)
T 4a35_A 259 PEAVEWMSKLAKFKPLWIE---------------EP-TSPDDILGHATISKALVPL-GIGIATGEQCHNRVIFKQLLQAK 321 (441)
T ss_dssp HHHHHHHHHHGGGCCSEEE---------------CC-SCTTCHHHHHHHHHHHGGG-TCEEEECTTCCSHHHHHHHHHTT
T ss_pred HHHHHHHHhhcccCccEEe---------------CC-CCcccHHHHHHHHHhccCC-CCCEEeCCccccHHHHHHHHHcC
Confidence 4688999999999988882 11 234688888899886 5 6999999999999999999986
Q ss_pred -cCEEEEccccccCCcchHHHHH
Q psy2378 226 -IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 226 -ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
+|.|++--+-.+...=..++..
T Consensus 322 a~div~~d~~~~GGit~~~kia~ 344 (441)
T 4a35_A 322 ALQFLQIDSCRLGSVNENLSVLL 344 (441)
T ss_dssp CCSEECCCTTTSSHHHHHHHHHH
T ss_pred CCCEEEECccccCCHHHHHHHHH
Confidence 9999886666665555555554
No 253
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=97.15 E-value=0.0034 Score=70.25 Aligned_cols=132 Identities=11% Similarity=0.118 Sum_probs=101.6
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccC
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIG 142 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g 142 (956)
-|+...+...+|+++++.|+.+.+.||..|-+..|.. +++.-.+.+++||++++ .++.+-.-.+
T Consensus 133 v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~ 197 (365)
T 3ik4_A 133 LETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNCG 197 (365)
T ss_dssp EEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 3455677788999999999988889999999987532 46777788899998873 3444444445
Q ss_pred CCCCCcHHHHHHHHHHH--HHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTV--SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 220 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l--~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~ 220 (956)
|+ .+++.++++.| ++.++.+|. + ..++.+++..+++++.. ++||.+.-.+.+++++.
T Consensus 198 ~~----~~~A~~~~~~L~~~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 256 (365)
T 3ik4_A 198 YD----VERALAFCAACKAESIPMVLFE---------------Q-PLPREDWAGMAQVTAQS-GFAVAADESARSAHDVL 256 (365)
T ss_dssp CC----HHHHHHHHHHHHHTTCCEEEEE---------------C-CSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHHH
T ss_pred CC----HHHHHHHHHHHhhCCCCceEEE---------------C-CCCcccHHHHHHHHhhC-CCCEEECCCCCCHHHHH
Confidence 54 35688999999 666666663 1 12345899999999988 69999999999999999
Q ss_pred HHhhh--cCEEEE
Q psy2378 221 LHLNY--IDGVML 231 (956)
Q Consensus 221 ~~l~~--ad~Vmi 231 (956)
++++. +|.|++
T Consensus 257 ~~i~~~a~d~v~i 269 (365)
T 3ik4_A 257 RIAREGTASVINI 269 (365)
T ss_dssp HHHHHTCCSEEEE
T ss_pred HHHHhCCCCEEEE
Confidence 99876 999886
No 254
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=97.14 E-value=0.0014 Score=74.52 Aligned_cols=135 Identities=13% Similarity=0.018 Sum_probs=96.7
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccc-cCChHHHHHHHHHHhhccC--ccEEEEeccCCCCCCcHHHHHHH
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDF 155 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~~~~~ 155 (956)
.+.|+.+.+.||..+-++...+. . ..-|... ..+++...+.+++||++++ .++.+..--+|+. ++++++
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~---~-~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~----~~A~~~ 232 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDF---A-SITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGT----HAAARI 232 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHH---H-TTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCH----HHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCccCc---c-ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCH----HHHHHH
Confidence 44556667789999999621111 0 0112211 1235677899999999984 6777766656653 568899
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEcc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGR 233 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR 233 (956)
++.|++.|+++|.-- ..++.+++..+++++.+ ++||++.+.+.++++++++++. +|.|++=-
T Consensus 233 ~~~L~~~~i~~iEqP---------------~~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 296 (410)
T 3dip_A 233 CNALADYGVLWVEDP---------------IAKMDNIPAVADLRRQT-RAPICGGENLAGTRRFHEMLCADAIDFVMLDL 296 (410)
T ss_dssp HHHGGGGTCSEEECC---------------BSCTTCHHHHHHHHHHH-CCCEEECTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred HHHHHhcCCCEEECC---------------CCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCeEeecc
Confidence 999999999998520 01235888999999987 7999999999999999999986 99999844
Q ss_pred cccc
Q psy2378 234 EAYK 237 (956)
Q Consensus 234 ~~l~ 237 (956)
+-.+
T Consensus 297 ~~~G 300 (410)
T 3dip_A 297 TWCG 300 (410)
T ss_dssp TTSS
T ss_pred cccC
Confidence 4333
No 255
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.03 E-value=0.0037 Score=64.80 Aligned_cols=142 Identities=14% Similarity=0.127 Sum_probs=94.2
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCc------------ceeeeCcccccccCChHHHH----------
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPS------------NRVQNGFFGAILMTKPLLVS---------- 121 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~------------~~~~~~~~G~~l~~~~~~~~---------- 121 (956)
.+++.=|.+.++++..+.|+.+.+.|++.||+-+-.|. +. ..-|.|.- + +++.+.
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~-~~iGaGTV-l-t~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPE-MLIGAGTI-L-NGEQALAAKEAGATFV 110 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTT-CEEEEECC-C-SHHHHHHHHHHTCSEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCC-CEEeECCc-C-CHHHHHHHHHcCCCEE
Confidence 57888899999999999999999999999999554331 01 11223332 1 233333
Q ss_pred -------HHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcC-cHH
Q psy2378 122 -------DCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL-KYN 193 (956)
Q Consensus 122 -------eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~-~~~ 193 (956)
++++..++. ++|+..-+. + ..+ +....++|+|.|-+.... +. ..+
T Consensus 111 vsP~~~~~vi~~~~~~-gi~~ipGv~-------T---ptE-i~~A~~~Gad~vK~FPa~---------------~~gG~~ 163 (232)
T 4e38_A 111 VSPGFNPNTVRACQEI-GIDIVPGVN-------N---PST-VEAALEMGLTTLKFFPAE---------------ASGGIS 163 (232)
T ss_dssp ECSSCCHHHHHHHHHH-TCEEECEEC-------S---HHH-HHHHHHTTCCEEEECSTT---------------TTTHHH
T ss_pred EeCCCCHHHHHHHHHc-CCCEEcCCC-------C---HHH-HHHHHHcCCCEEEECcCc---------------cccCHH
Confidence 333333332 444433221 1 123 334567889998775432 12 468
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
+++.++..+|++|++..|||+ ++.+.++++. ++++.+|..+.
T Consensus 164 ~lkal~~p~p~ip~~ptGGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 164 MVKSLVGPYGDIRLMPTGGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp HHHHHHTTCTTCEEEEBSSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred HHHHHHHHhcCCCeeeEcCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 999999888899999999995 8999999987 88777776543
No 256
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.02 E-value=0.0034 Score=65.09 Aligned_cols=148 Identities=16% Similarity=0.162 Sum_probs=94.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcce-----------eeeCcccccccCChHHHH----------
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----------VQNGFFGAILMTKPLLVS---------- 121 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~-----------~~~~~~G~~l~~~~~~~~---------- 121 (956)
+.|++.=|.+.+++++.+.++.+.+.|++.||+-+-.|... ....++|. ++ +.+.+.
T Consensus 16 ~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl-~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 16 ELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VL-TAEQVVLAKSSGADFV 93 (224)
T ss_dssp HHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CC-SHHHHHHHHHHTCSEE
T ss_pred HCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-Ee-eHHHHHHHHHCCCCEE
Confidence 35778878889999999999988899999999954322100 00112232 11 222222
Q ss_pred -------HHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcC-cHH
Q psy2378 122 -------DCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL-KYN 193 (956)
Q Consensus 122 -------eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~-~~~ 193 (956)
++++..++ .+.|+.+ |.. + ..+ +..+.+.|+|+|-++... +. ..+
T Consensus 94 ~~p~~d~~v~~~ar~-~g~~~i~----Gv~---t---~~e-~~~A~~~Gad~vk~Fpa~---------------~~gG~~ 146 (224)
T 1vhc_A 94 VTPGLNPKIVKLCQD-LNFPITP----GVN---N---PMA-IEIALEMGISAVKFFPAE---------------ASGGVK 146 (224)
T ss_dssp ECSSCCHHHHHHHHH-TTCCEEC----EEC---S---HHH-HHHHHHTTCCEEEETTTT---------------TTTHHH
T ss_pred EECCCCHHHHHHHHH-hCCCEEe----ccC---C---HHH-HHHHHHCCCCEEEEeeCc---------------cccCHH
Confidence 33333333 3444433 211 1 123 345667889998885411 12 368
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcc
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFL 241 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l 241 (956)
+++++++.+|++|+++.||| +++.+.++++. +++|. |+++...+++
T Consensus 147 ~lk~l~~~~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~~~~i 194 (224)
T 1vhc_A 147 MIKALLGPYAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVEKKLI 194 (224)
T ss_dssp HHHHHHTTTTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCHHHH
T ss_pred HHHHHHhhCCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcCcchh
Confidence 89999998878999999999 57899999985 99999 9888766554
No 257
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.99 E-value=0.012 Score=66.97 Aligned_cols=147 Identities=13% Similarity=0.161 Sum_probs=111.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
+-|+.-+=|.-++-+..+ +..+|+|+|=|++.+ .+.+.+.++++..++ .|..+.|-+..
T Consensus 108 ~lPvLrKDFI~d~~Qi~e----a~~~GAD~ILLi~a~---------------l~~~~l~~l~~~a~~-lgm~~LvEvh~- 166 (452)
T 1pii_A 108 PQPILCKDFIIDPYQIYL----ARYYQADACLLMLSV---------------LDDDQYRQLAAVAHS-LEMGVLTEVSN- 166 (452)
T ss_dssp CSCEEEESCCCSHHHHHH----HHHTTCSEEEEETTT---------------CCHHHHHHHHHHHHH-TTCEEEEEECS-
T ss_pred CCCeEEEeccCCHHHHHH----HHHcCCCEEEEEccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeCC-
Confidence 457777767766665443 567899999999763 124678888888876 48877776543
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDL 221 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~ 221 (956)
..+ +.++.++|++.|-+..|. +..+ ..|++...++.+.+| +++||+-|||.|++|+.+
T Consensus 167 ---------~eE-~~~A~~lga~iIGinnr~--L~t~---------~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~ 225 (452)
T 1pii_A 167 ---------EEE-QERAIALGAKVVGINNRD--LRDL---------SIDLNRTRELAPKLGHNVTVISESGINTYAQVRE 225 (452)
T ss_dssp ---------HHH-HHHHHHTTCSEEEEESEE--TTTT---------EECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHH
T ss_pred ---------HHH-HHHHHHCCCCEEEEeCCC--CCCC---------CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHH
Confidence 123 455667899999999886 2221 357888888887765 689999999999999999
Q ss_pred HhhhcCEEEEccccccCCcchHHHHHhhcc
Q psy2378 222 HLNYIDGVMLGREAYKNPFLMSNFDLNYYS 251 (956)
Q Consensus 222 ~l~~ad~VmiGR~~l~~P~l~~~i~~~~~~ 251 (956)
+.+.+|+|.||.+++..++.-..+++.+.+
T Consensus 226 ~~~~a~avLVGealmr~~d~~~~~~~l~~~ 255 (452)
T 1pii_A 226 LSHFANGFLIGSALMAHDDLHAAVRRVLLG 255 (452)
T ss_dssp HTTTCSEEEECHHHHTCSCHHHHHHHHHHC
T ss_pred HHHhCCEEEEcHHHcCCcCHHHHHHHHHHH
Confidence 987799999999999999988888775543
No 258
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.99 E-value=0.0056 Score=63.52 Aligned_cols=182 Identities=13% Similarity=0.064 Sum_probs=109.8
Q ss_pred EccCcCcCCHHHHHHH---HHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEe---cC-CCHHHHHHHHHHHHH
Q psy2378 15 IAPMMNLTDRHCRMFH---RQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQV---GD-NEPKKLAKSAKIIQK 87 (956)
Q Consensus 15 lAPM~~~td~~fR~~~---~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl---~g-~~~~~~~~aA~~~~~ 87 (956)
|.|.+ |...++.+| +++|-..+|+.+-.. ..- +.+.-.+ +-++..-+ .| ...+.-+.-++.+.+
T Consensus 29 L~p~~--t~~~i~~l~~~a~~~~~~aVcv~p~~v-~a~-----~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 29 LSPRA--TEEDVRNLVREASDYGFRCAVLTPVYT-VKI-----SGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLE 99 (234)
T ss_dssp CCTTC--CHHHHHHHHHHHHHHTCSEEEECHHHH-HHH-----HHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred cCCCC--CHHHHHHHHHHHHHhCCCEEEEchHHh-eee-----hHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 56655 455667766 567754555555332 211 1111110 12333333 23 344555666677888
Q ss_pred cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc---CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCC
Q psy2378 88 WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGC 164 (956)
Q Consensus 88 ~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~ 164 (956)
.|+|.||+.. .+|+... .+.+=+.++++.+ +.|+-|=+-.+.- +.++....++...++|+
T Consensus 100 ~GAdEID~vi----------nig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---~~e~i~~a~ria~eaGA 162 (234)
T 1n7k_A 100 AGATELDVVP----------HLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLW---DDKTLSLLVDSSRRAGA 162 (234)
T ss_dssp HTCCEEEECC----------CGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGS---CHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEec----------cchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCC---CHHHHHHHHHHHHHhCC
Confidence 8999999853 2333222 5555566676665 3565333333332 22467788899999999
Q ss_pred CEEEEcccccccccCCCCCCCCCCcCcHHHHHH--HHHhCCCceEEEecCCCCHHHHHHHhhh-cC--EEEEccc
Q psy2378 165 RTFIVHARNAFLKKLNPKQNRKIPILKYNFVYN--LKKDFPELEIIINGGIKTKKEIDLHLNY-ID--GVMLGRE 234 (956)
Q Consensus 165 ~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~--v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad--~VmiGR~ 234 (956)
|+|-.+.+ +++. +.+..+.++- +++.+. +||-+.|||.+.+++.++++. |+ |+..||.
T Consensus 163 DfVKTsTG------~~~~-----~gAt~~dv~l~~m~~~v~-v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~~ 225 (234)
T 1n7k_A 163 DIVKTSTG------VYTK-----GGDPVTVFRLASLAKPLG-MGVKASGGIRSGIDAVLAVGAGADIIGTSSAVK 225 (234)
T ss_dssp SEEESCCS------SSCC-----CCSHHHHHHHHHHHGGGT-CEEEEESSCCSHHHHHHHHHTTCSEEEETTHHH
T ss_pred CEEEeCCC------CCCC-----CCCCHHHHHHHHHHHHHC-CCEEEecCCCCHHHHHHHHHcCccccchHHHHH
Confidence 99976532 2210 2356666666 777775 999999999999999999987 99 5555554
No 259
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.98 E-value=0.004 Score=63.57 Aligned_cols=152 Identities=16% Similarity=0.132 Sum_probs=97.7
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCC--------------cceeee------------CcccccccC
Q psy2378 62 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCP--------------SNRVQN------------GFFGAILMT 115 (956)
Q Consensus 62 ~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP--------------~~~~~~------------~~~G~~l~~ 115 (956)
...|++.=|.+.++++....|+.+.+.|++.||+.+-.| ...+-. -..|+.+.-
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 467899999999999999999999999999999966433 211100 002222222
Q ss_pred ChHHHHHHHHHHhhccCc------cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCc
Q psy2378 116 KPLLVSDCIKAMRDSVEI------DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPI 189 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~------pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~ 189 (956)
-|.+-.++++..++. ++ |+.--+- + ..| +....++|+|.|-++.... .
T Consensus 91 sP~~~~evi~~~~~~-~v~~~~~~~~~PG~~-------T---ptE-~~~A~~~Gad~vK~FPa~~------------~-- 144 (217)
T 3lab_A 91 SPGLTPELIEKAKQV-KLDGQWQGVFLPGVA-------T---ASE-VMIAAQAGITQLKCFPASA------------I-- 144 (217)
T ss_dssp ESSCCHHHHHHHHHH-HHHCSCCCEEEEEEC-------S---HHH-HHHHHHTTCCEEEETTTTT------------T--
T ss_pred eCCCcHHHHHHHHHc-CCCccCCCeEeCCCC-------C---HHH-HHHHHHcCCCEEEECcccc------------c--
Confidence 233333334433332 44 4444321 1 122 3445778899887764320 0
Q ss_pred CcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcc
Q psy2378 190 LKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 190 ~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l 241 (956)
-..++++.++..+|++|++..|||+ ++.+.++++. +..+..| ..+.+|++
T Consensus 145 gG~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgG-s~l~~~~~ 195 (217)
T 3lab_A 145 GGAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICAGG-SWLTESKL 195 (217)
T ss_dssp THHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEE-SGGGCHHH
T ss_pred cCHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCCCEEEEEC-hhhcChhH
Confidence 1368899999988899999999996 8999999987 7766555 45555544
No 260
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.97 E-value=0.0053 Score=64.43 Aligned_cols=84 Identities=12% Similarity=0.034 Sum_probs=60.9
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
+....+.|+|+|.+..-.. ..+ ++. .++..|+.++++++.. .++||++-||| +++++.++++. ||+|.+|+
T Consensus 148 a~~A~~~GaDyI~vgpvf~---T~t-K~~--~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWP---TPT-KPG--RAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp HHHHHHSSCSEEEECCSSC---CCC--------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred HHHHhhCCCCEEEEcCccC---CCC-CCC--cchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 4556679999999965321 000 111 1356899999998763 27999999999 89999999988 99999999
Q ss_pred ccccCCcchHHHH
Q psy2378 234 EAYKNPFLMSNFD 246 (956)
Q Consensus 234 ~~l~~P~l~~~i~ 246 (956)
+++..|+....++
T Consensus 221 ai~~a~dp~~a~~ 233 (243)
T 3o63_A 221 AITSADDPRAAAE 233 (243)
T ss_dssp HHHTCSSHHHHHH
T ss_pred HHhCCCCHHHHHH
Confidence 9998777554444
No 261
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.92 E-value=0.033 Score=57.68 Aligned_cols=166 Identities=13% Similarity=0.141 Sum_probs=102.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCE--EEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEe
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKH 139 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~--IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKi 139 (956)
...+..+|...|...+.++.+.+.++|+|. ||+--|.=++|. .+| ..+++++|+.+ +.|+.+-+
T Consensus 5 ~~~i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~---t~G----------~~~v~~lr~~~p~~~~dvhL 71 (227)
T 1tqx_A 5 KAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNL---SFG----------PPVINNLKKYTKSIFFDVHL 71 (227)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB---CCC----------HHHHHHHGGGCSSCEEEEEE
T ss_pred CCeEEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcch---hcC----------HHHHHHHHHhCCCCcEEEEE
Confidence 345788999999999999999999999997 666444422222 222 24666667666 56665554
Q ss_pred ccCCC------------------CCC-cHHHHHHHHHHHHHcCCC-EEEEccccc--------------------ccccC
Q psy2378 140 RIGID------------------DIN-SYDFVRDFVGTVSSAGCR-TFIVHARNA--------------------FLKKL 179 (956)
Q Consensus 140 r~g~~------------------~~~-~~~~~~~~a~~l~~~G~~-~i~vh~r~~--------------------~~~g~ 179 (956)
-.... ... .....+++|+.+.+.|.. .+.+...|. ...|+
T Consensus 72 mv~dp~~~i~~~~~Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf 151 (227)
T 1tqx_A 72 MVEYPEKYVPLLKTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGF 151 (227)
T ss_dssp ESSCGGGGGGGCTTSSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTC
T ss_pred EEcCHHHHHHHHHhCCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCC
Confidence 32110 001 111222222255555543 233322221 01122
Q ss_pred CCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 180 NPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 180 ~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
.|+ .-.+..++-++++++..++++|..-|||+ ++.+.++.+. ||.+.+|++++..++.-..+
T Consensus 152 ~gq---~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i 214 (227)
T 1tqx_A 152 GGQ---SFMHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISASHGANIIVAGTSIFNAEDPKYVI 214 (227)
T ss_dssp SSC---CCCGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHHTCSSHHHHH
T ss_pred CCc---ccchHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHhCCCCHHHHH
Confidence 221 12345688889999877678999999995 8999999988 99999999999876643333
No 262
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.91 E-value=0.0038 Score=66.04 Aligned_cols=130 Identities=13% Similarity=0.081 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCccccccc---CChHHHHHHHHHHhhccCccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM---TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~---~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~ 149 (956)
...+.=+.-|+.+.+.|+|.||+=+ .+|..+. .+.+.+.+-+++|+++++ +..+|.=+-...-.+.
T Consensus 97 ~~~e~K~~Ea~~Av~~GAdEIDmVi----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~ 165 (297)
T 4eiv_A 97 GTPDTVSLEAVGALKDGADEIECLI----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGG 165 (297)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeee----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcH
Confidence 3455555566677788999999832 2454444 578889999999999885 4456654422111111
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-----------------------CCce
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-----------------------PELE 206 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-----------------------~~ip 206 (956)
+.....++...++|+|+|--+.+. .+ +.+..+.++-+++.+ +++-
T Consensus 166 e~i~~A~~ia~~AGADFVKTSTGf------~~------~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vg 233 (297)
T 4eiv_A 166 DIISRAAVAALEGGADFLQTSSGL------GA------THATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIG 233 (297)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSS------SS------CCCCHHHHHHHHHHHHHHHCC------------------CCE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCCC------CC------CCCCHHHHHHHHHHHHHHhccccccccccccccccccCCcee
Confidence 224577888889999999766443 11 123444333333222 4678
Q ss_pred EEEe-cCCCCHHHHHHHhhh
Q psy2378 207 IIIN-GGIKTKKEIDLHLNY 225 (956)
Q Consensus 207 Vi~n-GgI~s~~da~~~l~~ 225 (956)
|=++ |||.|.++|.++++.
T Consensus 234 vKAs~GGIrt~e~A~~~i~~ 253 (297)
T 4eiv_A 234 IKIEVGDVHMAETADFLMQM 253 (297)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEecCCCCCCHHHHHHHHHH
Confidence 8898 999999999999985
No 263
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=96.89 E-value=0.0053 Score=69.41 Aligned_cols=120 Identities=12% Similarity=0.103 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHc-CCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHH
Q psy2378 75 PKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 75 ~~~~~~aA~~~~~~-G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~ 152 (956)
|+++++.|+.+.+. ||..|-+..| .+++.-.+.+++||+++ +.++.|..-.+|+. +++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~----~~A 228 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSV----PDS 228 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCH----HHH
Confidence 69999999888887 9999999765 13566678889999887 55677766666753 568
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVM 230 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~Vm 230 (956)
+++++.|++.|+.+|. +. . + +++..+++++.. ++||.+...+.+++++.++++. +|.|+
T Consensus 229 ~~~~~~l~~~~i~~iE---------------qP-~-~-d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 289 (398)
T 4dye_A 229 VRAGIALEELDLEYLE---------------DP-C-V-GIEGMAQVKAKV-RIPLCTNMCVVRFEDFAPAMRLNAVDVIH 289 (398)
T ss_dssp HHHHHHHGGGCCSEEE---------------CC-S-S-HHHHHHHHHHHC-CSCEEESSSCCSGGGHHHHHHTTCCSEEE
T ss_pred HHHHHHHhhcCCCEEc---------------CC-C-C-CHHHHHHHHhhC-CCCEEeCCcCCCHHHHHHHHHhCCCCEEE
Confidence 8999999999999883 11 1 2 888899999988 7999999999999999999986 99998
Q ss_pred Ecc
Q psy2378 231 LGR 233 (956)
Q Consensus 231 iGR 233 (956)
+--
T Consensus 290 ~k~ 292 (398)
T 4dye_A 290 GDV 292 (398)
T ss_dssp ECH
T ss_pred eCc
Confidence 743
No 264
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.77 E-value=0.0086 Score=61.59 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=94.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcce-----------eeeCcccccccCChHHHHHHH-------
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----------VQNGFFGAILMTKPLLVSDCI------- 124 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~-----------~~~~~~G~~l~~~~~~~~eiv------- 124 (956)
+.|++.=|-+.+++++.+.++.+.+.|++.||+-+-.|... ....++|. ++ +.+.+...+
T Consensus 15 ~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-vi-~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 15 TGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-VL-NPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-CC-SHHHHHHHHHHTCSCE
T ss_pred HCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-EE-EHHHHHHHHHcCCCEE
Confidence 57899999999999999999999999999999965322100 00112332 22 222222221
Q ss_pred ----------HHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcC-cHH
Q psy2378 125 ----------KAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL-KYN 193 (956)
Q Consensus 125 ----------~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~-~~~ 193 (956)
+..++ .+.|+..- .. + ..+ +....+.|+|+|-+++.. +. ..+
T Consensus 93 ~~p~~d~~v~~~~~~-~g~~~i~G----~~---t---~~e-~~~A~~~Gad~v~~Fpa~---------------~~gG~~ 145 (214)
T 1wbh_A 93 ISPGLTEPLLKAATE-GTIPLIPG----IS---T---VSE-LMLGMDYGLKEFKFFPAE---------------ANGGVK 145 (214)
T ss_dssp EESSCCHHHHHHHHH-SSSCEEEE----ES---S---HHH-HHHHHHTTCCEEEETTTT---------------TTTHHH
T ss_pred EcCCCCHHHHHHHHH-hCCCEEEe----cC---C---HHH-HHHHHHCCCCEEEEecCc---------------cccCHH
Confidence 11111 23333221 11 1 112 344556778877775411 12 368
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccCCcc
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFL 241 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~P~l 241 (956)
+++++++.+|++|+++.||| +++.+.++++. +++|. |+++...+++
T Consensus 146 ~lk~i~~~~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 146 ALQAIAGPFSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHHHhhhCCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 89999998888999999999 57899999985 99999 9988877655
No 265
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.73 E-value=0.0075 Score=63.54 Aligned_cols=130 Identities=13% Similarity=0.119 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCc-cEEEEecc--CCCCCCcHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRI--GIDDINSYD 150 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-pv~vKir~--g~~~~~~~~ 150 (956)
..+.-+.-++.+.+.|+|.||+-+ .+|..+..+.+.+.+-+++|++.++- +..+|.=+ +.-.. .+
T Consensus 83 ~~~~Kv~E~~~Av~~GAdEIDmVi----------nig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d--~e 150 (260)
T 1p1x_A 83 DIDIALAETRAAIAYGADEVDVVF----------PYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKD--EA 150 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCS--HH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEec----------cHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCc--HH
Confidence 344455566777788999999853 24555556788888888999988742 34455433 22211 12
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh-----C-CCceEEEecCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-----F-PELEIIINGGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~-----~-~~ipVi~nGgI~s~~da~~~l~ 224 (956)
.....++...++|+|+|-.+.+. + .+.+..+.++-+++. + +++||-++|||.|.+++.++++
T Consensus 151 ~i~~a~~ia~eaGADfVKTSTGf------~------~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ 218 (260)
T 1p1x_A 151 LIRKASEISIKAGADFIKTSTGK------V------AVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA 218 (260)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSC------S------SCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeCCCC------C------CCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHH
Confidence 24578888999999999766432 1 123566655444443 2 3699999999999999999997
Q ss_pred h-cC
Q psy2378 225 Y-ID 227 (956)
Q Consensus 225 ~-ad 227 (956)
. ++
T Consensus 219 aga~ 222 (260)
T 1p1x_A 219 IADE 222 (260)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 5 44
No 266
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.72 E-value=0.011 Score=63.70 Aligned_cols=193 Identities=12% Similarity=0.105 Sum_probs=120.7
Q ss_pred cCcCCHHHHHHHHHcCCCcEEEecc-cccccccCC-------chhcccc-----CCCCCCEEEEec-C-CCHHHHHHHHH
Q psy2378 19 MNLTDRHCRMFHRQITRYSWLYTEM-FTTQAILGN-------KKHCLDF-----NAEEHPIAFQVG-D-NEPKKLAKSAK 83 (956)
Q Consensus 19 ~~~td~~fR~~~~~~g~~~l~~tem-~~~~~l~~~-------~~~~~~~-----~~~~~p~~vQl~-g-~~~~~~~~aA~ 83 (956)
.+.=|..+-+++.+.| ++.+++.- -.+..+ |. ...++.. ...+.|+++=+= | .++++..+.++
T Consensus 34 ~~ayD~~sA~l~e~aG-~dai~vs~~s~a~~~-G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~ 111 (305)
T 3ih1_A 34 PGAHDAMAALVARNTG-FLALYLSGAAYTASK-GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAV 111 (305)
T ss_dssp EBCSSHHHHHHHHHTT-CSCEEECHHHHHHHH-TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHH
T ss_pred ecCcCHHHHHHHHHcC-CCEEEECcHHHHHhC-CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHH
Confidence 3566788888888887 56666552 111111 21 1111100 112468887772 2 35889999999
Q ss_pred HHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcC
Q psy2378 84 IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAG 163 (956)
Q Consensus 84 ~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G 163 (956)
.+.++|+++|.|--+.. ++.+..-.|.. +-..+...+-|++++++ +.++.|--|..-......+++++=+++++++|
T Consensus 112 ~l~~aGaagv~iED~~~-~krcGh~~gk~-l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAG 188 (305)
T 3ih1_A 112 EMVEAKVAAVQIEDQQL-PKKCGHLNGKK-LVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAG 188 (305)
T ss_dssp HHHHTTCSEEEEECBCS-SCCTTCTTCCC-BCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCcEEEECCCCC-CcccCCCCCCc-ccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcC
Confidence 99999999999976532 22222222333 44555566666777776 67766666653211112467888899999999
Q ss_pred CCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe---cC---CCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 164 CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG---IKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 164 ~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n---Gg---I~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
+|.|-+++.. +.+.++++.+.+ ++|+++| |+ ..+.+ ++-+- ...|.+|-.++
T Consensus 189 AD~i~~e~~~-----------------~~~~~~~i~~~~-~~P~~~n~~~~g~tp~~~~~---eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 189 ADAIFPEALQ-----------------SEEEFRLFNSKV-NAPLLANMTEFGKTPYYSAE---EFANMGFQMVIYPVTSL 247 (305)
T ss_dssp CSEEEETTCC-----------------SHHHHHHHHHHS-CSCBEEECCTTSSSCCCCHH---HHHHTTCSEEEECSHHH
T ss_pred CCEEEEcCCC-----------------CHHHHHHHHHHc-CCCEEEeecCCCCCCCCCHH---HHHHcCCCEEEEchHHH
Confidence 9999998642 567889999998 6999876 23 23433 33333 88888876554
Q ss_pred c
Q psy2378 237 K 237 (956)
Q Consensus 237 ~ 237 (956)
.
T Consensus 248 r 248 (305)
T 3ih1_A 248 R 248 (305)
T ss_dssp H
T ss_pred H
Confidence 3
No 267
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.72 E-value=0.028 Score=59.27 Aligned_cols=153 Identities=9% Similarity=0.076 Sum_probs=98.0
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEecccccccccCC-------chhcccc-----CCCCC-CEEEEec-C---CCHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGN-------KKHCLDF-----NAEEH-PIAFQVG-D---NEPKKLAK 80 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~-------~~~~~~~-----~~~~~-p~~vQl~-g---~~~~~~~~ 80 (956)
|.+.=|.++.+++.+.| +|.+.+.--......|. ..+++.. ...+. ++++=+- | .+|++..+
T Consensus 21 ~~tayDa~sA~l~e~aG-~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 21 MLTAYESSFAALMDDAG-VEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEECCSHHHHHHHHHTT-CCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEeCcCHHHHHHHHHcC-CCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 44567899999999998 78887752211111121 1112111 11233 4555543 3 36999988
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC---------C----CCCC
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG---------I----DDIN 147 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g---------~----~~~~ 147 (956)
.|.++.++|+++|.|--| ....+.|++++++ ++||..-+.+. + .. +
T Consensus 100 na~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt-~ 158 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGG-------------------VWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRG-G 158 (275)
T ss_dssp HHHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGTTC------------
T ss_pred HHHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeCh-H
Confidence 888887799999999643 1345556666653 88987444321 0 11 2
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 148 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
..+++++=|++++++|+++|.+.+-. -+.+++|.+.+ ++|+|+-|
T Consensus 159 ~a~~~i~rA~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIG 203 (275)
T 1o66_A 159 KAQALLNDAKAHDDAGAAVVLMECVL------------------AELAKKVTETV-SCPTIGIG 203 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEES
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEEC
Confidence 23578888999999999999987621 25678999998 79999865
No 268
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.68 E-value=0.017 Score=61.94 Aligned_cols=196 Identities=12% Similarity=0.075 Sum_probs=117.3
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEecc--cccc-cccC----Cchhccc----c-CCCCCCEEEEe---cCCCHHHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTEM--FTTQ-AILG----NKKHCLD----F-NAEEHPIAFQV---GDNEPKKLAKSA 82 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~tem--~~~~-~l~~----~~~~~~~----~-~~~~~p~~vQl---~g~~~~~~~~aA 82 (956)
|.+.=|..+-+++.+.| ++.+++.- ++.. +... ....++. + ...+.|+++=+ +| +|++..+.+
T Consensus 19 ~~~a~D~~sA~~~~~aG-~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~v 96 (290)
T 2hjp_A 19 AMAAHNPLVAKLAEQAG-FGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-NAVNVHYVV 96 (290)
T ss_dssp EEECSSHHHHHHHHHHT-CSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS-SHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHH
Confidence 44566888888888887 78887773 3222 1110 0111111 0 22357887766 35 899999999
Q ss_pred HHHHHcCCCEEEecCCCCcceeeeCcc--cccccCChHHHHHHHHHHhhcc-CccEEEEeccCCC-CCCcHHHHHHHHHH
Q psy2378 83 KIIQKWGYDEINLNCGCPSNRVQNGFF--GAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGID-DINSYDFVRDFVGT 158 (956)
Q Consensus 83 ~~~~~~G~d~IeiN~gCP~~~~~~~~~--G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~-~~~~~~~~~~~a~~ 158 (956)
+.+.++|+++|-|--+.. ++++..-. |..|. ..+...+-|++++++- ..++.|--|..-. .....+++++=++.
T Consensus 97 ~~l~~aGa~gv~iED~~~-~k~cgH~~~~~k~l~-p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~a 174 (290)
T 2hjp_A 97 PQYEAAGASAIVMEDKTF-PKDTSLRTDGRQELV-RIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQA 174 (290)
T ss_dssp HHHHHHTCSEEEEECBCS-SCCC-------CCBC-CHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCeEEEEcCCCC-CccccccccCCCccc-CHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHH
Confidence 999999999999976642 22222211 33343 4444444556555542 2344444444211 12235678888999
Q ss_pred HHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCC--ceEEEec---CCCCHHHHHHHhhh-cCEEEEc
Q psy2378 159 VSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE--LEIIING---GIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 159 l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~--ipVi~nG---gI~s~~da~~~l~~-ad~VmiG 232 (956)
++++|+|.|-++++. .+.+.++++.+.+ + +|+++|- ...+.++..++ . ...|.+|
T Consensus 175 y~eAGAd~i~~e~~~----------------~~~~~~~~i~~~~-~~~vP~i~n~~~~~~~~~~eL~~l--G~v~~v~~~ 235 (290)
T 2hjp_A 175 YEEAGADAILIHSRQ----------------KTPDEILAFVKSW-PGKVPLVLVPTAYPQLTEADIAAL--SKVGIVIYG 235 (290)
T ss_dssp HHHTTCSEEEECCCC----------------SSSHHHHHHHHHC-CCSSCEEECGGGCTTSCHHHHHTC--TTEEEEEEC
T ss_pred HHHcCCcEEEeCCCC----------------CCHHHHHHHHHHc-CCCCCEEEeccCCCCCCHHHHHhc--CCeeEEEec
Confidence 999999999999854 2456778898888 5 9999873 23454433332 3 5556665
Q ss_pred cccc
Q psy2378 233 REAY 236 (956)
Q Consensus 233 R~~l 236 (956)
-.++
T Consensus 236 ~~~~ 239 (290)
T 2hjp_A 236 NHAI 239 (290)
T ss_dssp SHHH
T ss_pred hHHH
Confidence 5443
No 269
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.65 E-value=0.0057 Score=71.16 Aligned_cols=129 Identities=22% Similarity=0.191 Sum_probs=81.2
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHH
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGT 158 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~ 158 (956)
.+.+..+.++|+|.+-+.- .|+. .....+.++.+++.+++|+.+|--. + .+-++.
T Consensus 230 ~~~a~~l~~~gvd~lvvdt-----------a~G~----~~~~L~~I~~l~~~~~vpvi~k~v~------~----~~~a~~ 284 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDT-----------AHAH----NLKAIKSMKEMRQKVDADFIVGNIA------N----PKAVDD 284 (486)
T ss_dssp HHHHHHHHHTTCSEEEEEC-----------SCCC----CHHHHHHHHHHHHTCCSEEEEEEEC------C----HHHHTT
T ss_pred HHHHHHHHHhcCCceEEEe-----------cCCc----EeehhhHHHHHHHHhCCccccCCcC------C----HHHHHH
Confidence 3556667778888775531 1221 2334566788888889999887322 1 123455
Q ss_pred HHHcCCCEEEEcccccccccC----CCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 159 VSSAGCRTFIVHARNAFLKKL----NPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 159 l~~~G~~~i~vh~r~~~~~g~----~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
+. |+|.|.+ +........ ++... .....+..+.++++.+ ++|||+.|||.+..|+.++|.. ||+||+|+
T Consensus 285 l~--G~d~v~v-g~g~g~~~~~r~~~~~g~--~~~~~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 285 LT--FADAVKV-GIGPGSICTTRIVAGVGV--PQITAVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp CT--TSSEEEE-CSSCSTTBCHHHHTCCCC--CHHHHHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred hh--CCCeEEE-eeeeccceeeeEEeecCc--chHHHHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCceeeCh
Confidence 55 9999999 221100000 00000 0011234455666655 7999999999999999999988 99999999
Q ss_pred ccccC
Q psy2378 234 EAYKN 238 (956)
Q Consensus 234 ~~l~~ 238 (956)
.++.-
T Consensus 359 ~~~~~ 363 (486)
T 2cu0_A 359 LLAGT 363 (486)
T ss_dssp TTTTB
T ss_pred hhhcC
Confidence 98864
No 270
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=96.63 E-value=0.015 Score=65.37 Aligned_cols=132 Identities=13% Similarity=0.089 Sum_probs=100.0
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC---ccEEEEec
Q psy2378 64 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE---IDITVKHR 140 (956)
Q Consensus 64 ~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~---~pv~vKir 140 (956)
-|+-..+.+.+++.+++.|+.+.+.||..+-+..|. .+++.-.+.++++|++++ +++.+-.-
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 345556777899999999988888999999987553 257778889999998886 44555545
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHH--
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE-- 218 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~d-- 218 (956)
.+|+.. +++++++.|++.++.+|. +. .++.+|+..+++++.. ++||.+.=.+.+..+
T Consensus 217 ~~~~~~----~a~~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 275 (377)
T 2pge_A 217 GAFSPA----NAPQRLKRLSQFHLHSIE---------------QP-IRQHQWSEMAALCANS-PLAIALDEELIGLGAEQ 275 (377)
T ss_dssp TBBCTT----THHHHHHHHHTTCCSEEE---------------CC-BCSSCHHHHHHHHHHC-SSCEEESGGGTTCCTHH
T ss_pred CCCCHH----HHHHHHHHHhcCCCcEEE---------------cc-CCcccHHHHHHHHhhC-CCcEEECCccCCcchHH
Confidence 567643 377899999999988772 11 2346899999999987 699999888888887
Q ss_pred HHHHhhh--cCEEEE
Q psy2378 219 IDLHLNY--IDGVML 231 (956)
Q Consensus 219 a~~~l~~--ad~Vmi 231 (956)
+.++++. +|.|.+
T Consensus 276 ~~~~i~~~a~d~i~i 290 (377)
T 2pge_A 276 RSAMLDAIRPQYIIL 290 (377)
T ss_dssp HHHHHHHHCCSEEEE
T ss_pred HHHHHHhCCCCEEEE
Confidence 6688875 998876
No 271
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.62 E-value=0.018 Score=62.47 Aligned_cols=133 Identities=11% Similarity=0.175 Sum_probs=83.8
Q ss_pred HHHHHHHHcCCCEEEec--CCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc---CCCCCCcH-HHHH
Q psy2378 80 KSAKIIQKWGYDEINLN--CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI---GIDDINSY-DFVR 153 (956)
Q Consensus 80 ~aA~~~~~~G~d~IeiN--~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---g~~~~~~~-~~~~ 153 (956)
..++.+.++|+|+|-+. .+...+ . ....+.+.+++++.++ .++|+.+=+-. ...+.... +...
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~---------~-~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~ 180 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDED---------A-QQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAII 180 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSC---------H-HHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCcc---------H-HHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHH
Confidence 44556778899999953 321100 0 1112344444444443 48998777632 22222222 3455
Q ss_pred HHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh----CCCce-EEEecCCCCHHH----HHHHhh
Q psy2378 154 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD----FPELE-IIINGGIKTKKE----IDLHLN 224 (956)
Q Consensus 154 ~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~----~~~ip-Vi~nGgI~s~~d----a~~~l~ 224 (956)
+.++.+.+.|+|++-++.... + . .+|+.+.++.+. . .+| |+..||+ +.++ +..+++
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~---~---~-------g~~~~~~~vv~~~~~~~-~~P~Vv~aGG~-~~~~~~~~~~~a~~ 245 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLY---G---K-------GARSDLLTASQRLNGHI-NMPWVILSSGV-DEKLFPRAVRVAME 245 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGG---G---C-------SCHHHHHHHHHHHHHTC-CSCEEECCTTS-CTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCcC---C---C-------CCHHHHHHHHHhccccC-CCCeEEEecCC-CHHHHHHHHHHHHH
Confidence 668899999999999986431 1 0 166666666665 6 699 9999999 5543 556666
Q ss_pred h-cCEEEEccccccC
Q psy2378 225 Y-IDGVMLGREAYKN 238 (956)
Q Consensus 225 ~-ad~VmiGR~~l~~ 238 (956)
. ++||.+||.+...
T Consensus 246 aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 246 AGASGFLAGRAVWSS 260 (304)
T ss_dssp TTCCEEEESHHHHGG
T ss_pred cCCeEEEEehHHhCc
Confidence 6 9999999999877
No 272
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.60 E-value=0.012 Score=62.53 Aligned_cols=129 Identities=12% Similarity=0.107 Sum_probs=84.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChH---HHHHHHHHHhhccCccEEEEecc--CCCCCCc
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPL---LVSDCIKAMRDSVEIDITVKHRI--GIDDINS 148 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~---~~~eiv~~v~~~~~~pv~vKir~--g~~~~~~ 148 (956)
..+.-+.-++.+.+.|+|.||+-+ .+|..+..+.+ .+.+-+++|+++++ +..+|.=+ +.-. +
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVi----------nig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~--d 170 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVI----------NYKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELK--T 170 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC----------CHHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHC--S
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec----------chHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCC--c
Confidence 344455566677788999999853 24544455667 88888899999884 24455433 2211 1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcH---HHHHHHHHh--------CCCceEEEecCCCCHH
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY---NFVYNLKKD--------FPELEIIINGGIKTKK 217 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~---~~i~~v~~~--------~~~ipVi~nGgI~s~~ 217 (956)
.+.....++...++|+|+|-.+.+. ++ +.+.. ..+.++.+. -++++|-++|||.|.+
T Consensus 171 ~e~i~~A~~ia~eaGADfVKTSTGf------~~------~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e 238 (281)
T 2a4a_A 171 EDLIIKTTLAVLNGNADFIKTSTGK------VQ------INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLN 238 (281)
T ss_dssp HHHHHHHHHHHHTTTCSEEECCCSC------SS------CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCCC------CC------CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHH
Confidence 1224578888999999999766432 11 12334 344443321 2369999999999999
Q ss_pred HHHHHhhh-cC
Q psy2378 218 EIDLHLNY-ID 227 (956)
Q Consensus 218 da~~~l~~-ad 227 (956)
++.++++. ++
T Consensus 239 ~al~~i~aga~ 249 (281)
T 2a4a_A 239 TASHYILLARR 249 (281)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999975 44
No 273
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=96.59 E-value=0.0056 Score=69.22 Aligned_cols=127 Identities=12% Similarity=0.220 Sum_probs=93.0
Q ss_pred CEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccC
Q psy2378 65 PIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 142 (956)
|+-..+. +.+++++.+.|+.+.+.||..+-+..| | ..+ .+.+++||+++ ++.+.+-.-.+
T Consensus 151 ~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~~~~~l~vDaN~~ 212 (393)
T 1wuf_A 151 KVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P-------------NKD----IQFVEAVRKSFPKLSLMADANSA 212 (393)
T ss_dssp EBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T-------------TBS----HHHHHHHHTTCTTSEEEEECTTC
T ss_pred eeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h-------------HHH----HHHHHHHHHHcCCCEEEEECCCC
Confidence 3334454 346999999998888889999999654 1 112 46678888877 33344443345
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+. +++ ++++.|++.++.+|. +. .++.||+..+++++.. ++||.+.-.+.+++++.++
T Consensus 213 ~~~----~~a-~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~ 270 (393)
T 1wuf_A 213 YNR----EDF-LLLKELDQYDLEMIE---------------QP-FGTKDFVDHAWLQKQL-KTRICLDENIRSVKDVEQA 270 (393)
T ss_dssp CCG----GGH-HHHHTTGGGTCSEEE---------------CC-SCSSCSHHHHHHHTTC-SSEEEECTTCCSHHHHHHH
T ss_pred CCH----HHH-HHHHHHHhCCCeEEE---------------CC-CCCcCHHHHHHHHHhC-CCCEEECCCcCCHHHHHHH
Confidence 543 346 888999999988883 11 2345888899999887 7999999999999999999
Q ss_pred hhh--cCEEEE
Q psy2378 223 LNY--IDGVML 231 (956)
Q Consensus 223 l~~--ad~Vmi 231 (956)
++. +|.|.+
T Consensus 271 i~~~a~d~v~i 281 (393)
T 1wuf_A 271 HSIGSCRAINL 281 (393)
T ss_dssp HHHTCCSEEEE
T ss_pred HHhCCCCEEEe
Confidence 976 899887
No 274
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.58 E-value=0.0032 Score=65.30 Aligned_cols=149 Identities=11% Similarity=0.091 Sum_probs=91.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcce-----------eeeCcccccccCChHHHHHHHH------
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----------VQNGFFGAILMTKPLLVSDCIK------ 125 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~-----------~~~~~~G~~l~~~~~~~~eiv~------ 125 (956)
+.|++.=+.+.+++++.+.++.+.+.|++.||+-+-.|... ....++|. ++ +.+.+...++
T Consensus 25 ~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt-vl-~~d~~~~A~~aGAd~v 102 (225)
T 1mxs_A 25 KARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT-VL-DRSMFAAVEAAGAQFV 102 (225)
T ss_dssp HHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC-CC-SHHHHHHHHHHTCSSE
T ss_pred HCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe-Ee-eHHHHHHHHHCCCCEE
Confidence 35677778888999898889888888999999944222100 00112333 11 2222222221
Q ss_pred -----------HHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHH
Q psy2378 126 -----------AMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF 194 (956)
Q Consensus 126 -----------~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~ 194 (956)
..+. .+.|+.. |. .+ ..+ +..+.+.|+|+|-++.... ....++
T Consensus 103 ~~p~~d~~v~~~~~~-~g~~~i~----G~---~t---~~e-~~~A~~~Gad~vk~FPa~~--------------~~G~~~ 156 (225)
T 1mxs_A 103 VTPGITEDILEAGVD-SEIPLLP----GI---ST---PSE-IMMGYALGYRRFKLFPAEI--------------SGGVAA 156 (225)
T ss_dssp ECSSCCHHHHHHHHH-CSSCEEC----EE---CS---HHH-HHHHHTTTCCEEEETTHHH--------------HTHHHH
T ss_pred EeCCCCHHHHHHHHH-hCCCEEE----ee---CC---HHH-HHHHHHCCCCEEEEccCcc--------------ccCHHH
Confidence 1111 2333221 11 11 112 3445567788777754110 013678
Q ss_pred HHHHHHhCCCceEEEecCCCCHHHHHHHhh-h-cCEEEEccccccCCcc
Q psy2378 195 VYNLKKDFPELEIIINGGIKTKKEIDLHLN-Y-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 195 i~~v~~~~~~ipVi~nGgI~s~~da~~~l~-~-ad~VmiGR~~l~~P~l 241 (956)
++.++..+|++|+++.||| +++.+.++++ . +++|. |+++...+++
T Consensus 157 lk~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 157 IKAFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp HHHHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred HHHHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 8999988888999999999 5889999999 5 99999 9988776554
No 275
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.51 E-value=0.025 Score=61.04 Aligned_cols=196 Identities=12% Similarity=0.078 Sum_probs=115.4
Q ss_pred cCcCCHHHHHHHHHcCCCcEEEe-cccccccccC--C-----chh-------ccccCCCCCCEEEEe---cCCCHHHHHH
Q psy2378 19 MNLTDRHCRMFHRQITRYSWLYT-EMFTTQAILG--N-----KKH-------CLDFNAEEHPIAFQV---GDNEPKKLAK 80 (956)
Q Consensus 19 ~~~td~~fR~~~~~~g~~~l~~t-em~~~~~l~~--~-----~~~-------~~~~~~~~~p~~vQl---~g~~~~~~~~ 80 (956)
.+.=|..+-+++.+.| .+.+++ ..-.+....| + ... +....+-..|+++=+ +| +|++..+
T Consensus 30 ~~a~D~~sA~l~e~aG-f~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~ 107 (307)
T 3lye_A 30 PGVYDGLSARTAMELG-FKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVAR 107 (307)
T ss_dssp EEECSHHHHHHHHHTT-CSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHH
T ss_pred ecCcCHHHHHHHHHcC-CCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHH
Confidence 3566888888888887 677765 3211111111 1 111 111122257888877 34 6999999
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc---CccEEEEeccCCCCCCcHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIGIDDINSYDFVRDFVG 157 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g~~~~~~~~~~~~~a~ 157 (956)
.++.+.++|+.+|.|--... ++.+..-.|..|. ..+...+-+++.+++. +.++.|--|........++++++=++
T Consensus 108 ~v~~l~~aGaagv~iEDq~~-~k~cgh~~gk~l~-~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ 185 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQIL-TKRCGHLSGKKVV-SRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLR 185 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCC-CC--------CBC-CHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCC-CcccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHH
Confidence 99999999999999965532 2222222233444 4444344445554432 56666666653211123567888899
Q ss_pred HHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe---cC---CCCHHHHHHHhhhcCEEEE
Q psy2378 158 TVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG---IKTKKEIDLHLNYIDGVML 231 (956)
Q Consensus 158 ~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n---Gg---I~s~~da~~~l~~ad~Vmi 231 (956)
...++|+|.|-+++.+ +.+.++++.+.++++||.+| |+ ..+.++..++ .+..|..
T Consensus 186 ay~eAGAD~ifi~~~~-----------------~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~l--Gv~~v~~ 246 (307)
T 3lye_A 186 AARDEGADVGLLEGFR-----------------SKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAM--GFRIMIF 246 (307)
T ss_dssp HHHHTTCSEEEECCCS-----------------CHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHH--TCSEEEE
T ss_pred HHHHCCCCEEEecCCC-----------------CHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHc--CCeEEEE
Confidence 9999999999998643 56778888888744888765 33 2344433332 2888877
Q ss_pred cccccc
Q psy2378 232 GREAYK 237 (956)
Q Consensus 232 GR~~l~ 237 (956)
+-.++.
T Consensus 247 ~~~~~r 252 (307)
T 3lye_A 247 SFATLA 252 (307)
T ss_dssp ETTTHH
T ss_pred ChHHHH
Confidence 765553
No 276
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.49 E-value=0.0092 Score=64.15 Aligned_cols=194 Identities=15% Similarity=0.126 Sum_probs=117.8
Q ss_pred CcCCHHHHHHHHHcCCCcEEEecccccc-cccCC-------chhccc----c-CCCCCCEEEEec-C-CCHHHHHHHHHH
Q psy2378 20 NLTDRHCRMFHRQITRYSWLYTEMFTTQ-AILGN-------KKHCLD----F-NAEEHPIAFQVG-D-NEPKKLAKSAKI 84 (956)
Q Consensus 20 ~~td~~fR~~~~~~g~~~l~~tem~~~~-~l~~~-------~~~~~~----~-~~~~~p~~vQl~-g-~~~~~~~~aA~~ 84 (956)
+.=|..+-+++.+.| ++.+++.-.+.- ...|. ...++. + ...+.|+++=+= | .+|++..+.++.
T Consensus 28 ~a~D~~sA~l~e~aG-f~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~ 106 (298)
T 3eoo_A 28 GAITAYAAKMAEAVG-FKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRS 106 (298)
T ss_dssp ECSSHHHHHHHHHHT-CSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcC-CCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHH
Confidence 556788888887887 666666531111 11121 111110 0 123578887772 2 389999999999
Q ss_pred HHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc-cCccEEEEeccCCCCCCcHHHHHHHHHHHHHcC
Q psy2378 85 IQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAG 163 (956)
Q Consensus 85 ~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G 163 (956)
+.++|+.+|.|--+.. ++.+..--|..|....+.+..| ++.+++ .+.++.|--|..-.....++++++=+++..++|
T Consensus 107 l~~aGaagv~iEDq~~-~k~cGh~~gk~l~~~~e~~~ri-~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AG 184 (298)
T 3eoo_A 107 FIKAGVGAVHLEDQVG-QKRCGHRPGKECVPAGEMVDRI-KAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAG 184 (298)
T ss_dssp HHHTTCSEEEEECBCC-CCCTTCCCCCCBCCHHHHHHHH-HHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCeEEEECCCCC-CcccCCCCCCeecCHHHHHHHH-HHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcC
Confidence 9999999999965431 2222222234444434445444 444433 356666666653221223466888889999999
Q ss_pred CCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe---cC---CCCHHHHHHHhhh-cCEEEEccccc
Q psy2378 164 CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG---IKTKKEIDLHLNY-IDGVMLGREAY 236 (956)
Q Consensus 164 ~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n---Gg---I~s~~da~~~l~~-ad~VmiGR~~l 236 (956)
+|.|-+++.+ +.+.++++.+.+ ++||.+| |+ ..+.+ ++-+- ...|.+|-.++
T Consensus 185 AD~if~~~~~-----------------~~ee~~~~~~~~-~~Pl~~n~~~~g~tp~~~~~---eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 185 ADMIFPEAMK-----------------TLDDYRRFKEAV-KVPILANLTEFGSTPLFTLD---ELKGANVDIALYCCGAY 243 (298)
T ss_dssp CSEEEECCCC-----------------SHHHHHHHHHHH-CSCBEEECCTTSSSCCCCHH---HHHHTTCCEEEECSHHH
T ss_pred CCEEEeCCCC-----------------CHHHHHHHHHHc-CCCeEEEeccCCCCCCCCHH---HHHHcCCeEEEEchHHH
Confidence 9999998753 677889999888 5999876 32 23333 33333 88888876654
Q ss_pred c
Q psy2378 237 K 237 (956)
Q Consensus 237 ~ 237 (956)
.
T Consensus 244 r 244 (298)
T 3eoo_A 244 R 244 (298)
T ss_dssp H
T ss_pred H
Confidence 4
No 277
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.47 E-value=0.042 Score=58.20 Aligned_cols=153 Identities=10% Similarity=0.148 Sum_probs=91.2
Q ss_pred cCcCCHHHHHHHHHcCCCcEEEecccccccccCC-------chhcccc-----CCCCCCEEE-Ee-cCC---CHHHHHH-
Q psy2378 19 MNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGN-------KKHCLDF-----NAEEHPIAF-QV-GDN---EPKKLAK- 80 (956)
Q Consensus 19 ~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~-------~~~~~~~-----~~~~~p~~v-Ql-~g~---~~~~~~~- 80 (956)
.+.=|.++.+++.+.| +|.+.+.--......|. ..+++.. ...+.|+++ =+ ||+ ++++..+
T Consensus 39 ~tayDa~sA~l~e~aG-~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 117 (281)
T 1oy0_A 39 LTAYDYSTARIFDEAG-IPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAA 117 (281)
T ss_dssp EECCSHHHHHHHHTTT-CCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHH
T ss_pred EeCcCHHHHHHHHHcC-CCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHH
Confidence 3445777777777776 67777652111111121 1111111 113445554 33 233 6887666
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc---------CC----CCCC
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI---------GI----DDIN 147 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---------g~----~~~~ 147 (956)
+.+.++++|+++|.|--| ....+.|++++++ ++||..-+.+ |+ ...
T Consensus 118 a~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~grt~- 176 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQGRGD- 176 (281)
T ss_dssp HHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC--------------CH-
T ss_pred HHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEEeCcH-
Confidence 555566799999999643 1234556666554 7888733222 11 111
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 148 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
..+++++=|++++++|+++|.+.+-. -+.+++|.+.+ ++|+|+-|.
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 222 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEMVP------------------AELATQITGKL-TIPTVGIGA 222 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeCC
Confidence 23568888999999999999997621 25678999998 799998663
No 278
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=96.43 E-value=0.032 Score=59.71 Aligned_cols=191 Identities=8% Similarity=0.051 Sum_probs=118.7
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEec-c-ccc--cccc--C--Cchhccc----c-CCCCCCEEEEe---cCCCHHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTE-M-FTT--QAIL--G--NKKHCLD----F-NAEEHPIAFQV---GDNEPKKLAKS 81 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~te-m-~~~--~~l~--~--~~~~~~~----~-~~~~~p~~vQl---~g~~~~~~~~a 81 (956)
|.+.=|..+-+++.+.| ++.+++. . ++. .+.. + ....++. + ...+.|+++=+ +| +|++..+.
T Consensus 25 ~~~a~D~~sA~i~e~aG-f~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~~~~~ 102 (287)
T 3b8i_A 25 TASVFDPMSARIAADLG-FECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRT 102 (287)
T ss_dssp CEECCSHHHHHHHHHTT-CSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS-SHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHH
Confidence 45566888888888887 5666655 3 221 1221 0 1111111 0 22356887766 35 89999999
Q ss_pred HHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHHH
Q psy2378 82 AKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVS 160 (956)
Q Consensus 82 A~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l~ 160 (956)
++++.++|+++|.|--+.. +|.+...-| . +-..+...+-|++++++- +.++.|--|..- ....++++++=+++++
T Consensus 103 v~~l~~aGa~gv~iED~~~-pKrcgh~~g-k-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~Ra~ay~ 178 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLL-PAQFGRKST-D-LICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVIQRTLAYQ 178 (287)
T ss_dssp HHHHHHHTCSEEEEECBCC-SCCTTTCTT-C-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEcCCCC-ccccCCCCC-C-ccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHHHHHHHHH
Confidence 9999999999999976642 333323233 4 556666666777776653 334444444422 2233567888999999
Q ss_pred HcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe-cC---CCCHHHHHHHhhhcCEEEEccc
Q psy2378 161 SAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN-GG---IKTKKEIDLHLNYIDGVMLGRE 234 (956)
Q Consensus 161 ~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n-Gg---I~s~~da~~~l~~ad~VmiGR~ 234 (956)
++|+|.|.+++- .+.+.++++.+.+ ++|++.. |+ ..+.++..++ ....|..|-.
T Consensus 179 eAGAd~i~~e~~-----------------~~~~~~~~i~~~~-~~P~ii~~~g~~~~~~~~eL~~l--Gv~~v~~~~~ 236 (287)
T 3b8i_A 179 EAGADGICLVGV-----------------RDFAHLEAIAEHL-HIPLMLVTYGNPQLRDDARLARL--GVRVVVNGHA 236 (287)
T ss_dssp HTTCSEEEEECC-----------------CSHHHHHHHHTTC-CSCEEEECTTCGGGCCHHHHHHT--TEEEEECCCH
T ss_pred HcCCCEEEecCC-----------------CCHHHHHHHHHhC-CCCEEEeCCCCCCCCCHHHHHHc--CCcEEEEChH
Confidence 999999999863 2567889999988 6998832 22 3444433332 1666666543
No 279
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.42 E-value=0.053 Score=57.73 Aligned_cols=186 Identities=12% Similarity=0.084 Sum_probs=121.5
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEec-c-cccccccCC-------chhcccc-----CCCCCCEEEEe---cCCCHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTE-M-FTTQAILGN-------KKHCLDF-----NAEEHPIAFQV---GDNEPKKLAK 80 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~te-m-~~~~~l~~~-------~~~~~~~-----~~~~~p~~vQl---~g~~~~~~~~ 80 (956)
|.+.=|..+-+++.+.| ++.+++. . ++. . .|. ...++.. ...+.|+++=+ +|.+|++..+
T Consensus 20 ~~~a~D~~sA~~~~~aG-~~ai~vsg~s~a~-~-~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~ 96 (275)
T 2ze3_A 20 LPNAWDVASARLLEAAG-FTAIGTTSAGIAH-A-RGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRR 96 (275)
T ss_dssp ECEESSHHHHHHHHHHT-CSCEEECHHHHHH-H-SCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHH
T ss_pred EecccCHHHHHHHHHcC-CCEEEECcHHHHH-h-CCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHH
Confidence 44566888888888887 6777766 2 322 1 221 1111110 11236888877 4578999999
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc---CccEEEEeccCCCCC-------CcHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIGIDDI-------NSYD 150 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g~~~~-------~~~~ 150 (956)
.++++.++|+.+|.|--+... -|.. +-..+...+-|++++++. ++|+.|--|..-... ...+
T Consensus 97 ~v~~l~~aGaagv~iED~~~~-------~~k~-l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~ 168 (275)
T 2ze3_A 97 TVEHFAALGVAGVNLEDATGL-------TPTE-LYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLA 168 (275)
T ss_dssp HHHHHHHTTCSEEEEECBCSS-------SSSC-BCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCcCC-------CCCc-cCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHH
Confidence 999999999999999765431 1333 345666667777777663 688777667632110 1356
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec--CCCCHHHHHHHhhh-cC
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING--GIKTKKEIDLHLNY-ID 227 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG--gI~s~~da~~~l~~-ad 227 (956)
++++=++.++++|+|.|-+++.. +.+.++++.+.+ ++|+-.++ ...+.+ ++-+- ..
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~~-----------------~~~~~~~i~~~~-~~P~n~~~~~~~~~~~---eL~~lGv~ 227 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIFVPLAL-----------------QSQDIRALADAL-RVPLNVMAFPGSPVPR---ALLDAGAA 227 (275)
T ss_dssp HHHHHHHHHHHTTCSEEECTTCC-----------------CHHHHHHHHHHC-SSCEEEECCTTSCCHH---HHHHTTCS
T ss_pred HHHHHHHHHHHCCCCEEEECCCC-----------------CHHHHHHHHHhc-CCCEEEecCCCCCCHH---HHHHcCCc
Confidence 78888999999999999998742 567889999998 69986664 344443 33332 77
Q ss_pred EEEEcccc
Q psy2378 228 GVMLGREA 235 (956)
Q Consensus 228 ~VmiGR~~ 235 (956)
.|.+|-.+
T Consensus 228 ~v~~~~~~ 235 (275)
T 2ze3_A 228 RVSFGQSL 235 (275)
T ss_dssp EEECTTHH
T ss_pred EEEEChHH
Confidence 77766443
No 280
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.40 E-value=0.03 Score=60.73 Aligned_cols=195 Identities=12% Similarity=0.054 Sum_probs=119.5
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEecc--ccccccc-CC-----chhcc------ccCCCCCCEEEEe---cCCCHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTEM--FTTQAIL-GN-----KKHCL------DFNAEEHPIAFQV---GDNEPKKLAK 80 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~tem--~~~~~l~-~~-----~~~~~------~~~~~~~p~~vQl---~g~~~~~~~~ 80 (956)
|.+.=|..+-+++.+.| ++.+++.- ++...+- .+ ...++ .....+.|+++=+ +| +|++..+
T Consensus 43 ~~~ayD~~sA~i~e~aG-fdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~v~~ 120 (318)
T 1zlp_A 43 MPGVQDALSAAVVEKTG-FHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLNVQR 120 (318)
T ss_dssp EEEECSHHHHHHHHHTT-CSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHHHHH
Confidence 34556778888888887 67777664 2211111 11 11111 1111268888877 45 8999999
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTV 159 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~~~~a~~l 159 (956)
.++++.++|+.+|-|--+.. ++++..-.|..|. ..+...+-|++++++. +.++.|--|..-.....++++++=++++
T Consensus 121 tv~~l~~aGaagv~iED~~~-~k~cgH~~gk~L~-p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay 198 (318)
T 1zlp_A 121 FIRELISAGAKGVFLEDQVW-PKKCGHMRGKAVV-PAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLY 198 (318)
T ss_dssp HHHHHHHTTCCEEEEECBCS-SCCCSSSSCCCBC-CHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCC-CccccCCCCCccC-CHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHH
Confidence 99999999999999976542 2333332233343 4444455556665553 3445444454211111235678889999
Q ss_pred HHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe---c---CCCCHHHHHHHhhhcCEEEEcc
Q psy2378 160 SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---G---GIKTKKEIDLHLNYIDGVMLGR 233 (956)
Q Consensus 160 ~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n---G---gI~s~~da~~~l~~ad~VmiGR 233 (956)
+++|+|.|-+++- .+.+.++++.+.+ ++|+.+| | ...+.++..++ ....|.+|-
T Consensus 199 ~eAGAd~i~~e~~-----------------~~~e~~~~i~~~l-~~P~lan~~~~g~~~~~~~~eL~~l--Gv~~v~~~~ 258 (318)
T 1zlp_A 199 KEAGADATFVEAP-----------------ANVDELKEVSAKT-KGLRIANMIEGGKTPLHTPEEFKEM--GFHLIAHSL 258 (318)
T ss_dssp HHTTCSEEEECCC-----------------CSHHHHHHHHHHS-CSEEEEEECTTSSSCCCCHHHHHHH--TCCEEEECS
T ss_pred HHcCCCEEEEcCC-----------------CCHHHHHHHHHhc-CCCEEEEeccCCCCCCCCHHHHHHc--CCeEEEEch
Confidence 9999999999864 2667889999998 6999766 2 23444433332 288888876
Q ss_pred ccc
Q psy2378 234 EAY 236 (956)
Q Consensus 234 ~~l 236 (956)
.++
T Consensus 259 ~~~ 261 (318)
T 1zlp_A 259 TAV 261 (318)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 281
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.39 E-value=0.046 Score=58.83 Aligned_cols=196 Identities=12% Similarity=0.119 Sum_probs=115.4
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEec-c-ccccccc-CC-----chhcccc-----CCCCCCEEEEec-C-CCHHHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTE-M-FTTQAIL-GN-----KKHCLDF-----NAEEHPIAFQVG-D-NEPKKLAKSA 82 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~te-m-~~~~~l~-~~-----~~~~~~~-----~~~~~p~~vQl~-g-~~~~~~~~aA 82 (956)
|.+.=|..+-+++.+.| ++.+++. . ++. .+- .+ ...++.. ...+.|+++=+= | .++++..+.+
T Consensus 23 ~~~a~D~~sA~~~~~aG-~~ai~vsg~~~a~-~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v 100 (295)
T 1s2w_A 23 IMEAHNGLSARIVQEAG-FKGIWGSGLSVSA-QLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLV 100 (295)
T ss_dssp EEEECSHHHHHHHHHHT-CSCEEECCHHHHH-TC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEeChHHHHH-hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHH
Confidence 44566888888888887 6777666 2 332 221 11 1111110 123578887772 2 3688899999
Q ss_pred HHHHHcCCCEEEecCCCCcceeeeCccc--ccccCChHHHHHHHHHHhhcc-CccEEEEeccCCC-CCCcHHHHHHHHHH
Q psy2378 83 KIIQKWGYDEINLNCGCPSNRVQNGFFG--AILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGID-DINSYDFVRDFVGT 158 (956)
Q Consensus 83 ~~~~~~G~d~IeiN~gCP~~~~~~~~~G--~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~-~~~~~~~~~~~a~~ 158 (956)
+++.++|+.+|-|--+.. ++++..-.| ..|. ..+...+-|++++++- +.++.|--|..-. .....+++++=+++
T Consensus 101 ~~l~~aGaagv~iED~~~-~k~cgH~gg~~k~l~-p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~a 178 (295)
T 1s2w_A 101 RKLEDRGVAGACLEDKLF-PKTNSLHDGRAQPLA-DIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEA 178 (295)
T ss_dssp HHHHHTTCCEEEEECBCC---------CTTCCBC-CHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCC-CccccccCCCCCccc-CHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHH
Confidence 999999999999976642 233322111 2333 3444444455555443 4445554454222 12235678888999
Q ss_pred HHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecC---CCCHHHHHHHhhh-cCEEEEcc
Q psy2378 159 VSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGG---IKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 159 l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGg---I~s~~da~~~l~~-ad~VmiGR 233 (956)
++++|+|.|-++++. .+.+.++++.+.++ .+|+++|-. -.+ ..++-+- ...|.+|-
T Consensus 179 y~eAGAd~i~~e~~~----------------~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~---~~eL~~lGv~~v~~~~ 239 (295)
T 1s2w_A 179 YRNAGADAILMHSKK----------------ADPSDIEAFMKAWNNQGPVVIVPTKYYKTP---TDHFRDMGVSMVIWAN 239 (295)
T ss_dssp HHHTTCSEEEECCCS----------------SSSHHHHHHHHHHTTCSCEEECCSTTTTSC---HHHHHHHTCCEEEECS
T ss_pred HHHcCCCEEEEcCCC----------------CCHHHHHHHHHHcCCCCCEEEeCCCCCCCC---HHHHHHcCCcEEEECh
Confidence 999999999998643 24567788888762 299999843 334 3333333 88888876
Q ss_pred ccc
Q psy2378 234 EAY 236 (956)
Q Consensus 234 ~~l 236 (956)
.++
T Consensus 240 ~~~ 242 (295)
T 1s2w_A 240 HNL 242 (295)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 282
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.37 E-value=0.017 Score=59.30 Aligned_cols=137 Identities=11% Similarity=0.112 Sum_probs=82.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEec-------------cCCCCC
Q psy2378 80 KSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR-------------IGIDDI 146 (956)
Q Consensus 80 ~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir-------------~g~~~~ 146 (956)
+.++.+.+.|++.|++-. + . .+++.+.++++.+.+..+.++.|--+ ++.++.
T Consensus 17 ~~~~~a~~~Gv~~v~lr~--k-------~------~~~~~~~~~i~~l~~~~~~~livnd~~~~A~~~gadgvhl~~~~~ 81 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRK--P-------E------TPAMYSERLLTLIPEKYHRRIVTHEHFYLKEEFNLMGIHLNARNP 81 (210)
T ss_dssp HHHHHHHHTTCCEEEECC--S-------S------CCHHHHHHHHHHSCGGGGGGEEESSCTTHHHHTTCSEEECCSSSC
T ss_pred HHHHHHHHCCCCEEEEcc--C-------C------CCHHHHHHHHHHHHHHhCCeEEEeCCHHHHHHcCCCEEEECcccc
Confidence 556667788999999963 1 0 13445556667776666667665211 011110
Q ss_pred C-----------cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCC
Q psy2378 147 N-----------SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIK 214 (956)
Q Consensus 147 ~-----------~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~ 214 (956)
. +..+..+ +..++ .|+|+|.+.+=.. ++....+.++.+|+.++++++.+ +++||++.|||+
T Consensus 82 ~~~~~~~~~ig~s~~t~~e-~~~A~-~GaDyv~~g~vf~-----t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~ 154 (210)
T 3ceu_A 82 SEPHDYAGHVSCSCHSVEE-VKNRK-HFYDYVFMSPIYD-----SISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN 154 (210)
T ss_dssp SCCTTCCSEEEEEECSHHH-HHTTG-GGSSEEEECCCC--------------CCCCHHHHHHHHHTTCSSTTEEEESSCC
T ss_pred ccccccCCEEEEecCCHHH-HHHHh-hCCCEEEECCcCC-----CCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC
Confidence 0 0001222 33334 7888887643210 00001122357899999998873 379999999997
Q ss_pred CHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 215 TKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 215 s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
++.+.++++. ++||.+++++...+
T Consensus 155 -~~nv~~~~~~Ga~gVav~s~i~~~~ 179 (210)
T 3ceu_A 155 -EDNLLEIKDFGFGGAVVLGDLWNKF 179 (210)
T ss_dssp -TTTHHHHHHTTCSEEEESHHHHTTC
T ss_pred -HHHHHHHHHhCCCEEEEhHHhHcCC
Confidence 8999999988 99999999987643
No 283
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=96.36 E-value=0.011 Score=66.89 Aligned_cols=132 Identities=11% Similarity=-0.016 Sum_probs=95.1
Q ss_pred HHHHHHHHHcCCCEEEecCCCCcceeeeCcccccc-cCChHHHHHHHHHHhhccC--ccEEEEeccCCCCCCcHHHHHHH
Q psy2378 79 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDF 155 (956)
Q Consensus 79 ~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l-~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~~~~~ 155 (956)
.+.|+.+.+.||..+-+..|-|... ...++.+ ..+++...+.+++||++++ .++.+..-.+|+ .++++++
T Consensus 157 ~~~a~~~~~~G~~~~Kik~g~~~~~---~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~----~~~A~~~ 229 (400)
T 4dxk_A 157 DELAHSLLEDGITAMKIWPFDAAAE---KTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQ----LLPAMQI 229 (400)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHH---HHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBC----HHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCcccc---ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCC----HHHHHHH
Confidence 3445566788999999876522100 0001111 1246778899999999984 667776655665 3568899
Q ss_pred HHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEEEcc
Q psy2378 156 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGR 233 (956)
Q Consensus 156 a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR 233 (956)
++.|++.|+++|.-- .++.+++..+++++.+ ++||++.+.+.++++++++++. +|.|.+==
T Consensus 230 ~~~L~~~~i~~iEeP----------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~ 292 (400)
T 4dxk_A 230 AKALTPYQTFWHEDP----------------IKMDSLSSLTRYAAVS-PAPISASETLGSRWAFRDLLETGAAGVVMLDI 292 (400)
T ss_dssp HHHTGGGCCSEEECC----------------BCTTSGGGHHHHHHHC-SSCEEECTTCCHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHhhcCCCEEEcC----------------CCcccHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999998520 1234778889999988 7999999999999999999987 99998743
Q ss_pred c
Q psy2378 234 E 234 (956)
Q Consensus 234 ~ 234 (956)
+
T Consensus 293 ~ 293 (400)
T 4dxk_A 293 S 293 (400)
T ss_dssp T
T ss_pred c
Confidence 3
No 284
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.33 E-value=0.035 Score=57.23 Aligned_cols=136 Identities=12% Similarity=0.103 Sum_probs=82.8
Q ss_pred HHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHc
Q psy2378 83 KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSA 162 (956)
Q Consensus 83 ~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~ 162 (956)
..++++|+|+|=|... ..+ . ..+.+.+.++..++. ++.+.+=+.. . .+ .+++.+.
T Consensus 76 ~~~~~~Gad~Vll~~s----er~-l--------~~~e~~~~~~~a~~~-Gl~~iv~v~~--~--------~e-~~~~~~~ 130 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHS----EKR-M--------LLADIEAVINKCKNL-GLETIVCTNN--I--------NT-SKAVAAL 130 (219)
T ss_dssp HHHHHHTCCEEEESBT----TBC-C--------BHHHHHHHHHHHHHH-TCEEEEEESS--S--------HH-HHHHTTT
T ss_pred HHHHHcCCCEEEECCc----ccc-C--------CHHHHHHHHHHHHHC-CCeEEEEeCC--c--------hH-HHHHHhC
Confidence 5677899999999432 000 0 122356677776654 6655554432 1 11 2455667
Q ss_pred CCCEEEEcccccccccCCCCC-CCCCCcCcHH-HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 163 GCRTFIVHARNAFLKKLNPKQ-NRKIPILKYN-FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 163 G~~~i~vh~r~~~~~g~~~~~-~~~~~~~~~~-~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
|.+.|.++.++. .| +|.. .... +.+.+ ....+++...++||++-|||+++++++.+... +|+|.+|++++.-+
T Consensus 131 ~~~~i~~~~~~~--iG-tG~~~~t~~-~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~ 206 (219)
T 2h6r_A 131 SPDCIAVEPPEL--IG-TGIPVSKAN-PEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAK 206 (219)
T ss_dssp CCSEEEECCCC------------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCS
T ss_pred CCCEEEEEeccc--cc-cCCCCccCC-HHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcc
Confidence 899999998762 23 3310 1111 11233 33444444336999999999999999998887 99999999999877
Q ss_pred cchHHHHH
Q psy2378 240 FLMSNFDL 247 (956)
Q Consensus 240 ~l~~~i~~ 247 (956)
+....+++
T Consensus 207 d~~~~~~~ 214 (219)
T 2h6r_A 207 NVEEAIRE 214 (219)
T ss_dssp SHHHHHHH
T ss_pred cHHHHHHH
Confidence 76555543
No 285
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.32 E-value=0.1 Score=55.65 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=77.3
Q ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEE
Q psy2378 59 FNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITV 137 (956)
Q Consensus 59 ~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~v 137 (956)
+......+.+.|.+.+.+++...++.+...|+|.||+=. |-+.. ..+.+.+.+.++.+|+.. ++|+.+
T Consensus 35 ~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRv---------D~l~~--~~~~~~v~~~l~~lr~~~~~~PiI~ 103 (276)
T 3o1n_A 35 VGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRV---------DHFAN--VTTAESVLEAAGAIREIITDKPLLF 103 (276)
T ss_dssp ETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEG---------GGCTT--TTCHHHHHHHHHHHHHHCCSSCEEE
T ss_pred eCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEe---------ccccc--cCcHHHHHHHHHHHHHhcCCCCEEE
Confidence 333334478999999999999999999888999999933 32221 123478899999999987 899999
Q ss_pred EeccCCCCCC---cHHHHHHHHHHHHHcC-CCEEEEccc
Q psy2378 138 KHRIGIDDIN---SYDFVRDFVGTVSSAG-CRTFIVHAR 172 (956)
Q Consensus 138 Kir~g~~~~~---~~~~~~~~a~~l~~~G-~~~i~vh~r 172 (956)
=+|..++.+. +.++..++.+.+.+.| +++|.|.-.
T Consensus 104 T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~ 142 (276)
T 3o1n_A 104 TFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELF 142 (276)
T ss_dssp ECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGG
T ss_pred EEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECc
Confidence 9998544321 2345677888888889 999999754
No 286
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.28 E-value=0.0042 Score=73.32 Aligned_cols=83 Identities=14% Similarity=0.120 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCH-----------HH
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-----------KE 218 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~-----------~d 218 (956)
.+..++|+.+++.|++.|++---+....+ ....+.+.+.++++++.+ ++||+..|||.+. ++
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~------~~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~~~d~~~~~~~~~~~ 352 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDC------PLKDTPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEV 352 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CC------CGGGCHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccc------cCCCchHHHHHHHHHhhC-CCcEEEeCccccchhcccccchHHHH
Confidence 35789999999999999988533211111 111234688899998887 7999999999998 55
Q ss_pred HHHHhhh-cCEEEEccccccCC
Q psy2378 219 IDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 219 a~~~l~~-ad~VmiGR~~l~~P 239 (956)
++++++. ||.|.||.+++.||
T Consensus 353 a~~~l~aGad~V~igt~~~~~~ 374 (555)
T 1jvn_A 353 ASLYFRSGADKVSIGTDAVYAA 374 (555)
T ss_dssp HHHHHHHTCSEEEECHHHHHHH
T ss_pred HHHHHHcCCCEEEECCHHhhCc
Confidence 9999988 99999999998753
No 287
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.26 E-value=0.012 Score=61.38 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=98.9
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEE--EecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEI--NLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~I--eiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
.+..+|...|...+.+..+.+.+.|+|.+ |+-=|.=++|. .+| .++++++|+.++. .+++=..
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~---t~G----------~~~v~~lr~~~~~--DvhLMv~ 79 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLF---TVG----------AIGIKYFPTHCFK--DVHLMVR 79 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB---CBC----------THHHHTSCTTSEE--EEEEECS
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccch---hhh----------HHHHHHHhhhCCC--CeEEEEE
Confidence 48899999999999999999999999985 55333311222 223 2577888877653 5554321
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEccccc-----------cc------------cc--CCCCCC--C---CC-----
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNA-----------FL------------KK--LNPKQN--R---KI----- 187 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~-----------~~------------~g--~~~~~~--~---~~----- 187 (956)
+ ...+++.+.++|+|.+++|.-.. .. -| +.|... . +.
T Consensus 80 --~------p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~ 151 (237)
T 3cu2_A 80 --N------QLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDV 151 (237)
T ss_dssp --C------HHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSE
T ss_pred --C------HHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCce
Confidence 1 23677888899999999985321 01 01 111100 0 00
Q ss_pred ---------------CcCcHHHHHHHHHhCC----CceEEEecCCCCHHHHHHHhh--h-cCEEEEccccccC
Q psy2378 188 ---------------PILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLN--Y-IDGVMLGREAYKN 238 (956)
Q Consensus 188 ---------------~~~~~~~i~~v~~~~~----~ipVi~nGgI~s~~da~~~l~--~-ad~VmiGR~~l~~ 238 (956)
.+..++.++++++... ++||.+-|||+ .+.+.++.+ . ||++.+|++++..
T Consensus 152 vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 152 IQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred eeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 0112355667776542 48999999995 899999999 7 9999999999975
No 288
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.18 E-value=0.058 Score=55.59 Aligned_cols=181 Identities=10% Similarity=0.028 Sum_probs=107.1
Q ss_pred EccCcCcCCHHHHHHH---HHcCCCcEEEecccccccccCCchhccccCCCCCCEEEEe---cCC-CHHHHHHHHHHHHH
Q psy2378 15 IAPMMNLTDRHCRMFH---RQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQV---GDN-EPKKLAKSAKIIQK 87 (956)
Q Consensus 15 lAPM~~~td~~fR~~~---~~~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl---~g~-~~~~~~~aA~~~~~ 87 (956)
|.|.. |....+.+| +.+|-..+|+.+-.... . .+.+. . -++..-+ +|. ..+.-+.-++. .+
T Consensus 10 L~p~~--t~~~i~~l~~~A~~~~~~aVcv~p~~v~~-a----~~~l~---g-v~v~tvigFP~G~~~~~~k~~E~~~-i~ 77 (226)
T 1vcv_A 10 LKPYL--TVDEAVAGARKAEELGVAAYCVNPIYAPV-V----RPLLR---K-VKLCVVADFPFGALPTASRIALVSR-LA 77 (226)
T ss_dssp CCTTC--CHHHHHHHHHHHHHHTCSEEEECGGGHHH-H----GGGCS---S-SEEEEEESTTTCCSCHHHHHHHHHH-HT
T ss_pred CCCCC--CHHHHHHHHHHHHHhCCCEEEECHHHHHH-H----HHHhC---C-CeEEEEeCCCCCCCchHHHHHHHHH-HH
Confidence 45655 566777766 56774445544422111 0 11111 0 2222222 233 33434444555 77
Q ss_pred cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE--eccCCCCCCcHHHHHHHHHHHHHcCCC
Q psy2378 88 WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK--HRIGIDDINSYDFVRDFVGTVSSAGCR 165 (956)
Q Consensus 88 ~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK--ir~g~~~~~~~~~~~~~a~~l~~~G~~ 165 (956)
.|+|.||+-+ .+|.....+.+.+.+=++++++.++- ..+| +-.+.-. .++....++...++|+|
T Consensus 78 ~GAdEID~Vi----------nig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt---~eei~~a~~ia~eaGAD 143 (226)
T 1vcv_A 78 EVADEIDVVA----------PIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLR---DEERYTLYDIIAEAGAH 143 (226)
T ss_dssp TTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCC---HHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEec----------chhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCC---HHHHHHHHHHHHHcCCC
Confidence 8999999853 25555556888899999999998842 2445 4443332 34678889999999999
Q ss_pred EEEEcccccccccCCC----CCCCCCCcCcHHHHHHHHHh---C-CCceEEEecCCCCHHHHHHHhhhcC
Q psy2378 166 TFIVHARNAFLKKLNP----KQNRKIPILKYNFVYNLKKD---F-PELEIIINGGIKTKKEIDLHLNYID 227 (956)
Q Consensus 166 ~i~vh~r~~~~~g~~~----~~~~~~~~~~~~~i~~v~~~---~-~~ipVi~nGgI~s~~da~~~l~~ad 227 (956)
+|-.+.+. ++ .+....+.+..+.++-+++. + +++||-++|||.|.+++.++++.++
T Consensus 144 fVKTSTGf------~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~ 207 (226)
T 1vcv_A 144 FIKSSTGF------AEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIG 207 (226)
T ss_dssp EEECCCSC------CCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHC
T ss_pred EEEeCCCC------CccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 99776432 10 00001123444444444443 4 3599999999999999999998654
No 289
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.10 E-value=0.07 Score=55.53 Aligned_cols=122 Identities=13% Similarity=0.155 Sum_probs=87.2
Q ss_pred HcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCE
Q psy2378 87 KWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRT 166 (956)
Q Consensus 87 ~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~ 166 (956)
.+|+|+|=|-+.| -+++.+.++++..++ .|..+-|-+.. ..++ ++..+.|++.
T Consensus 124 ~~GADaILLI~a~---------------L~~~~l~~l~~~A~~-lGl~~LvEVh~----------~~El-~rAl~~~a~i 176 (258)
T 4a29_A 124 NLGADTVLLIVKI---------------LTERELESLLEYARS-YGMEPLILIND----------ENDL-DIALRIGARF 176 (258)
T ss_dssp HHTCSEEEEEGGG---------------SCHHHHHHHHHHHHH-TTCCCEEEESS----------HHHH-HHHHHTTCSE
T ss_pred HcCCCeeehHHhh---------------cCHHHHHHHHHHHHH-HhHHHHHhcch----------HHHH-HHHhcCCCcE
Confidence 3577777665433 245566777666654 57666665432 1233 3445689999
Q ss_pred EEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHH
Q psy2378 167 FIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 167 i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~ 244 (956)
|-|-.|.- .- -..|++...++.+.+| ++.+|+-+||.+++|+.++... +|+|.||.+++.+|+-.++
T Consensus 177 IGINNRnL--~t---------f~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~~~~ 245 (258)
T 4a29_A 177 IGIMSRDF--ET---------GEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKIKE 245 (258)
T ss_dssp EEECSBCT--TT---------CCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTHHHH
T ss_pred EEEeCCCc--cc---------cccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcHHHH
Confidence 99988861 11 1368888889988876 5889999999999999999888 9999999999999985444
Q ss_pred HH
Q psy2378 245 FD 246 (956)
Q Consensus 245 i~ 246 (956)
+.
T Consensus 246 Li 247 (258)
T 4a29_A 246 LI 247 (258)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 290
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.09 E-value=0.043 Score=57.62 Aligned_cols=155 Identities=8% Similarity=0.117 Sum_probs=98.2
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEecccccccccCC-------chhcccc-----CCCCC-CEEEEec-CC--CHHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGN-------KKHCLDF-----NAEEH-PIAFQVG-DN--EPKKLAKS 81 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~-------~~~~~~~-----~~~~~-p~~vQl~-g~--~~~~~~~a 81 (956)
|.+.=|.++.+++.+.| +|.+++.--......|. ..+++.. ...+. ++++=+- |+ +|++..+.
T Consensus 21 ~~tayD~~sA~l~e~aG-~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 21 TITAYDYSFAKLFADEG-LNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp EEECCSHHHHHHHHHHT-CCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcC-CCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 44556999999999998 78888862111111121 1122211 11233 4555543 21 78888888
Q ss_pred HHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc---------CC----CCCCc
Q psy2378 82 AKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI---------GI----DDINS 148 (956)
Q Consensus 82 A~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---------g~----~~~~~ 148 (956)
|.++.++|+++|.|--| +...+.|++++++ ++||.--+.+ |+ .....
T Consensus 100 a~rl~kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~ 159 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEA 159 (264)
T ss_dssp HHHHHHTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHHH
T ss_pred HHHHHHcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHHH
Confidence 88887799999999643 1345556666654 8998744322 11 11112
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.+++++=|++++++|+++|.+.+-. -+.+++|.+.+ ++|+|+-|.
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 204 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLECVP------------------VELAKRITEAL-AIPVIGIGA 204 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred HHHHHHHHHHHHHCCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeCC
Confidence 3567888999999999999997631 25678899988 799998663
No 291
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=95.97 E-value=0.021 Score=64.43 Aligned_cols=140 Identities=9% Similarity=0.029 Sum_probs=95.4
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 144 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 144 (956)
|+...+...+|+++++.|+.+.+.||..|-+..|.+.+.. .....++.-.+.+++||++++ . +++++...
T Consensus 156 ~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~-d--~~L~vDaN 225 (393)
T 3u9i_A 156 ETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAP-T--ARLILDGN 225 (393)
T ss_dssp ECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHST-T--SEEEEECC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCC-C--CeEEEEcc
Confidence 3345566788999999999888899999999877542110 011225666778899998874 2 24444222
Q ss_pred CCCcHHHHHHHHHHH--HHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 145 DINSYDFVRDFVGTV--SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 145 ~~~~~~~~~~~a~~l--~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
..-+.++++++++.| ++.++.+|. +. .++.+++..+++++.. ++||.+.=.+.+..++.++
T Consensus 226 ~~w~~~~A~~~~~~L~~~~~~i~~iE---------------eP-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~ 288 (393)
T 3u9i_A 226 CGYTAPDALRLLDMLGVHGIVPALFE---------------QP-VAKDDEEGLRRLTATR-RVPVAADESVASATDAARL 288 (393)
T ss_dssp SCCCHHHHHHHHHTTTTTTCCCSEEE---------------CC-SCTTCTTHHHHHHHTC-SSCEEESTTCCSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhCCCCeEEEE---------------CC-CCCCcHHHHHHHHhhC-CCcEEeCCcCCCHHHHHHH
Confidence 222345688899999 777777772 11 2345788889999987 6999998899999999999
Q ss_pred hhh--cCEEEE
Q psy2378 223 LNY--IDGVML 231 (956)
Q Consensus 223 l~~--ad~Vmi 231 (956)
++. +|.|.+
T Consensus 289 i~~~a~d~i~~ 299 (393)
T 3u9i_A 289 ARNAAVDVLNI 299 (393)
T ss_dssp HHTTCCSEEEE
T ss_pred HHcCCCCEEEe
Confidence 876 998876
No 292
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.0058 Score=64.91 Aligned_cols=80 Identities=8% Similarity=-0.026 Sum_probs=68.1
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++|+.+++.|++.+++--=+ + .+.+.++++++.+ .+||..-|||++. ++++++ . ||-|.
T Consensus 40 p~~~A~~~~~~Ga~~l~vvDL~----~-----------~n~~~i~~i~~~~-~~pv~vgGGir~~-~~~~~l-~Ga~~Vi 101 (260)
T 2agk_A 40 SSYYAKLYKDRDVQGCHVIKLG----P-----------NNDDAAREALQES-PQFLQVGGGINDT-NCLEWL-KWASKVI 101 (260)
T ss_dssp HHHHHHHHHHTTCTTCEEEEES----S-----------SCHHHHHHHHHHS-TTTSEEESSCCTT-THHHHT-TTCSCEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCC----C-----------CCHHHHHHHHhcC-CceEEEeCCCCHH-HHHHHh-cCCCEEE
Confidence 5789999999999999873211 0 3778899999988 6999999999987 999999 8 99999
Q ss_pred EccccccC-----CcchHHHHHhh
Q psy2378 231 LGREAYKN-----PFLMSNFDLNY 249 (956)
Q Consensus 231 iGR~~l~~-----P~l~~~i~~~~ 249 (956)
+|..++.| |.++.++.+.+
T Consensus 102 igs~a~~~~g~~~p~~~~~~~~~~ 125 (260)
T 2agk_A 102 VTSWLFTKEGHFQLKRLERLTELC 125 (260)
T ss_dssp ECGGGBCTTCCBCHHHHHHHHHHH
T ss_pred ECcHHHhhcCCCCHHHHHHHHHHh
Confidence 99999999 99888887654
No 293
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.91 E-value=0.046 Score=58.13 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=70.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 153 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~ 153 (956)
+++...+-|+...+.|+|.||||++++ ....++.+..+|+++++.+++|++|-..- .
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~~~~pisIDT~~-----------~ 88 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEVVDLPCCLDSTN-----------P 88 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHHCCCCEEEECSC-----------H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHhCCCeEEEeCCC-----------H
Confidence 456677777777889999999998773 23468899999999999889999986431 2
Q ss_pred HHHHHHHHc--CCCEEE-EcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe
Q psy2378 154 DFVGTVSSA--GCRTFI-VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 210 (956)
Q Consensus 154 ~~a~~l~~~--G~~~i~-vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n 210 (956)
+++++..++ |++.|. |++.. .+|+.+..+.+.. +.||++.
T Consensus 89 ~v~~aal~a~~Ga~iINdvs~~~----------------d~~~~~~~~~a~~-~~~vv~m 131 (271)
T 2yci_X 89 DAIEAGLKVHRGHAMINSTSADQ----------------WKMDIFFPMAKKY-EAAIIGL 131 (271)
T ss_dssp HHHHHHHHHCCSCCEEEEECSCH----------------HHHHHHHHHHHHH-TCEEEEE
T ss_pred HHHHHHHHhCCCCCEEEECCCCc----------------cccHHHHHHHHHc-CCCEEEE
Confidence 566666667 999997 66532 1344555555555 6888873
No 294
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=95.88 E-value=0.094 Score=53.48 Aligned_cols=131 Identities=14% Similarity=0.165 Sum_probs=83.3
Q ss_pred EEec--CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCC
Q psy2378 68 FQVG--DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD 145 (956)
Q Consensus 68 vQl~--g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~ 145 (956)
+-++ +++|+.+ ++.+.++|+|.|-+|.... . ++++.+++.. -+++......+.
T Consensus 58 ~kl~DI~~t~~~~---v~~~~~~Gad~vtvh~~~g----------------~----~~i~~~~~~~--gv~vl~~t~~~~ 112 (208)
T 2czd_A 58 LKLADIPNTNRLI---ARKVFGAGADYVIVHTFVG----------------R----DSVMAVKELG--EIIMVVEMSHPG 112 (208)
T ss_dssp EEECSCHHHHHHH---HHHHHHTTCSEEEEESTTC----------------H----HHHHHHHTTS--EEEEECCCCSGG
T ss_pred eeeCchHHHHHHH---HHHHHhcCCCEEEEeccCC----------------H----HHHHHHHHhC--CcEEEEecCCcc
Confidence 5555 5566544 4455579999999986421 1 2255666554 444444432221
Q ss_pred CCc--HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCH-HHHHHH
Q psy2378 146 INS--YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-KEIDLH 222 (956)
Q Consensus 146 ~~~--~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~-~da~~~ 222 (956)
... .+....+++...+.|++.+.+... ..+.++++++..+.-+++..|||+.. .++.++
T Consensus 113 ~~~~~~~~v~~~~~~a~~~G~~G~~~~~~------------------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~ 174 (208)
T 2czd_A 113 ALEFINPLTDRFIEVANEIEPFGVIAPGT------------------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDA 174 (208)
T ss_dssp GGTTTGGGHHHHHHHHHHHCCSEEECCCS------------------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhCCcEEEECCC------------------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHH
Confidence 100 233556788888999998865432 23456777777654467799999752 267788
Q ss_pred hhh-cCEEEEccccccCCcc
Q psy2378 223 LNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 223 l~~-ad~VmiGR~~l~~P~l 241 (956)
++. +|++.+||+.+..++.
T Consensus 175 ~~aGad~vvvGr~I~~a~dp 194 (208)
T 2czd_A 175 VKAGADYIIVGRAIYNAPNP 194 (208)
T ss_dssp HHHTCSEEEECHHHHTSSSH
T ss_pred HHcCCCEEEEChHHhcCCCH
Confidence 877 9999999999886653
No 295
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=95.86 E-value=0.031 Score=62.97 Aligned_cols=132 Identities=8% Similarity=0.098 Sum_probs=94.3
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 144 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 144 (956)
|+...+...+|+++++.|+.+.+.||..|-+..|.. +++.-.+.+++||++++ . +++++...
T Consensus 135 ~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~-~--~~L~vDaN 196 (389)
T 3s5s_A 135 TTDITITTGSPERAEEAARRAAAMGFRALKVKVGGR---------------LAASDPARIEAIHAAAP-G--ASLILDGN 196 (389)
T ss_dssp ECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCT-T--CEEEEECT
T ss_pred EEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCC-C--CeEEEECC
Confidence 444567778999999999988888999999876421 13344566788888773 2 24444222
Q ss_pred CCCcHHHHHHHHHHH--HHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 145 DINSYDFVRDFVGTV--SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 145 ~~~~~~~~~~~a~~l--~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
..-+.++++++++.| ++.++.+| ++. .++.+++..+++++.. ++||.+.=.+.+..++.++
T Consensus 197 ~~w~~~~A~~~~~~L~~~~~~i~~i---------------EeP-~~~~d~~~~~~l~~~~-~iPIa~dEs~~~~~~~~~~ 259 (389)
T 3s5s_A 197 GGLTAGEALALVAHARRLGADVALL---------------EQP-VPRDDWDGMKEVTRRA-GVDVAADESAASAEDVLRV 259 (389)
T ss_dssp TCSCHHHHHHHHHHHHHTTCEEEEE---------------ECC-SCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhCCCCeEEE---------------ECC-CCcccHHHHHHHHhhC-CCCEEECCCCCCHHHHHHH
Confidence 222345688999999 55554444 111 2345899999999987 6999998899999999999
Q ss_pred hhh--cCEEEE
Q psy2378 223 LNY--IDGVML 231 (956)
Q Consensus 223 l~~--ad~Vmi 231 (956)
++. +|.|.+
T Consensus 260 i~~~a~d~v~~ 270 (389)
T 3s5s_A 260 AAERAATVVNI 270 (389)
T ss_dssp HHTTCCSEEEE
T ss_pred HHcCCCCEEEe
Confidence 876 998886
No 296
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=95.83 E-value=0.1 Score=54.84 Aligned_cols=182 Identities=17% Similarity=0.110 Sum_probs=114.0
Q ss_pred CcCcCCHHHHHHHHHcCCCcEEEecc--cccccccCC-------chhcccc-----CCCCCCEEEEe---cCCCHHHHHH
Q psy2378 18 MMNLTDRHCRMFHRQITRYSWLYTEM--FTTQAILGN-------KKHCLDF-----NAEEHPIAFQV---GDNEPKKLAK 80 (956)
Q Consensus 18 M~~~td~~fR~~~~~~g~~~l~~tem--~~~~~l~~~-------~~~~~~~-----~~~~~p~~vQl---~g~~~~~~~~ 80 (956)
|.+.=|..+-+++.+.| ++.+++.- ++. . .|. ...++.. ...+.|+++=+ +|+++ .+
T Consensus 24 ~~~ayD~~sA~~~~~aG-~dai~vg~~s~a~-~-~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~---~~ 97 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAG-FSGLTIGSHPVAD-A-TGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP---AD 97 (255)
T ss_dssp CCEESSHHHHHHHHHTT-CSCEEECHHHHHH-H-TTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH---HH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEEChHHHHH-h-CCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH---HH
Confidence 45667889999988887 67777762 332 2 221 1111110 11237888877 45566 77
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc---CccEEEEeccC-----CCC-CCcHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIG-----IDD-INSYDF 151 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g-----~~~-~~~~~~ 151 (956)
.++++.++|+++|.|--+... -|.. +-..+...+-|++++++. ++|+.|--|.. .++ ....++
T Consensus 98 ~~~~l~~aGa~gv~iEd~~~~-------~~k~-l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ 169 (255)
T 2qiw_A 98 LIAQILEAGAVGINVEDVVHS-------EGKR-VREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVE 169 (255)
T ss_dssp HHHHHHHTTCCEEEECSEEGG-------GTTE-ECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCC-------CCCc-ccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHH
Confidence 777777899999999754311 1222 335566667777777663 67855555543 221 223567
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe--cCC----CCHHHHHHHhhh
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN--GGI----KTKKEIDLHLNY 225 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n--GgI----~s~~da~~~l~~ 225 (956)
+++=++.++++|+|.|.+++- .+.+.++++.+.+ ++|+-.+ ++- .+.+ ++-+-
T Consensus 170 ai~ra~a~~eAGAd~i~~e~~-----------------~~~~~~~~i~~~~-~~P~n~~~~~~~~~p~~~~~---eL~~l 228 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYPVGL-----------------STAEQVERLVDAV-SVPVNITAHPVDGHGAGDLA---TLAGL 228 (255)
T ss_dssp HHHHHHHHHHHTCSEEEECCC-----------------CSHHHHHHHHTTC-SSCBEEECBTTTBBTTBCHH---HHHHT
T ss_pred HHHHHHHHHHcCCcEEEEcCC-----------------CCHHHHHHHHHhC-CCCEEEEecCCCCCCCCCHH---HHHHc
Confidence 888899999999999999763 2567888999888 6887665 332 2333 33333
Q ss_pred -cCEEEEccc
Q psy2378 226 -IDGVMLGRE 234 (956)
Q Consensus 226 -ad~VmiGR~ 234 (956)
...|..|-.
T Consensus 229 Gv~~v~~~~~ 238 (255)
T 2qiw_A 229 GVRRVTFGPL 238 (255)
T ss_dssp TCCEEECTTH
T ss_pred CCCEEEEHHH
Confidence 777777654
No 297
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=95.81 E-value=0.043 Score=56.40 Aligned_cols=138 Identities=12% Similarity=0.141 Sum_probs=88.0
Q ss_pred CCEE--EEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc
Q psy2378 64 HPIA--FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 141 (956)
Q Consensus 64 ~p~~--vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 141 (956)
.+++ +-+. ..|+.+.+ .+.++|+|.|-+|.... .+.+.++++.+++ .+.++.+++-.
T Consensus 57 ~~v~lD~kl~-dip~t~~~---~~~~~Gad~itvh~~~g----------------~~~l~~~~~~~~~-~g~~~~~~ll~ 115 (216)
T 1q6o_A 57 KIVLADAKIA-DAGKILSR---MCFEANADWVTVICCAD----------------INTAKGALDVAKE-FNGDVQIELTG 115 (216)
T ss_dssp SEEEEEEEEC-SCHHHHHH---HHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHH-TTCEEEEEECS
T ss_pred CeEEEEEEec-ccHHHHHH---HHHhCCCCEEEEeccCC----------------HHHHHHHHHHHHH-cCCCceeeeee
Confidence 4444 4444 45777766 45679999999996321 2345566777775 37777666542
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcc-cccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEEecCCCCHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHA-RNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEI 219 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~-r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~nGgI~s~~da 219 (956)
++. . .-++.+++.|.+.+.+|. +.....|+.| ..+.++++++..+ ++||+..|||+ ++.+
T Consensus 116 ~~t--~------~~~~~l~~~~~~~~vl~~a~~~~~~G~~g---------~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~ 177 (216)
T 1q6o_A 116 YWT--W------EQAQQWRDAGIGQVVYHRSRDAQAAGVAW---------GEADITAIKRLSDMGFKVTVTGGLA-LEDL 177 (216)
T ss_dssp CCC--H------HHHHHHHHTTCCEEEEECCHHHHHTTCCC---------CHHHHHHHHHHHHTTCEEEEESSCC-GGGG
T ss_pred CCC--h------hhHHHHHhcCcHHHHHHHHHHHHhcCCCC---------CHHHHHHHHHhcCCCCcEEEECCcC-hhhH
Confidence 333 1 123455667887777763 2211123221 2355566665442 58899999997 8888
Q ss_pred HHHhhh-cCEEEEccccccCCc
Q psy2378 220 DLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 220 ~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
.++++. ||++.+||+....++
T Consensus 178 ~~~~~aGad~ivvG~~I~~a~d 199 (216)
T 1q6o_A 178 PLFKGIPIHVFIAGRSIRDAAS 199 (216)
T ss_dssp GGGTTSCCSEEEESHHHHTSSC
T ss_pred HHHHHcCCCEEEEeehhcCCCC
Confidence 888887 999999999987655
No 298
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.78 E-value=0.013 Score=60.48 Aligned_cols=140 Identities=17% Similarity=0.172 Sum_probs=85.9
Q ss_pred CCCEE--EEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEec
Q psy2378 63 EHPIA--FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 140 (956)
Q Consensus 63 ~~p~~--vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 140 (956)
+.|++ +-+. ..|+.++ +.+.++|+|+|=+|...+ .+.+.++++.+++. +.+..+.+
T Consensus 59 ~~~i~ld~~l~-d~p~~~~---~~~~~aGad~i~vh~~~~----------------~~~~~~~~~~~~~~-g~~~~~d~- 116 (218)
T 3jr2_A 59 NHILVCDMKTT-DGGAILS---RMAFEAGADWITVSAAAH----------------IATIAACKKVADEL-NGEIQIEI- 116 (218)
T ss_dssp TSEEEEEEEEC-SCHHHHH---HHHHHHTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEEC-
T ss_pred CCcEEEEEeec-ccHHHHH---HHHHhcCCCEEEEecCCC----------------HHHHHHHHHHHHHh-CCccceee-
Confidence 34554 3444 4566654 556678999999986432 34456777777764 55544322
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEccc-ccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHAR-NAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r-~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
++.. +. +-++.+.+.|+|++.++.. +....| . ...+..++.+++++. +++|+++.||| +++.+
T Consensus 117 l~~~---T~----~~~~~~~~~g~d~v~~~~~~~~~~~g---~---~~~~~~l~~i~~~~~--~~~pi~v~GGI-~~~~~ 180 (218)
T 3jr2_A 117 YGNW---TM----QDAKAWVDLGITQAIYHRSRDAELAG---I---GWTTDDLDKMRQLSA--LGIELSITGGI-VPEDI 180 (218)
T ss_dssp CSSC---CH----HHHHHHHHTTCCEEEEECCHHHHHHT---C---CSCHHHHHHHHHHHH--TTCEEEEESSC-CGGGG
T ss_pred eecC---CH----HHHHHHHHcCccceeeeeccccccCC---C---cCCHHHHHHHHHHhC--CCCCEEEECCC-CHHHH
Confidence 3331 11 2234456679999877432 211111 1 011234455555554 37999999999 59999
Q ss_pred HHHhhh-cCEEEEccccccCCc
Q psy2378 220 DLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 220 ~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
.++++. ||+|.+||++...++
T Consensus 181 ~~~~~aGAd~vvvGsaI~~a~d 202 (218)
T 3jr2_A 181 YLFEGIKTKTFIAGRALAGAEG 202 (218)
T ss_dssp GGGTTSCEEEEEESGGGSHHHH
T ss_pred HHHHHcCCCEEEEchhhcCCCC
Confidence 999888 999999999886544
No 299
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=95.77 E-value=0.09 Score=57.79 Aligned_cols=123 Identities=8% Similarity=0.105 Sum_probs=91.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCc--cEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI--DITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~--pv~vKir~g~~~~~~~~ 150 (956)
.+++++++.|+.+.+.||..+-|..|. .+++.-.+.+++||++++- ++.+-.-.+|+ .+
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~----~~ 175 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWD----RA 175 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCC----HH
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCC----HH
Confidence 578889888888888999999987652 2456667889999998753 33333233443 35
Q ss_pred HHHHHHHHHHHc---CCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--
Q psy2378 151 FVRDFVGTVSSA---GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-- 225 (956)
Q Consensus 151 ~~~~~a~~l~~~---G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-- 225 (956)
+++++++.|++. ++.+| ++. .++.+|+..+++++.. ++||.+-=.+.+..++.++++.
T Consensus 176 ~A~~~~~~l~~~~~~~i~~i---------------EqP-~~~~d~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~~a 238 (332)
T 2ozt_A 176 TANRWFAWLDRHGNGKIEYV---------------EQP-LPPDQWQALLSLAQTV-TTAIALDESVVSAAEVQRWVDRGW 238 (332)
T ss_dssp HHHHHHHHHHHHCCTTEEEE---------------ECC-SCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhccCCccee---------------ECC-CCCCCHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHhCC
Confidence 688999999998 66655 111 2245899999999887 6999988889999999999987
Q ss_pred cCEEEE
Q psy2378 226 IDGVML 231 (956)
Q Consensus 226 ad~Vmi 231 (956)
+|.+.+
T Consensus 239 ~~~i~i 244 (332)
T 2ozt_A 239 PGFFVI 244 (332)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 776665
No 300
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.71 E-value=0.066 Score=57.51 Aligned_cols=195 Identities=13% Similarity=0.136 Sum_probs=115.8
Q ss_pred CcCCHHHHHHHHHcCCCcEEEe-cc-ccc--cccc--C--Cchhcc----cc--CCCCCCEEEEec-C-CCHHHHHHHHH
Q psy2378 20 NLTDRHCRMFHRQITRYSWLYT-EM-FTT--QAIL--G--NKKHCL----DF--NAEEHPIAFQVG-D-NEPKKLAKSAK 83 (956)
Q Consensus 20 ~~td~~fR~~~~~~g~~~l~~t-em-~~~--~~l~--~--~~~~~~----~~--~~~~~p~~vQl~-g-~~~~~~~~aA~ 83 (956)
+.=|..+-+++...| ++.+++ .. ++. .+.. + ....++ .+ .....|+++=+= | .+|++..+.++
T Consensus 24 ~a~D~~sA~l~e~aG-f~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~ 102 (302)
T 3fa4_A 24 GVYDGLSARVALSAG-FDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTE 102 (302)
T ss_dssp EECSHHHHHHHHTTT-CSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHH
T ss_pred cCcCHHHHHHHHHcC-CCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHH
Confidence 566888888888887 677765 42 211 1111 1 011111 11 113788888872 2 26889999999
Q ss_pred HHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc---CccEEEEeccCCCCCCcHHHHHHHHHHHH
Q psy2378 84 IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIGIDDINSYDFVRDFVGTVS 160 (956)
Q Consensus 84 ~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~---~~pv~vKir~g~~~~~~~~~~~~~a~~l~ 160 (956)
.+.++|+.+|.|--... ++.+..--|..+....+++..| ++.+++. +.++.+--|...-....++++++=+++..
T Consensus 103 ~l~~aGaagv~iEDq~~-~Krcgh~~gk~l~~~~e~~~rI-~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~ 180 (302)
T 3fa4_A 103 QYSRSGVAAFHIEDQVQ-TKRCGHLAGKILVDTDTYVTRI-RAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAAR 180 (302)
T ss_dssp HHHHTTCCEEEECSBCC-C-------CCCBCCHHHHHHHH-HHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCC-CcccCCCCCCeecCHHHHHHHH-HHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHH
Confidence 99999999999965432 2322222244444433444444 4444432 55666655653211123567888899999
Q ss_pred HcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe---cC---CCCHHHHHHHhhhcCEEEEccc
Q psy2378 161 SAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG---IKTKKEIDLHLNYIDGVMLGRE 234 (956)
Q Consensus 161 ~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n---Gg---I~s~~da~~~l~~ad~VmiGR~ 234 (956)
++|+|.|-+++-+ +.+.++++.+.+++.|+..| |+ ..+.++..++ .+..|..+-.
T Consensus 181 eAGAD~ifi~g~~-----------------~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~l--Gv~~v~~~~~ 241 (302)
T 3fa4_A 181 DAGADVGFLEGIT-----------------SREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEM--GFRIIIFPFA 241 (302)
T ss_dssp TTTCSEEEETTCC-----------------CHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHH--TCSEEEETTT
T ss_pred HcCCCEEeecCCC-----------------CHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHc--CCCEEEEchH
Confidence 9999999998743 55778889888755888776 22 2344444333 2777777765
Q ss_pred cc
Q psy2378 235 AY 236 (956)
Q Consensus 235 ~l 236 (956)
++
T Consensus 242 ~~ 243 (302)
T 3fa4_A 242 AL 243 (302)
T ss_dssp TH
T ss_pred HH
Confidence 54
No 301
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=95.54 E-value=0.044 Score=61.74 Aligned_cols=125 Identities=11% Similarity=0.046 Sum_probs=92.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~ 149 (956)
+.+++++++.++.+.+.||..+-+..|- .+++.=.+.++++|++++ +++.|-.-.+|+ .
T Consensus 162 ~~~~~~~~~~~~~~~~~G~~~~Kikvg~---------------~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~----~ 222 (388)
T 4h83_A 162 GEPLGSIADEMHNYQELGLAGVKFKVGG---------------LSAAEDAARITAAREAAGDDFIICIDANQGYK----P 222 (388)
T ss_dssp TCTTCSHHHHHHHHHHHTBSEEEEECSS---------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCBC----H
T ss_pred CCCHHHHHHHHHHHHHcCCceEeecCCC---------------CCHHHHHHHHHHHHHhcCCCeEEEEecCcCCC----H
Confidence 4456889999999999999999886532 134444567888998875 445444444564 3
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++++.|++.++.+|- +.-.+.-+++..+++++.. ++||.+-=.+.+..++.++++. +|
T Consensus 223 ~~A~~~~~~l~~~~~~~iE---------------eP~~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d 286 (388)
T 4h83_A 223 AVAVDLSRRIADLNIRWFE---------------EPVEWHNDKRSMRDVRYQG-SVPVCAGQTEFSASGCRDLMETGAID 286 (388)
T ss_dssp HHHHHHHHHTTTSCCCCEE---------------SCBCSTTHHHHHHHHHHHS-SSCEEECTTCSSHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhhhcCcceee---------------cCcccccchHHHHHHHhhc-CCCccCCccccChHhHHHHHHcCCCC
Confidence 5688999999999887772 2111123678889999988 7999998899999999999987 89
Q ss_pred EEEE
Q psy2378 228 GVML 231 (956)
Q Consensus 228 ~Vmi 231 (956)
.|++
T Consensus 287 ~i~~ 290 (388)
T 4h83_A 287 VCNF 290 (388)
T ss_dssp EECC
T ss_pred eEee
Confidence 8764
No 302
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.48 E-value=0.033 Score=55.70 Aligned_cols=69 Identities=10% Similarity=0.065 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
..-.+.+++...|++.+-++. --+.++++++.+ ++|||+.|.|.|.+|+.++++. ||+|..
T Consensus 117 ~~~~~~i~~~~PD~iEiLPGi-----------------~p~iI~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsT 178 (192)
T 3kts_A 117 NKGVALIQKVQPDCIELLPGI-----------------IPEQVQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTT 178 (192)
T ss_dssp HHHHHHHHHHCCSEEEEECTT-----------------CHHHHHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCch-----------------hHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEe
Confidence 455677788888888664321 126889999987 8999999999999999999999 999999
Q ss_pred ccccccCC
Q psy2378 232 GREAYKNP 239 (956)
Q Consensus 232 GR~~l~~P 239 (956)
+...||+-
T Consensus 179 s~~~LW~~ 186 (192)
T 3kts_A 179 SNKHLWEG 186 (192)
T ss_dssp CCGGGGTT
T ss_pred CCHHHhCc
Confidence 99988874
No 303
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.46 E-value=0.07 Score=59.28 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 195 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i 195 (956)
+++...+.++.+|+.-.+++.+- .++... ..+.++.+.++|+|.|+++.-. |. ++.-.+.+
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~--vg~~~~-----~~~~~~~lieaGvd~I~idta~----G~--------~~~~~~~I 140 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAA--VGAAPG-----NEERVKALVEAGVDVLLIDSSH----GH--------SEGVLQRI 140 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEE--CCSCTT-----CHHHHHHHHHTTCSEEEEECSC----TT--------SHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCceeEEEE--eccChh-----HHHHHHHHHhCCCCEEEEeCCC----CC--------CHHHHHHH
Confidence 47778888888887533444333 333221 2467889999999999986421 10 01234678
Q ss_pred HHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEc
Q psy2378 196 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 196 ~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiG 232 (956)
+++++.+|++|||+ |.+.|+++++++.+. ||+|.+|
T Consensus 141 ~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 141 RETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 89999887889876 778999999999988 9999996
No 304
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=95.43 E-value=0.16 Score=56.65 Aligned_cols=129 Identities=12% Similarity=0.165 Sum_probs=96.0
Q ss_pred EEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCcc--EEEEeccCC
Q psy2378 67 AFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID--ITVKHRIGI 143 (956)
Q Consensus 67 ~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p--v~vKir~g~ 143 (956)
...+. +..++.+.+.++.+.+.||..+-+..|- .+++.-.+.++++|++++-. +.+-.-.+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~~~ 199 (370)
T 2chr_A 135 AWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQAW 199 (370)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSS---------------SCHHHHHHHHHHHHHHTTTTSEEEEECTTCC
T ss_pred eeeeccCchhhhHHHHHHHHhhcccceeeccccc---------------CChHHHHHHHHHHHHhcCCCcEEEecCCCCC
Confidence 33444 4566778888888899999998876542 24555667788999888544 444444456
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHh
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL 223 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l 223 (956)
+. +++.++++.|++.++.+|- +. .++.+++..+++++.. ++||.+.=.+.+..++.+++
T Consensus 200 ~~----~~A~~~~~~l~~~~~~~iE---------------eP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~ 258 (370)
T 2chr_A 200 DE----QVASVYIPELEALGVELIE---------------QP-VGRENTQALRRLSDNN-RVAIMADESLSTLASAFDLA 258 (370)
T ss_dssp CT----HHHHHHHHHHHTTTCCEEE---------------CC-SCSSCHHHHHHHHHHC-SSEEEESSSCCSHHHHHHHH
T ss_pred CH----HHHHHHHHHHHhcCCceec---------------CC-CChhhhhhhhHHhhhc-cCCccCCccCCCHHHHHHHH
Confidence 43 4688999999999988872 11 2346899999999998 79999888999999999999
Q ss_pred hh--cCEEEE
Q psy2378 224 NY--IDGVML 231 (956)
Q Consensus 224 ~~--ad~Vmi 231 (956)
+. +|.|++
T Consensus 259 ~~~a~d~i~~ 268 (370)
T 2chr_A 259 RDRSVDVFSL 268 (370)
T ss_dssp TTTCCSEECC
T ss_pred HcCCCcEEEe
Confidence 86 887754
No 305
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=95.30 E-value=0.11 Score=59.05 Aligned_cols=122 Identities=10% Similarity=0.060 Sum_probs=89.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCcc--EEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID--ITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p--v~vKir~g~~~~~~~ 149 (956)
..+++++++.|+...+.||..+-+..|-. ++...+.++++|++++-. +.|-.-.+|+ .
T Consensus 186 ~~~~~~~~~~a~~~~~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~----~ 245 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQAKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAHT----A 245 (412)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCCC----H
T ss_pred CCcHHHHHHHHHHHHhcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCCC----H
Confidence 45789999999989999999998854321 122345567888887544 4433333453 3
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cC
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 227 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad 227 (956)
++++++++.|++.|+.+|. +. .++.+++..+++++.. ++||.+.=.+.+..++.++++. +|
T Consensus 246 ~~A~~~~~~l~~~~l~~iE---------------qP-~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d 308 (412)
T 4h1z_A 246 SEAVALIKAMEPHGLWFAE---------------AP-VRTEDIDGLARVAASV-STAIAVGEEWRTVHDMVPRVARRALA 308 (412)
T ss_dssp HHHHHHHHHHGGGCEEEEE---------------CC-SCTTCHHHHHHHHHHC-SSEEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhhcccccceec---------------CC-CCccchHHHHHHHhhc-CCccccCCcccchHhHHHHHHcCCCC
Confidence 5688999999999987762 11 2346899999999998 6999998899999999999986 78
Q ss_pred EEE
Q psy2378 228 GVM 230 (956)
Q Consensus 228 ~Vm 230 (956)
.|+
T Consensus 309 iv~ 311 (412)
T 4h1z_A 309 IVQ 311 (412)
T ss_dssp EEC
T ss_pred EEE
Confidence 664
No 306
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=95.27 E-value=0.91 Score=47.72 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=76.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEecc
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~ 141 (956)
..++.+.|.+.+.+++...++.+.+.|+|.||+=. |-+.. ..+.+.+.+.++.+++.+ ++|+.+=+|.
T Consensus 19 ~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRv---------D~l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt 87 (257)
T 2yr1_A 19 EPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRA---------DFFRA--IDDQERVLATANGLRNIAGEIPILFTIRS 87 (257)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEG---------GGCTT--TTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred CcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEe---------ecccc--cCcHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 34588999999999998888888889999999932 32211 124678899999999988 8999999998
Q ss_pred CCCCC----CcHHHHHHHHHHHHHcC-CCEEEEcccc
Q psy2378 142 GIDDI----NSYDFVRDFVGTVSSAG-CRTFIVHARN 173 (956)
Q Consensus 142 g~~~~----~~~~~~~~~a~~l~~~G-~~~i~vh~r~ 173 (956)
.++.+ .+.++..++.+.+.+.| +|+|.|.-..
T Consensus 88 ~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~ 124 (257)
T 2yr1_A 88 EREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAY 124 (257)
T ss_dssp TTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGG
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 65432 22345677888888888 9999997543
No 307
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.25 E-value=0.057 Score=55.07 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=80.1
Q ss_pred ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 133 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 133 ~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.|+..-+|... .++...+++.|.+.|++.|.|.-|+ |...+.|+++++.+|+ ++|+.|.
T Consensus 13 ~~vi~Vir~~~-----~~~a~~~a~al~~gGi~~iEvt~~t---------------~~a~~~I~~l~~~~p~-~~IGAGT 71 (217)
T 3lab_A 13 KPLIPVIVIDD-----LVHAIPMAKALVAGGVHLLEVTLRT---------------EAGLAAISAIKKAVPE-AIVGAGT 71 (217)
T ss_dssp CSEEEEECCSC-----GGGHHHHHHHHHHTTCCEEEEETTS---------------TTHHHHHHHHHHHCTT-SEEEEEC
T ss_pred CCEEEEEEcCC-----HHHHHHHHHHHHHcCCCEEEEeCCC---------------ccHHHHHHHHHHHCCC-CeEeecc
Confidence 46666677632 2357899999999999999998887 2467899999999965 8999999
Q ss_pred CCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhc---cC-CCCCCCCCHHHHHHH
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYY---SN-LPQYKIPTRIDIINL 267 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~---~~-~~~~~~~~~~e~~~~ 267 (956)
|.|+++++++++. |++++. +. -||.+.+..++.-. +. ...+...|..|+...
T Consensus 72 Vlt~~~a~~ai~AGA~fivs--P~-~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A 128 (217)
T 3lab_A 72 VCTADDFQKAIDAGAQFIVS--PG-LTPELIEKAKQVKLDGQWQGVFLPGVATASEVMIA 128 (217)
T ss_dssp CCSHHHHHHHHHHTCSEEEE--SS-CCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHH
T ss_pred ccCHHHHHHHHHcCCCEEEe--CC-CcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHH
Confidence 9999999999998 999976 21 36666665554211 01 110123567776655
No 308
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.17 E-value=0.37 Score=50.80 Aligned_cols=153 Identities=10% Similarity=0.109 Sum_probs=98.0
Q ss_pred cCcCCHHHHHHHHHcCCCcEEEecccccccccCC-------chhcc------ccCCCCCCEEEEec-C--CCHHHHHHHH
Q psy2378 19 MNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGN-------KKHCL------DFNAEEHPIAFQVG-D--NEPKKLAKSA 82 (956)
Q Consensus 19 ~~~td~~fR~~~~~~g~~~l~~tem~~~~~l~~~-------~~~~~------~~~~~~~p~~vQl~-g--~~~~~~~~aA 82 (956)
.+.=|.++.+++.+.| +|.+.|.--......|. ..+++ .......|+++=+= | .+|++..+.|
T Consensus 34 ~tayDa~sA~l~e~aG-~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a 112 (275)
T 3vav_A 34 LTCYDASFAALLDRAN-VDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASA 112 (275)
T ss_dssp EECCSHHHHHHHHHTT-CSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHH
T ss_pred EeCcCHHHHHHHHHcC-CCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHH
Confidence 3456888888888887 67776662111111121 11111 11223467888773 4 5899988888
Q ss_pred HHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc---------CC----CCCCcH
Q psy2378 83 KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI---------GI----DDINSY 149 (956)
Q Consensus 83 ~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---------g~----~~~~~~ 149 (956)
.++.++|+++|.|--| ....+.+++++++ ++||.--+.+ |+ ......
T Consensus 113 ~rl~kaGa~aVklEdg-------------------~~~~~~i~~l~~~-GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a 172 (275)
T 3vav_A 113 VKLMRAGAQMVKFEGG-------------------EWLAETVRFLVER-AVPVCAHVGLTPQSVHAFGGFKVQGKTEAGA 172 (275)
T ss_dssp HHHHHTTCSEEEEECC-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHC---CCCCSHHHH
T ss_pred HHHHHcCCCEEEECCc-------------------hhHHHHHHHHHHC-CCCEEEecCCCceEEeccCCeEEEcCCHHHH
Confidence 8887789999998532 1245667777654 8888754432 11 111123
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
+++++=+++++++|++.|.+-+=. . +.+++|.+.+ ++|+|+-|
T Consensus 173 ~~~i~rA~a~~eAGA~~ivlE~vp-----------------~-~~a~~It~~l-~iP~igIG 215 (275)
T 3vav_A 173 AQLLRDARAVEEAGAQLIVLEAVP-----------------T-LVAAEVTREL-SIPTIGIG 215 (275)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCC-----------------H-HHHHHHHHHC-SSCEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEecCCC-----------------H-HHHHHHHHhC-CCCEEEEc
Confidence 567888999999999999886532 2 3688898888 79998766
No 309
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=95.10 E-value=0.098 Score=59.83 Aligned_cols=120 Identities=13% Similarity=0.181 Sum_probs=91.5
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 150 (956)
.+|+++++.|+.+.+ .||..+-+..|-+ +++.-.+.+++||+++ +.++.|-.-.+|+ .+
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~----~~ 250 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWT----VE 250 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBC----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCC----HH
Confidence 689999999988765 5999999875431 3555567888998887 4455555444564 35
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 228 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~ 228 (956)
+++++++.|++. +.+| ++. ..+++..+++++.+ ++||.+.-.+.++.++.++++. +|.
T Consensus 251 ~Ai~~~~~L~~~-l~~i---------------EeP---~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~di 310 (445)
T 3va8_A 251 TSKWVAKELEGI-VEYL---------------EDP---AGEIEGMAAVAKEA-SMPLATNMAVVAFDHLPPSILQDAVQV 310 (445)
T ss_dssp HHHHHHHHTTTT-CSEE---------------ESC---BSHHHHHHHHHTTC-SSCEEESSSCCSGGGHHHHHHTTCCSE
T ss_pred HHHHHHHHHhhh-cCeE---------------eec---CcCHHHHHHHHHcC-CCCEEeCCccCCHHHHHHHHHcCCCCE
Confidence 688999999987 7776 121 13788889999987 6999998899999999999986 998
Q ss_pred EEE
Q psy2378 229 VML 231 (956)
Q Consensus 229 Vmi 231 (956)
|.+
T Consensus 311 v~~ 313 (445)
T 3va8_A 311 ILS 313 (445)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
No 310
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=95.10 E-value=0.67 Score=48.79 Aligned_cols=98 Identities=19% Similarity=0.280 Sum_probs=74.3
Q ss_pred CCC-EEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEec
Q psy2378 63 EHP-IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHR 140 (956)
Q Consensus 63 ~~p-~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir 140 (956)
++| +.|-|.|.+.+++.+.|+.+...|+|.||+=. |-+-. ..+++.+.+.+..+++.. ++|+.+-+|
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~---------D~l~~--~~~~~~v~~~l~~lr~~~~~lPiI~T~R 86 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRV---------DFFEN--VENIKEVKEVLYELRSYIHDIPLLFTFR 86 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEG---------GGCTT--TTCHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEee---------ccccc--cCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 555 88999999999999999999999999999943 32111 135688999999999877 699999999
Q ss_pred cCCCCCC---cHHHHHHHHHHHHHcC-CCEEEEcc
Q psy2378 141 IGIDDIN---SYDFVRDFVGTVSSAG-CRTFIVHA 171 (956)
Q Consensus 141 ~g~~~~~---~~~~~~~~a~~l~~~G-~~~i~vh~ 171 (956)
.-++.+. +.++..++.+.+.+.| +|+|.|.-
T Consensus 87 t~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 121 (258)
T 4h3d_A 87 SVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVEL 121 (258)
T ss_dssp CGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEG
T ss_pred chhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhh
Confidence 8655432 2344566667777766 89999864
No 311
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=95.04 E-value=0.13 Score=58.90 Aligned_cols=120 Identities=9% Similarity=0.149 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 150 (956)
.+|+++++.|+.+.+ .||..+-|..|-. +++.-.+.+++||+++ +.++.|-.-.+|+ .+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~----~~ 252 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWT----PQ 252 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSC----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCC----HH
Confidence 689999999988765 5999999875421 3555567888898887 4455555545565 35
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 228 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~ 228 (956)
+++++++.|++. +.+| ++.. .+++..+++++.. ++||.+.-.+.++.++.++++. +|.
T Consensus 253 ~Ai~~~~~L~~~-l~~i---------------EeP~---~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~di 312 (445)
T 3vdg_A 253 TSVKVAAGLEGV-LEYL---------------EDPT---PGLDGMAEVAAQA-PMPLATNMCVVAFDQLPAAVAKNSVQV 312 (445)
T ss_dssp HHHHHHHHTTTT-CSEE---------------ECCS---SSHHHHHHHHHHC-SSCEEESSSCCSGGGHHHHHHHTCCSE
T ss_pred HHHHHHHHHhhH-HHee---------------eCCC---CCHHHHHHHHhcC-CCCEEcCCcCCCHHHHHHHHHcCCCCE
Confidence 688999999987 7776 1221 2788899999988 6999998899999999999986 998
Q ss_pred EEE
Q psy2378 229 VML 231 (956)
Q Consensus 229 Vmi 231 (956)
|.+
T Consensus 313 v~~ 315 (445)
T 3vdg_A 313 VLS 315 (445)
T ss_dssp EEE
T ss_pred Eee
Confidence 875
No 312
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.03 E-value=0.32 Score=51.09 Aligned_cols=119 Identities=11% Similarity=0.006 Sum_probs=77.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCcc-EEEEecc
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID-ITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p-v~vKir~ 141 (956)
+.|+ +-+..-|.- .|+.++++|||.|=+ |....++ .-|+-..+.-..+.+..-+++|++.++.| |.+-+..
T Consensus 16 g~~i-~~~tayD~~----sA~l~e~aG~d~ilv--Gdsl~~~-~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pf 87 (264)
T 1m3u_A 16 KKRF-ATITAYDYS----FAKLFADEGLNVMLV--GDSLGMT-VQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPF 87 (264)
T ss_dssp TCCE-EEEECCSHH----HHHHHHHHTCCEEEE--CTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCT
T ss_pred CCcE-EEEeCcCHH----HHHHHHHcCCCEEEE--CHHHHHH-HcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 3443 335555543 567788899999976 5443332 23444444556677788889998888765 5555444
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 209 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~ 209 (956)
|.-. +.+++.+-+.++.++|++++.+-+.. ...+.|+.+.+. .|||++
T Consensus 88 gsy~--~~~~a~~~a~rl~kaGa~aVklEgg~----------------e~~~~I~al~~a--gipV~g 135 (264)
T 1m3u_A 88 MAYA--TPEQAFENAATVMRAGANMVKIEGGE----------------WLVETVQMLTER--AVPVCG 135 (264)
T ss_dssp TSSS--SHHHHHHHHHHHHHTTCSEEECCCSG----------------GGHHHHHHHHHT--TCCEEE
T ss_pred CCcC--CHHHHHHHHHHHHHcCCCEEEECCcH----------------HHHHHHHHHHHC--CCCeEe
Confidence 3222 44567788889999999999997653 234567777664 589984
No 313
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.01 E-value=0.25 Score=52.13 Aligned_cols=123 Identities=11% Similarity=0.011 Sum_probs=77.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCcc-EEEEecc
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID-ITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~p-v~vKir~ 141 (956)
+.|+ +-+..-|.- .|+.++++|||.| + .|.-..++ .-|+-..+.-..+.+...+++|++.++.| |.+-+..
T Consensus 16 g~~i-~~~tayDa~----sA~l~e~aG~d~i-l-vGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf 87 (275)
T 1o66_A 16 GEKI-AMLTAYESS----FAALMDDAGVEML-L-VGDSLGMA-VQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPF 87 (275)
T ss_dssp TCCE-EEEECCSHH----HHHHHHHTTCCEE-E-ECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCT
T ss_pred CCcE-EEEeCcCHH----HHHHHHHcCCCEE-E-ECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCC
Confidence 3443 335555543 5677888999999 4 24333322 23444444556778888889998888765 5544443
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
|.- ..+.+++.+-+.++.++|+++|.+-+.. ...+.|+.+.+. .|||++.=|
T Consensus 88 gsy-~~s~~~a~~na~rl~kaGa~aVklEdg~----------------e~~~~I~al~~a--gIpV~gHiG 139 (275)
T 1o66_A 88 GAY-QQSKEQAFAAAAELMAAGAHMVKLEGGV----------------WMAETTEFLQMR--GIPVCAHIG 139 (275)
T ss_dssp TSS-SSCHHHHHHHHHHHHHTTCSEEEEECSG----------------GGHHHHHHHHHT--TCCEEEEEE
T ss_pred CCc-cCCHHHHHHHHHHHHHcCCcEEEECCcH----------------HHHHHHHHHHHc--CCCeEeeec
Confidence 221 1234567788888999999999998653 234567777664 589885433
No 314
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.91 E-value=0.1 Score=57.87 Aligned_cols=95 Identities=11% Similarity=0.218 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 195 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i 195 (956)
+++...+.++.+++....|+.+-+... . .+.++.+.++|+|.|+++... |. +....+.+
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~--~-------~e~a~~l~eaGad~I~ld~a~----G~--------~~~~~~~i 137 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVN--E-------IERAKLLVEAGVDVIVLDSAH----GH--------SLNIIRTL 137 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTT--C-------HHHHHHHHHTTCSEEEECCSC----CS--------BHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCC--H-------HHHHHHHHHcCcCeEEEeCCC----CC--------cHHHHHHH
Confidence 577778889999988788888877542 1 367888999999999987432 10 01234778
Q ss_pred HHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 196 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 196 ~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR 233 (956)
+++++.+ ++|||+ |.+.++++++++.+. +|+|.+|-
T Consensus 138 ~~i~~~~-~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG~ 174 (361)
T 3khj_A 138 KEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVGI 174 (361)
T ss_dssp HHHHHHC-CCEEEE-EEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHhc-CCcEEE-ccCCCHHHHHHHHHcCcCEEEEec
Confidence 8898888 799986 667899999999888 99999963
No 315
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=94.84 E-value=0.17 Score=56.78 Aligned_cols=130 Identities=12% Similarity=0.173 Sum_probs=93.8
Q ss_pred CCCCEEEEecCCC-HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEe
Q psy2378 62 EEHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKH 139 (956)
Q Consensus 62 ~~~p~~vQl~g~~-~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKi 139 (956)
+.-|+-..+...+ |+++++.|+.+.+.||..+-+..| | ..| .+.+++||+++ ++.+.+-.
T Consensus 136 ~~v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~-------------~~d----~~~v~avR~~~~~~~l~vDa 197 (388)
T 3qld_A 136 DRVEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P-------------GRD----RAAIKAVRLRYPDLAIAADA 197 (388)
T ss_dssp SEEEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T-------------TBS----HHHHHHHHHHCTTSEEEEEC
T ss_pred CeEEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c-------------HHH----HHHHHHHHHHCCCCeEEEEC
Confidence 3445556666555 999999999988899999999764 1 123 35677777776 33444444
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
-.+|+.. ++.. ++.|++.++.+|- +. .++.+++..+++++.. ++||.+.=.+.+..++
T Consensus 198 N~~~~~~----~A~~-~~~l~~~~i~~iE---------------eP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 255 (388)
T 3qld_A 198 NGSYRPE----DAPV-LRQLDAYDLQFIE---------------QP-LPEDDWFDLAKLQASL-RTPVCLDESVRSVREL 255 (388)
T ss_dssp TTCCCGG----GHHH-HHHGGGGCCSCEE---------------CC-SCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHH
T ss_pred CCCCChH----HHHH-HHHHhhCCCcEEE---------------CC-CCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHH
Confidence 4456543 3454 7888888877662 11 2345889999999988 6999988899999999
Q ss_pred HHHhhh--cCEEEE
Q psy2378 220 DLHLNY--IDGVML 231 (956)
Q Consensus 220 ~~~l~~--ad~Vmi 231 (956)
.++++. +|.|.+
T Consensus 256 ~~~~~~~a~d~v~~ 269 (388)
T 3qld_A 256 KLTARLGAARVLNV 269 (388)
T ss_dssp HHHHHHTCCSEEEE
T ss_pred HHHHHcCCCCEEEE
Confidence 999986 898887
No 316
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.83 E-value=0.042 Score=60.80 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
...+.++++.++|+|.|+++.-. |++ ..-|+.++.+++..|++|||+ |+|.|+++++.+.+. ||+|
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~----G~~--------~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aGaD~I 166 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAH----AHA--------KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCGADII 166 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSC----CSS--------HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC----CCc--------HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcCCCEE
Confidence 35688999999999999997532 110 124788999999877899987 678999999999988 9999
Q ss_pred EEc
Q psy2378 230 MLG 232 (956)
Q Consensus 230 miG 232 (956)
.+|
T Consensus 167 ~Vg 169 (361)
T 3r2g_A 167 KAG 169 (361)
T ss_dssp EEC
T ss_pred EEc
Confidence 995
No 317
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=94.79 E-value=0.28 Score=53.30 Aligned_cols=145 Identities=14% Similarity=0.154 Sum_probs=83.3
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCccccccc-----CChHHHHHHHHHHhhccCccEEEEe--cc-CCCCCCcH---
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM-----TKPLLVSDCIKAMRDSVEIDITVKH--RI-GIDDINSY--- 149 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~-----~~~~~~~eiv~~v~~~~~~pv~vKi--r~-g~~~~~~~--- 149 (956)
.++.+++.|+|+|-++. .||+.=. ...+++.++.++.++ .++|+.+=+ +. +..+..+.
T Consensus 115 sve~a~~~GADAVk~lv----------~~g~d~~~e~~~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~~~~~~~~~a 183 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLL----------YYDVDGDPQVNVQKQAYIERIGSECQA-EDIPFFLEILTYDETISNNSSVEFA 183 (332)
T ss_dssp CHHHHHHTTCSEEEEEE----------EECTTSCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTBSCTTSHHHH
T ss_pred CHHHHHHcCCCEEEEEE----------EcCCCchHHHHHHHHHHHHHHHHHHHH-cCCceEEEEeccCCCCCCCcchhhh
Confidence 36678899999998864 1332100 112455555555543 499998854 33 22222211
Q ss_pred ----HHHHHHHHHH--HHcCCCEEEEccc-cc-ccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-EecCCCCHHHHH
Q psy2378 150 ----DFVRDFVGTV--SSAGCRTFIVHAR-NA-FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-INGGIKTKKEID 220 (956)
Q Consensus 150 ----~~~~~~a~~l--~~~G~~~i~vh~r-~~-~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~nGgI~s~~da~ 220 (956)
+.....++.+ .+.|+|.+-+--. .. ...|+...+.-|......+..+++.+.. ++|+| .+||+ +.++..
T Consensus 184 ~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~-~~P~v~lsgG~-~~~~fl 261 (332)
T 3iv3_A 184 KVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST-DLPYIYLSAGV-SAELFQ 261 (332)
T ss_dssp TTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC-SSCEEEECTTC-CHHHHH
T ss_pred ccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC-CCCEEEECCCC-CHHHHH
Confidence 2256677777 5779999988521 10 1123322122222222224456666666 69965 79998 566766
Q ss_pred HHhh----h-c--CEEEEccccccC
Q psy2378 221 LHLN----Y-I--DGVMLGREAYKN 238 (956)
Q Consensus 221 ~~l~----~-a--d~VmiGR~~l~~ 238 (956)
+.++ . | .||.+||....+
T Consensus 262 ~~v~~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 262 ETLVFAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp HHHHHHHHHTCCCCEEEECHHHHTT
T ss_pred HHHHHHHHcCCCcceEEeeHHHHHh
Confidence 6664 3 8 999999987766
No 318
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=94.77 E-value=0.35 Score=53.91 Aligned_cols=121 Identities=12% Similarity=0.103 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~ 151 (956)
+++++.+.|+.+.+.||..+-+..| . +++.-.+.++++|++++ +++.+-.--+|+ .++
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG------------~----~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~----~~~ 203 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVG------------R----EPEKDPERVRAAREAIGESVELMVDANGAYT----RKQ 203 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECC------------S----SGGGHHHHHHHHHHHHCTTSEEEEECTTCSC----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC------------C----CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC----HHH
Confidence 5677888888888889999998643 1 45556778888888874 445444444554 356
Q ss_pred HHHHHHHHHHc-CCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCC-ceEEEecCCCCHHHHHHHhhh-cCE
Q psy2378 152 VRDFVGTVSSA-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKKEIDLHLNY-IDG 228 (956)
Q Consensus 152 ~~~~a~~l~~~-G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~-ipVi~nGgI~s~~da~~~l~~-ad~ 228 (956)
++++++.|++. ++.+|. +. .++.+|+..+++++..+. +||.+.=.+.+..++.++ .. +|.
T Consensus 204 a~~~~~~l~~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~~a~d~ 266 (372)
T 3cyj_A 204 ALYWAGAFAREAGISYLE---------------EP-VSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-AGCVDI 266 (372)
T ss_dssp HHHHHHHHHHHHCCCEEE---------------CS-SCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-HTTCSE
T ss_pred HHHHHHHHHhhcCCcEEE---------------CC-CCcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-hCCCCE
Confidence 88999999999 888872 11 124589999999988732 799998889999999988 55 999
Q ss_pred EEE
Q psy2378 229 VML 231 (956)
Q Consensus 229 Vmi 231 (956)
|.+
T Consensus 267 i~i 269 (372)
T 3cyj_A 267 LQA 269 (372)
T ss_dssp EEE
T ss_pred Eec
Confidence 987
No 319
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=94.69 E-value=0.083 Score=58.40 Aligned_cols=164 Identities=9% Similarity=-0.043 Sum_probs=96.0
Q ss_pred CCCcceeeeeeecccccCCcc---hHHHHHHHHHHHhhhcccccccceeEEEecCCCCCCCCHHHHHHHHHHHHHHcccC
Q psy2378 624 IPYKVIINEAIELVKSFGNID---EKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLFK 700 (956)
Q Consensus 624 ~P~c~~~Ce~C~l~k~~~~~~---~~~~v~~vl~eI~~~~~~~~~~~i~~i~fgggtPs~L~~~~l~~ll~~i~~~~~~~ 700 (956)
.-.|++.|.||-+...++... ...-++.+++++++..... ......+.+|..|-.+ +.+....+...+.+.+.-.
T Consensus 114 y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~-~~~~~~i~~g~~TDpy-p~E~~~~ltr~~le~l~~~ 191 (368)
T 4fhd_A 114 ATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINER-APEITRFEAACTSDIV-GIDHLTHSLKKAIEFIGAT 191 (368)
T ss_dssp EEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHH-TTSCEEEESCSSBCHH-HHHTTTCHHHHHHHHHHHC
T ss_pred ccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhc-CCCceEEEEEcCCCcc-hhhHHHhHHHHHHHHHHhC
Confidence 468999999998766554321 1112455666654422111 1123456676655433 3332222333333333222
Q ss_pred CCceeEEEeCCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHhcCCeeEEEEeecCCCC
Q psy2378 701 KNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILG-RTHDSKQAKYAIEIAKQYFNNFNLDLIYALPNQ 779 (956)
Q Consensus 701 ~~~eitle~np~~it~e~L~~L~~~Gv~risiGvQS~~d~~L~~~~-R~~~~~~~~~ai~~l~~~~~~i~~dlI~GlPgq 779 (956)
....+++.+.-..++ .|..++..|-.++++.+-+ +++-+.+- +..+.++=.+|++.++++|+.+.+.+.==+|++
T Consensus 192 ~~~~v~i~TKs~lid--~L~~l~~~~~v~V~~Sitt--~~l~r~~EP~aps~~~RL~Ai~~l~~aGipv~v~iaPIiP~~ 267 (368)
T 4fhd_A 192 DYGRLRFVTKYEHVD--HLLDARHNGKTRFRFSINS--RYVINHFEPGTSSFDGRLAAARKVAGAGYKLGFVVAPIYRHE 267 (368)
T ss_dssp SSEEEEEEESCCCCG--GGTTCCCTTCEEEEEEECC--HHHHHHHCTTSCCHHHHHHHHHHHHHTTCEEEEEEEEECCCT
T ss_pred CCceEEEEeCCcCHH--HHHhcCcCCceEEEEEEcC--HHHHHHcCCCCCCHHHHHHHHHHHHHCCCeEEEEEeCcCCCC
Confidence 334677766444442 3444444455566665544 67777776 456888999999999999998887776668887
Q ss_pred CH-HHHHHHHHHHHc
Q psy2378 780 TL-SELMLDLNYAIQ 793 (956)
Q Consensus 780 T~-e~~~~tl~~~~~ 793 (956)
+. +++.+.++.+.+
T Consensus 268 ~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 268 GWERGYFELFQELAR 282 (368)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 64 677777776654
No 320
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=94.68 E-value=0.11 Score=58.25 Aligned_cols=127 Identities=13% Similarity=0.229 Sum_probs=91.3
Q ss_pred CEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccC
Q psy2378 65 PIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 142 (956)
|+-..+. +.+++++++.|+.+.+.||..+-+..| | ..+ .+.+++||+++ ++.+.+-.-.+
T Consensus 151 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~~~~~l~vDaN~~ 212 (386)
T 1wue_A 151 PVGISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIR-P-------------GYD----VEPVALIRQHFPNLPLMVDANSA 212 (386)
T ss_dssp ECCEEECCCSCHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBS----HHHHHHHHHHCTTSCEEEECTTC
T ss_pred EeeEEecCCCCHHHHHHHHHHHHHhhhheEEEeeC-c-------------HHH----HHHHHHHHHhCCCCeEEEeCCCC
Confidence 3333443 347999999998888889999998654 2 123 35567777776 34455554455
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+. +++ ++++.|++.++.+|. +. .++.||+..+++++.. ++||.+.=.+.+.+++.++
T Consensus 213 ~~~----~~a-~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~ 270 (386)
T 1wue_A 213 YTL----ADL-PQLQRLDHYQLAMIE---------------QP-FAADDFLDHAQLQREL-KTRICLDENIRSLKDCQVA 270 (386)
T ss_dssp CCG----GGH-HHHHGGGGSCCSCEE---------------CC-SCTTCSHHHHHHHTTC-SSCEEECTTCCSHHHHHHH
T ss_pred CCH----HHH-HHHHHHHhCCCeEEe---------------CC-CCcccHHHHHHHHHhc-CCCEEeCCccCCHHHHHHH
Confidence 653 346 788899998887772 11 2245888899999887 6999998889999999999
Q ss_pred hhh--cCEEEE
Q psy2378 223 LNY--IDGVML 231 (956)
Q Consensus 223 l~~--ad~Vmi 231 (956)
++. +|.|.+
T Consensus 271 i~~~a~d~i~i 281 (386)
T 1wue_A 271 LALGSCRSINL 281 (386)
T ss_dssp HHHTCCSEEEE
T ss_pred HHcCCCCEEEE
Confidence 976 998887
No 321
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=94.66 E-value=0.19 Score=56.27 Aligned_cols=120 Identities=9% Similarity=0.023 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCc--cEEEEeccCCCCCCcHHHH
Q psy2378 75 PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI--DITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 75 ~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~--pv~vKir~g~~~~~~~~~~ 152 (956)
+++.++.++...+.||..+-+..|- +++.-.+.++++|++++- ++.|-.-.+|+ .+++
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~----~~~A 204 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYT----VTEA 204 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCC----HHHH
T ss_pred HHHHHHHHHHHHHhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccC----HHHH
Confidence 3445555555566799998886541 355566788999998854 44444344554 3568
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVM 230 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~Vm 230 (956)
+++++.|++.|+.+|- +. .++.|++..+++++.. ++||.+.=.+.+..++.++++. +|.|+
T Consensus 205 ~~~~~~l~~~~i~~iE---------------eP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ 267 (378)
T 4hpn_A 205 ITLGDRAAGFGIDWFE---------------EP-VVPEQLDAYARVRAGQ-PIPVAGGETWHGRYGMWQALSAGAVDILQ 267 (378)
T ss_dssp HHHHHHHGGGCCSCEE---------------CC-SCTTCHHHHHHHHHHS-SSCEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred HHHHhhhhhcccchhh---------------cC-CCccchhhhHHHHhhC-CceeeCCcCccchHhHHHHHHcCCCCEEe
Confidence 8999999999988772 11 2346899999999998 6999998899999999999986 89875
Q ss_pred E
Q psy2378 231 L 231 (956)
Q Consensus 231 i 231 (956)
+
T Consensus 268 ~ 268 (378)
T 4hpn_A 268 P 268 (378)
T ss_dssp C
T ss_pred e
Confidence 4
No 322
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=94.64 E-value=0.26 Score=52.08 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
.+++...+-|+...+.|+|.||||+|.+ ....++.+.+++..+++.+++|++|-..-
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~------------~v~~~ee~~rvv~~i~~~~~~pisIDT~~----------- 78 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPA------------VQDKVSAMEWLVEVTQEVSNLTLCLDSTN----------- 78 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECSC-----------
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCC------------CCChHHHHHHHHHHHHHhCCCeEEEeCCC-----------
Confidence 4677778888888889999999998532 23457788888888888778999886431
Q ss_pred HHHHHHHHHc--CCCEEE-EcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE
Q psy2378 153 RDFVGTVSSA--GCRTFI-VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 209 (956)
Q Consensus 153 ~~~a~~l~~~--G~~~i~-vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~ 209 (956)
.+++++..++ |++.|. |++.. .+++.+.++.+.. +.|+++
T Consensus 79 ~~v~~aAl~a~~Ga~iINdvs~~~----------------d~~~~~~~~~a~~-~~~vvl 121 (262)
T 1f6y_A 79 IKAIEAGLKKCKNRAMINSTNAER----------------EKVEKLFPLAVEH-GAALIG 121 (262)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSCH----------------HHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCc----------------ccHHHHHHHHHHh-CCcEEE
Confidence 2556666666 999996 66532 2444455565666 789887
No 323
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.56 E-value=0.64 Score=49.04 Aligned_cols=124 Identities=10% Similarity=-0.045 Sum_probs=80.8
Q ss_pred ccCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEE
Q psy2378 58 DFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDIT 136 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~ 136 (956)
..+..+.|+ +-+..-|.. .|+.++++|||.| += |-...+ ..-||-..+.-..+.+..-+++|++.++ .||.
T Consensus 23 ~~~~~g~~i-~m~tayDa~----sA~l~e~aG~d~i-lv-GdSl~~-~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vv 94 (275)
T 3vav_A 23 AMREAGEKI-AMLTCYDAS----FAALLDRANVDVQ-LI-GDSLGN-VLQGQTTTLPVTLDDIAYHTACVARAQPRALIV 94 (275)
T ss_dssp HHHHHTCCE-EEEECCSHH----HHHHHHHTTCSEE-EE-CTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEE
T ss_pred HHHHCCCcE-EEEeCcCHH----HHHHHHHcCCCEE-EE-CcHHHH-HHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEE
Confidence 334445554 345455543 5677889999999 42 211111 1123333334456677777888888884 8999
Q ss_pred EEeccC-CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEe
Q psy2378 137 VKHRIG-IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 210 (956)
Q Consensus 137 vKir~g-~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~n 210 (956)
+-+..| + . +.++..+-+.++.++|+++|.+-+.. ...+.|+.+.+. .|||++.
T Consensus 95 aD~pfgsY-~--s~~~a~~~a~rl~kaGa~aVklEdg~----------------~~~~~i~~l~~~--GIpv~gH 148 (275)
T 3vav_A 95 ADLPFGTY-G--TPADAFASAVKLMRAGAQMVKFEGGE----------------WLAETVRFLVER--AVPVCAH 148 (275)
T ss_dssp EECCTTSC-S--SHHHHHHHHHHHHHTTCSEEEEECCG----------------GGHHHHHHHHHT--TCCEEEE
T ss_pred EecCCCCC-C--CHHHHHHHHHHHHHcCCCEEEECCch----------------hHHHHHHHHHHC--CCCEEEe
Confidence 999985 6 2 23467788888888999999998754 235677888775 6999875
No 324
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.45 E-value=0.21 Score=53.76 Aligned_cols=175 Identities=9% Similarity=0.050 Sum_probs=102.4
Q ss_pred ccCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEE
Q psy2378 58 DFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITV 137 (956)
Q Consensus 58 ~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v 137 (956)
..+..+.|+ +=+...|+- .|+.++++|||+|=+--++ .... -|+-....-..+.+...+++|.+.++.||.+
T Consensus 23 ~l~~~~~~i-~~~~ayD~~----sA~l~e~aG~dai~vs~~s-~a~~--~G~pD~~~vt~~em~~~~~~I~r~~~~pvia 94 (305)
T 3ih1_A 23 ALVEANEIL-QIPGAHDAM----AALVARNTGFLALYLSGAA-YTAS--KGLPDLGIVTSTEVAERARDLVRATDLPVLV 94 (305)
T ss_dssp HHHHSSSCE-EEEBCSSHH----HHHHHHHTTCSCEEECHHH-HHHH--HTCCSSSCSCHHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHhCCCcE-EEecCcCHH----HHHHHHHcCCCEEEECcHH-HHHh--CCCCCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 334444543 334455554 5677888999999884210 0011 1222222335666777778888888999999
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccc-cccCCCCCCCCCCcC--cHHHHHHHHHhCCCceEEEecCCC
Q psy2378 138 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPIL--KYNFVYNLKKDFPELEIIINGGIK 214 (956)
Q Consensus 138 Kir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~~--~~~~i~~v~~~~~~ipVi~nGgI~ 214 (956)
-+..|+.+ .++..+.++.++++|+++|++-+.... ..|+.+. ...-+. ..+.|+.++++ ++++..+++..
T Consensus 95 D~d~Gyg~---~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~g--k~l~~~~e~~~rI~Aa~~A--~~~~~I~ARtd 167 (305)
T 3ih1_A 95 DIDTGFGG---VLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNG--KKLVTTEELVQKIKAIKEV--APSLYIVARTD 167 (305)
T ss_dssp ECTTCSSS---HHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTC--CCBCCHHHHHHHHHHHHHH--CTTSEEEEEEC
T ss_pred ECCCCCCC---HHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCC--CcccCHHHHHHHHHHHHHc--CCCeEEEEeec
Confidence 99999743 245778899999999999999876420 0111110 111111 12345555555 35556666654
Q ss_pred CH---------HHHHHHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 215 TK---------KEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 215 s~---------~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
.. +.++.+.+. ||+|++= .+.++..+.++.+.+
T Consensus 168 a~~~~g~~~ai~Ra~ay~eAGAD~i~~e--~~~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 168 ARGVEGLDEAIERANAYVKAGADAIFPE--ALQSEEEFRLFNSKV 210 (305)
T ss_dssp CHHHHCHHHHHHHHHHHHHHTCSEEEET--TCCSHHHHHHHHHHS
T ss_pred cccccCHHHHHHHHHHHHHcCCCEEEEc--CCCCHHHHHHHHHHc
Confidence 43 223333334 9999982 345677778877755
No 325
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=94.45 E-value=0.2 Score=57.21 Aligned_cols=120 Identities=12% Similarity=0.229 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 150 (956)
.+|+++++.|+.+.+ .||..+-|..|.. +++.-.+.+++||+++ +.++.|---.+|+ .+
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~----~~ 247 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWT----VE 247 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSC----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCC----HH
Confidence 689999999988765 5999999875431 3455567788898887 3455555444565 35
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 228 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~ 228 (956)
+++++++.|++. +.+| ++.. .+++..+++++.. ++||.+.=.+.+..++.++++. +|.
T Consensus 248 ~Ai~~~~~L~~~-l~~i---------------EeP~---~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~di 307 (441)
T 3vc5_A 248 TSIRVGRALDGV-LEYL---------------EDPT---PGIDGMARVAAEV-PMPLATNMCVVTPEHLPAAVERRPIGV 307 (441)
T ss_dssp HHHHHHHHTTTT-CSEE---------------ECCS---SSHHHHHHHHTTS-SSCEEESSSCCSGGGHHHHHHHCCCSE
T ss_pred HHHHHHHHHHHH-HHHh---------------hccC---CCHHHHHHHHhcC-CCCEEeCCCCCCHHHHHHHHHhCCCCE
Confidence 688999999887 7776 2221 3788889999987 6999988789999999999986 998
Q ss_pred EEE
Q psy2378 229 VML 231 (956)
Q Consensus 229 Vmi 231 (956)
|.+
T Consensus 308 i~~ 310 (441)
T 3vc5_A 308 LLI 310 (441)
T ss_dssp EEE
T ss_pred Eee
Confidence 875
No 326
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.40 E-value=0.25 Score=51.00 Aligned_cols=118 Identities=10% Similarity=-0.048 Sum_probs=84.8
Q ss_pred HHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh
Q psy2378 122 DCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD 201 (956)
Q Consensus 122 eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~ 201 (956)
++++.+++. ||..=+|.... ++..+++++|.+.|+..|.+.-|+ +...+.++++++.
T Consensus 26 ~~~~~l~~~---~vv~Vir~~~~-----~~a~~~a~al~~gGi~~iEvt~~t---------------~~a~e~I~~l~~~ 82 (232)
T 4e38_A 26 TINNQLKAL---KVIPVIAIDNA-----EDIIPLGKVLAENGLPAAEITFRS---------------DAAVEAIRLLRQA 82 (232)
T ss_dssp HHHHHHHHH---CEEEEECCSSG-----GGHHHHHHHHHHTTCCEEEEETTS---------------TTHHHHHHHHHHH
T ss_pred HHHHHHHhC---CEEEEEEcCCH-----HHHHHHHHHHHHCCCCEEEEeCCC---------------CCHHHHHHHHHHh
Confidence 455555543 45444676321 347899999999999999998776 2457889999998
Q ss_pred CCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhccCCCCCCCCCHHHHHHHH
Q psy2378 202 FPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINLD 268 (956)
Q Consensus 202 ~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~~~~~~~~~~~~~e~~~~~ 268 (956)
+|+ .+++.|.|.+.++++.+++. ||+|+..- .||.+.+..++. +-...+...|..|+...+
T Consensus 83 ~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~---~~~~vi~~~~~~--gi~~ipGv~TptEi~~A~ 144 (232)
T 4e38_A 83 QPE-MLIGAGTILNGEQALAAKEAGATFVVSPG---FNPNTVRACQEI--GIDIVPGVNNPSTVEAAL 144 (232)
T ss_dssp CTT-CEEEEECCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHH--TCEEECEECSHHHHHHHH
T ss_pred CCC-CEEeECCcCCHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHc--CCCEEcCCCCHHHHHHHH
Confidence 865 78999999999999999998 99998753 477777666542 222111235777777654
No 327
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=94.11 E-value=0.17 Score=55.57 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcC--CCEEEEcccccccccCCCCCCCCCCcCcHHH
Q psy2378 117 PLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAG--CRTFIVHARNAFLKKLNPKQNRKIPILKYNF 194 (956)
Q Consensus 117 ~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G--~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~ 194 (956)
++...+.++.+++. +.|+++-+ |+.. +..+.++.+.++| ++++.++... | .+...|+.
T Consensus 80 ~~~~~~~i~~~~~~-g~~v~v~~--g~~~-----~~~~~a~~~~~~g~~~~~i~i~~~~----G--------~~~~~~~~ 139 (336)
T 1ypf_A 80 PEKRISFIRDMQSR-GLIASISV--GVKE-----DEYEFVQQLAAEHLTPEYITIDIAH----G--------HSNAVINM 139 (336)
T ss_dssp GGGHHHHHHHHHHT-TCCCEEEE--CCSH-----HHHHHHHHHHHTTCCCSEEEEECSS----C--------CSHHHHHH
T ss_pred CHHHHHHHHHHHhc-CCeEEEeC--CCCH-----HHHHHHHHHHhcCCCCCEEEEECCC----C--------CcHHHHHH
Confidence 34456667776653 66887774 4322 2346688899999 9999886421 1 12357899
Q ss_pred HHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEc
Q psy2378 195 VYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 195 i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiG 232 (956)
++.+++.++.+||+ .|.|.++++|+++.+. ||+|.++
T Consensus 140 i~~lr~~~~~~~vi-~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 140 IQHIKKHLPESFVI-AGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp HHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHhCCCCEEE-ECCcCCHHHHHHHHHcCCCEEEEe
Confidence 99999998544555 5778999999999988 9999994
No 328
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.01 E-value=0.099 Score=55.64 Aligned_cols=75 Identities=9% Similarity=0.081 Sum_probs=61.4
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++|+..++.|+++|+|..-..+++| .++.+.++++.+ ++||+..+-|.++.++.++.+. ||+|.
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~~f~G------------s~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~Vl 140 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQRRFQG------------SLDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLL 140 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGGGHHH------------HHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEecChhhcCC------------CHHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEE
Confidence 578999999999999999754433333 467888999887 8999999999999888888877 99999
Q ss_pred EccccccCC
Q psy2378 231 LGREAYKNP 239 (956)
Q Consensus 231 iGR~~l~~P 239 (956)
++-+.+.++
T Consensus 141 Li~a~l~~~ 149 (272)
T 3qja_A 141 LIVAALEQS 149 (272)
T ss_dssp EEGGGSCHH
T ss_pred EecccCCHH
Confidence 988777643
No 329
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.99 E-value=0.93 Score=48.56 Aligned_cols=157 Identities=12% Similarity=0.081 Sum_probs=92.8
Q ss_pred HHHHHHHcCCCEEEecC-CCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTV 159 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~-gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l 159 (956)
.|+.++++|||+|=+-- ++- + ..-|+-....-..+.+...++.|.+.++.||.+-+..|+.+ .++..+.++.+
T Consensus 34 sA~l~e~aGf~ai~vs~~s~a--~-~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~---~~~v~~~v~~l 107 (298)
T 3eoo_A 34 AAKMAEAVGFKAVYLSGGGVA--A-NSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGG---AFNIARTIRSF 107 (298)
T ss_dssp HHHHHHHHTCSCEEECHHHHH--H-HTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSS---HHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHH--H-HhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCC---HHHHHHHHHHH
Confidence 45567788999998732 111 0 00111111233567777788888888899999999999742 34577889999
Q ss_pred HHcCCCEEEEcccccc-cccCCCCCCCCCCcCcH-HHHHHH---HHhCCCceEEEecCCCCH--HHHH-------HHhhh
Q psy2378 160 SSAGCRTFIVHARNAF-LKKLNPKQNRKIPILKY-NFVYNL---KKDFPELEIIINGGIKTK--KEID-------LHLNY 225 (956)
Q Consensus 160 ~~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~~~~-~~i~~v---~~~~~~ipVi~nGgI~s~--~da~-------~~l~~ 225 (956)
+++|+++|++-..... ..|+.+ ... -... +.+.+| +++..+.+++.+++.... +..+ .+.+.
T Consensus 108 ~~aGaagv~iEDq~~~k~cGh~~--gk~--l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~A 183 (298)
T 3eoo_A 108 IKAGVGAVHLEDQVGQKRCGHRP--GKE--CVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEA 183 (298)
T ss_dssp HHTTCSEEEEECBCCCCCTTCCC--CCC--BCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCeEEEECCCCCCcccCCCC--CCe--ecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhc
Confidence 9999999999865420 011111 011 1122 334444 333323455556655443 2222 23333
Q ss_pred -cCEEEEccccccCCcchHHHHHhh
Q psy2378 226 -IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 226 -ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
||+|++= .+.++..+.++.+.+
T Consensus 184 GAD~if~~--~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 184 GADMIFPE--AMKTLDDYRRFKEAV 206 (298)
T ss_dssp TCSEEEEC--CCCSHHHHHHHHHHH
T ss_pred CCCEEEeC--CCCCHHHHHHHHHHc
Confidence 9999883 346888888887765
No 330
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=93.98 E-value=0.7 Score=48.05 Aligned_cols=96 Identities=9% Similarity=0.057 Sum_probs=67.9
Q ss_pred CEEEEecC-CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccC
Q psy2378 65 PIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g-~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g 142 (956)
++.+-|.| .+.+++...++.+.+.|+|.||+=. |-+... +++.+.+.++.+|+.. ++|+.+=+|..
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRv---------D~l~~~---~~~~v~~~~~~lr~~~~~~PiI~T~R~~ 72 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRI---------DQFENV---TVDQVAEMITKLKVMQDSFKLLVTYRTK 72 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEEC---------TTSTTC---CHHHHHHHHHHHC---CCSEEEEECCBG
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEe---------cccccC---CHHHHHHHHHHHHHhccCCCEEEEeecc
Confidence 47899999 9999999988888889999999943 333211 4788999999999887 78999999885
Q ss_pred CCCC---CcHHHHHHHHHHHHHc-CCCEEEEccc
Q psy2378 143 IDDI---NSYDFVRDFVGTVSSA-GCRTFIVHAR 172 (956)
Q Consensus 143 ~~~~---~~~~~~~~~a~~l~~~-G~~~i~vh~r 172 (956)
++.+ .+.++..++.+.+.+. |+++|.|.-.
T Consensus 73 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~ 106 (238)
T 1sfl_A 73 LQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQ 106 (238)
T ss_dssp GGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 5433 2234566777777776 6999999754
No 331
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=93.96 E-value=0.24 Score=51.04 Aligned_cols=142 Identities=18% Similarity=0.164 Sum_probs=84.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEe
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKH 139 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKi 139 (956)
+.++++=+- ...|+.++++ +.++|+|.|-+|..++ .+.+.+.++.+++.-. ..+.|-+
T Consensus 58 ~~~iflDlKl~Dip~t~~~~---~~~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~ 118 (221)
T 3exr_A 58 DKIIVADTKCADAGGTVAKN---NAVRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVEL 118 (221)
T ss_dssp TSEEEEEEEECSCHHHHHHH---HHTTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEEC
T ss_pred CCcEEEEEEeeccHHHHHHH---HHHcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEE
Confidence 345554332 3668877766 4678999999997432 3345666666665421 2233322
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccc-cccccCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARN-AFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKK 217 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~-~~~~g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~ 217 (956)
-.+++ . +-++.+.+.|++.+.+|-.. ....| . + .....+..+++.. +++++...||| +++
T Consensus 119 lts~~----~----~~~~~~~~~~~~~~v~~~a~~~~~~G---v----v--~s~~e~~~ir~~~~~~~~i~v~gGI-~~~ 180 (221)
T 3exr_A 119 YGDWT----Y----DQAQQWLDAGISQAIYHQSRDALLAG---E----T--WGEKDLNKVKKLIEMGFRVSVTGGL-SVD 180 (221)
T ss_dssp CSSCC----H----HHHHHHHHTTCCEEEEECCHHHHHHT---C----C--CCHHHHHHHHHHHHHTCEEEEESSC-CGG
T ss_pred cCCCC----H----HHHHHHHcCCHHHHHHHHHHhcCCCc---c----c--cCHHHHHHHHHhhcCCceEEEECCC-CHH
Confidence 22222 1 22345567899998887432 11112 1 1 1223344554432 25789999999 578
Q ss_pred HHHHHhhh-cCEEEEccccccCCcc
Q psy2378 218 EIDLHLNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 218 da~~~l~~-ad~VmiGR~~l~~P~l 241 (956)
++.++... ||.+.+||++...++-
T Consensus 181 ~~~~~~~aGad~~VvG~~I~~a~dp 205 (221)
T 3exr_A 181 TLKLFEGVDVFTFIAGRGITEAKNP 205 (221)
T ss_dssp GGGGGTTCCCSEEEECHHHHTSSSH
T ss_pred HHHHHHHCCCCEEEECchhhCCCCH
Confidence 88777776 9999999998875543
No 332
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=93.85 E-value=0.26 Score=54.22 Aligned_cols=124 Identities=12% Similarity=0.235 Sum_probs=90.8
Q ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCc
Q psy2378 69 QVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINS 148 (956)
Q Consensus 69 Ql~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~ 148 (956)
.+...+|+++++.|+...+ ||..+-+..|.+ . -.+.+++||++++.++.+-.-.+|++
T Consensus 129 ~~~~~~~e~~~~~a~~~~~-g~~~~K~Kvg~~--------------~----d~~~v~avR~~~~~~l~vDaN~~~t~--- 186 (338)
T 3ijl_A 129 TIGIDTPDVVRAKTKECAG-LFNILKVKLGRD--------------N----DKEMIETIRSVTDLPIAVDANQGWKD--- 186 (338)
T ss_dssp BCCCCCHHHHHHHHHHHHT-TCSSEEEECSSS--------------C----HHHHHHHHHTTCCCCEEEECTTCCCC---
T ss_pred EEeCCCHHHHHHHHHHHHh-cccEEEEecCcH--------------H----HHHHHHHHHhhcCCcEEEECcCCCCC---
Confidence 4556789999998887766 899998876531 1 35678899988765555444445531
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcCE
Q psy2378 149 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDG 228 (956)
Q Consensus 149 ~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad~ 228 (956)
.+++.++++.|++.++.+|. +. .++.|++..+++++.. ++||.+-=.+.+..++.+++..+|.
T Consensus 187 ~~~A~~~~~~l~~~~i~~iE---------------eP-~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~~a~d~ 249 (338)
T 3ijl_A 187 RQYALDMIHWLKEKGIVMIE---------------QP-MPKEQLDDIAWVTQQS-PLPVFADESLQRLGDVAALKGAFTG 249 (338)
T ss_dssp HHHHHHHHHHHHHTTEEEEE---------------CC-SCTTCHHHHHHHHHTC-SSCEEESTTCCSGGGTGGGBTTBSE
T ss_pred HHHHHHHHHHHhhCCCCEEE---------------CC-CCCCcHHHHHHHHhcC-CCCEEECCCCCCHHHHHHHHhhCCE
Confidence 34688999999999877661 11 2345899999999987 6999998889999988877633888
Q ss_pred EEE
Q psy2378 229 VML 231 (956)
Q Consensus 229 Vmi 231 (956)
|.+
T Consensus 250 i~~ 252 (338)
T 3ijl_A 250 INI 252 (338)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 333
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=93.84 E-value=0.14 Score=54.43 Aligned_cols=73 Identities=7% Similarity=0.069 Sum_probs=59.5
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++|+..+++|+++|+|-.-..+.+| ..+.+.++++.+ ++||+..+.|.++.++.++... ||+|.
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~G------------s~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~Vl 147 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQG------------APEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCIL 147 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCC------------CHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCC------------CHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEE
Confidence 578999999999999988543222222 567888999888 8999999999999999988877 99999
Q ss_pred Ecccccc
Q psy2378 231 LGREAYK 237 (956)
Q Consensus 231 iGR~~l~ 237 (956)
++-.++.
T Consensus 148 Li~a~L~ 154 (272)
T 3tsm_A 148 IIMASVD 154 (272)
T ss_dssp EETTTSC
T ss_pred EcccccC
Confidence 9887764
No 334
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.83 E-value=0.17 Score=53.35 Aligned_cols=73 Identities=7% Similarity=0.000 Sum_probs=59.4
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..++|+..+++|+++|+|-.-....+ -..+.+..+++.+ ++||..-+.|.++.++.++++. ||+|.
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f~------------G~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~Vl 133 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRFG------------GSLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAAL 133 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSSC------------CCHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEecchhhhc------------cCHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEE
Confidence 67999999999999999843221111 1567788888888 8999999999999889888877 99999
Q ss_pred Ecccccc
Q psy2378 231 LGREAYK 237 (956)
Q Consensus 231 iGR~~l~ 237 (956)
++-..+.
T Consensus 134 L~~~~l~ 140 (254)
T 1vc4_A 134 LIVALLG 140 (254)
T ss_dssp EEHHHHG
T ss_pred ECccchH
Confidence 9988776
No 335
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=93.58 E-value=0.83 Score=47.15 Aligned_cols=143 Identities=12% Similarity=0.111 Sum_probs=83.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 141 (956)
+.++++=+- +.-|+....+++.+.++|+|.|-+|..+ + .+.+...++.+++. +.-|++=...
T Consensus 64 g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~-----------G-----~~~l~~~~~~~~~~-g~~v~vLt~~ 126 (228)
T 3m47_A 64 GCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFP-----------G-----ADSVRACLNVAEEM-GREVFLLTEM 126 (228)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT-----------C-----HHHHHHHHHHHHHH-TCEEEEECCC
T ss_pred CCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccC-----------C-----HHHHHHHHHHHHhc-CCCeEEEEeC
Confidence 456665553 4556666777777788999999998532 1 23455555555432 3345553333
Q ss_pred CCCCC-Cc-HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCC-ceEEEecCCCCHH-
Q psy2378 142 GIDDI-NS-YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKK- 217 (956)
Q Consensus 142 g~~~~-~~-~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~-ipVi~nGgI~s~~- 217 (956)
...+. +. .+....+++...+.|++.+.+.+. .-+.++++++..++ .++ ..+||. ++
T Consensus 127 s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at------------------~~~e~~~ir~~~~~~~~i-v~PGI~-~~g 186 (228)
T 3m47_A 127 SHPGAEMFIQGAADEIARMGVDLGVKNYVGPST------------------RPERLSRLREIIGQDSFL-ISPGVG-AQG 186 (228)
T ss_dssp CSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSS------------------CHHHHHHHHHHHCSSSEE-EECC------
T ss_pred CCccHHHHHHHHHHHHHHHHHHhCCcEEEECCC------------------ChHHHHHHHHhcCCCCEE-EecCcC-cCC
Confidence 22111 11 123456788888999998776542 12346677776543 555 667775 33
Q ss_pred -HHHHHhhh-cCEEEEccccccCCcchH
Q psy2378 218 -EIDLHLNY-IDGVMLGREAYKNPFLMS 243 (956)
Q Consensus 218 -da~~~l~~-ad~VmiGR~~l~~P~l~~ 243 (956)
+. +.++. +|.+.+||+.+..++...
T Consensus 187 ~~p-~~~~aGad~iVvGr~I~~a~dp~~ 213 (228)
T 3m47_A 187 GDP-GETLRFADAIIVGRSIYLADNPAA 213 (228)
T ss_dssp -----CGGGTCSEEEECHHHHTSSCHHH
T ss_pred CCH-hHHHcCCCEEEECHHHhCCCCHHH
Confidence 45 66666 999999999887655443
No 336
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=93.54 E-value=0.28 Score=50.24 Aligned_cols=140 Identities=11% Similarity=0.193 Sum_probs=90.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 141 (956)
+.++++=+= +.-|.-.+.+++.+.++ +|.|-+|..... ...++ +... +.-|++-.+.
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~---------~~~~~----------~~~~--~~~v~vLts~ 107 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGV---------EGSLA----------SLSQ--RVDLFLVLSM 107 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCT---------TTTHH----------HHHH--HSEEEEECCC
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCc---------HHHHH----------hHhc--CCCEEEEEec
Confidence 567776664 55566677788888888 999999853220 11111 1111 2235555555
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH--HH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK--EI 219 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~--da 219 (956)
+..+.. .+....+++..+++|++.+.+++. ..+.+..+++..++ .++..+||. ++ +.
T Consensus 108 s~~~~~-~~~v~~~a~~a~~~G~~GvV~sat------------------~~~e~~~ir~~~~~-f~~v~pGI~-~~g~~~ 166 (215)
T 3ve9_A 108 SHPGWN-DAFYPYLREVARRVNPKGFVAPAT------------------RPSMISRVKGDFPD-KLVISPGVG-TQGAKP 166 (215)
T ss_dssp SSTTCC-GGGHHHHHHHHHHHCCSEEECCTT------------------SHHHHHHHHHHCTT-SEEEECCTT-STTCCT
T ss_pred CCcchH-HHHHHHHHHHHHHcCCCceeeCCC------------------CHHHHHHHHHhCCC-cEEEcCCCC-cCcCCH
Confidence 433211 123678899999999998877542 23457788888877 788889997 34 56
Q ss_pred HHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 220 DLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 220 ~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
.++++. +|.+.+||+.+..++-...+
T Consensus 167 ~~a~~~Gad~iVvGr~I~~a~dp~~a~ 193 (215)
T 3ve9_A 167 GIALCHGADYEIVGRSVYQSADPVRKL 193 (215)
T ss_dssp THHHHTTCSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHcCCCEEEeCHHHcCCCCHHHHH
Confidence 666666 99999999998866654333
No 337
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.51 E-value=0.32 Score=50.24 Aligned_cols=133 Identities=15% Similarity=0.174 Sum_probs=85.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEec
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 140 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~--gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 140 (956)
...++.+|...|...+.+.++.+.++|+|.|++-. |.-.++ ..+-.++++++++.++.|+.|-+=
T Consensus 6 ~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~-------------~~~~~~~~~~lr~~~~~~~~v~lm 72 (228)
T 1h1y_A 6 AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPN-------------LTIGAPVIQSLRKHTKAYLDCHLM 72 (228)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC-------------BCBCHHHHHHHHTTCCSEEEEEEE
T ss_pred CCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcc-------------hhhCHHHHHHHHhhcCCcEEEEEE
Confidence 44578899999999999999999999999877742 221111 111236777888877667765554
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCc-HHHHHHHHHhCCCceEEEecCCCC-HHH
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNLKKDFPELEIIINGGIKT-KKE 218 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~-~~~i~~v~~~~~~ipVi~nGgI~s-~~d 218 (956)
.. +. . ++++.+.++|+|.+++|+... +.. .+.++++++. ++.++..=.-.+ .+.
T Consensus 73 v~-d~-~------~~i~~~~~agad~v~vH~~~~--------------~~~~~~~~~~i~~~--g~~igv~~~p~t~~e~ 128 (228)
T 1h1y_A 73 VT-NP-S------DYVEPLAKAGASGFTFHIEVS--------------RDNWQELIQSIKAK--GMRPGVSLRPGTPVEE 128 (228)
T ss_dssp SS-CG-G------GGHHHHHHHTCSEEEEEGGGC--------------TTTHHHHHHHHHHT--TCEEEEEECTTSCGGG
T ss_pred ec-CH-H------HHHHHHHHcCCCEEEECCCCc--------------ccHHHHHHHHHHHc--CCCEEEEEeCCCCHHH
Confidence 42 21 1 345666779999999998641 123 4556777664 455543333333 345
Q ss_pred HHHHhh---hcCEEEEc
Q psy2378 219 IDLHLN---YIDGVMLG 232 (956)
Q Consensus 219 a~~~l~---~ad~VmiG 232 (956)
++.++. .+|.|.++
T Consensus 129 ~~~~~~~~~~~d~vl~~ 145 (228)
T 1h1y_A 129 VFPLVEAENPVELVLVM 145 (228)
T ss_dssp GHHHHHSSSCCSEEEEE
T ss_pred HHHHHhcCCCCCEEEEE
Confidence 666777 68999884
No 338
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=93.39 E-value=0.23 Score=57.08 Aligned_cols=121 Identities=10% Similarity=0.081 Sum_probs=85.1
Q ss_pred CCCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~ 149 (956)
+.+|+++++.|+.+.+ .||..|-+..|.+ +++.-.+.+++||+++ +.++.|-.-.+|+ .
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~----~ 258 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFPHARVTLDPNGAWS----L 258 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBC----H
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCC----H
Confidence 3689999999988776 6999999987642 2344456788888876 3334443333454 3
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCc----HHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK----YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~----~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
++++++++.|++. +.+|. +. .++.+ ++..+++++.. ++||.+.=.+.++.++.++++.
T Consensus 259 ~~Ai~~~~~Le~~-l~~iE---------------eP-~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~ 320 (470)
T 3p0w_A 259 NEAIALCKGQGHL-VAYAE---------------DP-CGPEAGYSGREVMAEFKRAT-GIPTATNMIATDWRQMGHAVQL 320 (470)
T ss_dssp HHHHHHHTTCTTT-CSEEE---------------SC-BCCBTTBCHHHHHHHHHHHH-CCCEEESSSSCSHHHHHHHHHT
T ss_pred HHHHHHHHhcccc-ceeec---------------CC-CChhhccchHHHHHHHHhcC-CCCEEeCCccCCHHHHHHHHHc
Confidence 5678888888876 66652 11 12234 67888999887 6999886677889999999876
Q ss_pred --cCEE
Q psy2378 226 --IDGV 229 (956)
Q Consensus 226 --ad~V 229 (956)
+|.+
T Consensus 321 ~a~div 326 (470)
T 3p0w_A 321 HAVDIP 326 (470)
T ss_dssp TCCSEE
T ss_pred CCCCEE
Confidence 8866
No 339
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=93.32 E-value=0.67 Score=48.00 Aligned_cols=109 Identities=11% Similarity=0.047 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHH
Q psy2378 117 PLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVY 196 (956)
Q Consensus 117 ~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~ 196 (956)
+..+.++++.+...-++=|++---.+..- .......++|+..+++|+.+|.+. ..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~livscq~~~~~pl-~~~~~~~~~A~a~~~~Ga~~i~~~--------------------~~~~i~ 62 (232)
T 3igs_A 4 MSLLEQLDKNIAASGGLIVSCQPVPGSPL-DKPEIVAAMALAAEQAGAVAVRIE--------------------GIDNLR 62 (232)
T ss_dssp CCHHHHHHHHHHHHCCEEEECCCCTTCTT-CSHHHHHHHHHHHHHTTCSEEEEE--------------------SHHHHH
T ss_pred HHHHHHHHHHhhhcCCEEEEEeCCCCCCC-CCcchHHHHHHHHHHCCCeEEEEC--------------------CHHHHH
Confidence 34566677777333344444422222111 223568899999999999998762 346789
Q ss_pred HHHHhCCCceEEEe-----cC--C---CCHHHHHHHhhh-cCEEEEccccccCCcchHHHHH
Q psy2378 197 NLKKDFPELEIIIN-----GG--I---KTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 197 ~v~~~~~~ipVi~n-----Gg--I---~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~ 247 (956)
++++.+ ++||++. || + .+.+++.++++. ||.|.++-++..+|....++.+
T Consensus 63 ~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~ 123 (232)
T 3igs_A 63 MTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLA 123 (232)
T ss_dssp HHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHH
T ss_pred HHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHH
Confidence 999988 8999862 33 2 356788888887 9999999888888866555443
No 340
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=93.26 E-value=0.34 Score=55.50 Aligned_cols=121 Identities=15% Similarity=0.175 Sum_probs=85.3
Q ss_pred CCCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcH
Q psy2378 72 DNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 72 g~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~ 149 (956)
+.+|+++++.|+.+.+ .||..|-+..|.+ +++.-.+.+++||++. +.++.|-.-.+|+ .
T Consensus 180 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~----~ 240 (450)
T 3mzn_A 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFPEARLALDPNGAWK----L 240 (450)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBC----H
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCC----H
Confidence 3579999999988766 6999999976542 2344467788888876 2334333333454 4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCc----HHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK----YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~----~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
++++++++.|++. +.+|. +. .++.+ ++..+++++.. ++||.+.=.+.++.++.++++.
T Consensus 241 ~~A~~~~~~L~~~-i~~iE---------------eP-~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 302 (450)
T 3mzn_A 241 DEAVRVLEPIKHL-LSYAE---------------DP-CGQEGGFSGRETMAEFKKRT-GLPTATNMIATDYKQLQYAVQL 302 (450)
T ss_dssp HHHHHHHGGGGGG-CSEEE---------------SS-BCCBTTBCHHHHHHHHHHHH-CCCEEESSSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhhhc-cceee---------------CC-CCcccccchHHHHHHHHHhc-CCCEEeCCccCCHHHHHHHHHc
Confidence 5688999999887 66662 11 12234 67889999887 6998886567889999999876
Q ss_pred --cCEE
Q psy2378 226 --IDGV 229 (956)
Q Consensus 226 --ad~V 229 (956)
+|.+
T Consensus 303 ~a~di~ 308 (450)
T 3mzn_A 303 NSVDIP 308 (450)
T ss_dssp TCCSEE
T ss_pred CCCCEE
Confidence 8865
No 341
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.25 E-value=0.17 Score=58.12 Aligned_cols=71 Identities=17% Similarity=0.387 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
+..+-++.|.++|+|.|.|..-. |++ ..-.+.++.+++.+|++||| .|+|.|++.++.+++. ||+|
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ah----Ghs--------~~v~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li~aGAD~v 347 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQ----GNS--------VYQIEFIKWIKQTYPKIDVI-AGNVVTREQAAQLIAAGADGL 347 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSC----CCS--------HHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHhcCCcEEEEeccc----ccc--------HHHHHHHHHHHhhCCcceEE-eccccCHHHHHHHHHcCCCEE
Confidence 45678999999999999997543 211 12468899999999888887 6889999999999988 9999
Q ss_pred EEccc
Q psy2378 230 MLGRE 234 (956)
Q Consensus 230 miGR~ 234 (956)
-+|-|
T Consensus 348 kVGiG 352 (556)
T 4af0_A 348 RIGMG 352 (556)
T ss_dssp EECSS
T ss_pred eecCC
Confidence 88776
No 342
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=93.22 E-value=0.56 Score=52.36 Aligned_cols=130 Identities=12% Similarity=0.158 Sum_probs=92.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-C--ccEEEEe
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-E--IDITVKH 139 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~--~pv~vKi 139 (956)
.-|+-..+...+++++++.|+...+.||..+-+..|.. +++.-.+.++++++++ + +++.+-.
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vDa 203 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAADG 203 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEee
Confidence 34566778889999999999988889999999876531 2344456777777766 3 3444444
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHH
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 219 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da 219 (956)
-.+|+ .++++++++.+++.+. ++ ++. -.+++..+++++.. ++||.+-=.+.+..++
T Consensus 204 N~~~~----~~~A~~~~~~l~~~~~-~i---------------EeP---~~~~~~~~~l~~~~-~~pia~dE~~~~~~~~ 259 (376)
T 4h2h_A 204 NRGWT----TRDALRFSRECPDIPF-VM---------------EQP---CNSFEDLEAIRPLC-HHALYMDEDGTSLNTV 259 (376)
T ss_dssp TTCCC----HHHHHHHHHHCTTSCE-EE---------------ESC---SSSHHHHHHHGGGC-CSCEEESTTCCSHHHH
T ss_pred ccCCC----HHHHHHHHHHHhhccc-cc---------------cCC---cchhhhHhhhhhcc-cCccccCcccCCHHHH
Confidence 44554 3567888888877653 32 111 12577788898887 7999888889999999
Q ss_pred HHHhhh--cCEEEE
Q psy2378 220 DLHLNY--IDGVML 231 (956)
Q Consensus 220 ~~~l~~--ad~Vmi 231 (956)
.++++. +|.|.+
T Consensus 260 ~~~~~~~~~d~v~~ 273 (376)
T 4h2h_A 260 ITAAATSLVDGFGM 273 (376)
T ss_dssp HHHHHTTCCSEECC
T ss_pred HHHHHhhccCcccc
Confidence 999986 888754
No 343
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=93.14 E-value=0.34 Score=42.69 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=46.4
Q ss_pred cCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCCEEeeCchhhchHHHH
Q psy2378 898 DGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDL 949 (956)
Q Consensus 898 ~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~~~~lT~~G~~~~~~i 949 (956)
.|+....+....|.+...+...++.|.+.||++...+.+.||++|.-+...+
T Consensus 19 ~~~~~t~La~~~~ls~~~~~~~l~~L~~~GLI~~~~~~~~LT~kG~~~l~~l 70 (95)
T 1r7j_A 19 SGSPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEGKQYMLTKKGEELLEDI 70 (95)
T ss_dssp TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHHHHH
T ss_pred cCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEECCeeEEChhHHHHHHHH
Confidence 3578888999999998888899999999999999999999999999888754
No 344
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=92.94 E-value=1.7 Score=44.65 Aligned_cols=133 Identities=11% Similarity=0.162 Sum_probs=85.1
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 144 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 144 (956)
+..+.++- ++++. +..+++.+.|.|.||.. ..|++ ++.+++..++|+.=-+|....
T Consensus 72 ~~~v~v~v-~~~ei---~~~i~~~~ld~vQLHG~----------------E~~~~----~~~l~~~~~~~viKa~~v~~~ 127 (228)
T 4aaj_A 72 VFLVSTMV-GFSEW---AMAIERTGAQYIQVHSN----------------ALPQT----IDTLKKEFGVFVMKAFRVPTI 127 (228)
T ss_dssp EEEEECCC-CHHHH---HHHHHHHTCSEEEECSC----------------CCHHH----HHHHHHHHCCEEEEEEECCSS
T ss_pred CEEEeccC-chHHH---HHHHHhccchheecccc----------------cCHHH----HHHHhhccCceEEEEEEeccc
Confidence 34555554 46654 44566789999999842 23544 455566667887544666443
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhh
Q psy2378 145 DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLN 224 (956)
Q Consensus 145 ~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~ 224 (956)
.....++...+...+....+|++-+.... | +|. ..||+.+..+... .|+|..||+ +++.+.++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~d~~LlDs~G----G-tG~------~fDW~~~~~~~~~---~p~iLAGGL-~peNV~~Ai~ 192 (228)
T 4aaj_A 128 SKNPEEDANRLLSEISRYNADMVLLDTGA----G-SGK------LHDLRVSSLVARK---IPVIVAGGL-NAENVEEVIK 192 (228)
T ss_dssp CSCHHHHHHHHHHHHHHSCCSEEEEEC------------------CCCHHHHHHHHH---SCEEEESSC-CTTTHHHHHH
T ss_pred ccchhhhHHHHHHHHhccCCCEEccCCCC----C-CcC------cCChHHHHHhhhc---CCeEEECCC-CHHHHHHHHH
Confidence 33333344455566677789999887421 1 222 3699998888664 589999999 5888888887
Q ss_pred h--cCEEEEccccc
Q psy2378 225 Y--IDGVMLGREAY 236 (956)
Q Consensus 225 ~--ad~VmiGR~~l 236 (956)
. ..+|=+..|.=
T Consensus 193 ~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 193 VVKPYGVDVSSGVE 206 (228)
T ss_dssp HHCCSEEEESGGGE
T ss_pred HhCCCEEEeCCCCC
Confidence 5 77887777764
No 345
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=92.92 E-value=1.2 Score=47.69 Aligned_cols=168 Identities=14% Similarity=0.098 Sum_probs=97.7
Q ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcH
Q psy2378 70 VGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSY 149 (956)
Q Consensus 70 l~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~ 149 (956)
+..-|+- .|+.++++|||+|=+--+ ...++ .-|+-....-..+.+...++.|.+.++.||++-+..|+... .
T Consensus 22 ~~a~D~~----sA~~~~~aG~~ai~vs~~-~~a~~-~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~--~ 93 (295)
T 1xg4_A 22 VGTINAN----HALLAQRAGYQAIYLSGG-GVAAG-SLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSS--A 93 (295)
T ss_dssp EECSSHH----HHHHHHHTTCSCEEECHH-HHHHT-TTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSS--H
T ss_pred ecCcCHH----HHHHHHHcCCCEEEECch-Hhhhh-hcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCC--H
Confidence 4445543 467778899999977321 00000 01222223345677888889998889999999999996422 2
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccc-cccCCCCCCCCCCc--CcHHHHHHHHHhCCCceEEEecCCCCH-----H----
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPI--LKYNFVYNLKKDFPELEIIINGGIKTK-----K---- 217 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~--~~~~~i~~v~~~~~~ipVi~nGgI~s~-----~---- 217 (956)
++..+.++.++++|+++|++-..... ..|+.+. ...-| ...+.|+.+++...+.++..+|..... +
T Consensus 94 ~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~g--k~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ 171 (295)
T 1xg4_A 94 FNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPN--KAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIE 171 (295)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSS--CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCC--CccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHH
Confidence 45788899999999999999865420 0111110 00111 122344444444323455566655432 2
Q ss_pred HHHHHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 218 EIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 218 da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
++..+.+. ||+|++= .+.++....++.+.+
T Consensus 172 ra~ay~eAGAd~i~~e--~~~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 172 RAQAYVEAGAEMLFPE--AITELAMYRQFADAV 202 (295)
T ss_dssp HHHHHHHTTCSEEEET--TCCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEe--CCCCHHHHHHHHHHc
Confidence 23333344 9999883 235667788887766
No 346
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=92.76 E-value=1.5 Score=47.08 Aligned_cols=151 Identities=13% Similarity=0.204 Sum_probs=91.7
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccE----EE
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDI----TV 137 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv----~v 137 (956)
+.++++=+= +.-|.....+++.+.++|+|.|-+|.. || ++.+...++..++.-..|. ++
T Consensus 76 g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~-----------~G-----~~~m~aa~e~a~~~~~~~~llaVtv 139 (303)
T 3ru6_A 76 DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHAS-----------AG-----KIAIQEVMTRLSKFSKRPLVLAVSA 139 (303)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG-----------GC-----HHHHHHHHHHHTTSSSCCEEEEECS
T ss_pred CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEecc-----------CC-----HHHHHHHHHHHHhcCCCceEEEEEE
Confidence 556666663 444666667777788899999999852 22 4455556666554322232 22
Q ss_pred EeccCCC------CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 138 KHRIGID------DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 138 Kir~g~~------~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
..+.+.. +....+...++|+...++|++.+..++. . +..+++..++-.++.++
T Consensus 140 LTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~------------------E---~~~IR~~~~~~fl~VTP 198 (303)
T 3ru6_A 140 LTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF------------------E---SKKIKEHTSSNFLTLTP 198 (303)
T ss_dssp CTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT------------------T---HHHHHHHSCTTSEEEEC
T ss_pred ecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH------------------H---HHHHHHhCCCccEEECC
Confidence 2232110 0111233456888888999999866321 2 45777777555688888
Q ss_pred CCCCHH----------HHHHHhhh-cCEEEEccccccCCcch---HHHHHhhc
Q psy2378 212 GIKTKK----------EIDLHLNY-IDGVMLGREAYKNPFLM---SNFDLNYY 250 (956)
Q Consensus 212 gI~s~~----------da~~~l~~-ad~VmiGR~~l~~P~l~---~~i~~~~~ 250 (956)
||.-.. .+.++++. +|.+.+||++...++-. +++++.+.
T Consensus 199 GIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~ 251 (303)
T 3ru6_A 199 GIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIH 251 (303)
T ss_dssp CCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC
T ss_pred CcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 887210 34455556 99999999999866543 44555443
No 347
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=92.64 E-value=1.3 Score=46.83 Aligned_cols=122 Identities=9% Similarity=0.069 Sum_probs=73.4
Q ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEe
Q psy2378 60 NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 139 (956)
Q Consensus 60 ~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 139 (956)
+..+.|+ +-+..-|.- .|+.++++|||.| + .|--..++ .-|+-..+.-..+.+...+++|++.++.|+.+ .
T Consensus 30 k~~g~~i-~~~tayDa~----sA~l~e~aG~d~i-l-vGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-a 100 (281)
T 1oy0_A 30 KADGHKW-AMLTAYDYS----TARIFDEAGIPVL-L-VGDSAANV-VYGYDTTVPISIDELIPLVRGVVRGAPHALVV-A 100 (281)
T ss_dssp HHHTCCE-EEEECCSHH----HHHHHHTTTCCEE-E-ECTTHHHH-TTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-E
T ss_pred HhCCCcE-EEEeCcCHH----HHHHHHHcCCCEE-E-ECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-E
Confidence 3334443 445555543 5677888999999 4 24333222 22333334445677777888888888877655 5
Q ss_pred ccCCCCC-CcHHHHHH-HHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE
Q psy2378 140 RIGIDDI-NSYDFVRD-FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII 208 (956)
Q Consensus 140 r~g~~~~-~~~~~~~~-~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi 208 (956)
-+++-.. .+.+++.+ ..+.++++|+++|.+-+.. ...+.|+.+.+. .|||+
T Consensus 101 D~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~----------------e~~~~I~al~~a--gIpV~ 153 (281)
T 1oy0_A 101 DLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGE----------------RVAEQIACLTAA--GIPVM 153 (281)
T ss_dssp ECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSG----------------GGHHHHHHHHHH--TCCEE
T ss_pred ECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcH----------------HHHHHHHHHHHC--CCCEE
Confidence 5544221 12334444 4555667999999998753 234567777765 58887
No 348
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.63 E-value=0.56 Score=49.79 Aligned_cols=155 Identities=12% Similarity=0.124 Sum_probs=96.5
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVS 160 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~ 160 (956)
.|+.++++|||+|=+--.+ ..+ .-|+-....-..+.+...++.|.+.++.||++-+..|+... .++..+.++.++
T Consensus 28 sA~~~~~aG~~ai~vsg~s-~a~--~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~--~~~~~~~v~~l~ 102 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAG-IAH--ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHA--PEDVRRTVEHFA 102 (275)
T ss_dssp HHHHHHHHTCSCEEECHHH-HHH--HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSS--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHH-HHH--hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCC--HHHHHHHHHHHH
Confidence 4667778899999874110 111 12333333446777888889998889999999999996432 346788899999
Q ss_pred HcCCCEEEEcccccccccCCCCCCCCCCcCc--HHHHHHHHHhCC--CceEEEecCCCC--------H-HHHHHHh----
Q psy2378 161 SAGCRTFIVHARNAFLKKLNPKQNRKIPILK--YNFVYNLKKDFP--ELEIIINGGIKT--------K-KEIDLHL---- 223 (956)
Q Consensus 161 ~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~--~~~i~~v~~~~~--~ipVi~nGgI~s--------~-~da~~~l---- 223 (956)
++|++++++-.... . .++ ..-+.. .+.|+.+++... ++|+..+|.... + +.+++++
T Consensus 103 ~aGaagv~iED~~~-~---~~k---~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ 175 (275)
T 2ze3_A 103 ALGVAGVNLEDATG-L---TPT---ELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQ 175 (275)
T ss_dssp HTTCSEEEEECBCS-S---SSS---CBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHH
T ss_pred HcCCcEEEECCCcC-C---CCC---ccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHH
Confidence 99999999987642 1 111 111111 233444444311 478877887654 1 2233333
Q ss_pred ---hh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 224 ---NY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 224 ---~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
+. ||+|++=- +.++...+++.+.+
T Consensus 176 ay~eAGAd~i~~e~--~~~~~~~~~i~~~~ 203 (275)
T 2ze3_A 176 AYADAGADGIFVPL--ALQSQDIRALADAL 203 (275)
T ss_dssp HHHHTTCSEEECTT--CCCHHHHHHHHHHC
T ss_pred HHHHCCCCEEEECC--CCCHHHHHHHHHhc
Confidence 22 99998732 45667777777755
No 349
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=92.60 E-value=0.52 Score=50.43 Aligned_cols=163 Identities=12% Similarity=0.082 Sum_probs=93.7
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVS 160 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~ 160 (956)
.|+.++++|||+|=+--. ...++ -|+-....-..+.+...++.|.+.++.||.+-+..|+. + .++..+.++.++
T Consensus 27 sA~~~~~aG~~ai~vs~~-~~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg--~-~~~~~~~v~~l~ 100 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGF-ELSAS--YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG--N-AVNVHYVVPQYE 100 (290)
T ss_dssp HHHHHHHHTCSEEEECHH-HHHHH--TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS--S-HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEChH-HHHHh--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC--C-HHHHHHHHHHHH
Confidence 466777899999977410 01111 22222234467788888899999999999999999964 2 346788999999
Q ss_pred HcCCCEEEEccccc-ccccCCCCCCCCCCcCc--HHHHHHHHHhC--CCceEEEecCCC-C---HHHH----HHHhhh-c
Q psy2378 161 SAGCRTFIVHARNA-FLKKLNPKQNRKIPILK--YNFVYNLKKDF--PELEIIINGGIK-T---KKEI----DLHLNY-I 226 (956)
Q Consensus 161 ~~G~~~i~vh~r~~-~~~g~~~~~~~~~~~~~--~~~i~~v~~~~--~~ipVi~nGgI~-s---~~da----~~~l~~-a 226 (956)
++|+++|++-.... -..|+.+......-|.. .+.|+.+++.. ++.-|++=-+-. . .+++ ..+.+. |
T Consensus 101 ~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGA 180 (290)
T 2hjp_A 101 AAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGA 180 (290)
T ss_dssp HHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTC
T ss_pred HhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHHcCC
Confidence 99999999986542 01111110001111111 23344444442 233444444432 1 2333 333333 9
Q ss_pred CEEEEccccccCCcchHHHHHhhc
Q psy2378 227 DGVMLGREAYKNPFLMSNFDLNYY 250 (956)
Q Consensus 227 d~VmiGR~~l~~P~l~~~i~~~~~ 250 (956)
|+|++=-+ +.+|....++.+.+.
T Consensus 181 d~i~~e~~-~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 181 DAILIHSR-QKTPDEILAFVKSWP 203 (290)
T ss_dssp SEEEECCC-CSSSHHHHHHHHHCC
T ss_pred cEEEeCCC-CCCHHHHHHHHHHcC
Confidence 99988221 466777788877653
No 350
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=92.43 E-value=0.77 Score=49.32 Aligned_cols=127 Identities=9% Similarity=0.000 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 82 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGT----------TGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS--N---STA 82 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--c---cHH
Confidence 47788999999998999999988742 23333334555567777777665 4777765432 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE------ecCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII------NGGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~------nGgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.+.|.+.+ ++|||. +|--.+++...++.+
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 83 EAIAFVRHAQNAGADGVLIVSPYY--NK---P----TQEGIYQHFKAIDAAS-TIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 689999999999999998865321 00 0 0011235566888887 799876 454458888888765
No 351
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.31 E-value=0.24 Score=57.53 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
.+.++.+.++|+|.|.++.... . ...-++.++++++.+|++||++ |++.++++++++.+. ||+|.+
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g-------~-----~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG-------H-----SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT-------T-----SHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhccCceEEeccccc-------c-----chHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCCCEEEE
Confidence 5778899999999999986541 0 1134688999999988899987 889999999999988 999998
Q ss_pred ccc
Q psy2378 232 GRE 234 (956)
Q Consensus 232 GR~ 234 (956)
|-|
T Consensus 300 g~g 302 (496)
T 4fxs_A 300 GIG 302 (496)
T ss_dssp CSS
T ss_pred CCC
Confidence 644
No 352
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=92.30 E-value=0.31 Score=53.30 Aligned_cols=128 Identities=13% Similarity=0.113 Sum_probs=77.0
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEeccC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIG 142 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g 142 (956)
|+-..+...+|+++.+.++ ..||..+-+..|.| |..+ +.-.+.+++||++++ ..+.|-.-.+
T Consensus 71 ~~~~ti~~~~~e~~~~~~~---~~G~~~~KiKvg~~---------g~~~----~~d~~~v~avR~~~G~~~~L~vDaN~~ 134 (327)
T 2opj_A 71 PVNATVPAVGPEEAARIVA---SSGCTTAKVKVAER---------GQSE----ANDVARVEAVRDALGPRGRVRIDVNGA 134 (327)
T ss_dssp EBCEEECSCCHHHHHHHHH---HHCCSEEEEECCC-------------------CHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred EEeEEeCCCCHHHHHHHHH---HCCCCEEEEEeCCC---------CCCH----HHHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 3444556678888655544 46999999977643 2222 233567888888874 3444443445
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 222 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~ 222 (956)
|+ .++++++++.|++.++.+| ++.. .+++..+++++.. ++||.+-=.+.+..++.++
T Consensus 135 w~----~~~A~~~~~~L~~~~l~~i---------------EqP~---~~~~~~~~l~~~~-~iPIa~dEs~~~~~~~~~~ 191 (327)
T 2opj_A 135 WD----VDTAVRMIRLLDRFELEYV---------------EQPC---ATVDELAEVRRRV-SVPIAADESIRRAEDPLRV 191 (327)
T ss_dssp SC----HHHHHHHHHHHGGGCEEEE---------------ECCS---SSHHHHHHHHHHC-SSCEEC-----------CT
T ss_pred CC----HHHHHHHHHHHHhcCCcEE---------------eCCC---CCHHHHHHHHhhC-CCCEEcCCCCCCHHHHHHH
Confidence 54 3567899999999887766 1111 2577888999887 6999988889999999988
Q ss_pred hhh--cCEEEE
Q psy2378 223 LNY--IDGVML 231 (956)
Q Consensus 223 l~~--ad~Vmi 231 (956)
++. +|.|.+
T Consensus 192 i~~~a~d~i~i 202 (327)
T 2opj_A 192 RDAEAADVVVL 202 (327)
T ss_dssp TTTTCCSBEEE
T ss_pred HHhCCCCEEEe
Confidence 776 888876
No 353
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=92.15 E-value=1.4 Score=47.72 Aligned_cols=179 Identities=10% Similarity=0.051 Sum_probs=100.6
Q ss_pred cccCCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccE
Q psy2378 57 LDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDI 135 (956)
Q Consensus 57 ~~~~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv 135 (956)
...+..+.|++ =+..-|+- .|++++++|||+|=+--++ ..+. .-|+-....-..+.+...++.|.+.+ +.||
T Consensus 32 r~l~~~~~~i~-~~~ayD~~----sA~i~e~aGfdai~vs~~~-~a~~-~lG~pD~~~vt~~em~~~~~~I~r~~~~~Pv 104 (318)
T 1zlp_A 32 HRLIEEHGSVL-MPGVQDAL----SAAVVEKTGFHAAFVSGYS-VSAA-MLGLPDFGLLTTTEVVEATRRITAAAPNLCV 104 (318)
T ss_dssp HHHHHHSSSEE-EEEECSHH----HHHHHHHTTCSEEEECHHH-HHHH-HHCCCSSSCSCHHHHHHHHHHHHHHSSSSEE
T ss_pred HHHHhCCCcEE-EecCCCHH----HHHHHHHcCCCEEEECcHH-HhhH-hcCCCCCCCCCHHHHHHHHHHHHhhccCCCE
Confidence 33343444433 24444543 4567788999999773210 0000 01121222345677788888898888 9999
Q ss_pred EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccc-cccCCCCCCCCCCcC--cHHHHHHHHHhCCCceEEEecC
Q psy2378 136 TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPIL--KYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 136 ~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~~--~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.+-+..|+. + .++..+.++.++++|+++|++-..... ..|+.+. ...-|. ..+.|+.+++...+-+...+|+
T Consensus 105 iaD~d~Gyg--~-~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~g--k~L~p~~e~~~rI~Aa~~A~~~~~~~I~AR 179 (318)
T 1zlp_A 105 VVDGDTGGG--G-PLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRG--KAVVPAEEHALKIAAAREAIGDSDFFLVAR 179 (318)
T ss_dssp EEECTTCSS--S-HHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSC--CCBCCHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred EEeCCCCCC--C-HHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCC--CccCCHHHHHHHHHHHHHhcccCCcEEEEe
Confidence 999999975 2 346788999999999999999765420 1111110 001111 1233444444321234555555
Q ss_pred CCCHH---------HHHHHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 213 IKTKK---------EIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 213 I~s~~---------da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
..... +++.+.+. ||+|++= .+.++...+++.+.+
T Consensus 180 tda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e--~~~~~e~~~~i~~~l 224 (318)
T 1zlp_A 180 TDARAPHGLEEGIRRANLYKEAGADATFVE--APANVDELKEVSAKT 224 (318)
T ss_dssp ECTHHHHHHHHHHHHHHHHHHTTCSEEEEC--CCCSHHHHHHHHHHS
T ss_pred eHHhhhcCHHHHHHHHHHHHHcCCCEEEEc--CCCCHHHHHHHHHhc
Confidence 44321 22233333 9999883 245667777777655
No 354
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=92.14 E-value=0.36 Score=51.35 Aligned_cols=94 Identities=14% Similarity=0.288 Sum_probs=61.9
Q ss_pred HHHHHHHhhccCc--cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHH-HHH
Q psy2378 121 SDCIKAMRDSVEI--DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF-VYN 197 (956)
Q Consensus 121 ~eiv~~v~~~~~~--pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~-i~~ 197 (956)
.+-++++++..+. ++.+-+. +++ + ++...++|+|+|-++... +..+.. ++.
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~-------tle---e-~~~A~~aGaD~I~ld~~~---------------~~~l~~~v~~ 222 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE-------SFE---E-AKNAMNAGADIVMCDNLS---------------VLETKEIAAY 222 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES-------SHH---H-HHHHHHHTCSEEEEETCC---------------HHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEcC-------CHH---H-HHHHHHcCCCEEEECCCC---------------HHHHHHHHHH
Confidence 5667777777652 4444221 122 2 334456899999887521 123322 233
Q ss_pred HHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcc
Q psy2378 198 LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 198 v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l 241 (956)
++...|++||.++||| +++.+.++.+. +|++.+|......|++
T Consensus 223 l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 223 RDAHYPFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQATFI 266 (273)
T ss_dssp HHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCCCC
T ss_pred hhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCCCC
Confidence 4444567999999999 89999999988 9999999987665653
No 355
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=92.10 E-value=0.33 Score=52.54 Aligned_cols=80 Identities=14% Similarity=0.170 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccc---cccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGA---ILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~---~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~ 150 (956)
+++...+.|+...+.|+|.||||+-+--+ |+ +.....+.+..+|+++++..++|++|-..-
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~--------- 94 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRP-------GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWK--------- 94 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSC---------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCC---------
Confidence 56777777888888999999999744211 22 123457788889999998889999886432
Q ss_pred HHHHHHHHHHHcCCCEEE-Ecc
Q psy2378 151 FVRDFVGTVSSAGCRTFI-VHA 171 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~-vh~ 171 (956)
.+++++..++|++.|. |++
T Consensus 95 --~~Va~aAl~aGa~iINDVsg 114 (314)
T 2vef_A 95 --SQVAEAALAAGADLVNDITG 114 (314)
T ss_dssp --HHHHHHHHHTTCCEEEETTT
T ss_pred --HHHHHHHHHcCCCEEEECCC
Confidence 3678888889999996 554
No 356
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.03 E-value=0.22 Score=57.65 Aligned_cols=70 Identities=21% Similarity=0.274 Sum_probs=56.8
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..+.++.+.++|+|.|.++.... . .+..++.++++++.+|++||++ |++.++++++++.+. ||+|.
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g----~--------~~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~ 296 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHG----H--------SKGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGADAVK 296 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCC----S--------BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEE
T ss_pred hHHHHHHHhhcccceEEecccCC----c--------chhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCCCEEE
Confidence 45778899999999999986541 1 1235688999999988889987 889999999999988 99999
Q ss_pred Eccc
Q psy2378 231 LGRE 234 (956)
Q Consensus 231 iGR~ 234 (956)
+|-+
T Consensus 297 vg~g 300 (490)
T 4avf_A 297 VGIG 300 (490)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 8643
No 357
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=91.92 E-value=0.99 Score=49.26 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=70.1
Q ss_pred CChHHHHHHHHHHhhccCccEEEEeccCCC-CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHH
Q psy2378 115 TKPLLVSDCIKAMRDSVEIDITVKHRIGID-DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN 193 (956)
Q Consensus 115 ~~~~~~~eiv~~v~~~~~~pv~vKir~g~~-~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~ 193 (956)
..++.+.+.++.+++.++.|+.|-+-.... .... ..+.++.+.+.|++.|++|... .++
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~---~~~~~~~~~~~g~d~V~~~~g~-----------------p~~ 109 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVP---YAEYRAAIIEAGIRVVETAGND-----------------PGE 109 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCC---HHHHHHHHHHTTCCEEEEEESC-----------------CHH
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCcc---HHHHHHHHHhcCCCEEEEcCCC-----------------cHH
Confidence 358888899999998887888776654310 0111 3467888899999999998642 156
Q ss_pred HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE-cc
Q psy2378 194 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 233 (956)
Q Consensus 194 ~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi-GR 233 (956)
.++.+++. ++||+. .+.+++++..+.+. +|+|.+ |+
T Consensus 110 ~~~~l~~~--gi~vi~--~v~t~~~a~~~~~~GaD~i~v~g~ 147 (328)
T 2gjl_A 110 HIAEFRRH--GVKVIH--KCTAVRHALKAERLGVDAVSIDGF 147 (328)
T ss_dssp HHHHHHHT--TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred HHHHHHHc--CCCEEe--eCCCHHHHHHHHHcCCCEEEEECC
Confidence 77888774 689985 48899999988877 999988 54
No 358
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=91.89 E-value=1.2 Score=48.59 Aligned_cols=127 Identities=9% Similarity=-0.006 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~--~---st~ 116 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGS----------TGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA--L---RTD 116 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 47888999999998999999998753 23333334555567777777766 3677775443 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. .....-+++.+.|.+.+ ++|||. | |--.+++.+.++.+
T Consensus 117 eai~la~~A~~~Gadavlv~~P~Y--~~-------~s~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 117 EAVALAKDAEAAGADALLLAPVSY--TP-------LTQEEAYHHFAAVAGAT-ALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCS--SC-------CCHHHHHHHHHHHHHHC-SSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC-------CCHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 689999999999999998864321 00 00011245667888887 699864 4 43457888887754
No 359
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=91.77 E-value=0.94 Score=49.16 Aligned_cols=125 Identities=12% Similarity=0.067 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+.. +..
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~------st~ 93 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGN----------TGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY------SVD 93 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS------SHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcc----------cCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc------CHH
Confidence 48889999999999999999988642 23333334555567777777666 4677765432 234
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e--cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N--GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n--GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..... .. . ....-.++.+.|.+++ ++|||. | |- .+++.+.++.+
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~tg~-l~~~~~~~La~ 159 (314)
T 3d0c_A 94 TAIELGKSAIDSGADCVMIHQPVH--PY---I----TDAGAVEYYRNIIEAL-DAPSIIYFKDAH-LSDDVIKELAP 159 (314)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCC--SC---C----CHHHHHHHHHHHHHHS-SSCEEEEECCTT-SCTHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEeCCCC-cCHHHHHHHHc
Confidence 689999999999999998865321 10 0 0011245667888887 699864 4 44 67888777753
No 360
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=91.76 E-value=0.64 Score=49.91 Aligned_cols=91 Identities=11% Similarity=0.121 Sum_probs=61.7
Q ss_pred HHHHHHHHhhccCc-cEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHH
Q psy2378 120 VSDCIKAMRDSVEI-DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNL 198 (956)
Q Consensus 120 ~~eiv~~v~~~~~~-pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v 198 (956)
+.+-++++++..+. ++.|-+. +++ + ++.+.++|+|.|-++.. +.+.++++
T Consensus 195 i~~ai~~~r~~~~~~kI~vev~-------tle---e-~~eA~~aGaD~I~ld~~------------------~~e~l~~~ 245 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVE-------NLD---E-LDDALKAGADIIMLDNF------------------NTDQMREA 245 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES-------SHH---H-HHHHHHTTCSEEEESSC------------------CHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEeC-------CHH---H-HHHHHHcCCCEEEECCC------------------CHHHHHHH
Confidence 35666777776643 3443221 222 2 34446789999988752 34556666
Q ss_pred HHhCC-CceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 199 KKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 199 ~~~~~-~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
++.+. ++||.++||| +++.+.++.+. +|++.+|.....-|+
T Consensus 246 v~~~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a~~ 288 (296)
T 1qap_A 246 VKRVNGQARLEVSGNV-TAETLREFAETGVDFISVGALTKHVRA 288 (296)
T ss_dssp HHTTCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHHHEEEC
T ss_pred HHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCC
Confidence 66552 5899999999 89999999988 999999985544443
No 361
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.69 E-value=1.6 Score=44.99 Aligned_cols=107 Identities=11% Similarity=0.132 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHH
Q psy2378 118 LLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYN 197 (956)
Q Consensus 118 ~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~ 197 (956)
..+.++++.+...-++=|++---.+..- .......++|+..+++|+.+|.+. ..+.+++
T Consensus 5 ~~~~~~~~~~~~~~~livscq~~~~~pl-~~~~~~~~~A~a~~~~Ga~~i~~~--------------------~~~~i~~ 63 (229)
T 3q58_A 5 SLLARLEQSVHENGGLIVSCQPVPGSPM-DKPEIVAAMAQAAASAGAVAVRIE--------------------GIENLRT 63 (229)
T ss_dssp HHHHHHHHHHHHHCCEEEECCCCTTSTT-CSHHHHHHHHHHHHHTTCSEEEEE--------------------SHHHHHH
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCCCCCC-CCcchHHHHHHHHHHCCCcEEEEC--------------------CHHHHHH
Confidence 4556666666333344444422222211 223568899999999999999762 3467899
Q ss_pred HHHhCCCceEEEec-----C--C---CCHHHHHHHhhh-cCEEEEccccccCCcchHHHH
Q psy2378 198 LKKDFPELEIIING-----G--I---KTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 198 v~~~~~~ipVi~nG-----g--I---~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~ 246 (956)
+++.+ ++||++.- | + .+.+++.++++. ||.|.+.-++..+|....++.
T Consensus 64 ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i 122 (229)
T 3q58_A 64 VRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLL 122 (229)
T ss_dssp HGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHH
T ss_pred HHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHH
Confidence 99998 89998632 1 2 245688888877 999999888877886554443
No 362
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=91.67 E-value=2.1 Score=45.89 Aligned_cols=109 Identities=7% Similarity=0.036 Sum_probs=70.6
Q ss_pred ccccCChHHHHHHHHHHhhccCccEEEEecc-CC-CCC------C-cHHHHHHHHHHHHHcCCCEEEEcccccccccCCC
Q psy2378 111 AILMTKPLLVSDCIKAMRDSVEIDITVKHRI-GI-DDI------N-SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNP 181 (956)
Q Consensus 111 ~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-g~-~~~------~-~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~ 181 (956)
-.+..|-+...++++...+. ++.|-.-+.. |. +++ + .+-+..+..+-+++.|+|+|.+.-+|. ...|.+
T Consensus 106 ~p~eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~-HG~Yk~ 183 (305)
T 1rvg_A 106 EDFETNVRETRRVVEAAHAV-GVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTS-HGAYKG 183 (305)
T ss_dssp SCHHHHHHHHHHHHHHHHHT-TCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCC-SSSBCS
T ss_pred CCHHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCcc-ccccCC
Confidence 34566778888888877753 6666555532 22 211 0 011234445556778999999987773 111221
Q ss_pred CCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh
Q psy2378 182 KQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 182 ~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ 225 (956)
. ..+..+++.++++++.+ ++|++.-|+-.-|++..+++..
T Consensus 184 ~---g~p~L~~~~L~~I~~~~-~vpLVlHGgSsv~~~~~~~~~~ 223 (305)
T 1rvg_A 184 K---GRPFIDHARLERIARLV-PAPLVLHGASAVPPELVERFRA 223 (305)
T ss_dssp S---SSCCCCHHHHHHHHHHC-CSCEEECSCCCCCHHHHHHHHH
T ss_pred C---CCCccCHHHHHHHHHhc-CCCEEEeCCCCCcHHHHHHHHh
Confidence 1 13458999999999999 5999999998778887777765
No 363
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.67 E-value=0.87 Score=49.18 Aligned_cols=127 Identities=12% Similarity=0.058 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+ |.. +..
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gt----------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~ 97 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGT----------TGESPTTTDGEKIELLRAVLEAVGDRARVIAGA--GTY---DTA 97 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--CCS---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC--CCC---CHH
Confidence 47889999999999999999988753 22223334555567777777766 46777654 322 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. .....-.++.++|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 98 ~ai~la~~a~~~Gadavlv~~P~y--~~-------~s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 167 (304)
T 3l21_A 98 HSIRLAKACAAEGAHGLLVVTPYY--SK-------PPQRGLQAHFTAVADAT-ELPMLLYDIPGRSAVPIEPDTIRALAS 167 (304)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCS--SC-------CCHHHHHHHHHHHHTSC-SSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC--CC-------CCHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 789999999999999998865321 00 00111245667788877 79986 44 55567888777753
No 364
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=91.60 E-value=0.057 Score=60.55 Aligned_cols=44 Identities=16% Similarity=0.342 Sum_probs=38.0
Q ss_pred CCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEc
Q psy2378 187 IPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 187 ~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiG 232 (956)
.+..+|+.++++++.+ ++||+.-| +.++++++.+.+. +|+|.++
T Consensus 209 ~p~~~~~~i~~i~~~~-~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 209 DASFNWEALRWLRDLW-PHKLLVKG-LLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CTTCCHHHHHHHHHHC-CSEEEEEE-ECCHHHHHHHHHTTCSEEEEC
T ss_pred CccccHHHHHHHHHhc-CCCEEEEe-cCcHHHHHHHHHcCCCEEEEc
Confidence 4556899999999998 79998654 8999999999988 9999993
No 365
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=91.53 E-value=1.5 Score=46.77 Aligned_cols=120 Identities=9% Similarity=0.109 Sum_probs=74.2
Q ss_pred CcccccccCChHHHHHHHHHHhhccCccEEEEec-cC-CCCCC-----cHHHHHHHHHHHHHcCCCEEEEcccccccccC
Q psy2378 107 GFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR-IG-IDDIN-----SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKL 179 (956)
Q Consensus 107 ~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir-~g-~~~~~-----~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~ 179 (956)
|+.--.+..|-+...++++...+ .++.|-.-+. +| .+++. .+-+..+..+-+++.|+|+|.+.-++. .|.
T Consensus 110 DgS~~p~eeNi~~Tk~vv~~ah~-~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~--HG~ 186 (288)
T 3q94_A 110 DASHHPFEENVETTKKVVEYAHA-RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSV--HGP 186 (288)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHT-TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCB--SSC
T ss_pred eCCCCCHHHHHHHHHHHHHHHHH-cCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcc--cCC
Confidence 43333456677888888887775 3666655553 22 22210 011234555557789999999987773 231
Q ss_pred CCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH-HHHHHhhh-cCEEEEccc
Q psy2378 180 NPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK-EIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 180 ~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~-da~~~l~~-ad~VmiGR~ 234 (956)
.+. .+..+++.+++|++.+ ++|++.-|+-..++ ++.+++.. +-=|=|++-
T Consensus 187 Y~~----~p~Ld~~~L~~I~~~v-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Td 238 (288)
T 3q94_A 187 YKG----EPNLGFAEMEQVRDFT-GVPLVLHGGTGIPTADIEKAISLGTSKINVNTE 238 (288)
T ss_dssp CSS----SCCCCHHHHHHHHHHH-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHH
T ss_pred cCC----CCccCHHHHHHHHHhc-CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChH
Confidence 111 2458999999999998 69999888766654 46677765 444444443
No 366
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=91.49 E-value=0.74 Score=43.12 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=52.2
Q ss_pred HHHHHHhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCCEEeeCchhhchHHHHHH
Q psy2378 887 FEFMLNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDLQQ 951 (956)
Q Consensus 887 ~e~~~~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~~~~lT~~G~~~~~~i~~ 951 (956)
...++.-.....+++..++.+.+|.+...+...++.|++.||+..+...+.||++|+.+...+..
T Consensus 19 L~~l~~l~~~~~~~s~~ela~~l~is~~tv~~~l~~Le~~Gli~r~~~~~~Lt~~g~~~~~~~~~ 83 (139)
T 2x4h_A 19 LLTIKRYNDSGEGAKINRIAKDLKIAPSSVFEEVSHLEEKGLVKKKEDGVWITNNGTRSINYLIK 83 (139)
T ss_dssp HHHHHHHHTTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCHHHHHHHhCCChHHHHHHHHHHHHCCCEEecCCeEEEChhHHHHHHHHHH
Confidence 33333323335678999999999998888888999999999999887889999999998876654
No 367
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=91.49 E-value=1 Score=48.21 Aligned_cols=126 Identities=11% Similarity=0.036 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 82 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGT----------TGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS--N---CTE 82 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--C---CHH
Confidence 47888999999998999999998753 23333334555567777777666 3677655432 2 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++||| .| |--.+++.+.++.
T Consensus 83 ~ai~la~~a~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 83 EAIELSVFAEDVGADAVLSITPYY--NK---P----TQEGLRKHFGKVAESI-NLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 789999999999999998864321 00 0 0011245667788887 69976 34 5445788888776
No 368
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=91.47 E-value=0.37 Score=51.89 Aligned_cols=85 Identities=11% Similarity=0.028 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
.+++...+.|+...+.|+|.||||+-+-.|....++-.-+.....+++..+|+++++.+++|++|-..-
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~----------- 114 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR----------- 114 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC-----------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC-----------
Confidence 478888888888889999999999743222110000001112345668888999988889999986432
Q ss_pred HHHHHHHHHcCCCEEE
Q psy2378 153 RDFVGTVSSAGCRTFI 168 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~ 168 (956)
.+++++..++|++.|.
T Consensus 115 ~~Va~aAl~aGa~iIN 130 (314)
T 3tr9_A 115 PRVMREAVNTGADMIN 130 (314)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 2567777778999885
No 369
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.46 E-value=0.96 Score=48.79 Aligned_cols=127 Identities=10% Similarity=0.011 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~--~---~t~ 94 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGT----------TGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS--N---NTH 94 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC--C---CHH
Confidence 47888999999999999999998753 23333334555567777777666 4677765432 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-+++.++|.+.+ ++||| .| |--.+++.+.++.+
T Consensus 95 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 95 ASIDLTKKATEVGVDAVMLVAPYY--NK---P----SQEGMYQHFKAIAEST-PLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 689999999999999998864321 00 0 0011245667888877 79976 44 44457888877753
No 370
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=91.36 E-value=0.51 Score=52.98 Aligned_cols=127 Identities=9% Similarity=0.026 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEeccCCCCCCcHHHH
Q psy2378 75 PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 75 ~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~~ 152 (956)
++++++.|+.+.+.||..+-+..|.+.. +-. -..+++.-.+.+++||++++ .++.+-.-.+|+. +++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~------~~~-~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~----~~A 217 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGR------HMP-LWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNL----NLT 217 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTT------TSC-HHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCH----HHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCc------ccc-ccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCH----HHH
Confidence 5778888887788999999998775310 000 00125666788999999864 5555555555653 568
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHh-----CCCceEEEecCCCCHHHHHHHhhh--
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-----FPELEIIINGGIKTKKEIDLHLNY-- 225 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~-----~~~ipVi~nGgI~s~~da~~~l~~-- 225 (956)
+++++.|++.++.+| ++.. + .+++..+++++. . .+||.+.=.+. ..++.++++.
T Consensus 218 ~~~~~~L~~~~l~~i---------------EeP~-~-~d~~~~~~l~~~~~~~~~-~ipIa~gE~~~-~~~~~~li~~~a 278 (392)
T 3v5c_A 218 KEVLAALSDVNLYWL---------------EAAF-H-EDEALYEDLKEWLGQRGQ-NVLIADGEGLA-SPHLIEWATRGR 278 (392)
T ss_dssp HHHHHHTTTSCCCEE---------------ECSS-S-CCHHHHHHHHHHHHHHTC-CCEEEECCSSC-CTTHHHHHHTTS
T ss_pred HHHHHhcccCCCeEE---------------eCCC-C-cCHHHHHHHHHhhccCCC-CCcEECCCccc-HHHHHHHHHcCC
Confidence 899999999988877 2221 2 367777888764 4 57876655666 7788888876
Q ss_pred cCEEEE
Q psy2378 226 IDGVML 231 (956)
Q Consensus 226 ad~Vmi 231 (956)
+|.|.+
T Consensus 279 ~dii~~ 284 (392)
T 3v5c_A 279 VDVLQY 284 (392)
T ss_dssp CCEECC
T ss_pred CcEEEe
Confidence 888765
No 371
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=91.27 E-value=0.8 Score=52.40 Aligned_cols=120 Identities=9% Similarity=0.061 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~ 150 (956)
.+|+++++.|+.+.+ .||..|-+..|.+ +++.-.+.+++||++. +.++.|-.-.+|+ .+
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~----~~ 244 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCWS----LD 244 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBSC----HH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCCC----HH
Confidence 579999999987765 6999999876532 2334456788888876 3344444444554 35
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCc----HHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK----YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 225 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~----~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~- 225 (956)
+++++++.|++. +.+|. +. .++.+ ++..+++++.. ++||.+.=.+.++.++.++++.
T Consensus 245 ~A~~~~~~L~~~-l~~iE---------------eP-~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 306 (455)
T 3pfr_A 245 EAIQLCKGLNDV-LTYAE---------------DP-CIGENGYSGREIMAEFRRRT-GIPTATNMIATNWREMCHAIMLQ 306 (455)
T ss_dssp HHHHHHTTCTTT-CSEEE---------------SC-BCCBTTBCHHHHHHHHHHHH-CCCEEESSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHhhccc-ceeee---------------cC-CChhhccchHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHHcC
Confidence 678888888876 66652 11 12234 68889999887 6998886567789999999876
Q ss_pred -cCEE
Q psy2378 226 -IDGV 229 (956)
Q Consensus 226 -ad~V 229 (956)
+|.+
T Consensus 307 a~di~ 311 (455)
T 3pfr_A 307 SVDIP 311 (455)
T ss_dssp CCSEE
T ss_pred CCCEE
Confidence 8865
No 372
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=91.23 E-value=1.2 Score=48.06 Aligned_cols=128 Identities=12% Similarity=0.091 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC---ccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE---IDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~---~pv~vKir~g~~~~~~~ 149 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.++ +||.+-+ |.. +.
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv--g~~---~t 89 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGT----------TGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA--GSN---AT 89 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC--CCS---SH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC--CCC---CH
Confidence 47888999999999999999988753 222233345555677777777663 5776643 322 24
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
.+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++||+ .| |--.+++.+.++.
T Consensus 90 ~~ai~la~~a~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 90 HEAVGLAKFAKEHGADGILSVAPYY--NK---P----TQQGLYEHYKAIAQSV-DIPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEeCchhhCcCCCHHHHHHHH
Confidence 5789999999999999998865321 00 0 0111246677888887 79986 43 5556788887775
Q ss_pred hh
Q psy2378 224 NY 225 (956)
Q Consensus 224 ~~ 225 (956)
+.
T Consensus 160 ~~ 161 (301)
T 3m5v_A 160 RD 161 (301)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 373
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=91.22 E-value=1.3 Score=48.07 Aligned_cols=126 Identities=8% Similarity=0.013 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+ |. +..
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g~----~t~ 93 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGN----------TSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--GY----ATS 93 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CS----SHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcc----------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--Cc----CHH
Confidence 47889999999999999999988752 23333334555567777777666 46887766 31 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-. +. ......-.++.++|.+.+ ++||| .| |--.+++.+.++.+
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~--y~-------~~s~~~l~~~f~~va~a~-~lPiilYn~g~~l~~~~~~~La~ 159 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIHMPI--HP-------YVTAGGVYAYFRDIIEAL-DFPSLVYFKDPEISDRVLVDLAP 159 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCC--CS-------CCCHHHHHHHHHHHHHHH-TSCEEEEECCTTSCTHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCC--CC-------CCCHHHHHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHc
Confidence 78999999999999999886432 10 001112246677888877 69975 56 65567887777753
No 374
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=91.15 E-value=1.8 Score=46.37 Aligned_cols=126 Identities=11% Similarity=0.003 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t~ 82 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGT----------TGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGG--N---ATH 82 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC--S---CHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 37788999999888999999988753 23333334445567777777665 3677655432 2 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
+++++++.++++|+|++-+..-.. .. .....-.++.++|.+++ ++||| .| |--.+++.+.++.
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~y--~~-------~s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 83 EAVHLTAHAKEVGADGALVVVPYY--NK-------PTQRGLYEHFKTVAQEV-DIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS--SC-------CCHHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC-------CCHHHHHHHHHHHHHhc-CCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 789999999999999998864321 00 00111245667788887 79976 44 4445888888776
No 375
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=91.14 E-value=0.69 Score=53.56 Aligned_cols=70 Identities=16% Similarity=0.236 Sum_probs=56.9
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..+.++++.++|+|.|.+++-. |. ....|+.+.++++.+|++||+ .|+|.+.+++.++++. +|+|.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~----g~--------~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAH----GH--------SAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVK 300 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSC----TT--------CHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCeEEEeeec----Cc--------chhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEE
Confidence 3567889999999999998621 11 113578899999988789999 8999999999999988 99999
Q ss_pred Eccc
Q psy2378 231 LGRE 234 (956)
Q Consensus 231 iGR~ 234 (956)
+|.|
T Consensus 301 vg~g 304 (491)
T 1zfj_A 301 VGIG 304 (491)
T ss_dssp ECSS
T ss_pred ECcc
Confidence 9864
No 376
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=91.00 E-value=8.1 Score=42.31 Aligned_cols=143 Identities=12% Similarity=0.092 Sum_probs=83.5
Q ss_pred CCCEEEEe-cCCC-HHH---HHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChH--HHHHHHHHHhhccCccE
Q psy2378 63 EHPIAFQV-GDNE-PKK---LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPL--LVSDCIKAMRDSVEIDI 135 (956)
Q Consensus 63 ~~p~~vQl-~g~~-~~~---~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~--~~~eiv~~v~~~~~~pv 135 (956)
..|+++-= .|.+ +.. -...|+.+.++|+.. ..|. ..+. +.++. ...++++. ...+.|+
T Consensus 55 ~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~---~~~~---------~~~~-l~~~~~~~~~~~~~~--~~~~~pv 119 (349)
T 1p0k_A 55 SSPIFINAMTGGGGKLTYEINKSLARAASQAGIPL---AVGS---------QMSA-LKDPSERLSYEIVRK--ENPNGLI 119 (349)
T ss_dssp SCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCE---ECCC---------CTTT-TTCHHHHHHHHHHHH--HCSSSCE
T ss_pred CCceEEcCccccchhhhhHHHHHHHHHHHHcCCcE---Eecc---------chhc-ccCcccccceehhhh--hCCCcee
Confidence 45777664 3555 332 334555667777542 1111 1112 33442 22233332 2357899
Q ss_pred EEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcC--cHHHHHHHHHhCCCceEEEe--c
Q psy2378 136 TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL--KYNFVYNLKKDFPELEIIIN--G 211 (956)
Q Consensus 136 ~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~--~~~~i~~v~~~~~~ipVi~n--G 211 (956)
.+.+..+++. ..+.+.++.+|+|+|.+|.... .+..++.. .+.. -++.++++++.+ ++||+.- |
T Consensus 120 ~~~i~~~~~~-------~~~~~~~~~~gad~i~i~~~~~-~~~~~~~~---~~~~~~~~~~i~~vr~~~-~~Pv~vK~~~ 187 (349)
T 1p0k_A 120 FANLGSEATA-------AQAKEAVEMIGANALQIHLNVI-QEIVMPEG---DRSFSGALKRIEQICSRV-SVPVIVKEVG 187 (349)
T ss_dssp EEEEETTCCH-------HHHHHHHHHTTCSEEEEEECTT-TTC-----------CTTHHHHHHHHHHHC-SSCEEEEEES
T ss_pred EEeecCCCCH-------HHHHHHHHhcCCCeEEecccch-hhhcCCCC---CcchHHHHHHHHHHHHHc-CCCEEEEecC
Confidence 8888765442 2455678889999999986642 11111100 1111 357899999887 7999875 5
Q ss_pred CCCCHHHHHHHhhh-cCEEEEc
Q psy2378 212 GIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 212 gI~s~~da~~~l~~-ad~VmiG 232 (956)
...+++++..+.+. +|+|.+.
T Consensus 188 ~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 188 FGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp SCCCHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEEc
Confidence 55789999988887 9999874
No 377
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.99 E-value=1.1 Score=48.10 Aligned_cols=127 Identities=13% Similarity=-0.013 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t~ 89 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGT----------TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGA--N---NTV 89 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--c---CHH
Confidence 47888999999999999999998753 12223334555567777777666 4677774332 1 245
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 90 ~ai~la~~a~~~Gadavlv~~P~y--~~---~----~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 90 EAIALSQAAEKAGADYTLSVVPYY--NK---P----SQEGIYQHFKTIAEAT-SIPMIIYNVPGRTVVSMTNDTILRLAE 159 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEECCchhccCCCHHHHHHHHc
Confidence 789999999999999998864321 10 0 0011246677888887 79986 44 55557888877753
No 378
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.99 E-value=1 Score=48.86 Aligned_cols=127 Identities=13% Similarity=0.051 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~--~---st~ 105 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGT----------TGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA--N---STR 105 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSG----------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--c---CHH
Confidence 48899999999999999999988742 23323334555566777776665 3677764332 2 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 106 eai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 106 EAVALTEAAKSGGADACLLVTPYY--NK---P----TQEGMYQHFRHIAEAV-AIPQILYNVPGRTSCDMLPETVERLSK 175 (314)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHS-CSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 789999999999999998865321 00 0 0111246677888887 79986 33 55567888877764
No 379
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=90.98 E-value=1.5 Score=47.38 Aligned_cols=126 Identities=12% Similarity=0.057 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--~---st~ 94 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGT----------TGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT--N---STE 94 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSG----------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC--c---cHH
Confidence 47888999999999999999988752 23333334555567777777665 4677765432 2 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e-----cCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n-----GgI~s~~da~~~l 223 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+++ ++|||. | |--.+++.+.++.
T Consensus 95 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 95 KTLKLVKQAEKLGANGVLVVTPYY--NK---P----TQEGLYQHYKYISERT-DLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHTTC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 789999999999999998864321 00 0 0011245667787777 699763 4 4335788887775
No 380
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.97 E-value=1.6 Score=46.97 Aligned_cols=128 Identities=9% Similarity=0.040 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~--~---~t~ 93 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGS----------TGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC--V---STA 93 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECee----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 47888999999999999999999743 23333334555567777777666 3677764432 2 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.++++||| .| |--.+++.+.++.+
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 94 ESQQLAASAKRYGFDAVSAVTPFY--YP---F----SFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCEEEecCCCC--CC---C----CHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 689999999999999998864321 00 0 0011235667777777338976 45 43357888877753
No 381
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=90.87 E-value=1.5 Score=47.27 Aligned_cols=141 Identities=10% Similarity=0.146 Sum_probs=81.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 141 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 141 (956)
.-|+++++= |.+.+... .+.++||.-|.+ |+.--.+..|-+...++++...+. ++.|-.-+..
T Consensus 75 ~VPValHlDHg~~~e~i~----~ai~~GFtSVMi-----------DgS~~p~eENi~~Tk~vv~~ah~~-gvsVEaELG~ 138 (323)
T 2isw_A 75 DIPICIHLDHGDTLESVK----MAIDLGFSSVMI-----------DASHHPFDENVRITKEVVAYAHAR-SVSVEAELGT 138 (323)
T ss_dssp TSCEEEEEEEECSHHHHH----HHHHTTCSEEEE-----------CCTTSCHHHHHHHHHHHHHHHHTT-TCEEEEEESC
T ss_pred CCcEEEECCCCCCHHHHH----HHHHcCCCeEEe-----------cCCCCCHHHHHHHHHHHHHHHHHc-CCeEEEEeCC
Confidence 345555552 33433322 233456665555 333334566777888888877643 5555544432
Q ss_pred -CC-CC----CCcHHHHHHHHHHHHHcCCCEEEEccccccccc-CCCCCCCCCCc--CcHHHHHHHHHhCCCceEEEecC
Q psy2378 142 -GI-DD----INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPI--LKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 142 -g~-~~----~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g-~~~~~~~~~~~--~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
|. ++ ...+-+..+..+-+++.|+|+|.+.-+|. .| |..+ ..+. .+++.+++|++.+ ++|++.-|+
T Consensus 139 vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~--HG~Yk~~---~~p~~~L~~~~L~~I~~~~-~vpLVlHGg 212 (323)
T 2isw_A 139 LGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTS--HGAYKFK---SESDIRLAIDRVKTISDLT-GIPLVMHGS 212 (323)
T ss_dssp C----------CCCCCHHHHHHHHHHHCCSEEEECSSCC--SSSBCCC---C----CCCCHHHHHHHHHH-CSCEEECSC
T ss_pred ccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCcc--ccccCCC---CCcccccCHHHHHHHHHHh-CCCeEEECC
Confidence 21 21 10011234455556789999999987773 22 2101 1234 7899999999998 799999998
Q ss_pred CCCHHHHHHHhhh
Q psy2378 213 IKTKKEIDLHLNY 225 (956)
Q Consensus 213 I~s~~da~~~l~~ 225 (956)
-.-|++..+.+..
T Consensus 213 Ssvp~~~~~~~~~ 225 (323)
T 2isw_A 213 SSVPKDVKDMINK 225 (323)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 8777777777764
No 382
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.87 E-value=0.93 Score=49.22 Aligned_cols=128 Identities=11% Similarity=-0.034 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~--~---~t~ 106 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGS----------TGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSD--L---TTA 106 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 47889999999999999999988752 23333334555567777777665 4778775432 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. .....-+++.++|.+++ ++||+ .| |--.+++.+.++..
T Consensus 107 ~ai~la~~A~~~Gadavlv~~P~y--~~-------~s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L~a 176 (315)
T 3na8_A 107 KTVRRAQFAESLGAEAVMVLPISY--WK-------LNEAEVFQHYRAVGEAI-GVPVMLYNNPGTSGIDMSVELILRIVR 176 (315)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCS--SC-------CCHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC-------CCHHHHHHHHHHHHHhC-CCcEEEEeCcchhCcCCCHHHHHHHHh
Confidence 789999999999999998865321 00 00112246677888887 68975 44 44456777777733
Q ss_pred h
Q psy2378 225 Y 225 (956)
Q Consensus 225 ~ 225 (956)
.
T Consensus 177 ~ 177 (315)
T 3na8_A 177 E 177 (315)
T ss_dssp H
T ss_pred c
Confidence 3
No 383
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=90.83 E-value=5.7 Score=41.99 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=90.9
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 144 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 144 (956)
.+.+-++..+.++... |.+.|+|-|||+.+=. -| .+- |. ..+++.+++.+++||-+=||+-..
T Consensus 39 ~~~lEvc~~s~~~a~~----A~~gGAdRIELc~~l~--------~G-GlT--PS--~g~i~~a~~~~~ipV~vMIRPRgG 101 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVN----AERGGADRIELCSGLS--------EG-GTT--PS--MGVLQVVKQSVQIPVFVMIRPRGG 101 (287)
T ss_dssp CSEEEEEESSHHHHHH----HHHHTCSEEEECBCGG--------GT-CBC--CC--HHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CceEEEEeCCHHHHHH----HHHhCCCEEEECCCCC--------CC-CCC--CC--HHHHHHHHHhcCCCeEEEEecCCC
Confidence 3678888888876554 4567999999963211 11 111 21 245677777788999988887321
Q ss_pred ----CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCC---CCHH
Q psy2378 145 ----DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI---KTKK 217 (956)
Q Consensus 145 ----~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI---~s~~ 217 (956)
+..+++...+-++.+.++|+|.|+++.=+. .+..|.+...++.+....++|..+--+ .++.
T Consensus 102 dF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~------------dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~ 169 (287)
T 3iwp_A 102 DFLYSDREIEVMKADIRLAKLYGADGLVFGALTE------------DGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPM 169 (287)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------TSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHH
T ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCC------------CCCcCHHHHHHHHHHcCCCcEEEECchhccCCHH
Confidence 122344566778889999999999986441 113688888888776546888877653 3566
Q ss_pred HHHHHhhh--cCEEEE
Q psy2378 218 EIDLHLNY--IDGVML 231 (956)
Q Consensus 218 da~~~l~~--ad~Vmi 231 (956)
.+.+.+.. +|.|..
T Consensus 170 ~Ale~Li~lGvdrILT 185 (287)
T 3iwp_A 170 AALETLLTLGFERVLT 185 (287)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEC
Confidence 66655544 887766
No 384
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=90.82 E-value=0.7 Score=47.16 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=53.8
Q ss_pred HHHHHHHHhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-CEEeeCchhhchHHHHHH
Q psy2378 885 LIFEFMLNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-KNIKPTSFGRYFLNDLQQ 951 (956)
Q Consensus 885 ~~~e~~~~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-~~~~lT~~G~~~~~~i~~ 951 (956)
.+.+.++.-.....+++..++.+.++.+....-..++.|.++||+.+.. ..+.||++|+.....+..
T Consensus 6 dYL~~I~~l~~~~~~~~~~~lA~~l~vs~~tvs~~l~~Le~~GlV~r~~~~~i~LT~~G~~~~~~~~~ 73 (214)
T 3hrs_A 6 DYLKCLYELGTRHNKITNKEIAQLMQVSPPAVTEMMKKLLAEELLIKDKKAGYLLTDLGLKLVSDLYR 73 (214)
T ss_dssp HHHHHHHHTTSSCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCHHHHHHHHCCChhHHHHHHHHHHHCCCEEEecCCCeEECHHHHHHHHHHHH
Confidence 4445554433334568999999999999888888999999999998876 679999999999887654
No 385
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.81 E-value=2.3 Score=42.93 Aligned_cols=128 Identities=13% Similarity=0.085 Sum_probs=76.6
Q ss_pred EEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc-cCccEEEEeccCCC
Q psy2378 66 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEIDITVKHRIGID 144 (956)
Q Consensus 66 ~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir~g~~ 144 (956)
+++.+=-.+.++..+.++.+. .|+|.||+.. |.. .. +| .++++++|+. .+.|+.+-+-..
T Consensus 3 li~a~D~~~~~~~~~~~~~~~-~~~diie~G~--p~~--~~--~g----------~~~i~~ir~~~~~~~i~~~~~~~-- 63 (211)
T 3f4w_A 3 LQLALDELTLPEAMVFMDKVV-DDVDIIEVGT--PFL--IR--EG----------VNAIKAIKEKYPHKEVLADAKIM-- 63 (211)
T ss_dssp EEEEECSCCHHHHHHHHHHHG-GGCSEEEECH--HHH--HH--HT----------THHHHHHHHHCTTSEEEEEEEEC--
T ss_pred EEEEeCCCCHHHHHHHHHHhh-cCccEEEeCc--HHH--Hh--cc----------HHHHHHHHHhCCCCEEEEEEEec--
Confidence 333343456777777777664 5899999865 431 11 12 3678888877 478875432221
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcH-HHHHHHHHhCCCceEEE-ecCCCCH-HHHHH
Q psy2378 145 DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY-NFVYNLKKDFPELEIII-NGGIKTK-KEIDL 221 (956)
Q Consensus 145 ~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~-~~i~~v~~~~~~ipVi~-nGgI~s~-~da~~ 221 (956)
+. ...+++.+.++|+|.+++|.-.. ..+. +.+..+++. +++++. .=...++ +.+++
T Consensus 64 ~~-----~~~~~~~~~~~Gad~v~v~~~~~--------------~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~ 122 (211)
T 3f4w_A 64 DG-----GHFESQLLFDAGADYVTVLGVTD--------------VLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRL 122 (211)
T ss_dssp SC-----HHHHHHHHHHTTCSEEEEETTSC--------------HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHH
T ss_pred cc-----hHHHHHHHHhcCCCEEEEeCCCC--------------hhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHH
Confidence 11 12458889999999999996431 0132 334444443 466654 2334565 55777
Q ss_pred Hhhh-cCEEEEcc
Q psy2378 222 HLNY-IDGVMLGR 233 (956)
Q Consensus 222 ~l~~-ad~VmiGR 233 (956)
+.+. +|.|.+..
T Consensus 123 ~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 123 LEEAGADMLAVHT 135 (211)
T ss_dssp HHHHTCCEEEEEC
T ss_pred HHHcCCCEEEEcC
Confidence 7776 99987743
No 386
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.75 E-value=0.63 Score=48.86 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=91.1
Q ss_pred HHHHHHHcCCCEEEecC-CCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTV 159 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~-gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l 159 (956)
.|+.++++|||+|=+-- +.- + .-|+-....-..+.+...+++|.+.++.||++-+..|+.+.. .+.++.+
T Consensus 32 sA~~~~~aG~dai~vg~~s~a--~--~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~-----~~~~~~l 102 (255)
T 2qiw_A 32 SAGLVEEAGFSGLTIGSHPVA--D--ATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP-----ADLIAQI 102 (255)
T ss_dssp HHHHHHHTTCSCEEECHHHHH--H--HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH-----HHHHHHH
T ss_pred HHHHHHHcCCCEEEEChHHHH--H--hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH-----HHHHHHH
Confidence 45677789999997741 111 1 123333334467778888899988899999999999964422 5778888
Q ss_pred HHcCCCEEEEcccccccccCCCCCCCCCCcC--cHHHHHHHHHhCC--CceEEEecCCCC-----------HHH----HH
Q psy2378 160 SSAGCRTFIVHARNAFLKKLNPKQNRKIPIL--KYNFVYNLKKDFP--ELEIIINGGIKT-----------KKE----ID 220 (956)
Q Consensus 160 ~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~--~~~~i~~v~~~~~--~ipVi~nGgI~s-----------~~d----a~ 220 (956)
.++|+++|++-+... ..| + ..-+. ..+.|+.+++... ++|+..+|.... .++ ++
T Consensus 103 ~~aGa~gv~iEd~~~-~~~---k---~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 103 LEAGAVGINVEDVVH-SEG---K---RVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHTTCCEEEECSEEG-GGT---T---EECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHcCCcEEEECCCCC-CCC---C---cccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 899999999976541 000 1 00011 1234444444411 478666666543 222 22
Q ss_pred HHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 221 LHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 221 ~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
.+.+. ||+|++ ..+.++....++.+.+
T Consensus 176 a~~eAGAd~i~~--e~~~~~~~~~~i~~~~ 203 (255)
T 2qiw_A 176 LMEQAGARSVYP--VGLSTAEQVERLVDAV 203 (255)
T ss_dssp HHHHHTCSEEEE--CCCCSHHHHHHHHTTC
T ss_pred HHHHcCCcEEEE--cCCCCHHHHHHHHHhC
Confidence 23333 999998 3355556677766543
No 387
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.72 E-value=1.5 Score=47.91 Aligned_cols=91 Identities=16% Similarity=0.201 Sum_probs=69.5
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 195 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i 195 (956)
+++.+.+.++.+++.++.|+.|.+-.. +. +..+.++.+.+.|++.|.+|... | .+.+
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~-----~~~~~~~~~~~~g~d~V~l~~g~---------------p--~~~~ 117 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV-SP-----WADDLVKVCIEEKVPVVTFGAGN---------------P--TKYI 117 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT-ST-----THHHHHHHHHHTTCSEEEEESSC---------------C--HHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc-CC-----CHHHHHHHHHHCCCCEEEECCCC---------------c--HHHH
Confidence 688899999999998888998876542 11 13567788889999999998653 1 3456
Q ss_pred HHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE-cc
Q psy2378 196 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 233 (956)
Q Consensus 196 ~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi-GR 233 (956)
..+++. ++||+. .+.+++++..+.+. +|+|.+ |+
T Consensus 118 ~~l~~~--g~~v~~--~v~s~~~a~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 118 RELKEN--GTKVIP--VVASDSLARMVERAGADAVIAEGM 153 (326)
T ss_dssp HHHHHT--TCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHc--CCcEEE--EcCCHHHHHHHHHcCCCEEEEECC
Confidence 777764 688885 67899999988877 999988 54
No 388
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.69 E-value=1 Score=48.33 Aligned_cols=128 Identities=11% Similarity=0.006 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 85 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGT----------TGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV--D---SIE 85 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--c---cHH
Confidence 47888999999999999999998753 23333335555577888888776 4788766543 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC--CceEE-Ee-----cCCCCHHHHHHH
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP--ELEII-IN-----GGIKTKKEIDLH 222 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~--~ipVi-~n-----GgI~s~~da~~~ 222 (956)
+++++++.++++|+|++-+..-.. . .. .....-.++.++|.+.+| ++||| .| |--.+++.+.++
T Consensus 86 ~ai~la~~A~~~Gadavlv~~P~y--~---~~---~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~L 157 (294)
T 3b4u_A 86 DAADQSAEALNAGARNILLAPPSY--F---KN---VSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRL 157 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCS--S---CS---CCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcC--C---CC---CCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHH
Confidence 689999999999999998864321 0 00 000112456677888775 69976 44 434578888777
Q ss_pred h
Q psy2378 223 L 223 (956)
Q Consensus 223 l 223 (956)
.
T Consensus 158 a 158 (294)
T 3b4u_A 158 K 158 (294)
T ss_dssp H
T ss_pred H
Confidence 5
No 389
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=90.67 E-value=0.49 Score=41.59 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=47.8
Q ss_pred hhhccCCChhhH----HHHhCCCHHHHHHHHHHHHHCCCeEE----cCCEEeeCchhhchHHHHHHHh
Q psy2378 894 LRLKDGFSPNLF----FERTGINIKIIESKLKNAEKLGLLKR----NNKNIKPTSFGRYFLNDLQQIF 953 (956)
Q Consensus 894 lr~~~gi~~~~~----~~~~g~~~~~~~~~l~~l~~~Gl~~~----~~~~~~lT~~G~~~~~~i~~~f 953 (956)
|....+++..++ .+.++.+....-..++.|++.||+.. ....+.||++|+.+...+...+
T Consensus 17 l~~~~~~~~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~~~r~~~~~LT~~G~~~~~~~~~~~ 84 (99)
T 1tbx_A 17 LYDNEGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQERGEKRLYLTEKGKLFAISLKTAI 84 (99)
T ss_dssp HTTCTTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHcCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEecCCceEEEECHHHHHHHHHHHHHH
Confidence 334466888888 77888887778889999999999987 3356899999999998775543
No 390
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.67 E-value=1.1 Score=47.93 Aligned_cols=127 Identities=14% Similarity=0.020 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++...+.|+|+|=++.. .|-+.. -..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~--Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 83 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGT--------TGEAST--LSMEEHTQVIKEIIRVANKRIPIIAGTGA--N---STR 83 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESST--------TTTGGG--SCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc--------cccccc--CCHHHHHHHHHHHHHHhCCCCeEEEeCCC--C---CHH
Confidence 47788999999888999999987753 122222 34444467777777666 4677764332 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~y--~~---~----~~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3tak_A 84 EAIELTKAAKDLGADAALLVTPYY--NK---P----TQEGLYQHYKAIAEAV-ELPLILYNVPGRTGVDLSNDTAVRLAE 153 (291)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEecccccCCCCCHHHHHHHHc
Confidence 789999999999999998864321 10 0 0111246677888887 79986 43 55567888877763
No 391
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=90.66 E-value=0.36 Score=56.46 Aligned_cols=83 Identities=14% Similarity=0.094 Sum_probs=57.8
Q ss_pred HHHHHHcC---CCEEEEcccccccccCCCCCCCCC-CcCcHHHHHHHHHhC-----CCceEEEecCCCCHHHHHHHhh--
Q psy2378 156 VGTVSSAG---CRTFIVHARNAFLKKLNPKQNRKI-PILKYNFVYNLKKDF-----PELEIIINGGIKTKKEIDLHLN-- 224 (956)
Q Consensus 156 a~~l~~~G---~~~i~vh~r~~~~~g~~~~~~~~~-~~~~~~~i~~v~~~~-----~~ipVi~nGgI~s~~da~~~l~-- 224 (956)
+..+.+.| +|+|.+..=.. ..+ ++ ... ++..++.++++++.+ .++||++-||| +++++.++++
T Consensus 121 a~~A~~~G~~~aDYv~~Gpvf~---T~t-K~-~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~ 194 (540)
T 3nl6_A 121 VDELSKMGPDMVDYIGVGTLFP---TLT-KK-NPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQC 194 (540)
T ss_dssp HHHHHHTCC--CCEEEESCCSC---CCC-CC-----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHC
T ss_pred HHHHHHcCCCCCCEEEEcCCCC---CCC-CC-CcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhh
Confidence 45677889 99999843210 000 11 122 346688888777652 37999999999 7899999996
Q ss_pred ------h-cCEEEEccccccCCcchHH
Q psy2378 225 ------Y-IDGVMLGREAYKNPFLMSN 244 (956)
Q Consensus 225 ------~-ad~VmiGR~~l~~P~l~~~ 244 (956)
. +|+|.++++++..|+....
T Consensus 195 ~~~g~~~GadgvAVvsaI~~a~dp~~a 221 (540)
T 3nl6_A 195 VSSNGKRSLDGICVVSDIIASLDAAKS 221 (540)
T ss_dssp BCTTSSCBCSCEEESHHHHTCTTHHHH
T ss_pred cccccccCceEEEEeHHHhcCCCHHHH
Confidence 5 9999999999986664433
No 392
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=90.65 E-value=0.73 Score=50.27 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=82.7
Q ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCC
Q psy2378 69 QVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDIN 147 (956)
Q Consensus 69 Ql~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~ 147 (956)
.+.+.+|+++++.|+.+.+.||..+-+..|. + ...+.++++|+++ ++.+.+-.-.+|+..
T Consensus 127 ~~~~~~~e~~~~~a~~~~~~G~~~~KiKvg~----------------~--~d~~~v~avr~~~~~~~l~vDaN~~~~~~- 187 (324)
T 1jpd_X 127 TVVIGTPDQMANSASTLWQAGAKLLKVKLDN----------------H--LISERMVAIRTAVPDATLIVDANESWRAE- 187 (324)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------S--CHHHHHHHHHHHCTTSEEEEECTTCCCST-
T ss_pred EeeCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------c--hHHHHHHHHHHhCCCCEEEEECcCCCCHH-
Confidence 4566799999999988888999999986541 1 1245678888776 233333333456543
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhhcC
Q psy2378 148 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYID 227 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~ad 227 (956)
++.++++.|++.++.+|.= . .++.+++..++++ . ++||.+.=.+.+.+++.+++..+|
T Consensus 188 ---~a~~~~~~l~~~~i~~iEq---------------P-~~~~d~~~~~~l~--~-~ipIa~dE~~~~~~~~~~~~~~~~ 245 (324)
T 1jpd_X 188 ---GLAARCQLLADLGVAMLEQ---------------P-LPAQDDAALENFI--H-PLPICADESCHTRSNLKALKGRYE 245 (324)
T ss_dssp ---THHHHHHHHHHTTCCEEEC---------------C-SCTTSCGGGGSSC--C-SSCEEESTTCSSGGGHHHHBTTBS
T ss_pred ---HHHHHHHHHHhCCCCEEEC---------------C-CCCCCHHHHHhcc--C-CCCEEEcCCCCCHHHHHHHHhhCC
Confidence 4778999999999888731 1 1122444333332 3 689998888899999999986677
Q ss_pred EEEE
Q psy2378 228 GVML 231 (956)
Q Consensus 228 ~Vmi 231 (956)
.|.+
T Consensus 246 ~i~i 249 (324)
T 1jpd_X 246 MVNI 249 (324)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 393
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=90.54 E-value=1 Score=49.40 Aligned_cols=126 Identities=12% Similarity=0.005 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~--~---st~ 113 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGS----------GGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG--T---NAR 113 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS--S---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 47888999999999999999988753 23333334555567777777666 4677765432 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
+++++++.++++|+|++-+..-.. .. . ....-+++.++|.+++ ++||| .| |--.+++.+.++.
T Consensus 114 eai~la~~A~~~Gadavlv~~P~Y--~~---~----s~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 114 ETIELSQHAQQAGADGIVVINPYY--WK---V----SEANLIRYFEQVADSV-TLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCSS--SC---C----CHHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 789999999999999998864321 00 0 0011245667788877 69976 34 4345788887775
No 394
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=90.49 E-value=1 Score=48.79 Aligned_cols=127 Identities=11% Similarity=0.024 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~--~---st~ 104 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGT----------TGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS--N---STS 104 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC--C---CHH
Confidence 47889999999999999999987643 22223334444567777777665 4677774432 1 245
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.+.|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 105 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 105 EAVELAKHAEKAGADAVLVVTPYY--NR---P----NQRGLYTHFSSIAKAI-SIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHcC-CCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 789999999999999998864321 10 0 0011246667888887 78975 43 54557888877765
No 395
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.44 E-value=1.6 Score=47.05 Aligned_cols=127 Identities=14% Similarity=0.069 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---st~ 98 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGT----------TGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGT--N---NTR 98 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC--S---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCC--C---CHH
Confidence 47888999999999999999988753 22233334445567777777666 3677655432 2 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-. +.. . ....-.++.++|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 99 ~ai~la~~A~~~Gadavlv~~P~--y~~---~----~~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 99 TSVELAEAAASAGADGLLVVTPY--YSK---P----SQEGLLAHFGAIAAAT-EVPICLYDIPGRSGIPIESDTMRRLSE 168 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--SSC---C----CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 78999999999999999886432 100 0 0011245667788887 69976 34 43357888777753
No 396
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.42 E-value=1.2 Score=47.80 Aligned_cols=101 Identities=8% Similarity=-0.013 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 153 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~ 153 (956)
+++...+.|+...+.|+|.||||+|.+.. .-....+.+..+++++++.+++|++|-..- .
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~~v---------~~~eem~rvv~~i~~~~~~~~vpisIDT~~-----------~ 94 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDGLL---------DARTEMTTFLNLIMSEPEIARVPVMIDSSK-----------W 94 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCTTS---------CHHHHHHHHHHHHHTCHHHHTSCEEEECSC-----------H
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCC---------CHHHHHHHHHHHHHHhhhcCCCeEEEeCCC-----------H
Confidence 56777888888888999999999864310 011123344444444445678999986432 2
Q ss_pred HHHHHHHH--cCCCEEE-EcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE
Q psy2378 154 DFVGTVSS--AGCRTFI-VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 209 (956)
Q Consensus 154 ~~a~~l~~--~G~~~i~-vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~ 209 (956)
+++++..+ +|++.|. |++... ...++.+..+.+.. +.|||+
T Consensus 95 ~V~eaaL~~~~Ga~iINdIs~~~~--------------d~~~~~~~~l~a~~-ga~vV~ 138 (300)
T 3k13_A 95 EVIEAGLKCLQGKSIVNSISLKEG--------------EEVFLEHARIIKQY-GAATVV 138 (300)
T ss_dssp HHHHHHHHHCSSCCEEEEECSTTC--------------HHHHHHHHHHHHHH-TCEEEE
T ss_pred HHHHHHHHhcCCCCEEEeCCcccC--------------ChhHHHHHHHHHHh-CCeEEE
Confidence 45555555 6988775 443320 12344455555555 678775
No 397
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=90.28 E-value=2.3 Score=45.54 Aligned_cols=143 Identities=11% Similarity=0.136 Sum_probs=85.9
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEec
Q psy2378 62 EEHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 140 (956)
Q Consensus 62 ~~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 140 (956)
..-|+++++= |.+.+...+| .++||+-|.+-. .--.+..|-+...++++...+. ++.|-.-+.
T Consensus 73 ~~VPValHLDHg~~~e~~~~a----i~~GFtSVMiDg-----------S~~p~eeNi~~Tk~vv~~ah~~-gvsVEaELG 136 (307)
T 3n9r_A 73 PHIPVALHLDHGTTFESCEKA----VKAGFTSVMIDA-----------SHHAFEENLELTSKVVKMAHNA-GVSVEAELG 136 (307)
T ss_dssp TTSCEEEEEEEECSHHHHHHH----HHHTCSEEEECC-----------TTSCHHHHHHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCCcEEEECCCCCCHHHHHHH----HHhCCCcEEEEC-----------CCCCHHHHHHHHHHHHHHHHHc-CCeEEEEee
Confidence 3467777773 4555444333 346777777643 2223456777888888877753 655555543
Q ss_pred c-C-CCCC-------CcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 141 I-G-IDDI-------NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 141 ~-g-~~~~-------~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
. | .+++ ..+-+..+..+-+++.|+|+|.+.-+|. ...|.++ ..+..+++.++++++.. ++|++.-|
T Consensus 137 ~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~-HG~Yk~~---~~p~Ld~~~L~~I~~~~-~~PLVlHG 211 (307)
T 3n9r_A 137 RLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTS-HGAFKFK---GEPKLDFERLQEVKRLT-NIPLVLHG 211 (307)
T ss_dssp CCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCC-SSSBCCS---SSCCCCHHHHHHHHHHH-CSCEEESS
T ss_pred eeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCc-ccccCCC---CCCccCHHHHHHHHhcC-CCCeEEeC
Confidence 2 2 1111 0011123444446778999999987763 1112111 12458999999997765 79999999
Q ss_pred CCCCHHHHHHHhhh
Q psy2378 212 GIKTKKEIDLHLNY 225 (956)
Q Consensus 212 gI~s~~da~~~l~~ 225 (956)
+-.-|++..+.+..
T Consensus 212 gS~vp~~~~~~~~~ 225 (307)
T 3n9r_A 212 ASAIPDNVRKSYLD 225 (307)
T ss_dssp CCCCCHHHHHHHHH
T ss_pred CCCcchHHHHHHHH
Confidence 98778887777765
No 398
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=90.27 E-value=1.3 Score=47.53 Aligned_cols=127 Identities=9% Similarity=-0.009 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcH
Q psy2378 73 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 149 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~-~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~ 149 (956)
-|.+.+.+-++...+ .|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +.
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t 85 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGS----------TGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS--V---NL 85 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC--S---CH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC--C---CH
Confidence 477889999998888 99999988742 23333334555567777777766 3677655432 2 23
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
.+++++++.++++|+|++-+..-. +.. . ....-.++.+.|.+.+ ++||| .| |--.+++.+.++.
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~--y~~---~----~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 155 (293)
T 1f6k_A 86 KEAVELGKYATELGYDCLSAVTPF--YYK---F----SFPEIKHYYDTIIAET-GSNMIVYSIPFLTGVNMGIEQFGELY 155 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCC--SSC---C----CHHHHHHHHHHHHHHH-CCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCC--CCC---C----CHHHHHHHHHHHHHhC-CCCEEEEECccccCcCCCHHHHHHHh
Confidence 578999999999999999886432 110 0 0011245667777777 68975 45 4335788877775
Q ss_pred h
Q psy2378 224 N 224 (956)
Q Consensus 224 ~ 224 (956)
+
T Consensus 156 ~ 156 (293)
T 1f6k_A 156 K 156 (293)
T ss_dssp T
T ss_pred c
Confidence 3
No 399
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=90.25 E-value=0.47 Score=41.56 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=45.3
Q ss_pred CChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-C---EEeeCchhhchHHHHHHHh
Q psy2378 900 FSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-K---NIKPTSFGRYFLNDLQQIF 953 (956)
Q Consensus 900 i~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-~---~~~lT~~G~~~~~~i~~~f 953 (956)
++..++.+..+.+.......++.|++.||+.... . .++||++|+.+...+...+
T Consensus 31 ~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~~~~d~R~~~v~LT~~G~~~~~~~~~~~ 88 (95)
T 2qvo_A 31 VYIQYIASKVNSPHSYVWLIIKKFEEAKMVECELEGRTKIIRLTDKGQKIAQQIKSII 88 (95)
T ss_dssp EEHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHCcCHHHHHHHHHHHHHCcCccCCCCCCeEEEEEChhHHHHHHHHHHHH
Confidence 8889999999998888888999999999994432 2 4899999999998876654
No 400
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=90.24 E-value=4.3 Score=41.60 Aligned_cols=138 Identities=14% Similarity=0.051 Sum_probs=81.3
Q ss_pred HHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHH
Q psy2378 82 AKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 82 A~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~ 161 (956)
+..++++|+|.|-|+.++- +..+| .+.+.++...+. ++-+.|-+ |. ..+. +.+..
T Consensus 81 ~~~l~~~Ga~~VllghseR-----R~~~~--------e~~~k~~~A~~~-GL~~ivcV--ge--------~~e~-~~~~~ 135 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSEN-----RMILA--------DLEAAIRRAEEV-GLMTMVCS--NN--------PAVS-AAVAA 135 (225)
T ss_dssp HHHHHHTTCCEEEESCGGG-----CCBHH--------HHHHHHHHHHHH-TCEEEEEE--SS--------HHHH-HHHHT
T ss_pred HHHHHHcCCCEEEECcchh-----cCCHH--------HHHHHHHHHHHC-CCEEEEEe--CC--------HHHH-HHHhc
Confidence 3467789999999986531 11111 134444444432 54443333 21 1121 44566
Q ss_pred cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHH-HHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 162 AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYN-LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 162 ~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~-v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
.+.+.|-+-.|.. -| +|.+-..-.+.+.+.+.+ +++..++++|+.-|+|++.++++.+... +||+.||.+++.-+
T Consensus 136 ~~~~iIayep~wa--iG-tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~ 212 (225)
T 1hg3_A 136 LNPDYVAVEPPEL--IG-TGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAK 212 (225)
T ss_dssp TCCSEEEECCTTT--TT-TSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCS
T ss_pred CCCCEEEEeChhh--hc-cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCc
Confidence 7888888888752 33 120000111111333333 3333346899999999999999888777 99999999999887
Q ss_pred cchHHHHH
Q psy2378 240 FLMSNFDL 247 (956)
Q Consensus 240 ~l~~~i~~ 247 (956)
++...+++
T Consensus 213 ~~~~~i~~ 220 (225)
T 1hg3_A 213 DPEKAIWD 220 (225)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 76665554
No 401
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=90.22 E-value=1.1 Score=52.16 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=55.6
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..+.++.|.++|+|.|.+..-.. . ...-++.++++++.+|++||+ .|+|.+.++++.+.+. +|+|.
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g-------~-----~~~v~~~i~~i~~~~~~~~vi-~g~v~t~e~a~~~~~aGad~i~ 323 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG-------H-----SQGVIDKVKEVRAKYPSLNII-AGNVATAEATKALIEAGANVVK 323 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT-------T-----SHHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHhhccceEEeccccc-------c-----hhhhhhHHHHHHHhCCCceEE-eeeeccHHHHHHHHHhCCCEEE
Confidence 45678889999999999975431 0 012457899999998778888 4789999999999988 99999
Q ss_pred Ecccc
Q psy2378 231 LGREA 235 (956)
Q Consensus 231 iGR~~ 235 (956)
+|-+.
T Consensus 324 vg~g~ 328 (511)
T 3usb_A 324 VGIGP 328 (511)
T ss_dssp ECSSC
T ss_pred ECCCC
Confidence 86554
No 402
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=90.22 E-value=3.4 Score=45.70 Aligned_cols=131 Identities=7% Similarity=-0.011 Sum_probs=86.8
Q ss_pred EEEEec---CCCHHHHHHHHHHHHHcCCCEEEecCCCCcc--------eeeeCcccccc-------cCChHHHHHHHHHH
Q psy2378 66 IAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSN--------RVQNGFFGAIL-------MTKPLLVSDCIKAM 127 (956)
Q Consensus 66 ~~vQl~---g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~--------~~~~~~~G~~l-------~~~~~~~~eiv~~v 127 (956)
+|.-++ ..+.+...+.++.|+++|+|+|-...-.|-. .+..+++|..+ .-..+... .+...
T Consensus 31 IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~-~L~~~ 109 (385)
T 1vli_A 31 IIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWIL-PLLDY 109 (385)
T ss_dssp EEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHH-HHHHH
T ss_pred EEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHH-HHHHH
Confidence 556664 3477888888899999999999997654422 22222233222 12334443 44555
Q ss_pred hhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceE
Q psy2378 128 RDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEI 207 (956)
Q Consensus 128 ~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipV 207 (956)
++..|+++. ..-||. +-+..|++.|++.+-|..|.- .|+.+++++.+. +.||
T Consensus 110 ~~~~Gi~~~---stpfD~--------~svd~l~~~~vd~~KIgS~~~---------------~N~pLL~~va~~--gKPV 161 (385)
T 1vli_A 110 CREKQVIFL---STVCDE--------GSADLLQSTSPSAFKIASYEI---------------NHLPLLKYVARL--NRPM 161 (385)
T ss_dssp HHHTTCEEE---CBCCSH--------HHHHHHHTTCCSCEEECGGGT---------------TCHHHHHHHHTT--CSCE
T ss_pred HHHcCCcEE---EccCCH--------HHHHHHHhcCCCEEEECcccc---------------cCHHHHHHHHhc--CCeE
Confidence 555688874 223332 234568889999999998862 489999999874 6899
Q ss_pred EEecCCCCHHHHHHHhhh
Q psy2378 208 IINGGIKTKKEIDLHLNY 225 (956)
Q Consensus 208 i~nGgI~s~~da~~~l~~ 225 (956)
|.+=|..|.+++..+.+.
T Consensus 162 iLStGmaTl~Ei~~Ave~ 179 (385)
T 1vli_A 162 IFSTAGAEISDVHEAWRT 179 (385)
T ss_dssp EEECTTCCHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHH
Confidence 999999999998776654
No 403
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=90.19 E-value=1.1 Score=48.21 Aligned_cols=127 Identities=11% Similarity=0.009 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+.. .+..
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-----~~t~ 82 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGT----------TGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-----NNPV 82 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-----SSHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-----CCHH
Confidence 47788999999888999999988742 23333334555567777777665 3677765432 1235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++||| .| |--.+++.+.++.+
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 83 EAVRYAQHAQQAGADAVLCVAGYY--NR---P----SQEGLYQHFKMVHDAI-DIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCTT--TC---C----CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 789999999999999998864321 00 0 0011245667788887 69976 45 54457888877753
No 404
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.13 E-value=0.5 Score=55.12 Aligned_cols=69 Identities=17% Similarity=0.367 Sum_probs=55.5
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..+.++.+.++|+|.|.+|... |. +...|+.++++++.+|++||++ |++.+.++|+.+.+. +|+|.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~----G~--------~~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~ 322 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQ----GN--------SVYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLR 322 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC----CC--------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccC----Cc--------chhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEE
Confidence 4567788899999999998643 11 0135788999999987899986 788999999999888 99998
Q ss_pred Ecc
Q psy2378 231 LGR 233 (956)
Q Consensus 231 iGR 233 (956)
+|.
T Consensus 323 vg~ 325 (514)
T 1jcn_A 323 VGM 325 (514)
T ss_dssp ECS
T ss_pred ECC
Confidence 865
No 405
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=90.10 E-value=3.7 Score=42.59 Aligned_cols=138 Identities=10% Similarity=0.063 Sum_probs=85.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccc---cccCChHHHHHHHHHHhhccCccEEEEe
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGA---ILMTKPLLVSDCIKAMRDSVEIDITVKH 139 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~---~l~~~~~~~~eiv~~v~~~~~~pv~vKi 139 (956)
+-++++|...-....+.++.+.++++||++||+...-|.. .++.+ ....++..+.++-+.+++ .++.++.=.
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~ 83 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLG----GKWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGTG 83 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECC----GGGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccc----cccccccccccCCHHHHHHHHHHHHH-cCCeEEEEe
Confidence 3467888876555568888888899999999997653311 11111 112346666666555554 476665432
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE---ec-C-CC
Q psy2378 140 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII---NG-G-IK 214 (956)
Q Consensus 140 r~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~---nG-g-I~ 214 (956)
-. .+. ..+.+.+.++.+.+.|+..|.+|... ..|..+.++.+.. ++.+.. .+ . ..
T Consensus 84 ~~-~~~--~~~~~~~~i~~A~~lGa~~v~~~~~~----------------~~~~~l~~~a~~~-gv~l~~En~~~~~~~~ 143 (262)
T 3p6l_A 84 VY-VAE--KSSDWEKMFKFAKAMDLEFITCEPAL----------------SDWDLVEKLSKQY-NIKISVHNHPQPSDYW 143 (262)
T ss_dssp EE-CCS--STTHHHHHHHHHHHTTCSEEEECCCG----------------GGHHHHHHHHHHH-TCEEEEECCSSSSSSS
T ss_pred cc-CCc--cHHHHHHHHHHHHHcCCCEEEecCCH----------------HHHHHHHHHHHHh-CCEEEEEeCCCccccC
Confidence 22 111 22356778888899999999998532 3677777777654 454431 11 1 24
Q ss_pred CHHHHHHHhhh
Q psy2378 215 TKKEIDLHLNY 225 (956)
Q Consensus 215 s~~da~~~l~~ 225 (956)
+++++.++++.
T Consensus 144 ~~~~~~~ll~~ 154 (262)
T 3p6l_A 144 KPENLLKAISG 154 (262)
T ss_dssp SHHHHHHHHTT
T ss_pred CHHHHHHHHHh
Confidence 78888888763
No 406
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.03 E-value=2.6 Score=44.89 Aligned_cols=159 Identities=11% Similarity=0.005 Sum_probs=91.4
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVS 160 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~ 160 (956)
.|+.++++|||+|=+--+ ...++ .-|+-....-..+.+...++.|.+.++.||.+-+..|+. +.++..+.++.++
T Consensus 33 sA~i~e~aGf~ai~vs~s-~~a~~-~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg---~~~~~~~~v~~l~ 107 (287)
T 3b8i_A 33 SARIAADLGFECGILGGS-VASLQ-VLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG---NALNVMRTVVELE 107 (287)
T ss_dssp HHHHHHHTTCSCEEECHH-HHHHH-HHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS---SHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcH-HHHHH-hcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC---CHHHHHHHHHHHH
Confidence 466778899999977311 00000 011111123456778888899999999999999999965 2346788899999
Q ss_pred HcCCCEEEEcccccc-cccCCCCCCCCCCcCc--HHHHHHHHHhC--CCceEEEecCC--C----CHHHHHHHhhh-cCE
Q psy2378 161 SAGCRTFIVHARNAF-LKKLNPKQNRKIPILK--YNFVYNLKKDF--PELEIIINGGI--K----TKKEIDLHLNY-IDG 228 (956)
Q Consensus 161 ~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~~~--~~~i~~v~~~~--~~ipVi~nGgI--~----s~~da~~~l~~-ad~ 228 (956)
++|+++|++-..... ..|+.+ .. .-+.. .+.|+.+++.- ++.-|++=-+- . ..+++..+.+. ||+
T Consensus 108 ~aGa~gv~iED~~~pKrcgh~~--gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~ 184 (287)
T 3b8i_A 108 RAGIAALTIEDTLLPAQFGRKS--TD-LICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADG 184 (287)
T ss_dssp HHTCSEEEEECBCCSCCTTTCT--TC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSE
T ss_pred HhCCeEEEEcCCCCccccCCCC--CC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCE
Confidence 999999999865420 011111 11 11111 23444444442 22334443332 1 11223334444 999
Q ss_pred EEEccccccCCcchHHHHHhh
Q psy2378 229 VMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 229 VmiGR~~l~~P~l~~~i~~~~ 249 (956)
|++= .+.++....++.+.+
T Consensus 185 i~~e--~~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 185 ICLV--GVRDFAHLEAIAEHL 203 (287)
T ss_dssp EEEE--CCCSHHHHHHHHTTC
T ss_pred EEec--CCCCHHHHHHHHHhC
Confidence 9884 255666777776644
No 407
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=89.95 E-value=0.61 Score=50.22 Aligned_cols=69 Identities=22% Similarity=0.285 Sum_probs=49.0
Q ss_pred HHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHH-HHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccc
Q psy2378 157 GTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN-FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~-~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~ 234 (956)
+...++|+|.|-++... +.++. .++.++...|++||.++||| +++.+.++.+. +|++.+|..
T Consensus 211 ~~A~~aGaD~I~ld~~~---------------~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~ 274 (299)
T 2jbm_A 211 VQAAEAGADLVLLDNFK---------------PEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMGML 274 (299)
T ss_dssp HHHHHTTCSEEEEESCC---------------HHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECTHH
T ss_pred HHHHHcCCCEEEECCCC---------------HHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEEChh
Confidence 34456899999887521 22332 22334444567999999999 89999999988 999999996
Q ss_pred cccCCcc
Q psy2378 235 AYKNPFL 241 (956)
Q Consensus 235 ~l~~P~l 241 (956)
....|++
T Consensus 275 i~~a~~~ 281 (299)
T 2jbm_A 275 TQAAPAL 281 (299)
T ss_dssp HHSCCCC
T ss_pred hcCCCCc
Confidence 5554554
No 408
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.93 E-value=0.97 Score=48.70 Aligned_cols=126 Identities=6% Similarity=-0.027 Sum_probs=81.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+... +..
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~-----~t~ 86 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLGS----------TGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAST-----SVA 86 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTSG----------GGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEES-----SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC-----CHH
Confidence 47888999999999999999977642 23223334444566777777665 47887765431 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.+.|.+.+ ++||+ .| |--.+++.+.++.
T Consensus 87 ~ai~la~~a~~~Gadavlv~~P~y--~~---~----~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 87 DAVAQAKLYEKLGADGILAILEAY--FP---L----KDAQIESYFRAIADAV-EIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECCS--SC---C----CHHHHHHHHHHHHHHC-SSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCC--CC---C----CHHHHHHHHHHHHHHC-CCCEEEEECccccCCCCCHHHHHHHH
Confidence 789999999999999998864321 00 0 0011245667777777 58875 44 3334677776663
No 409
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.88 E-value=1.5 Score=46.92 Aligned_cols=178 Identities=13% Similarity=0.113 Sum_probs=96.4
Q ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecC-CCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE
Q psy2378 60 NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK 138 (956)
Q Consensus 60 ~~~~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~-gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK 138 (956)
+..+.|++ =+..-|+- .|+.++++|||+|=+-- ++-. .-|+-....-..+.+...++.|.+.+++||.+-
T Consensus 15 ~~~~~~i~-~~~a~D~~----sA~~~~~aG~~ai~vsg~~~a~----~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD 85 (295)
T 1s2w_A 15 LNSKDLEF-IMEAHNGL----SARIVQEAGFKGIWGSGLSVSA----QLGVRDSNEASWTQVVEVLEFMSDASDVPILLD 85 (295)
T ss_dssp HHSSSCEE-EEEECSHH----HHHHHHHHTCSCEEECCHHHHH----TC---------CHHHHHHHHHHHHTCSSCEEEE
T ss_pred HhCCCcEE-EecCCCHH----HHHHHHHcCCCEEEeChHHHHH----hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEec
Confidence 33444432 24444543 45667778999997741 1111 011111122345667778888888899999999
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc-ccccCCCCCCCCCCcCc--HHHHHHHHHhC--CCceEEEecCC
Q psy2378 139 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA-FLKKLNPKQNRKIPILK--YNFVYNLKKDF--PELEIIINGGI 213 (956)
Q Consensus 139 ir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~-~~~g~~~~~~~~~~~~~--~~~i~~v~~~~--~~ipVi~nGgI 213 (956)
+..|+.+ .++..+.++.++++|+++|++-.... -..|+.+......-|.. .+.|+.+++.. ++.-|++=-+-
T Consensus 86 ~d~Gyg~---~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda 162 (295)
T 1s2w_A 86 ADTGYGN---FNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEA 162 (295)
T ss_dssp CCSSCSS---HHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECT
T ss_pred CCCCCCC---HHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH
Confidence 9999653 24678889999999999999976541 01111110001111111 33444444443 23344444343
Q ss_pred C-C---HHH----HHHHhhh-cCEEEEccccccCCcchHHHHHhhc
Q psy2378 214 K-T---KKE----IDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYY 250 (956)
Q Consensus 214 ~-s---~~d----a~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~ 250 (956)
. . .++ +..+.+. ||+|++=- .+.++....++.+.+.
T Consensus 163 ~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~-~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 163 FIAGWGLDEALKRAEAYRNAGADAILMHS-KKADPSDIEAFMKAWN 207 (295)
T ss_dssp TTTTCCHHHHHHHHHHHHHTTCSEEEECC-CSSSSHHHHHHHHHHT
T ss_pred HhccccHHHHHHHHHHHHHcCCCEEEEcC-CCCCHHHHHHHHHHcC
Confidence 3 1 133 3333344 99999831 2456778888887664
No 410
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=89.87 E-value=2 Score=47.65 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=68.3
Q ss_pred HHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccccc--------ccCC-C-C------CC----
Q psy2378 125 KAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFL--------KKLN-P-K------QN---- 184 (956)
Q Consensus 125 ~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~--------~g~~-~-~------~~---- 184 (956)
+.+.+..+.|.++.+-.+.+. +...+++++++++|+++|.|+.-+... .++. + . .+
T Consensus 115 eev~~~~~~~~~~QLy~~~d~----~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~ 190 (370)
T 1gox_A 115 EEVASTGPGIRFFQLYVYKDR----NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLG 190 (370)
T ss_dssp HHHHTTCCCCEEEEECCBSSH----HHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC
T ss_pred HHHHhhcCCCceEEEecCCCc----hHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhh
Confidence 334444446777776554433 345788999999999999987443211 0110 0 0 00
Q ss_pred ----------------CCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEc
Q psy2378 185 ----------------RKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 185 ----------------~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiG 232 (956)
...+...|+.+.++++.+ ++||+. +++.++++++.+.+. +|+|.++
T Consensus 191 ~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~-~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs 253 (370)
T 1gox_A 191 KMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTIT-SLPILV-KGVITAEDARLAVQHGAAGIIVS 253 (370)
T ss_dssp ---------HHHHHHHTBCTTCCHHHHHHHHHHC-CSCEEE-ECCCSHHHHHHHHHTTCSEEEEC
T ss_pred ccccccCccHHHHHHhhcCccchHHHHHHHHHHh-CCCEEE-EecCCHHHHHHHHHcCCCEEEEC
Confidence 012345788999999988 799994 778899999999988 9999884
No 411
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=89.86 E-value=1.3 Score=41.55 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=51.8
Q ss_pred HHHHHHhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-CEEeeCchhhchHHHHHH
Q psy2378 887 FEFMLNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-KNIKPTSFGRYFLNDLQQ 951 (956)
Q Consensus 887 ~e~~~~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-~~~~lT~~G~~~~~~i~~ 951 (956)
.+.++.-+....+++...+.+.+|.+...+...++.|.+.||+.... ..+.||++|+.+...+..
T Consensus 10 L~~i~~l~~~~~~~~~~ela~~l~vs~~tvs~~l~~Le~~Glv~r~~~~~~~LT~~g~~~~~~~~~ 75 (142)
T 1on2_A 10 IEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVY 75 (142)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeeCceEEEchhHHHHHHHHHH
Confidence 34444333445679999999999999888888999999999998754 789999999998876543
No 412
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=89.86 E-value=3.9 Score=42.55 Aligned_cols=140 Identities=13% Similarity=0.202 Sum_probs=80.2
Q ss_pred CCCEE--EEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCc--c-E-E
Q psy2378 63 EHPIA--FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI--D-I-T 136 (956)
Q Consensus 63 ~~p~~--vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~--p-v-~ 136 (956)
+.+++ +-+. ..|+....+++.+.++|+|.|-+|.-. | ++.+...++.+++. +. | + .
T Consensus 65 ~~~v~lD~kl~-Dip~t~~~~i~~~~~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~-G~~~~~~l~ 126 (245)
T 1eix_A 65 GFDIFLDLKFH-DIPNTAAHAVAAAADLGVWMVNVHASG----------G------ARMMTAAREALVPF-GKDAPLLIA 126 (245)
T ss_dssp TCCEEEEEEEC-SCHHHHHHHHHHHHHHTCSEEEEBGGG----------C------HHHHHHHHHTTGGG-GGGCCEEEE
T ss_pred CCcEEEEeecc-ccHHHHHHHHHHHHhCCCCEEEEeccC----------C------HHHHHHHHHHHHHc-CCCCCcEEE
Confidence 34455 4444 667777777888888999999999632 1 23455666776653 32 4 1 1
Q ss_pred EEeccCCCC---------CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceE
Q psy2378 137 VKHRIGIDD---------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEI 207 (956)
Q Consensus 137 vKir~g~~~---------~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipV 207 (956)
|......+. ....+....++..-.+.|.+.+... .++ ++++++..++.++
T Consensus 127 v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~--------------------~~e-i~~lr~~~~~~~i 185 (245)
T 1eix_A 127 VTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCS--------------------AQE-AVRFKQVFGQEFK 185 (245)
T ss_dssp ECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECC--------------------GGG-HHHHHHHHCSSSE
T ss_pred EEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeC--------------------HHH-HHHHHHhcCCCCE
Confidence 222122100 0111112222222344565554221 123 6666665544689
Q ss_pred EEecCCCCHH-----------HHHHHhhh-cCEEEEccccccCCcch
Q psy2378 208 IINGGIKTKK-----------EIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 208 i~nGgI~s~~-----------da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
+..|||.. + .+.++++. +|.+.+||+.+..|+..
T Consensus 186 ~v~gGI~~-~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~ 231 (245)
T 1eix_A 186 LVTPGIRP-QGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPA 231 (245)
T ss_dssp EEECCBCC-TTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHH
T ss_pred EEECCcCC-CCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHH
Confidence 99999973 3 46667766 99999999999876643
No 413
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=89.73 E-value=0.69 Score=49.28 Aligned_cols=77 Identities=16% Similarity=0.169 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccc---cccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGA---ILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~---~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~ 150 (956)
+++...+.|+...+.|+|.||||+-+.-| |+ +.....+.+..+++++++.+++||+|-..-
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrP-------ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~--------- 99 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRP-------GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSK--------- 99 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCST-------TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC---------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCC---------
Confidence 57888888888888999999999843211 22 123456778889999988889999886432
Q ss_pred HHHHHHHHHHHcCCCEEE
Q psy2378 151 FVRDFVGTVSSAGCRTFI 168 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~ 168 (956)
.+++++..++|++.|.
T Consensus 100 --~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 100 --PEVIRESAKVGAHIIN 115 (282)
T ss_dssp --HHHHHHHHHTTCCEEE
T ss_pred --HHHHHHHHHcCCCEEE
Confidence 2667777888999985
No 414
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=89.70 E-value=4.8 Score=41.67 Aligned_cols=144 Identities=17% Similarity=0.257 Sum_probs=85.9
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEE--
Q psy2378 62 EEHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDIT-- 136 (956)
Q Consensus 62 ~~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~-- 136 (956)
.+.++++=+- +.-|.....+++.+.++|+|.|-+|.. || ++.+...++..++.- +.|..
T Consensus 58 ~g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~~-----------~G-----~~~~~~a~~~~~~~~~~~~~~l~~ 121 (239)
T 3tr2_A 58 KGYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHIS-----------GG-----RTMMETVVNALQSITLKEKPLLIG 121 (239)
T ss_dssp TTCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG-----------GC-----HHHHHHHHHHHHTCCCSSCCEEEE
T ss_pred cCCCEEEEecccccchHHHHHHHHHHhCCCCEEEEecc-----------CC-----HHHHHHHHHHHHhcCcCCCceEEE
Confidence 3567776664 445666677788889999999999852 22 344455555544321 12322
Q ss_pred --EEeccC--------CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCce
Q psy2378 137 --VKHRIG--------IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELE 206 (956)
Q Consensus 137 --vKir~g--------~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ip 206 (956)
+-.+.+ .. ....+...++++...++|++.+.+++.. +..+++..++-.
T Consensus 122 Vt~LTS~~~~~l~~~g~~-~~~~~~v~~~A~~a~~~g~~GvV~s~~e---------------------~~~ir~~~~~~f 179 (239)
T 3tr2_A 122 VTILTSLDGSDLKTLGIQ-EKVPDIVCRMATLAKSAGLDGVVCSAQE---------------------AALLRKQFDRNF 179 (239)
T ss_dssp ECSCTTCCHHHHHHTTCC-SCHHHHHHHHHHHHHHHTCCEEECCHHH---------------------HHHHHTTCCTTS
T ss_pred EEEEeeCCHHHHHhcCCC-CCHHHHHHHHHHHHHHcCCCEEEECchh---------------------HHHHHHhcCCCc
Confidence 222221 11 1112445678888888999999876432 244666654334
Q ss_pred EEEecCCCCHH-H---------HHHHhhh-cCEEEEccccccCCcchH
Q psy2378 207 IIINGGIKTKK-E---------IDLHLNY-IDGVMLGREAYKNPFLMS 243 (956)
Q Consensus 207 Vi~nGgI~s~~-d---------a~~~l~~-ad~VmiGR~~l~~P~l~~ 243 (956)
++.+.||.-.. + +.++++. +|.+.+||+.+..++-..
T Consensus 180 l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~ 227 (239)
T 3tr2_A 180 LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLK 227 (239)
T ss_dssp EEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHH
Confidence 66677775221 1 4455666 999999999988665443
No 415
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=89.68 E-value=2.4 Score=44.66 Aligned_cols=139 Identities=16% Similarity=0.089 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHcCCCEE-EecC------C---CCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCC
Q psy2378 75 PKKLAKSAKIIQKWGYDEI-NLNC------G---CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 144 (956)
Q Consensus 75 ~~~~~~aA~~~~~~G~d~I-eiN~------g---CP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~ 144 (956)
.+.+....+.+++.|...+ |+.- - ++.- .-|+..+.+..++.++.+ .+.||.+|.....
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~-----kIga~~~~n~~ll~~~a~-----~~kPV~lk~G~~~- 141 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYSDIL-----QIGARNSQNFELLKEVGK-----VENPVLLKRGMGN- 141 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEE-----EECGGGTTCHHHHHHHTT-----SSSCEEEECCTTC-
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhCCEE-----EECcccccCHHHHHHHHh-----cCCcEEEecCCCC-
Confidence 6666666666666665432 2210 0 2222 246677888877666543 6999999866532
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEE-cccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC----CCC--HH
Q psy2378 145 DINSYDFVRDFVGTVSSAGCRTFIV-HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG----IKT--KK 217 (956)
Q Consensus 145 ~~~~~~~~~~~a~~l~~~G~~~i~v-h~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg----I~s--~~ 217 (956)
++++....+..+...|...+++ |.+.. . ..++.....|+..+..+++.+ ++|||+.-+ ..+ +.
T Consensus 142 ---t~~e~~~Av~~i~~~Gn~~i~L~~RG~~---~---~~~y~~~~v~L~ai~~lk~~~-~~pVi~d~sH~~g~~~~v~~ 211 (262)
T 1zco_A 142 ---TIQELLYSAEYIMAQGNENVILCERGIR---T---FETATRFTLDISAVPVVKELS-HLPIIVDPSHPAGRRSLVIP 211 (262)
T ss_dssp ---CHHHHHHHHHHHHTTTCCCEEEEECCBC---C---SCCSSSSBCCTTHHHHHHHHB-SSCEEECSSTTTCSGGGHHH
T ss_pred ---CHHHHHHHHHHHHHCCCCeEEEEECCCC---C---CCCcChhhcCHHHHHHHHhhh-CCCEEEEcCCCCCccchHHH
Confidence 3456778888899999865555 52210 0 112233346888888999886 789865322 211 12
Q ss_pred HHHHHhhh-cCEEEEccc
Q psy2378 218 EIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 218 da~~~l~~-ad~VmiGR~ 234 (956)
-+....+. +||+||=+=
T Consensus 212 ~~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 212 LAKAAYAIGADGIMVEVH 229 (262)
T ss_dssp HHHHHHHTTCSEEEEEBC
T ss_pred HHHHHHHcCCCEEEEEec
Confidence 34444544 999999664
No 416
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=89.60 E-value=1 Score=45.96 Aligned_cols=136 Identities=13% Similarity=0.222 Sum_probs=80.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEec
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHR 140 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir 140 (956)
+.++++=+= +.-|.....+++.+.++|+|+|-+|. +++ .+ +++...+... .-+.|-.-
T Consensus 58 ~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~-----------~~G-----~~----~l~~~~~~~~~~~~~V~~l 117 (213)
T 1vqt_A 58 NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHS-----------CAG-----YE----SVERALSATDKHVFVVVKL 117 (213)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEG-----------GGC-----HH----HHHHHHHHCSSEEEEECCC
T ss_pred CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEec-----------cCC-----HH----HHHHHHHhcCCCeEEEEEe
Confidence 567776663 44456666677777789999999985 222 12 2333333322 11222222
Q ss_pred cCCCCCCcH-HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH--
Q psy2378 141 IGIDDINSY-DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK-- 217 (956)
Q Consensus 141 ~g~~~~~~~-~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~-- 217 (956)
.+.+.. + +....+++. .+.|++ +..++ +.++++++..+ .| +..+||.-..
T Consensus 118 ts~~~~--l~~~v~~~a~~-~e~G~d-vV~~~---------------------~~~~~ir~~~~-~~-~v~pGI~~~~~~ 170 (213)
T 1vqt_A 118 TSMEGS--LEDYMDRIEKL-NKLGCD-FVLPG---------------------PWAKALREKIK-GK-ILVPGIRMEVKA 170 (213)
T ss_dssp TTSCCC--HHHHHHHHHHH-HHHTCE-EECCH---------------------HHHHHHTTTCC-SC-EEECCBC-----
T ss_pred CCCCHH--HHHHHHHHHHH-hcCCCE-EEEcH---------------------HHHHHHHHHCC-CC-EEECCCCCCCCc
Confidence 222222 3 456778888 999998 43311 34667777764 46 7788885321
Q ss_pred -H------HHHHhhh-cCEEEEccccccCCcchHHHH
Q psy2378 218 -E------IDLHLNY-IDGVMLGREAYKNPFLMSNFD 246 (956)
Q Consensus 218 -d------a~~~l~~-ad~VmiGR~~l~~P~l~~~i~ 246 (956)
| ..+ ++. +|++.+||+.+..++-...++
T Consensus 171 ~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~ 206 (213)
T 1vqt_A 171 DDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIK 206 (213)
T ss_dssp ----CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHH
T ss_pred cchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHH
Confidence 1 456 666 999999999988776444333
No 417
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=89.60 E-value=2.3 Score=45.34 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=75.3
Q ss_pred HHHHcCCCEEE----ecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEE--e--ccC--CCCCCcHHHHH
Q psy2378 84 IIQKWGYDEIN----LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK--H--RIG--IDDINSYDFVR 153 (956)
Q Consensus 84 ~~~~~G~d~Ie----iN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vK--i--r~g--~~~~~~~~~~~ 153 (956)
.+.+.|+|+|- ||.|.|.. ....+.+.+++++..+ .++|+.+- + |.| ..++...+...
T Consensus 136 ~AvrlGADaV~~l~~i~~Gs~~e-----------~~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg~v~~~~dp~~Va 203 (307)
T 3fok_A 136 SMVDRGVDFAKTLVRINLSDAGT-----------APTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNGKVVNDLSTDAVI 203 (307)
T ss_dssp HHHHHTCCEEEEEEEECTTCTTH-----------HHHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETTEEEECCSHHHHH
T ss_pred HHHHCCCCEEEEEEEECCCChhH-----------HHHHHHHHHHHHHHHH-cCCcEEEEeeccccCCCCcCCCCCHHHHH
Confidence 45566999966 57776632 1123444555555543 58998775 2 212 12223345567
Q ss_pred HHHHHHHHcCCC----EEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCC--CHHHHH----HHh
Q psy2378 154 DFVGTVSSAGCR----TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK--TKKEID----LHL 223 (956)
Q Consensus 154 ~~a~~l~~~G~~----~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~--s~~da~----~~l 223 (956)
..++...+.|+| +|-+- |. +..+++.+.. .+||+..||=. +.+++. +.+
T Consensus 204 ~aaRiAaELGADs~~tivK~~---------------y~-----e~f~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v~~A~ 262 (307)
T 3fok_A 204 QSVAIAAGLGNDSSYTWMKLP---------------VV-----EEMERVMEST-TMPTLLLGGEGGNDPDATFASWEHAL 262 (307)
T ss_dssp HHHHHHHTCSSCCSSEEEEEE---------------CC-----TTHHHHGGGC-SSCEEEECCSCC--CHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcCCCEEEeC---------------Cc-----HHHHHHHHhC-CCCEEEeCCCCCCCHHHHHHHHHHHH
Confidence 778888999999 77551 11 2246777777 59987777765 445544 445
Q ss_pred h-h-cCEEEEcccccc
Q psy2378 224 N-Y-IDGVMLGREAYK 237 (956)
Q Consensus 224 ~-~-ad~VmiGR~~l~ 237 (956)
+ . +.|+.+||-++.
T Consensus 263 ~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 263 TLPGVRGLTVGRTLLY 278 (307)
T ss_dssp TSTTEEEEEECTTTSS
T ss_pred HhCCCeEEeechhhcc
Confidence 5 4 889999999888
No 418
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=89.55 E-value=3.3 Score=42.99 Aligned_cols=131 Identities=8% Similarity=-0.004 Sum_probs=84.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccC
Q psy2378 63 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 142 (956)
Q Consensus 63 ~~p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g 142 (956)
.-++++|.+.-....+.++.+.++++|||+||+.... + ....+++.+.++.+.+++ .++.++.=...
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~---------~--~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~- 83 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFH---------L--PLNSTDEQIRAFHDKCAA-HKVTGYAVGPI- 83 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTTT---------S--CTTCCHHHHHHHHHHHHH-TTCEEEEEEEE-
T ss_pred ceEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEeccc---------C--CCCCCHHHHHHHHHHHHH-cCCeEEEEecc-
Confidence 4567788776554567788888899999999997541 0 011245666666665554 46665542211
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-ec-----CCCCH
Q psy2378 143 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-NG-----GIKTK 216 (956)
Q Consensus 143 ~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-nG-----gI~s~ 216 (956)
.. ...+.+.+.++.+.+.|+..|.+|... ..|..+.++.+.. ++.+.. |- -+.++
T Consensus 84 ~~--~~~~~~~~~i~~A~~lGa~~v~~~p~~----------------~~l~~l~~~a~~~-gv~l~lEn~~~~~~~~~~~ 144 (257)
T 3lmz_A 84 YM--KSEEEIDRAFDYAKRVGVKLIVGVPNY----------------ELLPYVDKKVKEY-DFHYAIHLHGPDIKTYPDA 144 (257)
T ss_dssp EE--CSHHHHHHHHHHHHHHTCSEEEEEECG----------------GGHHHHHHHHHHH-TCEEEEECCCTTCSSSCSH
T ss_pred cc--CCHHHHHHHHHHHHHhCCCEEEecCCH----------------HHHHHHHHHHHHc-CCEEEEecCCCcccccCCH
Confidence 11 234567788888999999999997431 3677777777654 555432 22 24688
Q ss_pred HHHHHHhhh
Q psy2378 217 KEIDLHLNY 225 (956)
Q Consensus 217 ~da~~~l~~ 225 (956)
+++.++++.
T Consensus 145 ~~~~~ll~~ 153 (257)
T 3lmz_A 145 TDVWVHTKD 153 (257)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 888888864
No 419
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=89.51 E-value=1.4 Score=47.28 Aligned_cols=126 Identities=8% Similarity=0.006 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..+
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t~~ 85 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGT----------TAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT--N---DTEK 85 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---CHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCc--c---cHHH
Confidence 6788889998888999999988752 22223334444456777776665 4677775432 1 2357
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
++++++.++++|+|++-+..-.. .. . ....-.++.+.|.+.+ ++||+ .| |--.+++.+.++.+
T Consensus 86 ai~la~~a~~~Gadavlv~~P~y--~~---~----~~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 86 SIQASIQAKALGADAIMLITPYY--NK---T----NQRGLVKHFEAIADAV-KLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHHH-CSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEecccccCCCCCHHHHHHHhc
Confidence 89999999999999998864321 00 0 0011245667777777 68976 44 55567888777654
No 420
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=89.48 E-value=2.1 Score=44.58 Aligned_cols=143 Identities=13% Similarity=0.203 Sum_probs=80.4
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc--cC--cc--E
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS--VE--ID--I 135 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~--~p--v 135 (956)
+.++++=+- +..|+....+++.+.++|+|.|-+|.-. | .+.+.+.++.+++. .+ .| +
T Consensus 55 ~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~~~~G~~~~~~l 118 (246)
T 2yyu_A 55 GHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAG----------G------RRMMEAAIEGLDAGTPSGRMRPRCI 118 (246)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCSSSCCCEEE
T ss_pred CCeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECCC----------C------HHHHHHHHHHHHhhcccCCcCCCEE
Confidence 344543332 4667877777888889999999999632 1 33455667777652 23 34 2
Q ss_pred EEEeccCCC------C----CCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCc
Q psy2378 136 TVKHRIGID------D----INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPEL 205 (956)
Q Consensus 136 ~vKir~g~~------~----~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~i 205 (956)
.|......+ + ....+....+++...+.|.+.+... .++ ++++++..+..
T Consensus 119 av~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~--------------------~~e-i~~lr~~~~~~ 177 (246)
T 2yyu_A 119 AVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS--------------------ANE-AAFIKERCGAS 177 (246)
T ss_dssp EESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECC--------------------HHH-HHHHHHHHCTT
T ss_pred EEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeC--------------------HHH-HHHHHHhcCCC
Confidence 232222210 0 0001112222222345565554221 134 66777665435
Q ss_pred eEEEecCCCCH-H---------HHHHHhhh-cCEEEEccccccCCcch
Q psy2378 206 EIIINGGIKTK-K---------EIDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 206 pVi~nGgI~s~-~---------da~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
+++..|||... . .+.++++. +|.+.+||+.+..++..
T Consensus 178 ~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~ 225 (246)
T 2yyu_A 178 FLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPL 225 (246)
T ss_dssp SEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHH
T ss_pred CEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHH
Confidence 68999999732 0 36666666 99999999999866643
No 421
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.42 E-value=1.7 Score=46.57 Aligned_cols=127 Identities=11% Similarity=-0.002 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 83 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGT----------TGESATLNHDEHADVVMMTLDLADGRIPVIAGTGA--N---ATA 83 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--c---cHH
Confidence 47888999999888899999998753 23333334555567777777665 3677765432 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. .. . ....-.++.++|.+.+ ++|||. | |--.+++...++.+
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~y--~~---~----s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 84 EAISLTQRFNDSGIVGCLTVTPYY--NR---P----SQEGLYQHFKAIAEHT-DLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp HHHHHHHHTTTSSCSEEEEECCCS--SC---C----CHHHHHHHHHHHHTTC-SSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC--CC---C----CHHHHHHHHHHHHHhc-CCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 689999999999999998864321 00 0 0011245667788777 699864 4 43457888877753
No 422
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=89.39 E-value=1.5 Score=46.83 Aligned_cols=106 Identities=12% Similarity=0.222 Sum_probs=65.4
Q ss_pred eeCcccccccCChHHH-----HHHHHHHhhccC--ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccc
Q psy2378 105 QNGFFGAILMTKPLLV-----SDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLK 177 (956)
Q Consensus 105 ~~~~~G~~l~~~~~~~-----~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~ 177 (956)
|-+=+++-|.+|.+.. .+-++.+|+..+ .++.|-. + +. .+ ++.+.++|+|+|-++.-+
T Consensus 162 R~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev----~---t~---ee-a~eA~~aGaD~I~ld~~~---- 226 (286)
T 1x1o_A 162 RYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEV----R---SL---EE-LEEALEAGADLILLDNFP---- 226 (286)
T ss_dssp CSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEE----S---SH---HH-HHHHHHHTCSEEEEESCC----
T ss_pred ccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEe----C---CH---HH-HHHHHHcCCCEEEECCCC----
Confidence 3333445566655443 345666776654 3344411 1 12 23 345567899999887643
Q ss_pred cCCCCCCCCCCcCcHHHHHHHHHhC-CCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCc
Q psy2378 178 KLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 240 (956)
Q Consensus 178 g~~~~~~~~~~~~~~~~i~~v~~~~-~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~ 240 (956)
.+.++++.+.+ +++|+.+.||| +++.+.++.+. +|+|.+|.....-|+
T Consensus 227 --------------~~~~k~av~~v~~~ipi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~~ 276 (286)
T 1x1o_A 227 --------------LEALREAVRRVGGRVPLEASGNM-TLERAKAAAEAGVDYVSVGALTHSAKA 276 (286)
T ss_dssp --------------HHHHHHHHHHHTTSSCEEEESSC-CHHHHHHHHHHTCSEEECTHHHHSCCC
T ss_pred --------------HHHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCCc
Confidence 12233333332 25899999999 59999999988 999999886555454
No 423
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=89.35 E-value=2.8 Score=44.38 Aligned_cols=138 Identities=14% Similarity=0.082 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHcCCCEEE-ec----------CCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCC
Q psy2378 75 PKKLAKSAKIIQKWGYDEIN-LN----------CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 143 (956)
Q Consensus 75 ~~~~~~aA~~~~~~G~d~Ie-iN----------~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~ 143 (956)
.+.+....+.+++.|...+- +. . +|.- .-|+..+++..++.++-+ ++.||.+|.....
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~-----kIgs~~~~n~~ll~~~a~-----~~kPV~lk~G~~~ 156 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADML-----QIGARNMQNFPLLREVGR-----SGKPVLLKRGFGN 156 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEE-----EECGGGTTCHHHHHHHHH-----HTCCEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeE-----EECcccccCHHHHHHHHc-----cCCeEEEcCCCCC
Confidence 67777777777778865432 21 1 3332 247888899988777652 5899999976632
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEE-EcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-ec---CCCC--H
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFI-VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-NG---GIKT--K 216 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~-vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-nG---gI~s--~ 216 (956)
++++....+..+...|..-++ +|-.+. . .+++.....|+..+..+++.+ ++||++ +. |..+ .
T Consensus 157 ----t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~---~---yp~y~~~~vdl~~i~~lk~~~-~lpVi~dssH~~g~~~~~~ 225 (276)
T 1vs1_A 157 ----TVEELLAAAEYILLEGNWQVVLVERGIR---T---FEPSTRFTLDVAAVAVLKEAT-HLPVIVDPSHPAGRRSLVP 225 (276)
T ss_dssp ----CHHHHHHHHHHHHHTTCCCEEEEECCBC---C---SCCSSSSBCBHHHHHHHHHHB-SSCEEECCHHHHCSGGGHH
T ss_pred ----CHHHHHHHHHHHHHcCCCeEEEEeCCcC---C---CCCcCcchhCHHHHHHHHHHh-CCCEEEeCCCCCCccchHH
Confidence 234567778888899985554 451221 1 122233347899999999976 789875 22 3222 3
Q ss_pred HHHHHHhhh-cCEEEEccc
Q psy2378 217 KEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 217 ~da~~~l~~-ad~VmiGR~ 234 (956)
+-+...++. |||+||=+=
T Consensus 226 ~~~~aAva~Ga~Gl~IE~H 244 (276)
T 1vs1_A 226 ALAKAGLAAGADGLIVEVH 244 (276)
T ss_dssp HHHHHHHHTTCSEEEEEBC
T ss_pred HHHHHHHHcCCCEEEEEec
Confidence 444445555 999998654
No 424
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=89.26 E-value=2.3 Score=44.01 Aligned_cols=142 Identities=13% Similarity=0.212 Sum_probs=81.9
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc--cCc--c--E
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS--VEI--D--I 135 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~--~~~--p--v 135 (956)
+.++++=+- +..|+....+++.+.++|+|.|-+|.-. | .+.+...++.+++. .+. | +
T Consensus 54 ~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~----------g------~~~l~~~~~~~~~~~~~g~~~~~~~ 117 (239)
T 1dbt_A 54 NCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAG----------G------KKMMQAALEGLEEGTPAGKKRPSLI 117 (239)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CCcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcC----------C------HHHHHHHHHHHHhhhccCCCCccEE
Confidence 344553332 4667777777778889999999998621 1 22345566666654 133 4 4
Q ss_pred EEEeccCCC--C------C--CcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCc
Q psy2378 136 TVKHRIGID--D------I--NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPEL 205 (956)
Q Consensus 136 ~vKir~g~~--~------~--~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~i 205 (956)
.|-...+.+ . - ...+....+++...+.|.+.+.... +.++++++..++.
T Consensus 118 ~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~---------------------~~i~~lr~~~~~~ 176 (239)
T 1dbt_A 118 AVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV---------------------HEAKAIYQAVSPS 176 (239)
T ss_dssp EECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG---------------------GGHHHHTTTSCTT
T ss_pred EEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH---------------------HHHHHHHHhcCCC
Confidence 443333221 0 0 1011122222223556666543332 2355666665446
Q ss_pred eEEEecCCCCHHHH-----------HHHhhh-cCEEEEccccccCCcch
Q psy2378 206 EIIINGGIKTKKEI-----------DLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 206 pVi~nGgI~s~~da-----------~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
+++..|||.. +.+ .++++. +|.+.+||+.+..|+..
T Consensus 177 ~i~v~gGI~~-~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~ 224 (239)
T 1dbt_A 177 FLTVTPGIRM-SEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPV 224 (239)
T ss_dssp CEEEECCBCC-TTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHH
T ss_pred cEEEeCCcCC-CCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHH
Confidence 8999999974 333 566666 99999999999876643
No 425
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=89.17 E-value=1 Score=50.42 Aligned_cols=67 Identities=13% Similarity=0.297 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
.+.++.+.++|+|.|.+.... |. +...++.++++++.+ ++||++ |++.|+++++.+.+. ||+|.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~----G~--------~~~~~e~I~~ik~~~-~i~Vi~-g~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH----GH--------SLNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC----CS--------BHHHHHHHHHHHTTC-CCEEEE-EEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCC----CC--------cccHHHHHHHHHhcC-CCeEEE-eecCCHHHHHHHHHcCCCEEEE
Confidence 467889999999999884321 10 012357888999887 799986 678999999999988 999999
Q ss_pred cc
Q psy2378 232 GR 233 (956)
Q Consensus 232 GR 233 (956)
|-
T Consensus 212 G~ 213 (400)
T 3ffs_A 212 GI 213 (400)
T ss_dssp CC
T ss_pred eC
Confidence 63
No 426
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=89.16 E-value=0.88 Score=45.88 Aligned_cols=81 Identities=11% Similarity=0.015 Sum_probs=59.5
Q ss_pred ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC
Q psy2378 133 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 212 (956)
Q Consensus 133 ~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg 212 (956)
.|+.+=+|.. +.+++.++++.+.+.|++.|.+|.++. ...+.++++++.+|.-.+++.|-
T Consensus 10 ~~~i~~~~~~-----~~~~~~~~~~~~~~~G~~~iev~~~~~---------------~~~~~i~~ir~~~~~~~~ig~~~ 69 (205)
T 1wa3_A 10 HKIVAVLRAN-----SVEEAKEKALAVFEGGVHLIEITFTVP---------------DADTVIKELSFLKEKGAIIGAGT 69 (205)
T ss_dssp HCEEEEECCS-----SHHHHHHHHHHHHHTTCCEEEEETTST---------------THHHHHHHTHHHHHTTCEEEEES
T ss_pred CCEEEEEecC-----CHHHHHHHHHHHHHCCCCEEEEeCCCh---------------hHHHHHHHHHHHCCCCcEEEecc
Confidence 4666666642 234688999999999999999997751 22456788887653123567788
Q ss_pred CCCHHHHHHHhhh-cCEEEEccc
Q psy2378 213 IKTKKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 213 I~s~~da~~~l~~-ad~VmiGR~ 234 (956)
+.++++++++.+. +|+| ++-+
T Consensus 70 v~~~~~~~~a~~~Gad~i-v~~~ 91 (205)
T 1wa3_A 70 VTSVEQCRKAVESGAEFI-VSPH 91 (205)
T ss_dssp CCSHHHHHHHHHHTCSEE-ECSS
T ss_pred cCCHHHHHHHHHcCCCEE-EcCC
Confidence 8999999999888 9999 6654
No 427
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=89.13 E-value=1.3 Score=52.17 Aligned_cols=119 Identities=11% Similarity=0.056 Sum_probs=76.5
Q ss_pred cCCCcEEEecccccccccCCchhccccCCCCCCEEEEecCC------CHHHHHHHHHHHHHcCCCEEEecCCCCcceeee
Q psy2378 33 ITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDN------EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQN 106 (956)
Q Consensus 33 ~g~~~l~~tem~~~~~l~~~~~~~~~~~~~~~p~~vQl~g~------~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~ 106 (956)
-+|+|++.-|-+++-.-..-....+.-.-.+.|+.+|+.-. +-+.+.+++..+...|+++|=+||++.
T Consensus 137 ~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~avG~NC~~g------ 210 (566)
T 1q7z_A 137 EEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALGINCSLG------ 210 (566)
T ss_dssp HTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEEEEESSSC------
T ss_pred hCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEEEEeCCCC------
Confidence 36699999996644322110001111111268888888521 123355555566678999999999753
Q ss_pred CcccccccCChHHHHHHHHHHhhccCccEEEEeccCCC---C-----CCcHHHHHHHHHHHHHcCCCEE
Q psy2378 107 GFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID---D-----INSYDFVRDFVGTVSSAGCRTF 167 (956)
Q Consensus 107 ~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~---~-----~~~~~~~~~~a~~l~~~G~~~i 167 (956)
|+.+..+++.+++..+.|+++.=-.|.. + ..+.+++.+.++.+.+.|+..|
T Consensus 211 ----------p~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G~~ii 269 (566)
T 1q7z_A 211 ----------PEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGVNIF 269 (566)
T ss_dssp ----------HHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTTCSEE
T ss_pred ----------HHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcCCcEE
Confidence 7889999999998889999988544433 1 1123456677788888897766
No 428
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=89.06 E-value=0.95 Score=48.20 Aligned_cols=110 Identities=15% Similarity=0.246 Sum_probs=67.5
Q ss_pred eeCcccccccCChHHH-----HHHHHHHhhccC--ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccc
Q psy2378 105 QNGFFGAILMTKPLLV-----SDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLK 177 (956)
Q Consensus 105 ~~~~~G~~l~~~~~~~-----~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~ 177 (956)
|-+=+-+-|.++.+.. .+.++++|+..+ .++.|=.+ +. +-++.+.++|+|.|-++.-+
T Consensus 159 R~gL~d~vlikdnHi~~~G~i~~av~~ar~~~~~~~~I~VEV~-------tl----eea~eA~~aGaD~I~LDn~~---- 223 (285)
T 1o4u_A 159 RLDLSGCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVE-------NL----EDALRAVEAGADIVMLDNLS---- 223 (285)
T ss_dssp ------CEEECHHHHHHHSSHHHHHHHHHTTSCTTSCEEEEES-------SH----HHHHHHHHTTCSEEEEESCC----
T ss_pred cCCCcccEEEchhHHhhcCCHHHHHHHHHHhCCCCceEEEEeC-------CH----HHHHHHHHcCCCEEEECCCC----
Confidence 3333344566665443 446666666653 34444221 12 23455677999999998643
Q ss_pred cCCCCCCCCCCcCcH-HHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcc
Q psy2378 178 KLNPKQNRKIPILKY-NFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 178 g~~~~~~~~~~~~~~-~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l 241 (956)
+..+ +.++.++...+++|+.++||| +++.+.++.+. +|++.+|.....-|++
T Consensus 224 -----------~e~l~~av~~l~~~~~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 224 -----------PEEVKDISRRIKDINPNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp -----------HHHHHHHHHHHHHHCTTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCCCC
T ss_pred -----------HHHHHHHHHHhhccCCCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCc
Confidence 1233 334445443457899999999 58889888887 9999999987766653
No 429
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=89.01 E-value=2 Score=44.02 Aligned_cols=142 Identities=8% Similarity=0.137 Sum_probs=86.7
Q ss_pred CC-CEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEec
Q psy2378 63 EH-PIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 140 (956)
Q Consensus 63 ~~-p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir 140 (956)
+. ++++=+= +.-|.-...+++.+.+. |.|-+|. +||. ++.+...++...+ .+.-|++=.+
T Consensus 52 ~~~~VflDlK~~DI~nTv~~~~~~~~~~--d~vTVh~-----------~~G~----~~~~~~a~~~~~~-~~~~v~vLts 113 (222)
T 4dbe_A 52 DVEEIIVDFKLADIGYIMKSIVERLSFA--NSFIAHS-----------FIGV----KGSLDELKRYLDA-NSKNLYLVAV 113 (222)
T ss_dssp CCSEEEEEEEECSCHHHHHHHHTTCTTC--SEEEEES-----------TTCT----TTTHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCCeEEEEeeecchHHHHHHHHHHHHhC--CEEEEEc-----------CcCc----HHHHHHHHHHHHh-cCCcEEEEEe
Confidence 45 6776664 44455555566555454 8888875 3320 1123344444432 2345666555
Q ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHH--H
Q psy2378 141 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK--E 218 (956)
Q Consensus 141 ~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~--d 218 (956)
.+..+.... ....+++..+++|++.+.+++.. -+.+..+++..++ .++.++||.- + +
T Consensus 114 ~s~~~~~~~-~~~~~a~~a~~~g~~GvV~sat~------------------p~e~~~ir~~~~~-~~~vtPGI~~-~g~t 172 (222)
T 4dbe_A 114 MSHEGWSTL-FADYIKNVIREISPKGIVVGGTK------------------LDHITQYRRDFEK-MTIVSPGMGS-QGGS 172 (222)
T ss_dssp CSSTTCCCT-THHHHHHHHHHHCCSEEEECTTC------------------HHHHHHHHHHCTT-CEEEECCBST-TSBC
T ss_pred CCCcchHHH-HHHHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHhCCC-CEEEcCCccc-CccC
Confidence 544332111 13678999999999999776532 2446777887766 6778888863 3 3
Q ss_pred HHHHhhh-cCEEEEccccccCCcchH
Q psy2378 219 IDLHLNY-IDGVMLGREAYKNPFLMS 243 (956)
Q Consensus 219 a~~~l~~-ad~VmiGR~~l~~P~l~~ 243 (956)
..++++. +|.+.+||+...-++-..
T Consensus 173 p~~a~~~Gad~iVVGR~I~~A~dP~~ 198 (222)
T 4dbe_A 173 YGDAVCAGADYEIIGRSIYNAGNPLT 198 (222)
T ss_dssp TTHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHcCCCEEEECHHhcCCCCHHH
Confidence 4555566 999999999988665443
No 430
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.01 E-value=2.7 Score=46.64 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=71.6
Q ss_pred CChHHHHHHHHHHhhccCccEEEEeccCCCCC---CcH--------------------------HHHHHHHHHHHHcCCC
Q psy2378 115 TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI---NSY--------------------------DFVRDFVGTVSSAGCR 165 (956)
Q Consensus 115 ~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~---~~~--------------------------~~~~~~a~~l~~~G~~ 165 (956)
..++.+.+.++.+++.++.|+.|.+-...+.. ... ....+.++.+.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 46888889999999888888887764322210 000 0124567778889999
Q ss_pred EEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE-ccc
Q psy2378 166 TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GRE 234 (956)
Q Consensus 166 ~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi-GR~ 234 (956)
.|++|... ..++.++++++. ++||+. .+.+++++..+.+. +|+|.+ |+.
T Consensus 125 ~V~~~~g~----------------~~~~~i~~~~~~--g~~v~~--~v~t~~~a~~a~~~GaD~i~v~g~~ 175 (369)
T 3bw2_A 125 VVSFHFGV----------------PDREVIARLRRA--GTLTLV--TATTPEEARAVEAAGADAVIAQGVE 175 (369)
T ss_dssp EEEEESSC----------------CCHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHTTCSEEEEECTT
T ss_pred EEEEeCCC----------------CcHHHHHHHHHC--CCeEEE--ECCCHHHHHHHHHcCCCEEEEeCCC
Confidence 99998754 246788888874 688876 47899999888777 999988 653
No 431
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=88.94 E-value=2.7 Score=44.82 Aligned_cols=124 Identities=13% Similarity=0.036 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.++- |.+-+ |.. +..++
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gv--g~~---~t~~a 79 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGT----------TGLGPALSLQEKMELTDAATSAARR-VIVQV--ASL---NADEA 79 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHHHHCSS-EEEEC--CCS---SHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCC-EEEee--CCC---CHHHH
Confidence 37788999999888999999988753 2333333555557888888877754 54433 322 23578
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e-----cCCCCHHHHHH
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDL 221 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n-----GgI~s~~da~~ 221 (956)
+++++.++++|+|++-+..-.. .. ......-.++.++|.+++ ++|||. | |--.+++.+.+
T Consensus 80 i~la~~A~~~Gadavlv~~P~y--~~------~~s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 80 IALAKYAESRGAEAVASLPPYY--FP------RLSERQIAKYFRDLCSAV-SIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHHHHHTTCSEEEECCSCS--ST------TCCHHHHHHHHHHHHHHC-SSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcC--CC------CCCHHHHHHHHHHHHHhc-CCCEEEEeChhhcCCCCCHHHHHh
Confidence 9999999999999998864321 00 000111245667888887 699864 4 43347777766
No 432
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=88.93 E-value=4.9 Score=43.89 Aligned_cols=187 Identities=11% Similarity=0.060 Sum_probs=113.3
Q ss_pred ceEEccCcC--cCCH--HHHH--HHHHcCCCcEEEeccccccccc-CCchhccccCCCCCCEEEEe------cCCCHHHH
Q psy2378 12 KISIAPMMN--LTDR--HCRM--FHRQITRYSWLYTEMFTTQAIL-GNKKHCLDFNAEEHPIAFQV------GDNEPKKL 78 (956)
Q Consensus 12 ~i~lAPM~~--~td~--~fR~--~~~~~g~~~l~~tem~~~~~l~-~~~~~~~~~~~~~~p~~vQl------~g~~~~~~ 78 (956)
.+++|.+.. ..+. .++. .+++.| +|.+=-.....+.++ .... .+.... + .-|+ .+-..+.+
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aG-adavKfq~~k~~tl~s~~~~---~fq~~~-~-~~~~y~~~~~~~l~~e~~ 93 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAG-AEVVKHQTHIVEDEMSDEAK---QVIPGN-A-DVSIYEIMERCALNEEDE 93 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHT-CSEEEEEECCHHHHCCGGGG---GCCCTT-C-SSCHHHHHHHHCCCHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhC-CCEEeeeecccccccCcchh---ccccCC-C-CccHHHHHHHhCCCHHHH
Confidence 678898865 4444 3333 346677 577655544444443 1110 011000 1 0111 24456777
Q ss_pred HHHHHHHHHcCCCEEEe-----------cCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCC
Q psy2378 79 AKSAKIIQKWGYDEINL-----------NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDIN 147 (956)
Q Consensus 79 ~~aA~~~~~~G~d~Iei-----------N~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~ 147 (956)
....+.+++.|.+.+-= ..++|.-++ ||.-++|..++.++-+ .+.||.+|....
T Consensus 94 ~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI-----~S~~~~n~~LL~~va~-----~gkPviLstGma----- 158 (349)
T 2wqp_A 94 IKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKI-----GSGECNNYPLIKLVAS-----FGKPIILSTGMN----- 158 (349)
T ss_dssp HHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEE-----CGGGTTCHHHHHHHHT-----TCSCEEEECTTC-----
T ss_pred HHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEE-----CcccccCHHHHHHHHh-----cCCeEEEECCCC-----
Confidence 77777777777554421 234565543 5666888888666533 599999887663
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-c
Q psy2378 148 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-I 226 (956)
Q Consensus 148 ~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-a 226 (956)
++++....++.+.+.|.+.+-+|+-+ .| +. .....|+..+..+++.+|++||..++--....-+..+++. |
T Consensus 159 t~~Ei~~Ave~i~~~G~~iiLlhc~s----~Y---p~-~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlGA 230 (349)
T 2wqp_A 159 SIESIKKSVEIIREAGVPYALLHCTN----IY---PT-PYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGG 230 (349)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCC----CS---SC-CGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC----CC---CC-ChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhCC
Confidence 45677788888999999877778533 11 11 1224789999999998867999776655445555666655 8
Q ss_pred C
Q psy2378 227 D 227 (956)
Q Consensus 227 d 227 (956)
|
T Consensus 231 ~ 231 (349)
T 2wqp_A 231 S 231 (349)
T ss_dssp C
T ss_pred C
Confidence 8
No 433
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=88.85 E-value=1.8 Score=45.48 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccc---cCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL---MTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l---~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~ 150 (956)
+++...+-|+.+.+.|+|.|||..-+--| |+.. ....+++.-+++++++ .++|+||-.+-
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTRP-------ga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~--------- 90 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTRP-------GHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFR--------- 90 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCST-------TCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSC---------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCC-------CCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCC---------
Confidence 56667777777788899999997533222 2222 2345677888888875 58898887543
Q ss_pred HHHHHHHHHHHcCCCEEE-Eccc
Q psy2378 151 FVRDFVGTVSSAGCRTFI-VHAR 172 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~-vh~r 172 (956)
-++++...++|++.|+ |++.
T Consensus 91 --~~Va~~al~aGa~iINDVs~g 111 (270)
T 4hb7_A 91 --SEVAEACLKLGVDMINDQWAG 111 (270)
T ss_dssp --HHHHHHHHHHTCCEEEETTTT
T ss_pred --HHHHHHHHHhccceecccccc
Confidence 3678888899999997 5544
No 434
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=88.85 E-value=1.5 Score=46.89 Aligned_cols=124 Identities=15% Similarity=0.023 Sum_probs=81.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~--~---~t~ 83 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGT----------TGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS--N---NTA 83 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc--c---cHH
Confidence 57888999999888999999988742 23333334555567777777665 3677765432 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcC---cHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHH
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL---KYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDL 221 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~---~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~ 221 (956)
+++++++.++++|+|++-+..-. |.++- -.++.++|.+.+ ++||+ .| |--.+++.+.+
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~------------y~~~s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~ 150 (291)
T 3a5f_A 84 ASIAMSKWAESIGVDGLLVITPY------------YNKTTQKGLVKHFKAVSDAV-STPIIIYNVPGRTGLNITPGTLKE 150 (291)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC------------SSCCCHHHHHHHC-CTGGGC-CSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCC------------CCCCCHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHH
Confidence 78999999999999999886432 11111 123445566666 68875 34 44457887777
Q ss_pred Hhh
Q psy2378 222 HLN 224 (956)
Q Consensus 222 ~l~ 224 (956)
+.+
T Consensus 151 La~ 153 (291)
T 3a5f_A 151 LCE 153 (291)
T ss_dssp HTT
T ss_pred HHc
Confidence 753
No 435
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=88.74 E-value=0.62 Score=48.35 Aligned_cols=154 Identities=12% Similarity=0.121 Sum_probs=99.7
Q ss_pred CCEEEEec----------CCCHHHHHHHHHHHHHcCCCEEEecCC-----------------------------------
Q psy2378 64 HPIAFQVG----------DNEPKKLAKSAKIIQKWGYDEINLNCG----------------------------------- 98 (956)
Q Consensus 64 ~p~~vQl~----------g~~~~~~~~aA~~~~~~G~d~IeiN~g----------------------------------- 98 (956)
..++|.|- ++.| +.+++|..++++|+|+|=+|.-
T Consensus 32 ~~LgVNIDhVAtLRnARg~~~P-Dpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~i~t~lNlEma~t~emi~i 110 (278)
T 3gk0_A 32 IDLGVNIDHVATLRNARGTAYP-DPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLDI 110 (278)
T ss_dssp SEEEEECHHHHHHHHHHSSSCS-CHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEECSSHHHHHH
T ss_pred cEEEechHhhhhhhccCCCCCC-CHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHHcCCCEEeecCCCHHHHHH
Confidence 45777772 3444 4678888899999999999532
Q ss_pred ---------CCccee---eeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCE
Q psy2378 99 ---------CPSNRV---QNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRT 166 (956)
Q Consensus 99 ---------CP~~~~---~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~ 166 (956)
|=+|.. .+...|=.+..+.+++.++++.+++. ++.||+-|-+. .+-++...+.|++.
T Consensus 111 al~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~-GIrVSLFIDpd----------~~qI~aA~~~GAd~ 179 (278)
T 3gk0_A 111 ACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADA-GVRVSLFIDPD----------EAQIRAAHETGAPV 179 (278)
T ss_dssp HHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHT-TCEEEEEECSC----------HHHHHHHHHHTCSE
T ss_pred HHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHC-CCEEEEEeCCC----------HHHHHHHHHhCcCE
Confidence 323322 24455667888999999999999975 99999887541 23466788899999
Q ss_pred EEEcccccccccCCCCCCCCCCc---CcHHH---HHHHHHhCCCceEEEecCCCCHHHHHHH--hhhcCEEEEccccccC
Q psy2378 167 FIVHARNAFLKKLNPKQNRKIPI---LKYNF---VYNLKKDFPELEIIINGGIKTKKEIDLH--LNYIDGVMLGREAYKN 238 (956)
Q Consensus 167 i~vh~r~~~~~g~~~~~~~~~~~---~~~~~---i~~v~~~~~~ipVi~nGgI~s~~da~~~--l~~ad~VmiGR~~l~~ 238 (956)
|.+|.+.. .. .+... .-++. .++..... ++-|=+.-|++ .+.+..+ +....-|-||.+++++
T Consensus 180 IELhTG~Y--A~------a~~~~~~~~el~rl~~aA~~A~~l-GL~VnAGHGL~-y~Nv~~ia~ip~i~ElnIGHaiIa~ 249 (278)
T 3gk0_A 180 IELHTGRY--AD------AHDAAEQQREFERIATGVDAGIAL-GLKVNAGHGLH-YTNVQAIAALPGIAELNIGHAIVAH 249 (278)
T ss_dssp EEECCHHH--HT------CSSHHHHHHHHHHHHHHHHHHHHT-TCEEEECTTCC-TTTHHHHHTCTTEEEEEECHHHHHH
T ss_pred EEEecchh--hc------cCCchhHHHHHHHHHHHHHHHHHc-CCEEecCCCCC-HHHHHHHHhCCCCeEEecCHHHHHH
Confidence 99997652 11 00000 11111 22223334 67787777774 5555433 3338889999988765
Q ss_pred C
Q psy2378 239 P 239 (956)
Q Consensus 239 P 239 (956)
-
T Consensus 250 A 250 (278)
T 3gk0_A 250 A 250 (278)
T ss_dssp H
T ss_pred H
Confidence 3
No 436
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=88.68 E-value=5 Score=43.17 Aligned_cols=139 Identities=8% Similarity=-0.127 Sum_probs=76.0
Q ss_pred HHHHHHcCCCEEEecCCCCcc-------eeeeCc------ccccccCC-hHHHHHHHHHHhhcc--CccEEEEeccCCCC
Q psy2378 82 AKIIQKWGYDEINLNCGCPSN-------RVQNGF------FGAILMTK-PLLVSDCIKAMRDSV--EIDITVKHRIGIDD 145 (956)
Q Consensus 82 A~~~~~~G~d~IeiN~gCP~~-------~~~~~~------~G~~l~~~-~~~~~eiv~~v~~~~--~~pv~vKir~g~~~ 145 (956)
.+.+.+.|+..|++-+-++.+ ...... +| +-+. .+...+-++..++.. +.|+.+-+..
T Consensus 29 ~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g--~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g---- 102 (311)
T 1jub_A 29 LEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMG--LPNLGFDYYLDYVLKNQKENAQEGPIFFSIAG---- 102 (311)
T ss_dssp HHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCC--CCBSCHHHHHHHHHHHHHHTCSSSCCEEEECC----
T ss_pred HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCC--CCCccHHHHHHHHHHHHHhcCCCCCEEEEcCC----
Confidence 345577899999875544332 111110 11 1111 233334444444344 7888777652
Q ss_pred CCcHHHHHHHHHHHHHcCCC-EEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE--ecCCCCHHHHH--
Q psy2378 146 INSYDFVRDFVGTVSSAGCR-TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII--NGGIKTKKEID-- 220 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~-~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~--nGgI~s~~da~-- 220 (956)
...++..+.++.++++|+| +|.+|..+....|. ..-...+..-++.++.+++.+ ++||+. +.++ +.+++.
T Consensus 103 -~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~--~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~-~~~~~~~~ 177 (311)
T 1jub_A 103 -MSAAENIAMLKKIQESDFSGITELNLSCPNVPGE--PQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPYF-DLVHFDIM 177 (311)
T ss_dssp -SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSC--CCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCC-SHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCc--ccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCC-CHHHHHHH
Confidence 2345688999999999999 99998643211110 000001111246677777776 789874 5555 555543
Q ss_pred --HHhhh-cCEEEE
Q psy2378 221 --LHLNY-IDGVML 231 (956)
Q Consensus 221 --~~l~~-ad~Vmi 231 (956)
.+.+. +|+|.+
T Consensus 178 a~~~~~~G~d~i~v 191 (311)
T 1jub_A 178 AEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHTTSCCCEEEE
T ss_pred HHHHHHcCCcEEEe
Confidence 33333 999865
No 437
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=88.64 E-value=3.9 Score=41.89 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=78.8
Q ss_pred HHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhC
Q psy2378 123 CIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 202 (956)
Q Consensus 123 iv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~ 202 (956)
+++.+++ .|+..=+|.. + .+++.++++.+.+.|++.|.+.-++ +...+.++++++.+
T Consensus 10 ~~~~l~~---~~ii~vir~~-~----~~~~~~~~~al~~gGv~~iel~~k~---------------~~~~~~i~~l~~~~ 66 (224)
T 1vhc_A 10 IIEKLRE---LKIVPVIALD-N----ADDILPLADTLAKNGLSVAEITFRS---------------EAAADAIRLLRANR 66 (224)
T ss_dssp HHHHHHH---HCEEEEECCS-S----GGGHHHHHHHHHHTTCCEEEEETTS---------------TTHHHHHHHHHHHC
T ss_pred HHHHHHH---CCeEEEEeCC-C----HHHHHHHHHHHHHcCCCEEEEeccC---------------chHHHHHHHHHHhC
Confidence 4444443 3555557762 1 2347899999999999999997554 13457888899888
Q ss_pred CCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcchHHHHHhhccCCCCCCCCCHHHHHHH
Q psy2378 203 PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINL 267 (956)
Q Consensus 203 ~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~~~~~~~~~~~~~~e~~~~ 267 (956)
|++ +++.|-+.+.++++.+++. ||+|..+- .|+.+.+..++ ++.+..+...+..|..+.
T Consensus 67 ~~l-~vgaGtvl~~d~~~~A~~aGAd~v~~p~---~d~~v~~~ar~--~g~~~i~Gv~t~~e~~~A 126 (224)
T 1vhc_A 67 PDF-LIAAGTVLTAEQVVLAKSSGADFVVTPG---LNPKIVKLCQD--LNFPITPGVNNPMAIEIA 126 (224)
T ss_dssp TTC-EEEEESCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHH--TTCCEECEECSHHHHHHH
T ss_pred cCc-EEeeCcEeeHHHHHHHHHCCCCEEEECC---CCHHHHHHHHH--hCCCEEeccCCHHHHHHH
Confidence 653 4667778899999999998 99998883 67776666655 333221223566666544
No 438
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=88.64 E-value=2.5 Score=46.33 Aligned_cols=119 Identities=15% Similarity=0.151 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHH
Q psy2378 80 KSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTV 159 (956)
Q Consensus 80 ~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l 159 (956)
..+..+.+. +|.+-| |+..+++..++.++- ..+.||.+|... ..++++....+..+
T Consensus 181 ~~~~~l~~~-vd~lkI--------------gAr~~~n~~LL~~va-----~~~kPVilk~G~----~~tl~ei~~Ave~i 236 (350)
T 1vr6_A 181 DDLPKVAEY-ADIIQI--------------GARNAQNFRLLSKAG-----SYNKPVLLKRGF----MNTIEEFLLSAEYI 236 (350)
T ss_dssp GGHHHHHHH-CSEEEE--------------CGGGTTCHHHHHHHH-----TTCSCEEEECCT----TCCHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEE--------------CcccccCHHHHHHHH-----ccCCcEEEcCCC----CCCHHHHHHHHHHH
Q ss_pred HHcCCCEEEEc---ccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-ecCCCC-----HHHHHHHhhh-cCEE
Q psy2378 160 SSAGCRTFIVH---ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-NGGIKT-----KKEIDLHLNY-IDGV 229 (956)
Q Consensus 160 ~~~G~~~i~vh---~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-nGgI~s-----~~da~~~l~~-ad~V 229 (956)
...|..-+++- .++ .+++.....|+..+..+++.+ ++||++ +.--.. ..-+...++. |||+
T Consensus 237 ~~~GN~~viLceRG~~t--------yp~~~~~~vdl~ai~~lk~~~-~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl 307 (350)
T 1vr6_A 237 ANSGNTKIILCERGIRT--------FEKATRNTLDISAVPIIRKES-HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGI 307 (350)
T ss_dssp HHTTCCCEEEEECCBCC--------SCCSSSSBCCTTHHHHHHHHB-SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEE
T ss_pred HHCCCCeEEEEeCCCCC--------CCCcChhhhhHHHHHHHHHhh-CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEE
Q ss_pred EE
Q psy2378 230 ML 231 (956)
Q Consensus 230 mi 231 (956)
||
T Consensus 308 ~I 309 (350)
T 1vr6_A 308 IV 309 (350)
T ss_dssp EE
T ss_pred EE
No 439
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=88.58 E-value=0.89 Score=45.63 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=48.0
Q ss_pred ccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCCEEeeCchhhchHHHHHHH
Q psy2378 897 KDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 897 ~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~~~~lT~~G~~~~~~i~~~ 952 (956)
...+....+.+..|.........++.|.++||+..+.+.+.||++|+.++..+...
T Consensus 28 ~~~V~~~~LA~~LgvS~~SV~~~lkkL~e~GLV~~~~~Gv~LTe~G~~~A~~i~~r 83 (200)
T 2p8t_A 28 KEPLGRKQISERLELGEGSVRTLLRKLSHLDIIRSKQRGHFLTLKGKEIRDKLLSM 83 (200)
T ss_dssp TSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC--CEEECHHHHHHHHHHHTT
T ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeCCCeEECHHHHHHHHHHHHH
Confidence 46788999999999988888889999999999999888999999999999887653
No 440
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=88.56 E-value=6.8 Score=40.97 Aligned_cols=143 Identities=12% Similarity=0.194 Sum_probs=84.6
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--C--ccEEE
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--E--IDITV 137 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~--~pv~v 137 (956)
+.++++=+= +.-|.-.+.+++.+.++|+|.|-+|.. || ++.+...++..++.. + .|..+
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~-----------~G-----~~~~~aa~~~~~~~~~~g~~~~~li 119 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHAL-----------GG-----SQMIKSAKDGLIAGTPAGHSVPKLL 119 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG-----------GC-----HHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCC-----------CC-----HHHHHHHHHHHHHhcccCCCCceEE
Confidence 566776663 555677777888888999999999852 22 344555555554321 1 23222
Q ss_pred Ee----ccC---C--C---CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCc
Q psy2378 138 KH----RIG---I--D---DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPEL 205 (956)
Q Consensus 138 Ki----r~g---~--~---~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~i 205 (956)
-+ ..+ + + .....+...++|+...++|++.+..++. . +..+++..++-
T Consensus 120 ~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~~------------------e---~~~ir~~~~~~ 178 (259)
T 3tfx_A 120 AVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSPL------------------E---VKKLHENIGDD 178 (259)
T ss_dssp EECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCGG------------------G---HHHHHHHHCSS
T ss_pred EEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECHH------------------H---HHHHHhhcCCc
Confidence 11 211 0 0 1111234567888888999999877532 2 34455544333
Q ss_pred eEEEecCCCCH----HH------HHHHhhh-cCEEEEccccccCCcch
Q psy2378 206 EIIINGGIKTK----KE------IDLHLNY-IDGVMLGREAYKNPFLM 242 (956)
Q Consensus 206 pVi~nGgI~s~----~d------a~~~l~~-ad~VmiGR~~l~~P~l~ 242 (956)
.++.+.||.-. .| +.++++. +|.+.+||+....++-.
T Consensus 179 f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~ 226 (259)
T 3tfx_A 179 FLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPK 226 (259)
T ss_dssp SEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHH
T ss_pred cEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHH
Confidence 46667777532 11 5556666 99999999998866543
No 441
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=88.46 E-value=3.2 Score=44.36 Aligned_cols=125 Identities=14% Similarity=0.033 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-+..-..+.-.++++.+++.++- |.+- .|.. +..++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~~g-ViaG--vg~~---~t~~a 80 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGT----------TGLGPALSKDEKRQNLNALYDVTHK-LIFQ--VGSL---NLNDV 80 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHTTTCSC-EEEE--CCCS---CHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCC-eEEe--eCCC---CHHHH
Confidence 47888999999998999999988753 2333334555667899999888755 4433 3322 23578
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e-----cCCCCHHHHHHH
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDLH 222 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n-----GgI~s~~da~~~ 222 (956)
+++++.++++|+|++-+..-.. .. ......-.++.++|.+.+ ++|||. | |--.+++.+.++
T Consensus 81 i~la~~A~~~Gadavlv~~P~y--~~------~~s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSSHSPYY--FP------RLPEKFLAKYYEEIARIS-SHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHHHHHTSCCSEEEECCCCS--SC------SCCHHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHHHHHhcCCCEEEEcCCcC--CC------CCCHHHHHHHHHHHHHhc-CCCEEEEECchHhCcCCCHHHHhcc
Confidence 9999999999999998864321 00 000111245667888887 699863 4 433467776665
No 442
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=88.45 E-value=0.57 Score=46.44 Aligned_cols=66 Identities=9% Similarity=0.069 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
..-++.++....|++.+-... .--+.++++ . ++|||+.|.|.|.|++.+ ++. ||+|..
T Consensus 118 ~~~~~~I~~~kPD~iEiLPg~----------------v~p~~I~~v---~-~~PiIaGGlI~t~edv~~-l~aGA~aIsT 176 (188)
T 1vkf_A 118 ERGIEQIETLGVDVVEVLPGA----------------VAPKVARKI---P-GRTVIAAGLVETEEEARE-ILKHVSAIST 176 (188)
T ss_dssp HHHHHHHHHHTCSEEEEESGG----------------GHHHHHTTS---T-TSEEEEESCCCSHHHHHH-HTTTSSEEEE
T ss_pred hhhhhhccccCCCeEeecCCC----------------chHHHHHHh---c-CCCEEEECCcCCHHHHHH-HHCCCeEEEe
Confidence 445566666777776654221 123455555 4 799999999999999999 888 999999
Q ss_pred ccccccCC
Q psy2378 232 GREAYKNP 239 (956)
Q Consensus 232 GR~~l~~P 239 (956)
+.--||+.
T Consensus 177 s~~~LW~~ 184 (188)
T 1vkf_A 177 SSRILWKM 184 (188)
T ss_dssp CCHHHHTC
T ss_pred CCHHHhCC
Confidence 98777754
No 443
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=88.44 E-value=3.1 Score=44.68 Aligned_cols=150 Identities=9% Similarity=0.074 Sum_probs=88.9
Q ss_pred HHHHHHHcCCCEEEec--------CCCCcceeeeCcccccccCChHHHHHHHHHHhhccC--ccEEEEeccCCCCCCcHH
Q psy2378 81 SAKIIQKWGYDEINLN--------CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYD 150 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN--------~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~g~~~~~~~~ 150 (956)
.|+.++++|||+|=+- .|-| | ...-..+.+.+.++.|++.+. .||++-+..|+.+ .+
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~p------D----~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~---~~ 103 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQP------D----LAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGG---PI 103 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCC------S----SSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSS---HH
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCC------C----CCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCC---HH
Confidence 5667788999999872 1223 1 112345566677788877764 9999999999753 24
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccc-cccCCCCCCCCCCcCcH-HHHHHH---HHhC--CCceEEEecCCCCH-----HH
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPILKY-NFVYNL---KKDF--PELEIIINGGIKTK-----KE 218 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~~~~-~~i~~v---~~~~--~~ipVi~nGgI~s~-----~d 218 (956)
+..+.++.++++|++++++-..... ..|+.+. .. -... +.+.+| +++. .+.+++.+++.... ++
T Consensus 104 ~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~g--k~--l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~glde 179 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLEDQILTKRCGHLSG--KK--VVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEE 179 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBCCCC----------C--BCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCC--Ce--ecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHH
Confidence 5778899999999999999865420 0111110 00 1122 233333 2221 13456666666553 22
Q ss_pred H-HH---Hhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 219 I-DL---HLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 219 a-~~---~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
+ ++ +.+. ||+|++= .+.++..++++.+.+
T Consensus 180 Ai~Ra~ay~eAGAD~ifi~--~~~~~~~~~~i~~~~ 213 (307)
T 3lye_A 180 CIERLRAARDEGADVGLLE--GFRSKEQAAAAVAAL 213 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEec--CCCCHHHHHHHHHHc
Confidence 2 22 2333 9999984 356777777777655
No 444
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=88.44 E-value=4.6 Score=43.54 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t~ 90 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILAN----------FSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH--Y---STQ 90 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC--c---hHH
Confidence 47889999999999999999988642 23333334555567777777766 4788776532 1 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee----cCCCCHHHHHHHhhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGIKTKKEIDLHLNY 225 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n----GgI~s~~da~~~l~~ 225 (956)
+++++++.++++|+|++-+..-. +... .......-.++.+.|.+.+ ++||| .| |--.+++.+.++.+.
T Consensus 91 ~ai~la~~A~~~Gadavlv~~Py--y~~~----~~~s~~~l~~~f~~va~a~-~lPiilYn~P~tg~~l~~~~~~~La~~ 163 (309)
T 3fkr_A 91 VCAARSLRAQQLGAAMVMAMPPY--HGAT----FRVPEAQIFEFYARVSDAI-AIPIMVQDAPASGTALSAPFLARMARE 163 (309)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSC--BTTT----BCCCHHHHHHHHHHHHHHC-SSCEEEEECGGGCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC--CccC----CCCCHHHHHHHHHHHHHhc-CCCEEEEeCCCCCCCCCHHHHHHHHhh
Confidence 78999999999999999886432 1000 0000112246677888887 68875 34 544578877777643
No 445
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=88.39 E-value=0.63 Score=53.99 Aligned_cols=70 Identities=17% Similarity=0.306 Sum_probs=55.9
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 230 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vm 230 (956)
..+.++.+.++|++.|.+|... |. ....|+.++++++.+|++||+. |++.++++++.+.+. +|+|.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~----G~--------~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G~d~I~ 304 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAH----GH--------SRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAGADAVK 304 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC----CS--------SHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecC----Cc--------hHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcCCCEEE
Confidence 4577889999999999997542 11 1236789999999987799876 778899999888877 99999
Q ss_pred Eccc
Q psy2378 231 LGRE 234 (956)
Q Consensus 231 iGR~ 234 (956)
+|-+
T Consensus 305 v~~~ 308 (494)
T 1vrd_A 305 VGVG 308 (494)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 9654
No 446
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=88.34 E-value=4.1 Score=43.25 Aligned_cols=119 Identities=11% Similarity=0.140 Sum_probs=72.9
Q ss_pred CcccccccCChHHHHHHHHHHhhccCccEEEEecc-CC-CCC-------CcHHHHHHHHHHHHHcCCCEEEEcccccccc
Q psy2378 107 GFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI-GI-DDI-------NSYDFVRDFVGTVSSAGCRTFIVHARNAFLK 177 (956)
Q Consensus 107 ~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-g~-~~~-------~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~ 177 (956)
|+.--.+..|-+...++++...+. ++.|-.-+.. |. +++ ..+-+..+..+-+++.|+|+|.+.-++. .
T Consensus 104 DgS~lp~eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~--H 180 (286)
T 1gvf_A 104 DGSHFPFAENVKLVKSVVDFCHSQ-DCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTA--H 180 (286)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHT-TCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCC--S
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCcc--c
Confidence 433334566778888888887753 6666555532 22 111 0011234555557789999999987763 2
Q ss_pred cCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCH-HHHHHHhhh-cCEEEEcc
Q psy2378 178 KLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-KEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 178 g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~-~da~~~l~~-ad~VmiGR 233 (956)
|... ..+..+++.++++++.+ ++|++.-|+-..+ ++++++++. +-=|=|++
T Consensus 181 G~Y~----~~p~Ld~~~L~~I~~~~-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~T 233 (286)
T 1gvf_A 181 GLYS----KTPKIDFQRLAEIREVV-DVPLVLHGASDVPDEFVRRTIELGVTKVNVAT 233 (286)
T ss_dssp SCCS----SCCCCCHHHHHHHHHHC-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECH
T ss_pred cCcC----CCCccCHHHHHHHHHhc-CCCEEEECCCCCCHHHHHHHHHCCCeEEEECh
Confidence 2111 13458999999999998 6999988866655 457777765 44444444
No 447
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.33 E-value=2.2 Score=46.01 Aligned_cols=129 Identities=8% Similarity=0.058 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+-++...+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+ |.. +..
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~ 96 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGS----------NGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS--GCE---STQ 96 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec--CCC---CHH
Confidence 37888999998888999999988742 23333334555577888888877 46776643 322 235
Q ss_pred HHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHhh
Q psy2378 151 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 224 (956)
Q Consensus 151 ~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l~ 224 (956)
+++++++.++++|+|++-+..-.. +.. ......-.++.++|.+.+ ++||| .| |--.+++.+.++.+
T Consensus 97 ~ai~la~~A~~~Gadavlv~~P~y-~~~------~~s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 97 ATVEMTVSMAQVGADAAMVVTPCY-YRG------RMSSAALIHHYTKVADLS-PIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCT-TGG------GCCHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCc-CCC------CCCHHHHHHHHHHHHhhc-CCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 789999999999999998864321 000 000011245677788887 68976 44 33357888777753
No 448
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=88.25 E-value=4.1 Score=41.40 Aligned_cols=126 Identities=15% Similarity=0.040 Sum_probs=78.1
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccE--EEEecc
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDI--TVKHRI 141 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv--~vKir~ 141 (956)
++++-+=-.+.++..+.++.+ +.|+|.+|+.+ |. + -.+| .++++++|+.. +.|+ .+|+-
T Consensus 8 ~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~--~~-~---~~~G----------~~~i~~lr~~~~~~~i~ld~~l~- 69 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNV-ASYVDVIEVGT--IL-A---FAEG----------MKAVSTLRHNHPNHILVCDMKTT- 69 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHH-GGGCSEEEECH--HH-H---HHHT----------THHHHHHHHHCTTSEEEEEEEEC-
T ss_pred CeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCc--HH-H---HhcC----------HHHHHHHHHhCCCCcEEEEEeec-
Confidence 466666667788888888775 45899999974 21 0 0112 36788888773 4444 55543
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcH-HHHHHHHHhCCCceEEE-ecCCCCHHHH
Q psy2378 142 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY-NFVYNLKKDFPELEIII-NGGIKTKKEI 219 (956)
Q Consensus 142 g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~-~~i~~v~~~~~~ipVi~-nGgI~s~~da 219 (956)
+. ...+++.+.++|+|.+++|.-.. .... +.++.+++. +++++. .=++.|++++
T Consensus 70 --d~------p~~~~~~~~~aGad~i~vh~~~~--------------~~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~ 125 (218)
T 3jr2_A 70 --DG------GAILSRMAFEAGADWITVSAAAH--------------IATIAACKKVADEL--NGEIQIEIYGNWTMQDA 125 (218)
T ss_dssp --SC------HHHHHHHHHHHTCSEEEEETTSC--------------HHHHHHHHHHHHHH--TCEEEEECCSSCCHHHH
T ss_pred --cc------HHHHHHHHHhcCCCEEEEecCCC--------------HHHHHHHHHHHHHh--CCccceeeeecCCHHHH
Confidence 21 12467889999999999997531 0112 344455554 455542 3333578888
Q ss_pred HHHhhh-cCEEEEc
Q psy2378 220 DLHLNY-IDGVMLG 232 (956)
Q Consensus 220 ~~~l~~-ad~VmiG 232 (956)
.++.+. +|.+.+.
T Consensus 126 ~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 126 KAWVDLGITQAIYH 139 (218)
T ss_dssp HHHHHTTCCEEEEE
T ss_pred HHHHHcCccceeee
Confidence 888775 9987663
No 449
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=88.17 E-value=1.9 Score=46.19 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=68.6
Q ss_pred ccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCC
Q psy2378 109 FGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP 188 (956)
Q Consensus 109 ~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~ 188 (956)
-|+..+++.+++.++ . ..+.||.+|.....+. ++....+..+...|...+++--|...+ ++ . ..
T Consensus 114 IgA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~t~----~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y---~---~~ 177 (292)
T 1o60_A 114 LPAFLARQTDLVEAM----A-KTGAVINVKKPQFLSP----SQMGNIVEKIEECGNDKIILCDRGTNF-GY---D---NL 177 (292)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTCEEEEECCTTSCG----GGHHHHHHHHHHTTCCCEEEEECCEEC-ST---T---CE
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEeCCCCCCH----HHHHHHHHHHHHcCCCeEEEEECCCCC-CC---C---cc
Confidence 477788888865554 3 4699999997764222 246677888899998666665453211 11 1 11
Q ss_pred cCcHHHHHHHHHhCCCceEEEe-----------cCCCC------HHHHHHHhhh-cCEEEEccc
Q psy2378 189 ILKYNFVYNLKKDFPELEIIIN-----------GGIKT------KKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 189 ~~~~~~i~~v~~~~~~ipVi~n-----------GgI~s------~~da~~~l~~-ad~VmiGR~ 234 (956)
-.|+..+..+++..+++||+.. |+-.. ..-+....+. |||+||=+=
T Consensus 178 ~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H 241 (292)
T 1o60_A 178 IVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAH 241 (292)
T ss_dssp ECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEE
T ss_pred ccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEec
Confidence 2588888899988756899882 22112 2334455555 999998654
No 450
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=88.16 E-value=1.3 Score=41.17 Aligned_cols=54 Identities=15% Similarity=-0.010 Sum_probs=45.9
Q ss_pred CCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHHHHH
Q psy2378 899 GFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 899 gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i~~~ 952 (956)
+++..++.+..|.+....-..++.|++.||+....+ .+.||++|+.+...+...
T Consensus 50 ~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~~~~~~~ 110 (141)
T 3bro_A 50 EVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETIILSY 110 (141)
T ss_dssp CCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTHHHHHHH
T ss_pred CcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHHHHHHHH
Confidence 689999999999988788889999999999987532 689999999998876543
No 451
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=88.05 E-value=1.3 Score=41.51 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=49.5
Q ss_pred HhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 892 NALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 892 ~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
..|....+++..++.+..|.+....-..++.|++.||+++.. -.+.||++|+-+.+.+...
T Consensus 38 ~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~~~~~~ 105 (145)
T 3g3z_A 38 YTLATEGSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTES 105 (145)
T ss_dssp HHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHHHHHHHH
Confidence 334445679999999999998888888999999999998743 2599999999998876544
No 452
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.02 E-value=5.5 Score=42.99 Aligned_cols=128 Identities=7% Similarity=0.060 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~ 151 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+ |.. +..+
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv--g~~---~t~~ 90 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGI----------LGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV--SAP---GFAA 90 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTG----------GGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC--CCS---SHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCcc----------CcChhhCCHHHHHHHHHHHHHHcCCCcEEEec--CCC---CHHH
Confidence 47889999999999999999987642 23333334555567777777666 46776643 322 2357
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCC-CceEEE------ecCCCCHHHHHHHhh
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIII------NGGIKTKKEIDLHLN 224 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~-~ipVi~------nGgI~s~~da~~~l~ 224 (956)
++++++.++++|+|++-+..-. + ......-.++.+.|.+.++ ++|||. +|--.+++.+.++.+
T Consensus 91 ai~la~~A~~~Gadavlv~~P~-----~-----~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 91 MRRLARLSMDAGAAGVMIAPPP-----S-----LRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHHHHHTCSEEEECCCT-----T-----CCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCC-----C-----CCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 8999999999999999885321 0 0011122466777887773 399864 355567888877765
Q ss_pred h
Q psy2378 225 Y 225 (956)
Q Consensus 225 ~ 225 (956)
.
T Consensus 161 ~ 161 (313)
T 3dz1_A 161 D 161 (313)
T ss_dssp H
T ss_pred h
Confidence 4
No 453
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=87.98 E-value=0.64 Score=49.93 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=37.1
Q ss_pred HHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHH-HHHHHHh---CCCceEEEecCCCCHHHHHHHhhh-cCEEEEc
Q psy2378 158 TVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF-VYNLKKD---FPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 232 (956)
Q Consensus 158 ~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~-i~~v~~~---~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiG 232 (956)
...++|+|.|-++..+ +.++.. ++.+... +|++||.++||| +++.+.++.+. +|++.+|
T Consensus 214 ~A~~aGaD~I~ld~~~---------------~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vG 277 (294)
T 3c2e_A 214 EAIEAGADVIMLDNFK---------------GDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDDIDIYSTS 277 (294)
T ss_dssp HHHHHTCSEEECCC------------------------------------CCEEEEECCC-CC------CCCSCSEEECG
T ss_pred HHHHcCCCEEEECCCC---------------HHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 3446899999886532 122222 2222222 245899999999 89999999988 9999999
Q ss_pred cccccCCcc
Q psy2378 233 REAYKNPFL 241 (956)
Q Consensus 233 R~~l~~P~l 241 (956)
......|++
T Consensus 278 s~i~~a~~~ 286 (294)
T 3c2e_A 278 SIHQGTPVI 286 (294)
T ss_dssp GGTSSCCCC
T ss_pred chhcCCCCC
Confidence 987665654
No 454
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=87.98 E-value=5.6 Score=41.29 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=79.7
Q ss_pred HHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEecc-CCC---CCCcHHHHHHHH
Q psy2378 81 SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI-GID---DINSYDFVRDFV 156 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~-g~~---~~~~~~~~~~~a 156 (956)
.|..|++.|+|-|||+.+=. -|| + .|. ...++.+++.+++||.|=||+ +-+ ...+++...+=+
T Consensus 13 ~a~~A~~~GAdRIELc~~L~--------~GG-l--TPS--~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di 79 (256)
T 1twd_A 13 CALTAQQNGADRVELCAAPK--------EGG-L--TPS--LGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDV 79 (256)
T ss_dssp HHHHHHHTTCSEEEECBCGG--------GTC-B--CCC--HHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCcc--------cCC-C--CCC--HHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 44566778999999974211 111 1 232 234566677789999999988 221 112334455667
Q ss_pred HHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecC---CCCHHHHHHHhhh--cCEEE
Q psy2378 157 GTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG---IKTKKEIDLHLNY--IDGVM 230 (956)
Q Consensus 157 ~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGg---I~s~~da~~~l~~--ad~Vm 230 (956)
+.+.++|+|.+.+-.=+. .+..|.+.++++.+...+.||..-=- +.++..+.+.|.. +|-|.
T Consensus 80 ~~~~~~GadGvV~G~Lt~------------dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rIL 146 (256)
T 1twd_A 80 RTVRELGFPGLVTGVLDV------------DGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVL 146 (256)
T ss_dssp HHHHHTTCSEEEECCBCT------------TSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHcCCCEEEEeeECC------------CCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEE
Confidence 789999999998865441 12379999998887655688775432 3566666655544 77665
No 455
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=87.95 E-value=5.9 Score=40.59 Aligned_cols=138 Identities=15% Similarity=0.142 Sum_probs=81.1
Q ss_pred HHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHH
Q psy2378 82 AKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSS 161 (956)
Q Consensus 82 A~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~ 161 (956)
+..++++|+|.|-|+.+.- +..+| .+.+.++...+. ++-+.|-+.- . .+. +.+..
T Consensus 78 ~~~l~~~Ga~~VllghseR-----R~~~~--------e~~~k~~~A~~~-GL~~ivcVge--~--------~e~-~~~~~ 132 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEA-----PLKLN--------DLARLVAKAKSL-GLDVVVCAPD--P--------RTS-LAAAA 132 (226)
T ss_dssp HHHHHHHTCCEEEECCTTS-----CCBHH--------HHHHHHHHHHHT-TCEEEEEESS--H--------HHH-HHHHH
T ss_pred HHHHHHcCCCEEEEeeeec-----cCCHH--------HHHHHHHHHHHC-CCEEEEEeCC--H--------HHH-HHHhc
Confidence 3467788999999986542 11111 234444444432 5444333321 1 121 44567
Q ss_pred cCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHH-HHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCC
Q psy2378 162 AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYN-LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 162 ~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~-v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P 239 (956)
.+.+.|-+-.|.. .| +|.+-..-.+...+.+.+ +++..++++|+.-|+|++.++++.+... +||+.||.+++.-+
T Consensus 133 ~~~~iIayep~wa--iG-tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~ 209 (226)
T 1w0m_A 133 LGPHAVAVEPPEL--IG-TGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAK 209 (226)
T ss_dssp TCCSEEEECCGGG--TT-TSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCS
T ss_pred CCCCEEEEcChhh--hc-cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCc
Confidence 7888888888752 33 110000000111333333 3333346899999999999999888777 99999999999887
Q ss_pred cchHHHHH
Q psy2378 240 FLMSNFDL 247 (956)
Q Consensus 240 ~l~~~i~~ 247 (956)
++...+++
T Consensus 210 ~~~~~i~~ 217 (226)
T 1w0m_A 210 DPYAKIVE 217 (226)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 76655543
No 456
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=87.92 E-value=2 Score=44.24 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=63.0
Q ss_pred HHHHHHhhccCccEEEEeccCCCCCCc-HHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHH
Q psy2378 122 DCIKAMRDSVEIDITVKHRIGIDDINS-YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK 200 (956)
Q Consensus 122 eiv~~v~~~~~~pv~vKir~g~~~~~~-~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~ 200 (956)
+.++.+++.+++|+..-++.++++... .....+.++.+.++|+|.|++|..... . ..+....+.++.+++
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~------~---~~~~~~~~~i~~i~~ 129 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRD------R---HDGLDIASFIRQVKE 129 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSC------C---TTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccC------C---CCCccHHHHHHHHHH
Confidence 457888888899983323433322110 001235577889999999999975410 0 000123578899998
Q ss_pred hCCCceEEEecCCCCHHHHHHHhhh-cCEE
Q psy2378 201 DFPELEIIINGGIKTKKEIDLHLNY-IDGV 229 (956)
Q Consensus 201 ~~~~ipVi~nGgI~s~~da~~~l~~-ad~V 229 (956)
.+++++|+. ++.+++++..+.+. +|.|
T Consensus 130 ~~~~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 130 KYPNQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp HCTTCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred hCCCCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 876677665 67899999888877 9988
No 457
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=87.89 E-value=0.78 Score=43.00 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=45.3
Q ss_pred HhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHHHHH
Q psy2378 892 NALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 892 ~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i~~~ 952 (956)
..|....+++..++.+..|.+....-..++.|++.||+++..+ .+.||++|+-+.+.+...
T Consensus 44 ~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~~~~~~ 111 (142)
T 3ech_A 44 KLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHLHAELI 111 (142)
T ss_dssp HHHHHTTTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHHHHHHHH
Confidence 3344456899999999999887778889999999999987432 289999999999876544
No 458
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=87.80 E-value=2.1 Score=40.88 Aligned_cols=66 Identities=15% Similarity=0.194 Sum_probs=52.1
Q ss_pred HHHHHHHhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEc-CCEEeeCchhhchHHHHHH
Q psy2378 886 IFEFMLNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRN-NKNIKPTSFGRYFLNDLQQ 951 (956)
Q Consensus 886 ~~e~~~~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~-~~~~~lT~~G~~~~~~i~~ 951 (956)
+.+.+...+....+++...+.+.+|.+...+...++.|++.||+... +..+.||++|..+...+..
T Consensus 41 ~~~~i~~~l~~~~~~~~~~la~~l~vs~~tvs~~l~~Le~~Glv~r~~~~~~~lT~~g~~~~~~~~~ 107 (155)
T 2h09_A 41 YVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRE 107 (155)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTCEEEETTTEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEEecCCceEEChhHHHHHHHHHH
Confidence 33444444444567899999999999888888899999999999875 5789999999988876543
No 459
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=87.78 E-value=1.1 Score=41.65 Aligned_cols=60 Identities=15% Similarity=0.170 Sum_probs=48.5
Q ss_pred hhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHHHHHh
Q psy2378 894 LRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDLQQIF 953 (956)
Q Consensus 894 lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i~~~f 953 (956)
|....+++...+.+..|.+....-..++.|++.||++...+ .+.||++|+.+.+.+...+
T Consensus 43 l~~~~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~~~~~~~ 109 (138)
T 1jgs_A 43 IRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQLV 109 (138)
T ss_dssp HHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHHHHHHHHH
Confidence 34456788999999999988888889999999999987422 3899999999998765543
No 460
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=87.72 E-value=0.53 Score=53.27 Aligned_cols=96 Identities=11% Similarity=0.024 Sum_probs=65.6
Q ss_pred HHHHHHHHhhccCccEEEEeccCCC----CCCcHHHHHHHHHHHHHcCCC---EEEEcccccccccCCCCCCCCC---Cc
Q psy2378 120 VSDCIKAMRDSVEIDITVKHRIGID----DINSYDFVRDFVGTVSSAGCR---TFIVHARNAFLKKLNPKQNRKI---PI 189 (956)
Q Consensus 120 ~~eiv~~v~~~~~~pv~vKir~g~~----~~~~~~~~~~~a~~l~~~G~~---~i~vh~r~~~~~g~~~~~~~~~---~~ 189 (956)
..+.+++||++++-.+.+-+-.+.. ..-+.++++++++.|++.|+. +| - +... ++
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~~L~~~~~~~~l~i--E-------------qP~~~~~~~ 282 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYI--E-------------GPVDAGNKP 282 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEE--E-------------CCCCCSSHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHHHHHhccCCcceEE--E-------------CCcCCCCCc
Confidence 4488999998885433322222110 012345688999999987654 33 1 1111 14
Q ss_pred CcHHHHHHHHHh-----CCCceEEEecCCCCHHHHHHHhhh--cCEEEE
Q psy2378 190 LKYNFVYNLKKD-----FPELEIIINGGIKTKKEIDLHLNY--IDGVML 231 (956)
Q Consensus 190 ~~~~~i~~v~~~-----~~~ipVi~nGgI~s~~da~~~l~~--ad~Vmi 231 (956)
.||+..+++++. . ++||.+-=.+++++++.++++. +|.|.+
T Consensus 283 ~d~~~~~~l~~~l~~~g~-~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 330 (413)
T 1kko_A 283 DQIRMLTAITKELTRLGS-GVKIVADEWCNTYQDIVDFTDAGSCHMVQI 330 (413)
T ss_dssp HHHHHHHHHHHHHHHHTC-CCEEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred ccHHHHHHHHHhcccCCC-CCcEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 588889999887 6 6999988889999999999976 999987
No 461
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=87.71 E-value=2.1 Score=46.49 Aligned_cols=124 Identities=14% Similarity=0.087 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~~ 151 (956)
|.+.+.+.++.+.+.|+|+|=++.. -|-+..-..+.-.++++.+++.+ .+||.+-+ |.. +..+
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ 94 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGT----------NAEAFLLTREERAQLIATARKAVGPDFPIMAGV--GAH---STRQ 94 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC--CCS---SHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCC---CHHH
Confidence 7788999999999999999988742 23333334555567777777766 46777644 322 2357
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCc----CcHHHHHHHHHhCCCceEE-Ee------cCCCCHHHHH
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPI----LKYNFVYNLKKDFPELEII-IN------GGIKTKKEID 220 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~----~~~~~i~~v~~~~~~ipVi-~n------GgI~s~~da~ 220 (956)
++++++.++++|+|++-+..-. ++.+| .-.++.+.|.+.+ ++||+ .| |--.+++.+.
T Consensus 95 ai~la~~a~~~Gadavlv~~P~-----------y~~kp~~~~~l~~~f~~ia~a~-~lPiilYn~P~~t~g~~l~~~~~~ 162 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLPPA-----------YFGKATTPPVIKSFFDDVSCQS-PLPVVIYNFPGVCNGIDLDSDMIT 162 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECCCC-----------C---CCCHHHHHHHHHHHHHHC-SSCEEEEECCC----CCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCc-----------ccCCCCCHHHHHHHHHHHHhhC-CCCEEEEeCCcccCCCCCCHHHHH
Confidence 8999999999999999886432 11111 1246677888887 68986 32 4335788888
Q ss_pred HHhh
Q psy2378 221 LHLN 224 (956)
Q Consensus 221 ~~l~ 224 (956)
++.+
T Consensus 163 ~La~ 166 (318)
T 3qfe_A 163 TIAR 166 (318)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7765
No 462
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=87.66 E-value=0.98 Score=42.55 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=49.5
Q ss_pred HHhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEc-------CCEEeeCchhhchHHHHHHH
Q psy2378 891 LNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRN-------NKNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 891 ~~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~-------~~~~~lT~~G~~~~~~i~~~ 952 (956)
+..|....+++..++.+..|.+....-..++.|++.||+... ...+.||++|+.+.+.+...
T Consensus 46 L~~l~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~~~~~~~ 114 (148)
T 3nrv_A 46 ISVLSSASDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELYEVASDF 114 (148)
T ss_dssp HHHHHHSSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHHHHHHHH
Confidence 333444567999999999999888888899999999999865 35689999999999876544
No 463
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=87.65 E-value=1 Score=48.25 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHH
Q psy2378 75 PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRD 154 (956)
Q Consensus 75 ~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~ 154 (956)
++...+.|+...+.|+|.||||+-+--+ +.-.-+.....+.+..+++++++.+++|++|-..- .+
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeStrP----ga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~-----------~~ 126 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRP----GFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYK-----------AE 126 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC--------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSC-----------HH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCC-----------HH
Confidence 5667777777788999999999755211 10011122345566777788888889999986431 25
Q ss_pred HHHHHHHcCCCEEE
Q psy2378 155 FVGTVSSAGCRTFI 168 (956)
Q Consensus 155 ~a~~l~~~G~~~i~ 168 (956)
++++..++|++.|.
T Consensus 127 V~~aAl~aGa~iIN 140 (297)
T 1tx2_A 127 VAKQAIEAGAHIIN 140 (297)
T ss_dssp HHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 67777777999994
No 464
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=87.56 E-value=1.6 Score=38.29 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=46.9
Q ss_pred hhhhccCCChhhHHH-HhCCCHHHHHHHHHHHHHCCCeEEcCCEEeeCchhhchHHHHHHH
Q psy2378 893 ALRLKDGFSPNLFFE-RTGINIKIIESKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 893 ~lr~~~gi~~~~~~~-~~g~~~~~~~~~l~~l~~~Gl~~~~~~~~~lT~~G~~~~~~i~~~ 952 (956)
.+......+..++.+ ..+.+-..+..-++.|+++||++.+++.+.||++|+-........
T Consensus 24 ~L~~~~~~t~~~Lae~~l~~drstvsrnl~~L~r~GlVe~~~~Dl~LT~~G~~~l~~a~~~ 84 (95)
T 1bja_A 24 TIAKKDFITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLIITGEAQDIISNAATL 84 (95)
T ss_dssp HHHHSTTBCHHHHHHTCTTSCHHHHHHHHHHHHTTTSEEEETTEEEECHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHhcccHHHHHHHHHHHHHCCCeecCCCCeeeCHhHHHHHHHHHHH
Confidence 344444677888888 777776667778999999999987677799999999988776543
No 465
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=87.55 E-value=0.38 Score=54.47 Aligned_cols=150 Identities=12% Similarity=0.135 Sum_probs=89.8
Q ss_pred CCCCEEEEecC---CCHHHHHHHHHHHHHcC-CCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEE
Q psy2378 62 EEHPIAFQVGD---NEPKKLAKSAKIIQKWG-YDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITV 137 (956)
Q Consensus 62 ~~~p~~vQl~g---~~~~~~~~aA~~~~~~G-~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v 137 (956)
..-|+..++.+ .+|+++.+.|+.+.+.| |..+-+-.|.. +.......+.-.+.+++||++++..+.+
T Consensus 165 ~~vp~~~~~g~~~~~~~~~~~~~a~~~~~~G~~~~~KiKvG~~---------~~~~~~~~~~d~~~v~avR~~~G~~~~l 235 (413)
T 1kcz_A 165 NAVPVFAQSGDDRYDNVDKMIIKEADVLPHALINNVEEKLGLK---------GEKLLEYVKWLRDRIIKLRVREDYAPIF 235 (413)
T ss_dssp CCCCEECCCTTCTTHHHHHHHHTTCSEEEECCCCCCCCCCCTT---------SHHHHHHHHHHHHHHHHHCSSTTCCCEE
T ss_pred CCeeeeEecCccccCCHHHHHHHHHHHHHhcchhheeeccCCC---------ccchhhHHHHHHHHHHHHHHhcCCCceE
Confidence 45566555433 23555555554444456 66666543310 0001111122568899999887544333
Q ss_pred EeccCCCCC------CcHHHHHHHHHHHHHc--CCC-EEEEcccccccccCCCCCCCCC---CcCcHHHHHHHHHh----
Q psy2378 138 KHRIGIDDI------NSYDFVRDFVGTVSSA--GCR-TFIVHARNAFLKKLNPKQNRKI---PILKYNFVYNLKKD---- 201 (956)
Q Consensus 138 Kir~g~~~~------~~~~~~~~~a~~l~~~--G~~-~i~vh~r~~~~~g~~~~~~~~~---~~~~~~~i~~v~~~---- 201 (956)
-+-.+ .. -+.++++++++.|++. ++. +|- +... ++.+|+..+++++.
T Consensus 236 ~vDaN--~~~~~~~~~~~~~a~~~~~~L~~~~~~i~~~iE---------------qP~~~~~~~~d~~~~~~l~~~l~~~ 298 (413)
T 1kcz_A 236 HIDVY--GTIGAAFDVDIKAMADYIQTLAEAAKPFHLRIE---------------GPMDVEDRQKQMEAMRDLRAELDGR 298 (413)
T ss_dssp EEECT--THHHHHTTTCHHHHHHHHHHHHHHHTTSCEEEE---------------CSBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEecC--CCcccccCCCHHHHHHHHHHHHhhcCCcceEEe---------------cCCCCCCCcccHHHHHHHHHhhhcC
Confidence 33222 11 1235688999999998 555 441 1111 23488889999987
Q ss_pred -CCCceEEEecCCCCHHHHHHHhhh--cCEEEEccccccC
Q psy2378 202 -FPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKN 238 (956)
Q Consensus 202 -~~~ipVi~nGgI~s~~da~~~l~~--ad~VmiGR~~l~~ 238 (956)
. ++||.+-=.+++++++.++++. +|.|.+=-.-++.
T Consensus 299 g~-~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GG 337 (413)
T 1kcz_A 299 GV-DAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGG 337 (413)
T ss_dssp TC-CEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSS
T ss_pred CC-CCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCC
Confidence 6 6999988889999999999986 9999874443333
No 466
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=87.54 E-value=1.2 Score=41.61 Aligned_cols=59 Identities=15% Similarity=0.112 Sum_probs=48.7
Q ss_pred hhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 894 LRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 894 lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
|....+++..++.+..+.+....-..++.|++.||+++.. -.+.||++|+-+.+.+...
T Consensus 46 l~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~~~~~~ 111 (143)
T 3oop_A 46 IEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETTELRDI 111 (143)
T ss_dssp HHHHSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHHHHHHH
T ss_pred HHHcCCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHHHHHHHH
Confidence 3444678999999999998888888999999999998743 3589999999999876544
No 467
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=87.53 E-value=5.1 Score=40.87 Aligned_cols=90 Identities=16% Similarity=0.119 Sum_probs=62.7
Q ss_pred EEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCC
Q psy2378 66 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD 145 (956)
Q Consensus 66 ~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~ 145 (956)
+.+-|.+.+.+++.+.++. .|+|.||+=. |-+.. .+++.+.++++.+|+. ++|+.+=+|..++.
T Consensus 3 icv~l~~~~~~~~~~~~~~---~~~D~vElRv---------D~l~~---~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eG 66 (219)
T 2egz_A 3 IAVPLDDTNFSENLKKAKE---KGADIVELRV---------DQFSD---TSLNYVKEKLEEVHSQ-GLKTILTIRSPEEG 66 (219)
T ss_dssp EEEEECSTTHHHHHHHHHH---HTCSEEEEEG---------GGCSC---CCHHHHHHHHHHHHHT-TCEEEEECCCGGGT
T ss_pred EEEEeCCCCHHHHHHHHHH---cCCCEEEEEe---------ccccc---cCHHHHHHHHHHHHhc-CCcEEEEEeehhcc
Confidence 6788999999987666544 4899999933 32211 1246788889999886 79999999986553
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEccc
Q psy2378 146 INSYDFVRDFVGTVSSAGCRTFIVHAR 172 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~~~G~~~i~vh~r 172 (956)
+.+.++..++.+.+.+. +++|.|.-.
T Consensus 67 G~~~~~~~~ll~~~~~~-~d~iDvEl~ 92 (219)
T 2egz_A 67 GREVKNREELFEELSPL-SDYTDIELS 92 (219)
T ss_dssp CCCCTTHHHHHHHHTTT-SSEEEEETT
T ss_pred CCCHHHHHHHHHHHHhc-CCEEEEEcc
Confidence 32122345666777777 999998643
No 468
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=87.44 E-value=1.1 Score=43.16 Aligned_cols=59 Identities=12% Similarity=0.117 Sum_probs=48.8
Q ss_pred hhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 894 LRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 894 lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
|....+++..++.+..|.+....-..++.|++.||+++.. -.+.||++|+-+.+.+...
T Consensus 62 l~~~~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~~~~~~ 127 (161)
T 3e6m_A 62 LSAYGELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKLAEISPL 127 (161)
T ss_dssp HHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHHHHHHHH
Confidence 3344578899999999998888888999999999998754 3589999999999877554
No 469
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=87.38 E-value=1.2 Score=42.81 Aligned_cols=61 Identities=21% Similarity=0.174 Sum_probs=49.6
Q ss_pred HhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 892 NALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 892 ~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
..|....+++..++.+..|.+....-..++.|++.||+++.. -.+.||++|+-+...+...
T Consensus 53 ~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~~~~~~ 120 (162)
T 3k0l_A 53 SVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLNQCNQV 120 (162)
T ss_dssp HHHHHCTTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHHHHHHHH
Confidence 334455689999999999998877888999999999998743 2489999999999877554
No 470
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=87.36 E-value=4 Score=40.92 Aligned_cols=128 Identities=13% Similarity=-0.009 Sum_probs=75.6
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGI 143 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~ 143 (956)
++++-+-..+.++..+.++.+.+ |+|.||++.+. . . .+| .++++++++.. +.|+.+-+-..
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~--~--~--~~g----------~~~i~~l~~~~~~~~i~~~l~~~- 63 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAE-YVDIIELGTPL--I--K--AEG----------LSVITAVKKAHPDKIVFADMKTM- 63 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGG-GCSEEEECHHH--H--H--HHC----------THHHHHHHHHSTTSEEEEEEEEC-
T ss_pred eEEEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHH--H--H--hhC----------HHHHHHHHHhCCCCeEEEEEEec-
Confidence 35556666788888888888877 89999996532 1 1 122 24677777776 77887633222
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHH-HHHHHHHhCCCceE-EEecCCCCHHH-HH
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN-FVYNLKKDFPELEI-IINGGIKTKKE-ID 220 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~-~i~~v~~~~~~ipV-i~nGgI~s~~d-a~ 220 (956)
+ . ...+++.+.++|+|.+++|.-.. ..... .++.+++. ++++ +..-...++++ ++
T Consensus 64 d---i---~~~~~~~a~~~Gad~v~vh~~~~--------------~~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~ 121 (207)
T 3ajx_A 64 D---A---GELEADIAFKAGADLVTVLGSAD--------------DSTIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQ 121 (207)
T ss_dssp S---C---HHHHHHHHHHTTCSEEEEETTSC--------------HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHH
T ss_pred C---c---cHHHHHHHHhCCCCEEEEeccCC--------------hHHHHHHHHHHHHc--CCceEEEEecCCChHHHHH
Confidence 2 1 12356888999999999997531 01222 22333332 4555 21223446766 44
Q ss_pred HHhhh-cCEEEEc
Q psy2378 221 LHLNY-IDGVMLG 232 (956)
Q Consensus 221 ~~l~~-ad~VmiG 232 (956)
.+.+. +|.|.+.
T Consensus 122 ~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 122 EVRALGAKFVEMH 134 (207)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHhCCCEEEEE
Confidence 44444 8988443
No 471
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=87.29 E-value=1.6 Score=40.91 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=48.5
Q ss_pred hhhh-ccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHHHHH
Q psy2378 893 ALRL-KDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 893 ~lr~-~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i~~~ 952 (956)
.|.. ..+++...+.+..|.+....-..++.|++.||+....+ .+.||++|+.+...+...
T Consensus 43 ~l~~~~~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~~~~~~ 110 (147)
T 2hr3_A 43 AIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNLYGNRAK 110 (147)
T ss_dssp HHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHHHHHHHH
Confidence 3444 56799999999999988888889999999999987532 389999999998876543
No 472
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=87.26 E-value=2.7 Score=44.64 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=67.7
Q ss_pred ccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCC
Q psy2378 109 FGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP 188 (956)
Q Consensus 109 ~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~ 188 (956)
.|+..+++.+++.++ . .++.||.+|.....+. ++....+..+...|...+++--|+..+ ++ ...
T Consensus 111 Iga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~t~----~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~------~~~ 174 (280)
T 2qkf_A 111 LPAFLARQTDLVVAM----A-KTGNVVNIKKPQFLSP----SQMKNIVEKFHEAGNGKLILCERGSSF-GY------DNL 174 (280)
T ss_dssp ECGGGTTBHHHHHHH----H-HTCCEEEEECCTTSCG----GGHHHHHHHHHHTTCCCEEEEECCEEC-ST------TCE
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEECCCCCCH----HHHHHHHHHHHHcCCCeEEEEECCCCC-CC------Ccc
Confidence 577788888865554 2 4699999997764222 246677888899998666665454211 11 111
Q ss_pred cCcHHHHHHHHHhCCCceEEEe-----------cCCCC------HHHHHHHhhh-cCEEEEccc
Q psy2378 189 ILKYNFVYNLKKDFPELEIIIN-----------GGIKT------KKEIDLHLNY-IDGVMLGRE 234 (956)
Q Consensus 189 ~~~~~~i~~v~~~~~~ipVi~n-----------GgI~s------~~da~~~l~~-ad~VmiGR~ 234 (956)
-.|+..+..+++..+++||+.. |+-.. ..-+....+. |||+||=+=
T Consensus 175 ~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H 238 (280)
T 2qkf_A 175 VVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESH 238 (280)
T ss_dssp ECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC-
T ss_pred ccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeec
Confidence 2578888899988756899983 22111 2234444444 999998654
No 473
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=87.21 E-value=1.2 Score=38.86 Aligned_cols=60 Identities=22% Similarity=0.199 Sum_probs=48.8
Q ss_pred hhhcc-CCChhhHHHHhCCCHHH-HHHHHHHHHHCCCeEEc-----CCEEeeCchhhchHHHHHHHh
Q psy2378 894 LRLKD-GFSPNLFFERTGINIKI-IESKLKNAEKLGLLKRN-----NKNIKPTSFGRYFLNDLQQIF 953 (956)
Q Consensus 894 lr~~~-gi~~~~~~~~~g~~~~~-~~~~l~~l~~~Gl~~~~-----~~~~~lT~~G~~~~~~i~~~f 953 (956)
+.... +++..++.+..|.+... .-..++.|++.||+..+ ...+.||++|+.+...+...+
T Consensus 24 l~~~~~~~t~~eLa~~l~is~~t~vs~~l~~Le~~Glv~~~~~drR~~~~~LT~~G~~~~~~~~~~~ 90 (95)
T 2pg4_A 24 FEKKGYEPSLAEIVKASGVSEKTFFMGLKDRLIRAGLVKEETLSYRVKTLKLTEKGRRLAECLEKCR 90 (95)
T ss_dssp HHHTTCCCCHHHHHHHHCCCHHHHHTTHHHHHHHTTSEEEEEEETTEEEEEECHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCHHHHHHHHCCCchHHHHHHHHHHHHCCCeecCCCCCCeEEEEECHhHHHHHHHHHHHH
Confidence 33344 69999999999999888 88899999999999843 134899999999998876543
No 474
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.13 E-value=2.3 Score=45.93 Aligned_cols=127 Identities=13% Similarity=-0.018 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc--CccEEEEeccCCCCCCcHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 150 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~--~~pv~vKir~g~~~~~~~~ 150 (956)
-|.+.+.+.++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.+ .+||.+-+.. . +..
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~--~---~t~ 89 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGT----------TAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT--N---DTR 89 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESST----------TTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--c---CHH
Confidence 36788899999988999999999853 23233334555577888887776 4677775432 2 235
Q ss_pred HHHHHHHHHHHcCC-CEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEE-Ee-----cCCCCHHHHHHHh
Q psy2378 151 FVRDFVGTVSSAGC-RTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 223 (956)
Q Consensus 151 ~~~~~a~~l~~~G~-~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi-~n-----GgI~s~~da~~~l 223 (956)
+++++++.++++|+ |++-+..-.. .. . ....-.++.+.|.+.+ ++||+ .| |--.+++.+.++.
T Consensus 90 ~ai~la~~A~~~Ga~davlv~~P~y--~~---~----s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 159 (311)
T 3h5d_A 90 DSIEFVKEVAEFGGFAAGLAIVPYY--NK---P----SQEGMYQHFKAIADAS-DLPIIIYNIPGRVVVELTPETMLRLA 159 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEECCCS--SC---C----CHHHHHHHHHHHHHSC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEcCCCC--CC---C----CHHHHHHHHHHHHHhC-CCCEEEEecccccCCCCCHHHHHHHh
Confidence 78999999999997 9998864321 00 0 0011245667787777 78876 44 5445777777665
Q ss_pred h
Q psy2378 224 N 224 (956)
Q Consensus 224 ~ 224 (956)
+
T Consensus 160 ~ 160 (311)
T 3h5d_A 160 D 160 (311)
T ss_dssp T
T ss_pred c
Confidence 4
No 475
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=87.02 E-value=1.2 Score=42.64 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=48.3
Q ss_pred hhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 894 LRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 894 lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
|....|++..++.+..+.+....-..++.|++.||+++.. -.+.||++|+-+.+.+...
T Consensus 59 l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~~~~~~ 124 (159)
T 3s2w_A 59 LYREDGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEPDMKKI 124 (159)
T ss_dssp HHHSCSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHHHHHHHH
Confidence 3345678899999999998888888999999999998743 2589999999999876544
No 476
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.88 E-value=2.2 Score=45.39 Aligned_cols=80 Identities=9% Similarity=0.041 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
.+++...+.|+...+.|+|.||||+-+.-+. .-.-+.....+.+..+++++++. ++||+|-..-
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpg----a~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~~----------- 89 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPG----ATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMR----------- 89 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC------------------HHHHHHHHHHHHHT-TCCEEEECSC-----------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCC----CCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCCC-----------
Confidence 4788889999999999999999996431110 00112234577788888888876 8999886432
Q ss_pred HHHHHHHHHcCCCEEE
Q psy2378 153 RDFVGTVSSAGCRTFI 168 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~ 168 (956)
.+++++..++|++.|.
T Consensus 90 ~~va~aAl~aGa~iIN 105 (280)
T 1eye_A 90 ADVARAALQNGAQMVN 105 (280)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 2667778888998885
No 477
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=86.85 E-value=5 Score=41.89 Aligned_cols=146 Identities=14% Similarity=0.145 Sum_probs=85.5
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhc-cCcc----EE
Q psy2378 63 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEID----IT 136 (956)
Q Consensus 63 ~~p~~vQl~-g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~-~~~p----v~ 136 (956)
+.++++=+= +.-|...+.+++.+.++|+|.|-+|. +|| ++.+...++...+. .+.| |+
T Consensus 78 g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~-----------~~G-----~~~~~~a~~~~~~~g~~~~~li~Vt 141 (255)
T 3ldv_A 78 GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHA-----------SGG-----ERMMAASREILEPYGKERPLLIGVT 141 (255)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEG-----------GGC-----HHHHHHHHHHHGGGGGGSCEEEEEC
T ss_pred CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEec-----------cCC-----HHHHHHHHHHHhhcCCCCceEEEEE
Confidence 667776664 44566667777888899999999985 333 34455555555432 1223 33
Q ss_pred EEeccCCC-------CCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE
Q psy2378 137 VKHRIGID-------DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 209 (956)
Q Consensus 137 vKir~g~~-------~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~ 209 (956)
+..+.... .....+...++++...++|++.+.+++. .+..+|+..++-.++.
T Consensus 142 vLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa~---------------------e~~~iR~~~g~~fl~V 200 (255)
T 3ldv_A 142 VLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQ---------------------EASLLKQHLGREFKLV 200 (255)
T ss_dssp SCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCHH---------------------HHHHHHHHHCTTSEEE
T ss_pred EEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECHH---------------------HHHHHHHhcCCCcEEE
Confidence 33332210 0111234567788888899999876532 2455666543333555
Q ss_pred ecCCCCHH----------HHHHHhhh-cCEEEEccccccCCcchHHH
Q psy2378 210 NGGIKTKK----------EIDLHLNY-IDGVMLGREAYKNPFLMSNF 245 (956)
Q Consensus 210 nGgI~s~~----------da~~~l~~-ad~VmiGR~~l~~P~l~~~i 245 (956)
+.||.-.. ...++++. +|.+.+||+....++-...+
T Consensus 201 tPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~ 247 (255)
T 3ldv_A 201 TPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVL 247 (255)
T ss_dssp EECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHH
T ss_pred eCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHH
Confidence 56554210 13445556 99999999999876654433
No 478
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=86.80 E-value=1.9 Score=45.84 Aligned_cols=105 Identities=14% Similarity=0.192 Sum_probs=67.7
Q ss_pred cccccCChHHH-----HHHHHHHhhccC-ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCC
Q psy2378 110 GAILMTKPLLV-----SDCIKAMRDSVE-IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ 183 (956)
Q Consensus 110 G~~l~~~~~~~-----~eiv~~v~~~~~-~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~ 183 (956)
.+.|.++.+.. .+.++++|+..+ .|+.|-+. +. +-++.+.++|+|.|-+|.-+
T Consensus 166 d~vlikdnHi~~ag~i~~av~~ar~~~~~~~I~Vev~-------t~----eea~eal~aGaD~I~LDn~~---------- 224 (284)
T 1qpo_A 166 DAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVD-------SL----EQLDAVLPEKPELILLDNFA---------- 224 (284)
T ss_dssp SSEEECHHHHHHHSSHHHHHHHHHHHCTTSCEEEEES-------SH----HHHHHHGGGCCSEEEEETCC----------
T ss_pred hhhcccHhHHHHcCCHHHHHHHHHHhCCCCCEEEEeC-------CH----HHHHHHHHcCCCEEEECCCC----------
Confidence 34455544332 345666666542 24444333 12 23455566899999998743
Q ss_pred CCCCCcCcH-HHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEEccccccCCcc
Q psy2378 184 NRKIPILKY-NFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 241 (956)
Q Consensus 184 ~~~~~~~~~-~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~VmiGR~~l~~P~l 241 (956)
|.+. +.++.++...+++++.++||| +++.+.++.+. +|++.+|.....-|++
T Consensus 225 -----~~~~~~~v~~l~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~~~ 278 (284)
T 1qpo_A 225 -----VWQTQTAVQRRDSRAPTVMLESSGGL-SLQTAATYAETGVDYLAVGALTHSVRVL 278 (284)
T ss_dssp -----HHHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHHTTCSEEECGGGTSSBCCC
T ss_pred -----HHHHHHHHHHhhccCCCeEEEEECCC-CHHHHHHHHhcCCCEEEECHHHcCCCCc
Confidence 1232 345556654457899999999 69999999888 9999999976666653
No 479
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=86.77 E-value=0.95 Score=50.98 Aligned_cols=67 Identities=18% Similarity=0.294 Sum_probs=52.7
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
.+.++.+.++|+|.|.++... | .+...|+.++.+++.++++||++ |++.++++++.+.+. +|+|.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~----g--------~~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAH----G--------HSTRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSC----C--------SSHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCC----C--------ChHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEE
Confidence 466778889999999986321 1 01235788999999886799986 678899999999887 999999
Q ss_pred c
Q psy2378 232 G 232 (956)
Q Consensus 232 G 232 (956)
|
T Consensus 222 g 222 (404)
T 1eep_A 222 G 222 (404)
T ss_dssp C
T ss_pred C
Confidence 5
No 480
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=86.75 E-value=2.4 Score=49.84 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 153 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~ 153 (956)
+++...+-|+...+.|+|.||||.| +.....++.+.+++..+++.+++|++|-..- .
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg------------~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~-----------~ 394 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFG------------IESQIDVRYVEKIVQTLPYVSNVPLSLDIQN-----------V 394 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECS------------SGGGSCHHHHHHHHHHHHHHTCSCEEEECCC-----------H
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC------------CCCCCHHHHHHHHHHHHHhhCCceEEEeCCC-----------H
Confidence 3456666677777899999999943 3334567888888888888889999886431 2
Q ss_pred HHHHHHHHc--CCCEEE-EcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec
Q psy2378 154 DFVGTVSSA--GCRTFI-VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 211 (956)
Q Consensus 154 ~~a~~l~~~--G~~~i~-vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG 211 (956)
+++++..++ |++.|. |++.. .+++.+.++.+.. +.||++.-
T Consensus 395 ~v~eaal~~~~G~~iINdis~~~----------------~~~~~~~~~~~~~-g~~vV~m~ 438 (566)
T 1q7z_A 395 DLTERALRAYPGRSLFNSAKVDE----------------EELEMKINLLKKY-GGTLIVLL 438 (566)
T ss_dssp HHHHHHHHHCSSCCEEEEEESCH----------------HHHHHHHHHHHHH-CCEEEEES
T ss_pred HHHHHHHHhcCCCCEEEECCcch----------------hhHHHHHHHHHHh-CCeEEEEe
Confidence 556666666 998874 33321 1234455555555 67888743
No 481
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=86.73 E-value=1.1 Score=42.45 Aligned_cols=61 Identities=18% Similarity=0.147 Sum_probs=49.1
Q ss_pred hhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHHh
Q psy2378 893 ALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQIF 953 (956)
Q Consensus 893 ~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~f 953 (956)
.|....+++..++.+..+.+....-..++.|++.||+++.. -.+.||++|+-+.+.+...+
T Consensus 49 ~l~~~~~~~~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~~~~~~~ 116 (149)
T 4hbl_A 49 TLWEENPQTLNSIGRHLDLSSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQEAVFEAI 116 (149)
T ss_dssp HHHHSSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHHHHHHHHH
Confidence 34445778899999999998888888999999999998642 25899999999998876654
No 482
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=86.68 E-value=1.5 Score=41.28 Aligned_cols=59 Identities=17% Similarity=0.236 Sum_probs=48.0
Q ss_pred hhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHHHHH
Q psy2378 894 LRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 894 lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i~~~ 952 (956)
|....+++...+.+..|.+.......++.|++.||+....+ .+.||++|+.+...+...
T Consensus 49 l~~~~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~~~~~~ 114 (152)
T 3bj6_A 49 LSLTPGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIITAIRAD 114 (152)
T ss_dssp HHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCSSSTTSCEEEECHHHHHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecCCcccccceeeEEChhhHHHHHHHHHH
Confidence 33345788999999999988788889999999999988543 689999999988876443
No 483
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.64 E-value=2.5 Score=46.17 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=68.0
Q ss_pred ChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHH
Q psy2378 116 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 195 (956)
Q Consensus 116 ~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i 195 (956)
+++.+.+.++.+++.++.|+.|.+-.. +. ...+.++.+.++|+|.|.+|+... .+.+
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~-----~~~~~~~~a~~~g~d~V~~~~g~p-----------------~~~i 103 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-SP-----FVEDIVDLVIEEGVKVVTTGAGNP-----------------SKYM 103 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-ST-----THHHHHHHHHHTTCSEEEECSSCG-----------------GGTH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-CC-----CHHHHHHHHHHCCCCEEEECCCCh-----------------HHHH
Confidence 578888899999988888988876542 11 134678888999999999997531 2346
Q ss_pred HHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE-cc
Q psy2378 196 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 233 (956)
Q Consensus 196 ~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi-GR 233 (956)
+.+++. ++||+. .+.+.++++.+.+. +|+|.+ |+
T Consensus 104 ~~l~~~--g~~v~~--~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 104 ERFHEA--GIIVIP--VVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp HHHHHT--TCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHc--CCeEEE--EeCCHHHHHHHHHcCCCEEEEECC
Confidence 667663 689885 47899999888777 999988 54
No 484
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=86.61 E-value=8.5 Score=40.38 Aligned_cols=128 Identities=15% Similarity=0.191 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
.+++...+.|+.++++|+|.|-...--|-+.. -++-+ +. ..-.++++.+++..++|+..-+ ++..
T Consensus 34 ~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~--~~~~g-~~---~egl~~l~~~~~~~Gl~~~te~---~d~~------ 98 (262)
T 1zco_A 34 ESREQIMKVAEFLAEVGIKVLRGGAFKPRTSP--YSFQG-YG---EKALRWMREAADEYGLVTVTEV---MDTR------ 98 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSCCCSST--TSCCC-CT---HHHHHHHHHHHHHHTCEEEEEC---CCGG------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecccCCCc--ccccC-cc---HHHHHHHHHHHHHcCCcEEEee---CCHH------
Confidence 47899999999999999999877654442211 11111 11 3334566777777899986542 2221
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCC-CHHHHHHHhhh------
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK-TKKEIDLHLNY------ 225 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~-s~~da~~~l~~------ 225 (956)
-+..+.+. +|++-|-+|+- -++..++++.+ . +.||+..-|.. |++++..+++.
T Consensus 99 --~~~~l~~~-vd~~kIga~~~---------------~n~~ll~~~a~-~-~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn 158 (262)
T 1zco_A 99 --HVELVAKY-SDILQIGARNS---------------QNFELLKEVGK-V-ENPVLLKRGMGNTIQELLYSAEYIMAQGN 158 (262)
T ss_dssp --GHHHHHHH-CSEEEECGGGT---------------TCHHHHHHHTT-S-SSCEEEECCTTCCHHHHHHHHHHHHTTTC
T ss_pred --hHHHHHhh-CCEEEECcccc---------------cCHHHHHHHHh-c-CCcEEEecCCCCCHHHHHHHHHHHHHCCC
Confidence 14556777 99999999873 36778888877 4 79999888887 99998877653
Q ss_pred cCEEEEcccc
Q psy2378 226 IDGVMLGREA 235 (956)
Q Consensus 226 ad~VmiGR~~ 235 (956)
-+.+.+=||.
T Consensus 159 ~~i~L~~RG~ 168 (262)
T 1zco_A 159 ENVILCERGI 168 (262)
T ss_dssp CCEEEEECCB
T ss_pred CeEEEEECCC
Confidence 3556666663
No 485
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=86.57 E-value=2.6 Score=42.89 Aligned_cols=69 Identities=14% Similarity=0.203 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-------ecCC---CCHHHH
Q psy2378 150 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-------NGGI---KTKKEI 219 (956)
Q Consensus 150 ~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-------nGgI---~s~~da 219 (956)
+...++++.++++|++++++. ..+.++++++.+ ++|+++ .+++ .+.+++
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~--------------------~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i 81 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRAN--------------------TKEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEV 81 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE--------------------SHHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHH
T ss_pred ccHHHHHHHHHHCCCeeeccC--------------------CHHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHH
Confidence 467899999999999999662 235688899887 799974 2334 456778
Q ss_pred HHHhhh-cCEEEEccccccCC
Q psy2378 220 DLHLNY-IDGVMLGREAYKNP 239 (956)
Q Consensus 220 ~~~l~~-ad~VmiGR~~l~~P 239 (956)
+.+++. +|.|.++-.+..+|
T Consensus 82 ~~~~~~Gad~v~l~~~~~~~p 102 (223)
T 1y0e_A 82 DELIESQCEVIALDATLQQRP 102 (223)
T ss_dssp HHHHHHTCSEEEEECSCSCCS
T ss_pred HHHHhCCCCEEEEeeecccCc
Confidence 888877 99999988777666
No 486
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=86.50 E-value=5.1 Score=44.32 Aligned_cols=94 Identities=15% Similarity=0.201 Sum_probs=64.3
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccc--------cccCC-----------------CCC---
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF--------LKKLN-----------------PKQ--- 183 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~--------~~g~~-----------------~~~--- 183 (956)
+.|+++-+-...+. +...+++++++++|+++|.+|..+.. ..++. +..
T Consensus 132 ~~~~~~QLy~~~d~----~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~ 207 (368)
T 2nli_A 132 GGPRWFQIYMAKDD----QQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNN 207 (368)
T ss_dssp TCCEEEEECCBSSH----HHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC----
T ss_pred CCCEEEEEeccCCH----HHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHh
Confidence 56788776442222 34678889999999999998854321 00110 000
Q ss_pred -C-CCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 184 -N-RKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 184 -~-~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
. ...+...|+.++.+++.+ ++||+.-| +.++++++.+.+. +|+|.+
T Consensus 208 ~~~~~d~~~~~~~i~~lr~~~-~~PvivK~-v~~~e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 208 IYGASKQKISPRDIEEIAGHS-GLPVFVKG-IQHPEDADMAIKRGASGIWV 256 (368)
T ss_dssp -CTTBCSBCCHHHHHHHHHHS-SSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred hhhccCchhhHHHHHHHHHHc-CCCEEEEc-CCCHHHHHHHHHcCCCEEEE
Confidence 0 013456799999999988 79998765 6899999999888 999988
No 487
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=86.39 E-value=1.9 Score=40.19 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=47.2
Q ss_pred hccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHHHH
Q psy2378 896 LKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDLQQ 951 (956)
Q Consensus 896 ~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i~~ 951 (956)
...+++..++.+..|.+.......++.|++.||+....+ .+.||++|+.+.+.+..
T Consensus 49 ~~~~~t~~~la~~l~~s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~~~~~ 111 (146)
T 2fbh_A 49 HRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEA 111 (146)
T ss_dssp CSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHHHHHHH
Confidence 456789999999999988888889999999999987542 49999999999887644
No 488
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.37 E-value=3.9 Score=43.72 Aligned_cols=124 Identities=17% Similarity=0.058 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEEEeccCCCCCCcHHHH
Q psy2378 73 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 73 ~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~g~~~~~~~~~~ 152 (956)
-|.+.+.+-++.+.+.|+|+|=++.. -|-...-..+.-.++++.+++.++- |.+- .|.. +..++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~eEr~~v~~~~~~~~~g-viaG--vg~~---~t~~a 80 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNGT----------TGLGPSLSPEEKLENLKAVYDVTNK-IIFQ--VGGL---NLDDA 80 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHTTCSC-EEEE--CCCS---CHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHcCC-EEEe--cCCC---CHHHH
Confidence 47788999999999999999988753 2333333555567888988887755 4433 3322 23578
Q ss_pred HHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEE-e-----cCCCCHHHHHH
Q psy2378 153 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDL 221 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~-n-----GgI~s~~da~~ 221 (956)
+++++.++++|+|++-+..-.. .. ......-.++.++|.+.+ ++|||. | |--.+++.+.+
T Consensus 81 i~la~~A~~~Gadavlv~~P~y-----~~---~~s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 81 IRLAKLSKDFDIVGIASYAPYY-----YP---RMSEKHLVKYFKTLCEVS-PHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHHHHHGGGSCCSEEEEECCCS-----CS---SCCHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCC-----CC---CCCHHHHHHHHHHHHhhC-CCCEEEEECchhhCcCCCHHHHHh
Confidence 9999999999999998864321 00 000011245667888887 699863 4 43347887777
No 489
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=86.26 E-value=1.2 Score=47.62 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCEEEEcccc----cccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cC
Q psy2378 153 RDFVGTVSSAGCRTFIVHARN----AFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-ID 227 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~vh~r~----~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad 227 (956)
.+.|+..+++|+++|.+-.+. ...+|. ....+.++++++++.+ +|||++-+++...++++.+.+. ||
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~-------~R~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD 102 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGV-------ARSVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVD 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCC-------CCCCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCc-------ccCCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCC
Confidence 377999999999999986321 011110 1124789999999998 8999998888888888888776 99
Q ss_pred EEEEccccccCCcchHHHHH
Q psy2378 228 GVMLGREAYKNPFLMSNFDL 247 (956)
Q Consensus 228 ~VmiGR~~l~~P~l~~~i~~ 247 (956)
.| -.-..+..|.+.+.+++
T Consensus 103 ~I-d~s~~~~~~~li~~i~~ 121 (297)
T 4adt_A 103 ML-DESEVLTMADEYNHINK 121 (297)
T ss_dssp EE-EEETTSCCSCSSCCCCG
T ss_pred EE-EcCCCCCHHHHHHHHHh
Confidence 99 22222455566666655
No 490
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=86.24 E-value=3.7 Score=46.99 Aligned_cols=123 Identities=11% Similarity=0.120 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHH-HHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccC-ccEEEEeccCCCCCCcHHH
Q psy2378 74 EPKKLAKSAKII-QKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 74 ~~~~~~~aA~~~-~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~g~~~~~~~~~ 151 (956)
+|++.++.++.+ .+.||+.+-|..|.+ +++.-.+.++++|++++ .++.|-.-.+|+ .++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~wt----~~~ 262 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAWS----LDE 262 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBC----HHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCccC----HHH
Confidence 566666655544 566999998865532 34455677889998873 444443333453 456
Q ss_pred HHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh--cCEE
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 229 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~--ad~V 229 (956)
++++++.|++. +.++. ...+.. ....+.+..+++++.. ++||.+.=.+.++.++.++++. +|.+
T Consensus 263 Ai~~~~~le~~-l~wiE---------eP~~~~---d~~~~~e~~a~lr~~~-~iPIa~gE~~~~~~~~~~~i~~~avdi~ 328 (464)
T 4g8t_A 263 AVKIGKQLKGV-LAYAE---------DPCGAE---QGYSGREIMAEFRRAT-GLPTATNMIATDWRQMGHTISLQSVDIP 328 (464)
T ss_dssp HHHHHHHTTTT-CSCEE---------SCBCCB---TTBCHHHHHHHHHHHH-CCCEEESSSSCSHHHHHHHHHHTCCSEE
T ss_pred HHHHHHHhhhc-cceee---------cCcCcc---cccchHHHHHhhhccC-CCCccccccccchhhHHHHHHhhCCCEE
Confidence 88899998765 55541 000000 0012346788899887 7999999999999999999987 7743
No 491
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=86.23 E-value=3.9 Score=44.94 Aligned_cols=141 Identities=6% Similarity=-0.086 Sum_probs=79.3
Q ss_pred HHHHHHHHcCCCEEEec-------CCCCcceeeeCcccccccCC-------hHHHHHHHHHHhhccCccEEEEeccCCCC
Q psy2378 80 KSAKIIQKWGYDEINLN-------CGCPSNRVQNGFFGAILMTK-------PLLVSDCIKAMRDSVEIDITVKHRIGIDD 145 (956)
Q Consensus 80 ~aA~~~~~~G~d~IeiN-------~gCP~~~~~~~~~G~~l~~~-------~~~~~eiv~~v~~~~~~pv~vKir~g~~~ 145 (956)
+..+.+..+||-+|++- -|.|.+...+-. .+++|+ .+...+-++..++..+.||.+-+- |.
T Consensus 62 e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~--~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~-- 136 (354)
T 4ef8_A 62 EELVAMTESASGSLVSKSCTPALREGNPTPRYQALP--LGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GL-- 136 (354)
T ss_dssp HHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEET--TEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CS--
T ss_pred HHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecc--hhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cC--
Confidence 44556667899999993 456666553322 233442 233334344444445788877652 22
Q ss_pred CCcHHHHHHHHHHHH---HcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEec--CCCCHHHHH
Q psy2378 146 INSYDFVRDFVGTVS---SAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING--GIKTKKEID 220 (956)
Q Consensus 146 ~~~~~~~~~~a~~l~---~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nG--gI~s~~da~ 220 (956)
+.++..+.++.++ +.|+|+|.+........| +..-...+..-.+.++.+++.+ ++||+.=- ++ +.+++.
T Consensus 137 --~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~g--g~~l~~~~e~~~~il~av~~~~-~~PV~vKi~p~~-d~~~~~ 210 (354)
T 4ef8_A 137 --SMRENVEMCKRLAAVATEKGVILELNLSCPNVPG--KPQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYF-DFAHFD 210 (354)
T ss_dssp --SHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTT--SCCGGGSHHHHHHHHHHHHHHC-CSCEEEEECCCC-SHHHHH
T ss_pred --CHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCC--chhhccCHHHHHHHHHHHHHhh-CCCeEEEecCCC-CHHHHH
Confidence 2356788999998 679999998755432222 1111111122346677788877 78987432 33 454444
Q ss_pred HHhh---h---cCEEEE
Q psy2378 221 LHLN---Y---IDGVML 231 (956)
Q Consensus 221 ~~l~---~---ad~Vmi 231 (956)
++.+ . +|+|.+
T Consensus 211 ~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 211 AAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHhCCCccEEEE
Confidence 4432 2 777764
No 492
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=86.17 E-value=1.1 Score=48.53 Aligned_cols=79 Identities=13% Similarity=-0.012 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHHH
Q psy2378 74 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFV 152 (956)
Q Consensus 74 ~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~~ 152 (956)
+++...+.|+...+.|+|.||||+-+--+ |-.-+.....+.+..+|+++++.+ ++|++|-..-
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrP-----G~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~----------- 126 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGP-----GERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWR----------- 126 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC---------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSC-----------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-----CCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCC-----------
Confidence 34566677777788999999999754111 111122334566777789998877 8999886432
Q ss_pred HHHHHHHHHcCCCEEE
Q psy2378 153 RDFVGTVSSAGCRTFI 168 (956)
Q Consensus 153 ~~~a~~l~~~G~~~i~ 168 (956)
.+++++..++|++.|.
T Consensus 127 ~~VaeaAl~aGa~iIN 142 (318)
T 2vp8_A 127 AQVAKAACAAGADLIN 142 (318)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhCCCEEE
Confidence 2667777788999885
No 493
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=86.15 E-value=4.3 Score=44.49 Aligned_cols=93 Identities=19% Similarity=0.234 Sum_probs=61.5
Q ss_pred ccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEccccc--------ccccCC--------------------C-CC
Q psy2378 133 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------FLKKLN--------------------P-KQ 183 (956)
Q Consensus 133 ~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~--------~~~g~~--------------------~-~~ 183 (956)
-|.+..+-..-|. +.+.++.++++++|+.+|.++-=+. ...|++ + ..
T Consensus 122 ~~~wfQlY~~~d~----~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T 3sgz_A 122 GFRWFQLYMKSDW----DFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPV 197 (352)
T ss_dssp CEEEEECCCCSCH----HHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC--------------
T ss_pred ccceeccccCCCH----HHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhh
Confidence 4666665543222 3467888889999988887752110 000100 0 00
Q ss_pred CCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHhhh-cCEEEE
Q psy2378 184 NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 231 (956)
Q Consensus 184 ~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l~~-ad~Vmi 231 (956)
....+...|+.++.+++.. ++||+.-| +.++++|+.+.+. +|+|.+
T Consensus 198 ~~~d~~~~w~~i~~lr~~~-~~PvivK~-v~~~e~A~~a~~~GaD~I~v 244 (352)
T 3sgz_A 198 LFPKASFCWNDLSLLQSIT-RLPIILKG-ILTKEDAELAMKHNVQGIVV 244 (352)
T ss_dssp -CCCTTCCHHHHHHHHHHC-CSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred hccCCCCCHHHHHHHHHhc-CCCEEEEe-cCcHHHHHHHHHcCCCEEEE
Confidence 1223567899999999988 79998665 5789999999988 999987
No 494
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=86.15 E-value=1.9 Score=38.59 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=43.9
Q ss_pred ccCCChhhHHHHh-CCCHHHHHHHHHHHHHCCCeEEcCC-------EEeeCchhhchHHHH
Q psy2378 897 KDGFSPNLFFERT-GINIKIIESKLKNAEKLGLLKRNNK-------NIKPTSFGRYFLNDL 949 (956)
Q Consensus 897 ~~gi~~~~~~~~~-g~~~~~~~~~l~~l~~~Gl~~~~~~-------~~~lT~~G~~~~~~i 949 (956)
..+.+..++.+.. |.+...+-..|+.|++.||++...+ .+.||++|+-+.+.+
T Consensus 25 ~~~~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l~~~~ 85 (107)
T 2hzt_A 25 HGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEGIL 85 (107)
T ss_dssp TCCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGHHHH
T ss_pred hCCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECccHHHHHHHH
Confidence 4458889999998 8888888889999999999976432 589999999887654
No 495
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=86.11 E-value=1.5 Score=40.66 Aligned_cols=55 Identities=25% Similarity=0.278 Sum_probs=46.4
Q ss_pred cCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 898 DGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 898 ~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
.+++..++.+..+.+....-..++.|++.||+++.. -.+.||++|+-+.+.+...
T Consensus 46 ~~~t~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~D~R~~~~~LT~~G~~~~~~~~~~ 107 (139)
T 3eco_A 46 DGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSI 107 (139)
T ss_dssp TCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC--CCEEEEECHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCCCCCCeeeeEECHHHHHHHHHHHHH
Confidence 378899999999998888888999999999998642 3589999999999876544
No 496
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=86.10 E-value=1.8 Score=41.00 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=48.9
Q ss_pred HhhhhccCCChhhHHHHhCCCHHHHHHHHHHHHHCCCeEEcC-------CEEeeCchhhchHHHHHHH
Q psy2378 892 NALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNN-------KNIKPTSFGRYFLNDLQQI 952 (956)
Q Consensus 892 ~~lr~~~gi~~~~~~~~~g~~~~~~~~~l~~l~~~Gl~~~~~-------~~~~lT~~G~~~~~~i~~~ 952 (956)
..|....+++..++.+..|.+.......++.|++.||++... -.+.||++|+.+.+.+...
T Consensus 50 ~~l~~~~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~~~~~~ 117 (155)
T 3cdh_A 50 ACLVDNDAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALAESLVAS 117 (155)
T ss_dssp HHHSSCSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHHHHHHHH
T ss_pred HHHHHCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHHHHHHHH
Confidence 334445678899999999988877888999999999998753 2389999999998876543
No 497
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=86.08 E-value=6.1 Score=42.87 Aligned_cols=84 Identities=10% Similarity=0.167 Sum_probs=64.1
Q ss_pred CCCCEEEEecCC----CHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhccCccEEE
Q psy2378 62 EEHPIAFQVGDN----EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITV 137 (956)
Q Consensus 62 ~~~p~~vQl~g~----~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v 137 (956)
.+.|+.||=..+ |.+..++-++.+.++|+|.|++ ++| + ....+.++.+++.+++|+.+
T Consensus 28 G~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRv--avp---------------~-~~~a~al~~I~~~~~vPlva 89 (366)
T 3noy_A 28 GDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRV--AVP---------------H-KEDVEALEEIVKKSPMPVIA 89 (366)
T ss_dssp TTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEE--ECC---------------S-HHHHHHHHHHHHHCSSCEEE
T ss_pred CCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEe--CCC---------------C-hHHHHHHHHHHhcCCCCEEE
Confidence 578999998754 5677777778888999999999 344 1 22357789999999999988
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccc
Q psy2378 138 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARN 173 (956)
Q Consensus 138 Kir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~ 173 (956)
-+-.. -.+|....++|+|.+-+.++.
T Consensus 90 DiHf~----------~~lal~a~e~G~dklRINPGN 115 (366)
T 3noy_A 90 DIHFA----------PSYAFLSMEKGVHGIRINPGN 115 (366)
T ss_dssp ECCSC----------HHHHHHHHHTTCSEEEECHHH
T ss_pred eCCCC----------HHHHHHHHHhCCCeEEECCcc
Confidence 76542 145666788999999998765
No 498
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=86.07 E-value=2.1 Score=43.25 Aligned_cols=81 Identities=12% Similarity=0.071 Sum_probs=58.4
Q ss_pred CccEEEEeccCCCCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCce-EEEe
Q psy2378 132 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELE-IIIN 210 (956)
Q Consensus 132 ~~pv~vKir~g~~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ip-Vi~n 210 (956)
..|+..-++.. +.++..+.++.+.+.|+++|++...+ +...+.++++++.+ ++| +++.
T Consensus 6 ~~~i~~~i~~~-----d~~~~~~~~~~~~~~G~~~i~l~~~~---------------~~~~~~i~~i~~~~-~~~l~vg~ 64 (212)
T 2v82_A 6 KLPLIAILRGI-----TPDEALAHVGAVIDAGFDAVEIPLNS---------------PQWEQSIPAIVDAY-GDKALIGA 64 (212)
T ss_dssp SSCEEEECTTC-----CHHHHHHHHHHHHHHTCCEEEEETTS---------------TTHHHHHHHHHHHH-TTTSEEEE
T ss_pred CCCEEEEEeCC-----CHHHHHHHHHHHHHCCCCEEEEeCCC---------------hhHHHHHHHHHHhC-CCCeEEEe
Confidence 44555545431 23467889999999999999985433 12456778887766 455 4577
Q ss_pred cCCCCHHHHHHHhhh-cCEEEEcc
Q psy2378 211 GGIKTKKEIDLHLNY-IDGVMLGR 233 (956)
Q Consensus 211 GgI~s~~da~~~l~~-ad~VmiGR 233 (956)
|.+.+.++++.+++. ||+|.+|.
T Consensus 65 g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 65 GTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp ECCCSHHHHHHHHHTTCCEEECSS
T ss_pred ccccCHHHHHHHHHcCCCEEEeCC
Confidence 899999999999888 99998654
No 499
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=86.01 E-value=2.6 Score=46.16 Aligned_cols=120 Identities=10% Similarity=0.064 Sum_probs=78.2
Q ss_pred CEEEEecCCCHHHHHHHHHHHHHcCCCEEEecCCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCC
Q psy2378 65 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGI 143 (956)
Q Consensus 65 p~~vQl~g~~~~~~~~aA~~~~~~G~d~IeiN~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~ 143 (956)
|+-..+.|.+++++ +.+.+.||..+-+..| ++ -.+.+++||+++ +.++.+-.-.+|
T Consensus 121 ~~~~~~~g~~~e~~----~~~~~~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~ 177 (342)
T 2okt_A 121 AYGATASGLSNKQL----ESLKATKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESL 177 (342)
T ss_dssp ECEEEESSCCHHHH----HHHHHHCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCC
T ss_pred eeeEEEecCCHHHH----HHHHHcCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCC
Confidence 34444425444555 4445679999998654 23 357889999887 233333333355
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEcccccccccCCCCCCCCCCcCcHHHHHHHHHhCCCceEEEecCCCCHHHHHHHh
Q psy2378 144 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL 223 (956)
Q Consensus 144 ~~~~~~~~~~~~a~~l~~~G~~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~v~~~~~~ipVi~nGgI~s~~da~~~l 223 (956)
+. +++ ++++.|++.++.+|. +. .++.+++..++ +.. ++||.+-=.+.+..++.+++
T Consensus 178 ~~----~~A-~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~--~~~-~ipIa~dEs~~~~~~~~~~i 233 (342)
T 2okt_A 178 DR----QDF-TQLQLLAREQVLYIE---------------EP-FKDISMLDEVA--DGT-IPPIALDEKATSLLDIINLI 233 (342)
T ss_dssp CG----GGH-HHHHHHGGGCEEEEE---------------CC-CSSGGGGGGSC--TTS-SCCEEESTTCCCHHHHHHHH
T ss_pred CH----HHH-HHHHHHhhCCCcEEE---------------CC-CCCccHHHHHH--hcC-CCCEEecCCCCCHHHHHHHH
Confidence 43 457 999999998877772 11 11234444444 344 69999888999999999998
Q ss_pred hh--cCEEEE
Q psy2378 224 NY--IDGVML 231 (956)
Q Consensus 224 ~~--ad~Vmi 231 (956)
+. +|.|.+
T Consensus 234 ~~~a~d~i~~ 243 (342)
T 2okt_A 234 ELYNVKVVVL 243 (342)
T ss_dssp HHSCCCEEEE
T ss_pred HhCCCCEEEE
Confidence 76 998886
No 500
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.00 E-value=7.8 Score=41.44 Aligned_cols=150 Identities=10% Similarity=0.085 Sum_probs=87.8
Q ss_pred HHHHHHHcCCCEEEec--------CCCCcceeeeCcccccccCChHHHHHHHHHHhhcc-CccEEEEeccCCCCCCcHHH
Q psy2378 81 SAKIIQKWGYDEINLN--------CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDF 151 (956)
Q Consensus 81 aA~~~~~~G~d~IeiN--------~gCP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~g~~~~~~~~~ 151 (956)
.|+.++++|||+|=+- .|-| |. ..-..+.+..-++.|.+.. ++||++-+..|+.+ .++
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~p------D~----~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~---~~~ 96 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQA------DL----GICTLNDMRANAEMISNISPSTPVIADADTGYGG---PIM 96 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCC------SS----SCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSS---HHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCC------CC----CcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCC---HHH
Confidence 5667788999998772 1223 11 1223455566677777764 89999999999753 245
Q ss_pred HHHHHHHHHHcCCCEEEEcccccc-cccCCCCCCCCCCcCcH-HHHHHHHHhC---C--CceEEEecCCCCH-----HHH
Q psy2378 152 VRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPILKY-NFVYNLKKDF---P--ELEIIINGGIKTK-----KEI 219 (956)
Q Consensus 152 ~~~~a~~l~~~G~~~i~vh~r~~~-~~g~~~~~~~~~~~~~~-~~i~~v~~~~---~--~ipVi~nGgI~s~-----~da 219 (956)
..+.++.++++|++++++-..... ..|+.+. . .-... +.+.+|+... . +.+++.|.+.... +++
T Consensus 97 v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~g--k--~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeA 172 (302)
T 3fa4_A 97 VARTTEQYSRSGVAAFHIEDQVQTKRCGHLAG--K--ILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEES 172 (302)
T ss_dssp HHHHHHHHHHTTCCEEEECSBCCC-------C--C--CBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHH
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCcccCCCCC--C--eecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHH
Confidence 778899999999999999765421 0111110 0 11222 3334443221 0 2355666655543 333
Q ss_pred H----HHhhh-cCEEEEccccccCCcchHHHHHhh
Q psy2378 220 D----LHLNY-IDGVMLGREAYKNPFLMSNFDLNY 249 (956)
Q Consensus 220 ~----~~l~~-ad~VmiGR~~l~~P~l~~~i~~~~ 249 (956)
. .+.+. ||+|++= .+.+|.-+.++.+.+
T Consensus 173 i~Ra~ay~eAGAD~ifi~--g~~~~~ei~~~~~~~ 205 (302)
T 3fa4_A 173 VARLRAARDAGADVGFLE--GITSREMARQVIQDL 205 (302)
T ss_dssp HHHHHHHHTTTCSEEEET--TCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEeec--CCCCHHHHHHHHHHh
Confidence 2 23333 9999982 357777777776654
Done!