BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy2379
         (585 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|421485557|ref|ZP_15933113.1| cytochrome ubiquinol oxidase subunit I [Achromobacter piechaudii
           HLE]
 gi|400196107|gb|EJO29087.1| cytochrome ubiquinol oxidase subunit I [Achromobacter piechaudii
           HLE]
          Length = 667

 Score =  960 bits (2481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/585 (76%), Positives = 522/585 (89%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 78  MLLRGFADAIMMRLQQAVAFGDSTGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GG +LVM+SLF+GEFA TGWL YPPLSGI QSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGVVLVMMSLFVGEFARTGWLAYPPLSGIMQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM +M MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTMMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTF S
Sbjct: 258 AVLALLSMDRYVGTNFFTADFGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFCS 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTMGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFYVAFMPLY+LG MGVTRR++HFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYVAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQ+AAFG LLIA GI SFIIQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQVAAFGALLIACGIASFIIQLVVSYRRRDQLRDNTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ ++ P+  F  I MPKNT  G++++  S++MGFAL+W
Sbjct: 558 PNYNFAFTPRVHDLDAWWQMKQHGYQRPQQGFIPIHMPKNTWAGVVLAAISVVMGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L ++SF+  +++ I +TFNYKR+YY+ ++E+   E  R RL
Sbjct: 618 HMWPLAVLSFVALILVSIVHTFNYKRDYYVPADEVVREEATRTRL 662


>gi|423013820|ref|ZP_17004541.1| cytochrome ubiquinol oxidase subunit I [Achromobacter xylosoxidans
           AXX-A]
 gi|338783314|gb|EGP47682.1| cytochrome ubiquinol oxidase subunit I [Achromobacter xylosoxidans
           AXX-A]
          Length = 667

 Score =  957 bits (2475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/585 (76%), Positives = 520/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADAIMMRLQQAVAFGDSTGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GG +LVM+SLF+GEFA TGWL YPPLSGIAQSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGVVLVMMSLFVGEFARTGWLAYPPLSGIAQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMSLMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 AVLALLSMDRYVGTNFFTADFGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTMGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFY AFMPLY+LG MGVTRR++HFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYFAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQ+AAFG  LIA+GI  F+IQL+VSYR+R +L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQVAAFGAFLIAIGIACFLIQLVVSYRRRESLRDDSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ ++ P+D F  I MPKNT  GI+++  S++MGFAL+W
Sbjct: 558 PNYNFAFTPRVHDQDAWWQMKQHGYQRPQDGFIPIHMPKNTWAGIVLAAISVVMGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L ++SF   +I+ I +TFNYKR YY+ ++E+   E  R +L
Sbjct: 618 HMWPLAVLSFAALVIVSIVHTFNYKREYYVPADEVVRTEDARTQL 662


>gi|311108524|ref|YP_003981377.1| cytochrome o ubiquinol oxidase subunit I 2 [Achromobacter
           xylosoxidans A8]
 gi|310763213|gb|ADP18662.1| cytochrome o ubiquinol oxidase, subunit I 2 [Achromobacter
           xylosoxidans A8]
          Length = 667

 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/585 (76%), Positives = 520/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 78  MLLRGFADAIMMRLQQAVAFGDSAGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GG ILVM+SLF+GEFA TGWL YPPLSGI QSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGVILVMMSLFVGEFARTGWLAYPPLSGIMQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM +M MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTMMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTF  
Sbjct: 258 AVLALLSMDRYVGTNFFTADFGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGRIRFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFYVAFMPLY+LG MGVTRR++HFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYVAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQ+AAFG LLIA GI SF+IQL+VSYR+R +L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQVAAFGALLIACGIASFLIQLVVSYRRRESLRDTTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ +  P+  F  I MPKNT  GI+++  S++MGFAL+W
Sbjct: 558 PNYNFAFTPRVHDQDAWWQMKQHGYLRPQQGFIPIHMPKNTWAGIVLAGISVVMGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L ++SF   +++ I +TFNYKR+YY+ ++E+   E  R RL
Sbjct: 618 HMWPLAVLSFAALILVSIVHTFNYKRDYYVPADEVVRAEDARTRL 662


>gi|359800079|ref|ZP_09302630.1| cytochrome ubiquinol oxidase subunit I [Achromobacter
           arsenitoxydans SY8]
 gi|359361877|gb|EHK63623.1| cytochrome ubiquinol oxidase subunit I [Achromobacter
           arsenitoxydans SY8]
          Length = 667

 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/585 (76%), Positives = 519/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 78  MLLRGFADAIMMRLQQAVAFGDSAGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GG +LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGVVLVMMSLFVGEFARTGWLAYPPLSGITHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSGIN++ TI+KMRAPGM +M MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGINLLVTIVKMRAPGMTMMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVST+  
Sbjct: 258 AVLALLSMDRYVGTNFFTADFGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTYCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEIPMLWTIGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFYVAFMPLY+LG MGVTRR++HFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYVAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQIAAFG LLIA GI SFIIQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQIAAFGALLIACGIASFIIQLVVSYRRRDQLRDTTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ ++ P+  F  I MP NT  GI+++  S++MGFAL+W
Sbjct: 558 PAYNFAFTPRVHDLDAWWQMKQHGYERPRLGFIPIHMPSNTWAGIVLAGISVVMGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW LT++SF   +++ I +TFNYKR+YY+ +E++   E  R RL
Sbjct: 618 HMWPLTVLSFAALILVSIIHTFNYKRDYYVPAEQVVATEDARTRL 662


>gi|422321224|ref|ZP_16402273.1| cytochrome ubiquinol oxidase subunit I [Achromobacter xylosoxidans
           C54]
 gi|317403928|gb|EFV84397.1| cytochrome ubiquinol oxidase subunit I [Achromobacter xylosoxidans
           C54]
          Length = 667

 Score =  952 bits (2460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/585 (75%), Positives = 517/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADAIMMRLQQAVAFGDSTGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GG +LVM+SLF+GEFA TGWL YPPLSGIA SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGVVLVMMSLFVGEFARTGWLAYPPLSGIAHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMSLMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 AVLALLSMDRYVGTNFFTADFGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFY AFMPLY+LG MGVTRR++HFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYFAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQ+AAFG  LIA+GI  F+IQL+VSYR+R +L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQVAAFGAFLIAIGIACFLIQLVVSYRRRESLRDFSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P IH  D+WW MK++ ++ P+  F  I MPKNT  GI+++  S++MGFAL+W
Sbjct: 558 PNYNFAFTPRIHDQDAWWQMKQHGYQRPQAGFIPIHMPKNTWAGIVLAAISVVMGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L ++SF   +I+ I +TFNYKR YY+ ++E+   E  R  L
Sbjct: 618 HMWPLAVLSFAALIIVSIVHTFNYKREYYVPADEVVRTEDARTHL 662


>gi|407801805|ref|ZP_11148648.1| cytochrome o ubiquinol oxidase subunit I 2 [Alcanivorax sp. W11-5]
 gi|407024122|gb|EKE35866.1| cytochrome o ubiquinol oxidase subunit I 2 [Alcanivorax sp. W11-5]
          Length = 667

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/585 (75%), Positives = 521/585 (89%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+F  S GYLPPEHY+QIFTAHGVIMIFFVAMP+VTG++N++V
Sbjct: 78  MLLRGFADAIMMRIQQAIAFDGSMGYLPPEHYDQIFTAHGVIMIFFVAMPMVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+L+M+SLF+GEFA TGWL YPPLSGI QSPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTSGAVLLMVSLFVGEFAKTGWLAYPPLSGILQSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSGIN++ TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGINLLVTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+GT FFTNDLGGN MMY+NLIWIWGHPEVYIL+LP+FG+FSEVVST+S 
Sbjct: 258 AVLGMLTLDRYLGTAFFTNDLGGNAMMYINLIWIWGHPEVYILILPLFGVFSEVVSTYSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+FEVP+LWT+GF+ITFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIQFEVPMLWTMGFIITFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFGYKL+PFWGK SFW WL+GF++AFMPLY+LG MGVTRRMSHF+
Sbjct: 438 VLFGLFAGITYWFPKAFGYKLDPFWGKVSFWCWLVGFWLAFMPLYVLGLMGVTRRMSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG  LIA+GI +F+ Q +VSYR+R +L D TGDPWNGRTLEWSTSSPP
Sbjct: 498 DSSLQIWFQIAAFGAFLIAIGIAAFLFQFVVSYRRRESLRDTTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ F+ P+  F  + MPKNT  GI+++  S ++GFAL+W
Sbjct: 558 PAYNFAFTPQVHDIDAWWQMKQHGFQRPQSGFLPVHMPKNTGAGIILAGISTLLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWLL   SF+  L + I +TFNYKR+YYI +EE+T +E +R R+
Sbjct: 618 HMWLLAGASFVALLAVTIGHTFNYKRDYYIPAEEVTRVESERTRM 662


>gi|124266933|ref|YP_001020937.1| cytochrome-c oxidase [Methylibium petroleiphilum PM1]
 gi|124259708|gb|ABM94702.1| Cytochrome-c oxidase [Methylibium petroleiphilum PM1]
          Length = 668

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/585 (76%), Positives = 519/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADALMMRAQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA L+M+SLF+GEFA TGWL YPPLSGIA SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGAGLLMVSLFVGEFAKTGWLAYPPLSGIAFSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N+IATI+KMRAPGM LM MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGVNLIATIVKMRAPGMTLMKMPVFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL++GI YW+PKAFGYKL+PFWGKCSFWFWL GFY+AFMPLY+LG MGVTRR+SHFE
Sbjct: 438 VLFGLLAGITYWYPKAFGYKLDPFWGKCSFWFWLSGFYLAFMPLYVLGLMGVTRRVSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG +LIA+GI  F+IQL+VS+R+RH L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DSSLQIWFQIAAFGAVLIALGIACFLIQLVVSFRRRHALRDTTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+W  MK   +  P + +  I MPKNT  G +IS  + +  FALVW
Sbjct: 558 PAYNFAFTPIVHDNDAWHDMKSRGYARPLNGYTAIHMPKNTGAGFVISAIAAVCAFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWLL  ++F + ++ VI +TFNY R+++I ++E+T +E  R RL
Sbjct: 618 HMWLLAGVAFAVLMVAVIVHTFNYHRDFHIPADEVTRVEGARTRL 662


>gi|293607335|ref|ZP_06689674.1| cytochrome o ubiquinol oxidase subunit I [Achromobacter piechaudii
           ATCC 43553]
 gi|292814179|gb|EFF73321.1| cytochrome o ubiquinol oxidase subunit I [Achromobacter piechaudii
           ATCC 43553]
          Length = 667

 Score =  946 bits (2445), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/585 (76%), Positives = 517/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 78  MLLRGFADAIMMRLQQAVAFGDSTGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GG ILVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGVILVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM +M MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTMMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 AVLALLSMDRYVGTNFFTADFGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYIAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQIAAFG LLIA GI SFIIQL+VSYR+R  L D TGDPW GRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQIAAFGALLIACGIGSFIIQLVVSYRRRDQLRDETGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ ++ P+  F  I MPKNT  GI+++  S+++GFAL+W
Sbjct: 558 PNYNFAFTPRVHDLDAWWQMKQHGYERPQQGFIPIHMPKNTWAGIVLAGISVVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   +++ I +TFNYKR+YY+ + E+   E  R RL
Sbjct: 618 HMWPLVVLAFAALILVSIIHTFNYKRDYYVPATEVVREEDARTRL 662


>gi|374371718|ref|ZP_09629650.1| cytochrome o ubiquinol oxidase subunit I 2 [Cupriavidus basilensis
           OR16]
 gi|373096745|gb|EHP37934.1| cytochrome o ubiquinol oxidase subunit I 2 [Cupriavidus basilensis
           OR16]
          Length = 667

 Score =  946 bits (2444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/585 (76%), Positives = 520/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMRLQQ++SFG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADAAMMRLQQSVSFGDSLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT GGA+LVM+SLF+GEFA TGWL YPPLSG+ QSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVGGAVLVMMSLFVGEFARTGWLAYPPLSGVLQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GTLLSGIN++ TI+KMRAPGM +M MP+FTWTALCTN+LI+AAFPVLT
Sbjct: 198 DYYIWSLQVAGLGTLLSGINLLVTIVKMRAPGMTMMKMPVFTWTALCTNVLIIAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L  LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVVSTF  
Sbjct: 258 AVLALLALDRYAGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSEVVSTFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFEVP+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFYVAFMPLY+LG MGVTRRMSHFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYVAFMPLYVLGLMGVTRRMSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ+AAFG  LIA+GI  F+IQL+VSYR+R  L D TGDPW+ RTLEWSTSSPP
Sbjct: 498 DASLQIWFQLAAFGAFLIALGIGCFLIQLVVSYRRREFLRDTTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MK+++++ P+  F  I MPKNT+ GI+++  S ++GFAL+W
Sbjct: 558 PPYNFAFTPIIHDNDAWWQMKEHHYQRPQQGFIPIHMPKNTSAGIILAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL+ I+SF   L++ I +TFNYKR++YI ++++   E +R RL
Sbjct: 618 HMWLVVIVSFAAILVVAIGHTFNYKRDHYIPADDVVRTEAERTRL 662


>gi|421747862|ref|ZP_16185527.1| cytochrome o ubiquinol oxidase subunit I 2 [Cupriavidus necator
           HPC(L)]
 gi|409773475|gb|EKN55267.1| cytochrome o ubiquinol oxidase subunit I 2 [Cupriavidus necator
           HPC(L)]
          Length = 667

 Score =  943 bits (2438), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/585 (75%), Positives = 515/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADAIMMRLQQAIAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI QSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTAGAVLVMVSLFVGEFAKTGWLAYPPLSGILQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAGIGTLLSG+N++ TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGIGTLLSGVNLLVTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTF  
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYWFPKAFG+KL+ FWGK SFWFWLIGFY AFMPLY+LG MGVTRR+SHF 
Sbjct: 438 VLFGLFAGINYWFPKAFGFKLDEFWGKVSFWFWLIGFYAAFMPLYVLGLMGVTRRVSHFT 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ+AA G  LIA+GI +F+IQL VS+++R  L D+TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQVAAVGAFLIAIGIAAFVIQLAVSFKRRAQLRDVTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK   ++ P+  F  I MPKNT  GI+++  S ++GFAL+W
Sbjct: 558 PAYNFAFTPVVHDNDAWWQMKDRGYERPQKGFLPIHMPKNTGAGIILAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL   +SF+  L + I +TFNY+R+YYI ++ +   E++R RL
Sbjct: 618 HMWLPAAVSFVALLAVAIGHTFNYQRDYYIPADHVVRTEEERTRL 662


>gi|319795346|ref|YP_004156986.1| cytochrome o ubiquinol oxidase subunit i [Variovorax paradoxus EPS]
 gi|315597809|gb|ADU38875.1| cytochrome o ubiquinol oxidase, subunit I [Variovorax paradoxus
           EPS]
          Length = 676

 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/585 (76%), Positives = 516/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA +FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 80  MLLRGFADAIMMRAQQAFAFGDNAGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 140 PLQIGARDVAFPFLNNFSFWMTTFGAGLVMASLFVGEFAKTGWLAYPPLSGILFSPDVGV 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N++ATI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 200 DYYIWSLQIAGVGTLLSGVNLLATIVKMRAPGMTMMKMPVFTWTALCTNVLIVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTFS 
Sbjct: 260 AVLALLSLDRYVGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFSG 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 320 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 380 FTMYRGRIRYELPMMWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+++GI YWFPKAFGYKL+PFWGKCSFWFW+IGF+ AFMPLYILG MGVTRRMSHF+
Sbjct: 440 VLFGMLAGITYWFPKAFGYKLDPFWGKCSFWFWIIGFWFAFMPLYILGLMGVTRRMSHFQ 499

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQIAAFG +LIA+GI SFIIQL+VSY +R +L D TGDPWNGRTLEWSTSSPP
Sbjct: 500 DMSLQIWFQIAAFGAVLIALGIASFIIQLVVSYIRRDSLRDTTGDPWNGRTLEWSTSSPP 559

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P IH +D+W  MK+  ++ P + F  I MPKNT+ G +I+  + + GFAL+W
Sbjct: 560 PAYNFAFTPRIHDNDAWTDMKRRGYERPLEGFTPIHMPKNTSAGFIIAALAAVCGFALIW 619

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWL+  I F+  L  VI +TFNYKR+YYI +E++   E +R RL
Sbjct: 620 QMWLVAGIGFVAMLAAVIIHTFNYKRDYYIPAEDVVRTEGERTRL 664


>gi|239817017|ref|YP_002945927.1| cytochrome o ubiquinol oxidase subunit I [Variovorax paradoxus
           S110]
 gi|239803594|gb|ACS20661.1| cytochrome o ubiquinol oxidase, subunit I [Variovorax paradoxus
           S110]
          Length = 670

 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/585 (76%), Positives = 515/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 80  MLLRGFSDAIMMRAQQAVAFGDNAGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA LVM SLF+GEFA TGWL YPPLSG+  SP VGV
Sbjct: 140 PLQIGARDVAFPFLNNFSFWMTTFGAGLVMASLFVGEFAKTGWLAYPPLSGLLFSPDVGV 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N++ATI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 200 DYYIWSLQIAGVGTLLSGVNLLATIVKMRAPGMTMMKMPVFTWTALCTNVLIVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTFS 
Sbjct: 260 AVLALLSLDRYVGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFSG 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 320 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 380 FTMYRGRIRFELPMMWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+++GI YWFPKAFGYKL+PFWGKCSFWFWL+GF+ AFMPLYILG MGVTRRMSHF+
Sbjct: 440 VLFGMLAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFWFAFMPLYILGLMGVTRRMSHFQ 499

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQ+AAFG +LIA+GI SFIIQL+VSY +R +L D TGDPWNGRTLEWSTSSPP
Sbjct: 500 DMSLQIWFQVAAFGAVLIALGIASFIIQLVVSYIRRDSLRDTTGDPWNGRTLEWSTSSPP 559

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P IH +D+W  MK+  +  P D F  I MPKNT  G +I+  +   GFAL+W
Sbjct: 560 PAYNFAFTPRIHDNDAWTDMKRRGYSRPVDGFTPIHMPKNTAAGFIIAALAGTCGFALIW 619

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWL+  ++F   L  VI +TFNYKR+Y+I +EE+   E +R RL
Sbjct: 620 QMWLVAGVAFFAMLAAVIIHTFNYKRDYHIPAEEVVRTEDERTRL 664


>gi|152980480|ref|YP_001354329.1| cytochrome o ubiquinol oxidase subunit I [Janthinobacterium sp.
           Marseille]
 gi|151280557|gb|ABR88967.1| cytochrome o ubiquinol oxidase subunit I [Janthinobacterium sp.
           Marseille]
          Length = 667

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/585 (75%), Positives = 515/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLMRGFADALMMRAQQAIAFGDNPGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGAVLVMASLFVGEFAKTGWLAYPPLSGILASPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGVNLIVTIVKMRAPGMDMMKMPVFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDR + T+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTFS+
Sbjct: 258 AVLGMLTLDRVLDTNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFSA 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYWFPKAFGYKL+ FWGKCSFWFW++GF++AFMPLYILG MGVTRRMS F+
Sbjct: 438 VLFGLFAGINYWFPKAFGYKLDVFWGKCSFWFWIVGFWMAFMPLYILGLMGVTRRMSQFQ 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ+AAFG +LIA+GI S +IQ  VS+R+RH L D+TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQVAAFGAVLIALGIASMLIQFYVSFRRRHELRDVTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H +D+W  MKKN +K P + F  I MPKNT  G +IS  S  +GF L+W
Sbjct: 558 PDYNFAFTPKVHDNDTWADMKKNGYKRPLEGFTAIHMPKNTGAGFIISAISAAIGFCLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWLL  +SF++ L ++I +TFNYKR+YYI +EE+   E  R RL
Sbjct: 618 QMWLLAGVSFVVLLAVIIIHTFNYKRDYYIPAEEVARTENLRTRL 662


>gi|398812846|ref|ZP_10571559.1| cytochrome o ubiquinol oxidase, subunit I [Variovorax sp. CF313]
 gi|398076370|gb|EJL67433.1| cytochrome o ubiquinol oxidase, subunit I [Variovorax sp. CF313]
          Length = 667

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/585 (75%), Positives = 512/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG + G+LPP HY+Q+FTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADALMMRAQQAMAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGAGLVMASLFVGEFAKTGWLAYPPLSGILFSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N++ATI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGVNLLATIVKMRAPGMTMMKMPVFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTFS 
Sbjct: 258 AVLALLSLDRYAGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+++GI YWFPKAFGYKL+PFWGKCSFWFW++GF+ AFMPLYILG MGVTRRM+HF+
Sbjct: 438 VLFGMLAGITYWFPKAFGYKLDPFWGKCSFWFWIVGFWFAFMPLYILGLMGVTRRMNHFQ 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQ+AAFG +LIA+GI SFIIQL+VSY +R +L D TGDPWNGRTLEWSTSSPP
Sbjct: 498 DMSLQIWFQVAAFGAVLIALGIGSFIIQLVVSYIRRESLRDTTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P IH +D+W  MK   ++ P + F  I MPKNT  G +I+  + + GFAL+W
Sbjct: 558 PAYNFAFTPRIHDNDAWSDMKARGYERPVEGFSPIHMPKNTAAGFIIAALAALCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWL+  I F   L  VI +TFNYKR+Y+I ++E+   E  R RL
Sbjct: 618 QMWLVAGIGFFSMLAAVIIHTFNYKRDYHIPADEVVRTEDARTRL 662


>gi|340787392|ref|YP_004752857.1| cytochrome O ubiquinol oxidase subunit I [Collimonas fungivorans
           Ter331]
 gi|340552659|gb|AEK62034.1| Cytochrome O ubiquinol oxidase subunit I [Collimonas fungivorans
           Ter331]
          Length = 682

 Score =  932 bits (2408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/585 (75%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA +FG S G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 93  MLLRGFADALMMRAQQAFAFGDSAGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 152

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ G +LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 153 PLQIGARDVAFPFLNNFSFWMTTFGGMLVMASLFVGEFARTGWLAYPPLSGILASPDVGV 212

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSGIN+IATI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 213 DYYIWALQIAGVGTLLSGINLIATIVKMRAPGMNMMKMPVFTWTALCTNVLIVAAFPVLT 272

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR +GT+FFTND+GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTFSS
Sbjct: 273 AVLGMLSLDRIVGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFSS 332

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 333 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 392

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 393 FTMYRGRIRFELPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 452

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +GINYWFPKAFGYKL+ FWGKC FWFW IGFY+AFMPLY+LG MGVTRR+ HFE
Sbjct: 453 VLFGMFAGINYWFPKAFGYKLDDFWGKCCFWFWTIGFYIAFMPLYVLGLMGVTRRLGHFE 512

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG +LIA+GI SFI+QL+VS+R+R +L D TGDPW  RTLEWSTSSPP
Sbjct: 513 DPSLQIWFQIAAFGAVLIALGIASFIVQLVVSFRRRESLRDTTGDPWGARTLEWSTSSPP 572

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+W  MK N +  P   F  I MPKNT  G +I+  S  +GFAL+W
Sbjct: 573 PDYNFAFTPVVHDNDAWTDMKANGYARPLKDFVAIHMPKNTAAGFIIAALSAAVGFALIW 632

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL+  + F   +  +I +TFNY R+Y+IS++E+   E +R RL
Sbjct: 633 HMWLVAGLGFAAMMAAIIIHTFNYNRDYHISADEVVRTEGERTRL 677


>gi|254428446|ref|ZP_05042153.1| cytochrome o ubiquinol oxidase, subunit I [Alcanivorax sp. DG881]
 gi|196194615|gb|EDX89574.1| cytochrome o ubiquinol oxidase, subunit I [Alcanivorax sp. DG881]
          Length = 666

 Score =  931 bits (2407), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/585 (75%), Positives = 515/585 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRL QA++FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTGI+N+++
Sbjct: 78  MLLRGFADAIMMRLHQAMAFGDSTGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGIMNYLI 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIG RDVAFPFLNN SFWMT+GGA L+M+SLFIGEFA TGWL YPPLSGI QSPGVGV
Sbjct: 138 PLQIGTRDVAFPFLNNFSFWMTTGGAALMMVSLFIGEFAKTGWLAYPPLSGILQSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWT+LCTNILIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMSLMKMPVFTWTSLCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + T+DRY+ T FFTNDLGGN MMYVNLIWIWGHPEVYIL+LPVFGIFSE+V+T+S 
Sbjct: 258 AVLGMLTMDRYLDTAFFTNDLGGNAMMYVNLIWIWGHPEVYILILPVFGIFSEIVATYSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KPLFGYTSMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI+F+VP+LWT+GFM+TFVIGGM GV+LAVP  +F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMFRGRIKFDVPMLWTLGFMVTFVIGGMTGVLLAVPPVDFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKA GYKL+ FWGK SFWFWLIGFY AFMPLY+LG MGVTRR+SHFE
Sbjct: 438 VLFGLFAGITYWFPKATGYKLDEFWGKLSFWFWLIGFYFAFMPLYVLGLMGVTRRVSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG +LIA+GI +F IQLIVS+R+R  L+D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DQSLQIWFQIAAFGAVLIAVGIAAFAIQLIVSFRRREALVDETGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ F+ P+  F  I MPK T  GI++S  S+++GFAL+W
Sbjct: 558 PPYNFAFTPRVHDLDAWWQMKQHGFQRPESGFIPIHMPKGTWAGIVLSGISVVIGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL+  +SF+  +   IY+TFNY R+YYI +EE+  IE +R R+
Sbjct: 618 HMWLVAGVSFVALIGTAIYHTFNYDRDYYIPAEEVERIEAERTRV 662


>gi|399018611|ref|ZP_10720783.1| cytochrome o ubiquinol oxidase, subunit I [Herbaspirillum sp.
           CF444]
 gi|398100625|gb|EJL90859.1| cytochrome o ubiquinol oxidase, subunit I [Herbaspirillum sp.
           CF444]
          Length = 667

 Score =  928 bits (2399), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/585 (75%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA+SFG S G+LPP HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRAQQALSFGDSAGFLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGAGLVMASLFVGEFARTGWLAYPPLSGILGSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSGIN+IATI+KMRAPGM +M MP+FTWTALCTN+LIVAAFP+LT
Sbjct: 198 DYYIWSLQIAGVGTLLSGINLIATIVKMRAPGMNMMKMPVFTWTALCTNVLIVAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR  GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+VSTFS 
Sbjct: 258 AVLGMLSLDRVFGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEIVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTIGFMITFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFGYKL+ FWG+CSFWFW IGF+VAF PLY+LGFMGVTRRMSHFE
Sbjct: 438 VVFGMFAGINFWFPKAFGYKLDDFWGRCSFWFWCIGFWVAFTPLYVLGFMGVTRRMSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG LLIA GI SFIIQL+VSY +R  L D TGDPW  RTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAAFGALLIAAGIGSFIIQLVVSYLRRDQLRDTTGDPWGARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H +D+W  MK N +  P+D F  I MPKNT  G +I+  S ++GF L+W
Sbjct: 558 PDYNFAFTPRVHDNDAWADMKANGYTRPQDGFVPIHMPKNTGAGFIIAALSAVIGFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWLL    F+  +  +I +TFNYKR+YYI ++++  +E  R RL
Sbjct: 618 QMWLLAGAGFVALMAAIITHTFNYKRDYYIPADDVVRVEADRTRL 662


>gi|300311778|ref|YP_003775870.1| cytochrome o ubiquinol oxidase subunit I protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074563|gb|ADJ63962.1| cytochrome o ubiquinol oxidase subunit I protein [Herbaspirillum
           seropedicae SmR1]
          Length = 667

 Score =  928 bits (2398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/585 (74%), Positives = 510/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQAI+FG + G+LPP HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGILYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSGIN++ TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR  GT+FFTND+GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+VSTFS 
Sbjct: 258 AVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSEIVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWTIGFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFG+KL  FWGKCSFWFWL+GFY+AFMPLY+LG MGVTRRMSHF+
Sbjct: 438 VVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRMSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AA G  LIA+GI SFIIQ+ VS R R  L D+TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFVVAAIGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+W  MKKN ++ P   F +I MPKNT  G +I+  S ++GF L+W
Sbjct: 558 PAYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGAGFIIAALSAVLGFTLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL  + +F++ +   I +TFNY R+YYI ++E+  +E +R RL
Sbjct: 618 HMWLPAVATFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRL 662


>gi|194292957|ref|YP_002008864.1| cytochrome o ubiquinol oxidase, subunit i [Cupriavidus taiwanensis
           LMG 19424]
 gi|193226861|emb|CAQ72812.1| cytochrome o ubiquinol oxidase, subunit I [Cupriavidus taiwanensis
           LMG 19424]
          Length = 667

 Score =  928 bits (2398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/585 (74%), Positives = 514/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADAVMMRIQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT GGA+LVM+SLF+GEFA TGWL YPPLSGI QSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVGGAVLVMMSLFVGEFARTGWLAYPPLSGILQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ+AG+GTLLSGIN++ TI+KMRAPGM LM MPIFTWTALCTN+LI+AAFPVLT
Sbjct: 198 DYYLWSLQVAGVGTLLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNVLIIAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  +DRY+G +FFT+DLGG+ MMYVNLIWIWGHPEVYIL+LPVFG+FSEVV+TF  
Sbjct: 258 AALAMLAVDRYLGMNFFTSDLGGSAMMYVNLIWIWGHPEVYILILPVFGVFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKL+PFWGKCSFWFWL+GFYVAFMPLY+LG MGVTRR+SHFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLDPFWGKCSFWFWLVGFYVAFMPLYVLGLMGVTRRVSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ+A  G LLIA+GI  F++QL+VS+ +R +L D+TGDPW+GRTLEWSTSSPP
Sbjct: 498 DHSLQIWFQLAGVGALLIALGIGCFLVQLVVSFLRRESLRDVTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK + ++ P+  F  I MPKNT  GI+++  S + GFAL+W
Sbjct: 558 PPYNFAFTPVVHDNDAWWQMKAHGYQRPEHGFIPIHMPKNTGAGIILAGLSTLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  ++F  T++  I +TFNY+R++YI ++ +   E +R  L
Sbjct: 618 HIWWLAALAFFATIVTAIGHTFNYQRDFYIPADTVHRTEAERSAL 662


>gi|409406279|ref|ZP_11254741.1| cytochrome o ubiquinol oxidase subunit I protein [Herbaspirillum
           sp. GW103]
 gi|386434828|gb|EIJ47653.1| cytochrome o ubiquinol oxidase subunit I protein [Herbaspirillum
           sp. GW103]
          Length = 667

 Score =  924 bits (2387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 508/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + G+LPP HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGAMLVMASLFVGEFARTGWLAYPPLSGILYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSGIN++ TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR  GT+FFTND+GGN MMYVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 258 AVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILILPAFGVFSEIVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWTIGFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFG+KL  FWGKCSFWFWL+GFY+AFMPLY+LG MGVTRRMSHF+
Sbjct: 438 VVFGMFAGINFWFPKAFGFKLNEFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRMSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AA G  LIA+GI SFIIQ+ VS R R  L D+TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFVVAALGAGLIALGIGSFIIQIAVSIRDRKKLADVTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+W  MKKN ++ P   F +I MPKNT  G +I+  S ++GF L+W
Sbjct: 558 PAYNFAFTPVVHDNDAWADMKKNQYQRPLGDFVEIHMPKNTGAGFIIAALSAVLGFTLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL  +  F+  +   I +TFNY R+YYI ++E+  +E +R RL
Sbjct: 618 HMWLPAVAIFVALIAATIIHTFNYNRDYYIPADEVVRVEAERTRL 662


>gi|16126016|ref|NP_420580.1| ubiquinol oxidase subunit I [Caulobacter crescentus CB15]
 gi|221234787|ref|YP_002517223.1| quinol cytochrome oxidase polypeptide I [Caulobacter crescentus
           NA1000]
 gi|13423198|gb|AAK23748.1| ubiquinol oxidase subunit I [Caulobacter crescentus CB15]
 gi|220963959|gb|ACL95315.1| quinol cytochrome oxidase polypeptide I [Caulobacter crescentus
           NA1000]
          Length = 665

 Score =  922 bits (2383), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/584 (74%), Positives = 506/584 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG + GYLPPEHY+QIFTAHGVIMIFFVAMPLVTG++N +V
Sbjct: 76  MLLRGFADALMMRAQQAMAFGDATGYLPPEHYDQIFTAHGVIMIFFVAMPLVTGLMNLVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLF+GEFA TGWL YPPLS IA SPGVGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFVGEFARTGWLAYPPLSNIAYSPGVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSGIN++ TI+KMRAPGM LM MP+FTWTALCTN+LIVAAFP+LT
Sbjct: 196 DYYIWALQIAGVGTLLSGINLVVTIVKMRAPGMSLMKMPVFTWTALCTNVLIVAAFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L + DRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVVSTF  
Sbjct: 256 AVLGLLSADRYLGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGVFSEVVSTFCR 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 316 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LA+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAIPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+SHFE
Sbjct: 436 VVFGMFAGIVYWFPKAFGFRLDPFWGKLSFWFWLSGFYFAFMPLYVLGLMGVTRRVSHFE 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG +LI +GI++FI+Q++VS R R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 496 DPSLQIWFVIAAFGAVLILLGIIAFIVQIVVSIRNREALRDETGDPWDGRTLEWSTSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+WW MK+  +  P   F  I MP NT  G++++  S++ GFA++W
Sbjct: 556 PAYNFAFTPMVHDLDAWWDMKQRGYVRPTSGFIPIHMPANTGAGVVLAGLSVVCGFAMIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L ++SFI  +   I +TFN+KR+YYI +EE+  +E  R  
Sbjct: 616 HIWWLAVLSFIALVGAAIAHTFNFKRDYYIPAEEVVRVEDARTE 659


>gi|415940551|ref|ZP_11555667.1| Ubiquinol oxidase subunit 1 [Herbaspirillum frisingense GSF30]
 gi|407759152|gb|EKF68886.1| Ubiquinol oxidase subunit 1 [Herbaspirillum frisingense GSF30]
          Length = 667

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 508/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQAI+FG + G+LPP HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADAVMMRAQQAIAFGDNAGFLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGILYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSGIN++ TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR  GT+FFTND+GGN MMYVNLIWIWGHPEVYILVLP FG+FSE+VSTFS 
Sbjct: 258 AVLAMLSLDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGVFSEIVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFG+KL  FWGKCSFWFW +GFY+AFMPLY+LG MGVTRRMSHF+
Sbjct: 438 VVFGMFAGINFWFPKAFGFKLNQFWGKCSFWFWFVGFYLAFMPLYVLGLMGVTRRMSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AA G  LIA+GI SFI+Q+ VS R R  L D+TGDPW+ RTLEWSTSSPP
Sbjct: 498 DPSLQIWFVVAALGAGLIALGIGSFIMQIAVSIRDRKKLADVTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           PVYNFAF P++H +D+W  MKKN ++ P   F +I MPKNT  G +I+  S ++GF L+W
Sbjct: 558 PVYNFAFTPVVHDNDAWADMKKNKYQRPLGDFVEIHMPKNTGAGFIIAALSAVLGFTLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL  +  F++ +   I +TFNY R+YYI ++E+  +E +R RL
Sbjct: 618 HMWLPAVAIFVVLVAATIIHTFNYNRDYYIPADEVVRVEAERTRL 662


>gi|407770322|ref|ZP_11117692.1| quinol cytochrome oxidase polypeptide I [Thalassospira xiamenensis
           M-5 = DSM 17429]
 gi|407286600|gb|EKF12086.1| quinol cytochrome oxidase polypeptide I [Thalassospira xiamenensis
           M-5 = DSM 17429]
          Length = 669

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG   GYLPP+HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 79  MLLRGFADAIMMRAQQAIAFGDVAGYLPPDHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GAI VMISLF+GEFA TGWL YPPLS I  SPGVGV
Sbjct: 139 PLQIGARDVAFPFLNNFSFWMTAAGAITVMISLFVGEFAKTGWLAYPPLSDIVYSPGVGV 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWTALCTNILIVAAFPVLT
Sbjct: 199 DYYIWALQIAGVGTLLSGVNLIVTIVKMRAPGMSMMKMPVFTWTALCTNILIVAAFPVLT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVVSTF  
Sbjct: 259 AVLVLLSLDRYVGTNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPAFGVFSEVVSTFCR 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+VIT+LSY+VWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 319 KRLFGYSSMVYATIVITILSYLVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+VP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 379 FTMYKGRISFDVPMLWTMGFMLTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YWFPKAFGYKL+PFWGK SFWFWLIGFY AFMPLY+LG MGVTRRM+HF+
Sbjct: 439 VVFGMFAGIVYWFPKAFGYKLDPFWGKMSFWFWLIGFYFAFMPLYVLGLMGVTRRMNHFD 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG +LIA+GI SF++ L+VS+ KR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 499 DGSLQIWFIIAAFGAVLIAIGIASFLMSLVVSFIKREELRDETGDPWDGRTLEWSTSSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK  +  P   F DI MPKNT  G +++  SL++GFAL+W
Sbjct: 559 PAYNFAFTPVVHDLDAWADMKKRGYVRPTSGFLDIHMPKNTGAGAILAGMSLVLGFALIW 618

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +SFI  +   I +TFNY R+Y+I + E+   E +R  L
Sbjct: 619 HIWWLVAVSFIALIGTAIAHTFNYNRDYHIPASEVVATEDERTAL 663


>gi|386286948|ref|ZP_10064128.1| cytochrome o ubiquinol oxidase subunit I [gamma proteobacterium
           BDW918]
 gi|385279987|gb|EIF43919.1| cytochrome o ubiquinol oxidase subunit I [gamma proteobacterium
           BDW918]
          Length = 661

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+ QA++FG + GYLPP+HY+QIFTAHGVIMIFFVAMP V G++N+IV
Sbjct: 75  MLLRGFADAIMMRIHQAMAFGEATGYLPPDHYDQIFTAHGVIMIFFVAMPFVVGLMNYIV 134

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFWMTS GA L+MISLFIGEFA +GWL YPPL+GI QSPGVGV
Sbjct: 135 PLQIGARDVAFPFLNNLSFWMTSAGAALIMISLFIGEFAKSGWLAYPPLTGILQSPGVGV 194

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSGIN + TI+KMRAPGM +M MPIFTWTALCTNILIVAAFPVLT
Sbjct: 195 DYYIWSLQIAGVGTLLSGINFVVTIVKMRAPGMNMMKMPIFTWTALCTNILIVAAFPVLT 254

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +V+ L +LDRY+  +FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSE+VST+S 
Sbjct: 255 AVMTLLSLDRYLDMNFFTNDLGGNAMMYVNLIWIWGHPEVYILILPIFGVFSEIVSTYSG 314

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+VIT+LSY+VWLHHFFTMGSGA VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 315 KRLFGYSSMVYATLVITILSYLVWLHHFFTMGSGATVNSFFGITTMIISIPTGAKIFNWL 374

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+FEVP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 375 FTMYRGRIQFEVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 434

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I +W+PK  GYKLEPFWGK SFW W IGFY+AFMPLY+LGFMGVTRRMSHF+
Sbjct: 435 VVFGTFAAITFWYPKVTGYKLEPFWGKVSFWCWFIGFYLAFMPLYMLGFMGVTRRMSHFD 494

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIA  G +LI  GI++F++QL VSY++R +L D TGDPW GRTLEWSTSSPP
Sbjct: 495 DPSLQIWFQIALGGAVLIGAGIIAFLVQLYVSYKRRDSLRDETGDPWGGRTLEWSTSSPP 554

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P ++  D+WW+MK N FK   D F  I MPKNT  G++IS  S   GFA+VW
Sbjct: 555 PKYNFAFTPRVYDLDAWWHMKSNGFKHATDGFMPIHMPKNTAAGMVISGLSAAFGFAMVW 614

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL+  ++F   +I +I +TFNYKR+YYI +EE+  +E +R  +
Sbjct: 615 HMWLIGGLTFAALMIAIIAHTFNYKRDYYIPAEEVALVEAQRTEV 659


>gi|407694830|ref|YP_006819618.1| cytochrome o ubiquinol oxidase subunit I [Alcanivorax dieselolei
           B5]
 gi|407252168|gb|AFT69275.1| Cytochrome o ubiquinol oxidase, subunit I [Alcanivorax dieselolei
           B5]
          Length = 667

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/570 (75%), Positives = 509/570 (89%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQA +FG + GYLPPEHY+QIFTAHGVIMIFFVAMPLVTGI+N++V
Sbjct: 78  MLLRGFADAIMMRIQQAWAFGDATGYLPPEHYDQIFTAHGVIMIFFVAMPLVTGIMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLFIGEFA TGWL YPPL+GI +SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTSGAVLVMVSLFIGEFAKTGWLAYPPLAGIDKSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTMMKMPVFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+GT+FFT D GGN MMY+NLIWIWGHPEVYIL+LP FG+FSE+VST+S 
Sbjct: 258 AVLAMLTLDRYLGTNFFTEDGGGNAMMYINLIWIWGHPEVYILILPAFGVFSEIVSTYSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF+VP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFDVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+++ I YWFPKAFG+KL+PFWGK SFWFWL GFY AFMPLY+LG MGVTRRMS F+
Sbjct: 438 VLFGMLAAITYWFPKAFGFKLDPFWGKVSFWFWLTGFYFAFMPLYVLGLMGVTRRMSQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ+AAFG +LIA+GI +F+IQL+VS+ +R +L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQVAAFGAVLIAIGIAAFLIQLVVSFMRRESLRDETGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK++ +K P+  F  I MPKNT  GI+++  S ++GFAL+W
Sbjct: 558 PAYNFAFTPRVHDLDAWWQMKQHGYKRPESGFLPIHMPKNTGAGIILAGISTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYI 570
           HMWLL  +SF+  L++ I +TFNY R+Y+I
Sbjct: 618 HMWLLAGVSFLGLLVVAIGHTFNYNRDYHI 647


>gi|187928957|ref|YP_001899444.1| cytochrome o ubiquinol oxidase subunit I [Ralstonia pickettii 12J]
 gi|187725847|gb|ACD27012.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia pickettii 12J]
          Length = 667

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAVMMRIQQAVAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGAILVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAILVMMSLFVGEFARTGWLAYPPLSGILASPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT+LSGIN++ TI+KMRAPGM LM MPIFTWTALCTN LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTVLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNTLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L  LDRY+GTHFFT + GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEVV+T+S 
Sbjct: 258 AAVTLLALDRYLGTHFFTVEQGGSAMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATYSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTIGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFW +GFY+AFMPLY LG +GVTRRM+HF+
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWFVGFYIAFMPLYWLGMLGVTRRMNHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G LLIA+GI  F+IQL+VS+ +R  L D TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAALGALLIAIGIACFLIQLVVSFLRREELRDTTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  PL+H +D+WW MK+  ++ P++ F+ I MPK T  GI+++  S + GFAL+W
Sbjct: 558 PQYNFAMTPLVHDADAWWQMKQYGYRRPQEGFKPIHMPKGTAAGIVLAGLSTLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L I+SF  T++  I +TFNYKR+YYI +EE+   E  R +L
Sbjct: 618 HIWWLAIVSFAATILSAIIHTFNYKRDYYIPAEEVIRTEASRTQL 662


>gi|110834897|ref|YP_693756.1| cytochrome c oxidase subunit I [Alcanivorax borkumensis SK2]
 gi|110648008|emb|CAL17484.1| cytochrome c oxidase, subunit I [Alcanivorax borkumensis SK2]
          Length = 669

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/570 (76%), Positives = 507/570 (88%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRL QA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTGI+N+++
Sbjct: 81  MLLRGFADAIMMRLHQAMAFGDATGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGIMNYLI 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIG RDVAFPFLNN SFWMT+GGA+L+M+SLF+GEFA TGWL YPPLSGI QSPGVGV
Sbjct: 141 PLQIGTRDVAFPFLNNFSFWMTTGGAVLLMVSLFVGEFAKTGWLAYPPLSGILQSPGVGV 200

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWT+LCTNILIVAAFPVLT
Sbjct: 201 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMSLMKMPVFTWTSLCTNILIVAAFPVLT 260

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + ++DRY+ T FFTNDLGGN MMYVNLIWIWGHPEVYIL+LPVFGIFSE+VST+S 
Sbjct: 261 AVLAMLSMDRYLDTAFFTNDLGGNAMMYVNLIWIWGHPEVYILILPVFGIFSEIVSTYSR 320

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 321 KPLFGYTSMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 380

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRIRF+VP+LWT+GFM+TFVIGGM GV+LAVP  +F+LHNSLFL+AHFHNVIIGG
Sbjct: 381 FTMFRGRIRFDVPMLWTLGFMVTFVIGGMTGVLLAVPPVDFVLHNSLFLIAHFHNVIIGG 440

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKA GYKL+ FWGK SFWFWLIGFY AFMPLY+LG MGVTRR+SHFE
Sbjct: 441 VLFGLFAGITYWFPKATGYKLDEFWGKMSFWFWLIGFYFAFMPLYVLGLMGVTRRVSHFE 500

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQIWFQIAAFG +LIA+GI SFIIQL+VS+ +R +L D TGDPW+GRTLEWSTSSPP
Sbjct: 501 DMSLQIWFQIAAFGAVLIAVGIASFIIQLVVSFMRRESLKDETGDPWDGRTLEWSTSSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +HQ D+WW MK++ F+ P+  F  I MPK T  GI++S  S+ +GFA++W
Sbjct: 561 PPYNFAFTPRVHQLDAWWQMKQHGFQRPESGFIAIHMPKGTWAGIVLSGISVAIGFAMIW 620

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYI 570
           HMWLL  +SF+  +  VIY+TFNY R YYI
Sbjct: 621 HMWLLAGVSFVALIGTVIYHTFNYDREYYI 650


>gi|309781937|ref|ZP_07676668.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia sp. 5_7_47FAA]
 gi|404377625|ref|ZP_10982725.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia sp. 5_2_56FAA]
 gi|308919281|gb|EFP64947.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia sp. 5_7_47FAA]
 gi|348611512|gb|EGY61157.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia sp. 5_2_56FAA]
          Length = 667

 Score =  917 bits (2369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/585 (74%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAVMMRIQQAVAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAVLVMMSLFVGEFARTGWLAYPPLSGILASPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT+LSGIN++ TI+KMRAPGM LM MPIFTWTALCTN LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTVLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNTLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L  LDRY+GTHFFT + GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 AAVTLLALDRYLGTHFFTVEQGGSAMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTIGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFW +GFY+AFMPLY LG +GVTRRM+HF+
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWFVGFYIAFMPLYWLGMLGVTRRMNHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G LLIA+GI  F+IQL+VS+ +R  L D TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAALGALLIAVGIACFLIQLVVSFLRREELRDTTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  PL+H +D+WW MK+  ++ P++ F+ I MPK T  GI+++  S + GFAL+W
Sbjct: 558 PQYNFAMTPLVHDADAWWQMKQYGYRRPQEGFKPIHMPKGTAAGIVLAGLSTLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L I SF  T++  I +TFNYKR+YYI +EE+   E  R +L
Sbjct: 618 HIWWLAIASFAATILSAIIHTFNYKRDYYIPAEEVIRTEASRTQL 662


>gi|241663145|ref|YP_002981505.1| cytochrome o ubiquinol oxidase subunit I [Ralstonia pickettii 12D]
 gi|240865172|gb|ACS62833.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia pickettii 12D]
          Length = 667

 Score =  917 bits (2369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/585 (74%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAVMMRIQQAVAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAVLVMMSLFVGEFARTGWLAYPPLSGILASPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT+LSGIN++ TI+KMRAPGM LM MPIFTWTALCTN LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTVLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNTLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L  LDRY+GTHFFT + GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 AAVTLLALDRYLGTHFFTVEQGGSAMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTIGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFW +GFY+AFMPLY LG +GVTRRM+HF+
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWFVGFYIAFMPLYWLGMLGVTRRMNHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G LLIA+GI  F+IQL+VS+ +R  L D TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAALGALLIAVGIACFLIQLVVSFLRREELRDTTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  PL+H +D+WW MK+  ++ P++ F+ I MPK T  GI+++  S + GFAL+W
Sbjct: 558 PQYNFAMTPLVHDADAWWQMKQYGYRRPQEGFKPIHMPKGTAAGIVLAGLSTLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L I SF  T++  I +TFNYKR+YYI +EE+   E  R +L
Sbjct: 618 HIWWLAIASFAATILSAIIHTFNYKRDYYIPAEEVIRTEASRTQL 662


>gi|408373919|ref|ZP_11171611.1| cytochrome o ubiquinol oxidase subunit I 2 [Alcanivorax
           hongdengensis A-11-3]
 gi|407766207|gb|EKF74652.1| cytochrome o ubiquinol oxidase subunit I 2 [Alcanivorax
           hongdengensis A-11-3]
          Length = 668

 Score =  916 bits (2367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/573 (75%), Positives = 500/573 (87%), Gaps = 1/573 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR+QQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMP V G++NF+V
Sbjct: 78  MLLRGFSDAIMMRIQQAIAFGDNAGYLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN S+WMT  GA+L MISLF+GEFA TGWL YPPLSGI QSP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSYWMTVAGAVLTMISLFVGEFAKTGWLAYPPLSGIMQSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N   TIIKMRAPGM LM MP+FTWTALCTNILIVAAFP+LT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNFTVTIIKMRAPGMSLMKMPVFTWTALCTNILIVAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+GTHFFTNDLGGN MMY+NLIWIWGHPEVYIL+LP+FG+FSE+V+T+S 
Sbjct: 258 AVLAMLTLDRYLGTHFFTNDLGGNAMMYINLIWIWGHPEVYILILPLFGVFSEIVATYSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+FEVP+LWT+GFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIKFEVPMLWTVGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ + I YW+PK FGYKL+PFWGKCSFWFW IGFY AFMPLY+LG MGVTRR++HF+
Sbjct: 438 VVFGVFAAITYWYPKVFGYKLDPFWGKCSFWFWCIGFYFAFMPLYVLGLMGVTRRINHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           D SLQIWF +AAFG  LIA+GI SF+IQL+VSYRKR    D+TGDPW NGRTLEWSTSSP
Sbjct: 498 DPSLQIWFIVAAFGAFLIALGIASFLIQLVVSYRKRDQNRDLTGDPWGNGRTLEWSTSSP 557

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YN+AF P IH +DSWW MK+  FK P+  F  I MPKNT  G+L++      GFA++
Sbjct: 558 PPQYNYAFTPRIHDTDSWWQMKQEGFKRPESGFVAIHMPKNTMAGMLLAGLCTAFGFAMI 617

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISS 572
           WHMWL+  +SF   LI  I +TFNY R+YYI +
Sbjct: 618 WHMWLIAGVSFATMLISAIVHTFNYDRDYYIPA 650


>gi|430805879|ref|ZP_19432994.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus sp. HMR-1]
 gi|429501871|gb|ELA00196.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus sp. HMR-1]
          Length = 667

 Score =  913 bits (2360), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQA++FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAVMMRMQQAVAFGDNAGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGAILVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAILVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSGIN++ TI+KMRAPGM LM MPIFTWT+LCTN+LI+AAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGINLLVTIVKMRAPGMTLMRMPIFTWTSLCTNVLIIAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY GT+FFT D GG+ MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TF+ 
Sbjct: 258 AALALLALDRYAGTNFFTADQGGSAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFAR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTVGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFW +GFY AFMPLY LG +GVTRRM+HF+
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWFVGFYFAFMPLYWLGLLGVTRRMNHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG LLIA+GI  F+IQL+VS+ +R  L D TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAAFGALLIAIGIACFLIQLVVSFMRREELRDTTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW+MK N F+ P+  F  I MPK T  GI+++  S I GFAL+W
Sbjct: 558 PQYNFAFTPVVHDTDAWWHMKHNGFQRPEQGFIPIHMPKGTAAGIVLAGLSTICGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L I SF  T+I  I +TFNYKR+YYIS+E++   E  R +L
Sbjct: 618 HIWWLVIASFAATIITAIIHTFNYKRDYYISAEQVVRTEAARTQL 662


>gi|33600295|ref|NP_887855.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           RB50]
 gi|412339457|ref|YP_006968212.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           253]
 gi|427813530|ref|ZP_18980594.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           1289]
 gi|33567894|emb|CAE31807.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           RB50]
 gi|408769291|emb|CCJ54067.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           253]
 gi|410564530|emb|CCN22077.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           1289]
          Length = 673

 Score =  912 bits (2358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/585 (74%), Positives = 510/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 84  MLLRGFADAIMMRLQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 144 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 204 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 264 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 324 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 384 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 444 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI SF+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 504 DASLQIWFQAAALGALLIALGIASFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P+  F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 564 PAYNFAFTPRVHDLDAWWQMKQCGYARPQQGFVPIHMPSNTWAGIVLAGLSGVLGFALIW 623

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 624 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 668


>gi|134095869|ref|YP_001100944.1| cytochrome o ubiquinol oxidase subunit I [Herminiimonas
           arsenicoxydans]
 gi|133739772|emb|CAL62823.1| Ubiquinol oxidase subunit 1 (Ubiquinol oxidase polypeptide I)
           (Cytochrome o subunit 1) (Oxidase BO(3) subunit 1)
           (Cytochrome o ubiquinol oxidase subunit 1) (Ubiquinol
           oxidase chain A) [Herminiimonas arsenicoxydans]
          Length = 667

 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/585 (73%), Positives = 508/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLMRGFADALMMRAQQAMAFGDNAGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+L+M+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGAVLIMVSLFVGEFAKTGWLAYPPLSGILASPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM +M MP+FTWTALCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMDMMKMPVFTWTALCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR + THFFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTFS+
Sbjct: 258 AVLAMLSLDRMVDTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFSA 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRIFGYTSMVYATVVITILSYMVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI FE+P++WTIGFMITFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRITFELPMMWTIGFMITFVLGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ + INYWFPKAFG+KL+ FWGKCSFWFWL+GF++AFMPLYILG MGVTRRMSHF 
Sbjct: 438 VVFGVFAAINYWFPKAFGFKLDVFWGKCSFWFWLVGFWMAFMPLYILGMMGVTRRMSHFS 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G +LIA+GI S +IQ  VS+++RH L D+TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAAVGAVLIALGIASMLIQFYVSFKRRHELRDVTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P ++ +DSW  MKKN ++ P   F  I MPKNT  G +IS  S  +GF L+W
Sbjct: 558 PDYNFAFTPKVYDTDSWSDMKKNGYQRPLQGFTAIHMPKNTGAGFIISALSGALGFCLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWLL  ISF   +  +I +TFNYKR+YYI ++E+   E  R +L
Sbjct: 618 QMWLLAGISFAAVIAAIIIHTFNYKRDYYIPADEVARTENARTKL 662


>gi|73538716|ref|YP_299083.1| cytochrome-c oxidase [Ralstonia eutropha JMP134]
 gi|72122053|gb|AAZ64239.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Ralstonia
           eutropha JMP134]
          Length = 667

 Score =  912 bits (2356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQ+++FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADAVMMRMQQSVAFGDNLGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAVLVMMSLFVGEFARTGWLAYPPLSGIVHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ+AG+GT+LSGIN++ TIIKMRAPGM LM MPIFTWTALC N+LIVAAFPVLT
Sbjct: 198 DYYLWSLQVAGVGTVLSGINLMVTIIKMRAPGMTLMRMPIFTWTALCANVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G +FFT DLGG+ MMYVNLIWIWGHPEVYILVLPVFG+FSEVVSTF  
Sbjct: 258 AALAMLALDRYLGMNFFTADLGGSAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVSTFCQ 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGYKLEPFWGKCSFW WL+GFY AFMPLY+LG  GVTRRMSHFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYKLEPFWGKCSFWLWLVGFYFAFMPLYVLGMKGVTRRMSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ+WF +AAFG  LIA+GI  F+IQL+VS+  R  L D+TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQVWFLLAAFGAFLIALGIGCFLIQLVVSFINREALRDVTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK + ++ P   F  I MPKNT  GI+++  + + GFAL+W
Sbjct: 558 PAYNFAFTPIVHDTDAWWQMKAHGYERPAQGFIPIHMPKNTGAGIILAGLATVCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L +++F  T++  + +TFNYKR+YYI ++ +   E  R  L
Sbjct: 618 HIWWLVVLAFGATIVSALVHTFNYKRDYYIPADTVGNTEAARSAL 662


>gi|417110070|ref|ZP_11963506.1| cytochrome O ubiquinol oxidase protein, subunit I [Rhizobium etli
           CNPAF512]
 gi|327188658|gb|EGE55864.1| cytochrome O ubiquinol oxidase protein, subunit I [Rhizobium etli
           CNPAF512]
          Length = 667

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/585 (72%), Positives = 508/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLVLLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSW+ MK+  ++ P   F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPLVHDHDSWYDMKRRGYERPLGGFKPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  +++ I +TFNY+R++YI +E++T  E KR  L
Sbjct: 618 YMWWLVVVSFVALIVVAIGHTFNYRRDFYIPAEDVTETEGKRTTL 662


>gi|222084386|ref|YP_002542915.1| cytochrome o ubiquinol oxidase subunit I [Agrobacterium radiobacter
           K84]
 gi|398382231|ref|ZP_10540328.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. AP16]
 gi|221721834|gb|ACM24990.1| cytochrome o ubiquinol oxidase, subunit I [Agrobacterium
           radiobacter K84]
 gi|397717922|gb|EJK78519.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. AP16]
          Length = 667

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/585 (72%), Positives = 508/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++F  S GYLPP HY+Q+FTAHGVIMIFFVAMP+VTG++NF+V
Sbjct: 78  MLLRGFSDALMMRAQQALAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPMVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI+VMISLFIGEFA TGWL YPPLSGIA SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIVMISLFIGEFAKTGWLAYPPLSGIAYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AGIGTLLSGIN++ATI+KMRAPGM +M MPIFTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWGLQVAGIGTLLSGINLVATIVKMRAPGMTMMKMPIFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVV+TF+S
Sbjct: 258 AVLALLSLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGVFSEVVATFAS 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVAFMVTFTIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +GI YWFPKAFG+KL+PFWGK SFWFW++GFY AFMPLY+LG MGVTRR+S F+
Sbjct: 438 VLFGMFAGIAYWFPKAFGFKLDPFWGKMSFWFWVVGFYFAFMPLYVLGLMGVTRRVSQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQI+F IAA G ++IA+GI SF+IQL+VS+ KR  L D+TGDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIYFIIAALGAVMIAIGIASFLIQLVVSFIKREELRDLTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P+++  D+WW MK    K P + F  I MPKNT  GI++ + S+   F ++W
Sbjct: 558 PAYNFALTPIVYDHDAWWDMKNRGHKRPTEGFIPIHMPKNTGTGIILGVLSIAFAFGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  I+F   +++ I +TFNYKR++YI ++E+   E +R +L
Sbjct: 618 YMWWLAAITFAAMIVVTIGHTFNYKRDFYIPADEVVKTENERTKL 662


>gi|410474069|ref|YP_006897350.1| cytochrome ubiquinol oxidase subunit I [Bordetella parapertussis
           Bpp5]
 gi|408444179|emb|CCJ50892.1| cytochrome ubiquinol oxidase subunit I [Bordetella parapertussis
           Bpp5]
          Length = 673

 Score =  911 bits (2354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/585 (74%), Positives = 510/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 84  MLLRGFADAIMMRLQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 144 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 204 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 264 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 324 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 384 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 444 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI +F+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 504 DASLQIWFQAAALGALLIALGIANFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P+  F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 564 PAYNFAFTPRVHDLDAWWQMKQCGYARPQQGFVPIHMPSNTWAGIVLAGLSGVLGFALIW 623

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 624 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 668


>gi|410419059|ref|YP_006899508.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           MO149]
 gi|427824335|ref|ZP_18991397.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           Bbr77]
 gi|408446354|emb|CCJ58022.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           MO149]
 gi|410589600|emb|CCN04673.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           Bbr77]
          Length = 673

 Score =  911 bits (2354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/585 (74%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 84  MLLRGFADAIMMRLQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 144 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 204 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 264 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 324 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 384 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 444 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI SF+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 504 DASLQIWFQAAALGALLIALGIASFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P   F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 564 PAYNFAFTPRVHDLDAWWQMKQCGYARPLQGFVPIHMPSNTWAGIVLAGLSGVLGFALIW 623

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 624 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 668


>gi|427820684|ref|ZP_18987747.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           D445]
 gi|410571684|emb|CCN19923.1| cytochrome ubiquinol oxidase subunit I [Bordetella bronchiseptica
           D445]
          Length = 673

 Score =  910 bits (2352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/585 (74%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 84  MLLRGFADAIMMRLQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 144 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 204 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 264 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 324 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 384 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 444 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI SF+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 504 DASLQIWFQAAALGALLIALGIASFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P   F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 564 PAYNFAFTPRVHDLDAWWQMKQYGYARPLQGFVPIHMPSNTWAGIVLAGLSGVLGFALIW 623

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 624 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 668


>gi|190895346|ref|YP_001985638.1| cytochrome O ubiquinol oxidase, subunit I [Rhizobium etli CIAT 652]
 gi|190699291|gb|ACE93375.1| cytochrome O ubiquinol oxidase protein, subunit I [Rhizobium etli
           CIAT 652]
          Length = 667

 Score =  910 bits (2352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/585 (72%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRAQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLVLLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK+  ++ P   F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKRRGYERPLGGFKPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  +++ I +TFNY+R++YI +E++T  E KR  L
Sbjct: 618 YMWWLVVVSFVALIVVAIGHTFNYRRDFYIPAEDVTETEGKRTTL 662


>gi|408414703|ref|YP_006625410.1| cytochrome ubiquinol oxidase subunit I [Bordetella pertussis 18323]
 gi|401776873|emb|CCJ62120.1| cytochrome ubiquinol oxidase subunit I [Bordetella pertussis 18323]
          Length = 666

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/585 (74%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 77  MLLRGFADAIMMRLQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 137 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 197 DYYIWTLQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 257 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 317 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 437 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI SF+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 497 DASLQIWFQAAALGALLIALGIASFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P   F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 557 PAYNFAFTPRVHDLDAWWQMKQYGYARPLQGFVPIHMPSNTWAGIVLAGLSGVLGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 617 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 661


>gi|33593694|ref|NP_881338.1| cytochrome ubiquinol oxidase subunit I [Bordetella pertussis Tohama
           I]
 gi|384204984|ref|YP_005590723.1| cytochrome ubiquinol oxidase subunit I [Bordetella pertussis CS]
 gi|33563767|emb|CAE43007.1| cytochrome ubiquinol oxidase subunit I [Bordetella pertussis Tohama
           I]
 gi|332383098|gb|AEE67945.1| cytochrome ubiquinol oxidase subunit I [Bordetella pertussis CS]
          Length = 666

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/585 (74%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 77  MLLRGFADAIMMRLQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 137 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 197 DYYIWTLQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 257 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 317 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 437 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI SF+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 497 DASLQIWFQAAALGALLIALGIASFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P   F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 557 PAYNFAFTPRVHDLDAWWQMKQYGYARPLQGFVPIHMPSNTWAGIVLTGLSGVLGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 617 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 661


>gi|158423723|ref|YP_001525015.1| cytochrome o ubiquinol oxidase subunit I [Azorhizobium caulinodans
           ORS 571]
 gi|158330612|dbj|BAF88097.1| cytochrome o ubiquinol oxidase subunit I [Azorhizobium caulinodans
           ORS 571]
          Length = 670

 Score =  909 bits (2350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/585 (73%), Positives = 501/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG S GYLP  HY+Q+FTAHGVIMIFFVAMPLVTG +NF+V
Sbjct: 79  MLLRGFADAIMMRLQQAIAFGGSEGYLPAHHYDQVFTAHGVIMIFFVAMPLVTGFMNFVV 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+L+M SLFIGEFA TGWL YPPLSGI  SP VGV
Sbjct: 139 PLQIGARDVSFPFLNNFSFWMTVGGAVLIMASLFIGEFAKTGWLAYPPLSGIGYSPDVGV 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSG+N+I TIIKMRAPGM LM MP+FTWTALCTN+LIVA+FPVLT
Sbjct: 199 DYYIWGLQVAGVGTTLSGVNLICTIIKMRAPGMSLMKMPVFTWTALCTNVLIVASFPVLT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTND GG+ M+YVNLIWIWGHPEVYILVLPVFGIFSEV STF+ 
Sbjct: 259 ACLALLSLDRYVGTNFFTNDFGGSPMLYVNLIWIWGHPEVYILVLPVFGIFSEVTSTFAG 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 319 KRLFGYTSMVYATVAITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+++T+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 379 FTMYRGRIRFEVPMMYTVAFMLTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +WFPKAFG+KL+PFWGKCSFWFW++GFY AFMPLY+LGFMGVTRRM  FE
Sbjct: 439 VVFGIFAGIAFWFPKAFGFKLDPFWGKCSFWFWVVGFYFAFMPLYVLGFMGVTRRMRVFE 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AAFG  LIA+GIL F+IQL VS  +R  L D TGDPWN RTLEW+TSSPP
Sbjct: 499 DPSLQIWFVVAAFGAALIALGILCFLIQLGVSILRRDKLRDTTGDPWNARTLEWATSSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W+ MK   ++ P   F+ I MP+NT  G+L++  S  MGF L+W
Sbjct: 559 PAYNFAFTPVVHDHDAWYDMKARGYERPLTGFKPIHMPQNTGAGVLLAACSTAMGFGLIW 618

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L   SFI  L I I +TFNY R++YIS+EE+T  E +R RL
Sbjct: 619 YMWWLVAASFIALLAIAIGHTFNYHRDFYISAEEVTRTEDERTRL 663


>gi|409441190|ref|ZP_11268185.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Rhizobium mesoamericanum STM3625]
 gi|408747485|emb|CCM79382.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Rhizobium mesoamericanum STM3625]
          Length = 667

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/585 (74%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQAI+F  S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++N +V
Sbjct: 78  MLLRGFSDAIMMRLQQAIAFNGSAGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNLVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++MISLF+GEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMISLFVGEFAQTGWLAYPPLSGSAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWT+LCTNILIVA FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMSFMKMPVFTWTSLCTNILIVATFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFGYKL+PFWGK SFWFWLIGFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVTYWFPKAFGYKLDPFWGKMSFWFWLIGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG +LIA+GI SFIIQL+VS+ KR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGAVLIAIGIASFIIQLVVSFFKREELRDTTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MPKNT  G+++   S+++ FAL+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKARGYARPLEGFKPIHMPKNTGTGVILGAISVVLAFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  +SF   L + I +TFNYKR++YI +EE+T  E KR  L
Sbjct: 618 YMWWLAALSFAAMLAVAIGHTFNYKRDFYIPAEEVTETEGKRTAL 662


>gi|365855472|ref|ZP_09395520.1| cytochrome o ubiquinol oxidase, subunit I [Acetobacteraceae
           bacterium AT-5844]
 gi|363719121|gb|EHM02437.1| cytochrome o ubiquinol oxidase, subunit I [Acetobacteraceae
           bacterium AT-5844]
          Length = 667

 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 504/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N +V
Sbjct: 79  MLLRGFADAIMMRLQQAIAFNGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNLVV 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGA+LVM+SLFIGEFA TGWL Y PLSG   SP VGV
Sbjct: 139 PLQIGARDVAFPFLNNFSFWMTAGGAVLVMMSLFIGEFAQTGWLAYAPLSGSDYSPWVGV 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GTLLSG+N++ATI+KMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 199 DYYIWSLQVAGVGTLLSGVNLLATIVKMRAPGMTLMKMPVFTWTALCTNALIVASFPVLT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVVSTF  
Sbjct: 259 AVLALLSLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGVFSEVVSTFCR 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 319 KRLFGYTSMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP++WT+GFM+TFV+GGM GV+LAVP A+F  HN+LFL+AHFHNVIIGG
Sbjct: 379 FTMYRGRIRYEVPMMWTVGFMLTFVVGGMTGVMLAVPPADFQFHNTLFLIAHFHNVIIGG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YWFPKAFGY+L+PFWGK SFW WLIGF+VAFMPLY+LG MGVTRR+S FE
Sbjct: 439 VVFGMFAGIVYWFPKAFGYRLDPFWGKVSFWCWLIGFWVAFMPLYVLGLMGVTRRVSRFE 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA+GI +F++QL VS+ KR  L D+TGDPW+GRTLEWSTSSPP
Sbjct: 499 DPSLQIWFIIAACGAGIIALGIAAFLMQLFVSFLKRDQLRDVTGDPWDGRTLEWSTSSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+WW MK+   + P   +  I MPKNT  GI+++  S+ MGFALVW
Sbjct: 559 PAYNFAFTPVIHSHDAWWDMKQRGHERPLQGYHPIHMPKNTGAGIILAGLSVAMGFALVW 618

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  ++F+ ++   I ++FNY R++YI +EE+   E  R RL
Sbjct: 619 HIWWLVALTFVASIAGTIIHSFNYNRDFYIPAEEVAQTEGSRTRL 663


>gi|33595769|ref|NP_883412.1| cytochrome ubiquinol oxidase subunit I [Bordetella parapertussis
           12822]
 gi|33565848|emb|CAE36394.1| cytochrome ubiquinol oxidase subunit I [Bordetella parapertussis]
          Length = 673

 Score =  908 bits (2347), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/585 (74%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG + GY PP HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 84  MLLRGFADAIMMRLQQAIAFGDNLGYPPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 144 PLQIGARDVAFPFLNNFSFWMTATGAVLVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM LM MP+FTWTALCTNILIVAAFPVLT
Sbjct: 204 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMTLMRMPVFTWTALCTNILIVAAFPVLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L ++DRY+GT+FFT D GGN MMYVNL+WIWGHPEVYIL+LP FGIFSEVV+T+  
Sbjct: 264 AVLALLSMDRYVGTNFFTADGGGNAMMYVNLVWIWGHPEVYILILPAFGIFSEVVATYCR 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 324 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FEVP+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 384 FTMYRGRIHFEVPMLWTLGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 444 VLFGLMAGITYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ AA G LLIA+GI +F+IQL+VSYR+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 504 DASLQIWFQAAALGALLIALGIANFLIQLVVSYRRREALRDDTGDPWDGRTLEWSTSSPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H  D+WW MK+  +  P+  F  I MP NT  GI+++  S ++GFAL+W
Sbjct: 564 PAYNFAFTPRVHDLDAWWQMKQCGYARPQQGFVPIHMPSNTWAGIVLAGLSGVLGFALIW 623

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L +++F   + + I +TFNY+R++Y+ +EE+   E  R  L
Sbjct: 624 HMWPLVVLAFAALIGVTIAHTFNYQRDHYVPAEEVVRCEAARTAL 668


>gi|424884307|ref|ZP_18307922.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM2012]
 gi|393178006|gb|EJC78046.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM2012]
          Length = 667

 Score =  908 bits (2347), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTSGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLVLLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPKNTGTGAILSGISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L + I +TFNY+R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVGLLAVAIGHTFNYRRDFHIPAEEVTETEGKRTAL 662


>gi|116694971|ref|YP_729182.1| bo3-type chinol oxidase, subunit I [Ralstonia eutropha H16]
 gi|113529470|emb|CAJ95817.1| bo3-type chinol oxidase, subunit I [Ralstonia eutropha H16]
          Length = 667

 Score =  908 bits (2346), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/584 (73%), Positives = 505/584 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAIMMRIQQAIAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGAILVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAILVMMSLFVGEFARTGWLAYPPLSGIIHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSGIN++ TI+KMRAPGM LM MPIFTWTALCTN+LI+AAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNVLIIAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+GT+FFT +LGG+ MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TF  
Sbjct: 258 AALALLALDRYVGTNFFTTELGGSAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTIGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFWL+GFY AFMPLY LG  GVTRRMSHFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWLVGFYFAFMPLYWLGLHGVTRRMSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + Q+WFQ+AAFG LLIA+GI  F++QL+VS+  R  L D+TGDPWNGRTLEWSTSSPP
Sbjct: 498 DATHQVWFQLAAFGALLIAIGIACFLVQLVVSFIHREELRDLTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW+MK+N +  P+  F  I MPKNT  GI+++ FS + GFAL+W
Sbjct: 558 PQYNFAFTPVVHDTDAWWHMKQNGYARPQQGFIPIHMPKNTAAGIVLAGFSTLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L   SF  T+I  I +TFNY+R+YY+ ++ +   E  R +
Sbjct: 618 HIWWLAAASFAATIIGAIIHTFNYQRDYYLPADLVVQTEAARTQ 661


>gi|399039929|ref|ZP_10735383.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. CF122]
 gi|398061814|gb|EJL53600.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. CF122]
          Length = 667

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/585 (74%), Positives = 503/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQAI+F  S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++N +V
Sbjct: 78  MLLRGFSDAIMMRLQQAIAFNGSGGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNLVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++MISLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMISLFVGEFAQTGWLAYPPLSGSDYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTNILIVA FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMSFMKMPVFTWTALCTNILIVATFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTMGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFGYKL+PFWGK SFWFWLIGFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVTYWFPKAFGYKLDPFWGKMSFWFWLIGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG +LIA+GI SFIIQL+VS+ KR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGAVLIAIGIASFIIQLVVSFFKREELRDTTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MPKNT  G+++   S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKGRGYARPLEGFKPIHMPKNTGTGVILGALSIGLAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L I+SF   L + I +TFNYKR++YI +EE+T  E KR  L
Sbjct: 618 YMWWLAILSFAAMLAVAIGHTFNYKRDFYIPAEEVTETEGKRTAL 662


>gi|374294374|ref|YP_005041399.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Azospirillum lipoferum 4B]
 gi|357428372|emb|CBS91329.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Azospirillum lipoferum 4B]
          Length = 665

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/585 (72%), Positives = 504/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 76  MLLRGFADAIMMRAQQAIAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+L+MISLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLIMISLFVGEFARTGWLAYPPLSGIEASPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GTHFFT+D+GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV STF  
Sbjct: 256 AVLVLLSLDRYVGTHFFTSDMGGNPMMYVNLIWIWGHPEVYILILPCFGIFSEVTSTFCG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 316 KKLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFELPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YW+PKAFG++L+PFWGK SFW W+IGFY AFMPLY+LG MGVTRR+  FE
Sbjct: 436 VLFGLFAGIYYWWPKAFGFRLDPFWGKVSFWCWVIGFYAAFMPLYVLGLMGVTRRLRVFE 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G +LIAMGI +F++Q+ VS  KR  L+D+TGDPW+GRTLEW+TSSPP
Sbjct: 496 DPSLQIWFQIAAVGAVLIAMGIGAFLVQIAVSVLKRRQLVDVTGDPWDGRTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MKK  +  P D ++ I MP NT  G++++  S  +GFALVW
Sbjct: 556 PGYNFAFTPVIHDNDAWWDMKKRGYARPLDGYRPIHMPANTGTGVILAGISTALGFALVW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +SFI  L++ I +TFNY R+++I  EE+   E +R RL
Sbjct: 616 HIWWLAALSFIGLLVVAISHTFNYNRDFHIPVEEVVRTENERTRL 660


>gi|15887496|ref|NP_353177.1| cytochrome O ubiquinol oxidase subunit I [Agrobacterium fabrum str.
           C58]
 gi|15155019|gb|AAK85962.1| cytochrome O ubiquinol oxidase subunit I [Agrobacterium fabrum str.
           C58]
          Length = 667

 Score =  904 bits (2335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+ G S GYLPP HY+QIFTAHGVIMIFF+AMP++TG++NF+V
Sbjct: 78  MLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPMITGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI+ MISLF+GE+A TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFVGEYAQTGWLAYPPLSGIDGSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM +M MPIF WT+LC+NILIVA+FP+LT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMPIFVWTSLCSNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEIVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VIT+LSY+VWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATAVITILSYLVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F+VP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 378 FTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++GI YWFPKAFGY+L+PFWGK SFWFW IGFY AFMPLYILG MG+TRR+S FE
Sbjct: 438 VVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYFAFMPLYILGLMGITRRISQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SFIIQLIVS+ KR  L D+TGDP+N RTLEWSTSSPP
Sbjct: 498 DNSLQIWFVIAAFGAFLIALGIASFIIQLIVSFLKRDQLRDVTGDPYNARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MKK  +  P D F  I MPKNT  G++IS  S+++GFALVW
Sbjct: 558 PQYNFAFTPVIHDVDAWHDMKKRGYSRPLDGFIPIHMPKNTGAGVIISAISVVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +SFI  + + I +TFNY R+YYI + +++ +E +R +L
Sbjct: 618 HIWWLAALSFIGVIAVSIAHTFNYNRDYYIPASDVSTVEAERTKL 662


>gi|424909086|ref|ZP_18332463.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. viciae USDA 2370]
 gi|392845117|gb|EJA97639.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. viciae USDA 2370]
          Length = 667

 Score =  903 bits (2334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+ G S GYLPP HY+QIFTAHGVIMIFF+AMP++TG++NF+V
Sbjct: 78  MLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPMITGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA++ MISLFIGE+A TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVITMISLFIGEYAQTGWLAYPPLSGIDGSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM +M MPIF WT+LC+NILIVA+FP+LT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMPIFVWTSLCSNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEIVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VIT+LSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATAVITILSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F+VP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 378 FTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++GI YWFPKAFGY+L+PFWGK SFWFW  GFY AFMPLYILG MG+TRR+S FE
Sbjct: 438 VVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFTGFYFAFMPLYILGLMGITRRLSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF+IQLIVS+ KR  L D+TGDP+NGRTLEWSTSSPP
Sbjct: 498 DNSLQIWFLIAAFGAFLIALGIASFVIQLIVSFLKRDKLRDVTGDPYNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MKK  +  P + F  I MPKNT  G++IS  S+++GFALVW
Sbjct: 558 PQYNFAFTPVIHDVDAWTDMKKRGYSRPLEGFIPIHMPKNTGSGVIISAISVVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L ++SFI  + + I +TFNY R YYI + +++ +E +R +L
Sbjct: 618 HIWWLAVLSFIGIVAVSIAHTFNYNREYYIPASDVSTVEAERTKL 662


>gi|222107119|ref|YP_002547910.1| cytochrome o ubiquinol oxidase subunit I [Agrobacterium vitis S4]
 gi|221738298|gb|ACM39194.1| cytochrome o ubiquinol oxidase subunit I [Agrobacterium vitis S4]
          Length = 667

 Score =  903 bits (2334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/585 (73%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++F  + G+LPP HY+Q+FTAHGVIMIFF+AMP VTG++N +V
Sbjct: 78  MLLRGFADALMMRGQQAMAFNGNEGFLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNLVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT  GA++VMISLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTVAGAVIVMISLFVGEFARTGWLAYPPLSGGDYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM +M MPIFTWT+LCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTMMKMPIFTWTSLCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 258 ATLALLTLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTMGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ +WFPKAFGYKL+PFWGK SFWFWL+GFY AFMPLY+LG MGVTRRMS F+
Sbjct: 438 VVFGLMAGVTFWFPKAFGYKLDPFWGKMSFWFWLVGFYFAFMPLYVLGLMGVTRRMSQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF+IQL+VSY KRH L D+TGDPWNGRTLEWS SSPP
Sbjct: 498 DPSLQIWFIIAAFGACLIALGIASFVIQLVVSYFKRHELADLTGDPWNGRTLEWSISSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+W  MKK  +  P   F+ I MPKNT  G++++  S+ M F L+W
Sbjct: 558 PAYNFAFTPVVHDTDAWDDMKKRGYSRPLLGFKPIHMPKNTGTGVILAGLSVAMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L I+SF+  + + I +TFNY R++YIS+EE+   E  R  L
Sbjct: 618 YMWWLAIVSFVAIVAVSISHTFNYNRDFYISAEEVVNTEATRTAL 662


>gi|395762533|ref|ZP_10443202.1| cytochrome o ubiquinol oxidase subunit I [Janthinobacterium lividum
           PAMC 25724]
          Length = 667

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/585 (73%), Positives = 500/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + G+LPP+HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFADALMMRTQQAIAFGDNAGFLPPDHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTAMGAALVMASLFVGEFARTGWLAYPPLSGIVGSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N+IATI+KMRAPGM  M MP+FTWTALCTNILIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGVNLIATIVKMRAPGMTWMKMPVFTWTALCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR  G +FFT +LGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVV+TFSS
Sbjct: 258 AVLAMLSLDRAAGFNFFTTELGGNAMMYVNLIWIWGHPEVYILILPLFGVFSEVVATFSS 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P+LWTIGFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMLWTIGFMVTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ + INYWFPKAFGYKL+ FWGKCSFWFWL+GFY+AFMPLY+LG MGVTRR++HFE
Sbjct: 438 VVFGVFAAINYWFPKAFGYKLDTFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIW  IA FG + IA+GI S +IQ +VSYR RH L D+TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWTIIAWFGAVSIALGIGSMLIQFVVSYRNRHALRDVTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H+ D+W  MKK+ ++ P   F  I MPKNT  G  I+  S  +GF L+W
Sbjct: 558 PDYNFAFTPQVHELDAWTDMKKHAYQRPTSGFMKIHMPKNTWAGFAIAALSAAVGFCLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MWL+  ISF+I LI +I +TFNYKR+YYI  EE+   E    +L
Sbjct: 618 QMWLVAGISFMIMLIAIIVHTFNYKRDYYIPVEEVIRTEDAYTKL 662


>gi|407775981|ref|ZP_11123272.1| quinol cytochrome oxidase polypeptide I [Thalassospira
           profundimaris WP0211]
 gi|407281053|gb|EKF06618.1| quinol cytochrome oxidase polypeptide I [Thalassospira
           profundimaris WP0211]
          Length = 669

 Score =  902 bits (2332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/586 (73%), Positives = 503/586 (85%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++FG S G+LPP+HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFSDALMMRAQQAMAFGGSEGFLPPDHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA L+M+SLF+GEFA TGWL YPPLS I  SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTCGAALIMVSLFVGEFAKTGWLAYPPLSDIVYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLVVTIVKMRAPGMSMMKMPVFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L  LDRY  T+FFTNDLGGN MMY+NLIWIWGHPEVYIL+LP FG+FSEVVSTF  
Sbjct: 258 AVLVLLGLDRYADTNFFTNDLGGNAMMYINLIWIWGHPEVYILILPAFGVFSEVVSTFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNW+
Sbjct: 318 KRLFGYSSMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKVFNWM 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+VP+LWTIGFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRISFDVPMLWTIGFMLTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YWFPKAFG+KL+PFWGK SFW WL+GFY AFMPLY+LG MG+TRRMS F+
Sbjct: 438 VVFGMFAGIVYWFPKAFGFKLDPFWGKMSFWLWLVGFYFAFMPLYVLGLMGITRRMSQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           D SLQIWF IAAFG LLIA GI SFI+ ++V+  KR  L D TGDPW +GRTLEWSTSSP
Sbjct: 498 DPSLQIWFVIAAFGALLIAGGIGSFILSIVVAVIKRDKLRDETGDPWGDGRTLEWSTSSP 557

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFAF P++H  D+W  MKK  +  P + F DI MPKNT  G +++  SL++GFALV
Sbjct: 558 PPAYNFAFTPVVHDLDAWADMKKRGYVRPTEGFLDIHMPKNTGAGFILAAISLVLGFALV 617

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L   SFI+ ++  I +TFNY R+Y+I + E+   E +R  L
Sbjct: 618 WHIWWLVAASFIVLIVGAIAHTFNYDRDYHIPASEVVETEDERTAL 663


>gi|150376512|ref|YP_001313108.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium medicae
           WSM419]
 gi|150031059|gb|ABR63175.1| Cytochrome o ubiquinol oxidase subunit I [Sinorhizobium medicae
           WSM419]
          Length = 669

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/584 (73%), Positives = 504/584 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA ++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTAAGAAIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWLIGFY AF+PLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLIGFYFAFIPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+  R  L D+TGDPW+GRTLEWS +SPP
Sbjct: 498 DPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFMNREKLRDMTGDPWDGRTLEWSIASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSWW MKK  ++ P   F+ I MPKNT  G+++   S++  FA+VW
Sbjct: 558 PDYNFAFTPLVHDQDSWWDMKKRGYERPLTGFKPIHMPKNTGTGVILGAISVVFAFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L I+SF+  ++I I +TFNY R++YI +  +   E KR  
Sbjct: 618 YMWWLAILSFVAMVVIAIGHTFNYDRDFYIPANVVADTEGKRAE 661


>gi|335032869|ref|ZP_08526241.1| cytochrome O ubiquinol oxidase subunit I [Agrobacterium sp. ATCC
           31749]
 gi|333795545|gb|EGL66870.1| cytochrome O ubiquinol oxidase subunit I [Agrobacterium sp. ATCC
           31749]
          Length = 667

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+ G S GYLPP HY+QIFTAHGVIMIFF+AMP++TG++NF+V
Sbjct: 78  MLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPMITGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI+ MISLF+GE+A TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFVGEYAQTGWLAYPPLSGIDGSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM +M MPIF WT+LC+NILIVA+FP+LT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMPIFVWTSLCSNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEIVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VIT+LSY+VWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATAVITILSYLVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F+VP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 378 FTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++GI YWFPKAFGY+L+PFWGK SFWFW +GFY AFMPLYILG MG+TRR+S FE
Sbjct: 438 VVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFVGFYFAFMPLYILGLMGITRRISQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SFIIQLIVS+ KR  L D+TGDP+N RTLEWSTSSPP
Sbjct: 498 DNSLQIWFVIAAFGAFLIALGIASFIIQLIVSFLKRDQLRDVTGDPYNARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MKK  +  P + F  I MPKNT  G++IS  S+++GFALVW
Sbjct: 558 PQYNFAFTPVIHDVDAWHDMKKRGYSRPLEGFIPIHMPKNTGAGVIISAISVVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +SFI  + + I +TFNY R+YYI + +++ +E +R +L
Sbjct: 618 HIWWLAALSFIGVIAVSIAHTFNYNRDYYIPASDVSTVEAERTKL 662


>gi|227820110|ref|YP_002824081.1| cytochrome O ubiquinol oxidase subunit I [Sinorhizobium fredii
           NGR234]
 gi|227339109|gb|ACP23328.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium fredii
           NGR234]
          Length = 667

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/585 (73%), Positives = 502/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFADAIMMRLQQAMAFGDSEGYLPPHHYDQIFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQVAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+GT+FFTNDLGG+ MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYVGTNFFTNDLGGDPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AAFG  LIA+GILS ++QL+VS+ KR  L D TGDPW+ RTLEWSTSSPP
Sbjct: 498 DPSLQIWFLVAAFGAFLIALGILSMLVQLVVSFIKREELRDTTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSWW MKK     P   F+ I MPKNT  G+++   S+   F ++W
Sbjct: 558 PDYNFAFTPVVHDQDSWWDMKKRGASRPISGFKPIHMPKNTGTGVILGAISVAFAFGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  +SF+  ++I I +TFNY R++YI S+ +T  E KR  L
Sbjct: 618 YMWWLAGLSFLAMVVIAIAHTFNYDRDFYIPSDVVTQTEGKRTEL 662


>gi|325291583|ref|YP_004277447.1| cytochrome ubiquinol oxidase subunit I [Agrobacterium sp. H13-3]
 gi|418407676|ref|ZP_12980993.1| cytochrome ubiquinol oxidase subunit I [Agrobacterium tumefaciens
           5A]
 gi|325059436|gb|ADY63127.1| cytochrome ubiquinol oxidase subunit I [Agrobacterium sp. H13-3]
 gi|358005662|gb|EHJ97987.1| cytochrome ubiquinol oxidase subunit I [Agrobacterium tumefaciens
           5A]
          Length = 667

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+ G S GYLPP HY+QIFTAHGVIMIFF+AMP++TG++NF+V
Sbjct: 78  MLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPMITGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA++ MISLFIGE+A TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVITMISLFIGEYAQTGWLAYPPLSGIDGSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM +M +PIF WT+LC+NILIVA+FP+LT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRLPIFVWTSLCSNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FG+FSE+VSTFS+
Sbjct: 258 GTLALLTLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGVFSEIVSTFSN 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VIT+L+YIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATGVITILAYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F+VP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 378 FTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++GI YWFPKAFGY+L+PFWGK SFWFW IGFY AFMPLYILG MGVTRR+S FE
Sbjct: 438 VVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYFAFMPLYILGLMGVTRRISQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF+IQLIVS+ KR  L D+TGDP++GRTLEWSTSSPP
Sbjct: 498 DNSLQIWFLIAAFGAFLIALGIASFVIQLIVSFLKRDQLRDVTGDPYHGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK  +  PK+ F  I MPKNT  G++IS  S+++GFALVW
Sbjct: 558 PAYNFAFTPVVHDVDAWADMKKRGYDRPKEGFIPIHMPKNTGAGVIISAISVVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +S +  + + I +TFNY R YYI + +++ +E +R +L
Sbjct: 618 HIWWLAALSMLAIIAVSIAHTFNYNREYYIPASDVSTVEAERTKL 662


>gi|418299149|ref|ZP_12910984.1| cytochrome ubiquinol oxidase subunit I [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355535443|gb|EHH04731.1| cytochrome ubiquinol oxidase subunit I [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 667

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+ G S GYLPP HY+QIFTAHGVIMIFF+AMP++TG++NF+V
Sbjct: 78  MLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPMITGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA++ MISLFIGE+A TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVITMISLFIGEYAQTGWLAYPPLSGIDGSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM +M +PIF WT+LC+NILIVA+FP+LT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRLPIFVWTSLCSNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FG+FSE+VSTFS+
Sbjct: 258 GTLALLTLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGVFSEIVSTFSN 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VIT+L+YIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATGVITILAYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F+VP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 378 FTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++GI YWFPKAFGY+L+PFWGK SFWFW IGFY AFMPLYILG MG+TRR+S FE
Sbjct: 438 VVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYFAFMPLYILGLMGITRRISQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF+IQLIVS+  R  L D+TGDP+NGRTLEWSTSSPP
Sbjct: 498 DNSLQIWFLIAAFGAFLIALGIASFVIQLIVSFLNRDKLRDVTGDPYNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MKK  +  PK+ F  I MPKNT  G++IS  S+++GFALVW
Sbjct: 558 PAYNFAFTPVIHDVDAWADMKKRGYNRPKEGFIPIHMPKNTGAGVIISAISVVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +S +  + + I +TFNY R+YYI + +++ +E +R +L
Sbjct: 618 HIWWLAALSMLAIIAVSIAHTFNYNRDYYIPASDVSTVEAERTKL 662


>gi|398351312|ref|YP_006396776.1| ubiquinol oxidase subunit 1 [Sinorhizobium fredii USDA 257]
 gi|390126638|gb|AFL50019.1| ubiquinol oxidase subunit 1 [Sinorhizobium fredii USDA 257]
          Length = 670

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/585 (73%), Positives = 501/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFADAIMMRLQQAMAFGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQVAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 ATLALLSLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWLIGFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLIGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+ KR  L D TGDPW+ RTLEWSTSSPP
Sbjct: 498 DPSLQIWFLIAAFGAFLIALGILSMLIQLVVSFVKREELRDTTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSWW MKK     P   F+ I MPKNT  G+++   S+   F ++W
Sbjct: 558 PDYNFAFTPVVHDQDSWWDMKKRGHSRPLAGFKPIHMPKNTGTGVILGAISVAFAFGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  +SF+  + I I +TFNY R++YI +E +   E KR  +
Sbjct: 618 YMWWLAGLSFLAMIAIAIGHTFNYDRDFYIPAEVVVETEGKRTEM 662


>gi|94314528|ref|YP_587737.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus metallidurans
           CH34]
 gi|93358380|gb|ABF12468.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus metallidurans
           CH34]
          Length = 667

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/585 (74%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQA++FG + G+LPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAVMMRMQQAVAFGDNAGFLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGAILVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAILVMMSLFVGEFARTGWLAYPPLSGILHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSGIN++ TI+KMRAPGM LM MPIFTWT+LCTN+LI+AAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGINLLVTIVKMRAPGMTLMRMPIFTWTSLCTNVLIIAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY GT+FFT D GG+ MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TF+ 
Sbjct: 258 AALALLALDRYAGTNFFTADQGGSAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFAR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWT+GFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTVGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFW +GFY AFMPLY LG +GVTRRM+HF+
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWFVGFYFAFMPLYWLGLLGVTRRMNHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG LLIA+GI  F+IQL+VS+ +R  L D TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAAFGALLIAIGIACFLIQLVVSFMRREELRDTTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW+MK N F+ P+  F  I MPK T  GI+++  S I GFAL+W
Sbjct: 558 PQYNFAFTPVVHDTDAWWHMKHNGFQRPQQGFIPIHMPKGTAAGIVLAGLSTICGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L I SF  T+I  I +TFNYKR+YYIS+E++   E  R +L
Sbjct: 618 HIWWLVIASFAATIIAAIIHTFNYKRDYYISAEQVVRTEAARTQL 662


>gi|384538552|ref|YP_005722636.1| utative cytochrome o ubiquinol oxidase chain I protein
           [Sinorhizobium meliloti SM11]
 gi|336037205|gb|AEH83135.1| utative cytochrome o ubiquinol oxidase chain I protein
           [Sinorhizobium meliloti SM11]
          Length = 669

 Score =  899 bits (2324), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/584 (73%), Positives = 501/584 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+ +R  L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRDTTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSWW MKK     P   F+ I MPKNT  G+++   S++  FA+VW
Sbjct: 558 PDYNFAFTPLVHDQDSWWDMKKRGHSRPLVGFKPIHMPKNTGTGVILGAISVVFAFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L I+SF+    I I +TFNY R+++I +  +   E KR  
Sbjct: 618 YMWWLVILSFVAMAAIAIRHTFNYDRDFHIPANVVADTEGKRTE 661


>gi|424920094|ref|ZP_18343457.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM597]
 gi|392849109|gb|EJB01631.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM597]
          Length = 667

 Score =  899 bits (2324), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   ++ P   F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYERPLGGFKPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L++ I +TFNY+R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVGLLVVAIGHTFNYRRDFHIPAEEVTETEGKRTAL 662


>gi|357030194|ref|ZP_09092157.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium amorphae
           CCNWGS0123]
 gi|355533002|gb|EHH02345.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium amorphae
           CCNWGS0123]
          Length = 670

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/585 (71%), Positives = 509/585 (87%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYL  +HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLNSQHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA++VM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTAGGAVIVMMSLFVGEFARTGWLAYPPLSGIGYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N++ TI+KMRAPGM +M MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLVCTIVKMRAPGMTMMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV STF  
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+VIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATIVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI+YWFPKAFG++L+PFWGK SFWFW++GF+ AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGISYWFPKAFGFRLDPFWGKMSFWFWVVGFWFAFMPLYVLGLMGVTRRLRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SL IWF IAAFG  LI +GI+SF+IQ+ VS R+R  L D TGDPW+GRTLEW+T+SPP
Sbjct: 498 DPSLHIWFIIAAFGAFLILLGIVSFLIQIFVSVRRREQLRDDTGDPWDGRTLEWATASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MK+  ++ P   F+DI MP+NT  G++++  S+++  ALVW
Sbjct: 558 PAYNFAFTPVIHDGDAWADMKQRGYRRPLTGFRDIHMPRNTGAGVILAGLSVVLAVALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L I+SF+  +   I +TFNY R+++I+S ++T +E +R RL
Sbjct: 618 YIWWLAIVSFVALIGYAIAHTFNYDRDFHIASGDVTHVEDERTRL 662


>gi|319786910|ref|YP_004146385.1| cytochrome o ubiquinol oxidase subunit I [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465422|gb|ADV27154.1| cytochrome o ubiquinol oxidase, subunit I [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 671

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/585 (72%), Positives = 498/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + GYLPP HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 81  MLLRGFADALMMRAQQAIAFGDNLGYLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYLV 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIG RDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VG+
Sbjct: 141 PLQIGTRDVAFPFLNNFSFWMTTAGAVLVMLSLFVGEFAKTGWLAYPPLSGIDYSPDVGM 200

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+I TI+KMRAPGM LM MP+FTWTALCTN+LIV +FPVLT
Sbjct: 201 DYYIWALQIAGVGTLLSGVNLIVTIVKMRAPGMTLMKMPVFTWTALCTNVLIVVSFPVLT 260

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LPVFGIFSE+VST+S 
Sbjct: 261 AVLALLSLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPVFGIFSEIVSTYSG 320

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYATV IT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 321 KRLFGYSSMVYATVCITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 380

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 381 FTMYRGRIRFEVPMLWTVGFMVTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 440

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL +G+ +WFPKAFG+KL  FWGK SFWFWL G++ AF PLY+LG MGVTRRMSHF 
Sbjct: 441 VVFGLFAGMTFWFPKAFGFKLNDFWGKMSFWFWLAGYWFAFTPLYVLGLMGVTRRMSHFT 500

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQ+AAFG +LIA+GI  F+I + VS+R R  L D+TGDPW+ R+LEWSTSSPP
Sbjct: 501 DPSLQIWFQVAAFGAVLIAIGIACFLICIFVSFRDREKLRDVTGDPWDARSLEWSTSSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+   K P   F  I MPKNT  G++I+  S    F L+W
Sbjct: 561 PEYNFAFTPVVHDNDAWWDMKQRGAKRPLSGFIPIHMPKNTAAGVVIAGLSTACAFGLIW 620

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L   +F  T++  I +TFNYKR+Y+I +E +   E  R  L
Sbjct: 621 HIWWLAGAAFAATVVASIVHTFNYKRDYHIPAETVAETEAARTEL 665


>gi|160899492|ref|YP_001565074.1| cytochrome o ubiquinol oxidase subunit I [Delftia acidovorans
           SPH-1]
 gi|160365076|gb|ABX36689.1| cytochrome o ubiquinol oxidase, subunit I [Delftia acidovorans
           SPH-1]
          Length = 645

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/584 (72%), Positives = 502/584 (85%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 58  MLLRGFADALMMRLQQAMAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 117

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L   AQ+PGVG+
Sbjct: 118 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--AQNPGVGL 175

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FP+LT
Sbjct: 176 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPILT 235

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FGIFSE+VSTFS 
Sbjct: 236 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPCFGIFSEIVSTFSR 295

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 296 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 355

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF VP+LWT+GFM TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 356 FTMYRGRIRFTVPMLWTVGFMCTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 415

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFGYKL+ FWGKCSFWFWL+GF+VAF PLY+LG MGVTRR +HFE
Sbjct: 416 VVFGVFAGINFWFPKAFGYKLDEFWGKCSFWFWLVGFWVAFTPLYVLGLMGVTRRANHFE 475

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  L+A+GI SF+IQL+VSY KR  L D+TGDPW GRTLEW+TSSPP
Sbjct: 476 DPSLQIWFVIAALGAGLVALGIGSFLIQLVVSYFKRDQLRDVTGDPWEGRTLEWATSSPP 535

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MKK+ ++ P   F+ + MP NT  G++I+  S + GFA++W
Sbjct: 536 PQYNFAFTPVVHEIDAWWDMKKHGYQRPLTGFKPVHMPSNTGAGVVIAALSTVFGFAMIW 595

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW L I SF  T++  I +TFNYKR+YYI + E+   E+ R +
Sbjct: 596 HMWPLAIASFAATVLASIIHTFNYKRDYYIPAAEVAATEELRTQ 639


>gi|116255241|ref|YP_771074.1| putative ubiquinol oxidase polypeptide I [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|424875295|ref|ZP_18298957.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. viciae WSM1455]
 gi|115259889|emb|CAK02983.1| putative ubiquinol oxidase polypeptide I [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|393170996|gb|EJC71043.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. viciae WSM1455]
          Length = 667

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L++ I +TFNY R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVAMLVVAIGHTFNYGRDFHIPAEEVTETEGKRTAL 662


>gi|121595097|ref|YP_986993.1| cytochrome-c oxidase [Acidovorax sp. JS42]
 gi|120607177|gb|ABM42917.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Acidovorax sp.
           JS42]
          Length = 646

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/584 (73%), Positives = 494/584 (84%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 58  MFLRGFADAVMMRLQQAMAVGESMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 117

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L   AQ PGVG+
Sbjct: 118 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--AQDPGVGL 175

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 176 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPVLT 235

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRYIGT+FFTNDLGGN M+YVNLIWIWGHPEVYILVLP FG+FSEVV+TFS 
Sbjct: 236 AALVLMSLDRYIGTNFFTNDLGGNSMLYVNLIWIWGHPEVYILVLPAFGVFSEVVATFSR 295

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA VN FFGITTMIISIPTGAKIFNWL
Sbjct: 296 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGATVNTFFGITTMIISIPTGAKIFNWL 355

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF VP+LWT+GFM TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 356 FTMYKGRIRFSVPMLWTVGFMCTFAIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 415

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYW+PKAFGYKL+ FWGKCSFWFWL+GF+VAF PLYILG MGVTRR+SHFE
Sbjct: 416 VVFAVFAGINYWYPKAFGYKLDEFWGKCSFWFWLVGFWVAFTPLYILGLMGVTRRVSHFE 475

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI SF IQLIVSY KR  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 476 DPSLQIWFIIAACGAGLIALGIASFFIQLIVSYLKRDQLRDVTGDPWDARTLEWATSSPP 535

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+ H+ D+WW MKK+ ++ P   FQ I MP NT  G++I+  S + GFA++W
Sbjct: 536 PQYNFAFTPVAHEIDAWWDMKKHGYQRPLTGFQPIHMPANTGAGVVIAALSTLFGFAMIW 595

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW L I SF   ++  I +TFNYKR+YYI + ++   E  R +
Sbjct: 596 HMWPLAIASFAAIVLASIIHTFNYKRDYYIPAADVAATEDARTK 639


>gi|424891687|ref|ZP_18315270.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM2297]
 gi|393185682|gb|EJC85718.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM2297]
          Length = 667

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/585 (72%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+QIFTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIVIMMSLFVGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L + I +TFNY+R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVAMLAVAIGHTFNYRRDFHIPAEEVTETEGKRTAL 662


>gi|384534333|ref|YP_005716997.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium meliloti
           BL225C]
 gi|407723000|ref|YP_006842661.1| ubiquinol oxidase subunit I [Sinorhizobium meliloti Rm41]
 gi|433610561|ref|YP_007194022.1| cytochrome o ubiquinol oxidase, subunit I [Sinorhizobium meliloti
           GR4]
 gi|333816509|gb|AEG09176.1| cytochrome o ubiquinol oxidase, subunit I [Sinorhizobium meliloti
           BL225C]
 gi|407323060|emb|CCM71661.1| Ubiquinol oxidase subunit 1 [Sinorhizobium meliloti Rm41]
 gi|429555503|gb|AGA10423.1| cytochrome o ubiquinol oxidase, subunit I [Sinorhizobium meliloti
           GR4]
          Length = 669

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/584 (73%), Positives = 501/584 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+ +R  L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRDTTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSWW MKK     P   F+ I MPKNT  G+++   S++  FA+VW
Sbjct: 558 PDYNFAFTPLVHDQDSWWDMKKRGHSRPLVGFKPIHMPKNTGTGVILGAISVVFAFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L I+SF+    I I +TFNY R+++I +  +   E KR  
Sbjct: 618 YMWWLVILSFVAMAAIAIGHTFNYDRDFHIPANVVADTEGKRTE 661


>gi|333914378|ref|YP_004488110.1| cytochrome o ubiquinol oxidase subunit I [Delftia sp. Cs1-4]
 gi|333744578|gb|AEF89755.1| cytochrome o ubiquinol oxidase, subunit I [Delftia sp. Cs1-4]
          Length = 668

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/584 (72%), Positives = 502/584 (85%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 81  MLLRGFADALMMRLQQAMAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L   AQ+PGVG+
Sbjct: 141 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--AQNPGVGL 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FP+LT
Sbjct: 199 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPILT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FGIFSE+VSTFS 
Sbjct: 259 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPCFGIFSEIVSTFSR 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 319 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF VP+LWT+GFM TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 379 FTMYRGRIRFTVPMLWTVGFMCTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFGYKL+ FWGKCSFWFWL+GF+VAF PLY+LG MGVTRR +HFE
Sbjct: 439 VVFGVFAGINFWFPKAFGYKLDEFWGKCSFWFWLVGFWVAFTPLYVLGLMGVTRRANHFE 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  L+A+GI SF+IQL+VSY KR  L D+TGDPW GRTLEW+TSSPP
Sbjct: 499 DPSLQIWFVIAALGAGLVALGIGSFLIQLVVSYFKRDQLRDVTGDPWEGRTLEWATSSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MKK+ ++ P   F+ + MP NT  G++I+  S + GFA++W
Sbjct: 559 PQYNFAFTPVVHEIDAWWDMKKHGYQRPLTGFKPVHMPSNTGAGVVIAALSTVFGFAMIW 618

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW L I SF  T++  I +TFNYKR+YYI + E+   E+ R +
Sbjct: 619 HMWPLAIASFAATVLASIIHTFNYKRDYYIPAAEVAATEELRTQ 662


>gi|421591644|ref|ZP_16036465.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium sp. Pop5]
 gi|403702862|gb|EJZ19273.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium sp. Pop5]
          Length = 667

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 504/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS F+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AAFG  LIA+GI SF+IQ++VS+ KR  L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIVAAFGVGLIALGIASFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P++H  DSW+ MK   ++ P   F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PEYNFALTPVVHDHDSWYDMKNRGYERPLGGFKPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L + SF+  L++ I +TFNYKR++YI +E +T  E KR  L
Sbjct: 618 YMWWLVVASFVALLVVAIGHTFNYKRDFYIPAENVTETEGKRTAL 662


>gi|16265064|ref|NP_437856.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium meliloti
           1021]
 gi|15141203|emb|CAC49716.1| putative cytochrome o ubiquinol oxidase chain I protein
           [Sinorhizobium meliloti 1021]
          Length = 669

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/584 (73%), Positives = 501/584 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W LQIAGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYVWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+ +R  L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRDTTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSWW MKK     P   F+ I MPKNT  G+++   S++  FA+VW
Sbjct: 558 PDYNFAFTPLVHDQDSWWDMKKRGHSRPLVGFKPIHMPKNTGTGVILGAISVVFAFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L I+SF+    I I +TFNY R+++I +  +   E KR  
Sbjct: 618 YMWWLVILSFVAMAAIAIGHTFNYDRDFHIPANVVADTEGKRTE 661


>gi|241667022|ref|YP_002985106.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240862479|gb|ACS60144.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 667

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/585 (72%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MP+NT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPRNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L++ I +TFNY R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVAMLVVAIGHTFNYGRDFHIPAEEVTETEGKRTAL 662


>gi|424878112|ref|ZP_18301752.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WU95]
 gi|392520604|gb|EIW45333.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WU95]
          Length = 667

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/585 (72%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MP+NT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPRNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L++ I +TFNY R+++I +EE+T  E +R  L
Sbjct: 618 YMWWLVVVSFVAMLVVAISHTFNYGRDFHIPAEEVTETEGRRTAL 662


>gi|334320351|ref|YP_004556980.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium meliloti
           AK83]
 gi|334098090|gb|AEG56100.1| cytochrome o ubiquinol oxidase, subunit I [Sinorhizobium meliloti
           AK83]
          Length = 669

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/584 (73%), Positives = 500/584 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIIS PTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISTPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+ +R  L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRDTTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSWW MKK     P   F+ I MPKNT  G+++   S++  FA+VW
Sbjct: 558 PDYNFAFTPLVHDQDSWWDMKKRGHSRPLVGFKPIHMPKNTGTGVILGAISVVFAFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L I+SF+    I I +TFNY R+++I +  +   E KR  
Sbjct: 618 YMWWLVILSFVAMAAIAIGHTFNYDRDFHIPANVVADTEGKRTE 661


>gi|402487307|ref|ZP_10834128.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium sp. CCGE 510]
 gi|401813790|gb|EJT06131.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium sp. CCGE 510]
          Length = 667

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/585 (72%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRVQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRM+ F+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRMNQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   +  P + F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPKNTGTGAILSGISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L++ I +TFNY+R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVGLLVVAIGHTFNYRRDFHIPAEEVTETEGKRTAL 662


>gi|339322295|ref|YP_004681189.1| ubiquinol oxidase subunit 1 [Cupriavidus necator N-1]
 gi|338168903|gb|AEI79957.1| ubiquinol oxidase subunit 1 [Cupriavidus necator N-1]
          Length = 667

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/584 (73%), Positives = 503/584 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++NF++
Sbjct: 78  MLLRGFADAVMMRIQQAVAFGDNLGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGAILVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTGGAILVMMSLFVGEFARTGWLAYPPLSGIIHSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSGIN++ TI+KMRAPGM LM MPIFTWTALCTN+LI+AAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNVLIIAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY GT+FFT + GG+ MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TF  
Sbjct: 258 AALALLALDRYAGTNFFTTEQGGSAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+IRFE P+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGKIRFEPPMLWTIGFMVTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+GI YWFPKAFGY+L   WGK SFWFWL+GFY AFMPLY LG  GVTRRMSHFE
Sbjct: 438 VLFGLMAGITYWFPKAFGYRLVSSWGKASFWFWLVGFYFAFMPLYWLGLHGVTRRMSHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + Q+WFQ+AAFG LLIA+GI  F++QL+VS+  R  L D+TGDPWNGRTLEWSTSSPP
Sbjct: 498 DATYQVWFQLAAFGALLIAIGIACFLVQLVVSFIHREELRDLTGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW+MK+N +  P+  F  I MPKNT  GI+++ FS + GFAL+W
Sbjct: 558 PQYNFAFTPVVHDTDAWWHMKQNGYARPQQGFIPIHMPKNTAAGIVLAGFSTLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L   +F  T+I  I +TFNYKR+YY+ ++ +   E  R +
Sbjct: 618 HIWWLAAAAFAATIIGAIIHTFNYKRDYYLPADLVIQTEAARTQ 661


>gi|163857709|ref|YP_001632007.1| cytochrome ubiquinol oxidase subunit I [Bordetella petrii DSM
           12804]
 gi|163261437|emb|CAP43739.1| cytochrome ubiquinol oxidase subunit I [Bordetella petrii]
          Length = 667

 Score =  896 bits (2316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/585 (73%), Positives = 503/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG S GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRTQQAIAFGESAGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  GA+LVM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVVGAVLVMMSLFVGEFARTGWLAYPPLSGILNSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TI+KMRAPGM +M MPIFTWTALCTN+LIV +FPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLVTIVKMRAPGMNMMRMPIFTWTALCTNVLIVVSFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L  LDRY+GT+FFT D GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V TF  
Sbjct: 258 AVLALLALDRYLGTNFFTADGGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSEIVPTFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRIRFEVP+LWTIGFM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMFRGRIRFEVPMLWTIGFMVTFVIGGMTGVLLAVPPADFALHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL +GI YWFPKAFGY+L+P+WGK SFW WL+GFYVAFMPLY+LG +GVTRRM+HF+
Sbjct: 438 VVFGLFAGITYWFPKAFGYRLDPYWGKWSFWLWLVGFYVAFMPLYVLGLLGVTRRMNHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G LLIA GI  F+IQL VS+++R  L D TGDPWN RTLEWSTSSPP
Sbjct: 498 DGSLQIWFQIAALGALLIAGGIACFLIQLYVSFKRRDALRDHTGDPWNARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YN+AF PL+H  D+WW MK+  +  P+  F  I MP NT  GI+++  S++MGFAL+W
Sbjct: 558 PPYNYAFTPLVHDRDAWWQMKQLGYTRPQSGFIPIHMPSNTWAGIVLAGISMVMGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMW L I+SF   + + I++TF+Y R+YY+ ++++   E  R RL
Sbjct: 618 HMWPLAILSFAAVIGVAIFHTFDYNRDYYVPADDVARCEADRTRL 662


>gi|378763322|ref|YP_005191938.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium fredii
           HH103]
 gi|365182950|emb|CCE99799.1| cytochrome o ubiquinol oxidase subunit I [Sinorhizobium fredii
           HH103]
          Length = 667

 Score =  896 bits (2316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 501/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYLPP HY+QIFTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFADAIMMRLQQAMAFGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQVAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+GT+FFTNDLGG+ MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYVGTNFFTNDLGGDPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+PFWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS ++QL+VS+ +R  L D TGDPW+ RTLEWSTSSPP
Sbjct: 498 DPSLQIWFLIAAFGAFLIALGILSMLVQLVVSFIRREELRDTTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSWW MKK     P   F+ I MP+NT  G+++   S+   F ++W
Sbjct: 558 PDYNFAFTPVVHDQDSWWDMKKRGASRPLSGFKPIHMPRNTGTGVILGAISVAFAFGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  +SF+  + I I +TFNY R++YI ++ +T  E KR  L
Sbjct: 618 YMWWLAGLSFLAMVAIAIGHTFNYDRDFYIPADVVTETEGKRTEL 662


>gi|418399326|ref|ZP_12972876.1| cytochrome o ubiquinol oxidase, subunit I [Sinorhizobium meliloti
           CCNWSX0020]
 gi|359506711|gb|EHK79223.1| cytochrome o ubiquinol oxidase, subunit I [Sinorhizobium meliloti
           CCNWSX0020]
          Length = 669

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/584 (73%), Positives = 500/584 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYLPP HY+Q+FTAHGVIMIFF+AMP VTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQVFTAHGVIMIFFMAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA FPVLT
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLIATIVKMRAPGMTMMKMPVFTWTSLCTNVLIVATFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 ATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YWFPKAFG++L+ FWGK SFWFWL GFY AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVLYWFPKAFGFRLDAFWGKMSFWFWLTGFYFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GILS +IQL+VS+ +R  L D TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFVIAAFGAFLIALGILSMLIQLVVSFVRREELRDTTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H  DSWW MKK     P   F+ I MPKNT  G+++   S++  FA+VW
Sbjct: 558 PDYNFAFTPLVHDQDSWWDMKKRGHSRPLAGFKPIHMPKNTGTGVILGAISVVFAFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L I+SF+    I I +TFNY R+++I +  +   E KR  
Sbjct: 618 YMWWLVILSFVAMAAIAIGHTFNYDRDFHIPANVVADTEGKRTE 661


>gi|417858521|ref|ZP_12503578.1| cytochrome O ubiquinol oxidase subunit I [Agrobacterium tumefaciens
           F2]
 gi|338824525|gb|EGP58492.1| cytochrome O ubiquinol oxidase subunit I [Agrobacterium tumefaciens
           F2]
          Length = 667

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+ G S GYLPP HY+QIFTAHGVIMIFF+AMP++TG++NF+V
Sbjct: 78  MLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHGVIMIFFMAMPMITGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA++ MISLFIGE+A TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVITMISLFIGEYAQTGWLAYPPLSGIDGSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM +M +PIF WT+LC+NILIVA+FP+LT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRLPIFVWTSLCSNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FG+FSE+VSTFS+
Sbjct: 258 GTLALLTLDRYVGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGVFSEIVSTFSN 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VIT+L+Y+VWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATGVITILAYVVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F+VP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 378 FTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++GI YWFPKAFGY+L+PFWGK SFWFW IGFY AFMPLYILG MGVTRR+S FE
Sbjct: 438 VVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYFAFMPLYILGLMGVTRRISQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF+IQLIVS+ KR  L D+TGDP++GRTLEWSTSSPP
Sbjct: 498 DNSLQIWFVIAAFGAFLIALGIASFVIQLIVSFLKRDQLRDVTGDPYHGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK  +  P + +  I MPKNT  G++IS  S+++GFALVW
Sbjct: 558 PAYNFAFTPVVHDVDAWADMKKRGYVRPLEGYIPIHMPKNTGAGVIISAISVVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +S +  + + I +TFNY R YYI + +++ +E +R +L
Sbjct: 618 HIWWLAALSMLAIIAVSIAHTFNYNREYYIPASDVSTVEAERTKL 662


>gi|398836646|ref|ZP_10593978.1| cytochrome o ubiquinol oxidase, subunit I [Herbaspirillum sp.
           YR522]
 gi|398211127|gb|EJM97750.1| cytochrome o ubiquinol oxidase, subunit I [Herbaspirillum sp.
           YR522]
          Length = 667

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/585 (72%), Positives = 507/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG + G+LPP HY+Q+FTAHGVIMIFFVAMPLVTG++N+++
Sbjct: 78  MLLRGFADALMMRAQQAVAFGDNPGFLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVI 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTFGALLVMASLFVGEFARTGWLAYPPLSGILFSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSGIN++ TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGINLVVTIVKMRAPGMNMMKMPVFTWTSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + ++DR  GT+FFTND+GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+VSTFS 
Sbjct: 258 AVLAMLSMDRVFGTNFFTNDMGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSEIVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWTIGFMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GIN+WFPKAFG+KL  FWG+CSFWFWL+GFY+AFMPLY+LG MGVTRR+SHF+
Sbjct: 438 VVFGMFAGINFWFPKAFGFKLNDFWGRCSFWFWLVGFYLAFMPLYVLGLMGVTRRLSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF  AA G  LIA+GI SFIIQ+ VS R R  L D+TGDPW+ RTLEWSTSSPP
Sbjct: 498 DPSLQIWFVAAALGAGLIALGIASFIIQIAVSIRDRKKLADVTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+W  MKK+ ++ P  +F DI MPKNT  G +I+  + ++GF L+W
Sbjct: 558 PAYNFAFTPVVHDNDAWTDMKKHGYQRPLGEFVDIHMPKNTGAGFIIAALAAVIGFTLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           HMWL   + F   ++  I +TFNY R+YYI ++E+  +E +R RL
Sbjct: 618 HMWLPAAVFFAALVVATIVHTFNYNRDYYIPADEVVRVEAERTRL 662


>gi|405381186|ref|ZP_11035017.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. CF142]
 gi|397322373|gb|EJJ26780.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. CF142]
          Length = 667

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  + G LPP HY+QIFTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRVQQAIAFNGNEGPLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++MISLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMISLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTNILIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF+IQ++VS+ +R  L D +GDPWNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIASFLIQIVVSFMRREELRDDSGDPWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   ++ P   F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYERPLGGFKPIHMPKNTGTGAILSAISIALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++S +  L++ I +TFNY R++YI ++E+T  E KR +L
Sbjct: 618 YMWWLVVVSAVAMLVVAIGHTFNYNRDFYIPADEVTETEGKRTQL 662


>gi|209546366|ref|YP_002278256.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209539223|gb|ACI59156.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 667

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/585 (72%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRIQQAIAFNGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRM+ F+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMNQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDTGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P++H  DSW+ MK   +  P + F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFALTPVVHDHDSWYDMKNRGYARPLEGFRPIHMPKNTGTGAILSGISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SF+  L++ I +TFNY+R+++I +EE+T  E KR  L
Sbjct: 618 YMWWLVVVSFVGLLVVAIGHTFNYRRDFHIPAEEVTETEGKRTAL 662


>gi|288962727|ref|YP_003453021.1| cytochrome o ubiquinol oxidase subunit I [Azospirillum sp. B510]
 gi|288914993|dbj|BAI76477.1| cytochrome o ubiquinol oxidase subunit I [Azospirillum sp. B510]
          Length = 665

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/585 (71%), Positives = 501/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++F  S GYL   H++Q+FTAHGVIMIFFVAMP VTG++N++V
Sbjct: 76  MLLRGFADAIMMRAQQAMAFNGSEGYLNSHHFDQVFTAHGVIMIFFVAMPFVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+L+M SLFIGEFA TGWL YPPLSG+  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLIMASLFIGEFARTGWLAYPPLSGLEASPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TIIKMRAPGM +M MP+FTWT+LCTN+LIVA+FP+LT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIIKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GTHFFTND+GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV +TF  
Sbjct: 256 AVLVLLSLDRYVGTHFFTNDMGGNPMMYVNLIWIWGHPEVYILILPCFGIFSEVTATFCG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 316 KKLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YW+PKAFG++L+PFWGK SFWFW+IGFY AFMPLY+LG MGVTRR+  FE
Sbjct: 436 VLFGLFAGIYYWWPKAFGFRLDPFWGKMSFWFWVIGFYFAFMPLYVLGLMGVTRRLRVFE 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG +LIA+GI SF+IQ+ VS  KR  L+D++GDPW GRTLEW+TSSPP
Sbjct: 496 DPSLQIWFQIAAFGAVLIALGIGSFLIQIAVSILKRRQLVDVSGDPWGGRTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MKK  +  P D F+ I MP NT  GI+++  S  +GF ++W
Sbjct: 556 PDYNFAFTPVIHDNDAWWDMKKRGYARPLDGFRPIHMPSNTGTGIILAGISTALGFGMIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L  +SF+  L + I +TFNY R+++I  +E+   E +R RL
Sbjct: 616 HIWWLAALSFVGLLAVAINHTFNYNRDFHIPVDEVVRTETERTRL 660


>gi|149926918|ref|ZP_01915177.1| cytochrome c oxidase, subunit I [Limnobacter sp. MED105]
 gi|149824470|gb|EDM83688.1| cytochrome c oxidase, subunit I [Limnobacter sp. MED105]
          Length = 640

 Score =  893 bits (2308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/585 (71%), Positives = 501/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQAI+F  + G+LPP HY+QIFTAHGVIMIFFVAMPL+TG++N+++
Sbjct: 51  MMMRGFADAIMMRAQQAIAFNGNEGFLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNYLI 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA L+M SLF+GEFA TGWL YPPLSG+ QSP VGV
Sbjct: 111 PLQIGARDVAFPFLNNFSFWMTAMGAALIMASLFVGEFAMTGWLAYPPLSGVLQSPYVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+I T+IKMRAPGM +M MPIFTWT+LC N+LIVAAFPVLT
Sbjct: 171 DYYIWALQIAGVGTLLSGVNLIVTVIKMRAPGMTMMKMPIFTWTSLCANVLIVAAFPVLT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + T+DRY+GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTFS 
Sbjct: 231 AVLGMLTMDRYLGTNFFTNDLGGNSMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFSR 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYATVVIT+LSY+VWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 291 KRLFGYSSMVYATVVITILSYLVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I FE+P++WTI FMITFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYKGKISFELPMMWTIAFMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + IN+W PKA G KL+ FWGK SFWFW++GFY AFMPLY+LG MGVTRRMS FE
Sbjct: 411 VLFGLFAAINFWAPKAIGVKLDEFWGKVSFWFWVVGFYFAFMPLYVLGLMGVTRRMSQFE 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G  +IA+GI + ++Q  V++R R  L D TGDPW GRTLEW+TSSPP
Sbjct: 471 DPSLQIWFQIAALGAAMIAVGIAAMLMQFYVTFRDRAKLRDTTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNFAF P+++ +D+W  MKKN +K P++ F DI MPKNT  G++I+  S ++GFALVW
Sbjct: 531 ADYNFAFTPVVYDTDAWADMKKNGYKRPQEGFVDIHMPKNTAAGVVIAGISAVIGFALVW 590

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           H+W L     +  ++ VI +TFNYKR++YI ++E+   E  R +L
Sbjct: 591 HIWWLAAGGSVALVVAVIAHTFNYKRDFYIKADEVARTEAARTKL 635


>gi|395004859|ref|ZP_10388835.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax sp. CF316]
 gi|394317204|gb|EJE53806.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax sp. CF316]
          Length = 646

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/584 (72%), Positives = 499/584 (85%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 58  MLLRGFADALMMRLQQAMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYLV 117

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAILVM+SLF+GEF++ GWL    L   AQ+PGVG+
Sbjct: 118 PLQIGARDVSFPFLNNFSFWMTTAGAILVMVSLFLGEFSTAGWLALSNLG--AQNPGVGL 175

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TIIKMRAPGM LM MPIFTWTALCTN LIVA+FPVLT
Sbjct: 176 DYYIWALQIAGVGTTLSGINLIVTIIKMRAPGMNLMRMPIFTWTALCTNALIVASFPVLT 235

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN M+YVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 236 AALVLMSLDRYAGTNFFTNDLGGNAMLYVNLIWIWGHPEVYILILPCFGIFSEVVATFCK 295

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 296 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 355

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P+LWT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 356 FTMYKGRIRFELPMLWTLAFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 415

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYW+PKAFGYKL+ FWG CSFW W++GFYVAFMPLYILG MGVTRR +HFE
Sbjct: 416 VLFGLFAGINYWYPKAFGYKLDRFWGLCSFWLWVVGFYVAFMPLYILGLMGVTRRANHFE 475

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI   +IQ++VSY KR  L D TGDPW+ RTLEW+TSSPP
Sbjct: 476 DPSLQIWFVIAAIGAGLIALGIGCLLIQIVVSYLKRDQLRDHTGDPWDARTLEWATSSPP 535

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +++ D+WW MKK+ +  P   FQ I MP NT  G++IS  SL++GFAL+W
Sbjct: 536 PDYNFAFTPKVYEIDAWWDMKKHAYARPLTGFQPIHMPANTGAGVIISALSLVLGFALIW 595

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMWLL  +SF   +++ I +TFNYKR++YI + ++T  E  R +
Sbjct: 596 HMWLLAGLSFAGVVLVSIIHTFNYKRDFYIPAAQVTETENLRTQ 639


>gi|392383875|ref|YP_005033071.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Azospirillum brasilense Sp245]
 gi|356880590|emb|CCD01554.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Azospirillum brasilense Sp245]
          Length = 668

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/585 (71%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+FG S GYL   HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 79  MLLRGFADAIMMRLQQAIAFGGSEGYLNAHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+L+M+SLF+GEFA TGWL YPPLS IA SP  GV
Sbjct: 139 PLQIGARDVSFPFLNNFSFWMTVGGAVLIMVSLFVGEFARTGWLAYPPLSNIAYSPETGV 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FP+LT
Sbjct: 199 DYYIWALQIAGVGTTLSGINLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPILT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTNDLGG+ MMYVNLIWIWGHPEVYIL+LPVFGIFSEV STFS 
Sbjct: 259 ATLVLLSLDRYVGTNFFTNDLGGSPMMYVNLIWIWGHPEVYILILPVFGIFSEVTSTFSG 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 319 KKLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 379 FTMYRGRIRFELPMMWTVAFMLTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YW+PKAFG++L+PFWGK SFW W+IGF+VAFMPLY+LG MGVTRR+  FE
Sbjct: 439 VLFGLFAGIYYWWPKAFGFRLDPFWGKVSFWCWVIGFWVAFMPLYVLGLMGVTRRLRVFE 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAA G +LIA GI +F++Q+ VS  KR  L+D TGDPW+GRTLEW+TSSPP
Sbjct: 499 DPSLQIWFQIAAVGAVLIAAGIGAFLLQIAVSVWKRRELVDRTGDPWDGRTLEWATSSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MKK  +K P   FQ I MP N+  G++++  S+++GFAL+W
Sbjct: 559 PDYNFAFTPMIHDNDAWWDMKKRGYKRPLGGFQAIHMPSNSGTGVILAGISVVLGFALIW 618

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SF+  L   I++TFNY R+++I ++ +   E +R RL
Sbjct: 619 YIWWLAAVSFVALLATAIHHTFNYHRDFHIPADVVVRTENERTRL 663


>gi|365093724|ref|ZP_09330785.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax sp. NO-1]
 gi|363414208|gb|EHL21362.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax sp. NO-1]
          Length = 667

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/582 (72%), Positives = 498/582 (85%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 80  MLLRGFADAVMMRLQQAMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM+SLF+GEF++ GWL    L    Q+PGVG+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMVSLFLGEFSTAGWLALSNLGN--QNPGVGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWALQIAGVGTTLSGINLIVTIIKMRAPGMNLMRMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRYIGT+FFTNDLGGN M+YVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 AALVLMSLDRYIGTNFFTNDLGGNAMLYVNLIWIWGHPEVYILILPCFGIFSEVVATFCK 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMMWTVAFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYW+PKAFGYKL+  WG  SFW W++GF+VAF PLY+LG MGVTRR +HFE
Sbjct: 438 VLFGLFAGINYWYPKAFGYKLDRTWGVRSFWLWVVGFWVAFGPLYVLGLMGVTRRANHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG  LIA+GI  F+IQ++VSY KR  L D TGDPW+GRTLEW+TSSPP
Sbjct: 498 DQSLQIWFQIAAFGAFLIALGIACFLIQIVVSYLKRDQLRDWTGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MKK+ ++ P   F  I MP NT  G +IS  SL++GFAL+W
Sbjct: 558 PDYNFAFTPVVHEIDAWWDMKKHGYQRPLTGFAPIHMPANTASGAVISALSLLVGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           HMWLL  +SF   L+  I +TFNYKR++YI + ++   E+ R
Sbjct: 618 HMWLLAGVSFAALLLASIIHTFNYKRDFYIPASQVVATEEAR 659


>gi|188584039|ref|YP_001927484.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium populi
           BJ001]
 gi|179347537|gb|ACB82949.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium populi
           BJ001]
          Length = 667

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/584 (70%), Positives = 493/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQAI+FG++ GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFADALLMRSQQAIAFGANEGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  GA+ +MISLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVSGAVTIMISLFVGEFARTGWLAYPPLSGADMSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN++ATI+KMRAPGM +M +PIFTWT+LCTN+LIVAAFP+L 
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLVATIVKMRAPGMSMMKLPIFTWTSLCTNVLIVAAFPILG 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+GTHFFTNDLGGN MMY NLIWIWGHPEVYIL+LP FG+FSEV S F  
Sbjct: 258 AVLVLLTLDRYVGTHFFTNDLGGNPMMYFNLIWIWGHPEVYILILPAFGVFSEVTSAFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF+VP+LWT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFDVPMLWTVSFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG++L+ FWGK SFWFW IGFYVAFMPLY+LG MGVTRR  HF+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFRLDEFWGKVSFWFWTIGFYVAFMPLYVLGLMGVTRRAQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ WF +AA G  LIA+GI + I+Q  VS + R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQPWFVVAAIGAGLIALGIGAMIVQFAVSIKNREKLRDVTGDPWQGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+WW MK   F+ P   ++ I MPKNT  G+++   S+   FA++W
Sbjct: 558 PDYNFAFTPVVHGLDAWWEMKARGFQRPTSGYKPIHMPKNTATGVILGAISIAFSFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  ++F+ TL++ I +TFNY R++YI ++ +   E++R  
Sbjct: 618 YIWWLAALAFVATLVVAIGHTFNYNRDFYIPADTVARTEQRRTE 661


>gi|295691075|ref|YP_003594768.1| cytochrome o ubiquinol oxidase subunit I [Caulobacter segnis ATCC
           21756]
 gi|295432978|gb|ADG12150.1| cytochrome o ubiquinol oxidase, subunit I [Caulobacter segnis ATCC
           21756]
          Length = 665

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/584 (72%), Positives = 496/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG   GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N +V
Sbjct: 76  MLLRGFADALMMRAQQAMAFGEVAGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNLVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P+QIGARDVAFPFLNN SFWMT GGA+LVM SLF+GEFA TGWL YPPLS +A SP VGV
Sbjct: 136 PMQIGARDVAFPFLNNFSFWMTVGGAVLVMASLFVGEFARTGWLAYPPLSNLAYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN++ TIIKMRAPGM LM MP+FTWT+LCTN+LIVA FP+LT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLVVTIIKMRAPGMSLMKMPVFTWTSLCTNVLIVATFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+ T+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVVSTF  
Sbjct: 256 ATLALLTADRYLLTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGVFSEVVSTFCG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT VIT+LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 316 KRLFGYSSMVYATAVITILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFEVPMLWTVGFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GINYWFPKAFG+KL+PFWGK SFW WLIGF+VAF PLY+LG MGVTRR+SHFE
Sbjct: 436 VVFGMFAGINYWFPKAFGFKLDPFWGKVSFWCWLIGFWVAFTPLYVLGLMGVTRRVSHFE 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G +++  GIL+F++Q+ VS R R  L D TGDPW GRTLEWSTSSPP
Sbjct: 496 DPSLQIWFVIAAIGAVIVLFGILAFLVQIFVSIRNREALRDTTGDPWGGRTLEWSTSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++HQ D+WW MK+  ++ P   F  I MP NT  G++++  S ++GFAL+W
Sbjct: 556 PAYNFAFTPVVHQLDAWWDMKQRGYERPTAGFIPIHMPANTGAGVVLAGISTVLGFALIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L  ++F+  +   I +TFN+KR+YYI +EE+  +E  R  
Sbjct: 616 HVWWLAAVAFVALIGGAIAHTFNFKRDYYIPAEEVVRVEDARTE 659


>gi|398827408|ref|ZP_10585621.1| cytochrome o ubiquinol oxidase, subunit I [Phyllobacterium sp.
           YR531]
 gi|398219871|gb|EJN06335.1| cytochrome o ubiquinol oxidase, subunit I [Phyllobacterium sp.
           YR531]
          Length = 668

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/585 (73%), Positives = 506/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+M+RLQQA++F  S GYL   H++Q+FTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADAIMIRLQQAMAFNGSEGYLNAHHFDQVFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGI  SP  G+
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMMSLFVGEFAKTGWLAYPPLSGIGYSPDPGM 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ATI+KMRAPGM +M +PIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLLATIVKMRAPGMTMMKLPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRYIGT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 AVLALLTLDRYIGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+L+Y+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILAYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG++L+PFWGK SFWFW++GFY AFMPLYILG MGVTRR+  FE
Sbjct: 438 VLFGLFAGIYYWFPKAFGFRLDPFWGKMSFWFWVVGFYFAFMPLYILGLMGVTRRLRTFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA FG  L+A+GILSF+IQ+ VS R R +L D+TGDPW+GRTLEWST+SPP
Sbjct: 498 DPSLQIWFTIAGFGAFLVAIGILSFLIQIFVSIRNRESLRDLTGDPWDGRTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  DSW+ MKK  +K P+  F+ I MP NT  G+++S  SL+ GFA++W
Sbjct: 558 PAYNFAFTPVIHDLDSWYDMKKRGYKRPEKGFRAIHMPSNTGSGVILSGLSLVFGFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SF+  L   I +TFNYKR+++IS++E+   E  R  L
Sbjct: 618 YIWWLAAVSFVALLAWSIGHTFNYKRDFHISTDEVVASENARTEL 662


>gi|392954786|ref|ZP_10320337.1| cytochrome o ubiquinol oxidase subunit I 2 [Hydrocarboniphaga
           effusa AP103]
 gi|391857443|gb|EIT67974.1| cytochrome o ubiquinol oxidase subunit I 2 [Hydrocarboniphaga
           effusa AP103]
          Length = 667

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/584 (73%), Positives = 504/584 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFADAIMMRAQQAIAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLSGIA SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTAGAVLVMLSLFVGEFAKTGWLAYPPLSGIAYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ TIIKMRAPGM LM MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLMVTIIKMRAPGMTLMKMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+ T+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSE+VST+S 
Sbjct: 258 AVLVLLSLDRYVDTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPIFGVFSEIVSTYSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP+LWT+GFM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMLWTVGFMVTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YWFPK  G+KL+PFWGKCSFWFW  GF+ AFMPLY+LG MGVTRRMSHF+
Sbjct: 438 VVFGVFAGITYWFPKVTGFKLDPFWGKCSFWFWFTGFWFAFMPLYVLGLMGVTRRMSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWFQIAAFG +LIA+GI SF+IQL VS + R  L D+TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFQIAAFGAVLIALGIASFLIQLYVSIKNREQLRDLTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P IH+ D+W+ MKK  ++ P   F  I MPK T  GI+++  SL+ GFA++W
Sbjct: 558 PDYNFAFTPRIHEQDAWFDMKKRGYQRPIGGFLAIHMPKGTAAGIVLAGLSLVCGFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L   SF+  ++  I +TFNY R+YYI  +E+   E +  +
Sbjct: 618 HIWWLAAASFVGLVVSAIVHTFNYDRDYYIPVDEVVRTEGEHTQ 661


>gi|13475707|ref|NP_107274.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium loti
           MAFF303099]
 gi|14026463|dbj|BAB53060.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium loti
           MAFF303099]
          Length = 665

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/585 (71%), Positives = 498/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++F  S GYL   HY+QIFTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 76  MLLRGFSDAIMMRLQQAMAFNGSEGYLNSHHYDQIFTAHGVIMIFFVAMPFVTGLMNFVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGAILVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAILVMASLFVGEFARTGWLAYPPLSGIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TIIKMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIIKMRAPGMTMMRMPVFTWTSLCTNVLIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L  LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 256 AVLSLLALDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFELPMMWTMAFMLTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YW+PKAFG+KL+PFWGK SFW W++GF+ AFMPLYILG MGVTRRM  F+
Sbjct: 436 VLFGLFAGIAYWWPKAFGFKLDPFWGKVSFWCWVVGFWFAFMPLYILGLMGVTRRMRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG +LIA GI +F+IQ+ VS RKR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 496 DPSLQIWFVIAAFGAVLIAFGIAAFLIQIFVSIRKREALTDPTGDPWDGRTLEWSTSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++  +D+WW MKK  +  P   F+ I MP NT  G++++ FS+ +GF L+W
Sbjct: 556 PAYNFAFTPVVRDNDAWWDMKKAGYTRPLSGFKPIHMPSNTGTGVILAAFSVALGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SF+  +   I +TFNY R+++I + E+T  E  R  L
Sbjct: 616 YIWWLAALSFVCLIATAIGHTFNYHRDFHIPAAEVTQTEVARTTL 660


>gi|404319487|ref|ZP_10967420.1| cytochrome o ubiquinol oxidase subunit I [Ochrobactrum anthropi
           CTS-325]
          Length = 668

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/585 (71%), Positives = 502/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQA++F    GYLPP HY+QIFTAHGVIMIFF+AMP VTG++N++V
Sbjct: 78  MLLRGFADAIMMRIQQAVAFNGYEGYLPPHHYDQIFTAHGVIMIFFMAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGAI++M+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTGGAIIIMMSLFVGEFARTGWLAYPPLSGIDYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWT+LCTN+LIVA FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMSFMKMPVFTWTSLCTNVLIVATFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 ATLALLSLDRYVGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFVIGGM GV+LA+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVIGGMTGVMLAIPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YW+PKAFGYKL+PFWGK SFWFW IGF+ AFMPLY+LG  GVTRR+S FE
Sbjct: 438 VVFGLMAGLVYWWPKAFGYKLDPFWGKMSFWFWQIGFFFAFMPLYVLGLKGVTRRLSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ+WF IAAFG +LIA+GI SF++QL+VSY KR  L D+TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQVWFVIAAFGAVLIALGIASFLVQLVVSYMKREQLRDLTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK      P   F+ I MP+NT  G++++  S+++ FAL+W
Sbjct: 558 PEYNFAFTPVVHDLDSWYDMKNRGHVRPLTGFRPIHMPRNTGAGVILAALSVVLAFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L I+SF + LI  I +TFNY+R++YI +E +   E  R +L
Sbjct: 618 YIWWLAILSFAVLLIAAIGHTFNYQRDFYIPAETVAAAEDARSKL 662


>gi|385208383|ref|ZP_10035251.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. Ch1-1]
 gi|385180721|gb|EIF29997.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. Ch1-1]
          Length = 659

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/580 (71%), Positives = 500/580 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQAI+F    GYLPP HY+QIFTAHGV+MIFFVAMPL+TG++N++V
Sbjct: 75  MLLRGFSDALMMRAQQAIAFNGDPGYLPPHHYDQIFTAHGVVMIFFVAMPLITGLMNYVV 134

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LNN SFWMT+ GAIL+MIS+F G FA TGWL YPPLSG+AQSP VGV
Sbjct: 135 PLQIGARDVAFPSLNNFSFWMTTAGAILLMISMFFGVFARTGWLAYPPLSGLAQSPDVGV 194

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY W LQIAG+GTLLSGIN++ TIIKMRAPGM +M MPIFTWT+LCTN+LIVAAFPVLT
Sbjct: 195 DYYAWCLQIAGVGTLLSGINLLVTIIKMRAPGMSMMRMPIFTWTSLCTNVLIVAAFPVLT 254

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL +  LDRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LPVFG+FSEVV TFS 
Sbjct: 255 AVLGMLLLDRYVGTHFFTNDFGGNAMMYVNLIWIWGHPEVYILILPVFGVFSEVVPTFSR 314

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 315 KRLFGYTSMVYATVVITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKVFNWL 374

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+F+VP+LWT+GFM+TFVIGGM GV+LAVP ++F+LHNSLFLVAHFHNVIIGG
Sbjct: 375 FTMYRGRIKFDVPMLWTVGFMVTFVIGGMTGVMLAVPPSDFVLHNSLFLVAHFHNVIIGG 434

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ + INYWFPKAFGY+L+PFWGKCSFWFWL+GFY+AFMPLY+LG MGVTRRM+HF+
Sbjct: 435 VVFGIFAAINYWFPKAFGYRLDPFWGKCSFWFWLVGFYLAFMPLYVLGLMGVTRRMNHFD 494

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF+IAA G  LIA+GI +F++QL VS+++R  L D+TGDPW GRTLEWS  SPP
Sbjct: 495 DPSLQIWFEIAAVGAGLIALGIGAFLMQLWVSWKRRAELRDVTGDPWEGRTLEWSLPSPP 554

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF PL+H +D+WW MKK+  + P   F+ I MP NT +GI ++ +SL++GFA VW
Sbjct: 555 PEYNFAFTPLVHDTDAWWQMKKHKARPPTTGFRSIHMPGNTAVGIFLAAWSLVLGFASVW 614

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           HM +L+ +SF+  +  V+  +  + R   + ++ +   E+
Sbjct: 615 HMQILSALSFVGIVATVLAYSSGWARARDVPADVVEATER 654


>gi|357975686|ref|ZP_09139657.1| cytochrome o ubiquinol oxidase subunit I [Sphingomonas sp. KC8]
          Length = 667

 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/585 (71%), Positives = 496/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYL   HY+QIFTAHGVIMIFFVAMPLVTG++N+IV
Sbjct: 78  MLLRGFADAIMMRLQQAMAFGGSEGYLNAHHYDQIFTAHGVIMIFFVAMPLVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA++VMISLF+GEFA TGWL YPPLSGIA SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTAAGAVIVMISLFVGEFAQTGWLAYPPLSGIAYSPNVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSMMKMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTFS 
Sbjct: 258 ATLVLLSLDRYVGTAFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI FE+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRISFELPMMWTIAFMLTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYW+PKAFG+KLE  WGK SFW W++GF+ AFMPLYILG MGVTRRM  F+
Sbjct: 438 VLFGLFAGINYWWPKAFGFKLETTWGKRSFWLWVVGFWTAFMPLYILGLMGVTRRMRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G++LIA+GI   +IQ  VS+R R  L D TGDPWNGRTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAIGSVLIALGIACMLIQFYVSFRDREQLRDTTGDPWNGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MKK  ++ P   F+ I MP NT  G+++S+ S+     ++W
Sbjct: 558 PDYNFAFTPVIHDGDAWTDMKKRGYQRPTSGFRPIHMPSNTGTGVILSVLSIAFSMGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L   SF   LI+ I +TFNYKR+++I  +E+   E +R  L
Sbjct: 618 YMWWLAAASFAAILIVAIGHTFNYKRDFHIPVDEVIRTEDERTTL 662


>gi|120610896|ref|YP_970574.1| cytochrome-c oxidase [Acidovorax citrulli AAC00-1]
 gi|120589360|gb|ABM32800.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Acidovorax
           citrulli AAC00-1]
          Length = 667

 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/582 (72%), Positives = 495/582 (85%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 80  MLLRGFADAVMMRLQQAVAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GAILVMISLF+GEF+++GWL    L   AQ+PG G+
Sbjct: 140 PLQIGARDVAFPFLNNFSFWMTTAGAILVMISLFLGEFSTSGWLALSNLG--AQNPGTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TIIKMRAPGM LM MPIFTWT+LCTN LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPIFTWTSLCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTND GGN M+YVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 AALVLMSLDRYVGTNFFTNDFGGNPMLYVNLIWIWGHPEVYILILPAFGIFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WT+ FM TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMMWTVAFMATFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYWFPKAFGYKL+  WG  SFW W++GF+VAF PLY+LG +GVTRR++HFE
Sbjct: 438 VLFGLFAGINYWFPKAFGYKLDRTWGVRSFWLWVVGFWVAFAPLYVLGLLGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI  F+IQL VSY KR  L D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAIGAGLIALGIACFLIQLAVSYLKRDQLRDFTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H+ D+WW MKK+ +K P   FQ I MP NT  G +IS  SL++GFAL+W
Sbjct: 558 PQYNFAFTPRVHEIDAWWDMKKHGYKRPLAGFQPIHMPANTGAGAVISGLSLVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           HMWLL  +SF   ++  I +TFNYKR++YI ++E+   E+ R
Sbjct: 618 HMWLLAGVSFAGIVLAAIIHTFNYKRDFYIPADEVGTTEEAR 659


>gi|86747367|ref|YP_483863.1| cytochrome-c oxidase [Rhodopseudomonas palustris HaA2]
 gi|86570395|gb|ABD04952.1| Cytochrome-c oxidase [Rhodopseudomonas palustris HaA2]
          Length = 669

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/585 (71%), Positives = 499/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQA++F  S GYL   HY+Q+FTAHGVIMIFFVAMP+VTG++N++V
Sbjct: 78  MLLRGFADAVMMRAQQAMAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPMVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVMISLF+GEFA TGWL YPPLS I  SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMISLFVGEFARTGWLAYPPLSNIGYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSG+N+I TI+K+RAPGM +M MPIFTWT+LCTNILIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTTLSGVNLICTIVKVRAPGMTMMRMPIFTWTSLCTNILIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 VVLALLSLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+++P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRYDLPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL +GI YWFPKAFG+KL+ FWGK SFW W++GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VVFGLFAGIAYWFPKAFGFKLDVFWGKISFWCWVVGFYFAFMPLYVLGLMGVTRRLRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA FG  LI +GI++F+IQ+ VS  +R  L D+TGDPWNGRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAGFGAFLILIGIVAFLIQIAVSVMRREQLRDVTGDPWNGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++  SD+WW MKK  +K P + F+ I MP NT  GI++S  S++M F L+W
Sbjct: 558 PDYNFAFTPMVRDSDAWWDMKKAGYKRPLEGFKPIHMPSNTGTGIILSGLSMVMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SFI  L + I +TFNY R+++I +EE+  +E +R RL
Sbjct: 618 YIWWLAALSFIALLAVAIGHTFNYHRDFHIPAEEVVRVEDERTRL 662


>gi|418935356|ref|ZP_13489133.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. PDO1-076]
 gi|375057944|gb|EHS54091.1| cytochrome o ubiquinol oxidase, subunit I [Rhizobium sp. PDO1-076]
          Length = 667

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/585 (71%), Positives = 502/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+F  + GYL P HY+QIFTAHGVIMIFF+AMP VTG++N++V
Sbjct: 78  MLMRGFADAIMMRIQQAIAFNGNEGYLNPHHYDQIFTAHGVIMIFFMAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+++M+SLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVIIMMSLFVGEFARTGWLAYPPLSGADYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWT+LCTNILIVA FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTSLCTNILIVATFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYIL+LP FGIFSEVV+TFSS
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILILPAFGIFSEVVATFSS 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYLVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWTIGFM+TFVIGGM GV+LA+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTIGFMVTFVIGGMTGVMLAIPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGLM+G+ YW+PKAFGYKL+PFWGK SFWFW IGF  AFMPLY+LG MGVTRR+S FE
Sbjct: 438 VVFGLMAGVVYWWPKAFGYKLDPFWGKMSFWFWQIGFLFAFMPLYVLGLMGVTRRVSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI SF++Q++VSY +R  L + +GD WNGRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGAFLIALGIASFVVQIVVSYLRRDQLRETSGDAWNGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK   ++ P   F+ I MPKNT  G++++  S+++ FAL+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKNRGYERPLAGFKPIHMPKNTGTGVILAALSVVLAFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L ++S +  + + I +TFNYKR++YI +E +T  E  R +L
Sbjct: 618 YIWWLAVLSLVAVIAVAIGHTFNYKRDFYIPAETVTATEDARSQL 662


>gi|433773934|ref|YP_007304401.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium
           australicum WSM2073]
 gi|433665949|gb|AGB45025.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium
           australicum WSM2073]
          Length = 665

 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/585 (71%), Positives = 499/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQAI+F  S GYL   HY+QIFTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 76  MLLRGFSDAIMMRLQQAIAFNGSEGYLNSHHYDQIFTAHGVIMIFFVAMPFVTGLMNFVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGAILVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAILVMASLFVGEFARTGWLAYPPLSGIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TIIKMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIIKMRAPGMTMMRMPVFTWTSLCTNVLIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L  LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 256 AVLSLLALDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFELPMMWTVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YW+PKAFG+KL+PFWGK SFW W++GF+ AFMPLY+LG MGVTRRM  F+
Sbjct: 436 VLFGLFAGIAYWWPKAFGFKLDPFWGKVSFWCWVVGFWFAFMPLYVLGLMGVTRRMRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG +LIA GI +F+IQ+ VS R+R  L D TGDPW+GRTLEWSTSSPP
Sbjct: 496 DPSLQIWFVIAAFGAVLIACGIAAFLIQIFVSIRRREALADPTGDPWDGRTLEWSTSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+I  +D+W+ MK+  +  P   F+ I MP NT  G++++ FS+ +GFAL+W
Sbjct: 556 PAYNFAFTPVIRDNDAWFDMKQAGYTRPLAGFKPIHMPSNTGTGVILAAFSVALGFALIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SF+  +   I +TFNY R+++I + E+T  E+ R  L
Sbjct: 616 YIWWLAALSFVCLIATAIGHTFNYHRDFHIPAAEVTRTEEARTTL 660


>gi|367474032|ref|ZP_09473566.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. ORS 285]
 gi|365273658|emb|CCD86034.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. ORS 285]
          Length = 669

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/585 (70%), Positives = 495/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRLQQAIAFNGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAILVM SLF+GEFA TGWL YPPLS ++ SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAILVMCSLFVGEFARTGWLAYPPLSNLSYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG+KL+PFWGK SFWFW +GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGIAYWFPKAFGFKLDPFWGKMSFWFWTVGFYFAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G  +I +GI SF+IQ+ VS  +R  L D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAGIGAFMILLGIASFLIQIAVSVLRREQLADTTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MK+  +  P   F+ I MP NT  G++++  S  MGF L+W
Sbjct: 558 PAYNFAFTPVIHDNDAWWDMKRRGYARPLTGFKAIHMPSNTGTGVILAGLSTSMGFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW +   SF+  L + I +TFNY R+++I ++E+  +E+ R  L
Sbjct: 618 YMWWMAAGSFVALLAVAIGHTFNYHRSFHIPADEVVSVERARTEL 662


>gi|319783412|ref|YP_004142888.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169300|gb|ADV12838.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 670

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/585 (71%), Positives = 503/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQQA++FG S GYL   HY+QIFTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFSDAIMMRLQQAMAFGGSEGYLNSHHYDQIFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA++VM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTVGGAVIVMMSLFVGEFARTGWLAYPPLSGIGYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N++ TI+KMRAPGM +M MPIFTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLVCTIVKMRAPGMTMMRMPIFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L  LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV S F  
Sbjct: 258 AVLALLALDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSAFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+VIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATIVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI+YWFPKAFG++L+PFWGK SFWFW++GF+ AFMPLYILG MGVTRR+  FE
Sbjct: 438 VLFGLFAGISYWFPKAFGFRLDPFWGKMSFWFWVVGFWFAFMPLYILGLMGVTRRLRTFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LI +GILSF+IQ+ VS R+R  L D TGDPW+GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAAFGAFLILLGILSFLIQIFVSVRRREQLRDDTGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W  MK   ++ P   F DI MP+NT  G++++  S+++  AL+W
Sbjct: 558 PAYNFAFTPVIHDLDTWADMKNRGYQRPLTGFHDIHMPRNTGAGVILAGLSVVLAVALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L I+SF+  +   I +TFNY R+++I S ++T +E +R RL
Sbjct: 618 YIWWLAIVSFVALIGYAIAHTFNYDRDFHIPSSDVTRVEDERTRL 662


>gi|456357356|dbj|BAM91801.1| cytochrome o ubiquinol oxidase subunit I [Agromonas oligotrophica
           S58]
          Length = 669

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/585 (70%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRLQQAIAFNGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLS I+ SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTSGAVLVMCSLFVGEFARTGWLAYPPLSNISYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG++L+PFWGK SFWFW +GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGIAYWFPKAFGFRLDPFWGKLSFWFWTVGFYFAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G  LI +GI SF+IQ+ VS  +R  L DI+GDPWN RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAGIGAFLILLGIASFLIQIAVSILRREQLADISGDPWNARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+  +  P   F+ I MP NT  G++++  S  M F L+W
Sbjct: 558 PAYNFAFTPVVHDNDAWWDMKRRGYIRPLAGFKAIHMPSNTGTGVILAGLSTTMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW +   SF+  L + I +TFNY R+++I ++E+   E+ R  L
Sbjct: 618 YMWWMAAGSFVALLAVAITHTFNYHRSFHIPADEVVSAERARTEL 662


>gi|408787319|ref|ZP_11199049.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium lupini HPC(L)]
 gi|408486705|gb|EKJ95029.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium lupini HPC(L)]
          Length = 667

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/584 (73%), Positives = 503/584 (86%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQAI+FG + GYLPP H++QIFTAHGVIMIFF+AMP +TG++NF++
Sbjct: 77  MLLRGFADAVMMRAQQAIAFGENEGYLPPHHFDQIFTAHGVIMIFFMAMPFITGLMNFVI 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFWMT  GA+L+M SLF+GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 137 PLQIGARDVAFPFLNNLSFWMTVAGAVLIMSSLFVGEFARTGWLAYPPLSGIDYSPGVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQIAG+GT LSGIN++ TIIKMRAPGM +M MPIFTWT+ CTNILI+A FP+LT
Sbjct: 197 DYYLWALQIAGVGTTLSGINLLTTIIKMRAPGMSMMKMPIFTWTSFCTNILIIATFPILT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GTHFFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTF  
Sbjct: 257 ATLALLTLDRYAGTHFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFCG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 317 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFEVP++WT+GFM+TFVIGGM GV+LA+P A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 377 FTMYQGRIRFEVPMMWTVGFMVTFVIGGMTGVMLAIPPADFVLHNSLFLVAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL++G  YWFPKAFG++L+PFWGK SFW WL+GFY+AFMPLY+LG MGVTRR++  +
Sbjct: 437 VVFGLLAGTVYWFPKAFGFRLDPFWGKVSFWCWLVGFYLAFMPLYVLGLMGVTRRLAQID 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA GILSFIIQLIVS+ +R  L D TGDPWNGRTLEW+T+SPP
Sbjct: 497 DPSLQIWFVIAAVGAAVIACGILSFIIQLIVSFMRREELRDTTGDPWNGRTLEWATASPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ DSW+ MK+    FP + F+ I MP+NT  GI IS  S+I GFA VW
Sbjct: 557 PSYNFAFTPVVHELDSWYDMKRMGESFPAEGFRAIHMPRNTATGIYISGLSVIFGFATVW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L+ ++F   LI+ I +TFNY R+YY+S EE+   E  RIR
Sbjct: 617 YMWWLSALAFAAILIVAIAHTFNYDRHYYLSQEEVAQTE-ARIR 659


>gi|365881183|ref|ZP_09420508.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. ORS 375]
 gi|365290634|emb|CCD93039.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. ORS 375]
          Length = 669

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRLQQAIAFNGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLS ++ SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMCSLFVGEFARTGWLAYPPLSNLSYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG+KL+PFWGK SFWFW +GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGIAYWFPKAFGFKLDPFWGKMSFWFWTVGFYFAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G  +I +GI SF+IQ+ VS  +R  L+D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAGIGAFMILLGIASFLIQIAVSVLRREQLVDTTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MK+  +  P   F+ I MP N+  G++++  S  M F L+W
Sbjct: 558 PAYNFAFTPVIHDNDAWWDMKRRGYVRPLTGFKAIHMPSNSGTGVILAGLSTTMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW +   SF   L + I +TFNY R+++I ++E+  +E+ R  L
Sbjct: 618 YMWWMAAGSFAALLAVAIGHTFNYHRSFHIPADEVVSVERARTEL 662


>gi|146338786|ref|YP_001203834.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. ORS
           278]
 gi|146191592|emb|CAL75597.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. ORS 278]
          Length = 669

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/585 (70%), Positives = 493/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRLQQAIAFNGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLS ++ SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMCSLFVGEFARTGWLAYPPLSNLSYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG+KL+PFWGK SFWFW +GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGIAYWFPKAFGFKLDPFWGKMSFWFWTVGFYFAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G  LI +GI SF+IQ+ VS  +R  L D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAGIGAFLILLGIASFLIQIAVSVLRREQLADTTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH +D+WW MK+  +  P   F+ I MP NT  G++++  S  M F L+W
Sbjct: 558 PAYNFAFTPVIHDNDAWWDMKRRGYVRPLTGFKAIHMPSNTGTGVILAGLSTTMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW +   SF+  L + I +TFNY R+++I ++E+   E+ R  L
Sbjct: 618 YMWWMAAGSFVALLAVAIGHTFNYHRSFHIPADEVVGTERARTEL 662


>gi|365900876|ref|ZP_09438736.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. STM 3843]
 gi|365418440|emb|CCE11278.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) [Bradyrhizobium sp. STM 3843]
          Length = 668

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/585 (70%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQA++F  S G+LP  HY+Q+FTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 78  MLLRGFADALMMRMQQAMAFNGSEGFLPAHHYDQVFTAHGVIMIFFVAMPLVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS +A SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNLAYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLICTIVKMRAPGMTMMRMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG+KL+ FWGK SFWFW++GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGIGYWFPKAFGFKLDVFWGKLSFWFWVVGFYLAFMPLYVLGLMGVTRRLRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G LLIA GI  F+IQ+ VS  +R  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAGIGALLIACGIACFLIQIAVSVLRREKLADVTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+  +  P   F+ I MP NT  G++++  +  M F L+W
Sbjct: 558 PAYNFAFTPVVHDNDAWWDMKRRGYARPLAGFKAIHMPSNTGTGVILAGLATAMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SFI  L + I +TFNY +++ I ++E+   E+ R  L
Sbjct: 618 YIWWLAGVSFIALLAVAIRHTFNYHQSFNIPADEVVRTERARTEL 662


>gi|218532591|ref|YP_002423407.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium
           extorquens CM4]
 gi|218524894|gb|ACK85479.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           extorquens CM4]
          Length = 667

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/584 (70%), Positives = 493/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQAI+FGS+ G+LPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFADALLMRSQQAIAFGSNEGFLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  GA  +MISLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVSGATTIMISLFVGEFARTGWLAYPPLSGADMSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN++ATI+KMRAPGM +M +PIFTWT+LCTN+LIVAAFP+L 
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLVATIVKMRAPGMSMMKLPIFTWTSLCTNVLIVAAFPILA 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GTHFFTNDLGGN MMY NLIWIWGHPEVYIL+LP FG+FSEV S FS 
Sbjct: 258 AVLALLSLDRYVGTHFFTNDLGGNPMMYFNLIWIWGHPEVYILILPAFGVFSEVTSAFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFG+TTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGLTTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF+VP+LWT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFDVPMLWTVSFMVTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG++L+ FWGK SFWFW IGFYVAFMPLY+LG MGVTRR  HF+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFRLDEFWGKVSFWFWTIGFYVAFMPLYVLGLMGVTRRAQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI + I+Q  VS + R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAIGAGLIALGIGAMIVQFAVSIKNREALRDVTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+WW MK   F+ P   ++ I MPKNT  G+++ + S++  FA++W
Sbjct: 558 PDYNFAFTPVVHSLDAWWDMKARGFQRPLSGYKPIHMPKNTATGVILGVVSIVFSFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  ++F+  L I I +TFNY R++YI +E +   E++R  
Sbjct: 618 YIWWLAALTFVAMLAITIAHTFNYNRDFYIPAETVRRTEQQRTE 661


>gi|163853733|ref|YP_001641776.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium
           extorquens PA1]
 gi|240141158|ref|YP_002965638.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium
           extorquens AM1]
 gi|254563670|ref|YP_003070765.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium
           extorquens DM4]
 gi|418059898|ref|ZP_12697832.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           extorquens DSM 13060]
 gi|163665338|gb|ABY32705.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           extorquens PA1]
 gi|240011135|gb|ACS42361.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           extorquens AM1]
 gi|254270948|emb|CAX26953.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           extorquens DM4]
 gi|373566545|gb|EHP92540.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           extorquens DSM 13060]
          Length = 667

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/584 (70%), Positives = 493/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQAI+FGS+ G+LPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFADALLMRSQQAIAFGSNEGFLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  GA  +MISLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVSGAATIMISLFVGEFARTGWLAYPPLSGADMSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN++ATI+KMRAPGM +M +PIFTWT+LCTN+LIVAAFP+L 
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLVATIVKMRAPGMSMMKLPIFTWTSLCTNVLIVAAFPILA 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GTHFFTNDLGGN MMY NLIWIWGHPEVYIL+LP FG+FSEV S FS 
Sbjct: 258 AVLALLSLDRYVGTHFFTNDLGGNPMMYFNLIWIWGHPEVYILILPAFGVFSEVTSAFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFG+TTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGLTTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF+VP+LWT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFDVPMLWTVSFMVTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG++L+ FWGK SFWFW IGFYVAFMPLY+LG MGVTRR  HF+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFRLDEFWGKVSFWFWTIGFYVAFMPLYVLGLMGVTRRAQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI + I+Q  VS + R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAIGAGLIALGIGAMIVQFAVSIKNREALRDVTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+WW MK   F+ P   ++ I MPKNT  G+++ + S++  FA++W
Sbjct: 558 PDYNFAFTPVVHSLDAWWDMKARGFQRPLSGYKPIHMPKNTATGVILGVVSIVFSFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  ++F+  L I I +TFNY R++YI +E +   E++R  
Sbjct: 618 YIWWLAALTFVAMLAITIAHTFNYNRDFYIPAETVRRTEQQRTE 661


>gi|148253542|ref|YP_001238127.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. BTAi1]
 gi|146405715|gb|ABQ34221.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Bradyrhizobium
           sp. BTAi1]
          Length = 669

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/585 (69%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADALMMRLQQAIAFNGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLF+GEFA TGWL YPPLS ++ SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMCSLFVGEFARTGWLAYPPLSNLSYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTLLSGVNLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILILPAFGIFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GI YWFPKAFG+KL+ FWGK SFWFW +GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGLFAGIAYWFPKAFGFKLDVFWGKMSFWFWTVGFYFAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G  LI +GI SF+IQ+ VS  +R  L D++GDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAGIGAFLILLGIASFLIQIAVSILRREQLADVSGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+  +  P   F+ I MP NT  G++++  S  M F L+W
Sbjct: 558 PAYNFAFTPVVHDNDAWWDMKRRGYVRPLAGFKAIHMPSNTGTGVILAGLSTTMAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW +   SF+  L + I +TFNY R+++I ++E+  +E+ R  L
Sbjct: 618 YMWWMAAGSFVALLAVAIGHTFNYHRSFHIPADEVVSVERARTEL 662


>gi|86360307|ref|YP_472195.1| cytochrome O ubiquinol oxidase, subunit I protein [Rhizobium etli
           CFN 42]
 gi|86284409|gb|ABC93468.1| cytochrome O ubiquinol oxidase, subunit I protein [Rhizobium etli
           CFN 42]
          Length = 667

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/585 (72%), Positives = 505/585 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR+QQAI+F  S GYLPP HY+QIFTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 78  MLLRGFSDAILMRVQQAIAFNGSEGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLALLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FE
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SL+IWF +AAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+ RTLEWSTSSPP
Sbjct: 498 DPSLRIWFIVAAFGVGLIALGIAAFLIQIVVSFIKREELRDDSGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  DSW+ MK+  ++ P   F+ I MPKNT  G ++S  S+ + F L+W
Sbjct: 558 PDYNFAFTPVVHDHDSWYDMKRRGYERPLGGFKPIHMPKNTGTGAILSAISVALAFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++S +  L++ I +TFNYKR++YI + ++T  E KR  L
Sbjct: 618 YMWWLVVVSAVALLVVAIGHTFNYKRDFYIPAGKVTETEGKRTAL 662


>gi|338741540|ref|YP_004678502.1| cytochrome o ubiquinol oxidase subunit I [Hyphomicrobium sp. MC1]
 gi|337762103|emb|CCB67938.1| cytochrome o ubiquinol oxidase, subunit I [Hyphomicrobium sp. MC1]
          Length = 668

 Score =  879 bits (2272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/585 (71%), Positives = 495/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+F  + GYLP  H++QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 78  MLLRGFADAIMMRAQQAIAFNGNEGYLPAHHFDQIFTAHGVIMIFFVAMPLVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  G +LVM SLF+GEFA TGWL YPPLS  A SP VGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVSGGVLVMASLFVGEFARTGWLAYPPLSNYAYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+IATI+KMR PGM +M MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLIATIVKMRCPGMTMMKMPVFTWTALCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 258 GVLALLSLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILVLPVFGVFSEVTATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPK  G+KL+PFWGK SFWFW+ GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VVFGCFAGIAYWFPKVTGFKLDPFWGKMSFWFWVSGFYLAFMPLYVLGLMGVTRRLRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQI+F IAAFG  LIA+GI SF+IQL VS + R  L D+TGDPWN RTLEWSTSSPP
Sbjct: 498 DPSLQIYFVIAAFGAFLIALGIGSFLIQLAVSIKNREKLRDLTGDPWNARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           PVYNFAF P+++  D+WW MK++ +K P   F+ I MP+NT  G++++  S I GFAL+W
Sbjct: 558 PVYNFAFTPVVYDHDAWWDMKEHGYKRPMGGFKPIHMPRNTGAGVILAGLSFITGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  + F+  L   I +TFNY R++ I +++I   E +R +L
Sbjct: 618 YIWWLAAVGFVALLATAIGHTFNYNRSFNIPTQQIVETESERTQL 662


>gi|389874860|ref|YP_006374216.1| cytochrome o ubiquinol oxidase, subunit I (ubiquinol oxidase chain
           A) [Tistrella mobilis KA081020-065]
 gi|388532040|gb|AFK57234.1| cytochrome o ubiquinol oxidase, subunit I (ubiquinol oxidase chain
           A) [Tistrella mobilis KA081020-065]
          Length = 667

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/584 (70%), Positives = 495/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAI+F  S GYL   HY+Q+FTAHGVIMIFFVAMP+VTG++N+IV
Sbjct: 78  MLLRGFADAIMMRLQQAIAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPIVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+L+M+SLF+GEFA TGWL YPPLS IA SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTGGAVLIMMSLFVGEFAQTGWLAYPPLSNIAYSPNVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+I TI+KMRAPGM +M MP+FTWT+LCTN+LIVAAFP+LT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLICTIVKMRAPGMTMMKMPVFTWTSLCTNVLIVAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV +TF  
Sbjct: 258 AVLALLSLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPMFGVFSEVTATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYATV IT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYKSMVYATVAITVLSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFSLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  + I YWFPK FG+KL+ FWGK SFW W++GFY AFMPLY+LG MGVTRRM  F+
Sbjct: 438 VLFGAFAAIAYWFPKTFGFKLDVFWGKVSFWLWVVGFYFAFMPLYVLGLMGVTRRMRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G ++IA GI +F+IQ+ VS R R+ L D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAALGAVMIAGGIAAFLIQIAVSVRNRNKLRDTTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+I+  D+WW MK+N ++ P+  F+ I MPKNT  GI+++  S+++G AL+W
Sbjct: 558 PDYNFAFTPVIYDRDAWWDMKQNGYQRPQMGFRSIHMPKNTGAGIILAGLSVVLGVALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SF+  +   IY+TFNY R+++I  E +   E +R R
Sbjct: 618 YIWWLAAVSFVALIGSAIYHTFNYNRDFHIPVETVEKTEAERTR 661


>gi|440225062|ref|YP_007332153.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium tropici CIAT
           899]
 gi|440036573|gb|AGB69607.1| cytochrome o ubiquinol oxidase subunit I [Rhizobium tropici CIAT
           899]
          Length = 667

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/584 (72%), Positives = 496/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MRLQQAI+F  S GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N +V
Sbjct: 78  MLLRGFSDALLMRLQQAIAFNGSEGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNLVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++MISLFIGEFA TGWL YPPLSGIA SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAIVIMISLFIGEFAKTGWLAYPPLSGIAYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AGIGT LSGIN+IATI+KMRAPGM  M MP+FTWT+LCTNILIVA+FP+LT
Sbjct: 198 DYYIWGLQVAGIGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTSLCTNILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVV+TF  
Sbjct: 258 ATLVLLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYILILPAFGVFSEVVATFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYASMVYATCVIMILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIR+E P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYHGRIRYEPPMLWTVGFMVTFTIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLYILG MGVTRR+S F+
Sbjct: 438 VLFGMFAGVNYWFPKAFGFKLDPFWGKMSFWFWQIGFWFAFMPLYILGLMGVTRRVSQFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GI  F+IQL VS+ KR  L D TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFIIAAFGAGLIAIGIACFLIQLAVSFMKREELRDHTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+++  D+WW MK   +  P + F  I MPKNT  GI++ + S+   F ++W
Sbjct: 558 PAYNFAFTPIVYDHDAWWDMKNRGYVRPTEGFIPIHMPKNTGTGIILGVLSIGFAFGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +MW L  I+F+  ++I I +TFNYKR+Y+I ++E+   E +R +
Sbjct: 618 YMWWLAAITFVAMIVITIGHTFNYKRDYHIPADEVVKTENERTK 661


>gi|222111440|ref|YP_002553704.1| cytochrome o ubiquinol oxidase subunit I [Acidovorax ebreus TPSY]
 gi|221730884|gb|ACM33704.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax ebreus TPSY]
          Length = 668

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/584 (71%), Positives = 485/584 (83%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 80  MFLRGFADAVMMRLQQAMAVGESMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L   AQ PGVG+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--AQDPGVGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRYIGT+FFTNDLGGN M+YVNLIWIWGHPEVYILVLP FG+FSEVV+TFS 
Sbjct: 258 AALVLMSLDRYIGTNFFTNDLGGNSMLYVNLIWIWGHPEVYILVLPAFGVFSEVVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGATVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF VP+LWT+GFM TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYKGRIRFSVPMLWTVGFMCTFAIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + + IN+WFPKAFG++L   WGK SFWFWL GF+V F PLYILG MG+TRR++H E
Sbjct: 438 VVFAVFAAINFWFPKAFGFRLIESWGKASFWFWLTGFWVTFTPLYILGLMGITRRVNHVE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SL IWF I+A G  LIA GI  F IQL VSY KR  L D+TGDPW+GRTLEW+TSSPP
Sbjct: 498 DASLHIWFIISAVGVCLIAAGIACFFIQLFVSYLKRDQLRDVTGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+ H+ D+WW MKK+ +K P   FQ + MP NT  G++I+  S + GFA++W
Sbjct: 558 PQYNFAFTPVAHEIDAWWDMKKHGYKRPLTGFQPVHMPANTGAGVVIAALSTVFGFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW L + SF  T++  I +TFNYKR+YYI + E+   E  R +
Sbjct: 618 HMWPLAVASFAATVLASIIHTFNYKRDYYIPAAEVAATEDARTK 661


>gi|319762688|ref|YP_004126625.1| cytochrome o ubiquinol oxidase, subunit i [Alicycliphilus
           denitrificans BC]
 gi|330824829|ref|YP_004388132.1| cytochrome o ubiquinol oxidase subunit I [Alicycliphilus
           denitrificans K601]
 gi|317117249|gb|ADU99737.1| cytochrome o ubiquinol oxidase, subunit I [Alicycliphilus
           denitrificans BC]
 gi|329310201|gb|AEB84616.1| cytochrome o ubiquinol oxidase, subunit I [Alicycliphilus
           denitrificans K601]
          Length = 668

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/570 (72%), Positives = 488/570 (85%), Gaps = 2/570 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA MMRLQQ+++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 80  MFLRGFADAAMMRLQQSMAFGENMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM+SLF+GEF++ GWL    L   AQ PGVG+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMLSLFLGEFSTAGWLALSNLG--AQDPGVGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM+LM MP+F+WTALCTN LIVA FP+LT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMQLMKMPVFSWTALCTNALIVATFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGGN M+YVNLIWIWGHPEVYILVLP FG+FSEVV+TFS 
Sbjct: 258 AALVLMSLDRYAGTNFFTNDLGGNSMLYVNLIWIWGHPEVYILVLPAFGVFSEVVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITVLSYLVWLHHFFTMGSGATVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMLWTVGFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFGYKL+ FWG+CSFWFWL+GF+VAF PLYILG MG TRR++HFE
Sbjct: 438 VVFAVFAGINYWFPKAFGYKLDEFWGRCSFWFWLVGFWVAFTPLYILGLMGATRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI SF+IQL VSY +R  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAACGAALIALGIASFLIQLAVSYARREQLRDVTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+ H+ D+WW MKK+ ++ P   FQ I MP NT  G++I+  S + GFA++W
Sbjct: 558 PQYNFAFTPVAHEIDAWWDMKKHGYQRPLAGFQPIHMPANTGAGVVIAGLSTLFGFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYI 570
           HMW L I SF  T++  I +TFNY+R+Y+I
Sbjct: 618 HMWPLAIASFAATVLASIIHTFNYQRDYHI 647


>gi|427404422|ref|ZP_18895162.1| cytochrome o ubiquinol oxidase, subunit I [Massilia timonae CCUG
           45783]
 gi|425716973|gb|EKU79940.1| cytochrome o ubiquinol oxidase, subunit I [Massilia timonae CCUG
           45783]
          Length = 669

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/587 (71%), Positives = 496/587 (84%), Gaps = 2/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + G+LPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFADALMMRAQQAIAFGDNAGFLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GA+L+M SLF+GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTTMGAVLIMASLFVGEFARTGWLAYPPLSGILASPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSG+N+I TIIKMRAPGM LM MP+FTWT+LCTNILIV  FP+LT
Sbjct: 198 DYYIWALQIAGVGTTLSGVNLIVTIIKMRAPGMDLMKMPVFTWTSLCTNILIVVTFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL +  +DR + T FFT+D GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVVSTF  
Sbjct: 258 AVLAMLGMDRLLDTAFFTSDRGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATCVIMVLSYLVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LA+PAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVSFMLTFVIGGMTGVMLAIPAADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GINYWFPKAFGYKL+ FWG  SFW W IGF+VAF P YILGFMG TRR+SHF+
Sbjct: 438 VVFGIFAGINYWFPKAFGYKLDRFWGLVSFWLWSIGFWVAFTPPYILGFMGYTRRVSHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           D S+Q  FQI+  GTL+IA GI + ++Q+ VS+R R+T  L D TGDPW GRTLEWSTSS
Sbjct: 498 DPSVQWLFQISFVGTLMIAGGIAALLMQVYVSFRDRNTARLRDFTGDPWEGRTLEWSTSS 557

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFAF P++H +D++  MKKN ++ P   F  I MPKNT  G +IS  S ++GF +
Sbjct: 558 PPPDYNFAFTPVVHDNDTFADMKKNGYRRPLKDFVAIHMPKNTGAGFVISAISCVVGFGI 617

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WHMW LT+ SF++ +  +I +TFNYKR+YYI +EE+   E +R R+
Sbjct: 618 IWHMWALTVASFVVMMAAIIIHTFNYKRDYYIPAEEVARTEAERTRM 664


>gi|445497373|ref|ZP_21464228.1| ubiquinol oxidase subunit 1 [Janthinobacterium sp. HH01]
 gi|444787368|gb|ELX08916.1| ubiquinol oxidase subunit 1 [Janthinobacterium sp. HH01]
          Length = 668

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/585 (70%), Positives = 500/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG + G LPP HY+QIFTAHG IMIFFVAMPLVTG++N++V
Sbjct: 79  MLLRGFADALMMRAQQAMAFGDNVGALPPHHYDQIFTAHGTIMIFFVAMPLVTGLMNYVV 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+L M+SLF+GEFA TGWL +PPLSGIA SP VGV
Sbjct: 139 PLQIGARDVSFPFLNNFSFWMTTFGAMLTMVSLFVGEFARTGWLAFPPLSGIAASPDVGV 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GT LSG+N+IATI+KMRAPGM +M MP+FTWTALCTN LIVA FP+L 
Sbjct: 199 DYYIWSLQVAGVGTTLSGVNLIATIVKMRAPGMTMMKMPVFTWTALCTNALIVATFPILA 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + +LDR +GT+FFTNDLGGN M+YVNLIWIWGHPEVYILVLPVFG+FSE+VSTFS+
Sbjct: 259 VTLAMLSLDRMVGTNFFTNDLGGNPMLYVNLIWIWGHPEVYILVLPVFGVFSEIVSTFSA 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 319 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF+VP+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 379 FTMYKGRVRFDVPMLWTVGFMLTFTIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+NYWFPKAFG+KL+ FWGK SFW WL+GF+VAF PLY++GFMGVTRRM+HF+
Sbjct: 439 VVFGCFAGLNYWFPKAFGFKLDEFWGKVSFWCWLVGFWVAFTPLYVMGFMGVTRRMNHFD 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ WF IAA G L+IA GI + ++Q  VS++ R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 499 DPSLQKWFIIAAIGALIIAAGIGAMLVQFYVSWKNREKLRDVTGDPWGGRTLEWATSSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+SDSW  MK NN+K P   F  I MPKNT  G +IS  +  +GFA+VW
Sbjct: 559 PDYNFAFTPVVHESDSWADMKANNYKRPTKGFVAIHMPKNTAAGFIISALTFALGFAMVW 618

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            MW+   ++F+  ++ +I +TFNYKR+YYI +EE+   E+   RL
Sbjct: 619 QMWIPAALAFVAMMVAIITHTFNYKRDYYIPAEEVVRTEEAHTRL 663


>gi|393764959|ref|ZP_10353555.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium sp.
           GXF4]
 gi|392729592|gb|EIZ86861.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium sp.
           GXF4]
          Length = 666

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/584 (69%), Positives = 489/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQAI+FGS  G+LPP HY+QIFTAHG+IMIFFVAMP VTG++NF V
Sbjct: 78  MLLRGFADALLMRSQQAIAFGSEQGFLPPHHYDQIFTAHGMIMIFFVAMPFVTGMMNFAV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  G ILVM+SLF+GEF+   WL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVAGGILVMVSLFVGEFSRATWLAYPPLSGAAMSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAGIGTLLSGIN+IATI+KMRAPGM +M +PIF W++LCTNILIVAAFP+LT
Sbjct: 198 DYYIWALQIAGIGTLLSGINLIATIVKMRAPGMTMMKLPIFVWSSLCTNILIVAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDRY+GTHFFTNDLGGN M+Y NLIWIWGHPEVYIL+LP FG+FSE+ STF  
Sbjct: 258 AVLAMLSLDRYVGTHFFTNDLGGNAMLYFNLIWIWGHPEVYILILPAFGVFSEITSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYA VVIT+L+Y+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNW+
Sbjct: 318 KRLFGYTSMVYALVVITILAYLVWLHHFFTMGSGADVNSFFGITTMIISIPTGAKIFNWM 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP++W + F++TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMMWVVAFIVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+ +WFPKAFG+KL+ FWGK +  FW+ GFYVAFMPLY+LG MGVTRRM HF+
Sbjct: 438 VLFGMFAGVTFWFPKAFGFKLDEFWGKMALVFWVSGFYVAFMPLYVLGLMGVTRRMQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI S I+  +VS R R  L D+TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFVIAACGAGLIALGIASQIVMFVVSIRNREKLRDLTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H SD+WW MK   F  P   ++ I MPKNT  G +++  +   G A+VW
Sbjct: 558 PDYNFAFTPVVHDSDAWWDMKNRGFARPMTGYKPIHMPKNTAAGAILAGLNFTFGLAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SF+  +++ I +TFNY R+YYI ++ ++  E +R R
Sbjct: 618 YVWWLAALSFVAIILVAILHTFNYNRDYYIPADTVSRTEGQRTR 661


>gi|374572246|ref|ZP_09645342.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM471]
 gi|374420567|gb|EHR00100.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM471]
          Length = 665

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 491/585 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 76  MLLRGFADALMMRLQQALAFGGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNFVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TI+K+R PGM +M MP+FTWTALCTN+LIVA+FPVLT
Sbjct: 196 DYYIWGLQVAGVGTTLSGINLICTIVKLRCPGMTMMRMPVFTWTALCTNVLIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFELPMMWTIAFMLTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+PFWGK SFWFW+ GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 436 VVFGAFAGIGYWFPKAFGFKLDPFWGKLSFWFWVTGFYLAFMPLYVLGLMGVTRRLRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +A  G  L+ +GILS ++Q  VS+ +R  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 496 DPSLQIWFIVAGIGAFLVFLGILSMLMQFAVSFLRREQLKDVTGDPWDARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MKK  ++ P   F+ I MP +T  GI+++  +  MGF L+W
Sbjct: 556 PAYNFAFTPVVHDNDAWWDMKKRGYQRPLTGFKPIHMPSSTGTGIILAGLATAMGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SFI  L + I +TFNY R++ I ++++   E  R +L
Sbjct: 616 YIWWLAAASFIAMLAVGIGHTFNYHRDFDIPADDVIRAEDARTKL 660


>gi|386399867|ref|ZP_10084645.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM1253]
 gi|385740493|gb|EIG60689.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM1253]
          Length = 665

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 491/585 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQA++FG S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++NF+V
Sbjct: 76  MLLRGFADALMMRLQQALAFGGSEGYLNSHHYDQVFTAHGVIMIFFVAMPLVTGLMNFVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TI+K+R PGM +M MP+FTWTALCTN+LIVA+FPVLT
Sbjct: 196 DYYIWGLQVAGVGTTLSGINLICTIVKLRCPGMTMMRMPVFTWTALCTNVLIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRFELPMMWTIAFMLTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+PFWGK SFWFW+ GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 436 VVFGAFAGIGYWFPKAFGFKLDPFWGKLSFWFWVTGFYLAFMPLYVLGLMGVTRRLRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +A  G  L+ +GILS ++Q  VS+ +R  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 496 DPSLQIWFIVAGIGAFLVFLGILSMLMQFAVSFLRREQLKDVTGDPWDARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+  ++ P   F+ I MP +T  GI+++  +  MGF L+W
Sbjct: 556 PAYNFAFTPVVHDNDAWWDMKRRGYQRPLTGFKPIHMPSSTGTGIILAGLATAMGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SFI  L + I +TFNY R++ I +E++   E  R +L
Sbjct: 616 YIWWLAAASFIAMLAVGIGHTFNYHRDFDIPAEDVIRAEDARTKL 660


>gi|326317719|ref|YP_004235391.1| cytochrome o ubiquinol oxidase subunit I [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374555|gb|ADX46824.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 668

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/582 (73%), Positives = 496/582 (85%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQAI+FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 80  MLLRGFADAVMMRLQQAIAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ GAILVMISLF+GEF+++GWL    L   AQ+PG G+
Sbjct: 140 PLQIGARDVAFPFLNNFSFWMTTAGAILVMISLFLGEFSTSGWLALSNLG--AQNPGTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TIIKMRAPGM LM MPIFTWT+LCTN LIVA+FPVLT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPIFTWTSLCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTND GGN M+YVNLIWIWGHPEVYILVLP FGIFSEVV+TF  
Sbjct: 258 AALVLMSLDRYVGTNFFTNDFGGNPMLYVNLIWIWGHPEVYILVLPAFGIFSEVVATFCR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WT+ FM TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMMWTVAFMATFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYWFPKAFGYKL+  WG  SFW W++GF+VAF PLYILG MGVTRR++HFE
Sbjct: 438 VLFGLFAGINYWFPKAFGYKLDRTWGLRSFWLWVVGFWVAFAPLYILGLMGVTRRVNHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA+GI  F++QL+VSY KR  L D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAAGAGLIALGIGCFLMQLVVSYLKRDQLRDFTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +H+ D+WW MKK+ +  P   FQ I MP NT  G +IS FSL++GFAL+W
Sbjct: 558 PQYNFAFTPRVHEIDAWWDMKKHGYTRPLSGFQPIHMPANTGAGAVISAFSLVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           HMWLL  +SF   ++  I +TFNYKR++YI ++E+   E+ R
Sbjct: 618 HMWLLAGVSFAGIVLAAIIHTFNYKRDFYIPADEVNTTEEAR 659


>gi|384213891|ref|YP_005605054.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum
           USDA 6]
 gi|354952787|dbj|BAL05466.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum
           USDA 6]
          Length = 665

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/585 (70%), Positives = 493/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++F  S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 76  MLLRGFADALMMRGQQMLAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TI+K+R PGM +M MP+FTWT+LCTNILIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIVKLRCPGMTMMKMPVFTWTSLCTNILIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P+LWTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRYELPMLWTIAFMLTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPKAFG+KL+ FWGK SFWFW++GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 436 VVFGAFAGINYWFPKAFGFKLDVFWGKLSFWFWVVGFYLAFMPLYVLGLMGVTRRLRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  L+ +GILS ++Q  VS+ KR  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 496 DPSLQIWFVIAAIGAFLVFLGILSMLMQFAVSFLKREQLKDVTGDPWDARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MKK  ++ P   F+ I MP +T  GI+++ F+  MGF L+W
Sbjct: 556 PDYNFAFTPVVHDNDAWWDMKKRGYQRPLTGFRPIHMPSSTGTGIILAGFATAMGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SFI  L++ I +TFNY R++ I +E++   E  R +L
Sbjct: 616 YIWWLAAASFIAMLVVGIGHTFNYHRDFDIPAEDVIRTEDARTKL 660


>gi|407940062|ref|YP_006855703.1| cytochrome o ubiquinol oxidase subunit I [Acidovorax sp. KKS102]
 gi|407897856|gb|AFU47065.1| cytochrome o ubiquinol oxidase subunit I [Acidovorax sp. KKS102]
          Length = 667

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/582 (71%), Positives = 495/582 (85%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 80  MLLRGFADAVMMRLQQAMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM+SLF+GEF+++GWL    L   AQSP  G+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMVSLFLGEFSTSGWLALSNLG--AQSPSTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWALQIAGVGTTLSGINLIVTIIKMRAPGMSLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYILVLP FG+FSEVV+TFS 
Sbjct: 258 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILVLPAFGVFSEVVATFSK 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMMWTVAFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFGYKL+  WG  SFW WL+GF+VAF PLY+LG MGVTRR +HFE
Sbjct: 438 VVFAMFAGINYWFPKAFGYKLDRTWGVRSFWLWLVGFWVAFTPLYVLGLMGVTRRANHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA GI  F+IQL+VS+ KR  L D TGDPW+GRTLEW+TSSPP
Sbjct: 498 DQSLQIWFVIAAIGAAMIAAGIGCFLIQLVVSFLKREQLRDWTGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MKK+ +K P   FQ I MP NT  G++IS  SL+ GFAL+W
Sbjct: 558 PNYNFAFTPVVHEIDAWWDMKKHGYKRPLAGFQPIHMPANTGAGVVISGLSLVFGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           HMWLL  +SF   ++  I +TFNYKR++YI + E+   E+ R
Sbjct: 618 HMWLLAAVSFAAVVLAAIVHTFNYKRDFYIPASEVISTEEAR 659


>gi|398824860|ref|ZP_10583177.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           YR681]
 gi|398224440|gb|EJN10745.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           YR681]
          Length = 665

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/585 (69%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++FG S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 76  MLLRGFADALMMRGQQMLAFGGSEGYLNAHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TI+K+R PGM +M MP+FTWT+LCTNILIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIVKLRCPGMTMMKMPVFTWTSLCTNILIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRYELPMMWTIAFMLTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPKAFG+KL+ FWGK SFWFW++GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 436 VVFGAFAGINYWFPKAFGFKLDVFWGKLSFWFWVVGFYLAFMPLYVLGLMGVTRRLRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  L+ +GILS ++Q  VS+ KR  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 496 DPSLQIWFVIAAIGAFLVFLGILSMLMQFAVSFLKREQLKDVTGDPWDARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+  ++ P   F+ I MP +T  GI+++ F+  MGF L+W
Sbjct: 556 PDYNFAFTPVVHDNDAWWDMKRRGYQRPLTGFKPIHMPSSTGTGIILAGFATAMGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SFI  L++ I +TFNY R++ I ++++   E  R +L
Sbjct: 616 YIWWLAAASFIAMLVVGIGHTFNYHRDFDIPADDVIRTEDARTKL 660


>gi|383768922|ref|YP_005447985.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium sp.
           S23321]
 gi|381357043|dbj|BAL73873.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium sp.
           S23321]
          Length = 665

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/585 (69%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++FG S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 76  MLLRGFADALMMRGQQMLAFGGSEGYLNAHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TI+K+R PGM +M MP+FTWT+LCTNILIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIVKLRCPGMTMMKMPVFTWTSLCTNILIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRYELPMMWTIAFMLTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPKAFG+KL+ FWGK SFWFW+IGFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 436 VVFGAFAGINYWFPKAFGFKLDVFWGKLSFWFWVIGFYLAFMPLYVLGLMGVTRRLRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  L+ +GILS ++Q  VS+ KR  L D+TGDPW+ RTLEW+TSSPP
Sbjct: 496 DPSLQIWFVIAAIGAFLVFLGILSMLMQFAVSFLKREQLKDVTGDPWDARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MK+  ++ P   F+ I MP +T  G++++ F+  MGF L+W
Sbjct: 556 PDYNFAFTPVVHDNDAWWDMKRRGYQRPLTGFKPIHMPSSTGTGVILAGFATAMGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SFI  L++ I +TFNY R++ I ++++   E  R +L
Sbjct: 616 YIWWLAAASFIAMLVVGIGHTFNYHRDFDIPADDVIRTEDARTKL 660


>gi|395492748|ref|ZP_10424327.1| cytochrome-c oxidase [Sphingomonas sp. PAMC 26617]
          Length = 668

 Score =  868 bits (2242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/582 (70%), Positives = 487/582 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++F  S GYL   HY+Q+FTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFSDAIMMRAQQAMAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+++M+SLF+GEFA TGWL  PPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVIIMMSLFVGEFAQTGWLAMPPLSGIGFSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N+IATI+KMRAPGM +M MPIF WTALCTNILIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGVNLIATIVKMRAPGMTMMKMPIFCWTALCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY  T FFTN LGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 258 AVLALLSLDRYADTAFFTNTLGGNPMMYVNLIWIWGHPEVYILILPMFGVFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+SMVYAT+VITLL+Y+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRIFGYTSMVYATMVITLLAYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE+P++WTI FMITF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRVRFELPMMWTIAFMITFTIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPKAFG+KL  FWGK SFW W++GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VVFGAFAGINYWFPKAFGFKLNEFWGKVSFWCWVVGFYLAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G LL+A GI + ++Q  VS R R  L D TGDPWNGRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAGIGALLVAAGIAAMLLQFAVSIRDREKLRDTTGDPWNGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IHQ D+W  MK   ++ P   ++DI MP NT  G++++   +  G  ++W
Sbjct: 558 PDYNFAFTPVIHQGDAWADMKARGYERPTTGYKDIHMPSNTGSGVILAGLCVAFGVGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           ++W L  +SF+  L + I +TF YKR++YI +  +T  E+ R
Sbjct: 618 YVWWLAAVSFVAILAVAIGHTFIYKRDFYIPAATVTAKEEAR 659


>gi|404253138|ref|ZP_10957106.1| cytochrome-c oxidase [Sphingomonas sp. PAMC 26621]
          Length = 668

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/582 (70%), Positives = 487/582 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++F  S GYL   HY+Q+FTAHGVIMIFFVAMP VTG++N++V
Sbjct: 78  MLLRGFSDAIMMRAQQAMAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+++M+SLF+GEFA TGWL  PPLSGI  SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVIIMMSLFVGEFAQTGWLAMPPLSGIGFSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N+IATI+KMRAPGM +M MPIF WTALCTNILIVAAFPVLT
Sbjct: 198 DYYIWSLQIAGVGTLLSGVNLIATIVKMRAPGMTMMKMPIFCWTALCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY  T FFTN LGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 258 AVLALLSLDRYADTAFFTNTLGGNPMMYVNLIWIWGHPEVYILILPMFGVFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+SMVYAT+VITLL+Y+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRIFGYTSMVYATMVITLLAYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE+P++WTI FMITF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRVRFELPMMWTIAFMITFTIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPKAFG+KL  FWGK SFW W++GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VVFGAFAGINYWFPKAFGFKLNEFWGKVSFWCWVVGFYLAFMPLYVLGLMGVTRRLRTFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G LL+A GI + ++Q  VS R R  L D TGDPWNGRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAGIGALLVAAGIAAMLLQFAVSIRDREKLRDTTGDPWNGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IHQ D+W  MK   ++ P   ++DI MP NT  G++++   +  G  ++W
Sbjct: 558 PDYNFAFTPVIHQGDAWADMKARGYERPTTGYKDIHMPSNTGSGVILAGLCVAFGVGMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           ++W L  +SF+  L + I +TF YKR++YI +  +T  E+ R
Sbjct: 618 YVWWLAAVSFVAILGVAIGHTFIYKRDFYIPAATVTAKEEAR 659


>gi|91975076|ref|YP_567735.1| cytochrome-c oxidase [Rhodopseudomonas palustris BisB5]
 gi|91681532|gb|ABE37834.1| Cytochrome-c oxidase [Rhodopseudomonas palustris BisB5]
          Length = 669

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/585 (70%), Positives = 499/585 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQA++F  S GYL   HY+QIFTAHGVIMIFFVAMP+VTG++N++V
Sbjct: 78  MLLRGFADAIMMRIQQAMAFNGSEGYLNAHHYDQIFTAHGVIMIFFVAMPMVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVMISLF+GEFA TGWL YPPLS I  SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMISLFVGEFARTGWLAYPPLSNIGYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GTLLSG+N+I TI+K+RAPGM +M MPIFTWT+LCTNILIVA+FPVLT
Sbjct: 198 DYYIWSLQVAGVGTLLSGVNLICTIVKLRAPGMTMMRMPIFTWTSLCTNILIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV +TFS 
Sbjct: 258 AVLALLTLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPAFGIFSEVAATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+++P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRYDLPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+ FWGK SFW W++GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VVFGAFAGIAYWFPKAFGFKLDVFWGKVSFWCWVVGFYFAFMPLYVLGLMGVTRRLRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S QIWF IAAFG  L+ +GI++F+IQ+ VS  +R  L D+TGDPWNGRTLEW+TSSPP
Sbjct: 498 DPSYQIWFAIAAFGAFLVLIGIVAFLIQIAVSVMRREQLRDVTGDPWNGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++  +D+WW MKK+ +  P   F+ I MP NT  G++++  S +M F L+W
Sbjct: 558 PDYNFAFTPMVRDADAWWDMKKHGYSRPLGGFKPIHMPSNTGTGVILAGLSTVMSFGLIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SFI  L + I +TFNY R+Y+I ++E+  +E +R RL
Sbjct: 618 YIWWLAALSFIALLAVAIGHTFNYHRDYHIPADEVVRVEDERTRL 662


>gi|351729360|ref|ZP_08947051.1| cytochrome o ubiquinol oxidase, subunit I [Acidovorax radicis N35]
          Length = 667

 Score =  866 bits (2238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/582 (72%), Positives = 494/582 (84%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQA++FG + GYLPP HY+QIFTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 80  MLLRGFADAVMMRLQQAMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPLVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAILVM+SLF+GEF+++GWL    L   AQ PGVG+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTAGAILVMVSLFLGEFSTSGWLALSNLG--AQDPGVGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWALQIAGVGTTLSGINLIVTIIKMRAPGMNLMRMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTNDLGGN M+YVNLIWIWGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 258 AALVLMSLDRYVGTNFFTNDLGGNAMLYVNLIWIWGHPEVYILILPCFGIFSEVVATFCK 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMMWTVAFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYW+PKAFGYKL+  WG  SFW W++GF+VAF PLY+LG MGVTRR +HFE
Sbjct: 438 VLFGLFAGINYWYPKAFGYKLDRTWGVRSFWLWVVGFWVAFGPLYVLGLMGVTRRANHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA GI  F+IQ++VSY KR  L D TGDPW+ RTLEW+TSSPP
Sbjct: 498 DQSLQIWFVIAAIGAAMIAAGIACFLIQIVVSYLKRDQLRDHTGDPWDARTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MKK+ ++ P   F  I MP NT  G +IS  SL  GFAL+W
Sbjct: 558 PDYNFAFTPVVHEIDAWWDMKKHGYQRPLTGFAPIHMPANTGSGAVISALSLAFGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           HMWLL  +SF + L+  I +TFNYKR++YI + ++   EK R
Sbjct: 618 HMWLLAGVSFAMLLLASIIHTFNYKRDFYIPASDVIATEKAR 659


>gi|220924642|ref|YP_002499944.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium nodulans
           ORS 2060]
 gi|219949249|gb|ACL59641.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           nodulans ORS 2060]
          Length = 667

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/582 (70%), Positives = 489/582 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG++ GYLPP HY+QIF+AHGVIMIFF+AMP VTG++N++V
Sbjct: 78  MLLRGFADALMMRAQQAVAFGANEGYLPPHHYDQIFSAHGVIMIFFMAMPFVTGLMNYVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN S WMT  GA+ VMISLF+GEFA TGWL +PPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSLWMTVSGAVTVMISLFVGEFARTGWLAFPPLSGADMSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAGIGT LSGIN+IATI+KMRAPG+ +M +PIF WT+LCTNILIVAAFPVLT
Sbjct: 198 DYYIWALQIAGIGTTLSGINLIATIVKMRAPGLTMMKLPIFVWTSLCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GTHF+TNDLGGN MMY NLIWIWGHPEVYIL+LP FGIFSEV STF  
Sbjct: 258 ATLALLSLDRYVGTHFYTNDLGGNPMMYFNLIWIWGHPEVYILILPAFGIFSEVTSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYASMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+++G+NYWFPKAFG++L+PFWGK SFW W++GFYVAFMPLY+LG MGVTRR+ HF+
Sbjct: 438 VLFGMLAGVNYWFPKAFGFRLDPFWGKVSFWCWVVGFYVAFMPLYVLGLMGVTRRVQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ+WF  AA G +LI  GIL+ ++Q  VS  +R  L D+TGDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQVWFVTAAIGAVLILFGILAILMQFAVSILRRGKLRDLTGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+WW MKK  +  P   F+ I MPKNT  G ++   S+   FA+VW
Sbjct: 558 PEYNFAFTPVVHDLDAWWDMKKRGYSRPLIGFKPIHMPKNTGTGAILGAISIAFSFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           ++W L  +SF+  L + I +TFNY R++ I +E +   E   
Sbjct: 618 YIWWLAALSFVAMLAVTIIHTFNYNRDFTIPAEVVVRTEDAH 659


>gi|170748150|ref|YP_001754410.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654672|gb|ACB23727.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium
           radiotolerans JCM 2831]
          Length = 666

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/584 (69%), Positives = 489/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQA++FG   G+LPP HY+QIFTAHG+IMIFFVAMP VTG++NF V
Sbjct: 78  MLLRGFADAILMRSQQAVAFGDQQGFLPPHHYDQIFTAHGMIMIFFVAMPFVTGLMNFAV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  G +LVM+SLF+GEF+   WL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTVAGGLLVMVSLFVGEFSRATWLAYPPLSGAAMSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAGIGTLLSGIN++ATI+KMRAPGM +M +PIF W+ALCTNILIVAAFP+LT
Sbjct: 198 DYYIWALQIAGIGTLLSGINLVATIVKMRAPGMTMMKLPIFVWSALCTNILIVAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDRY+GTHFFTNDLGGN M+Y NLIWIWGHPEVYIL+LP FG+FSE+ STF  
Sbjct: 258 AVLAMLSLDRYVGTHFFTNDLGGNAMLYFNLIWIWGHPEVYILILPAFGVFSEITSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYA VVIT+L+Y+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNW+
Sbjct: 318 KRLFGYTSMVYALVVITILAYLVWLHHFFTMGSGADVNSFFGITTMIISIPTGAKIFNWM 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFEVP++W + F++TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFEVPMMWVVAFIVTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+ +WFPKAFG+KL+ FWGK +  FW+ GFYVAFMPLY+LG MGVTRRM HF+
Sbjct: 438 VLFGMFAGVTFWFPKAFGFKLDEFWGKMALGFWVTGFYVAFMPLYVLGLMGVTRRMQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA GI S I+  +VS R R  L D++GDPW GRTLEWSTSSPP
Sbjct: 498 DPSLQIWFVIAAIGAALIACGIASQIVMFVVSIRNRDKLRDLSGDPWGGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H SD+WW MK   F  P   ++ I MPKNT  G +++  +LI G A+VW
Sbjct: 558 PDYNFAFTPVVHDSDAWWDMKNRGFDRPLKGYKPIHMPKNTAAGAILAALNLIFGLAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L I+SF+   ++ I +TFNY R+YYI ++ ++  E +R R
Sbjct: 618 YVWWLAILSFVAIFVVAIAHTFNYNRDYYIPADVVSRTEGQRTR 661


>gi|27375261|ref|NP_766790.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum
           USDA 110]
 gi|27348397|dbj|BAC45415.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum
           USDA 110]
          Length = 665

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/585 (69%), Positives = 492/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++FG S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 76  MLLRGFADALMMRGQQMLAFGGSEGYLNAHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+I TI+K+R PGM +M MP+FTWT+LCTNILIVA+FPVLT
Sbjct: 196 DYYIWALQVAGVGTTLSGINLICTIVKLRCPGMTMMKMPVFTWTSLCTNILIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRYELPMMWTIAFMLTFVLGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPKAFG+KL+ FWGK SFWFW++GFY+AFMPLY+LG MGVTRR+  F+
Sbjct: 436 VVFGAFAGINYWFPKAFGFKLDVFWGKLSFWFWVVGFYLAFMPLYVLGLMGVTRRLRVFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  L+ +GILS ++Q  VS+ KR  L D++GDPW+ RTLEW+TSSPP
Sbjct: 496 DPSLQIWFVIAAIGAGLVFLGILSMLMQFAVSFLKREQLKDVSGDPWDARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +D+WW MKK  ++ P   F+ I MP +T  GI+++  +  MGF L+W
Sbjct: 556 PDYNFAFTPVVHDNDAWWDMKKRGYQRPLIGFKPIHMPSSTGTGIILAGLATAMGFGLIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SFI  L + I +TFNY R++ I ++++   E  R +L
Sbjct: 616 YIWWLAAASFIAMLAVGIGHTFNYHRDFDIPADDVIRTEDARTKL 660


>gi|260221201|emb|CBA29528.1| Ubiquinol oxidase subunit 1 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 667

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/582 (71%), Positives = 493/582 (84%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQA++FG + GYLPP HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 80  MLLRGFADAVMMRLQQAMAFGDNMGYLPPHHYDQVFTAHGVIMIFFVAMPLVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ G +LVM SLF+GEF+++GWL    L   AQSP  G+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTAGGVLVMFSLFLGEFSTSGWLALSNLG--AQSPSTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWALQIAGVGTTLSGINLIVTIIKMRAPGMSLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+V+TFS 
Sbjct: 258 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPAFGVFSEIVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WT+ FMITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYKGRIRFELPMMWTVAFMITFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFGYKL+  WG  SFW W++GF+VAF PLYILG MGVTRR +HFE
Sbjct: 438 VVFAMFAGINYWFPKAFGYKLDRTWGVRSFWLWVVGFWVAFTPLYILGLMGVTRRANHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA GI  F+IQL+VSY KR  L D TGDPW GRTLEW+TSSPP
Sbjct: 498 DQSLQIWFVIAAIGAALIAAGIGCFLIQLLVSYLKREELRDWTGDPWGGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MKK++++ P   F+ I MP NT  G++IS  SL+ GFAL+W
Sbjct: 558 PDYNFAFTPVVHEIDAWWDMKKHSYQRPLTGFESIHMPSNTAAGVVISGLSLVFGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           HMWLL  +SF   LI  I +TFNY R++YI + ++T  E+ R
Sbjct: 618 HMWLLAGVSFAALLIAAIVHTFNYHRDFYIPAAQVTATEEAR 659


>gi|329890318|ref|ZP_08268661.1| cytochrome o ubiquinol oxidase, subunit I [Brevundimonas diminuta
           ATCC 11568]
 gi|328845619|gb|EGF95183.1| cytochrome o ubiquinol oxidase, subunit I [Brevundimonas diminuta
           ATCC 11568]
          Length = 670

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/584 (70%), Positives = 490/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR+QQA++FG S GYL   HY+QIFTAHGVIMIFFVAMP++TG++N++V
Sbjct: 77  MFLRGFADAIMMRIQQAMAFGGSEGYLNAHHYDQIFTAHGVIMIFFVAMPMITGLMNYLV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLFIGEFA TGWL YPPLSGI  SPGVGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTTMGAVLVMASLFIGEFARTGWLAYPPLSGIGYSPGVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC N+LIVA+FP+LT
Sbjct: 197 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMGLMKMPVFTWTSLCANVLIVASFPILT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L + DRYIGT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 257 ATLVLLSADRYIGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 317 KKLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG+KLE  WG  SFW W++GF++AFMPLY+LGFMGVTRRM  F+
Sbjct: 437 VLFGLFAAINYWWPKAFGFKLEKKWGLVSFWCWVVGFWMAFMPLYVLGFMGVTRRMRVFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + QIWF IAA G  +IA+GIL+ +IQ  VS   R  L D TGDPW+GRTLEW+TSSPP
Sbjct: 497 DPAYQIWFIIAAVGVAIIAVGILAMLIQFAVSIINRDKLRDETGDPWHGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P+IH  D+WW MK   ++ P   F+ I MP NT  G ++S  SLI+GFAL+W
Sbjct: 557 PDYNFAKTPIIHDGDAWWDMKARGYERPTGGFKPIHMPSNTGAGFILSALSLIVGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L   SF   +   I++TFNYKR+YYI +E +   E  R +
Sbjct: 617 YIWWLAAASFAALIAYAIFHTFNYKRDYYIPAETVQATEDARTK 660


>gi|429771196|ref|ZP_19303223.1| cytochrome o ubiquinol oxidase, subunit I [Brevundimonas diminuta
           470-4]
 gi|429182329|gb|EKY23440.1| cytochrome o ubiquinol oxidase, subunit I [Brevundimonas diminuta
           470-4]
          Length = 670

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/580 (70%), Positives = 486/580 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR+QQA++FG S GYL   HY+QIFTAHGVIMIFFVAMP++TG++N++V
Sbjct: 77  MFLRGFADAIMMRIQQAMAFGGSEGYLNAHHYDQIFTAHGVIMIFFVAMPMITGLMNYLV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLFIGEFA TGWL YPPLSGI  SPGVGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTTMGAVLVMASLFIGEFARTGWLAYPPLSGIGYSPGVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC NILIVA+FP+LT
Sbjct: 197 DYYIWALQIAGVGTTLSGINLIATIVKMRAPGMGLMKMPVFTWTSLCANILIVASFPILT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L + DRYIGT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 257 ATLVLLSADRYIGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 317 KKLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG+KLE  WG  SFW W++GF++AFMPLY+LGFMGVTRRM  F+
Sbjct: 437 VLFGLFAAINYWWPKAFGFKLEKKWGLVSFWCWVVGFWMAFMPLYVLGFMGVTRRMRVFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + QIWF IA  G  +IA+GIL+ +IQ  VS   R  L D TGDPW GRTLEW+TSSPP
Sbjct: 497 DPAYQIWFIIAGVGVAIIAVGILAMLIQFAVSIINRDKLRDETGDPWQGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P+IH  D+WW MK   ++ P   F+ + MP NT  G ++S  SL++GFAL+W
Sbjct: 557 PDYNFAKTPIIHDGDAWWDMKARGYQRPTGGFKAVHMPSNTGAGFILSALSLVLGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           ++W L   SF   +   I++TFNY+R+YYI +E +   E 
Sbjct: 617 YIWWLAAASFAALIGYAIFHTFNYRRDYYIPAETVQATED 656


>gi|254419355|ref|ZP_05033079.1| cytochrome o ubiquinol oxidase, subunit I [Brevundimonas sp. BAL3]
 gi|196185532|gb|EDX80508.1| cytochrome o ubiquinol oxidase, subunit I [Brevundimonas sp. BAL3]
          Length = 647

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/584 (71%), Positives = 492/584 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMRLQQA++FG S GYL   HY+Q+FTAHGVIMIFFVAMP+VTGI+N++V
Sbjct: 57  MFVRGFADAIMMRLQQAMAFGGSEGYLNAHHYDQVFTAHGVIMIFFVAMPMVTGIMNYVV 116

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI+VM SLF+GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 117 PLQIGARDVSFPFLNNFSFWMTTAGAIIVMASLFVGEFARTGWLAYPPLSGIGYSPGVGV 176

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+IATI+KMRAPGM +M MPIFTWT+LCTN+LIVA+FPVLT
Sbjct: 177 DYYIWALQIAGVGTTLSGINLIATIVKMRAPGMGMMKMPIFTWTSLCTNVLIVASFPVLT 236

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 237 AVLALLTLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVASTFSG 296

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 297 KKLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 356

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++W + FM+TFVIGG+ GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 357 FTMYRGRIRFELPMMWLVAFMLTFVIGGLTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 416

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + IN+W+PKAFG++L  FWG  SFW W+ GF++AF PLY+LG MGVTRRM  F+
Sbjct: 417 VLFGLFAAINFWWPKAFGFRLNKFWGLVSFWCWVPGFWLAFAPLYVLGLMGVTRRMRVFD 476

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA+GI +  IQ  VS   R  L DITGDPW GRTLEW+TSSPP
Sbjct: 477 DPSLQIWFVIAAIGAGVIALGIAAMFIQFAVSIINRDKLRDITGDPWGGRTLEWATSSPP 536

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P+IH SD+WW MKK  ++ P   ++ I MP NT  G++IS   L+MG AL+W
Sbjct: 537 PAYNFASTPVIHDSDAWWDMKKKGYQRPLSGYRAIHMPSNTGTGVIISGLCLVMGLALIW 596

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  ++F+  L + I +TFNYKR+YYI  +E+   E+ R R
Sbjct: 597 YIWWLAALTFVGVLAVSIAHTFNYKRDYYIPEDEVRETEEARTR 640


>gi|332184919|ref|ZP_08386668.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas sp. S17]
 gi|332014643|gb|EGI56699.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas sp. S17]
          Length = 664

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/585 (68%), Positives = 495/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + G+L   HY+Q+FTAHGVIMIFFVAMP++TG++N++V
Sbjct: 75  MLLRGFADALMMRGQQAIAFGDNQGFLNSHHYDQVFTAHGVIMIFFVAMPIITGLMNYVV 134

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FP+LNNLSFWMT+GG +LVM SLFIGEFA TGWL +PPLS +  SP VGV
Sbjct: 135 PLQIGARDVSFPYLNNLSFWMTAGGVVLVMASLFIGEFARTGWLAFPPLSELDFSPDVGV 194

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATIIKMRAPGM +M +P+F WT+LC N+LIVA+FPVLT
Sbjct: 195 DYYIWALQVAGVGTTLSGINLIATIIKMRAPGMTMMKLPVFCWTSLCANVLIVASFPVLT 254

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 255 ATLVLLSLDRYVGTNFFTNNLGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 314

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+VIT+LSY+VWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAKIFNWL
Sbjct: 315 KRLFGYTSMVYATIVITILSYLVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKIFNWL 374

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WTI FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 375 FTMYKGRIRFELPMMWTIAFMLTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 434

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  + INYW+PKAFG+KL  FWGK SFW W+IGF+VAF PLYI+G MGVTRR+ HF+
Sbjct: 435 VLFGAFAAINYWWPKAFGFKLNQFWGKVSFWLWVIGFWVAFTPLYIMGLMGVTRRLHHFD 494

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQI+F +A  G L+IA GI +F++Q+ VS  K+  L D+TGDPW+GRTLEW+TSSPP
Sbjct: 495 DPSLQIYFIVALLGALMIAGGIGAFLVQIGVSIWKKEELRDVTGDPWDGRTLEWATSSPP 554

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH+ D+W+ MK    + P + ++ I MPKNT  G++I+  S   GF ++W
Sbjct: 555 PDYNFAFTPVIHELDAWYDMKDKKAQAPVEGYRPIHMPKNTGTGVIIAALSTAAGFGMIW 614

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  I+ I  +++ I++TFNY R++YI  EE+   E +R RL
Sbjct: 615 YMWWLAAIALIGVVVVAIWHTFNYDRDFYIPVEEVVATESERRRL 659


>gi|417862677|ref|ZP_12507727.1| cytochrome o ubiquinol oxidase, subunit I [Agrobacterium
           tumefaciens F2]
 gi|338819939|gb|EGP53913.1| cytochrome o ubiquinol oxidase, subunit I [Agrobacterium
           tumefaciens F2]
          Length = 666

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/585 (70%), Positives = 494/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI+F  + GYL  +HY+QIFTAHGVIMIFFVAMP +TG +N+IV
Sbjct: 77  MLLRGFADAIMMRIQQAIAFNGNEGYLNADHYDQIFTAHGVIMIFFVAMPFITGFMNYIV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GAI++MISLF+GEFA TGWL YPPLSG   SPGVGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTTAGAIIIMISLFVGEFAKTGWLAYPPLSGADYSPGVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AGIGT LSGIN++ATI+KMRAPGM LM MP+FTWT+LCTNILIVA FP+LT
Sbjct: 197 DYYIWGLQVAGIGTTLSGINLVATIVKMRAPGMSLMKMPVFTWTSLCTNILIVATFPILT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+ T+FFTNDLGGN MMYVNLIW+WGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 257 ATLALLTADRYLDTNFFTNDLGGNPMMYVNLIWMWGHPEVYILILPAFGIFSEVASTFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I LLSY+VWLHHFFTMG+GA+VNAFFGI TMIISIPTGAK+FNWL
Sbjct: 317 KRLFGYASMVYATCTIMLLSYVVWLHHFFTMGAGASVNAFFGIATMIISIPTGAKMFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIR+E+P+ W IGFM+TFVIGGM GV+LA+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYKGRIRYELPMYWLIGFMVTFVIGGMTGVMLAIPPADFVLHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGLM+G+ YW+PKAFG+KL+PFWGK SFWFW IGF+VAFMPLY+LG MGVTRR+S F+
Sbjct: 437 VLFGLMAGVTYWWPKAFGFKLDPFWGKMSFWFWQIGFFVAFMPLYVLGLMGVTRRVSQFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA+GIL FIIQ++VS R+R  L   TGDPW GRTLEW+TSSPP
Sbjct: 497 DPSLQIWFIIAAFGAGLIALGILFFIIQMVVSVRRRDQLRCTTGDPWGGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+W  MK+  +  P   ++ I MP+NT  G+++S  S+ + FAL+W
Sbjct: 557 PEYNFAFTPVVHEMDAWHDMKECGYARPLAGYKAIHMPRNTGAGVILSGISIALAFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L I+SF   +II I +TFNY R++YI +  +  +E  R +L
Sbjct: 617 YIWWLAIVSFAAIIIISIAHTFNYNRDFYIPAATVAEVEDARSKL 661


>gi|221067296|ref|ZP_03543401.1| cytochrome o ubiquinol oxidase, subunit I [Comamonas testosteroni
           KF-1]
 gi|220712319|gb|EED67687.1| cytochrome o ubiquinol oxidase, subunit I [Comamonas testosteroni
           KF-1]
          Length = 668

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/584 (71%), Positives = 491/584 (84%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQ+++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 80  MFLRGFADAVMMRLQQSMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L    QS   G+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--HQSGSTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+V+TFS 
Sbjct: 258 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPCFGVFSEIVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF VP+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFSVPMLWTVGFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFG++L  FWGK SFWFWL+GF+VAF PLYILG MGVTRR +HF+
Sbjct: 438 VVFAVFAGINYWFPKAFGFRLNEFWGKASFWFWLVGFWVAFTPLYILGLMGVTRRANHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA GI  F IQL VS  KR  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAACGAALIAAGIGCFFIQLAVSIWKRDELRDVTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK+ ++ P   F+ I MP NT  G++I+  S ++GFAL+W
Sbjct: 558 PQYNFAFTPVVHDIDAWTDMKKHGYQRPLSGFEPIHMPANTGAGVVIAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW LTI SF+ T++  I +TFNYKR+YYI + E+   E+ R +
Sbjct: 618 HMWPLTIASFVATILASIIHTFNYKRDYYIPAAEVATTEEARTK 661


>gi|418532026|ref|ZP_13097935.1| cytochrome o ubiquinol oxidase, subunit I [Comamonas testosteroni
           ATCC 11996]
 gi|371450821|gb|EHN63864.1| cytochrome o ubiquinol oxidase, subunit I [Comamonas testosteroni
           ATCC 11996]
          Length = 668

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/584 (71%), Positives = 491/584 (84%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQ+++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 80  MFLRGFADAVMMRLQQSMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L    QS   G+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--HQSGSTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+V+TFS 
Sbjct: 258 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPCFGVFSEIVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF VP+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFSVPMLWTVGFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFG++L  FWGK SFWFWL+GF+VAF PLYILG MGVTRR +HF+
Sbjct: 438 VVFAVFAGINYWFPKAFGFRLNEFWGKASFWFWLVGFWVAFTPLYILGLMGVTRRANHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA GI  F IQL VS  KR  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAACGAALIAAGIGCFFIQLAVSIWKRDELRDVTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK+ ++ P   F+ I MP NT  G++I+  S ++GFAL+W
Sbjct: 558 PQYNFAFTPVVHDIDAWTDMKKHGYQRPLSGFEPIHMPANTGAGVVIAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW LTI SF+ T++  I +TFNYKR+YYI + E+   E+ R +
Sbjct: 618 HMWPLTIASFVATILASIIHTFNYKRDYYIPAVEVATTEEARTK 661


>gi|326389121|ref|ZP_08210701.1| cytochrome o ubiquinol oxidase subunit I [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206352|gb|EGD57189.1| cytochrome o ubiquinol oxidase subunit I [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 657

 Score =  855 bits (2209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/584 (69%), Positives = 486/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR+QQAI+F  + G  P  HY+Q+FTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 64  MFLRGFADALMMRMQQAIAFNGNEGIFPAHHYDQVFTAHGVIMIFFVAMPFVTGLMNFVV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA L+M SLFIGEFA TGWL YPPLSG+A SPGVGV
Sbjct: 124 PLQIGARDVSFPFLNNFSFWMTASGAALIMASLFIGEFAQTGWLSYPPLSGLAYSPGVGV 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN++ATIIKMRAPGM +M MP+FTWTALCTN+LI+A+FPVLT
Sbjct: 184 DYYIWALQIAGVGTTLSGINLLATIIKMRAPGMTMMRMPVFTWTALCTNVLIIASFPVLT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP+FG+FSE+ +TFS 
Sbjct: 244 AVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILILPIFGVFSEITATFSG 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYATV IT+LSYIVWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAK+FNWL
Sbjct: 304 KPLFGYTSMVYATVAITILSYIVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKMFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RFE+P+LWT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 364 FTIYRGRVRFELPMLWTVAFMLTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + INYW+PKAFG+KL+PFWGK SFW W+ GF++AF PLYI+G MGVTRRM  F+
Sbjct: 424 VVFGTFAAINYWWPKAFGFKLDPFWGKVSFWCWVPGFWLAFTPLYIMGLMGVTRRMRVFD 483

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ +F +AA G LLIA GI + ++Q   S  KR  L D TGDPW GRTLEWSTSSPP
Sbjct: 484 DPSLQPYFIVAACGALLIAAGIGAMLLQYATSILKRDQLRDETGDPWGGRTLEWSTSSPP 543

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MK      P D F+ I MPK T  G++++  S + GFA++W
Sbjct: 544 PAYNFAFTPIVHDLDTWTDMKAKGVARPVDGFRPIHMPKYTGAGVILAGISTVFGFAMIW 603

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L I SF   L+  I +TFNY R+Y+I +E +  IE++R R
Sbjct: 604 HIWWLAIASFAAILLTAIAHTFNYDRSYHIPAETVARIEEERTR 647


>gi|299532081|ref|ZP_07045475.1| cytochrome o ubiquinol oxidase, subunit I [Comamonas testosteroni
           S44]
 gi|298719743|gb|EFI60706.1| cytochrome o ubiquinol oxidase, subunit I [Comamonas testosteroni
           S44]
          Length = 668

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/584 (70%), Positives = 490/584 (83%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQ+++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 80  MFLRGFADAVMMRLQQSMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L    QS   G+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--HQSGSTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+V+TFS 
Sbjct: 258 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPCFGVFSEIVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF VP+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFSVPMLWTVGFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFG++L  FWGK SFWFWL+GF+VAF PLYILG MGVTRR +HF+
Sbjct: 438 VVFAVFAGINYWFPKAFGFRLNEFWGKASFWFWLVGFWVAFTPLYILGLMGVTRRANHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA GI  F IQL VS  KR  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAACGAALIAAGIGCFFIQLAVSIWKRDELRDVTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK+ ++ P + F+ I MP NT  G++I+  S ++GFAL+W
Sbjct: 558 PQYNFAFTPVVHDIDAWTDMKKHGYQRPLNGFEPIHMPANTGAGVVIAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW L I SF  T++  I +TFNYKR+YYI + E+   E+ R +
Sbjct: 618 HMWPLVIASFAATILASIIHTFNYKRDYYIPAAEVATSEEARTK 661


>gi|264678285|ref|YP_003278192.1| cytochrome C oxidase subunit I [Comamonas testosteroni CNB-2]
 gi|262208798|gb|ACY32896.1| cytochrome c oxidase, subunit I [Comamonas testosteroni CNB-2]
          Length = 668

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/584 (70%), Positives = 489/584 (83%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQ+++FG + GYLPP HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 80  MFLRGFADAVMMRLQQSMAFGDNMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVMISLF+GEF+++GWL    L    QS   G+
Sbjct: 140 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMISLFLGEFSTSGWLALSNLG--HQSGSTGL 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TIIKMRAPGM LM MP+FTWTALCTN LIVA+FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIVTIIKMRAPGMNLMKMPVFTWTALCTNALIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN+LGGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+V+TFS 
Sbjct: 258 AALVLMSLDRYVGTNFFTNELGGNPMLYVNLIWIWGHPEVYILILPCFGVFSEIVATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSY+VWLHHFFTMGSGA+VN FFGITTMIISIPTGAKIFNWL
Sbjct: 318 KRLFGYTSMVYATVCITILSYLVWLHHFFTMGSGASVNTFFGITTMIISIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF VP+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFSVPMLWTVGFMVTFAIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GINYWFPKAFG++L  FWGK SFWFWL+GF+VAF PLYILG MGVTRR +HF+
Sbjct: 438 VVFAVFAGINYWFPKAFGFRLNEFWGKASFWFWLVGFWVAFTPLYILGLMGVTRRANHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  LIA GI  F IQL VS  KR  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFIIAACGAALIAAGIGCFFIQLAVSIWKRDELRDVTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MKK+ ++ P   F+ I MP NT  G++I+  S ++GFAL+W
Sbjct: 558 PQYNFAFTPVVHDIDAWTDMKKHGYQRPLSGFEPIHMPANTGAGVVIAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           HMW L I SF  T++  I +TFNYKR+YYI + E+   E+ R +
Sbjct: 618 HMWPLVIASFAATILASIIHTFNYKRDYYIPAAEVATSEEARTK 661


>gi|393720984|ref|ZP_10340911.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas echinoides
           ATCC 14820]
          Length = 674

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/585 (67%), Positives = 486/585 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF+DA+MMR QQA++F  + GYLPP+HYNQIFTAHGVIMIFFVAMPLV G++NF+V
Sbjct: 82  MFVRGFSDALMMRAQQAMAFNGNPGYLPPDHYNQIFTAHGVIMIFFVAMPLVAGLMNFVV 141

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FP+LNN SFWMT+ GA++ MISLF+G +A TGWL  PPLSGIA SP VGV
Sbjct: 142 PLQIGARDVSFPYLNNFSFWMTTAGAVITMISLFVGNYARTGWLAMPPLSGIAASPDVGV 201

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GTLLSG+N+IATI+KMRAPGM LM MP+F WT+LCTN LIVAAFPVLT
Sbjct: 202 DYYIWGLQVAGVGTLLSGVNLIATIVKMRAPGMTLMKMPVFVWTSLCTNTLIVAAFPVLT 261

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+G  FFTN LGGN MMYVNLIWIWGHPEVYIL+LP FG+FSEVV+TF+S
Sbjct: 262 AVLALLSLDRYVGMQFFTNGLGGNPMMYVNLIWIWGHPEVYILILPAFGVFSEVVATFAS 321

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SM+YAT+VIT+L+Y+VWLHHFFTMGSGA+VN+FF ITTMIISIPTGAKIFNWL
Sbjct: 322 KRLFGYTSMIYATIVITILAYLVWLHHFFTMGSGASVNSFFAITTMIISIPTGAKIFNWL 381

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIR+E+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 382 FTMYHGRIRYELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 441

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GINYW+PKAFG+ L+  WGK  FW W++GF+ AF P+Y LG MGVTRR+S F+
Sbjct: 442 VVFGMFAGINYWWPKAFGFTLDRVWGKRQFWLWVVGFWFAFAPVYALGLMGVTRRLSQFD 501

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ +F +A FG LLI  G  +  +Q  VS+R R  L D+TGDPW+GRTLEWSTSSPP
Sbjct: 502 DASLQPYFLVAGFGALLILAGTGAMFVQFFVSFRNREKLRDVTGDPWDGRTLEWSTSSPP 561

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNF F P+++ +D+WW MK+  +  P   F+ I MPKNT  G++++  S+  GF ++W
Sbjct: 562 PDYNFPFTPVVYDNDAWWDMKRRGYVRPTTGFRKIHMPKNTGTGVILAGLSVAFGFGMIW 621

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++S +    + I ++FNYKR++YI  E++   E +R RL
Sbjct: 622 YMWWLAVVSLVGIFAVAIGHSFNYKRDFYIPVEDVVRTEDERTRL 666


>gi|334141283|ref|YP_004534489.1| cytochrome o ubiquinol oxidase subunit I [Novosphingobium sp. PP1Y]
 gi|333939313|emb|CCA92671.1| cytochrome o ubiquinol oxidase subunit I [Novosphingobium sp. PP1Y]
          Length = 668

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/584 (69%), Positives = 485/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMR+QQ+I+F  + GYL   HY+QIFTAHGVIMIFFVAMP VTG++N+IV
Sbjct: 78  MFLRGFADAVMMRIQQSIAFNGNEGYLNAHHYDQIFTAHGVIMIFFVAMPFVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLS  A SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMMSLFVGEFAQTGWLAYPPLSNFAYSPWVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+IATI+KMRAPGM +M MPIFTWTALCTNILIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLIATIVKMRAPGMTMMRMPIFTWTALCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +V+ + T DRY+G +FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STF  
Sbjct: 258 AVMTMLTADRYLGFNFFTNDFGGNAMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+VIT+LSY+VWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAK+FNWL
Sbjct: 318 KRLFGYSSMVYATLVITILSYVVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WT+ FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYELPMMWTVAFMLTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ + INYW+PKAFG+KL  FWGK SFW W+ GF+ AFMPLYILG MGVTRRM  F+
Sbjct: 438 VLFGIFAAINYWWPKAFGFKLNEFWGKVSFWLWIPGFWFAFMPLYILGLMGVTRRMRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ +F +AAFG  LIA+GI + ++Q  VS  KR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQPFFIVAAFGAFLIALGIAAMLVQFAVSIWKREELKDETGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MK+   + P   F+ I MPK T  G +++  SL+ GFA++W
Sbjct: 558 PEYNFAFTPIVHDIDAWDDMKRCGVERPTSGFRPIHMPKGTGAGAILAGLSLVFGFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SF   L   I +TFNYKR+Y+I  E +   E  R R
Sbjct: 618 YIWWLAALSFAGILGYAIAHTFNYKRDYHIPVETVIETEAARDR 661


>gi|103486992|ref|YP_616553.1| cytochrome-c oxidase [Sphingopyxis alaskensis RB2256]
 gi|98977069|gb|ABF53220.1| Cytochrome-c oxidase [Sphingopyxis alaskensis RB2256]
          Length = 672

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/584 (70%), Positives = 488/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMRLQQ ++FG S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 83  MFLRGFADAIMMRLQQVMAFGGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 142

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMTS GA L MISLF+GE+A TGWL YPPLSGIA SP VGV
Sbjct: 143 PLQIGARDVSFPFLNNFSFWMTSAGAALTMISLFVGEYAQTGWLAYPPLSGIAYSPNVGV 202

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN+I TI+K+RAPGM LM MP+FTWT+LC+NILIVA+FP+LT
Sbjct: 203 DYYIWGLQIAGVGTTLSGINLIVTILKLRAPGMGLMKMPVFTWTSLCSNILIVASFPILT 262

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTNDLGG+ MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 263 ATLALLSLDRYAGTNFFTNDLGGSPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 322

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LSYIVWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAK+FNWL
Sbjct: 323 KRLFGYTSMVYATVCITILSYIVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKLFNWL 382

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTI FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 383 FTMYRGRIRYELPMMWTIAFMLTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 442

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG+KL+ FWGK SFW W++GF+VAF PLYILG MGVTRRM  F+
Sbjct: 443 VLFGLFAAINYWWPKAFGFKLDVFWGKVSFWCWVVGFWVAFTPLYILGLMGVTRRMRVFD 502

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IA  G L+IA GI + ++Q  VS  +R  L + +GDPW+GRTLEW+TSSPP
Sbjct: 503 DPSLQIWFAIAGVGALIIAAGIGAMLVQFAVSIWRRKELAEESGDPWDGRTLEWATSSPP 562

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W+ MKK   + P   F+DI MP NT  GI++S   L++GFALVW
Sbjct: 563 PDYNFAFTPVIHDLDAWYDMKKRGGQRPVGGFRDIHMPSNTGAGIILSGLCLVLGFALVW 622

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L  +SF+  +   I +TFNYKR++ I +  +  IE  R R
Sbjct: 623 HIWWLVGLSFVAVIAGAIIHTFNYKRDFDIPAATVAAIEGARTR 666


>gi|399062104|ref|ZP_10746449.1| cytochrome o ubiquinol oxidase, subunit I [Novosphingobium sp.
           AP12]
 gi|398034482|gb|EJL27748.1| cytochrome o ubiquinol oxidase, subunit I [Novosphingobium sp.
           AP12]
          Length = 656

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/584 (68%), Positives = 489/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMR+QQ+++F  + GYL   HY+QIFTAHGVIMIFFVAMP VTG++N+IV
Sbjct: 66  MFLRGFADAVMMRIQQSMAFNGNEGYLNAHHYDQIFTAHGVIMIFFVAMPFVTGLMNYIV 125

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM+SLFIGEFA TGWL YPPLS +A SP VGV
Sbjct: 126 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMMSLFIGEFAQTGWLAYPPLSNLAYSPWVGV 185

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQIAG+GTLLSG+N+IATI+KMRAPGM +M MPIFTWT+LCTNILIVAAFPVLT
Sbjct: 186 DYYIWSLQIAGVGTLLSGVNLIATIVKMRAPGMTMMRMPIFTWTSLCTNILIVAAFPVLT 245

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +V+ + ++DRY+G +FF+ND GG+ MMYVNLIWIWGHPEVYIL+LP+FG+FSEV +TF  
Sbjct: 246 AVMTMLSVDRYLGFNFFSNDFGGSPMMYVNLIWIWGHPEVYILILPLFGVFSEVTATFCG 305

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+VIT+LSY+VWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAK+FNWL
Sbjct: 306 KRLFGYSSMVYATLVITILSYLVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKLFNWL 365

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYR RIR+E+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 366 FTMYRARIRYELPMMWTVAFMLTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 425

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ + INYW+PKAFG+KL  FWGK SFW W+ GF+VAF PLYILGFMGVTRRM  F+
Sbjct: 426 VLFGIFAAINYWWPKAFGFKLNQFWGKVSFWLWVPGFWVAFTPLYILGFMGVTRRMRVFD 485

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S+QIWF IAAFG L+IA GI + ++Q  VS  KR  L D TGDPW+GRTLEW+TSSPP
Sbjct: 486 DPSIQIWFVIAAFGALMIAGGIGAMLVQFAVSIWKREELKDETGDPWHGRTLEWATSSPP 545

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MK+   + P   ++ I MPK T  GI+++  S+ +GFA++W
Sbjct: 546 PEYNFAFTPIVHDIDAWDDMKRCAVERPTSGYRPIHMPKGTGTGIILAGLSIALGFAMIW 605

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SF   +   I++TFNYKR+Y+I  E +   E  R R
Sbjct: 606 YIWWLAAVSFAGIIGYAIFHTFNYKRDYHIPVETVEATEAARTR 649


>gi|383649575|ref|ZP_09959981.1| cytochrome o ubiquinol oxidase subunit I [Sphingomonas elodea ATCC
           31461]
          Length = 666

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 493/585 (84%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ+++FG++ GYL   HY+QIFTAHGVIMIFFVAMP VTG++NF+V
Sbjct: 76  MLLRGFADAIMMRLQQSMAFGANEGYLNAHHYDQIFTAHGVIMIFFVAMPFVTGLMNFVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA LVM SLFIGEFA TGWL   PLSG+  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTAAGAALVMASLFIGEFARTGWLAMAPLSGLDYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N++ATI+KMRAPGM LM MP+FTWTAL TNILIVAAFPVLT
Sbjct: 196 DYYIWALQIAGVGTLLSGVNLVATIVKMRAPGMGLMKMPVFTWTALATNILIVAAFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDRY+GT FFTN  GGN MMYVN+IWIWGHPEVYIL+LP FGIFSEV STFS 
Sbjct: 256 AVLAMLSLDRYVGTQFFTNTGGGNPMMYVNMIWIWGHPEVYILILPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYA +VIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWL
Sbjct: 316 KRLFGYTSMVYAVLVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 376 FTMYKGRIRFELPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL +GINYW+PKAFG+KL+  WG  SFW W++GF+VAF PLY+LG MGVTRR+ HFE
Sbjct: 436 VLFGLFAGINYWWPKAFGFKLDKKWGLVSFWCWVVGFWVAFTPLYVLGLMGVTRRLRHFE 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF +AA G  +IA+GI +F++Q+ VS R R  L D +GDPWN RTLEW+TSSPP
Sbjct: 496 DPSLQIWFVVAAIGAAIIAVGIAAFLLQIFVSIRNREALKDESGDPWNARTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W+ MK    + P   +  I MP NT  GI+++ FSL+ GFA++W
Sbjct: 556 PAYNFAFTPIIHDLDAWYDMKAKKAERPVTGYLPIHMPSNTGAGIILAGFSLVCGFAMIW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L   SF+  +++ I +TFNY R++YI++EE+T  E  R ++
Sbjct: 616 YIWWLAAASFLGLIVMAIAHTFNYDRDFYITAEEVTETENARTQV 660


>gi|359398142|ref|ZP_09191166.1| cytochrome o ubiquinol oxidase subunit I [Novosphingobium
           pentaromativorans US6-1]
 gi|357600560|gb|EHJ62255.1| cytochrome o ubiquinol oxidase subunit I [Novosphingobium
           pentaromativorans US6-1]
          Length = 668

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/584 (69%), Positives = 484/584 (82%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMR+QQ+I+F  + GYL   HY+QIFTAHGVIMIFFVAMP VTG++N+IV
Sbjct: 78  MFLRGFADAVMMRIQQSIAFNGNEGYLNAHHYDQIFTAHGVIMIFFVAMPFVTGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM+SLF+GEFA TGWL YPPLS  A SP VGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMMSLFVGEFAQTGWLAYPPLSNFAYSPWVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GTLLSG+N+IATI+KMRAPGM +M MPIFTWTALCTNILIVAAFPVLT
Sbjct: 198 DYYIWALQIAGVGTLLSGVNLIATIVKMRAPGMTMMRMPIFTWTALCTNILIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +V+ + T DRY+G +FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STF  
Sbjct: 258 AVMTMLTADRYLGFNFFTNDFGGNAMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+VIT+LSY+VWLHHFFTMGS A+VN+FFGITTM+ISIPTGAK+FNWL
Sbjct: 318 KRLFGYSSMVYATLVITILSYVVWLHHFFTMGSRASVNSFFGITTMVISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WT+ FM+TFV+GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRYELPMMWTVAFMLTFVVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ + INYW+PKAFG+KL  FWGK SFW W+ GF+ AFMPLYILG MGVTRRM  F+
Sbjct: 438 VLFGIFAAINYWWPKAFGFKLNEFWGKVSFWLWIPGFWFAFMPLYILGLMGVTRRMRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ +F +AAFG  LIA+GI + ++Q  VS  KR  L D TGDPW+GRTLEWSTSSPP
Sbjct: 498 DPSLQPFFIVAAFGAFLIALGIAAMLVQFAVSIWKREELKDETGDPWDGRTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MK+   + P   F+ I MPK T  G +++  SL+ GFA++W
Sbjct: 558 PEYNFAFTPIVHDIDAWDDMKRCGVERPTSGFRPIHMPKGTGAGAILAGLSLVFGFAMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SF   L   I +TFNYKR+Y+I  E +   E  R R
Sbjct: 618 YIWWLAALSFAGILGYAIAHTFNYKRDYHIPVETVIETEAARDR 661


>gi|393724954|ref|ZP_10344881.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas sp. PAMC
           26605]
          Length = 665

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/587 (67%), Positives = 490/587 (83%), Gaps = 2/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF+DA+MMR QQA+SFGS+ GYLPP+HYNQIFTAHGVIMIFFVAMPLV G++NF+V
Sbjct: 71  MFLRGFSDALMMRAQQAMSFGSNTGYLPPDHYNQIFTAHGVIMIFFVAMPLVVGLMNFVV 130

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FP+LNN SFW+T+ GAI+ MISLF+G +A TGWL  PPLSGI  SP VGV
Sbjct: 131 PLQIGARDVSFPYLNNFSFWLTASGAIITMISLFVGNYARTGWLAMPPLSGIEASPDVGV 190

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GTLLSG+N++ATI+KMRAPGM L  MPIF WTALCTN LIVAAFPVLT
Sbjct: 191 DYYIWGLQIAGLGTLLSGVNLLATIVKMRAPGMTLFKMPIFVWTALCTNTLIVAAFPVLT 250

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR +G  FFTN LGGN MMYVNLIWIWGHPEVYIL+LP FGI+SEVV+TFS 
Sbjct: 251 AVLAILSLDRLLGMQFFTNGLGGNPMMYVNLIWIWGHPEVYILILPAFGIYSEVVATFSQ 310

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+VIT+L+Y+VWLHHFFTMGSGA+VN+FF ITTMIISIPTGAKIFNWL
Sbjct: 311 KRLFGYTSMVYATIVITILAYLVWLHHFFTMGSGASVNSFFAITTMIISIPTGAKIFNWL 370

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIR+E+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 371 FTMYHGRIRYELPMMWTVAFMLTFTIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 430

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG+ +GIN+W+PKAFG+KL+  WGK SFW W++GF+ AF PLY+LG MGVTRR+SHF+
Sbjct: 431 TLFGMFAGINFWWPKAFGFKLDRVWGKRSFWLWVVGFWTAFAPLYVLGLMGVTRRLSHFD 490

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           D + Q +F +AA G L+IA GI    +Q  VS R RH+  L+D+TGDPW+GRTLEWSTSS
Sbjct: 491 DTAYQPYFIVAAIGALMIAGGIACMAMQFFVSIRDRHSTRLLDLTGDPWDGRTLEWSTSS 550

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFAF P+++ +D++W MK   F+ P   F+ I MPKN   G++I + S+  GFA+
Sbjct: 551 PPPDYNFAFTPIVYDNDAFWDMKTRGFERPTTGFKAIHMPKNAAAGVIIGLISVGFGFAM 610

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +W++W L I S +  L + I+++FNYKR+++I  E++   E +R R+
Sbjct: 611 IWYIWWLAIASLVAMLGVSIWHSFNYKRDFHIPVEDVIRTEDERTRV 657


>gi|315122071|ref|YP_004062560.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495473|gb|ADR52072.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 671

 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/581 (68%), Positives = 484/581 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMRLQQAI+ G   GYL   HY+QIFTAHGVIMIFFVAMP+VTG++NF+V
Sbjct: 78  MLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMVTGVMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+L+M SLFIGEFAS GWL YPPLSGI+ SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTAMGAVLMMSSLFIGEFASAGWLAYPPLSGISYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIGT LSGIN++ TIIK+R PGM +M MP+F WT+ C+NI+I+AAFP+LT
Sbjct: 198 DYYIWGLQISGIGTTLSGINLVVTIIKLRCPGMTMMKMPVFVWTSFCSNIMIIAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +  FL TLDRYIGT+FFTN LGGN MMYVNLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATFFLLTLDRYIGTNFFTNHLGGNPMMYVNLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+ IT+LSY VWLHHFFTMGSGANVNAFFGI TMII+IPTGAKIFNWL
Sbjct: 318 KRLFGYSSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM  G++RFEVP++WT+GFM+TF+IGGM GV+LAVP A+F LHNSLFLVAHFHN IIGG
Sbjct: 378 FTMRFGKVRFEVPMMWTLGFMLTFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL++GI YWFPKAFGY+L+PFWGK SFW W +GFY AFMPLY LG  GVTRR+S +E
Sbjct: 438 VVFGLLAGIVYWFPKAFGYRLDPFWGKVSFWCWFMGFYFAFMPLYALGLKGVTRRLSQYE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+SLQ+++ +A  G +LIA GI SFI+  IVS+  R  L D +GDPWNGRTLEWS +SP 
Sbjct: 498 DVSLQVYYVVALLGAVLIAGGIFSFILSFIVSFLNRAQLRDTSGDPWNGRTLEWSIASPA 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P+YNF+F P++H+ D+W  MK+  ++ P + F  I MP+NT  GI+++  S +  FA+VW
Sbjct: 558 PMYNFSFTPVVHKIDAWSDMKEQGYRRPINGFLPIHMPQNTATGIVLAGLSFLFSFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +MW L I+SF+  ++  I++TFNY   Y I ++++   E+ 
Sbjct: 618 YMWWLAILSFVSIVLYTIFHTFNYSHGYEIPAKDVESSEES 658


>gi|170743802|ref|YP_001772457.1| cytochrome o ubiquinol oxidase subunit I [Methylobacterium sp.
           4-46]
 gi|168198076|gb|ACA20023.1| cytochrome o ubiquinol oxidase, subunit I [Methylobacterium sp.
           4-46]
          Length = 667

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/582 (67%), Positives = 482/582 (82%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MM  Q+A+S G+S GYLPP HY+Q+FTAHG+IMIFF+AMP VTGI+N+++
Sbjct: 78  MLLRGFADALMMVTQKALSVGASEGYLPPHHYDQVFTAHGMIMIFFMAMPFVTGIMNYVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGA L M+SLF+GEFA TGWL YPPLSG A SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTAGGAALTMLSLFVGEFARTGWLAYPPLSGAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN+I TI+KMRAPGM +M MP+F WT L +N +IV  FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGINLIVTIVKMRAPGMSMMKMPVFCWTTLASNAIIVTIFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVY+LVLP FGIFSEVVSTF  
Sbjct: 258 ATLALLALDRYVGTHFFTNDFGGNSMLYMNLIWIWGHPEVYVLVLPAFGIFSEVVSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+VI L+S++VWLHHFFTMGSGANVNAFFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATMVIALVSWLVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE P++W IGF+ TFV+GG+ GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYRGRIRFETPMIWVIGFIPTFVLGGLTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL++G+NYW PKAFGYKL+PFWGK SFW WLIGF+  F P+Y LG MGVTRR  HFE
Sbjct: 438 VVFGLLAGVNYWHPKAFGYKLDPFWGKVSFWCWLIGFWTVFAPIYALGLMGVTRRTQHFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D ++Q +  +AA G  +I  GIL+F++Q++VSY +R  L D+TGDPW GRTLEWST+SPP
Sbjct: 498 DPAVQPYLTVAAVGVFIILAGILAFVVQIVVSYLRREQLRDLTGDPWGGRTLEWSTTSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+WW MK+     P   F+ I MP+NT  G++++  S ++GFAL+W
Sbjct: 558 PPYNFAFTPIIHDHDAWWDMKRRGHDRPMQGFRPIHMPRNTAAGVVLAGLSTVLGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           ++W L  +SF+  +   I +TF++ R++YI +E++  +E  R
Sbjct: 618 YIWWLAALSFVALIATAIRHTFDHDRDFYIPAEDVVRLESSR 659


>gi|431805429|ref|YP_007232330.1| Cytochrome O ubiquinol oxidase subunit I [Liberibacter crescens
           BT-1]
 gi|430799404|gb|AGA64075.1| Cytochrome O ubiquinol oxidase subunit I [Liberibacter crescens
           BT-1]
          Length = 665

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 483/585 (82%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQAIS G   GYL P HY+QIFTAHGVIMIFF+AMP+VTG++NF+V
Sbjct: 78  MLLRGFADAIMMRLQQAISSGGGVGYLNPHHYDQIFTAHGVIMIFFMAMPIVTGLMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN  SFWMT  GA++VM+SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 138 PLQIGARDVAFPFLNTFSFWMTVAGAVIVMLSLFVGEFARTGWLAYPPLSGIDYSPDVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+ Q+AGIGT LSGIN++ TIIKMRAPGM +M MP+F WT+ CTNILIVA+FPVLT
Sbjct: 198 DYYIWAFQVAGIGTTLSGINLLVTIIKMRAPGMVMMKMPVFVWTSFCTNILIVASFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTN LGGN MMY+ LIWIWGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 258 ATLALLSLDRYVGTNFFTNHLGGNPMMYIYLIWIWGHPEVYILVLPAFGIFSEVVSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
            RLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGANVNAFFGITTMII+IPTGAKIFNWL
Sbjct: 318 IRLFGYTSMVYATVVITILSYVVWLHHFFTMGSGANVNAFFGITTMIIAIPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFEVP+LWTIGFM+TFVIGGM GV+L+VP A+FLLH SLFL+AHFHN IIGG
Sbjct: 378 FTMYRGRVRFEVPMLWTIGFMVTFVIGGMTGVLLSVPPADFLLHGSLFLIAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG+ +GI YWFPKAFGYKL+PFWGK SFW W IGFY AFMPLY LGF GVTRR+S FE
Sbjct: 438 AVFGVFAGIVYWFPKAFGYKLDPFWGKLSFWSWFIGFYFAFMPLYFLGFKGVTRRLSQFE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQI+F +AAFG  LI +GI+ F++  I+++ KR  L D  GDPWN RTLEWS +SPP
Sbjct: 498 DHSLQIYFIVAAFGAFLIGVGIVCFLMSFIMAFLKRDQLRDENGDPWNARTLEWSIASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++++ D+W  MKK  +  P+  +  I MPKNT  G+++S  S+I  F +VW
Sbjct: 558 PEYNFAFTPIVYEIDAWADMKKRGYNRPESGYLPIHMPKNTGTGVILSGLSVIFAFGMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK-RIR 584
           +MW L +ISFI  + + I++TF+Y     I   EI   E+K R++
Sbjct: 618 YMWWLAVISFIAIIAVSIFHTFDYSHGIEIPVHEIEDKERKLRVK 662


>gi|393773552|ref|ZP_10361949.1| cytochrome-c oxidase [Novosphingobium sp. Rr 2-17]
 gi|392721034|gb|EIZ78502.1| cytochrome-c oxidase [Novosphingobium sp. Rr 2-17]
          Length = 668

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/584 (69%), Positives = 488/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DAVMMRLQQA++F  S GYL   HY+Q+FTAHGVIMIFFVAMP VTG++N++V
Sbjct: 77  MLLRGFSDAVMMRLQQALAFNGSEGYLTAHHYDQVFTAHGVIMIFFVAMPFVTGLMNYVV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+ GA+LVM SLFIGEFA TGWL YPPLS +A SP VGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTTAGAVLVMASLFIGEFAQTGWLAYPPLSELAYSPNVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GT LSGIN+I TIIK+RAPGM LM MPIFTWT+LCTNILIVA+FPVLT
Sbjct: 197 DYYIWSLQVAGVGTTLSGINLIVTIIKLRAPGMGLMKMPIFTWTSLCTNILIVASFPVLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 257 AVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSY+VWLHHFFTMGSGA+VN+FFGITTM+ISIPTGAK+FNWL
Sbjct: 317 KRLFGYTSMVYATCVIMILSYVVWLHHFFTMGSGASVNSFFGITTMVISIPTGAKLFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF++P++WT+ FM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYRGRIRFDLPMMWTVAFMMTFTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ + IN+W+PKAFG+KL  FWGK SFW W++GF+VAFMPLYILG MGVTRRM  F+
Sbjct: 437 VVFGVFAAINFWWPKAFGFKLNEFWGKVSFWCWVVGFWVAFMPLYILGLMGVTRRMRVFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +  LQIWF IA  G  LIA GI + ++Q  VS  KR  L D TG+PW GRTLEWSTSSPP
Sbjct: 497 NPDLQIWFVIAGIGAALIAAGIGAMLVQFAVSIWKREELKDETGNPWGGRTLEWSTSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  M+K   + P D F+DI MP NT  G++++  S +MGFAL+W
Sbjct: 557 PDYNFAFTPVVHDLDAWHDMQKRGAQRPVDGFKDIHMPSNTGAGVILAGISALMGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H++ L  ++FI  +   I +TFNYKR+++I +  +  +E  R R
Sbjct: 617 HIFWLAGLAFIALIGTAIIHTFNYKRDFHIPAATVAAVEDARTR 660


>gi|404253271|ref|ZP_10957239.1| cytochrome O ubiquinol oxidase subunit I [Sphingomonas sp. PAMC
           26621]
          Length = 664

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/582 (65%), Positives = 487/582 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQAI+FG++ GYL   HY+QIFTAHG IMIFFVA+PLV G++NF++
Sbjct: 76  MLLRGFSDALMMRAQQAIAFGANQGYLEAHHYDQIFTAHGTIMIFFVAIPLVVGLVNFVM 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GAILVMISLF+GEFASTGWL Y PL+G+A SP  GV
Sbjct: 136 PLQIGARDVAFPFLNNLSFWLTAAGAILVMISLFVGEFASTGWLSYAPLAGLAYSPETGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQIAG+GT LS INM+AT+IKMRAPGM +M MP+F WTA C+N+L VA FP LT
Sbjct: 196 DYYLWSLQIAGVGTTLSAINMVATVIKMRAPGMTMMKMPVFCWTAFCSNVLAVAIFPALT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +  FL  LDRY+GTHFFTN+LGG+ MMY N++WIWGHPEVY+LVLP FGI+SE+ STF+ 
Sbjct: 256 AAFFLLMLDRYVGTHFFTNELGGSPMMYWNMVWIWGHPEVYVLVLPAFGIYSEITSTFTG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYAT+VIT+LSY+VWLHHFFTMG+G +VN+FFGI TM+I+IPTGAKIFNWL
Sbjct: 316 KRLFGYSSMVYATIVITILSYLVWLHHFFTMGAGPSVNSFFGIATMVIAIPTGAKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG IRFE+P++W + FM+TFV+GGM GV+LA+P A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 376 FTMYRGDIRFELPMMWVVAFMLTFVVGGMTGVLLAIPPADFVLHNSLFLVAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL +G+ YWFPKAFG+KL+ FWGK +FW W+IG++VA+ P+Y++G MG TRR++HF+
Sbjct: 436 VVFGLFAGMVYWFPKAFGFKLDEFWGKVAFWGWVIGYWVAWTPIYVVGLMGTTRRVNHFD 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +LQ +F IAA G L+I +GIL F++ +++ + KR  L D+TGDPW+GRTLEWSTSSPP
Sbjct: 496 DPTLQPYFVIAAIGALIILVGILGFVMSIVMGFVKRDQLRDLTGDPWDGRTLEWSTSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+IH  D+W+ MK   ++ P   ++ I MP+NT  GI+++  +L +GF +VW
Sbjct: 556 PAYNFAFTPMIHDLDAWYDMKSRGYERPAGGYRPIHMPRNTGAGIILAGLALSLGFGMVW 615

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +MW L  +SF   +++ + +TFN KR+Y+I +EE+   E  R
Sbjct: 616 YMWWLAALSFAGLIVVAVAHTFNMKRDYFIPAEEVALTENAR 657


>gi|119387829|ref|YP_918863.1| cytochrome-c oxidase [Paracoccus denitrificans PD1222]
 gi|461328|emb|CAA55033.1| cytochrome ba(3) [Paracoccus denitrificans]
 gi|119378404|gb|ABL73167.1| cytochrome ba3 quinol oxidase subunit 1 apoprotein [Paracoccus
           denitrificans PD1222]
          Length = 668

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/586 (68%), Positives = 480/586 (81%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMRLQQ  +FG S GYL   HY+QIFTAHGVIMIFFVAMP +TG++N++V
Sbjct: 77  MFVRGFADAIMMRLQQVWAFGGSEGYLNSHHYDQIFTAHGVIMIFFVAMPFITGLMNYVV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA++ M SLF+GEFA TGWL +PPLSGI  SP VGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTVGGAVITMASLFLGEFAQTGWLAFPPLSGIGYSPWVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN++ TI+KMRAPGM +M MPIFTWT+ C NILIVA+FPVLT
Sbjct: 197 DYYIWGLQVAGVGTTLSGINLLVTILKMRAPGMTMMRMPIFTWTSFCANILIVASFPVLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GT+FFTNDLGGN MMY+NLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 257 MTLILLTLDRYVGTNFFTNDLGGNPMMYINLIWIWGHPEVYILILPLFGVFSEVTSTFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYATV IT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 317 KRLFGYSSMVYATVCITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYRGRIRYELPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + IN+W+PKAFG+KL+ FWGK SFWFW++GF+ AFMPLYILG MGVTRR+  F+
Sbjct: 437 VLFGLFAAINFWWPKAFGFKLDVFWGKVSFWFWVVGFWAAFMPLYILGLMGVTRRLRVFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRHTLIDITGDPWNGRTLEWSTSS 478
           D  L+IWF IAAFG +LIA GI +  +Q  VS   R R    D++GDPW+GRTLEW+TSS
Sbjct: 497 DPDLRIWFAIAAFGAVLIACGIAAMFVQFGVSILRRDRPEYRDVSGDPWDGRTLEWATSS 556

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFAF P+ H  D+WW MK+     P   +  I MPKNT  G++++  + + G AL
Sbjct: 557 PPPAYNFAFNPISHGLDTWWEMKQQGATRPTGGYMPIHMPKNTGTGVILAALATVCGMAL 616

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VW++W L  +SF+  + + I +TFNY R+YYI   EI   E  R R
Sbjct: 617 VWYVWWLAALSFLGIIAVSIAHTFNYNRDYYIPVSEIEATEDARTR 662


>gi|114707977|ref|ZP_01440869.1| Cytochrome-c oxidase [Fulvimarina pelagi HTCC2506]
 gi|114536606|gb|EAU39738.1| Cytochrome-c oxidase [Fulvimarina pelagi HTCC2506]
          Length = 667

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/585 (68%), Positives = 491/585 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQAI+FG + G+LP  HY+Q+FTAHGVIMIFFVAMP++TGI+N+I+
Sbjct: 78  MLLRGFADAILMRTQQAIAFGGNEGFLPAHHYDQVFTAHGVIMIFFVAMPMITGIMNYII 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGA+L+MISLF+GEFA TGWL +PPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTAGGAMLIMISLFVGEFARTGWLAFPPLSGAEFSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GTLLSG+N++ T+IKMRAPGM +M +P+F W++LCTN+LIVAAFPVLT
Sbjct: 198 DYYIWGLQVAGVGTLLSGVNLLVTVIKMRAPGMTMMRLPVFVWSSLCTNVLIVAAFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L +LDRY GTHFFTND+GGN MMY NLIWIWGHPEVYIL+LP+FG+FSE+ STFS 
Sbjct: 258 AVLTLLSLDRYAGTHFFTNDMGGNSMMYFNLIWIWGHPEVYILILPLFGVFSEITSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLF Y+SMVYA VVIT+LSY+VWLHHFFTMG+GA VN+FFGITTMIISIPTG K+FNWL
Sbjct: 318 KRLFAYTSMVYALVVITILSYLVWLHHFFTMGNGATVNSFFGITTMIISIPTGVKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFE+P++WTI F++TFVIGGM+GV+LAVP  +F +HNSLFLVAHFHNVIIGG
Sbjct: 378 FTMYEGRIRFELPMMWTIAFIVTFVIGGMSGVLLAVPPVDFTVHNSLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  + INYWFPKAFG+KL+ FWGK SFW W++GFY AFMPLY+LG MGVTRR+  F+
Sbjct: 438 VLFGSFAAINYWFPKAFGFKLDVFWGKVSFWCWVVGFYFAFMPLYVLGLMGVTRRLREFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAAFG  LIA GI + ++Q  VS R R  LID TGDPW+GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAFGAALIAAGIAALLLQFYVSVRDRKKLIDATGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++   D++  MK+N+F+ P D F+ I MPKNT  G++++  S + GFAL+W
Sbjct: 558 PQYNFAFTPIVRDLDAFTDMKRNDFRRPGDGFRPIHMPKNTEAGVILAGLSTVCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SF   +   I+++FNY R+Y+I ++E+   E+    L
Sbjct: 618 YIWWLAALSFFGLIGYAIWHSFNYDRDYHIPADEVAETEQAYASL 662


>gi|398384615|ref|ZP_10542644.1| cytochrome o ubiquinol oxidase, subunit I [Sphingobium sp. AP49]
 gi|397722471|gb|EJK83014.1| cytochrome o ubiquinol oxidase, subunit I [Sphingobium sp. AP49]
          Length = 662

 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/585 (68%), Positives = 490/585 (83%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQA++F  S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 74  MFLRGFADAVMMRLQQALAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 133

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM SLF+GEFA TGWL YPPLSGI  SP  GV
Sbjct: 134 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMASLFLGEFAQTGWLAYPPLSGIDYSPATGV 193

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC NILIVA+FP+LT
Sbjct: 194 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSLMKMPVFTWTSLCANILIVASFPILT 253

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRYIGT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 254 ATLVLLSLDRYIGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 313

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 314 KRLFGYTSMVYATCCIMVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 373

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+IRFE+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 374 FTMYRGKIRFELPMMWTVAFMLTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 433

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG+KL  FWGK SFW W +GF++AF PLYI+G MGVTRRM  F+
Sbjct: 434 VLFGLFAAINYWWPKAFGFKLNVFWGKVSFWCWQVGFWLAFTPLYIMGLMGVTRRMRVFD 493

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQI+F IAA G  ++A GI + ++Q  VS  KR  L  + GDPW+GRTLEW+TSSPP
Sbjct: 494 DPSLQIYFVIAAIGAAIVAAGIGAMLVQFAVSIWKRDEL-KVEGDPWDGRTLEWATSSPP 552

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+++ +D+W  MK+NN++ P   +Q I MP +T  G++++  + + GFAL+W
Sbjct: 553 PEYNFAFTPVVYDTDTWADMKRNNYQRPLTGYQAIHMPSSTGAGVILAGLATLCGFALIW 612

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L  +SF+  L++ I +TFNYKR++YI  + +T  E++R R+
Sbjct: 613 YMWWLAGLSFLGLLVVAIAHTFNYKRDFYIPQDVVTRTEEERTRI 657


>gi|381202011|ref|ZP_09909130.1| cytochrome o ubiquinol oxidase subunit I [Sphingobium yanoikuyae
           XLDN2-5]
 gi|427408142|ref|ZP_18898344.1| cytochrome o ubiquinol oxidase, subunit I [Sphingobium yanoikuyae
           ATCC 51230]
 gi|425713481|gb|EKU76494.1| cytochrome o ubiquinol oxidase, subunit I [Sphingobium yanoikuyae
           ATCC 51230]
          Length = 666

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/585 (68%), Positives = 488/585 (83%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DAVMMRLQQA++F  S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 78  MFLRGFADAVMMRLQQALAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM SLF+GEFA TGWL YPPLSGI  SP  GV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMASLFLGEFAQTGWLAYPPLSGIDYSPATGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC NILIVA+FP+LT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSLMKMPVFTWTSLCANILIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 258 ATLVLLSLDRYAGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATCCIMVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+IRFE+P++WT+ FM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGKIRFELPMMWTVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG+KL  FWGK SFW W +GF++AF PLYI+G MGVTRRM  F+
Sbjct: 438 VLFGLFAAINYWWPKAFGFKLNVFWGKVSFWCWQVGFWLAFTPLYIMGLMGVTRRMRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQI+F IAA G  ++A GI + ++Q  +S  KR  L  + GDPW+GRTLEW+TSSPP
Sbjct: 498 DPSLQIYFVIAAIGAAIVAAGIGAMLLQFAISIWKRDEL-KVEGDPWDGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+++ +DSW  MKKN ++ P   +Q I MP +T  G++++  S + GFAL+W
Sbjct: 557 PEYNFAFTPVVYDADSWADMKKNGYQRPLTGYQAIHMPSSTGAGVILAALSTLCGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SFI  + + I +TFNYKR++YI  E++T  E++R R+
Sbjct: 617 YIWWLAGLSFIGIVAVAIGHTFNYKRDFYIPVEDVTRTEEERTRI 661


>gi|340028450|ref|ZP_08664513.1| cytochrome-c oxidase [Paracoccus sp. TRP]
          Length = 668

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/586 (68%), Positives = 481/586 (82%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMRLQQ  +FG S GYL   HY+QIFTAHGVIMIFFVAMP VTG++N+IV
Sbjct: 77  MFLRGFADAIMMRLQQVWAFGGSEGYLNSHHYDQIFTAHGVIMIFFVAMPFVTGLMNYIV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGAI+ M SLF+GEFA TGWL +PPLSGI  SP VGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTVGGAIITMASLFVGEFAQTGWLAFPPLSGIGYSPWVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN++ TI+KMRAPGM +M MP+FTWTA CTNILIVA+FPVLT
Sbjct: 197 DYYIWGLQVAGVGTTLSGINLLVTILKMRAPGMTMMRMPVFTWTAFCTNILIVASFPVLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GT+FFTNDLGGN MMY+NLIWIWGHPEVYIL+LP+FG+FSE+ +TFS 
Sbjct: 257 MTLILLTLDRYVGTNFFTNDLGGNPMMYINLIWIWGHPEVYILILPLFGVFSEITATFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYA+V IT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 317 KRLFGYSSMVYASVCITVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 377 FTIYRGRVRFELPMMWTLAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  + +NYW+PKAFG+KL+ FWGK SFWFW+IGF+ AFMPLYILG MGVTRR+  F+
Sbjct: 437 VLFGCFAAVNYWWPKAFGFKLDVFWGKVSFWFWVIGFWFAFMPLYILGLMGVTRRLRVFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRK--RHTLIDITGDPWNGRTLEWSTSS 478
           D  L+IWF IAA G +LIA+GIL+  +QL VS  +  R    D TGDPW+GRTLEW+TSS
Sbjct: 497 DPDLRIWFAIAALGAVLIAVGILAMFVQLGVSIMRCNRPGYRDPTGDPWDGRTLEWATSS 556

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFAF P+ H  D+WW MK+     P   F  I MPK+T  G++++  + + G A+
Sbjct: 557 PPPAYNFAFNPISHGLDTWWEMKQQGATRPTSGFMPIHMPKSTGTGVILAALATVCGLAM 616

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VW++W L  +SF+  + + I +TFNY R+YYI   EI   E  R R
Sbjct: 617 VWYIWWLAGLSFLGIIAVSIAHTFNYDRDYYIPVPEIEATEDARTR 662


>gi|334344745|ref|YP_004553297.1| cytochrome o ubiquinol oxidase subunit I [Sphingobium
           chlorophenolicum L-1]
 gi|334101367|gb|AEG48791.1| cytochrome o ubiquinol oxidase, subunit I [Sphingobium
           chlorophenolicum L-1]
          Length = 666

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/585 (68%), Positives = 489/585 (83%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF+DA+MMR+QQA +F  S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 78  MFLRGFSDAIMMRIQQAWAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM SLF+GEFA TGWL YPPLSGIA SP  GV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMFSLFLGEFAQTGWLAYPPLSGIAYSPATGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC N+LIVA+FP+LT
Sbjct: 198 DYYIWSLQVAGVGTTLSGINLIATIVKMRAPGMSLMKMPVFTWTSLCANVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEV STFS 
Sbjct: 258 ATLVLLSLDRYAGTAFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVTSTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATCTIMVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGRIRFELPMMWTVAFMLTFTIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG++L  FWG  SFW W IGF++AF PLY+LG MGVTRRM  F+
Sbjct: 438 VLFGLFAAINYWWPKAFGFRLNQFWGHVSFWCWNIGFWLAFGPLYVLGLMGVTRRMRVFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA+GI + ++Q  VS  KR  L  + GDPW+GRTLEW+TSSPP
Sbjct: 498 DPSLQIWFVIAAIGAAIIAVGIGAMLVQFAVSIWKRDEL-KVEGDPWDGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+++ +D+W  MKKNN++ P   +Q I MP +T  G++++  + + GFAL+W
Sbjct: 557 PEYNFAFTPVVYDTDTWADMKKNNYQRPLSGYQAIHMPSSTGAGVILAALATLCGFALIW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           ++W L  +SFI  + + I ++FNYKR++YI ++ +T  E++R R+
Sbjct: 617 YIWWLAGLSFIGLVAVAIGHSFNYKRDFYIPADVVTRTEEERTRI 661


>gi|254780473|ref|YP_003064886.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040150|gb|ACT56946.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 671

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/585 (67%), Positives = 480/585 (82%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMRLQQAI+ G   GYL   HY+QIFTAHGVIMIFFVAMP++TGI+NF+V
Sbjct: 78  MLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT  GA+++M SLFIGEFAS GWL YPPLSGI+ SPGVGV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAGIGT LSGIN++ TIIKMR PGM +M MP+F WTA C+NI+I+AAFP+LT
Sbjct: 198 DYYIWGLQIAGIGTTLSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LFL TLDRYIGT+FFTN LGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 258 ATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+ IT+LSY VWLHHFFTMGSGANVNAFFGI TM+I++PTGAKIFNWL
Sbjct: 318 KRLFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM  G++RFEVP++WT+GFMITF+IGGM GV+LAVP A+F LHNSLFLVAHFHN IIGG
Sbjct: 378 FTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL +GI YWFPKAFGY+L  FWGK SFW W +GFY+AFMPLY LG  GVTRR+S +E
Sbjct: 438 VVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYE 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +LQ+++ +A  G +LI +G+ SF++  IVS+  R  L D  GDPW+GRTLEWS SSP 
Sbjct: 498 DTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWDGRTLEWSISSPS 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++   D+W +MK   +++P + F  I MP NT  GI+++  S++  FA+VW
Sbjct: 558 PQYNFAFTPIVSTIDAWEHMKNRGYRYPSEGFMPIHMPSNTATGIILAALSIVFSFAMVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +MW L ++SFI  +   I++TFNY   Y +S++++   E+   ++
Sbjct: 618 YMWWLALLSFISIVFYTIFHTFNYNDGYEVSAKDVAFSEEVHRKM 662


>gi|390167311|ref|ZP_10219302.1| cytochrome o ubiquinol oxidase subunit I [Sphingobium indicum B90A]
 gi|389590013|gb|EIM68018.1| cytochrome o ubiquinol oxidase subunit I [Sphingobium indicum B90A]
          Length = 668

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/584 (67%), Positives = 485/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR+QQA +F  S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 78  MFLRGFADAIMMRIQQAWAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM+SLF+GEFA TGWL YPPLSGIA SP  GV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMMSLFLGEFAQTGWLAYPPLSGIAYSPATGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC N+LIVA+FP+LT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSLMKMPVFTWTSLCANVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTF  
Sbjct: 258 ATLVLLSLDRYAGTAFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATCTIMVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+IRFE+P++W + FM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGKIRFELPMMWAVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG++L+ FWGK SFW W IGF++AF PLY+LG MGVTRR+   +
Sbjct: 438 VLFGLFAAINYWWPKAFGFRLDVFWGKVSFWCWNIGFWLAFGPLYVLGLMGVTRRLRVLD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ WF +AA G  +IA+GI + +IQ  +S  KR  L D TGDPW+GRTLEW+TSSPP
Sbjct: 498 DPSLQPWFVVAAIGAAVIALGIGAMLIQFALSIWKRDELRDPTGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+++  D+W  MKKN ++ P   +Q I MP +T  G++++  + + GFAL+W
Sbjct: 558 PDYNFAFTPVVYDGDTWADMKKNGYQRPLSGYQPIHMPSSTGAGVILAGLATLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SFI  + + I ++FNYKR+++I ++ +T  E+ R R
Sbjct: 618 YIWWLAGLSFIGIVAVAIGHSFNYKRDFHIPADVVTRTEEDRTR 661


>gi|294012085|ref|YP_003545545.1| cytochrome o ubiquinol oxidase subunit I [Sphingobium japonicum
           UT26S]
 gi|292675415|dbj|BAI96933.1| cytochrome o ubiquinol oxidase subunit I [Sphingobium japonicum
           UT26S]
          Length = 668

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/584 (67%), Positives = 484/584 (82%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR+QQA +F  S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 78  MFLRGFADAIMMRIQQAWAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM+SLF+GEFA TGWL YPPLSGIA SP  GV
Sbjct: 138 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMMSLFLGEFAQTGWLAYPPLSGIAYSPATGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC N+LIVA+FP+LT
Sbjct: 198 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSLMKMPVFTWTSLCANVLIVASFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY GT FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTF  
Sbjct: 258 ATLVLLSLDRYAGTAFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFCG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATCTIMVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+IRFE+P++W + FM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYRGKIRFELPMMWAVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG++L  FWGK SFW W IGF++AF PLY+LG MGVTRR+   +
Sbjct: 438 VLFGLFAAINYWWPKAFGFRLNVFWGKVSFWCWNIGFWLAFGPLYVLGLMGVTRRLRVLD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ WF +AA G  +IA+GI + +IQ  +S  KR  L D TGDPW+GRTLEW+TSSPP
Sbjct: 498 DPSLQPWFVVAAIGAAVIALGIGAMLIQFALSIWKRDELRDPTGDPWDGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P+++  D+W  MKKN ++ P   +Q I MP +T  G++++  + + GFAL+W
Sbjct: 558 PDYNFAFTPVVYDGDTWADMKKNGYQRPLSGYQPIHMPSSTGAGVILAGLATLCGFALIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  +SFI  + + I ++FNYKR+++I ++ +T  E+ R R
Sbjct: 618 YIWWLAGLSFIGIVAVAIGHSFNYKRDFHIPADVVTRTEEDRTR 661


>gi|408377256|ref|ZP_11174859.1| cytochrome-c oxidase [Agrobacterium albertimagni AOL15]
 gi|407749215|gb|EKF60728.1| cytochrome-c oxidase [Agrobacterium albertimagni AOL15]
          Length = 667

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/584 (69%), Positives = 486/584 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ ++F  S GYL   HY+QIFTAHGVIMIFFVAMP VTG++N++V
Sbjct: 77  MLVRGFADAIMMRLQQVLAFNGSEGYLNAHHYDQIFTAHGVIMIFFVAMPFVTGLMNYVV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLF+GEFA TGWL +PPLSGI  SP VGV
Sbjct: 137 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFVGEFAQTGWLAFPPLSGIGYSPWVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQIAG+GT LSGIN++ TI+KMRAPGM LM MPIFTWTALCTN+LIVA+FPVLT
Sbjct: 197 DYYIWGLQIAGVGTTLSGINLLVTIVKMRAPGMTLMRMPIFTWTALCTNVLIVASFPVLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GT+FFTNDLGGN MMY+NLIWIWGHPEVYIL+LP+FG+FSE+ STFS 
Sbjct: 257 MTLILLTLDRYVGTNFFTNDLGGNPMMYINLIWIWGHPEVYILILPLFGVFSEITSTFSG 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMVYATV IT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIIS+PTGAKIFNWL
Sbjct: 317 KRLFGYSSMVYATVCITILSYIVWLHHFFTMGSGASVNAFFGITTMIISVPTGAKIFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RFE+P++WT+ FM+TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 377 FTMYKGRVRFELPMMWTVAFMLTFTIGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  + I YW+PKAFG++L  FWGK SFW W+ GF++AFMPLY+LG MGVTRRM  F+
Sbjct: 437 VLFGCFAAIAYWWPKAFGFQLNVFWGKVSFWSWVSGFWLAFMPLYVLGLMGVTRRMRVFD 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D  L+IWF +AA G LLIA+GI +F IQ+ VS   R   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 497 DPDLRIWFILAALGALLIAVGIAAFFIQIAVSIWNRKDNMDVTGDPWDGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+W  MK+   K PK  +  I MP+ T  G++IS  + + GFALVW
Sbjct: 557 PAYNFAFTPVVHDLDAWHDMKQVGQKRPKALYLPIHMPRYTGTGVIISGLATVCGFALVW 616

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++W L  ++F+  + + I +TFNY R+YY+  +E+  +EK R R
Sbjct: 617 YIWWLAALAFLAIIAVSIAHTFNYDRDYYVPVDEVERVEKARDR 660


>gi|389694201|ref|ZP_10182295.1| cytochrome o ubiquinol oxidase, subunit I [Microvirga sp. WSM3557]
 gi|388587587|gb|EIM27880.1| cytochrome o ubiquinol oxidase, subunit I [Microvirga sp. WSM3557]
          Length = 667

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/583 (65%), Positives = 476/583 (81%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MM  Q+A+S G + GYLPP HY+Q+F+AHG+IMIFF+AMP VTG++N+++
Sbjct: 78  MLLRGFADALMMITQKALSVGVNEGYLPPHHYDQVFSAHGMIMIFFMAMPFVTGLMNYVM 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+GGAIL M+SLF+GEF+   WLG+ PLS  A SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNNFSFWMTAGGAILTMMSLFVGEFSRATWLGFAPLSEAAYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSG+N+IATI KMRAPGM +M MP+F WT L +N +IV  FPVLT
Sbjct: 198 DYYIWGLQVAGVGTTLSGVNLIATIAKMRAPGMTMMKMPVFCWTTLASNAMIVTIFPVLT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+GTHFFTND GGN MMY+NLIWIWGHPEVY+LVLP FGIFSEV STFSS
Sbjct: 258 ATLTLLALDRYVGTHFFTNDYGGNPMMYMNLIWIWGHPEVYVLVLPAFGIFSEVTSTFSS 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT+VI L+S++VWLHHFFTMG+G NVN+FF I +MIISIPTGAK+FNWL
Sbjct: 318 KRLFGYTSMVYATMVIALVSWLVWLHHFFTMGAGPNVNSFFAIASMIISIPTGAKVFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG++RFE P +W +GF+ TFVIGG+ GV+LAVP A+F LHN+LFLVAHFHNVIIGG
Sbjct: 378 FTMYRGKLRFETPFIWVVGFIPTFVIGGLTGVLLAVPPADFQLHNTLFLVAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++G+ YWFPKAFG+KL+PFWGK SFW WL+GF+  F PLY++G MGVTRR  HF+
Sbjct: 438 VVFGVLAGLQYWFPKAFGFKLDPFWGKVSFWCWLVGFWTVFAPLYLVGLMGVTRRTQHFD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D ++Q +  +AA G  +I  GI + +IQL VSY +R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 498 DPAVQPYLTVAAIGVFIIMAGIAALLIQLFVSYLRREQLRDLTGDPWEGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H  D+WW MK+     P + F+ I MPKNT  G++++  S ++GFALVW
Sbjct: 558 PPYNFAFTPVVHDLDAWWDMKRRGADHPLEGFRPIHMPKNTGAGVVLAGLSTVLGFALVW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           ++W L  +SF+  L   I +TFNY R+YYI +EE+  +E +R+
Sbjct: 618 YIWWLAALSFVALLAAAIIHTFNYNRDYYIPAEEVVRLENQRM 660


>gi|94498639|ref|ZP_01305192.1| cytochrome o ubiquinol oxidase subunit I [Sphingomonas sp. SKA58]
 gi|94421934|gb|EAT06982.1| cytochrome o ubiquinol oxidase subunit I [Sphingomonas sp. SKA58]
          Length = 657

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/570 (69%), Positives = 476/570 (83%), Gaps = 1/570 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMRLQQA +F  S GYL   HY+Q+FTAHGVIMIFFVAMP +TG++N+IV
Sbjct: 69  MFLRGFADAIMMRLQQAWAFNGSEGYLNAHHYDQVFTAHGVIMIFFVAMPFITGLMNYIV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT+GGA+LVM SLF+GEFA TGWL YPPLSGI  SP  GV
Sbjct: 129 PLQIGARDVSFPFLNNFSFWMTTGGAVLVMCSLFLGEFAQTGWLAYPPLSGIDYSPATGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ+AG+GT LSGIN+IATI+KMRAPGM LM MP+FTWT+LC N+LIVA+FP+LT
Sbjct: 189 DYYIWALQVAGVGTTLSGINLIATIVKMRAPGMSLMKMPVFTWTSLCANVLIVASFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+GT+FFTND GGN MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTF S
Sbjct: 249 ATLVLLSLDRYVGTNFFTNDFGGNPMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFCS 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 309 KRLFGYTSMVYATCTIMVLSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKLFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRFE+P++W + FM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYRGRIRFELPMMWAVAFMLTFTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL + INYW+PKAFG++L  FWGK SFW W IGF++AF PLY+LG MGVTRRM  F+
Sbjct: 429 VLFGLFAAINYWWPKAFGFRLNQFWGKVSFWCWNIGFWLAFGPLYVLGLMGVTRRMRVFD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQIWF IAA G  +IA GI + +IQ   S  KR  L  + GDPW+GRTLEW+TSSPP
Sbjct: 489 DPSLQIWFVIAAIGAAIIAAGIGAMLIQFAWSIWKRKEL-AVEGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H +DSW  MKK+ ++ P   F+ I MP +T  G++++  S + GFAL+W
Sbjct: 548 PEYNFAFTPVVHDADSWADMKKHGYQRPVTGFKAIHMPSSTGTGVILAALSTLCGFALIW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYI 570
           ++W L  + FI  + + I +TFNYKR++YI
Sbjct: 608 YIWWLAGLGFIGIVAVAIAHTFNYKRDFYI 637


>gi|145299870|ref|YP_001142711.1| cytochrome o ubiquinol oxidase subunit I [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|418358094|ref|ZP_12960778.1| cytochrome o ubiquinol oxidase subunit I [Aeromonas salmonicida
           subsp. salmonicida 01-B526]
 gi|142852642|gb|ABO90963.1| cytochrome o ubiquinol oxidase subunit I [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|356688707|gb|EHI53261.1| cytochrome o ubiquinol oxidase subunit I [Aeromonas salmonicida
           subsp. salmonicida 01-B526]
          Length = 658

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/583 (66%), Positives = 471/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLLRGFADAVMMRTQQVMASAGGDGILPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNN+SFW T+   +L+ +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNISFWFTAAAVVLINVSLAVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATIIKMRAPGM +M +P+FTWTALC NILI+A+FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIIKMRAPGMTMMRLPVFTWTALCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEVV+TF  
Sbjct: 248 VTVALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGF+ITF IGGM GV+L+VPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFTSPMLWTIGFIITFTIGGMTGVLLSVPAANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L+  WGK SFWFW++GF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLDETWGKRSFWFWIVGFFVAFMPLYVLGFMGMTRRVSQQL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +   W  +AA G  LIA+G+L  +IQ++VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPAFHPWLVVAAVGAGLIAIGVLCQVIQVVVSIRDREKNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D++W  K+N   + + K +  I MPKNT  G++I+ FS + GFA++
Sbjct: 548 PFYNFAIEPTITGLDAFWEAKQNGTAYQQPKQYAPIHMPKNTGAGVIIAGFSALFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I +F+  +   I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWMAIAAFVAMIATWIIHSFNDDVDYYVQVDEIERIEGQH 650


>gi|411008607|ref|ZP_11384936.1| ubiquinol oxidase subunit I [Aeromonas aquariorum AAK1]
 gi|423197471|ref|ZP_17184054.1| ubiquinol oxidase subunit 1 [Aeromonas hydrophila SSU]
 gi|404631159|gb|EKB27795.1| ubiquinol oxidase subunit 1 [Aeromonas hydrophila SSU]
          Length = 658

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/585 (65%), Positives = 469/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLLRGFADAVMMRTQQVMASAGGEGILPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+   +L+ +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAAAVVLINVSLGVGEFAQTGWLAYPPLSGLEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATIIKMRAPGM +M +P+FTWTALC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIIKMRAPGMTMMRLPVFTWTALCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEVV+TF  
Sbjct: 248 VTIALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF+ITF +GGM GV+L+VPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFTSPMLWTVGFIITFTVGGMTGVLLSVPAANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+  WGK +FW W+ GF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFKLDDVWGKRAFWCWITGFFVAFMPLYVLGFMGMTRRVSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D     W  +AA G  LIA+G+L  +IQ++VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPEFHGWLVVAACGAGLIALGVLCQVIQIVVSIRDREKNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQD-ILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D++W  K++   + + K  D I MPKN+  G++I+ FS + GFA++
Sbjct: 548 PFYNFAIEPKIKGLDAFWEAKQDGSAYQQPKHYDPIHMPKNSGAGVIIAAFSTLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W + I  F+  +   I ++FN   +YY+  +EI  IE++   
Sbjct: 608 WHIWWMAIAGFVGMIATWIIHSFNDDVDYYVQVDEIERIERQHFE 652


>gi|347739078|ref|ZP_08870425.1| putative transmembrane cytochrome O ubiquinol oxidase (subunit I)
           oxidoreductase protein [Azospirillum amazonense Y2]
 gi|346917717|gb|EGX99982.1| putative transmembrane cytochrome O ubiquinol oxidase (subunit I)
           oxidoreductase protein [Azospirillum amazonense Y2]
          Length = 659

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/586 (65%), Positives = 475/586 (81%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQA++   + G LPPEH++QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFADAVMMRTQQAMASTGAAGPLPPEHFDQIFTAHGVIMIFFMAMPFMVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+T+ GA+L+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLTAAGALLINISLAVGEFARTGWLAYPPLSELQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+NMI TI+KMRAPGM LM MPIFTWT LC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALQISGVGTLLAGVNMITTILKMRAPGMTLMRMPIFTWTTLCSNMLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+G HFFTND GGN MMYVNLIW WGHPEVYILVLP FGIFSEV+STFSS
Sbjct: 248 ATLAMLSLDRYLGMHFFTNDGGGNAMMYVNLIWAWGHPEVYILVLPAFGIFSEVISTFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATV IT+LS+IVWLHHFFTMG+GANVNAFFGI+TMIISIPTGAKIFNWL
Sbjct: 308 KKLFGYTSMVYATVCITVLSFIVWLHHFFTMGAGANVNAFFGISTMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++F VP+LWT+GFM+TFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQFTVPVLWTLGFMVTFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G  YWFPKAFG+KL    GK SFW WL+GFY+AFMPLY LG MG+TRRM+H +
Sbjct: 428 VLFGYLAGFTYWFPKAFGFKLNETLGKVSFWCWLVGFYLAFMPLYALGLMGMTRRMNHVD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           ++    +  +AA G  +IA GI +F++Q++VS   R  L D+TGDPWNGRTLEW+TSSPP
Sbjct: 488 NVVWHNYLLVAALGAAVIACGIGAFVLQILVSVLNRKALRDLTGDPWNGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK--FPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
             YNFA  P++   D++W  K+       P   +  I MP NT  G+++  F  ++GFAL
Sbjct: 548 AFYNFAVDPVVTSRDAFWEQKQTTGAGLQPLPTYGKIHMPHNTGTGVILGGFIAVLGFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L + +F   + + I +TFN  R+YY+ SE +   E K  +
Sbjct: 608 IWHIWWLAVAAFAAAVAVGIGHTFNENRDYYVPSETVAETEGKYFK 653


>gi|423207393|ref|ZP_17193949.1| ubiquinol oxidase subunit 1 [Aeromonas veronii AMC34]
 gi|404620460|gb|EKB17357.1| ubiquinol oxidase subunit 1 [Aeromonas veronii AMC34]
          Length = 658

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/583 (65%), Positives = 471/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MMLRGFADAVMMRTQQVMASAGGDGILPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN+SFW T+   +L+ +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNISFWFTAAAVVLINVSLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATIIKMRAPGM +M +P+FTWTALC+N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIIKMRAPGMTMMRLPVFTWTALCSNVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEVV+TFS 
Sbjct: 248 VTIALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF+ITF IGGM GV+L+VPAANF+LHNSLFL+AHFHNVIIG 
Sbjct: 368 FTMYRGRIEFTSPMLWTVGFIITFTIGGMTGVLLSVPAANFVLHNSLFLIAHFHNVIIGA 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FW W+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWCWIIGFFVAFMPLYVLGFMGMTRRISQQL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +   W  +AA G  LIA+G+L  +IQL+VS R R    D++GDPW GRTLEW+TSSPP
Sbjct: 488 DPAFHPWLVVAACGAGLIALGVLCQVIQLVVSIRDREQNRDVSGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D++W  K+N   + + K +  I MPKNT  G++I+ FS I GFA++
Sbjct: 548 PFYNFAIEPKITGLDAFWEAKQNGSAYQQPKQYAPIHMPKNTGAGVIIAGFSAIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I++F   +   I ++FN   +YY+  +EIT IE + 
Sbjct: 608 WHIWWMAILAFAAMIGSWIIHSFNDDVDYYVQVDEITRIEDQH 650


>gi|99082125|ref|YP_614279.1| cytochrome-c oxidase [Ruegeria sp. TM1040]
 gi|99038405|gb|ABF65017.1| Cytochrome-c oxidase [Ruegeria sp. TM1040]
          Length = 678

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/582 (66%), Positives = 479/582 (82%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAV+MRL QA++     G+LP  HY+Q+FTAHGVIMIFFVAMP +TG +N+++
Sbjct: 90  MLVRGFADAVLMRLHQALASAGYVGFLPAYHYDQVFTAHGVIMIFFVAMPFITGFMNYVM 149

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFW+T  GA+L+MISLF+GEFA+TGWL Y PLSG+  SPGVG+
Sbjct: 150 PLQIGARDVAFPFLNNFSFWLTVSGAVLIMISLFVGEFAATGWLAYAPLSGLKFSPGVGM 209

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSL IAGIGT LSGIN++ T++KMRAPGM  M +PIF+WT LCTNILIV  FPVLT
Sbjct: 210 DYYLWSLNIAGIGTTLSGINLVVTLVKMRAPGMTWMKLPIFSWTTLCTNILIVVTFPVLT 269

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+GTHFFTN++GGN MMYVNLIWIWGHPEVYIL+LP+FGIFSE+V+TF  
Sbjct: 270 ATLALLTADRYLGTHFFTNEMGGNPMMYVNLIWIWGHPEVYILILPIFGIFSEIVATFCG 329

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT VI +LSYIVWLHHFFTMG+GA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 330 KRLFGYASMVYATCVIMVLSYIVWLHHFFTMGAGADVNSFFGITTMIISIPTGAKLFNWL 389

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRFE+P++WTI FM+TFV+GGM GV+LAVP A+++LHNSLFL+AHFHNVIIGG
Sbjct: 390 FTMYKGRIRFELPMMWTIAFMLTFVVGGMTGVLLAVPPADYVLHNSLFLIAHFHNVIIGG 449

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PKAFG+ L+PFWGK SFW W+ GF+VAFMPLY+LG MGVTRR+S FE
Sbjct: 450 VVFGIFAGITYWWPKAFGFHLDPFWGKVSFWGWVGGFWVAFMPLYLLGLMGVTRRLSQFE 509

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D     +F  A  G L+IA+G+L+F++Q+ VS R R  L  +  DPW GRTLEWST+SPP
Sbjct: 510 DTIYAGYFFTALIGALMIAVGLLAFLVQIFVSIRNREKL-AVGNDPWGGRTLEWSTTSPP 568

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P +++ D+W +MK ++ K P   F  I MP  T  GI+++    +MGFALVW
Sbjct: 569 PYYNFAFTPRVYERDAWHHMKTHDAKAPTSGFVPIHMPHYTASGIILAGLMTVMGFALVW 628

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           H+W L+ + F+ +L   I +TFNY R+YY+ +EE++ IE  +
Sbjct: 629 HIWWLSALMFLASLAYGIAHTFNYNRDYYVPAEEVSEIETGQ 670


>gi|117619135|ref|YP_857449.1| ubiquinol oxidase subunit I [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560542|gb|ABK37490.1| ubiquinol oxidase polypeptide I [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 658

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/585 (65%), Positives = 470/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++   S GYL   HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLLRGFADAVMMRGQQVMASAGSEGYLNAHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+   +L+ +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAAAVVLINVSLGVGEFAQTGWLAYPPLSGLEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATIIKMRAPGM +M +P+FTWTALC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIIKMRAPGMTMMRLPVFTWTALCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEVV+TF  
Sbjct: 248 VTIALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF+ITF +GGM GV+L+VPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFTSPMLWTVGFIITFTVGGMTGVLLSVPAANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+  WGK +FW W+ GF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFKLDDTWGKRAFWCWITGFFVAFMPLYVLGFMGMTRRVSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D     W  +AA G  LIA+G+L  +IQ++VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPEFHGWLVVAACGAGLIALGVLCQVIQIVVSIRDREKNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQD-ILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D++W  K++   + + K  D I MPKN+  G++I+ FS++ GFA++
Sbjct: 548 PFYNFAIEPKIKGLDAFWEAKQDGSAYQQPKHYDPIHMPKNSGAGVIIAAFSVVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W + I  F+  +   I ++FN   +YY+  +EI  IE++   
Sbjct: 608 WHIWWMAIAGFVGMIATWIIHSFNDDVDYYVQVDEIERIERQHFE 652


>gi|419923197|ref|ZP_14441159.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 541-15]
 gi|388394249|gb|EIL55552.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 541-15]
          Length = 663

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   LI  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMLITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|312964547|ref|ZP_07778803.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           2362-75]
 gi|312290781|gb|EFR18658.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           2362-75]
          Length = 663

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E K 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENKH 650


>gi|113867092|ref|YP_725581.1| bo3-type quinol oxidase, subunit I [Ralstonia eutropha H16]
 gi|113525868|emb|CAJ92213.1| bo3-type quinol oxidase, subunit I [Ralstonia eutropha H16]
          Length = 658

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/584 (65%), Positives = 466/584 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++   + G LPPEHY+QIFTAHGVIMIFFVAMPL+TG++N +V
Sbjct: 69  MLLRGFADAVMMRTQLALATNGATGVLPPEHYDQIFTAHGVIMIFFVAMPLMTGLMNLVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 129 PLQIGARDVAFPFLNTLSFWLFVSGAMLVNVSLGVGEFAKTGWLAYPPLSGLDFSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N + TI++MRAPGM LM MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 189 DYYLWSLQISGLGTLLTGVNFLVTILRMRAPGMTLMRMPVFTWTALCTNVLIVAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 249 VTLALLGLDRYVGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVIATFSG 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 309 KKLFGYKGMVYATAAIMVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++   P+LWT+GFMITFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYRGRVQMTSPVLWTLGFMITFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++GI YW+PKAFG+ L    GKC+FW WL+GFY AFMPLY+LG MG+TRR++H +
Sbjct: 429 VLFGYLAGITYWWPKAFGFTLNERLGKCAFWCWLVGFYFAFMPLYVLGLMGMTRRLNHTD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G + +A+GI   ++Q++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 489 NPAWTPWLYLAVVGVVFVALGIFFQVLQIVVSIRDRKKLADVTGDPWGGRTLEWATSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P++   D++  MK      P + ++ I MPKNT  G +I  FSL+ GFAL W
Sbjct: 549 PFYNFAHTPVVRDLDAFSDMKARGETLPTEGYEKIHMPKNTGAGFIIGAFSLVFGFALTW 608

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W + I+  +  +   I+ + +   +YY+ + E+  IE + ++
Sbjct: 609 HIWWMAIVGLVGMVWAFIHRSNDDHIDYYVPATEVEQIETRHLQ 652


>gi|300947918|ref|ZP_07162066.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           116-1]
 gi|300452518|gb|EFK16138.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           116-1]
          Length = 663

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEVGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|414574643|ref|ZP_11431852.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 3233-85]
 gi|415836275|ref|ZP_11518687.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           RN587/1]
 gi|417611463|ref|ZP_12261937.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_EH250]
 gi|417616819|ref|ZP_12267253.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli G58-1]
 gi|417826430|ref|ZP_12473009.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri J1713]
 gi|418042547|ref|ZP_12680740.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli W26]
 gi|419395019|ref|ZP_13935804.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15B]
 gi|419805353|ref|ZP_14330491.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli AI27]
 gi|420296226|ref|ZP_14798323.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW09109]
 gi|420345486|ref|ZP_14846918.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 965-58]
 gi|420378657|ref|ZP_14878156.1| cytochrome o ubiquinol oxidase, subunit I [Shigella dysenteriae
           225-75]
 gi|420389770|ref|ZP_14889043.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EPEC
           C342-62]
 gi|425095916|ref|ZP_18498957.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.4870]
 gi|425141958|ref|ZP_18542265.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           10.0869]
 gi|425172146|ref|ZP_18570560.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA504]
 gi|425184175|ref|ZP_18581814.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1997]
 gi|425203916|ref|ZP_18600060.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK2001]
 gi|425377251|ref|ZP_18761653.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1865]
 gi|428944911|ref|ZP_19017570.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           88.1467]
 gi|428956921|ref|ZP_19028631.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           89.0511]
 gi|429064988|ref|ZP_19128857.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0672]
 gi|444939998|ref|ZP_21258647.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0816]
 gi|444945553|ref|ZP_21263975.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0839]
 gi|323191349|gb|EFZ76612.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           RN587/1]
 gi|335577194|gb|EGM63422.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri J1713]
 gi|345365948|gb|EGW98046.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_EH250]
 gi|345381191|gb|EGX13076.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli G58-1]
 gi|378251871|gb|EHY11767.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15B]
 gi|383474506|gb|EID66492.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli W26]
 gi|384471612|gb|EIE55685.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli AI27]
 gi|390811998|gb|EIO78683.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW09109]
 gi|391276370|gb|EIQ35142.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 965-58]
 gi|391289271|gb|EIQ47766.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 3233-85]
 gi|391306890|gb|EIQ64638.1| cytochrome o ubiquinol oxidase, subunit I [Shigella dysenteriae
           225-75]
 gi|391315315|gb|EIQ72848.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EPEC
           C342-62]
 gi|408102847|gb|EKH35236.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA504]
 gi|408116874|gb|EKH48141.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1997]
 gi|408132494|gb|EKH62470.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK2001]
 gi|408310085|gb|EKJ27169.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1865]
 gi|408559370|gb|EKK35693.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.4870]
 gi|408604548|gb|EKK78122.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           10.0869]
 gi|427217273|gb|EKV86342.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           89.0511]
 gi|427217759|gb|EKV86811.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           88.1467]
 gi|427336789|gb|EKW97738.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0672]
 gi|444564994|gb|ELV41895.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0839]
 gi|444567152|gb|ELV43922.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0816]
          Length = 646

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 51  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 171 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 231 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 411 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 471 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 531 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 591 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 633


>gi|194289181|ref|YP_002005088.1| cytochrome o ubiquinol oxidase subunit i [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223016|emb|CAQ69021.1| cytochrome o ubiquinol oxidase, subunit I [Cupriavidus taiwanensis
           LMG 19424]
          Length = 657

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/584 (65%), Positives = 465/584 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++   + G LPPEHY+QIFTAHGVIMIFFVAMPL+TG++N +V
Sbjct: 68  MLLRGFADAVMMRTQLALATNGATGVLPPEHYDQIFTAHGVIMIFFVAMPLMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLFVAGAMLVNISLGVGEFAKTGWLAYPPLSGLDYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N + TI++MRAPGM LM MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 188 DYYLWSLQISGLGTLLTGVNFLVTILRMRAPGMTLMRMPVFTWTALCTNVLIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 248 VTLALLGLDRYLGMHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYKGMVYATAAIMVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++   P+LWT+GFMITFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQMTSPVLWTLGFMITFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++GI YW+PKAFG+KL    GK SFW WL+GFY AFMPLY+LG MG+TRR++H +
Sbjct: 428 VLFGYLAGITYWWPKAFGFKLNERLGKASFWCWLVGFYFAFMPLYVLGLMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G + +A+GI   ++Q++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWTPWLYLAVVGVVFVALGIFFQVLQIVVSIRDRKKLADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P++   D++  MK      P + ++ I MPKNT  G +I  FSL+ GFAL W
Sbjct: 548 PFYNFAHTPVVRDLDAFADMKARGETLPTEGYEKIHMPKNTGAGFIIGAFSLVFGFALTW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L I+  +  +   I+ + +   +YY+ + E+  IE + ++
Sbjct: 608 HIWWLAIVGLVGMIWAFIHRSNDDHIDYYVPATEVEQIETRHLQ 651


>gi|432848209|ref|ZP_20080081.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE144]
 gi|431402558|gb|ELG85870.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE144]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L II F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIIGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|417120956|ref|ZP_11970410.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0246]
 gi|386148686|gb|EIG95121.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0246]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHIHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|15800161|ref|NP_286173.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. EDL933]
 gi|15829739|ref|NP_308512.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. Sakai]
 gi|16128416|ref|NP_414965.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           K-12 substr. MG1655]
 gi|26246437|ref|NP_752476.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli CFT073]
 gi|74311006|ref|YP_309425.1| cytochrome o ubiquinol oxidase subunit I [Shigella sonnei Ss046]
 gi|91209501|ref|YP_539487.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli UTI89]
 gi|117622691|ref|YP_851604.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli APEC O1]
 gi|157155647|ref|YP_001461617.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli E24377A]
 gi|157159956|ref|YP_001457274.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli HS]
 gi|168749893|ref|ZP_02774915.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4113]
 gi|168756973|ref|ZP_02781980.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4401]
 gi|168761637|ref|ZP_02786644.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4501]
 gi|168768382|ref|ZP_02793389.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4486]
 gi|168776263|ref|ZP_02801270.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4196]
 gi|168783297|ref|ZP_02808304.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4076]
 gi|168786278|ref|ZP_02811285.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC869]
 gi|168800314|ref|ZP_02825321.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC508]
 gi|170021197|ref|YP_001726151.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli ATCC
           8739]
 gi|170080017|ref|YP_001729337.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170683544|ref|YP_001742572.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           SMS-3-5]
 gi|188492346|ref|ZP_02999616.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 53638]
 gi|193065165|ref|ZP_03046238.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli E22]
 gi|193068597|ref|ZP_03049558.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           E110019]
 gi|194428820|ref|ZP_03061355.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli B171]
 gi|194432672|ref|ZP_03064958.1| cytochrome o ubiquinol oxidase, subunit I [Shigella dysenteriae
           1012]
 gi|194438909|ref|ZP_03070994.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 101-1]
 gi|208806406|ref|ZP_03248743.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4206]
 gi|208815517|ref|ZP_03256696.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4045]
 gi|208823257|ref|ZP_03263575.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4042]
 gi|209398374|ref|YP_002269077.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. EC4115]
 gi|209917647|ref|YP_002291731.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli SE11]
 gi|215485512|ref|YP_002327943.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O127:H6
           str. E2348/69]
 gi|217325466|ref|ZP_03441550.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. TW14588]
 gi|218549901|ref|YP_002383692.1| cytochrome o ubiquinol oxidase subunit I [Escherichia fergusonii
           ATCC 35469]
 gi|218552997|ref|YP_002385910.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli IAI1]
 gi|218557340|ref|YP_002390253.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli S88]
 gi|218688294|ref|YP_002396506.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli ED1a]
 gi|218693894|ref|YP_002401561.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 55989]
 gi|218698657|ref|YP_002406286.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli IAI39]
 gi|218703714|ref|YP_002411233.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli UMN026]
 gi|222155221|ref|YP_002555360.1| Ubiquinol oxidase subunit 1 [Escherichia coli LF82]
 gi|227884560|ref|ZP_04002365.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 83972]
 gi|237707575|ref|ZP_04538056.1| cytochrome o ubiquinol oxidase subunit I [Escherichia sp.
           3_2_53FAA]
 gi|238899719|ref|YP_002925515.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli BW2952]
 gi|251783939|ref|YP_002998243.1| cytochrome bo terminal oxidase subunit I, subunit of cytochrome bo
           terminal oxidase [Escherichia coli BL21(DE3)]
 gi|253774581|ref|YP_003037412.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160500|ref|YP_003043608.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli B str.
           REL606]
 gi|254287304|ref|YP_003053052.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           BL21(DE3)]
 gi|254791615|ref|YP_003076452.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. TW14359]
 gi|260842632|ref|YP_003220410.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O103:H2
           str. 12009]
 gi|260853654|ref|YP_003227545.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. 11368]
 gi|260866592|ref|YP_003232994.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H-
           str. 11128]
 gi|261223912|ref|ZP_05938193.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261256374|ref|ZP_05948907.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281338|ref|YP_003498156.1| ubiquinol oxidase subunit 1 (ubiquinol oxidase polypeptide I)
           (cytochrome o subunit 1) (Oxidase BO(3) subunit 1)
           [Escherichia coli O55:H7 str. CB9615]
 gi|293403551|ref|ZP_06647642.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli
           FVEC1412]
 gi|293408580|ref|ZP_06652419.1| cytochrome o ubiquinol oxidase [Escherichia coli B354]
 gi|293413686|ref|ZP_06656335.1| cytochrome o ubiquinol oxidase [Escherichia coli B185]
 gi|293418501|ref|ZP_06660936.1| cytochrome o ubiquinol oxidase [Escherichia coli B088]
 gi|297516404|ref|ZP_06934790.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli OP50]
 gi|298379163|ref|ZP_06989044.1| ubiquinol oxidase subunit 1 [Escherichia coli FVEC1302]
 gi|300818240|ref|ZP_07098451.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           107-1]
 gi|300820326|ref|ZP_07100478.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           119-7]
 gi|300900499|ref|ZP_07118666.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           198-1]
 gi|300903304|ref|ZP_07121232.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           84-1]
 gi|300924156|ref|ZP_07140148.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           182-1]
 gi|300930269|ref|ZP_07145682.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           187-1]
 gi|300937045|ref|ZP_07151911.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           21-1]
 gi|300988016|ref|ZP_07178496.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           45-1]
 gi|301022578|ref|ZP_07186450.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           69-1]
 gi|301301579|ref|ZP_07207714.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           124-1]
 gi|301330703|ref|ZP_07223305.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           78-1]
 gi|301647354|ref|ZP_07247166.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           146-1]
 gi|307312191|ref|ZP_07591827.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli W]
 gi|309794839|ref|ZP_07689260.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           145-7]
 gi|312970526|ref|ZP_07784707.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           1827-70]
 gi|331640949|ref|ZP_08342084.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli H736]
 gi|331656486|ref|ZP_08357448.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA206]
 gi|331661810|ref|ZP_08362733.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA143]
 gi|331666785|ref|ZP_08367659.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA271]
 gi|331671977|ref|ZP_08372773.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA280]
 gi|331676102|ref|ZP_08376814.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli H591]
 gi|331681825|ref|ZP_08382458.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli H299]
 gi|332281581|ref|ZP_08393994.1| cytochrome o ubiquinol oxidase subunit I [Shigella sp. D9]
 gi|378714163|ref|YP_005279056.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KO11FL]
 gi|383177020|ref|YP_005455025.1| cytochrome o ubiquinol oxidase subunit I [Shigella sonnei 53G]
 gi|386279457|ref|ZP_10057138.1| ubiquinol oxidase subunit 1 [Escherichia sp. 4_1_40B]
 gi|386596693|ref|YP_006093093.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli DH1]
 gi|386598146|ref|YP_006099652.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli IHE3034]
 gi|386605616|ref|YP_006111916.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli UM146]
 gi|386607794|ref|YP_006123280.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli W]
 gi|386612625|ref|YP_006132291.1| cytochrome O ubiquinol oxidase subunit I CyoB [Escherichia coli
           UMNK88]
 gi|386622801|ref|YP_006142529.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O7:K1
           str. CE10]
 gi|386628018|ref|YP_006147738.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           'clone D i2']
 gi|386632938|ref|YP_006152657.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           'clone D i14']
 gi|386637845|ref|YP_006104643.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli ABU
           83972]
 gi|386702763|ref|YP_006166600.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KO11FL]
 gi|386703648|ref|YP_006167495.1| ubiquinol oxidase subunit I [Escherichia coli P12b]
 gi|386708233|ref|YP_006171954.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli W]
 gi|387505447|ref|YP_006157703.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O55:H7
           str. RM12579]
 gi|387605941|ref|YP_006094797.1| cytochrome o ubiquinol oxidase subunit 1 [Escherichia coli 042]
 gi|387610956|ref|YP_006114072.1| cytochrome o ubiquinol oxidase subunit 1 [Escherichia coli ETEC
           H10407]
 gi|387615747|ref|YP_006118769.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O83:H1
           str. NRG 857C]
 gi|387620190|ref|YP_006127817.1| ubiquinol oxidase subunit [Escherichia coli DH1]
 gi|387881027|ref|YP_006311329.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           Xuzhou21]
 gi|388476537|ref|YP_488723.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           K-12 substr. W3110]
 gi|404373753|ref|ZP_10978988.1| ubiquinol oxidase subunit 1 [Escherichia sp. 1_1_43]
 gi|407467880|ref|YP_006785678.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 2009EL-2071]
 gi|407483389|ref|YP_006780538.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 2011C-3493]
 gi|410483943|ref|YP_006771489.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 2009EL-2050]
 gi|415777149|ref|ZP_11488401.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3431]
 gi|415801149|ref|ZP_11499550.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           E128010]
 gi|415814590|ref|ZP_11506188.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli LT-68]
 gi|415821045|ref|ZP_11510059.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli OK1180]
 gi|415828324|ref|ZP_11514921.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli OK1357]
 gi|415862706|ref|ZP_11536146.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           85-1]
 gi|415873829|ref|ZP_11541002.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           79-10]
 gi|416273485|ref|ZP_11643400.1| Cytochrome O ubiquinol oxidase subunit I [Shigella dysenteriae CDC
           74-1112]
 gi|416281016|ref|ZP_11645586.1| Cytochrome O ubiquinol oxidase subunit I [Shigella boydii ATCC
           9905]
 gi|416312984|ref|ZP_11657919.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. 1044]
 gi|416316800|ref|ZP_11659932.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. EC1212]
 gi|416325632|ref|ZP_11666040.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. 1125]
 gi|416341375|ref|ZP_11675998.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli EC4100B]
 gi|416780499|ref|ZP_11876885.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. G5101]
 gi|416791650|ref|ZP_11881783.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H-
           str. 493-89]
 gi|416803293|ref|ZP_11886644.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H-
           str. H 2687]
 gi|416811864|ref|ZP_11890137.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O55:H7
           str. 3256-97]
 gi|416822825|ref|ZP_11895152.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O55:H7
           str. USDA 5905]
 gi|416834999|ref|ZP_11901247.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. LSU-61]
 gi|416895859|ref|ZP_11925743.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_7v]
 gi|417082896|ref|ZP_11951065.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           cloneA_i1]
 gi|417114555|ref|ZP_11965826.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 1.2741]
 gi|417133397|ref|ZP_11978182.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5.0588]
 gi|417139251|ref|ZP_11982673.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0259]
 gi|417144807|ref|ZP_11986613.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 1.2264]
 gi|417152794|ref|ZP_11991585.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0497]
 gi|417168527|ref|ZP_12000978.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0741]
 gi|417176373|ref|ZP_12006169.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.2608]
 gi|417179259|ref|ZP_12007359.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           93.0624]
 gi|417191044|ref|ZP_12013640.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 4.0522]
 gi|417218324|ref|ZP_12023926.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli JB1-95]
 gi|417225378|ref|ZP_12028669.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 96.154]
 gi|417230202|ref|ZP_12031788.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5.0959]
 gi|417247175|ref|ZP_12040276.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 9.0111]
 gi|417252636|ref|ZP_12044395.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 4.0967]
 gi|417260560|ref|ZP_12048058.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 2.3916]
 gi|417267846|ref|ZP_12055207.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.3884]
 gi|417270598|ref|ZP_12057951.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 2.4168]
 gi|417275504|ref|ZP_12062841.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.2303]
 gi|417284267|ref|ZP_12071562.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3003]
 gi|417288338|ref|ZP_12075623.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW07793]
 gi|417293147|ref|ZP_12080427.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli B41]
 gi|417299288|ref|ZP_12086518.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 900105
           (10e)]
 gi|417306930|ref|ZP_12093810.1| Cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PCN033]
 gi|417579654|ref|ZP_12230476.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_B2F1]
 gi|417585225|ref|ZP_12236005.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_C165-02]
 gi|417590112|ref|ZP_12240832.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           2534-86]
 gi|417595354|ref|ZP_12246024.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3030-1]
 gi|417600711|ref|ZP_12251296.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_94C]
 gi|417606421|ref|ZP_12256950.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_DG131-3]
 gi|417621699|ref|ZP_12272028.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_H.1.8]
 gi|417627372|ref|ZP_12277619.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_MHI813]
 gi|417632915|ref|ZP_12283136.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_S1191]
 gi|417637730|ref|ZP_12287905.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TX1999]
 gi|417665516|ref|ZP_12315083.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_O31]
 gi|417674374|ref|ZP_12323807.1| cytochrome o ubiquinol oxidase, subunit I [Shigella dysenteriae
           155-74]
 gi|417803786|ref|ZP_12450821.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. LB226692]
 gi|417831538|ref|ZP_12478060.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 01-09591]
 gi|417867736|ref|ZP_12512771.1| cyoB [Escherichia coli O104:H4 str. C227-11]
 gi|417945751|ref|ZP_12588980.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli XH140A]
 gi|417976597|ref|ZP_12617389.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli XH001]
 gi|418262470|ref|ZP_12883849.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei str.
           Moseley]
 gi|418301281|ref|ZP_12913075.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli UMNF18]
 gi|418941040|ref|ZP_13494380.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H43
           str. T22]
 gi|418959276|ref|ZP_13511175.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli J53]
 gi|419000586|ref|ZP_13548148.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1B]
 gi|419006120|ref|ZP_13553576.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1C]
 gi|419011987|ref|ZP_13559352.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1D]
 gi|419016891|ref|ZP_13564217.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1E]
 gi|419022582|ref|ZP_13569824.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2A]
 gi|419027393|ref|ZP_13574593.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2C]
 gi|419033503|ref|ZP_13580601.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2D]
 gi|419038173|ref|ZP_13585233.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2E]
 gi|419043626|ref|ZP_13590600.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3A]
 gi|419049031|ref|ZP_13595950.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3B]
 gi|419055086|ref|ZP_13601944.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3C]
 gi|419060679|ref|ZP_13607464.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3D]
 gi|419066558|ref|ZP_13613239.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3E]
 gi|419073507|ref|ZP_13619080.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3F]
 gi|419078743|ref|ZP_13624228.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4A]
 gi|419084394|ref|ZP_13629810.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4B]
 gi|419090471|ref|ZP_13635791.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4C]
 gi|419096306|ref|ZP_13641550.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4D]
 gi|419102064|ref|ZP_13647231.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4E]
 gi|419107517|ref|ZP_13652627.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4F]
 gi|419113284|ref|ZP_13658319.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5A]
 gi|419118870|ref|ZP_13663855.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5B]
 gi|419124600|ref|ZP_13669504.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5C]
 gi|419130090|ref|ZP_13674943.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5D]
 gi|419134848|ref|ZP_13679657.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5E]
 gi|419140961|ref|ZP_13685718.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6A]
 gi|419146528|ref|ZP_13691224.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6B]
 gi|419152262|ref|ZP_13696850.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6C]
 gi|419157770|ref|ZP_13702296.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6D]
 gi|419162703|ref|ZP_13707183.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6E]
 gi|419168425|ref|ZP_13712823.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7A]
 gi|419173800|ref|ZP_13717656.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7B]
 gi|419179419|ref|ZP_13723044.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7C]
 gi|419184977|ref|ZP_13728499.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7D]
 gi|419190225|ref|ZP_13733693.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7E]
 gi|419195527|ref|ZP_13738935.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8A]
 gi|419201516|ref|ZP_13744744.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8B]
 gi|419207430|ref|ZP_13750558.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8C]
 gi|419213871|ref|ZP_13756903.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8D]
 gi|419219694|ref|ZP_13762651.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8E]
 gi|419225159|ref|ZP_13768049.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9A]
 gi|419230974|ref|ZP_13773766.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9B]
 gi|419236278|ref|ZP_13779029.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9C]
 gi|419241872|ref|ZP_13784522.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9D]
 gi|419247281|ref|ZP_13789896.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9E]
 gi|419253056|ref|ZP_13795606.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10A]
 gi|419259066|ref|ZP_13801526.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10B]
 gi|419265123|ref|ZP_13807510.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10C]
 gi|419270753|ref|ZP_13813086.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10D]
 gi|419276551|ref|ZP_13818821.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10E]
 gi|419282154|ref|ZP_13824376.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10F]
 gi|419287895|ref|ZP_13830013.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11A]
 gi|419293233|ref|ZP_13835294.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11B]
 gi|419298674|ref|ZP_13840692.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11C]
 gi|419315302|ref|ZP_13857130.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12A]
 gi|419321078|ref|ZP_13862821.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12B]
 gi|419327324|ref|ZP_13868957.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12C]
 gi|419332734|ref|ZP_13874298.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12D]
 gi|419339671|ref|ZP_13881148.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12E]
 gi|419344078|ref|ZP_13885462.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13A]
 gi|419348511|ref|ZP_13889864.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13B]
 gi|419353414|ref|ZP_13894700.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13C]
 gi|419358757|ref|ZP_13899988.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13D]
 gi|419363764|ref|ZP_13904946.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13E]
 gi|419368714|ref|ZP_13909843.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14A]
 gi|419373899|ref|ZP_13914955.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14B]
 gi|419379317|ref|ZP_13920298.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14C]
 gi|419384573|ref|ZP_13925477.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14D]
 gi|419389847|ref|ZP_13930686.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15A]
 gi|419400370|ref|ZP_13941104.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15C]
 gi|419405542|ref|ZP_13946246.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15D]
 gi|419411036|ref|ZP_13951709.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15E]
 gi|419699347|ref|ZP_14226963.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli SCI-07]
 gi|419811826|ref|ZP_14336698.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O32:H37
           str. P4]
 gi|419862457|ref|ZP_14385062.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O103:H25
           str. CVM9340]
 gi|419867906|ref|ZP_14390220.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O103:H2
           str. CVM9450]
 gi|419876962|ref|ZP_14398621.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9534]
 gi|419882611|ref|ZP_14403821.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9545]
 gi|419888449|ref|ZP_14408956.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9570]
 gi|419893044|ref|ZP_14413050.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9574]
 gi|419900600|ref|ZP_14420026.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM9942]
 gi|419906398|ref|ZP_14425310.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10026]
 gi|419915485|ref|ZP_14433850.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KD1]
 gi|419916852|ref|ZP_14435136.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KD2]
 gi|419928048|ref|ZP_14445768.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 541-1]
 gi|419937115|ref|ZP_14454031.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 576-1]
 gi|419941399|ref|ZP_14458087.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 75]
 gi|419945565|ref|ZP_14462003.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli HM605]
 gi|419948931|ref|ZP_14465194.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli CUMT8]
 gi|420088249|ref|ZP_14600153.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9602]
 gi|420092941|ref|ZP_14604631.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9634]
 gi|420103071|ref|ZP_14613985.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9455]
 gi|420109700|ref|ZP_14619800.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9553]
 gi|420113381|ref|ZP_14623124.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10021]
 gi|420119633|ref|ZP_14628898.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10030]
 gi|420125710|ref|ZP_14634501.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10224]
 gi|420130821|ref|ZP_14639301.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM9952]
 gi|420267942|ref|ZP_14770349.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA22]
 gi|420273495|ref|ZP_14775828.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA40]
 gi|420278599|ref|ZP_14780866.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW06591]
 gi|420284818|ref|ZP_14787036.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW10246]
 gi|420290565|ref|ZP_14792730.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW11039]
 gi|420302107|ref|ZP_14804139.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW10119]
 gi|420307989|ref|ZP_14809963.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1738]
 gi|420313376|ref|ZP_14815284.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1734]
 gi|420357055|ref|ZP_14858071.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 3226-85]
 gi|420362010|ref|ZP_14862936.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 4822-66]
 gi|420384068|ref|ZP_14883456.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           EPECa12]
 gi|421681133|ref|ZP_16120963.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           1485-80]
 gi|421777846|ref|ZP_16214436.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli AD30]
 gi|421810652|ref|ZP_16246463.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0416]
 gi|421816745|ref|ZP_16252308.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           10.0821]
 gi|421822130|ref|ZP_16257568.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK920]
 gi|421828863|ref|ZP_16264193.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA7]
 gi|422330688|ref|ZP_16411705.1| ubiquinol oxidase subunit 1 [Escherichia coli 4_1_47FAA]
 gi|422355337|ref|ZP_16436053.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           117-3]
 gi|422356292|ref|ZP_16436981.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           110-3]
 gi|422363037|ref|ZP_16443585.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           153-1]
 gi|422368696|ref|ZP_16449101.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           16-3]
 gi|422378671|ref|ZP_16458878.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           57-2]
 gi|422748502|ref|ZP_16802415.1| cytochrome o ubiquinol oxidase [Escherichia coli H252]
 gi|422753084|ref|ZP_16806911.1| cytochrome o ubiquinol oxidase [Escherichia coli H263]
 gi|422763225|ref|ZP_16816980.1| cytochrome o ubiquinol oxidase [Escherichia coli E1167]
 gi|422764961|ref|ZP_16818688.1| cytochrome o ubiquinol oxidase [Escherichia coli E1520]
 gi|422769659|ref|ZP_16823350.1| cytochrome o ubiquinol oxidase [Escherichia coli E482]
 gi|422777127|ref|ZP_16830780.1| cytochrome o ubiquinol oxidase [Escherichia coli H120]
 gi|422782777|ref|ZP_16835562.1| cytochrome o ubiquinol oxidase [Escherichia coli TW10509]
 gi|422785040|ref|ZP_16837779.1| cytochrome o ubiquinol oxidase [Escherichia coli H489]
 gi|422791238|ref|ZP_16843941.1| cytochrome o ubiquinol oxidase [Escherichia coli TA007]
 gi|422802311|ref|ZP_16850805.1| cytochrome o ubiquinol oxidase [Escherichia coli M863]
 gi|422804510|ref|ZP_16852942.1| cytochrome o ubiquinol oxidase [Escherichia fergusonii B253]
 gi|422816445|ref|ZP_16864660.1| ubiquinol oxidase subunit 1 [Escherichia coli M919]
 gi|422830609|ref|ZP_16878765.1| ubiquinol oxidase subunit 1 [Escherichia coli B093]
 gi|422835153|ref|ZP_16883210.1| ubiquinol oxidase subunit 1 [Escherichia coli E101]
 gi|422838953|ref|ZP_16886925.1| ubiquinol oxidase subunit 1 [Escherichia coli H397]
 gi|422960318|ref|ZP_16971766.1| ubiquinol oxidase subunit 1 [Escherichia coli H494]
 gi|422974752|ref|ZP_16976453.1| ubiquinol oxidase subunit 1 [Escherichia coli TA124]
 gi|422991147|ref|ZP_16981918.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. C227-11]
 gi|422993086|ref|ZP_16983850.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. C236-11]
 gi|422998297|ref|ZP_16989053.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 09-7901]
 gi|423006758|ref|ZP_16997501.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 04-8351]
 gi|423008401|ref|ZP_16999139.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-3677]
 gi|423022588|ref|ZP_17013291.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4404]
 gi|423027742|ref|ZP_17018435.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4522]
 gi|423033579|ref|ZP_17024263.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4623]
 gi|423036445|ref|ZP_17027119.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C1]
 gi|423041565|ref|ZP_17032232.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C2]
 gi|423048251|ref|ZP_17038908.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C3]
 gi|423051835|ref|ZP_17040643.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C4]
 gi|423058800|ref|ZP_17047596.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C5]
 gi|423652925|ref|ZP_17628228.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA31]
 gi|423701212|ref|ZP_17675671.1| ubiquinol oxidase subunit 1 [Escherichia coli H730]
 gi|423710202|ref|ZP_17684552.1| ubiquinol oxidase subunit 1 [Escherichia coli B799]
 gi|424075291|ref|ZP_17812655.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA505]
 gi|424081619|ref|ZP_17818495.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA517]
 gi|424088240|ref|ZP_17824515.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1996]
 gi|424094459|ref|ZP_17830234.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1985]
 gi|424100861|ref|ZP_17836040.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1990]
 gi|424107674|ref|ZP_17842268.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 93-001]
 gi|424113664|ref|ZP_17847832.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA3]
 gi|424119725|ref|ZP_17853455.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA5]
 gi|424125985|ref|ZP_17859203.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA9]
 gi|424132068|ref|ZP_17864887.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA10]
 gi|424138614|ref|ZP_17870926.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA14]
 gi|424145054|ref|ZP_17876841.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA15]
 gi|424151201|ref|ZP_17882472.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA24]
 gi|424184938|ref|ZP_17887904.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA25]
 gi|424266443|ref|ZP_17893806.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA28]
 gi|424421793|ref|ZP_17899536.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA32]
 gi|424453608|ref|ZP_17905163.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA33]
 gi|424459906|ref|ZP_17910864.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA39]
 gi|424466375|ref|ZP_17916583.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA41]
 gi|424472936|ref|ZP_17922629.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA42]
 gi|424478884|ref|ZP_17928147.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW07945]
 gi|424484954|ref|ZP_17933838.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW09098]
 gi|424491073|ref|ZP_17939489.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW09195]
 gi|424498165|ref|ZP_17945455.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4203]
 gi|424504394|ref|ZP_17951190.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4196]
 gi|424510652|ref|ZP_17956906.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW14313]
 gi|424518220|ref|ZP_17962666.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW14301]
 gi|424524049|ref|ZP_17968090.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4421]
 gi|424530257|ref|ZP_17973903.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4422]
 gi|424536231|ref|ZP_17979510.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4013]
 gi|424542139|ref|ZP_17984976.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4402]
 gi|424548464|ref|ZP_17990688.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4439]
 gi|424554727|ref|ZP_17996465.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4436]
 gi|424561074|ref|ZP_18002375.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4437]
 gi|424567102|ref|ZP_18008034.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4448]
 gi|424573290|ref|ZP_18013729.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1845]
 gi|424579245|ref|ZP_18019194.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1863]
 gi|424747936|ref|ZP_18176088.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CFSAN001629]
 gi|424766691|ref|ZP_18194036.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CFSAN001630]
 gi|424768149|ref|ZP_18195441.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CFSAN001632]
 gi|424817258|ref|ZP_18242409.1| cytochrome o ubiquinol oxidase subunit I [Escherichia fergusonii
           ECD227]
 gi|425102055|ref|ZP_18504720.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5.2239]
 gi|425107856|ref|ZP_18510124.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 6.0172]
 gi|425113758|ref|ZP_18515596.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0566]
 gi|425118524|ref|ZP_18520259.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0569]
 gi|425123678|ref|ZP_18525272.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0586]
 gi|425129718|ref|ZP_18530834.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.2524]
 gi|425136058|ref|ZP_18536797.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           10.0833]
 gi|425148276|ref|ZP_18548187.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           88.0221]
 gi|425153894|ref|ZP_18553457.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA34]
 gi|425160343|ref|ZP_18559532.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA506]
 gi|425165853|ref|ZP_18564677.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA507]
 gi|425178026|ref|ZP_18576095.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1999]
 gi|425190926|ref|ZP_18588067.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli NE1487]
 gi|425197255|ref|ZP_18593920.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli NE037]
 gi|425209671|ref|ZP_18605422.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA4]
 gi|425215711|ref|ZP_18611044.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA23]
 gi|425222281|ref|ZP_18617155.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA49]
 gi|425228526|ref|ZP_18622937.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA45]
 gi|425234826|ref|ZP_18628800.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TT12B]
 gi|425240831|ref|ZP_18634481.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MA6]
 gi|425246955|ref|ZP_18640179.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5905]
 gi|425252687|ref|ZP_18645579.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli CB7326]
 gi|425258997|ref|ZP_18651375.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           EC96038]
 gi|425265096|ref|ZP_18657034.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5412]
 gi|425271126|ref|ZP_18662640.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW15901]
 gi|425276304|ref|ZP_18667648.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           ARS4.2123]
 gi|425281798|ref|ZP_18672919.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW00353]
 gi|425286988|ref|ZP_18677923.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3006]
 gi|425292555|ref|ZP_18683154.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA38]
 gi|425298627|ref|ZP_18688677.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 07798]
 gi|425303936|ref|ZP_18693725.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli N1]
 gi|425309298|ref|ZP_18698778.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1735]
 gi|425315211|ref|ZP_18704301.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1736]
 gi|425321264|ref|ZP_18709951.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1737]
 gi|425327456|ref|ZP_18715692.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1846]
 gi|425333641|ref|ZP_18721374.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1847]
 gi|425340062|ref|ZP_18727317.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1848]
 gi|425345940|ref|ZP_18732756.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1849]
 gi|425352153|ref|ZP_18738547.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1850]
 gi|425358143|ref|ZP_18744129.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1856]
 gi|425364253|ref|ZP_18749816.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1862]
 gi|425370698|ref|ZP_18755674.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1864]
 gi|425383492|ref|ZP_18767383.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1866]
 gi|425390192|ref|ZP_18773662.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1868]
 gi|425396310|ref|ZP_18779368.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1869]
 gi|425402295|ref|ZP_18784911.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1870]
 gi|425408836|ref|ZP_18791003.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli NE098]
 gi|425415106|ref|ZP_18796756.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK523]
 gi|425421043|ref|ZP_18802274.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 0.1288]
 gi|425426262|ref|ZP_18807323.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 0.1304]
 gi|427803498|ref|ZP_18970565.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli chi7122]
 gi|427808116|ref|ZP_18975181.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|428951065|ref|ZP_19023211.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           88.1042]
 gi|428963253|ref|ZP_19034449.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           90.0091]
 gi|428969318|ref|ZP_19039960.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           90.0039]
 gi|428975869|ref|ZP_19046050.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           90.2281]
 gi|428981486|ref|ZP_19051232.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           93.0055]
 gi|428987872|ref|ZP_19057172.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           93.0056]
 gi|428993683|ref|ZP_19062598.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           94.0618]
 gi|428999782|ref|ZP_19068300.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.0183]
 gi|429006024|ref|ZP_19073948.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.1288]
 gi|429012369|ref|ZP_19079630.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.0943]
 gi|429018570|ref|ZP_19085363.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0428]
 gi|429024260|ref|ZP_19090680.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0427]
 gi|429030573|ref|ZP_19096459.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0939]
 gi|429036759|ref|ZP_19102208.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0932]
 gi|429042672|ref|ZP_19107686.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0107]
 gi|429048487|ref|ZP_19113147.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0003]
 gi|429059543|ref|ZP_19123695.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0007]
 gi|429071555|ref|ZP_19134912.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0678]
 gi|429076820|ref|ZP_19140040.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0713]
 gi|429722627|ref|ZP_19257525.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-9450]
 gi|429774724|ref|ZP_19306727.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02030]
 gi|429779987|ref|ZP_19311940.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02033-1]
 gi|429784039|ref|ZP_19315952.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02092]
 gi|429789377|ref|ZP_19321252.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02093]
 gi|429795607|ref|ZP_19327433.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02281]
 gi|429801533|ref|ZP_19333311.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02318]
 gi|429805165|ref|ZP_19336912.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02913]
 gi|429809976|ref|ZP_19341678.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-03439]
 gi|429815736|ref|ZP_19347395.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-04080]
 gi|429821324|ref|ZP_19352937.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-03943]
 gi|429824037|ref|ZP_19355554.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0109]
 gi|429830404|ref|ZP_19361271.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0010]
 gi|429906998|ref|ZP_19372967.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-9990]
 gi|429911196|ref|ZP_19377152.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-9941]
 gi|429917032|ref|ZP_19382972.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4984]
 gi|429922070|ref|ZP_19387991.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-5604]
 gi|429927888|ref|ZP_19393794.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4986]
 gi|429931820|ref|ZP_19397715.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4987]
 gi|429933422|ref|ZP_19399312.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4988]
 gi|429939076|ref|ZP_19404950.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-5603]
 gi|429946719|ref|ZP_19412574.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-6006]
 gi|429949351|ref|ZP_19415199.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec12-0465]
 gi|429957635|ref|ZP_19423464.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec12-0466]
 gi|432352094|ref|ZP_19595403.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE2]
 gi|432356775|ref|ZP_19600022.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE4]
 gi|432361182|ref|ZP_19604379.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE5]
 gi|432368410|ref|ZP_19611515.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE10]
 gi|432375514|ref|ZP_19618528.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE12]
 gi|432390359|ref|ZP_19633223.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE21]
 gi|432400543|ref|ZP_19643303.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE26]
 gi|432405301|ref|ZP_19648024.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE28]
 gi|432410500|ref|ZP_19653183.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE39]
 gi|432415383|ref|ZP_19658014.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE44]
 gi|432429580|ref|ZP_19672040.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE181]
 gi|432430547|ref|ZP_19672992.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE187]
 gi|432435076|ref|ZP_19677477.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE188]
 gi|432439744|ref|ZP_19682107.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE189]
 gi|432444868|ref|ZP_19687177.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE191]
 gi|432453241|ref|ZP_19695481.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE193]
 gi|432455359|ref|ZP_19697561.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE201]
 gi|432459402|ref|ZP_19701566.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE204]
 gi|432464443|ref|ZP_19706551.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE205]
 gi|432474451|ref|ZP_19716464.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE208]
 gi|432479792|ref|ZP_19721757.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE210]
 gi|432484159|ref|ZP_19726083.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE212]
 gi|432492727|ref|ZP_19734566.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE213]
 gi|432494300|ref|ZP_19736118.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE214]
 gi|432503139|ref|ZP_19744876.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE220]
 gi|432521068|ref|ZP_19758233.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE228]
 gi|432522584|ref|ZP_19759723.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE230]
 gi|432529799|ref|ZP_19766843.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE233]
 gi|432541285|ref|ZP_19778160.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE235]
 gi|432541807|ref|ZP_19778668.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE236]
 gi|432547151|ref|ZP_19783948.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE237]
 gi|432552439|ref|ZP_19789171.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE47]
 gi|432562341|ref|ZP_19798968.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE51]
 gi|432567270|ref|ZP_19803797.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE53]
 gi|432572426|ref|ZP_19808917.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE55]
 gi|432582542|ref|ZP_19818952.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE57]
 gi|432586730|ref|ZP_19823102.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE58]
 gi|432591550|ref|ZP_19827879.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE60]
 gi|432596316|ref|ZP_19832605.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE62]
 gi|432600948|ref|ZP_19837203.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE66]
 gi|432606316|ref|ZP_19842512.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE67]
 gi|432615205|ref|ZP_19851340.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE75]
 gi|432620534|ref|ZP_19856580.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE76]
 gi|432626015|ref|ZP_19862000.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE77]
 gi|432630001|ref|ZP_19865951.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE80]
 gi|432635745|ref|ZP_19871631.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE81]
 gi|432639550|ref|ZP_19875395.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE83]
 gi|432649959|ref|ZP_19885721.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE87]
 gi|432664619|ref|ZP_19900215.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE116]
 gi|432669363|ref|ZP_19904912.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE119]
 gi|432678026|ref|ZP_19913452.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE142]
 gi|432678853|ref|ZP_19914256.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE143]
 gi|432684264|ref|ZP_19919583.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE156]
 gi|432690321|ref|ZP_19925567.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE161]
 gi|432703003|ref|ZP_19938129.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE171]
 gi|432717443|ref|ZP_19952445.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE9]
 gi|432731155|ref|ZP_19965994.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE45]
 gi|432735957|ref|ZP_19970733.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE42]
 gi|432748887|ref|ZP_19983510.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE29]
 gi|432753228|ref|ZP_19987796.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE22]
 gi|432758215|ref|ZP_19992738.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE46]
 gi|432763722|ref|ZP_19998174.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE48]
 gi|432769232|ref|ZP_20003605.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE50]
 gi|432773611|ref|ZP_20007901.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE54]
 gi|432777283|ref|ZP_20011537.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE59]
 gi|432782339|ref|ZP_20016525.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE63]
 gi|432786079|ref|ZP_20020247.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE65]
 gi|432791680|ref|ZP_20025774.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE78]
 gi|432797647|ref|ZP_20031675.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE79]
 gi|432800714|ref|ZP_20034704.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE84]
 gi|432804512|ref|ZP_20038458.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE91]
 gi|432812543|ref|ZP_20046392.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE101]
 gi|432813927|ref|ZP_20047738.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE115]
 gi|432819750|ref|ZP_20053464.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE118]
 gi|432825879|ref|ZP_20059536.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE123]
 gi|432830419|ref|ZP_20064028.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE135]
 gi|432833487|ref|ZP_20067035.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE136]
 gi|432837980|ref|ZP_20071473.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE140]
 gi|432842718|ref|ZP_20076139.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE141]
 gi|432873093|ref|ZP_20092791.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE147]
 gi|432879923|ref|ZP_20096743.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE154]
 gi|432884397|ref|ZP_20099353.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE158]
 gi|432897218|ref|ZP_20108214.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE192]
 gi|432910117|ref|ZP_20117244.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE190]
 gi|432932768|ref|ZP_20132622.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE184]
 gi|432945097|ref|ZP_20141392.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE196]
 gi|432953564|ref|ZP_20145863.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE197]
 gi|432959815|ref|ZP_20150101.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE202]
 gi|432966542|ref|ZP_20155462.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE203]
 gi|432977153|ref|ZP_20165978.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE209]
 gi|432994226|ref|ZP_20182843.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE218]
 gi|432998645|ref|ZP_20187185.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE223]
 gi|433011165|ref|ZP_20199570.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE229]
 gi|433012605|ref|ZP_20200988.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE104]
 gi|433017387|ref|ZP_20205658.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE105]
 gi|433022178|ref|ZP_20210204.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE106]
 gi|433027473|ref|ZP_20215349.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE109]
 gi|433031867|ref|ZP_20219682.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE112]
 gi|433041911|ref|ZP_20229446.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE117]
 gi|433046502|ref|ZP_20233934.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE120]
 gi|433051730|ref|ZP_20238968.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE122]
 gi|433056769|ref|ZP_20243856.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE124]
 gi|433061648|ref|ZP_20248614.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE125]
 gi|433066639|ref|ZP_20253483.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE128]
 gi|433071480|ref|ZP_20258182.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE129]
 gi|433086035|ref|ZP_20272439.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE137]
 gi|433090755|ref|ZP_20277063.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE138]
 gi|433114382|ref|ZP_20300198.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE153]
 gi|433118980|ref|ZP_20304694.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE157]
 gi|433123999|ref|ZP_20309590.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE160]
 gi|433128759|ref|ZP_20314239.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE163]
 gi|433133579|ref|ZP_20318962.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE166]
 gi|433138060|ref|ZP_20323347.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE167]
 gi|433147888|ref|ZP_20332954.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE174]
 gi|433157374|ref|ZP_20342250.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE177]
 gi|433162245|ref|ZP_20347010.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE179]
 gi|433167220|ref|ZP_20351896.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE180]
 gi|433172301|ref|ZP_20356861.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE232]
 gi|433176877|ref|ZP_20361344.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE82]
 gi|433181964|ref|ZP_20366267.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE85]
 gi|433192361|ref|ZP_20376383.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE90]
 gi|433197018|ref|ZP_20380947.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE94]
 gi|433201852|ref|ZP_20385664.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE95]
 gi|433206581|ref|ZP_20390282.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE97]
 gi|433211361|ref|ZP_20394976.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE99]
 gi|433324505|ref|ZP_20401792.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli J96]
 gi|442590109|ref|ZP_21008893.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli
           O10:K5(L):H4 str. ATCC 23506]
 gi|442596454|ref|ZP_21014265.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli
           O5:K4(L):H4 str. ATCC 23502]
 gi|442606698|ref|ZP_21021493.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli Nissle
           1917]
 gi|443616456|ref|YP_007380312.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli APEC
           O78]
 gi|444922747|ref|ZP_21242470.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           09BKT078844]
 gi|444929069|ref|ZP_21248223.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0814]
 gi|444934419|ref|ZP_21253363.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0815]
 gi|444951145|ref|ZP_21269371.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0848]
 gi|444956599|ref|ZP_21274601.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1753]
 gi|444961933|ref|ZP_21279687.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1775]
 gi|444967634|ref|ZP_21285111.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1793]
 gi|444973136|ref|ZP_21290419.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1805]
 gi|444978675|ref|ZP_21295673.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli ATCC
           700728]
 gi|444983970|ref|ZP_21300840.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA11]
 gi|444989213|ref|ZP_21305955.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA19]
 gi|444994567|ref|ZP_21311164.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA13]
 gi|445000063|ref|ZP_21316527.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA2]
 gi|445005519|ref|ZP_21321860.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA47]
 gi|445010692|ref|ZP_21326886.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA48]
 gi|445016474|ref|ZP_21332525.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA8]
 gi|445021922|ref|ZP_21337845.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 7.1982]
 gi|445027163|ref|ZP_21342943.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1781]
 gi|445032658|ref|ZP_21348284.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1762]
 gi|445038351|ref|ZP_21353822.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA35]
 gi|445043566|ref|ZP_21358906.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.4880]
 gi|445049138|ref|ZP_21364309.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.0083]
 gi|445054788|ref|ZP_21369741.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0670]
 gi|450185734|ref|ZP_21889204.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli SEPT362]
 gi|450211052|ref|ZP_21894191.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O08]
 gi|450239646|ref|ZP_21899073.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli S17]
 gi|452969091|ref|ZP_21967318.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. EC4009]
 gi|78099991|sp|P0ABJ0.1|CYOB_ECO57 RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase chain A; AltName:
           Full=Ubiquinol oxidase polypeptide I
 gi|78099992|sp|P0ABI9.1|CYOB_ECOL6 RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase chain A; AltName:
           Full=Ubiquinol oxidase polypeptide I
 gi|78099993|sp|P0ABI8.1|CYOB_ECOLI RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase chain A; AltName:
           Full=Ubiquinol oxidase polypeptide I
 gi|11514517|pdb|1FFT|A Chain A, The Structure Of Ubiquinol Oxidase From Escherichia Coli
 gi|11514521|pdb|1FFT|F Chain F, The Structure Of Ubiquinol Oxidase From Escherichia Coli
 gi|12513290|gb|AAG54781.1|AE005222_6 cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. EDL933]
 gi|26106835|gb|AAN79020.1|AE016756_203 Ubiquinol oxidase polypeptide I [Escherichia coli CFT073]
 gi|145653|gb|AAA23632.1| cytochrome o ubiquinol oxidase B subunit I [Escherichia coli]
 gi|1773115|gb|AAB40187.1| cytochrome o ubiquinol oxidase [Escherichia coli]
 gi|1786634|gb|AAC73534.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13359942|dbj|BAB33908.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. Sakai]
 gi|73854483|gb|AAZ87190.1| cytochrome o ubiquinol oxidase subunit I [Shigella sonnei Ss046]
 gi|85674571|dbj|BAE76211.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str. K12
           substr. W3110]
 gi|91071075|gb|ABE05956.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli UTI89]
 gi|115511815|gb|ABI99889.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli APEC O1]
 gi|157065636|gb|ABV04891.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli HS]
 gi|157077677|gb|ABV17385.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           E24377A]
 gi|169756125|gb|ACA78824.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli ATCC
           8739]
 gi|169887852|gb|ACB01559.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170521262|gb|ACB19440.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           SMS-3-5]
 gi|187768288|gb|EDU32132.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4196]
 gi|188015878|gb|EDU54000.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4113]
 gi|188487545|gb|EDU62648.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 53638]
 gi|188999367|gb|EDU68353.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4076]
 gi|189355977|gb|EDU74396.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4401]
 gi|189362501|gb|EDU80920.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4486]
 gi|189367978|gb|EDU86394.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4501]
 gi|189373735|gb|EDU92151.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC869]
 gi|189377367|gb|EDU95783.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC508]
 gi|192927139|gb|EDV81760.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli E22]
 gi|192957960|gb|EDV88402.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           E110019]
 gi|194413123|gb|EDX29410.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli B171]
 gi|194419233|gb|EDX35316.1| cytochrome o ubiquinol oxidase, subunit I [Shigella dysenteriae
           1012]
 gi|194422203|gb|EDX38205.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 101-1]
 gi|208726207|gb|EDZ75808.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4206]
 gi|208732165|gb|EDZ80853.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4045]
 gi|208737450|gb|EDZ85134.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4042]
 gi|209159774|gb|ACI37207.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. EC4115]
 gi|209743914|gb|ACI70264.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|209743916|gb|ACI70265.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|209743918|gb|ACI70266.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|209743920|gb|ACI70267.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|209743922|gb|ACI70268.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|209910906|dbj|BAG75980.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli SE11]
 gi|215263584|emb|CAS07914.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O127:H6
           str. E2348/69]
 gi|217321687|gb|EEC30111.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli O157:H7
           str. TW14588]
 gi|218350626|emb|CAU96318.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 55989]
 gi|218357442|emb|CAQ90081.1| cytochrome o ubiquinol oxidase subunit I [Escherichia fergusonii
           ATCC 35469]
 gi|218359765|emb|CAQ97306.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli IAI1]
 gi|218364109|emb|CAR01774.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli S88]
 gi|218368643|emb|CAR16382.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli IAI39]
 gi|218425858|emb|CAR06664.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli ED1a]
 gi|218430811|emb|CAR11685.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli UMN026]
 gi|222032226|emb|CAP74965.1| Ubiquinol oxidase subunit 1 [Escherichia coli LF82]
 gi|226898785|gb|EEH85044.1| cytochrome o ubiquinol oxidase subunit I [Escherichia sp.
           3_2_53FAA]
 gi|227838646|gb|EEJ49112.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 83972]
 gi|238860707|gb|ACR62705.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli BW2952]
 gi|242376212|emb|CAQ30903.1| cytochrome bo terminal oxidase subunit I, subunit of cytochrome bo
           terminal oxidase [Escherichia coli BL21(DE3)]
 gi|253325625|gb|ACT30227.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972401|gb|ACT38072.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli B str.
           REL606]
 gi|253976611|gb|ACT42281.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           BL21(DE3)]
 gi|254591015|gb|ACT70376.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. TW14359]
 gi|257752303|dbj|BAI23805.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. 11368]
 gi|257757779|dbj|BAI29276.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O103:H2
           str. 12009]
 gi|257762948|dbj|BAI34443.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H-
           str. 11128]
 gi|260450382|gb|ACX40804.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DH1]
 gi|284920241|emb|CBG33300.1| cytochrome o ubiquinol oxidase subunit 1 [Escherichia coli 042]
 gi|290761211|gb|ADD55172.1| Ubiquinol oxidase subunit 1 (Ubiquinol oxidase polypeptide I)
           (Cytochrome o subunit 1) (Oxidase BO(3) subunit 1)
           [Escherichia coli O55:H7 str. CB9615]
 gi|291325029|gb|EFE64444.1| cytochrome o ubiquinol oxidase [Escherichia coli B088]
 gi|291429404|gb|EFF02424.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli
           FVEC1412]
 gi|291433744|gb|EFF06717.1| cytochrome o ubiquinol oxidase [Escherichia coli B185]
 gi|291471758|gb|EFF14241.1| cytochrome o ubiquinol oxidase [Escherichia coli B354]
 gi|294489747|gb|ADE88503.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           IHE3034]
 gi|298280276|gb|EFI21780.1| ubiquinol oxidase subunit 1 [Escherichia coli FVEC1302]
 gi|300355980|gb|EFJ71850.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           198-1]
 gi|300397459|gb|EFJ80997.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           69-1]
 gi|300404599|gb|EFJ88137.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           84-1]
 gi|300407568|gb|EFJ91106.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           45-1]
 gi|300419609|gb|EFK02920.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           182-1]
 gi|300457876|gb|EFK21369.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           21-1]
 gi|300461841|gb|EFK25334.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           187-1]
 gi|300527111|gb|EFK48180.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           119-7]
 gi|300529131|gb|EFK50193.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           107-1]
 gi|300843076|gb|EFK70836.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           124-1]
 gi|300843364|gb|EFK71124.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           78-1]
 gi|301074499|gb|EFK89305.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           146-1]
 gi|306907693|gb|EFN38195.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli W]
 gi|307552337|gb|ADN45112.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli ABU
           83972]
 gi|307628100|gb|ADN72404.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli UM146]
 gi|308121492|gb|EFO58754.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           145-7]
 gi|309700692|emb|CBI99988.1| cytochrome o ubiquinol oxidase subunit 1 [Escherichia coli ETEC
           H10407]
 gi|310337175|gb|EFQ02313.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           1827-70]
 gi|312945008|gb|ADR25835.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315059711|gb|ADT74038.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli W]
 gi|315135113|dbj|BAJ42272.1| ubiquinol oxidase subunit [Escherichia coli DH1]
 gi|315256256|gb|EFU36224.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           85-1]
 gi|315289854|gb|EFU49244.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           110-3]
 gi|315294190|gb|EFU53541.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           153-1]
 gi|315299553|gb|EFU58801.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           16-3]
 gi|315616629|gb|EFU97246.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3431]
 gi|320173751|gb|EFW48934.1| Cytochrome O ubiquinol oxidase subunit I [Shigella dysenteriae CDC
           74-1112]
 gi|320181587|gb|EFW56502.1| Cytochrome O ubiquinol oxidase subunit I [Shigella boydii ATCC
           9905]
 gi|320192845|gb|EFW67485.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. EC1212]
 gi|320201675|gb|EFW76251.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli EC4100B]
 gi|320638425|gb|EFX08139.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. G5101]
 gi|320643805|gb|EFX12928.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H-
           str. 493-89]
 gi|320649156|gb|EFX17734.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H-
           str. H 2687]
 gi|320656049|gb|EFX23965.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320661199|gb|EFX28630.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320665175|gb|EFX32268.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. LSU-61]
 gi|323160459|gb|EFZ46407.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           E128010]
 gi|323170516|gb|EFZ56166.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli LT-68]
 gi|323178301|gb|EFZ63879.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli OK1180]
 gi|323184739|gb|EFZ70110.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli OK1357]
 gi|323379724|gb|ADX51992.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli KO11FL]
 gi|323938616|gb|EGB34865.1| cytochrome o ubiquinol oxidase [Escherichia coli E1520]
 gi|323943237|gb|EGB39393.1| cytochrome o ubiquinol oxidase [Escherichia coli E482]
 gi|323945335|gb|EGB41391.1| cytochrome o ubiquinol oxidase [Escherichia coli H120]
 gi|323952957|gb|EGB48825.1| cytochrome o ubiquinol oxidase [Escherichia coli H252]
 gi|323958624|gb|EGB54327.1| cytochrome o ubiquinol oxidase [Escherichia coli H263]
 gi|323963420|gb|EGB58982.1| cytochrome o ubiquinol oxidase [Escherichia coli H489]
 gi|323965117|gb|EGB60576.1| cytochrome o ubiquinol oxidase [Escherichia coli M863]
 gi|323972284|gb|EGB67494.1| cytochrome o ubiquinol oxidase [Escherichia coli TA007]
 gi|323976085|gb|EGB71178.1| cytochrome o ubiquinol oxidase [Escherichia coli TW10509]
 gi|324010061|gb|EGB79280.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           57-2]
 gi|324016709|gb|EGB85928.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           117-3]
 gi|324114658|gb|EGC08626.1| cytochrome o ubiquinol oxidase [Escherichia fergusonii B253]
 gi|324116918|gb|EGC10831.1| cytochrome o ubiquinol oxidase [Escherichia coli E1167]
 gi|325498278|gb|EGC96137.1| cytochrome o ubiquinol oxidase subunit I [Escherichia fergusonii
           ECD227]
 gi|326341193|gb|EGD64985.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. 1044]
 gi|326346032|gb|EGD69771.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli O157:H7
           str. 1125]
 gi|327254757|gb|EGE66373.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_7v]
 gi|331037747|gb|EGI09967.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli H736]
 gi|331054734|gb|EGI26743.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA206]
 gi|331060232|gb|EGI32196.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA143]
 gi|331066009|gb|EGI37893.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA271]
 gi|331070966|gb|EGI42325.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TA280]
 gi|331076160|gb|EGI47442.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli H591]
 gi|331081027|gb|EGI52192.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli H299]
 gi|332085658|gb|EGI90822.1| cytochrome o ubiquinol oxidase, subunit I [Shigella dysenteriae
           155-74]
 gi|332103933|gb|EGJ07279.1| cytochrome o ubiquinol oxidase subunit I [Shigella sp. D9]
 gi|332341794|gb|AEE55128.1| cytochrome O ubiquinol oxidase subunit I CyoB [Escherichia coli
           UMNK88]
 gi|338771506|gb|EGP26246.1| Cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PCN033]
 gi|339413379|gb|AEJ55051.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli UMNF18]
 gi|340735690|gb|EGR64746.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 01-09591]
 gi|340741495|gb|EGR75641.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. LB226692]
 gi|341921025|gb|EGT70629.1| cyoB [Escherichia coli O104:H4 str. C227-11]
 gi|342362483|gb|EGU26601.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli XH140A]
 gi|342930633|gb|EGU99355.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           79-10]
 gi|344193764|gb|EGV47842.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli XH001]
 gi|345341450|gb|EGW73855.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_C165-02]
 gi|345344074|gb|EGW76450.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_B2F1]
 gi|345345285|gb|EGW77631.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           2534-86]
 gi|345354056|gb|EGW86283.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_94C]
 gi|345361722|gb|EGW93880.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3030-1]
 gi|345365635|gb|EGW97742.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_DG131-3]
 gi|345377676|gb|EGX09607.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_MHI813]
 gi|345386274|gb|EGX16109.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_H.1.8]
 gi|345391225|gb|EGX21019.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_S1191]
 gi|345395474|gb|EGX25218.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TX1999]
 gi|349736539|gb|AEQ11245.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O7:K1
           str. CE10]
 gi|354858257|gb|EHF18708.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 04-8351]
 gi|354860133|gb|EHF20580.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. C227-11]
 gi|354866829|gb|EHF27252.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. C236-11]
 gi|354877165|gb|EHF37525.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 09-7901]
 gi|354879472|gb|EHF39810.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4404]
 gi|354884059|gb|EHF44373.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-3677]
 gi|354885860|gb|EHF46152.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4522]
 gi|354888927|gb|EHF49181.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4623]
 gi|354901528|gb|EHF61655.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C1]
 gi|354905759|gb|EHF65842.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C2]
 gi|354908266|gb|EHF68322.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C3]
 gi|354918738|gb|EHF78694.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C5]
 gi|354922426|gb|EHF82341.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str. 11-4632
           C4]
 gi|355353080|gb|EHG02252.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           cloneA_i1]
 gi|355418917|gb|AER83114.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           'clone D i2']
 gi|355423837|gb|AER88033.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           'clone D i14']
 gi|359331191|dbj|BAL37638.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli str.
           K-12 substr. MDS42]
 gi|371594116|gb|EHN82988.1| ubiquinol oxidase subunit 1 [Escherichia coli H494]
 gi|371595512|gb|EHN84361.1| ubiquinol oxidase subunit 1 [Escherichia coli TA124]
 gi|371604305|gb|EHN92934.1| ubiquinol oxidase subunit 1 [Escherichia coli B093]
 gi|371611424|gb|EHN99946.1| ubiquinol oxidase subunit 1 [Escherichia coli H397]
 gi|371612958|gb|EHO01461.1| ubiquinol oxidase subunit 1 [Escherichia coli E101]
 gi|373248392|gb|EHP67822.1| ubiquinol oxidase subunit 1 [Escherichia coli 4_1_47FAA]
 gi|374357441|gb|AEZ39148.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O55:H7
           str. RM12579]
 gi|375323609|gb|EHS69314.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O157:H43
           str. T22]
 gi|377850921|gb|EHU15876.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1C]
 gi|377854076|gb|EHU18966.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1B]
 gi|377862752|gb|EHU27559.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1D]
 gi|377866865|gb|EHU31629.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1E]
 gi|377868220|gb|EHU32964.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2A]
 gi|377883922|gb|EHU48440.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2D]
 gi|377885895|gb|EHU50386.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2C]
 gi|377898417|gb|EHU62777.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2E]
 gi|377900699|gb|EHU65031.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3A]
 gi|377902527|gb|EHU66831.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3B]
 gi|377914352|gb|EHU78475.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3C]
 gi|377918744|gb|EHU82791.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3D]
 gi|377920832|gb|EHU84847.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3E]
 gi|377932373|gb|EHU96227.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC3F]
 gi|377934468|gb|EHU98299.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4A]
 gi|377940599|gb|EHV04348.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4B]
 gi|377950662|gb|EHV14289.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4C]
 gi|377951206|gb|EHV14825.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4D]
 gi|377955439|gb|EHV18995.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4E]
 gi|377966075|gb|EHV29488.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5A]
 gi|377967388|gb|EHV30794.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC4F]
 gi|377973501|gb|EHV36841.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5B]
 gi|377981464|gb|EHV44723.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5D]
 gi|377981838|gb|EHV45096.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5C]
 gi|377988571|gb|EHV51749.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC5E]
 gi|378000294|gb|EHV63368.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6A]
 gi|378001456|gb|EHV64515.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6B]
 gi|378003846|gb|EHV66886.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6C]
 gi|378014244|gb|EHV77150.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6D]
 gi|378017169|gb|EHV80044.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC6E]
 gi|378018831|gb|EHV81677.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7A]
 gi|378027880|gb|EHV90505.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7C]
 gi|378032395|gb|EHV94976.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7D]
 gi|378037753|gb|EHW00276.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7B]
 gi|378042328|gb|EHW04777.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC7E]
 gi|378052748|gb|EHW15050.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8A]
 gi|378057110|gb|EHW19345.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8B]
 gi|378063086|gb|EHW25256.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8C]
 gi|378069182|gb|EHW31277.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8D]
 gi|378072748|gb|EHW34805.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC8E]
 gi|378081861|gb|EHW43809.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9A]
 gi|378082802|gb|EHW44745.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9B]
 gi|378090500|gb|EHW52337.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9C]
 gi|378095195|gb|EHW56985.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9D]
 gi|378102379|gb|EHW64056.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC9E]
 gi|378107892|gb|EHW69510.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10A]
 gi|378116915|gb|EHW78433.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10B]
 gi|378119358|gb|EHW80853.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10C]
 gi|378121698|gb|EHW83149.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10D]
 gi|378134740|gb|EHW96061.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10E]
 gi|378136529|gb|EHW97823.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11A]
 gi|378139977|gb|EHX01207.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC10F]
 gi|378147344|gb|EHX08492.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11B]
 gi|378157250|gb|EHX18292.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11C]
 gi|378175095|gb|EHX35914.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12A]
 gi|378175601|gb|EHX36417.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12B]
 gi|378177094|gb|EHX37895.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12C]
 gi|378190577|gb|EHX51161.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13A]
 gi|378191137|gb|EHX51713.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12E]
 gi|378191949|gb|EHX52523.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC12D]
 gi|378204173|gb|EHX64589.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13B]
 gi|378208322|gb|EHX68706.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13D]
 gi|378209331|gb|EHX69705.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13C]
 gi|378219784|gb|EHX80051.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC13E]
 gi|378221920|gb|EHX82162.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14A]
 gi|378226313|gb|EHX86500.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14B]
 gi|378234462|gb|EHX94540.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14C]
 gi|378237151|gb|EHX97178.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC14D]
 gi|378244649|gb|EHY04591.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15A]
 gi|378252201|gb|EHY12095.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15C]
 gi|378257931|gb|EHY17767.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15D]
 gi|378261227|gb|EHY21022.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC15E]
 gi|380349362|gb|EIA37634.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli SCI-07]
 gi|383101816|gb|AFG39325.1| Ubiquinol oxidase subunit 1 [Escherichia coli P12b]
 gi|383394290|gb|AFH19248.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KO11FL]
 gi|383403925|gb|AFH10168.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli W]
 gi|384377978|gb|EIE35870.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli J53]
 gi|385155309|gb|EIF17313.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O32:H37
           str. P4]
 gi|385539918|gb|EIF86745.1| ubiquinol oxidase subunit 1 [Escherichia coli M919]
 gi|385704850|gb|EIG41922.1| ubiquinol oxidase subunit 1 [Escherichia coli B799]
 gi|385712902|gb|EIG49841.1| ubiquinol oxidase subunit 1 [Escherichia coli H730]
 gi|386123456|gb|EIG72052.1| ubiquinol oxidase subunit 1 [Escherichia sp. 4_1_40B]
 gi|386141630|gb|EIG82780.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 1.2741]
 gi|386151251|gb|EIH02540.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5.0588]
 gi|386156979|gb|EIH13321.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0259]
 gi|386164690|gb|EIH26476.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 1.2264]
 gi|386169518|gb|EIH36026.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0497]
 gi|386170575|gb|EIH42628.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0741]
 gi|386179065|gb|EIH56544.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.2608]
 gi|386186511|gb|EIH69227.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           93.0624]
 gi|386192016|gb|EIH80757.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 4.0522]
 gi|386193207|gb|EIH87506.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli JB1-95]
 gi|386200426|gb|EIH99417.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 96.154]
 gi|386206692|gb|EII11198.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5.0959]
 gi|386209803|gb|EII20290.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 9.0111]
 gi|386216567|gb|EII33056.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 4.0967]
 gi|386225718|gb|EII48043.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 2.3916]
 gi|386230204|gb|EII57559.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.3884]
 gi|386236941|gb|EII68913.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 2.4168]
 gi|386242157|gb|EII79070.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.2303]
 gi|386242476|gb|EII84211.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3003]
 gi|386247130|gb|EII93303.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW07793]
 gi|386252719|gb|EIJ02410.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli B41]
 gi|386257080|gb|EIJ12571.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 900105
           (10e)]
 gi|386794485|gb|AFJ27519.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli
           Xuzhou21]
 gi|388341945|gb|EIL08022.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9534]
 gi|388345214|gb|EIL11000.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O103:H25
           str. CVM9340]
 gi|388346446|gb|EIL12163.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O103:H2
           str. CVM9450]
 gi|388360319|gb|EIL24540.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9570]
 gi|388361241|gb|EIL25375.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9545]
 gi|388368628|gb|EIL32253.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9574]
 gi|388377641|gb|EIL40436.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM9942]
 gi|388379323|gb|EIL41993.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10026]
 gi|388383829|gb|EIL45577.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KD1]
 gi|388395253|gb|EIL56477.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli KD2]
 gi|388398334|gb|EIL59254.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 576-1]
 gi|388400835|gb|EIL61527.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 75]
 gi|388406299|gb|EIL66705.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 541-1]
 gi|388415168|gb|EIL75101.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli HM605]
 gi|388420463|gb|EIL80155.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli CUMT8]
 gi|390650898|gb|EIN29271.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1996]
 gi|390652863|gb|EIN31035.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA517]
 gi|390653344|gb|EIN31491.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA505]
 gi|390669788|gb|EIN46381.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 93-001]
 gi|390672999|gb|EIN49252.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1990]
 gi|390674124|gb|EIN50331.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1985]
 gi|390688653|gb|EIN63685.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA3]
 gi|390692162|gb|EIN66860.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA9]
 gi|390693108|gb|EIN67748.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA5]
 gi|390708487|gb|EIN81707.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA10]
 gi|390710353|gb|EIN83375.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA15]
 gi|390713039|gb|EIN85982.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA14]
 gi|390720422|gb|EIN93134.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA22]
 gi|390733837|gb|EIO05398.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA25]
 gi|390733992|gb|EIO05551.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA24]
 gi|390736967|gb|EIO08282.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA28]
 gi|390752254|gb|EIO22100.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA31]
 gi|390752746|gb|EIO22552.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA32]
 gi|390755171|gb|EIO24719.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA33]
 gi|390762413|gb|EIO31671.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA40]
 gi|390776235|gb|EIO44186.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA41]
 gi|390778683|gb|EIO46440.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA42]
 gi|390784209|gb|EIO51782.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA39]
 gi|390785573|gb|EIO53115.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW06591]
 gi|390794937|gb|EIO62222.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW10246]
 gi|390801796|gb|EIO68847.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW11039]
 gi|390810425|gb|EIO77186.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW07945]
 gi|390819448|gb|EIO85781.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW10119]
 gi|390823042|gb|EIO89114.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW09098]
 gi|390837269|gb|EIP01700.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4203]
 gi|390840077|gb|EIP04136.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4196]
 gi|390842454|gb|EIP06302.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW09195]
 gi|390855697|gb|EIP18379.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW14301]
 gi|390860074|gb|EIP22401.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4421]
 gi|390860501|gb|EIP22815.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW14313]
 gi|390871765|gb|EIP33145.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4422]
 gi|390876367|gb|EIP37353.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4013]
 gi|390886135|gb|EIP46273.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4402]
 gi|390888108|gb|EIP48004.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4439]
 gi|390894951|gb|EIP54441.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4436]
 gi|390904215|gb|EIP63231.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1738]
 gi|390910639|gb|EIP69370.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4437]
 gi|390911941|gb|EIP70622.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1734]
 gi|390915097|gb|EIP73615.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC4448]
 gi|390925012|gb|EIP82748.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1863]
 gi|390926182|gb|EIP83776.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1845]
 gi|391288791|gb|EIQ47290.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 3226-85]
 gi|391296937|gb|EIQ55013.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 4822-66]
 gi|391309577|gb|EIQ67245.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           EPECa12]
 gi|394390760|gb|EJE67720.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9602]
 gi|394394607|gb|EJE71170.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10224]
 gi|394399946|gb|EJE75907.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CVM9634]
 gi|394405890|gb|EJE80987.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9553]
 gi|394409061|gb|EJE83648.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CVM9455]
 gi|394412000|gb|EJE86180.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10021]
 gi|394431095|gb|EJF03338.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM10030]
 gi|394433358|gb|EJF05390.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CVM9952]
 gi|397786913|gb|EJK97744.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           STEC_O31]
 gi|397903007|gb|EJL19314.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei str.
           Moseley]
 gi|404292792|gb|EJZ49583.1| ubiquinol oxidase subunit 1 [Escherichia sp. 1_1_43]
 gi|404341881|gb|EJZ68283.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           1485-80]
 gi|406779105|gb|AFS58529.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 2009EL-2050]
 gi|407055686|gb|AFS75737.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 2011C-3493]
 gi|407063915|gb|AFS84962.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O104:H4
           str. 2009EL-2071]
 gi|408072541|gb|EKH06862.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA7]
 gi|408076050|gb|EKH10279.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK920]
 gi|408086063|gb|EKH19605.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA34]
 gi|408090659|gb|EKH23930.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA506]
 gi|408095704|gb|EKH28669.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli FDA507]
 gi|408110220|gb|EKH42047.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK1999]
 gi|408122375|gb|EKH53237.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli NE1487]
 gi|408130425|gb|EKH60573.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli NE037]
 gi|408141755|gb|EKH71210.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA4]
 gi|408150516|gb|EKH79098.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA23]
 gi|408153391|gb|EKH81786.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA49]
 gi|408158618|gb|EKH86735.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA45]
 gi|408167174|gb|EKH94701.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli TT12B]
 gi|408172660|gb|EKH99723.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MA6]
 gi|408174732|gb|EKI01696.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5905]
 gi|408187049|gb|EKI13030.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli CB7326]
 gi|408192233|gb|EKI17810.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           EC96038]
 gi|408192331|gb|EKI17907.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5412]
 gi|408198902|gb|EKI24113.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW15901]
 gi|408206218|gb|EKI31030.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           TW00353]
 gi|408207190|gb|EKI31944.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           ARS4.2123]
 gi|408218922|gb|EKI43104.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3006]
 gi|408221630|gb|EKI45563.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 07798]
 gi|408232188|gb|EKI55439.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli N1]
 gi|408233167|gb|EKI56302.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA38]
 gi|408239271|gb|EKI62024.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1735]
 gi|408249206|gb|EKI71158.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1736]
 gi|408253451|gb|EKI75045.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1737]
 gi|408259565|gb|EKI80724.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1846]
 gi|408268448|gb|EKI88804.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1847]
 gi|408270223|gb|EKI90432.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1848]
 gi|408278934|gb|EKI98601.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1849]
 gi|408285362|gb|EKJ04392.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1850]
 gi|408288138|gb|EKJ06976.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1856]
 gi|408300609|gb|EKJ18294.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1862]
 gi|408301161|gb|EKJ18815.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1864]
 gi|408318194|gb|EKJ34409.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1868]
 gi|408318829|gb|EKJ35031.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1866]
 gi|408331647|gb|EKJ46791.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1869]
 gi|408337272|gb|EKJ52008.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli NE098]
 gi|408338652|gb|EKJ53298.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli EC1870]
 gi|408347905|gb|EKJ62048.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 0.1288]
 gi|408350683|gb|EKJ64531.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           FRIK523]
 gi|408353286|gb|EKJ66808.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 0.1304]
 gi|408457128|gb|EKJ80929.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli AD30]
 gi|408559084|gb|EKK35427.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 5.2239]
 gi|408560341|gb|EKK36605.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 6.0172]
 gi|408573149|gb|EKK49008.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0566]
 gi|408573662|gb|EKK49492.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0569]
 gi|408585470|gb|EKK60337.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0586]
 gi|408590496|gb|EKK64971.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.2524]
 gi|408592311|gb|EKK66703.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           10.0833]
 gi|408605954|gb|EKK79434.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 8.0416]
 gi|408611145|gb|EKK84507.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           88.0221]
 gi|408617320|gb|EKK90442.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           10.0821]
 gi|412961680|emb|CCK45587.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli chi7122]
 gi|412968295|emb|CCJ42912.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli]
 gi|421934157|gb|EKT91934.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H11
           str. CFSAN001630]
 gi|421945325|gb|EKU02542.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O26:H11
           str. CFSAN001629]
 gi|421946787|gb|EKU03901.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O111:H8
           str. CFSAN001632]
 gi|427214743|gb|EKV84015.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           88.1042]
 gi|427233979|gb|EKW01688.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           90.2281]
 gi|427234219|gb|EKW01918.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           90.0039]
 gi|427236310|gb|EKW03891.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           90.0091]
 gi|427251574|gb|EKW18137.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           93.0056]
 gi|427253034|gb|EKW19477.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           93.0055]
 gi|427254449|gb|EKW20810.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           94.0618]
 gi|427270567|gb|EKW35445.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.0943]
 gi|427271055|gb|EKW35904.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.0183]
 gi|427276288|gb|EKW40862.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.1288]
 gi|427286610|gb|EKW50448.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0428]
 gi|427292263|gb|EKW55617.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0427]
 gi|427293887|gb|EKW57107.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0939]
 gi|427304905|gb|EKW67525.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0003]
 gi|427306545|gb|EKW69064.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0932]
 gi|427310994|gb|EKW73214.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0107]
 gi|427322528|gb|EKW84159.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0007]
 gi|427334462|gb|EKW95531.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0713]
 gi|427334765|gb|EKW95833.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0678]
 gi|429260197|gb|EKY43790.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           96.0109]
 gi|429261856|gb|EKY45248.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           97.0010]
 gi|429351540|gb|EKY88260.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02030]
 gi|429352243|gb|EKY88959.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02033-1]
 gi|429353001|gb|EKY89710.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02092]
 gi|429366914|gb|EKZ03515.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02093]
 gi|429367825|gb|EKZ04417.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02281]
 gi|429370320|gb|EKZ06886.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02318]
 gi|429382707|gb|EKZ19171.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-02913]
 gi|429384940|gb|EKZ21394.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-03943]
 gi|429385463|gb|EKZ21916.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-03439]
 gi|429397156|gb|EKZ33503.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           11-04080]
 gi|429399384|gb|EKZ35705.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-9450]
 gi|429399692|gb|EKZ36012.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-9990]
 gi|429410446|gb|EKZ46668.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4984]
 gi|429412346|gb|EKZ48543.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4986]
 gi|429419331|gb|EKZ55469.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4987]
 gi|429427890|gb|EKZ63970.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-5603]
 gi|429434734|gb|EKZ70758.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-4988]
 gi|429435558|gb|EKZ71576.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-5604]
 gi|429440099|gb|EKZ76078.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec12-0465]
 gi|429444699|gb|EKZ80644.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-6006]
 gi|429451004|gb|EKZ86896.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec12-0466]
 gi|429456496|gb|EKZ92341.1| ubiquinol oxidase subunit 1 [Escherichia coli O104:H4 str.
           Ec11-9941]
 gi|430879585|gb|ELC02916.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE4]
 gi|430880727|gb|ELC04002.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE2]
 gi|430888876|gb|ELC11547.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE10]
 gi|430891417|gb|ELC13953.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE5]
 gi|430901418|gb|ELC23386.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE12]
 gi|430922716|gb|ELC43463.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE21]
 gi|430929263|gb|ELC49774.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE26]
 gi|430932797|gb|ELC53216.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE28]
 gi|430938436|gb|ELC58677.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE39]
 gi|430943759|gb|ELC63865.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE44]
 gi|430947415|gb|ELC67113.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE181]
 gi|430956169|gb|ELC74845.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE187]
 gi|430966655|gb|ELC84018.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE188]
 gi|430969554|gb|ELC86658.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE189]
 gi|430974583|gb|ELC91506.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE193]
 gi|430976243|gb|ELC93118.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE191]
 gi|430985231|gb|ELD01837.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE201]
 gi|430992486|gb|ELD08857.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE204]
 gi|430997194|gb|ELD13461.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE205]
 gi|431010391|gb|ELD24739.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE208]
 gi|431010809|gb|ELD25153.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE210]
 gi|431013133|gb|ELD26867.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE213]
 gi|431018561|gb|ELD31992.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE212]
 gi|431027816|gb|ELD40861.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE214]
 gi|431042141|gb|ELD52633.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE220]
 gi|431045622|gb|ELD55852.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE228]
 gi|431054704|gb|ELD64273.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE230]
 gi|431057190|gb|ELD66660.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE233]
 gi|431064539|gb|ELD73406.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE235]
 gi|431078324|gb|ELD85382.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE236]
 gi|431085324|gb|ELD91437.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE237]
 gi|431087071|gb|ELD93076.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE47]
 gi|431099574|gb|ELE04594.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE51]
 gi|431103103|gb|ELE07773.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE53]
 gi|431110764|gb|ELE14681.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE55]
 gi|431119558|gb|ELE22557.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE57]
 gi|431124010|gb|ELE26664.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE58]
 gi|431132994|gb|ELE34992.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE60]
 gi|431133983|gb|ELE35949.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE62]
 gi|431140538|gb|ELE42304.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE67]
 gi|431143995|gb|ELE45703.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE66]
 gi|431158145|gb|ELE58766.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE75]
 gi|431162893|gb|ELE63333.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE76]
 gi|431165150|gb|ELE65508.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE77]
 gi|431174027|gb|ELE74088.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE81]
 gi|431174520|gb|ELE74565.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE80]
 gi|431185125|gb|ELE84855.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE83]
 gi|431193330|gb|ELE92666.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE87]
 gi|431204687|gb|ELF03245.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE116]
 gi|431207355|gb|ELF05612.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE142]
 gi|431213753|gb|ELF11609.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE119]
 gi|431225046|gb|ELF22255.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE143]
 gi|431225235|gb|ELF22440.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE156]
 gi|431230809|gb|ELF26579.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE161]
 gi|431247134|gb|ELF41376.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE171]
 gi|431267047|gb|ELF58580.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE9]
 gi|431278559|gb|ELF69549.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE45]
 gi|431286845|gb|ELF77665.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE42]
 gi|431300625|gb|ELF90176.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE29]
 gi|431305609|gb|ELF93930.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE22]
 gi|431312001|gb|ELG00149.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE46]
 gi|431313374|gb|ELG01347.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE48]
 gi|431319272|gb|ELG06956.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE50]
 gi|431320732|gb|ELG08362.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE54]
 gi|431330857|gb|ELG18121.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE59]
 gi|431332051|gb|ELG19294.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE63]
 gi|431342010|gb|ELG29006.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE65]
 gi|431342476|gb|ELG29455.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE78]
 gi|431345867|gb|ELG32781.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE79]
 gi|431351303|gb|ELG38093.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE84]
 gi|431357435|gb|ELG44102.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE101]
 gi|431357845|gb|ELG44511.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE91]
 gi|431368946|gb|ELG55177.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE115]
 gi|431370752|gb|ELG56545.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE118]
 gi|431375263|gb|ELG60607.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE123]
 gi|431380181|gb|ELG65081.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE135]
 gi|431388649|gb|ELG72372.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE136]
 gi|431391883|gb|ELG75487.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE140]
 gi|431397246|gb|ELG80702.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE141]
 gi|431405194|gb|ELG88437.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE147]
 gi|431413547|gb|ELG96312.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE154]
 gi|431419985|gb|ELH02319.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE158]
 gi|431430028|gb|ELH11862.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE192]
 gi|431447192|gb|ELH27934.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE190]
 gi|431456801|gb|ELH37144.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE184]
 gi|431463005|gb|ELH43199.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE196]
 gi|431470694|gb|ELH50591.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE197]
 gi|431475903|gb|ELH55707.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE203]
 gi|431478710|gb|ELH58455.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE202]
 gi|431482257|gb|ELH61960.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE209]
 gi|431509560|gb|ELH87809.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE218]
 gi|431514214|gb|ELH92056.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE223]
 gi|431519377|gb|ELH96829.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE229]
 gi|431535940|gb|ELI12275.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE104]
 gi|431537557|gb|ELI13674.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE105]
 gi|431541063|gb|ELI16513.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE106]
 gi|431545983|gb|ELI20626.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE109]
 gi|431560174|gb|ELI33695.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE112]
 gi|431560384|gb|ELI33898.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE117]
 gi|431572891|gb|ELI45715.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE120]
 gi|431574212|gb|ELI46994.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE124]
 gi|431575865|gb|ELI48588.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE122]
 gi|431588352|gb|ELI59637.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE125]
 gi|431591174|gb|ELI62174.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE128]
 gi|431593667|gb|ELI63959.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE129]
 gi|431610197|gb|ELI79498.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE137]
 gi|431615207|gb|ELI84337.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE138]
 gi|431636882|gb|ELJ05001.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE153]
 gi|431649329|gb|ELJ16687.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE157]
 gi|431650102|gb|ELJ17439.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE160]
 gi|431651629|gb|ELJ18868.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE163]
 gi|431663394|gb|ELJ30156.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE166]
 gi|431665029|gb|ELJ31756.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE167]
 gi|431676781|gb|ELJ42864.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE174]
 gi|431682060|gb|ELJ47829.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE177]
 gi|431692283|gb|ELJ57721.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE179]
 gi|431694175|gb|ELJ59560.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE180]
 gi|431696246|gb|ELJ61433.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE232]
 gi|431710582|gb|ELJ74956.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE82]
 gi|431711860|gb|ELJ76167.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE85]
 gi|431721837|gb|ELJ85829.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE90]
 gi|431725787|gb|ELJ89626.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE94]
 gi|431726368|gb|ELJ90178.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE95]
 gi|431733137|gb|ELJ96578.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE97]
 gi|431736016|gb|ELJ99358.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE99]
 gi|432347019|gb|ELL41483.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli J96]
 gi|441609767|emb|CCP94806.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli
           O10:K5(L):H4 str. ATCC 23506]
 gi|441655115|emb|CCQ00178.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli
           O5:K4(L):H4 str. ATCC 23502]
 gi|441712005|emb|CCQ07470.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli Nissle
           1917]
 gi|443420964|gb|AGC85868.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli APEC
           O78]
 gi|444542445|gb|ELV21803.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0814]
 gi|444550923|gb|ELV28941.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           09BKT078844]
 gi|444551790|gb|ELV29666.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0815]
 gi|444571471|gb|ELV47953.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0848]
 gi|444582356|gb|ELV58150.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1753]
 gi|444585144|gb|ELV60724.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1775]
 gi|444586115|gb|ELV61636.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1793]
 gi|444599994|gb|ELV74850.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli ATCC
           700728]
 gi|444600461|gb|ELV75297.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA11]
 gi|444608378|gb|ELV82911.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1805]
 gi|444614915|gb|ELV89140.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA13]
 gi|444615581|gb|ELV89785.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA19]
 gi|444623570|gb|ELV97490.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA2]
 gi|444632662|gb|ELW06217.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA48]
 gi|444632883|gb|ELW06432.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA47]
 gi|444637796|gb|ELW11161.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA8]
 gi|444647977|gb|ELW20933.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 7.1982]
 gi|444650082|gb|ELW22934.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1781]
 gi|444654172|gb|ELW26866.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.1762]
 gi|444663153|gb|ELW35398.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli PA35]
 gi|444667426|gb|ELW39464.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli 3.4880]
 gi|444672849|gb|ELW44535.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           95.0083]
 gi|444674572|gb|ELW46102.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli
           99.0670]
 gi|449322667|gb|EMD12650.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli O08]
 gi|449324915|gb|EMD14835.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli SEPT362]
 gi|449324959|gb|EMD14878.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli S17]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|432579108|ref|ZP_19815542.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE56]
 gi|431108810|gb|ELE12781.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE56]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNEIWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|306813103|ref|ZP_07447296.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli NC101]
 gi|432380059|ref|ZP_19623023.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE15]
 gi|432385888|ref|ZP_19628787.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE16]
 gi|432512639|ref|ZP_19749882.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE224]
 gi|432610165|ref|ZP_19846338.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE72]
 gi|432644866|ref|ZP_19880669.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE86]
 gi|432654441|ref|ZP_19890160.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE93]
 gi|432697748|ref|ZP_19932920.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE169]
 gi|432744368|ref|ZP_19979073.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE43]
 gi|432902764|ref|ZP_20112444.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE194]
 gi|432942304|ref|ZP_20139646.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE183]
 gi|432970608|ref|ZP_20159486.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE207]
 gi|432984123|ref|ZP_20172862.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE215]
 gi|433037367|ref|ZP_20224988.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE113]
 gi|433081378|ref|ZP_20267853.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE133]
 gi|433099979|ref|ZP_20286091.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE145]
 gi|433142993|ref|ZP_20328172.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE168]
 gi|433187236|ref|ZP_20371365.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE88]
 gi|305853866|gb|EFM54305.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli NC101]
 gi|430909937|gb|ELC31295.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE16]
 gi|430912038|gb|ELC33289.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE15]
 gi|431044959|gb|ELD55214.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE224]
 gi|431151478|gb|ELE52493.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE72]
 gi|431184347|gb|ELE84105.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE86]
 gi|431195626|gb|ELE94595.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE93]
 gi|431246942|gb|ELF41185.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE169]
 gi|431295822|gb|ELF85554.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE43]
 gi|431437409|gb|ELH18919.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE194]
 gi|431454772|gb|ELH35130.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE183]
 gi|431485745|gb|ELH65402.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE207]
 gi|431506260|gb|ELH84858.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE215]
 gi|431555543|gb|ELI29383.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE113]
 gi|431606023|gb|ELI75407.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE133]
 gi|431622845|gb|ELI91530.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE145]
 gi|431666681|gb|ELJ33308.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE168]
 gi|431709782|gb|ELJ74230.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE88]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|110640691|ref|YP_668419.1| cytochrome o ubiquinol oxidase subunit I [Escherichia coli 536]
 gi|300997382|ref|ZP_07181722.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           200-1]
 gi|422378063|ref|ZP_16458286.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           60-1]
 gi|432469864|ref|ZP_19711917.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE206]
 gi|432712152|ref|ZP_19947204.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE8]
 gi|433076629|ref|ZP_20263195.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE131]
 gi|110342283|gb|ABG68520.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli 536]
 gi|300304201|gb|EFJ58721.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           200-1]
 gi|324010691|gb|EGB79910.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           60-1]
 gi|430999931|gb|ELD16005.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE206]
 gi|431259667|gb|ELF52030.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE8]
 gi|431601206|gb|ELI70723.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE131]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|432859087|ref|ZP_20085261.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE146]
 gi|431408142|gb|ELG91334.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE146]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIIIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|300918188|ref|ZP_07134795.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           115-1]
 gi|432532620|ref|ZP_19769620.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE234]
 gi|300414639|gb|EFJ97949.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           115-1]
 gi|431063812|gb|ELD73026.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE234]
          Length = 663

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAALIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|415852343|ref|ZP_11528719.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 53G]
 gi|323164230|gb|EFZ50037.1| cytochrome o ubiquinol oxidase, subunit I [Shigella sonnei 53G]
          Length = 638

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 43  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 102

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 103 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 162

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 163 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 222

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 223 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 282

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 283 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 342

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 343 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 402

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 403 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 462

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 463 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 522

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 523 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 582

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 583 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 625


>gi|417688193|ref|ZP_12337439.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 5216-82]
 gi|332094586|gb|EGI99632.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 5216-82]
          Length = 663

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|331651367|ref|ZP_08352392.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli M718]
 gi|331051108|gb|EGI23160.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli M718]
          Length = 663

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRGQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|366160324|ref|ZP_09460186.1| cytochrome o ubiquinol oxidase subunit I [Escherichia sp. TW09308]
 gi|432371205|ref|ZP_19614269.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE11]
 gi|430900418|gb|ELC22437.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE11]
          Length = 663

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+Q+FTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQVFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|331645605|ref|ZP_08346709.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli M605]
 gi|386617924|ref|YP_006137504.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli NA114]
 gi|387828444|ref|YP_003348381.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli SE15]
 gi|417661005|ref|ZP_12310586.1| cytochrome O ubiquinol oxidase subunit 1 [Escherichia coli AA86]
 gi|432396305|ref|ZP_19639097.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE25]
 gi|432420541|ref|ZP_19663099.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE178]
 gi|432498675|ref|ZP_19740455.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE216]
 gi|432557448|ref|ZP_19794141.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE49]
 gi|432693215|ref|ZP_19928430.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE162]
 gi|432709262|ref|ZP_19944331.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE6]
 gi|432721994|ref|ZP_19956921.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE17]
 gi|432726540|ref|ZP_19961423.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE18]
 gi|432740227|ref|ZP_19974949.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE23]
 gi|432893047|ref|ZP_20105152.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE165]
 gi|432917563|ref|ZP_20122094.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE173]
 gi|432924868|ref|ZP_20127007.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE175]
 gi|432979935|ref|ZP_20168716.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE211]
 gi|432989536|ref|ZP_20178206.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE217]
 gi|433095298|ref|ZP_20281514.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE139]
 gi|433104566|ref|ZP_20290589.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE148]
 gi|433109683|ref|ZP_20295563.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE150]
 gi|281177601|dbj|BAI53931.1| cytochrome O ubiquinol oxidase subunit I [Escherichia coli SE15]
 gi|330910223|gb|EGH38733.1| cytochrome O ubiquinol oxidase subunit 1 [Escherichia coli AA86]
 gi|331045767|gb|EGI17893.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli M605]
 gi|333968425|gb|AEG35230.1| Cytochrome O ubiquinol oxidase subunit I [Escherichia coli NA114]
 gi|430918687|gb|ELC39688.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE25]
 gi|430947706|gb|ELC67403.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE178]
 gi|431032269|gb|ELD44980.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE216]
 gi|431094501|gb|ELE00133.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE49]
 gi|431237357|gb|ELF32357.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE162]
 gi|431252983|gb|ELF46497.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE6]
 gi|431268356|gb|ELF59830.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE17]
 gi|431276648|gb|ELF67668.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE18]
 gi|431286356|gb|ELF77182.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE23]
 gi|431425499|gb|ELH07569.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE165]
 gi|431447436|gb|ELH28168.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE173]
 gi|431449527|gb|ELH30100.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE175]
 gi|431496556|gb|ELH76139.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE211]
 gi|431498781|gb|ELH77966.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE217]
 gi|431619868|gb|ELI88765.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE139]
 gi|431631760|gb|ELJ00066.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE150]
 gi|431634590|gb|ELJ02831.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE148]
          Length = 663

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQIYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|433003957|ref|ZP_20192395.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE227]
 gi|433152575|ref|ZP_20337545.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE176]
 gi|431517278|gb|ELH94800.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE227]
 gi|431678631|gb|ELJ44627.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE176]
          Length = 663

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G +LV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVLLVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|170767688|ref|ZP_02902141.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia albertii
           TW07627]
 gi|170123176|gb|EDS92107.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia albertii
           TW07627]
          Length = 663

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+Q+FTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQVFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L II F    I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIIGFAGMSITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|417754225|ref|ZP_12402320.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2B]
 gi|418995455|ref|ZP_13543069.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1A]
 gi|377848845|gb|EHU13821.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC1A]
 gi|377879171|gb|EHU43744.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC2B]
          Length = 663

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N ++
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|420324036|ref|ZP_14825822.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           CCH060]
 gi|391256926|gb|EIQ16048.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           CCH060]
          Length = 646

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 51  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 171 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 231 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 411 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+ SSPP
Sbjct: 471 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWANSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 531 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 591 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 633


>gi|317492921|ref|ZP_07951345.1| cytochrome o ubiquinol oxidase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|365835446|ref|ZP_09376865.1| cytochrome o ubiquinol oxidase, subunit I [Hafnia alvei ATCC 51873]
 gi|316919043|gb|EFV40378.1| cytochrome o ubiquinol oxidase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|364566021|gb|EHM43725.1| cytochrome o ubiquinol oxidase, subunit I [Hafnia alvei ATCC 51873]
          Length = 663

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/585 (65%), Positives = 464/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G +L+ +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVVLINLSLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATIIKMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIIKMRAPGMSLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEVV+TF  
Sbjct: 248 VTVALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITILSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIITFTVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYGLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      +AA G  LIA GI   +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPAFHPLLMVAAGGAALIACGIACQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +H  D++W +K+    + K +K+  I MP+NT  G++I+ FSL+ GFA++
Sbjct: 548 PFYNFAIEPQVHSRDAFWELKEEGIAYKKPEKYAPIHMPRNTGAGVIIAGFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W +W L I+ F+  +   I ++FN   +YY+   EI  IE +   
Sbjct: 608 WDIWWLAIVCFLGMIATWIVHSFNDDVDYYVQVPEIERIENQHFE 652


>gi|432659673|ref|ZP_19895334.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE111]
 gi|431203790|gb|ELF02380.1| ubiquinol oxidase subunit 1 [Escherichia coli KTE111]
          Length = 663

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+V FMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVVFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|419304958|ref|ZP_13846872.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11D]
 gi|419309983|ref|ZP_13851860.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11E]
 gi|378153087|gb|EHX14173.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11D]
 gi|378161706|gb|EHX22682.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli DEC11E]
          Length = 663

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +T S 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATLSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|82542919|ref|YP_406866.1| cytochrome o ubiquinol oxidase subunit I [Shigella boydii Sb227]
 gi|416296126|ref|ZP_11651332.1| Cytochrome O ubiquinol oxidase subunit I [Shigella flexneri CDC
           796-83]
 gi|417680646|ref|ZP_12330031.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 3594-74]
 gi|420351199|ref|ZP_14852398.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 4444-74]
 gi|81244330|gb|ABB65038.1| cytochrome o ubiquinol oxidase subunit I [Shigella boydii Sb227]
 gi|320186060|gb|EFW60805.1| Cytochrome O ubiquinol oxidase subunit I [Shigella flexneri CDC
           796-83]
 gi|332098604|gb|EGJ03570.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 3594-74]
 gi|391289054|gb|EIQ47550.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii 4444-74]
          Length = 663

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+ SSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWANSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|339325159|ref|YP_004684852.1| ubiquinol oxidase subunit 1 [Cupriavidus necator N-1]
 gi|338165316|gb|AEI76371.1| ubiquinol oxidase subunit 1 [Cupriavidus necator N-1]
          Length = 657

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/584 (64%), Positives = 466/584 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++   + G LPPEHY+QIFTAHGVIMIFFVAMPL+TG++N +V
Sbjct: 68  MLLRGFSDAIMMRAQLALATNGATGVLPPEHYDQIFTAHGVIMIFFVAMPLMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLFVAGAMLVNISLGVGEFAKTGWLAYPPLSGLDFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N + TI++MRAPGM LM MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 188 DYYLWSLQISGLGTLLTGVNFLVTILRMRAPGMTLMRMPVFTWTALCTNVLIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 248 VTLALLGLDRYLGMHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYKGMVYATAAIMVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++   P+LWT+GFMITFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQMTTPVLWTLGFMITFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++GI YW+PKAFG+KL    GK +FW WL+GFY AFMPLY+LG MG+TRR++H +
Sbjct: 428 VLFGYLAGITYWWPKAFGFKLNERLGKYAFWCWLVGFYFAFMPLYVLGLMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G + +A+GI   ++Q++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWTPWLYLAVVGVVFVALGIFFQVLQIVVSIRDRKKLADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P++   D++  MK      P + ++ I MPKNT  G +I  FSL+ GFAL W
Sbjct: 548 PFYNFAHTPVVRDLDAFADMKARGETLPTEGYEKIHMPKNTGAGFIIGAFSLVFGFALTW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W +  +  +  +   I+ + +   +YY+ + E+  IE ++++
Sbjct: 608 HIWWMAAVGLVGMIWAFIHRSNDDHIDYYVPATEVEQIETRQLQ 651


>gi|300721998|ref|YP_003711278.1| cytochrome o ubiquinol oxidase subunit I [Xenorhabdus nematophila
           ATCC 19061]
 gi|297628495|emb|CBJ89062.1| cytochrome o ubiquinol oxidase, subunit I [Xenorhabdus nematophila
           ATCC 19061]
          Length = 660

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/583 (64%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MMLRGFADAIMMRGQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G  L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVALINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++G+GTLL+G+N   TI++MRAPGM +M +P+FTW +LCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQLSGVGTLLTGVNFFVTILRMRAPGMSMMKLPVFTWASLCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITILSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F+ P+LWT+GF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFKTPMLWTVGFLVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKAFG+ L   WG  +FWFW+ GF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGTTYWFPKAFGFTLNEKWGVRAFWFWITGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G +LIA+GIL  +IQ  VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHPMLVVAAGGVVLIALGILCQVIQFYVSIRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D+WW MK+   ++ +  K+++I MP+NT  G++IS F LI+GFAL+
Sbjct: 548 PFYNFAEVPHIQTRDAWWDMKEKGIEYKRPAKYEEIHMPRNTAAGVVISAFCLILGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SF   +I  I  +F+   +YY+   E+  +E +R
Sbjct: 608 WHIWWMAIGSFAGIVISCIVKSFDEDVDYYVPVAEVEKVENQR 650


>gi|334703884|ref|ZP_08519750.1| ubiquinol oxidase polypeptide I [Aeromonas caviae Ae398]
          Length = 641

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/583 (65%), Positives = 468/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAV+MR QQ I+ G   GYL   HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 51  MLLRGFADAVLMRGQQVIASGGGEGYLNAHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+   +L+ +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 111 PLQIGARDVAFPFLNNLSFWFTAAAVVLINVSLGVGEFAQTGWLAYPPLSGLEFSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATII+MRAPGM +M +P+FTWTALC NILI+A+FP+LT
Sbjct: 171 DYWIWSLQISGLGTLLTGVNFFATIIRMRAPGMTMMRLPVFTWTALCANILIIASFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEVV+TF  
Sbjct: 231 VTIALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVVATFCK 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATV IT+LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 291 KKLFGYTSLVWATVAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF+ITF +GGM GV+L+VPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYRGRIEFTSPMLWTVGFIITFTVGGMTGVLLSVPAANFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+  WGK +FW W+ GF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 411 VVFGCFAGITYWFPKAFGFKLDDVWGKRAFWCWITGFFVAFMPLYVLGFMGMTRRVSQNI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D     W  +AA G  LIA+G+L  +IQ++VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 471 DPEFHGWLVVAACGAGLIALGVLCQVIQIVVSIRDREKNRDLTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D++W  K +   + K  ++  I MPKN+  G++I+ FS++ GFA++
Sbjct: 531 PFYNFAIEPKVTGLDAFWEAKADGSAYKKPAQYVPIHMPKNSGAGVIIAAFSVVFGFAMI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I  FI  +   I ++FN   +YY+  +EI  IE + 
Sbjct: 591 WHIWWMAIAGFIGMIATWIIHSFNDDVDYYVQVDEIERIEGQH 633


>gi|421496779|ref|ZP_15943987.1| ubiquinol oxidase polypeptide I [Aeromonas media WS]
 gi|407184209|gb|EKE58058.1| ubiquinol oxidase polypeptide I [Aeromonas media WS]
          Length = 633

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 469/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++   S GYL   HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 43  MLLRGFADAVMMRGQQVMASAGSEGYLNAHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 102

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+   +L+ +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 103 PLQIGARDVAFPFLNNLSFWFTAAAVVLINVSLGVGEFAQTGWLAYPPLSGLEFSPGVGV 162

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATII+MRAPGM +M +P+FTWTALC NILI+A+FP+LT
Sbjct: 163 DYWIWSLQISGLGTLLTGVNFFATIIRMRAPGMTMMRLPVFTWTALCANILIIASFPILT 222

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEVV+TF  
Sbjct: 223 VTIALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVVATFCK 282

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATV IT+LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 283 KKLFGYTSLVWATVAITVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 342

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF+ITF +GGM GV+L+VPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 343 FTMYRGRIEFSSPMLWTVGFIITFTVGGMTGVLLSVPAANFVLHNSLFLIAHFHNVIIGG 402

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL+  WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 403 VVFGCFAGITYWFPKAFGFKLDDVWGKRAFWFWITGFFVAFMPLYVLGFMGMTRRVSQNI 462

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D     W  +AA G  LIA+G+L  +IQ++VS R R    D TGDPW GRTLEW+TSSPP
Sbjct: 463 DPEFHGWLVVAACGAGLIAIGVLCQLIQVVVSIRDREKNRDWTGDPWGGRTLEWATSSPP 522

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D++W  K++   + +  K+  I MPKN+  G++I+ FS++ GFA++
Sbjct: 523 PFYNFAIEPKVTGLDAFWEAKEDGSAYRQPAKYAPIHMPKNSGAGVIIAAFSVVFGFAMI 582

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I  F+  +   I ++FN   +YY+  +EI  IE + 
Sbjct: 583 WHIWWMAIAGFVGMIATWIIHSFNDDVDYYVQVDEIERIEGQH 625


>gi|420318871|ref|ZP_14820728.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           2850-71]
 gi|391254788|gb|EIQ13947.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           2850-71]
          Length = 663

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL Y PLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYLPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|187734130|ref|YP_001879141.1| cytochrome o ubiquinol oxidase subunit I [Shigella boydii CDC
           3083-94]
 gi|187431122|gb|ACD10396.1| cytochrome o ubiquinol oxidase, subunit I [Shigella boydii CDC
           3083-94]
          Length = 663

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+ PVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILIQPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG K FNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKTFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|430805968|ref|ZP_19433083.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus sp. HMR-1]
 gi|429501796|gb|ELA00123.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus sp. HMR-1]
          Length = 657

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/581 (65%), Positives = 459/581 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++   S G+LPPEHY+Q+FTAHGVIMIFFVAMPL+TG++N +V
Sbjct: 68  MLLRGFADAVMMRTQLAVATNGSTGFLPPEHYDQVFTAHGVIMIFFVAMPLMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLFVAGAMLVNVSLGVGEFARTGWLAYPPLSGLDYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N + TI+KMRAPGM LM MP+FTWT LCTN+LIVAAFPVLT
Sbjct: 188 DYYLWSLQISGLGTLLTGVNFLVTILKMRAPGMTLMRMPVFTWTVLCTNVLIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY   HFFTN+ GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE++STFS 
Sbjct: 248 VSLALLGLDRYFDMHFFTNNGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEIISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYKGMVYATSAIMVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++F  P+LWT+GFMITFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQFTSPVLWTLGFMITFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+ YW+PKAFG+KL    GKC+FW WL+GFY AFMPLY+LG MG+TRR++H +
Sbjct: 428 VLFGYLAGVTYWWPKAFGFKLNERLGKCAFWCWLVGFYFAFMPLYVLGLMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G + +A+GI   ++Q++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWTPWLHLAVVGVVFVALGIFFQVLQIVVSIRDRKKLADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNFA  P++   D++  MK    K   D F+ I MPKNT  G  +  FSL +GFAL W
Sbjct: 548 AFYNFAHTPVVRDLDAFADMKARGEKIRTDGFEQIHMPKNTAAGFYMGAFSLALGFALTW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           H+W L  +  I  ++  I    +   +YY+ + E+  IE +
Sbjct: 608 HIWWLAAVGLIGMVVAFIRRANDDHIDYYVPASEVEQIETR 648


>gi|23500958|ref|NP_697085.1| ubiquinol oxidase subunit I [Brucella suis 1330]
 gi|161618033|ref|YP_001591920.1| cytochrome o ubiquinol oxidase subunit I [Brucella canis ATCC
           23365]
 gi|256368509|ref|YP_003106015.1| cytochrome o ubiquinol oxidase subunit I [Brucella microti CCM
           4915]
 gi|261324163|ref|ZP_05963360.1| cytochrome o ubiquinol oxidase subunit I [Brucella neotomae 5K33]
 gi|261751368|ref|ZP_05995077.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis bv. 5 str.
           513]
 gi|261755933|ref|ZP_05999642.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis bv. 3 str.
           686]
 gi|265983224|ref|ZP_06095959.1| cytochrome o ubiquinol oxidase subunit I [Brucella sp. 83/13]
 gi|306840006|ref|ZP_07472800.1| cytochrome o ubiquinol oxidase, subunit I [Brucella sp. NF 2653]
 gi|306842664|ref|ZP_07475309.1| cytochrome o ubiquinol oxidase, subunit I [Brucella sp. BO2]
 gi|376275186|ref|YP_005115625.1| cytochrome o ubiquinol oxidase subunit I [Brucella canis HSK
           A52141]
 gi|376279746|ref|YP_005153752.1| ubiquinol oxidase subunit I [Brucella suis VBI22]
 gi|384223740|ref|YP_005614904.1| ubiquinol oxidase subunit I [Brucella suis 1330]
 gi|23346815|gb|AAN29000.1| ubiquinol oxidase subunit I [Brucella suis 1330]
 gi|161334844|gb|ABX61149.1| cytochrome o ubiquinol oxidase, subunit I [Brucella canis ATCC
           23365]
 gi|255998667|gb|ACU47066.1| cytochrome o ubiquinol oxidase subunit I [Brucella microti CCM
           4915]
 gi|261300143|gb|EEY03640.1| cytochrome o ubiquinol oxidase subunit I [Brucella neotomae 5K33]
 gi|261741121|gb|EEY29047.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis bv. 5 str.
           513]
 gi|261745686|gb|EEY33612.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis bv. 3 str.
           686]
 gi|264661816|gb|EEZ32077.1| cytochrome o ubiquinol oxidase subunit I [Brucella sp. 83/13]
 gi|306287199|gb|EFM58696.1| cytochrome o ubiquinol oxidase, subunit I [Brucella sp. BO2]
 gi|306404970|gb|EFM61255.1| cytochrome o ubiquinol oxidase, subunit I [Brucella sp. NF 2653]
 gi|343381920|gb|AEM17412.1| ubiquinol oxidase subunit I [Brucella suis 1330]
 gi|358257345|gb|AEU05080.1| ubiquinol oxidase subunit I [Brucella suis VBI22]
 gi|363403753|gb|AEW14048.1| cytochrome o ubiquinol oxidase, subunit I [Brucella canis HSK
           A52141]
          Length = 659

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 472/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|306843643|ref|ZP_07476244.1| cytochrome o ubiquinol oxidase, subunit I [Brucella inopinata BO1]
 gi|306276334|gb|EFM58034.1| cytochrome o ubiquinol oxidase, subunit I [Brucella inopinata BO1]
          Length = 659

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 472/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  ++Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQVLQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|225851586|ref|YP_002731819.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis ATCC
           23457]
 gi|256264903|ref|ZP_05467435.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 2
           str. 63/9]
 gi|225639951|gb|ACN99864.1| cytochrome o ubiquinol oxidase, subunit I [Brucella melitensis ATCC
           23457]
 gi|263095388|gb|EEZ18989.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 2
           str. 63/9]
          Length = 659

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 473/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW+HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWVHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKNAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|260567309|ref|ZP_05837779.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis bv. 4 str.
           40]
 gi|260156827|gb|EEW91907.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis bv. 4 str.
           40]
          Length = 659

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 472/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFACIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|333899211|ref|YP_004473084.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fulva 12-X]
 gi|333114476|gb|AEF20990.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fulva 12-X]
          Length = 657

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/584 (65%), Positives = 461/584 (78%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q AI+ G S GYLPP HY+QIFTAHG IMIFFVAMPLV G++N + 
Sbjct: 68  MLLRGFADAIMMRTQLAIATGGSEGYLPPHHYDQIFTAHGTIMIFFVAMPLVVGLMNIVT 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L  ISLF+GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVLLTNISLFVGEFAMTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N   TIIKMRAPGM LM MPIFTWT LCT+++I  AFP+LT
Sbjct: 188 DYYIWALQISGIGTLLTGVNFFVTIIKMRAPGMTLMKMPIFTWTILCTSVIICGAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMYVNL+W WGHPEVYIL+LP FG+FSEV + F+ 
Sbjct: 248 AVLGMLTLDRYLDFHFFTNEAGGNPMMYVNLLWAWGHPEVYILILPAFGVFSEVTAVFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+ATV IT+LS++VWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KRLFGYASMVWATVAITVLSFVVWLHHFFTMGSGASVNAFFGIATMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  PILWT+GF+ITF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRLEFTSPILWTLGFIITFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+GI +WFPKAFG+KL   WGK SFWFW++GFY AFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYMAGITFWFPKAFGFKLHEGWGKASFWFWIVGFYFAFMPLYVLGFMGMTRRLNSTT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +A  G +LI +GIL  +IQ  VS  KR  L D+TGDPW+ RTLEWSTSSPP
Sbjct: 488 NPEWEPWLYVAVVGAVLIGIGILCTLIQFAVSIIKRKELADVTGDPWDARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P   + D +   K++  K    K+  I MPKNT +G+++SI +L  GFAL+W
Sbjct: 548 PFYNFAVTPHADRIDEFHEQKRDGLKPAPSKYSPIHMPKNTGVGLIMSIGALAFGFALIW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L  +SF+ T  ++I N++N   +YY+  +EI  IE   I+
Sbjct: 608 HIWWLAALSFVGTFAVLIRNSYNTDVDYYVQPDEIERIENAHIQ 651


>gi|238920120|ref|YP_002933635.1| cytochrome o ubiquinol oxidase, subunit I, putative [Edwardsiella
           ictaluri 93-146]
 gi|238869689|gb|ACR69400.1| cytochrome o ubiquinol oxidase, subunit I, putative [Edwardsiella
           ictaluri 93-146]
          Length = 663

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 469/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+Q+F+AHGVIMIFF+AMP+V G++N +V
Sbjct: 68  MLLRGFADAIMMRGQQALASAGEAGFLPPHHYDQVFSAHGVIMIFFMAMPMVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVVLINLSLGVGEFAQTGWLAYPPLSGKEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N I TI+KMRAPGM LM MP+FTWTALC+NILI  AFP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFITTILKMRAPGMSLMKMPVFTWTALCSNILITVAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTN++GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNEMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT+LS+IVWLHHFFTMG+GANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITVLSFIVWLHHFFTMGAGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+F   +LWTIGF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIQFNTAMLWTIGFIVTFTVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + +NYWFPK+FG+ L   WG  +FWFWLIGF++AFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAVNYWFPKSFGFTLNEKWGIRAFWFWLIGFFIAFMPLYVLGFMGMTRRISQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA G+L  IIQ++VS R R    D+TGDPW+ RTLEWSTSSPP
Sbjct: 488 NAEFHPLLLVAAGGAALIACGVLCQIIQIVVSVRDREQNRDLTGDPWDARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K   ++ I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAIVPQIHDRDEFWEMKERGDAYKKPAHYEPIHMPKNTGAGVIIACFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + ++ FI  L++ I  +F++  +Y++  +EI  IE + 
Sbjct: 608 WEIWWMALVGFIGILVVWIGKSFDHDVDYFVPVDEIARIENQH 650


>gi|384444131|ref|YP_005602850.1| cytochrome O ubiquinol oxidase subunit I [Brucella melitensis NI]
 gi|349742128|gb|AEQ07671.1| cytochrome O ubiquinol oxidase subunit I [Brucella melitensis NI]
          Length = 659

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 472/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKNAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|17547635|ref|NP_521037.1| transmembrane cytochrome O ubiquinol oxidase subunit I [Ralstonia
           solanacearum GMI1000]
 gi|17429939|emb|CAD16623.1| probable transmembrane cytochrome o ubiquinol oxidase (subunitI
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 659

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/584 (65%), Positives = 464/584 (79%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAIMMRSQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +LV +SL +G FA TGWL YPPLS +A SP VGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELAYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+  HFFTN  GGN M+YVNLIWIWGHPEVYILVLP FG+FSE++STFS 
Sbjct: 248 VALALLGLDRYLDMHFFTNTAGGNAMLYVNLIWIWGHPEVYILVLPAFGMFSEIISTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVYATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVEFTSPVLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI +WFPKAFG+KL+  WGK +FW W +GFY+AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITFWFPKAFGFKLDEKWGKRAFWCWFVGFYLAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVIGAAVIACGIASQLIQIVVSIRNRKALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P++   D++  MK    + P      ++ I MPKNT  G  I +FS++MGFA
Sbjct: 548 AHYNFATVPVVRDIDAFADMKARG-EVPTQVAASYEKIHMPKNTGAGFFIGMFSIVMGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           LVWH+W + ++     ++  I+ + N   +YY+ ++E+   E  
Sbjct: 607 LVWHIWWMAVLGLGGMIVSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|17988183|ref|NP_540817.1| cytochrome O ubiquinol oxidase subunit I [Brucella melitensis bv. 1
           str. 16M]
 gi|260563124|ref|ZP_05833610.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 1
           str. 16M]
 gi|265992247|ref|ZP_06104804.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 1
           str. Rev.1]
 gi|384210408|ref|YP_005599490.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis
           M5-90]
 gi|384407508|ref|YP_005596129.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis M28]
 gi|17983944|gb|AAL53081.1| cytochrome o ubiquinol oxidase subunit i [Brucella melitensis bv. 1
           str. 16M]
 gi|260153140|gb|EEW88232.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 1
           str. 16M]
 gi|263003313|gb|EEZ15606.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 1
           str. Rev.1]
 gi|326408055|gb|ADZ65120.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis M28]
 gi|326537771|gb|ADZ85986.1| cytochrome o ubiquinol oxidase, subunit I [Brucella melitensis
           M5-90]
          Length = 659

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 472/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKNAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|148559530|ref|YP_001258090.1| cytochrome o ubiquinol oxidase subunit I [Brucella ovis ATCC 25840]
 gi|148370787|gb|ABQ60766.1| cytochrome o ubiquinol oxidase, subunit I [Brucella ovis ATCC
           25840]
          Length = 659

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 471/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I   IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHICLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|397167158|ref|ZP_10490601.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter
           radicincitans DSM 16656]
 gi|396091304|gb|EJI88871.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter
           radicincitans DSM 16656]
          Length = 663

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/583 (64%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEITATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSSMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFGY L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGYTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLIVAACGAALIAIGILCLLIQIYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAHVPHVHERDAFWEMKEKGEAYKKPAQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWMAIVGFAGIIISWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|94309894|ref|YP_583104.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus metallidurans
           CH34]
 gi|93353746|gb|ABF07835.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus metallidurans
           CH34]
          Length = 657

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/581 (65%), Positives = 459/581 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++   S G+LPPEHY+Q+FTAHGVIMIFFVAMPL+TG++N +V
Sbjct: 68  MLLRGFADAVMMRTQLAVATNGSTGFLPPEHYDQVFTAHGVIMIFFVAMPLMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV +SL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLFVAGAMLVNVSLGVGEFARTGWLAYPPLSGLDYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N + TI+KMRAPGM LM MP+FTWT LCTN+LIVAAFPVLT
Sbjct: 188 DYYLWSLQISGLGTLLTGVNFLVTILKMRAPGMTLMRMPVFTWTVLCTNVLIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY   HFFTN+ GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE++STFS 
Sbjct: 248 VSLALLGLDRYFDMHFFTNNGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEIISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYKGMVYATSAIMVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++F  P+LWT+GFMITFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQFTSPVLWTLGFMITFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+ YW+PKAFG+KL    GKC+FW WL+GFY AFMPLY+LG MG+TRR++H +
Sbjct: 428 VLFGYLAGVTYWWPKAFGFKLNERLGKCAFWCWLVGFYFAFMPLYVLGLMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G + +A+GI   ++Q++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWTPWLHLAVVGVVFVALGIFFQVLQIVVSIRDRKKLADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNFA  P++   D++  MK        D F+ I MPKNT  G  +  FSL++GFAL W
Sbjct: 548 AFYNFAHTPVVRDLDAFADMKARGETIRTDGFEQIHMPKNTAAGFYMGAFSLVLGFALTW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           H+W L  +  I  ++  I    +   +YY+ + E+  IE +
Sbjct: 608 HIWWLAAVGLIGMVVAFIRRANDDHIDYYVPASEVEQIETR 648


>gi|290474673|ref|YP_003467553.1| cytochrome o ubiquinol oxidase subunit I [Xenorhabdus bovienii
           SS-2004]
 gi|289173986|emb|CBJ80773.1| cytochrome o ubiquinol oxidase, subunit I [Xenorhabdus bovienii
           SS-2004]
          Length = 660

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MMVRGFADAIMMRGQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVVLINLSLGVGEFAQTGWLAYPPLSGKLYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGTLL+G+N   TI++MRAPGM +M MP+F+WT LCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQLSGIGTLLTGVNFFVTILRMRAPGMSMMKMPVFSWTVLCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGIFSEV +TF+ 
Sbjct: 248 VTVALLTLDRYMGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIFSEVTATFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITILSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F+ P+LWT+GF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFKTPMLWTVGFLVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKAFG+ L   WG  +FWFW+ GF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGTAYWFPKAFGFTLNEKWGIRAFWFWITGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      +AA G +LIA+GIL  +IQ  VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPAFHTMLVVAAGGVVLIALGILCQVIQFYVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D+WW MK+ +    +  K+++I MPKNT+ GI+IS F LI GFA++
Sbjct: 548 PFYNFAEVPHIQTRDAWWDMKEKDTAHKRPAKYEEIHMPKNTSAGIIISAFLLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W L I SF  T+I  I  +F+   +YY+   E+   E + 
Sbjct: 608 WDIWWLAIASFAGTIITWIVKSFDEDVDYYVPVAEVEKTENQH 650


>gi|293392551|ref|ZP_06636871.1| cytochrome o ubiquinol oxidase subunit I [Serratia odorifera DSM
           4582]
 gi|291424953|gb|EFE98162.1| cytochrome o ubiquinol oxidase subunit I [Serratia odorifera DSM
           4582]
          Length = 673

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 78  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 198 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 258 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 318 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYQGRIQFNSAMLWTIGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 438 VVFGCFAGLTYWFPKSFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G +LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 498 NPEFHPLLLVAAGGAVLIACGILCQLIQIFVSVRDRDQNRDLTGDPWGGRTLEWATSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D++W MK+    + K  K++ I MPKNT  G++I+ FSLI GFA++
Sbjct: 558 PFYNFAVVPEIHDRDAFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIAFFSLIFGFAMI 617

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + +  FI  +++ I  +F+   +YY+  +EI  IE + 
Sbjct: 618 WEIWWMALAGFIGMIVVWIAKSFDQDVDYYVQVDEIEHIENQH 660


>gi|420334597|ref|ZP_14836219.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri K-315]
 gi|391268288|gb|EIQ27216.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri K-315]
          Length = 646

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 51  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV FPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVVFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 171 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 231 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 411 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWSIGFFVAFMPLYALGFMGMTRRLSQQI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                    IAA G +LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 471 APQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K D +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 531 PFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 591 WHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQH 633


>gi|241664396|ref|YP_002982756.1| cytochrome o ubiquinol oxidase subunit I [Ralstonia pickettii 12D]
 gi|240866423|gb|ACS64084.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia pickettii 12D]
          Length = 659

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/584 (65%), Positives = 461/584 (78%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAIMMRSQLAVASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +L+ +SL +GEFA TGWL YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLINVSLGVGEFARTGWLAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTND GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNDGGGNAMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVWATAAITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL+  WGK +FW W +GFY AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITYWFPKAFGFKLDEKWGKRAFWCWFVGFYTAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ+ VS R RH L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVIGAAIIACGIASQLIQIFVSVRNRHALADLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P+I   D++  MK    + P      ++ I MPKNT  G  I +FS++MGFA
Sbjct: 548 AHYNFARVPVIRDIDAFADMKARG-EVPTQVAPSYEKIHMPKNTGAGFFIGMFSIVMGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W + ++  +  +   I  + N   +YY+ + E+   E  
Sbjct: 607 LIWHIWWMAVLGLVGMIGSFILRSNNDDIDYYVPAHEVHETESA 650


>gi|163842319|ref|YP_001626723.1| cytochrome o ubiquinol oxidase subunit I [Brucella suis ATCC 23445]
 gi|163673042|gb|ABY37153.1| cytochrome o ubiquinol oxidase, subunit I [Brucella suis ATCC
           23445]
          Length = 659

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 471/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKN   G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNMATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|309782935|ref|ZP_07677655.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia sp. 5_7_47FAA]
 gi|404397631|ref|ZP_10989421.1| ubiquinol oxidase subunit 1 [Ralstonia sp. 5_2_56FAA]
 gi|308918359|gb|EFP64036.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia sp. 5_7_47FAA]
 gi|348612598|gb|EGY62212.1| ubiquinol oxidase subunit 1 [Ralstonia sp. 5_2_56FAA]
          Length = 659

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/583 (65%), Positives = 460/583 (78%), Gaps = 2/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAIMMRSQLAVASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +L+ +SL +GEFA TGWL YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLINVSLGVGEFARTGWLAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTND GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNDGGGNAMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVWATAAITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL+  WGK +FW W +GFY AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITYWFPKAFGFKLDEKWGKRAFWCWFVGFYTAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ+ VS R RH L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVIGAAIIACGIASQLIQIFVSVRNRHALADLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK--DKFQDILMPKNTNIGILISIFSLIMGFAL 538
             YNFA +P+I   D++  MK       +    ++ I MPKNT  G  I +FS++MGFAL
Sbjct: 548 AHYNFARVPVIRDIDAFADMKARGEVLTQVAPSYEKIHMPKNTGAGFFIGMFSIVMGFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +WH+W + ++  +  +   I  + N   +YY+ + E+   E  
Sbjct: 608 IWHIWWMAVLGLVGMIGSFILRSNNDDIDYYVPAHEVHETESA 650


>gi|265993990|ref|ZP_06106547.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 3
           str. Ether]
 gi|262764971|gb|EEZ10892.1| cytochrome o ubiquinol oxidase subunit I [Brucella melitensis bv. 3
           str. Ether]
          Length = 659

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 471/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKNAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKN   G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNAATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|261341032|ref|ZP_05968890.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316897|gb|EFC55835.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter
           cancerogenus ATCC 35316]
          Length = 663

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA GI S +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMIAAGGAVLIACGIASQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQIHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +EK+ 
Sbjct: 608 WHIWWLAIVGFAGIVISWIVKSFDEDVDYYVPVREVETLEKQH 650


>gi|225626590|ref|ZP_03784629.1| cytochrome o ubiquinol oxidase, subunit I [Brucella ceti str. Cudo]
 gi|261221273|ref|ZP_05935554.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti B1/94]
 gi|261759159|ref|ZP_06002868.1| cytochrome o ubiquinol oxidase subunit I [Brucella sp. F5/99]
 gi|265997234|ref|ZP_06109791.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti M490/95/1]
 gi|225618247|gb|EEH15290.1| cytochrome o ubiquinol oxidase, subunit I [Brucella ceti str. Cudo]
 gi|260919857|gb|EEX86510.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti B1/94]
 gi|261739143|gb|EEY27139.1| cytochrome o ubiquinol oxidase subunit I [Brucella sp. F5/99]
 gi|262551702|gb|EEZ07692.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti M490/95/1]
          Length = 659

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 471/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+G+GTLLS +N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS 
Sbjct: 248 VTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KHLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SSP
Sbjct: 488 NPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA++
Sbjct: 548 PPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 WHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 652


>gi|284006413|emb|CBA71649.1| cytochrome O ubiquinol oxidase subunit I [Arsenophonus nasoniae]
          Length = 662

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/583 (65%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 67  MLLRGFADAIMMRGQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LS W+   G IL+ +SL IGEFA TGWL YPPLSG   +PGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSLWLFIVGVILINLSLGIGEFAQTGWLAYPPLSGKEYNPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGT L+GIN  ATI++MRAPGM +M MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 187 DYWIWSLQISGIGTTLTGINFFATILRMRAPGMSMMKMPVFTWTALCTNVLIIAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYILVLPVFG+FSEV +TF+ 
Sbjct: 247 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILVLPVFGVFSEVTATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S++VWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 307 KRLFGYTSLVWATIVITVMSFVVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRI F+ P+LWTIGF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYHGRIEFKTPMLWTIGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+ GF++AFMPLYILGFMG+TRR+S   
Sbjct: 427 VVFGCFAGMTYWFPKAFGFTLNEKWGVRAFWFWISGFFIAFMPLYILGFMGMTRRLSQNI 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IA+ G  LIA+GI   +IQ+IVS R RH   DITGDPW+GRTLEWSTSSP 
Sbjct: 487 DPQYHPMLMIASLGAALIAIGIFCQVIQIIVSIRDRHKNRDITGDPWSGRTLEWSTSSPA 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D+WW MK+    + +  K++ I MPKNT  G++IS F LI GFA+V
Sbjct: 547 PFYNFAKEPQIDTRDAWWDMKEKGIAYKQPTKYEPIHMPKNTAAGVIISAFCLIFGFAMV 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L II F   +   I  +F+   +YY+  EEI  IE + 
Sbjct: 607 WHIWWLAIIGFAGIIATWIGKSFDDNVDYYVPVEEIKRIENQH 649


>gi|73540686|ref|YP_295206.1| cytochrome-c oxidase [Ralstonia eutropha JMP134]
 gi|72118099|gb|AAZ60362.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Ralstonia
           eutropha JMP134]
          Length = 657

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/584 (64%), Positives = 463/584 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DAVMMR Q A++   + G LPPEHY+QIFTAHGVIMIFFVAMPL+TG++N +V
Sbjct: 68  MLLRGFSDAVMMRAQLALATNGAHGVLPPEHYDQIFTAHGVIMIFFVAMPLMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLFVSGAMLVNISLGVGEFAKTGWLAYPPLSGLDFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N + TI+KMRAPGM LM MP+FTWTALCTN+LIVAAFPVLT
Sbjct: 188 DYYLWSLQISGLGTLLTGVNFLVTILKMRAPGMTLMRMPVFTWTALCTNVLIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY   HFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 248 VSLALLGLDRYFDMHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KKLFGYKGMVYATAAIMVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++   P+LWT+GFMITFVIGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQMTTPVLWTLGFMITFVIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++GI YW+PKAFG+ L    GK +FW WL+GFY AFMPLY+LG MG+TRR++H +
Sbjct: 428 VLFGYLAGITYWWPKAFGFTLNERLGKYAFWCWLVGFYFAFMPLYVLGLMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G + +A+GI   ++Q++VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWTPWLYLAVVGVVFVALGIFFQVLQIVVSIRDRKKLADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P++   D++  MK      P   ++ I MPKNT  G  + +FSL++GFALVW
Sbjct: 548 PFYNFAHTPVVRDLDAFADMKARGETIPTSGYEQIHMPKNTGAGFWMGLFSLVLGFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L  +  +  ++  I    +   +YY+ + E+  IE ++++
Sbjct: 608 HIWWLAAVGLVGMVVSFIRRANDDHIDYYVPAAEVEQIETRQLQ 651


>gi|423097554|ref|ZP_17085350.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           Q2-87]
 gi|397884558|gb|EJL01041.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           Q2-87]
          Length = 658

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 471/586 (80%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   S GYLPPEHY+QIFTAHGVIMIFF+AMPLV G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMASDGSAGYLPPEHYDQIFTAHGVIMIFFMAMPLVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+LV +SL IGEFA TGW+ YPPLSG++ SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFVAGAMLVNVSLAIGEFARTGWVAYPPLSGLSYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GTLL+G+N   TI+KMR PGM L  MP+FTWT LCT++LI+A+FP+LT
Sbjct: 188 DYYIWSLQISGVGTLLTGVNFFVTILKMRTPGMTLFRMPVFTWTVLCTSVLILASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LF+ +LDRY+  HFFTN+LGGN MMYVNLIW WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 ATLFMLSLDRYLDMHFFTNELGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEVASTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+VIT+LS+IVW+HHFFTMGSGANVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYHSLVWATIVITILSFIVWVHHFFTMGSGANVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVRFETPMLWTVGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG + G+ YWFPKAFG+KL    G+ +FW W+ GFY AFMP Y LGFMG+TRR++HF+
Sbjct: 428 AVFGYLCGLTYWFPKAFGFKLHDGLGRAAFWCWITGFYFAFMPSYFLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
               + W ++   G  +I  G++  I+Q   S R RH   D+TGD W +GRTLEWST+SP
Sbjct: 488 VPEWRPWLEVELLGVGIILCGVVCQILQFFFSIRHRHQNRDVTGDSWGDGRTLEWSTASP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PP YNFA  P++   D++W MK+   K   +  FQ I MP+NT++G++IS+FSL+M FAL
Sbjct: 548 PPFYNFAQQPVVDGIDAYWGMKERGQKTAVEADFQSIHMPRNTSMGLVISLFSLVMCFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VWH+W L I+  + T+  VI+ + +   +YY+ +EE+  IE +RI+
Sbjct: 608 VWHIWWLAIVGLVATIAGVIWRSADDDIDYYVPAEEVARIENQRIK 653


>gi|440229726|ref|YP_007343519.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Serratia
           marcescens FGI94]
 gi|440051431|gb|AGB81334.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Serratia
           marcescens FGI94]
          Length = 663

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTIGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPEFHPLLMVAAGGAALIACGILCQLIQIFVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D++W MK+    + K  K++ I MPKNT  G++I  FSLI GFA++
Sbjct: 548 PFYNFATMPEIHDRDAFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIGFFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + +  FI  +++ I  +F+   +YY+  +EI  IE + 
Sbjct: 608 WEIWWMALAGFIGMIVVWIAKSFDQDVDYYVQVDEIERIENQH 650


>gi|444309701|ref|ZP_21145333.1| cytochrome o ubiquinol oxidase subunit I [Ochrobactrum intermedium
           M86]
 gi|443486968|gb|ELT49738.1| cytochrome o ubiquinol oxidase subunit I [Ochrobactrum intermedium
           M86]
          Length = 659

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/585 (65%), Positives = 470/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+Q+FTAHGVIMIFFVAMP + G++NF V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQVFTAHGVIMIFFVAMPFIVGLMNFAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG   SP VGV
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKEFSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLLSG+N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYIWALQISGMGTLLSGVNLITTIIKMRAPGMGMMQVPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLSLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIFSEIVATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYATV IT+LS++VW+HHFFTMG GANVNAFFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYKSMVYATVAITILSFLVWVHHFFTMGGGANVNAFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E PI+WTIGFM TFV+GGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPIMWTIGFMCTFVVGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGLVYWWPKAFGFKLNERLGKNAFWCWLVGFILAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  +AA G  +I  GI+  ++Q+ VS R R  L D  GD W  GRTLEWS +SP
Sbjct: 488 NPAWHIYLIVAAIGVAIILCGIVFQVLQIAVSIRDREKLRDNNGDSWGTGRTLEWSLASP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P  YNFA +P +   D WW MK+N +    +KF  I MPKNT  G +I + ++ +GFALV
Sbjct: 548 PAFYNFAEVPHVRDHDGWWDMKQNGYVRRTEKFARIHMPKNTGTGFIIGMLNIPLGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +  L + I ++FN  R++Y+S++E+  +E  R R
Sbjct: 608 WHIWWLVIASALAVLAVAIAHSFNNDRDFYVSADEVQEVEDLRTR 652


>gi|386717629|ref|YP_006183955.1| cytochrome O ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia D457]
 gi|384077191|emb|CCH11777.1| Cytochrome O ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia D457]
          Length = 646

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/585 (65%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQAI+ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 48  MLLRGFSDAIMMRTQQAIAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 107

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 108 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 167

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 168 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 227

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 228 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 287

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 288 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 347

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+ F  P+LWTIGFM+TFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 348 FTMFRGRVHFTTPVLWTIGFMVTFVIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 407

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 408 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 467

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    IAA G  ++  GIL  IIQ+ VS R R   +D+TGDPW+ RTLEW TSSPP
Sbjct: 468 NPAYEPLLLIAAAGAFIVGAGILCQIIQVAVSIRDRKKTVDLTGDPWDARTLEWETSSPP 527

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 528 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 587

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 588 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 632


>gi|344206543|ref|YP_004791684.1| cytochrome o ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia JV3]
 gi|343777905|gb|AEM50458.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas
           maltophilia JV3]
          Length = 665

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/585 (65%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQAI+ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 67  MLLRGFSDAIMMRTQQAIAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 127 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 187 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 247 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 307 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+ F  P+LWTIGFM+TFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMFRGRVHFTTPVLWTIGFMVTFVIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 427 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    IAA G  ++  GIL  IIQ+ VS R R   +D+TGDPW+ RTLEW TSSPP
Sbjct: 487 NPAYEPLLLIAAAGAFIVGAGILCQIIQVAVSIRDRKKTVDLTGDPWDARTLEWETSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 547 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 607 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 651


>gi|239830888|ref|ZP_04679217.1| cytochrome o ubiquinol oxidase, subunit I [Ochrobactrum intermedium
           LMG 3301]
 gi|239823155|gb|EEQ94723.1| cytochrome o ubiquinol oxidase, subunit I [Ochrobactrum intermedium
           LMG 3301]
          Length = 662

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/585 (65%), Positives = 470/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+Q+FTAHGVIMIFFVAMP + G++NF V
Sbjct: 71  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQVFTAHGVIMIFFVAMPFIVGLMNFAV 130

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG   SP VGV
Sbjct: 131 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKEFSPDVGV 190

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLLSG+N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 191 DYYIWALQISGMGTLLSGVNLITTIIKMRAPGMGMMQVPVFTWTALCSNVLIVAAFPILT 250

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 251 VTLALLSLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIFSEIVATFSG 310

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYATV IT+LS++VW+HHFFTMG GANVNAFFG+ TMIISIPTGAK+FNWL
Sbjct: 311 KRLFGYKSMVYATVAITILSFLVWVHHFFTMGGGANVNAFFGVATMIISIPTGAKVFNWL 370

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E PI+WTIGFM TFV+GGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 371 FTMYKGRVRMETPIMWTIGFMCTFVVGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 430

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 431 VLFGCFAGLVYWWPKAFGFKLNERLGKNAFWCWLVGFILAFMPLYVLGLMGMTRRLNHTE 490

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  +AA G  +I  GI+  ++Q+ VS R R  L D  GD W  GRTLEWS +SP
Sbjct: 491 NPAWHIYLIVAAIGVAIILCGIVFQVLQIAVSIRDREKLRDNNGDSWGTGRTLEWSLASP 550

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P  YNFA +P +   D WW MK+N +    +KF  I MPKNT  G +I + ++ +GFALV
Sbjct: 551 PAFYNFAEVPHVRDHDGWWDMKQNGYVRRTEKFARIHMPKNTGTGFIIGMLNIPLGFALV 610

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +  L + I ++FN  R++Y+S++E+  +E  R R
Sbjct: 611 WHIWWLVIASALAVLAVAIAHSFNNDRDFYVSADEVQEVEDLRTR 655


>gi|190573372|ref|YP_001971217.1| quinol oxidase subunit 1 [Stenotrophomonas maltophilia K279a]
 gi|190011294|emb|CAQ44907.1| putative quinol oxidase subunit 1 [Stenotrophomonas maltophilia
           K279a]
          Length = 667

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 69  MLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 129 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 189 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 249 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 309 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+ F  P+LWTIGFM+TFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 369 FTMFRGRVHFTTPVLWTIGFMVTFVIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 429 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    IAA G  ++  GIL  IIQ+ VS R R   +D+TGDPW+ RTLEW TSSPP
Sbjct: 489 NPAYEPLLLIAAAGAFIVGAGILCQIIQVAVSIRDRKKTVDLTGDPWDARTLEWETSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 549 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 609 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 653


>gi|408823174|ref|ZP_11208064.1| quinol oxidase subunit 1 [Pseudomonas geniculata N1]
          Length = 650

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 52  MLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 111

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 112 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 171

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 172 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 231

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 232 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 291

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 292 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 351

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+ F  P+LWTIGFM+TFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 352 FTMFRGRVHFTTPVLWTIGFMVTFVIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 411

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 412 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 471

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    IAA G  ++  GIL  IIQ+ VS R R   +D+TGDPW+ RTLEW TSSPP
Sbjct: 472 NPAYEPLLLIAAAGAFIVGAGILCQIIQVAVSIRDRKKTVDLTGDPWDARTLEWETSSPP 531

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 532 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 591

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 592 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 636


>gi|424667602|ref|ZP_18104627.1| ubiquinol oxidase subunit 1 [Stenotrophomonas maltophilia Ab55555]
 gi|30351178|gb|AAP22949.1| cytochrome oxidase subunit I [Rhizobium arachis]
 gi|401069216|gb|EJP77739.1| ubiquinol oxidase subunit 1 [Stenotrophomonas maltophilia Ab55555]
          Length = 665

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 67  MLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 127 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 187 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 247 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 307 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+ F  P+LWTIGFM+TFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMFRGRVHFTTPVLWTIGFMVTFVIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 427 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    IAA G  ++  GIL  IIQ+ VS R R   +D+TGDPW+ RTLEW TSSPP
Sbjct: 487 NPAYEPLLLIAAAGAFIVGAGILCQIIQVAVSIRDRKKTVDLTGDPWDARTLEWETSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 547 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 607 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 651


>gi|456735581|gb|EMF60332.1| Cytochrome O ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia EPM1]
          Length = 650

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/585 (65%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 52  MLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 111

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 112 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 171

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 172 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 231

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 232 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 291

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 292 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 351

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+ F  P+LWTIGFM+TFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 352 FTMFRGRVHFTTPVLWTIGFMVTFVIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 411

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 412 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 471

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    IAA G  ++  GIL  IIQ+ VS R R   +D+TGDPW+ RTLEW TSSPP
Sbjct: 472 NPAYEPLLLIAAAGAFIVGAGILCQIIQVAVSIRDRKKTVDLTGDPWDARTLEWETSSPP 531

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 532 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 591

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 592 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 636


>gi|300690263|ref|YP_003751258.1| cytochrome o ubiquinol oxidase subunit I [Ralstonia solanacearum
           PSI07]
 gi|299077323|emb|CBJ49949.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia solanacearum
           PSI07]
 gi|344169074|emb|CCA81398.1| cytochrome o ubiquinol oxidase, subunit I [blood disease bacterium
           R229]
          Length = 659

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/584 (65%), Positives = 462/584 (79%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAIMMRSQLALASGGGTGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +L+ +SL +GEFA TGWL YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLINVSLGVGEFARTGWLAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNTAGGNPMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVWATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL+  WGK +FW W +GFY AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITYWFPKAFGFKLDEKWGKRAFWCWFVGFYTAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ+ VS R RH L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVIGAAIIACGIASQLIQIFVSIRNRHALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P+I   D++  MK    + P      ++ I MPKNT  G  I +FS++MGFA
Sbjct: 548 AHYNFASVPVIRDIDAFADMKARG-EVPTQVAASYEKIHMPKNTGAGFFIGMFSIVMGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W + ++  +  +   I+ + N   +YY+ ++E+   E  
Sbjct: 607 LIWHIWWMAVLGLVGMIGSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|315500563|ref|YP_004089365.1| cytochrome o ubiquinol oxidase, subunit I [Asticcacaulis
           excentricus CB 48]
 gi|315418575|gb|ADU15214.1| cytochrome o ubiquinol oxidase, subunit I [Asticcacaulis
           excentricus CB 48]
          Length = 675

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP+H++QIFTAHGVIMIFFVAMP V G++N I+
Sbjct: 84  MLLRGFADALMMRAQQALASAGGAGFLPPDHFDQIFTAHGVIMIFFVAMPFVIGLMNVIM 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW T+ GA+L+ +SL IGEFA TGWL Y PLSG+  SPGVGV
Sbjct: 144 PLQIGARDVAFPYLNSLSFWFTAAGAVLINVSLVIGEFAHTGWLAYAPLSGLQFSPGVGV 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W++QI+GIGT LSG+N+IATI KMRAPGM LM MP+FTWT L  NILIVAAFP+LT
Sbjct: 204 DYYLWAIQISGIGTTLSGVNLIATIFKMRAPGMTLMRMPVFTWTTLAANILIVAAFPILT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN MMYVNLIW WGHPEVYILVLP FGIFSE+V+TF  
Sbjct: 264 VTLALLGLDRYLGMHFFTNDGGGNAMMYVNLIWAWGHPEVYILVLPAFGIFSEIVATFCR 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MVYAT+ I +LS+IVWLHHFFTMG+GANVNAFFGI+TMIISIPTG K+FNWL
Sbjct: 324 KRLFGYDAMVYATMCIAILSFIVWLHHFFTMGAGANVNAFFGISTMIISIPTGVKVFNWL 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R EVP+LWT+GF+ITFVIGG  GV+LA+P A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 384 FTMYRGRVRLEVPMLWTMGFIITFVIGGATGVMLAIPGADFVLHNSVFLIAHFHNVIIGG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+NYWFPKAFG++L    GK SFW WLIGFYVAFMPLY LG MG+TRR+SH +
Sbjct: 444 VLFGCIAGLNYWFPKAFGFRLHSGIGKVSFWCWLIGFYVAFMPLYALGLMGMTRRLSHMD 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +AA G L+I  GI++ I+Q+  S  KR  L D +GDPW+GRTLEW+TSSPP
Sbjct: 504 NPVWHQYLIVAAIGALIIFAGIIAQIVQIGYSIWKRDELRDDSGDPWDGRTLEWATSSPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D++W  K+    + + K ++ I MP+NT  G+LI + S+  GFALV
Sbjct: 564 PFYNFAVTPAIGNHDAFWDAKQTGQAYIQPKAYEPIHMPRNTATGLLIGLASISFGFALV 623

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L +++ I  + + I  TFN  R+YY+  +EI  IE  R
Sbjct: 624 WHIWWLAVVTLIGMIGLAILQTFNEDRDYYVQPDEIKAIEDAR 666


>gi|238754227|ref|ZP_04615584.1| Ubiquinol oxidase subunit 1 [Yersinia ruckeri ATCC 29473]
 gi|238707474|gb|EEP99834.1| Ubiquinol oxidase subunit 1 [Yersinia ruckeri ATCC 29473]
          Length = 648

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 466/583 (79%), Gaps = 3/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 51  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSGI  +PGVGV
Sbjct: 111 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGIEYNPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT
Sbjct: 171 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 231 VTVALLTLDRYMGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIQFNSAMLWTVGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 411 VVFGCFAGLTYWFPKSFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           +        +AA G +LIA GIL  +IQ+ VS R R      D+TGDPW+ RTLEWSTSS
Sbjct: 471 NPEFHPMLMVAAGGAVLIACGILCQVIQVFVSVRDRDREQNRDLTGDPWDARTLEWSTSS 530

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA
Sbjct: 531 PPPFYNFAVVPEVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAAFSLIFGFA 590

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           +VWH+W + I  F+  ++  I  +F+   +YY+ +EE+  IE 
Sbjct: 591 MVWHIWWMAIAGFVGMIVTWIVKSFDEDVDYYVPAEEVERIEN 633


>gi|390568238|ref|ZP_10248548.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
 gi|389939928|gb|EIN01747.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
          Length = 667

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/586 (63%), Positives = 462/586 (78%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG S GYLPP HY+QIFTAHGVIMIFFVA PL+ G++N +V
Sbjct: 68  MLLRGFADAIMMRAQQAVAFGDSAGYLPPHHYDQIFTAHGVIMIFFVATPLILGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PF+N+L FW+++ GA+LVMIS+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQIGARDVAYPFVNSLGFWLSAVGAVLVMISMFVGDFAATGWVAYPPLSELGYSPTTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GT LSGIN I TI++MRAPG+ LM MP+F WTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQVSGLGTTLSGINFIVTILRMRAPGLNLMKMPVFCWTALITNILIVAVFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T+DRY+  HFFTN+LGGN MMY+NLIW+WGHPEVYIL+LP FG FSE++STFS 
Sbjct: 248 GTLALLTMDRYLDMHFFTNELGGNAMMYINLIWVWGHPEVYILILPAFGAFSEIISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IIS+PTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISVPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRYHTSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI+YWFPK FG+ L+ FWGK +FW WL+G+++AF PLYILGF G+TRRM+H+ 
Sbjct: 428 VVFGCLAGISYWFPKVFGFTLDEFWGKVAFWCWLVGYWLAFTPLYILGFQGMTRRMNHYS 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +A  G ++I MGIL+ +IQ  VS RKR    D+TGDPW+ R+LEWST+SP 
Sbjct: 488 VAEWHPWLIVALVGAVIIGMGILALLIQFAVSIRKREQYQDLTGDPWDARSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P+I   +  W  K++   +  P  K++DI MP+NT  G +IS FSL+ GFA+
Sbjct: 548 PFYNFAHVPVITSLEQHWDNKQSGSAYARPTKKYEDIHMPRNTAAGFIISAFSLLFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VWHMW+  I++ I  +   I  +++   +YY+ + E+  IE  R R
Sbjct: 608 VWHMWVFAIVALIGMIGTFIARSYDQDVDYYVPAAEVERIENARYR 653


>gi|261314739|ref|ZP_05953936.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           M163/99/10]
 gi|261303765|gb|EEY07262.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           M163/99/10]
          Length = 660

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/586 (65%), Positives = 472/586 (80%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIAT-IIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           DYY+W+L I+G+GTLLS +N+I T IIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+L
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPIL 247

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T  L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS
Sbjct: 248 TVTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFS 307

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
            KRLFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNW
Sbjct: 308 GKRLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNW 367

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII 
Sbjct: 368 LFTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIIS 427

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GVLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H 
Sbjct: 428 GVLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHT 487

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSS 478
           E+ +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SS
Sbjct: 488 ENPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA+
Sbjct: 548 PPPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 IWHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 653


>gi|420249437|ref|ZP_14752681.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. BT03]
 gi|398063841|gb|EJL55549.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. BT03]
          Length = 667

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/586 (63%), Positives = 462/586 (78%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++FG S GYLPP HY+QIFTAHGVIMIFFVA PL+ G++N +V
Sbjct: 68  MLLRGFADAIMMRAQQAVAFGDSAGYLPPHHYDQIFTAHGVIMIFFVATPLILGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PF+N+L FW+++ GA+LVMIS+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQIGARDVAYPFVNSLGFWLSAVGAVLVMISMFVGDFAATGWVAYPPLSELGYSPTTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GT LSGIN I TI++MRAPG+ LM MP+F WTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQVSGLGTTLSGINFIVTILRMRAPGLNLMKMPVFCWTALITNILIVAVFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T+DRY+  HFFTN+LGGN MMY+NLIW+WGHPEVYIL+LP FG FSE++STFS 
Sbjct: 248 GTLALLTMDRYLDMHFFTNELGGNAMMYINLIWVWGHPEVYILILPAFGAFSEIISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IIS+PTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISVPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRYHTSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI+YWFPK FG+ L+ FWGK +FW WL+G+++AF PLYILGF G+TRRM+H+ 
Sbjct: 428 VVFGCLAGISYWFPKVFGFTLDEFWGKVAFWCWLVGYWLAFTPLYILGFQGMTRRMNHYS 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +A  G ++I MGIL+ +IQ  VS RKR    D+TGDPW+ R+LEWST+SP 
Sbjct: 488 VAEWHPWLIVALVGAVIIGMGILALLIQFAVSIRKREQYQDLTGDPWDARSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P+I   +  W  K++   +  P  K++DI MP+NT  G +IS FSL+ GFA+
Sbjct: 548 PFYNFAHVPVITSLEQHWDNKQSGSAYARPTKKYEDIHMPRNTAAGFIISAFSLLFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VWHMW+  I++ I  +   I  +++   +YY+ + E+  IE  R R
Sbjct: 608 VWHMWVFAIVALIGMIGTFIARSYDQDVDYYVPAAEVERIENARYR 653


>gi|422023834|ref|ZP_16370336.1| ubiquinol oxidase polypeptide [Providencia sneebia DSM 19967]
 gi|414091849|gb|EKT53530.1| ubiquinol oxidase polypeptide [Providencia sneebia DSM 19967]
          Length = 663

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/583 (65%), Positives = 468/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N IATII+MRAPGM +M MP+F+W ALCTN+LIVAAFP+LT
Sbjct: 188 DYWLWSLQISGIGTLLTGVNFIATIIRMRAPGMSMMKMPVFSWAALCTNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTLTLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITIMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW++GF++AFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGFTLNEKWGVRAFWFWIVGFFLAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D         AA G  LIA+GI   +IQ+IVS R RH  +D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPEYHSMLVAAACGAGLIALGIACQVIQIIVSIRDRHQNLDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D+WW MK+    + K   +++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAIEPNVQTRDAWWDMKEKGIAYKKPTSYEEIHMPKNTGAGVIIAAFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE KR
Sbjct: 608 WHIWWLAIVGFGGMIVTWIVKSFDEDVDYYVPVAEIEKIETKR 650


>gi|344172597|emb|CCA85241.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia syzygii R24]
          Length = 659

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/584 (65%), Positives = 461/584 (78%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAIMMRSQLALASGGGTGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +L+ +SL +GEFA TGWL YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLINVSLGVGEFARTGWLAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMR PGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRVPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNTAGGNPMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVWATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL+  WGK +FW W +GFY AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITYWFPKAFGFKLDEKWGKRAFWCWFVGFYTAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ+ VS R RH L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVIGAAIIACGIASQLIQIFVSIRNRHALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P+I   D++  MK    + P      ++ I MPKNT  G  I +FS++MGFA
Sbjct: 548 AHYNFASVPVIRDIDAFADMKARG-EVPTQVAASYEKIHMPKNTGAGFFIGMFSIVMGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W + ++  +  +   I+ + N   +YY+ ++E+   E  
Sbjct: 607 LIWHIWWMAVLGLVGMIGSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|183601053|ref|ZP_02962546.1| hypothetical protein PROSTU_04675 [Providencia stuartii ATCC 25827]
 gi|386742745|ref|YP_006215924.1| ubiquinol oxidase polypeptide [Providencia stuartii MRSN 2154]
 gi|188019392|gb|EDU57432.1| cytochrome o ubiquinol oxidase, subunit I [Providencia stuartii
           ATCC 25827]
 gi|384479438|gb|AFH93233.1| ubiquinol oxidase polypeptide [Providencia stuartii MRSN 2154]
          Length = 663

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 469/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N IATII+MRAPGM +M MP+F+W ALCTN+LIVAAFP+LT
Sbjct: 188 DYWLWSLQISGIGTLLTGVNFIATIIRMRAPGMSMMKMPVFSWAALCTNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTLTLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITVMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWT+GF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKSPMLWTVGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+ GF++AFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAYGFTLNEKWGVRAFWFWITGFFLAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      +AA G  LIA+GIL  +IQ+IVS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPAYHTMLVVAACGAGLIALGILCQVIQIIVSIRDRHANRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D+WW MK+      +  K+++I MPKNT  G++I+ FSL++GFA++
Sbjct: 548 PFYNFAIEPNIQTRDAWWDMKEKGTAHKRPAKYEEIHMPKNTGAGVIIAAFSLVLGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 608 WHIWWLAIVGFAGMIVTWIAKSFDEDVDYYVPVAEIEQIENKHFE 652


>gi|296101552|ref|YP_003611698.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295056011|gb|ADF60749.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 663

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R+   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMVAAGGAALIACGILCQLIQYYVSIRDRNLNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + + D +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHIHERDAFWEMKEKGEAYKQPDHYEEIHMPKNSAAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|91775647|ref|YP_545403.1| cytochrome-c oxidase [Methylobacillus flagellatus KT]
 gi|91709634|gb|ABE49562.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Methylobacillus
           flagellatus KT]
          Length = 659

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/587 (64%), Positives = 471/587 (80%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + G+LPP HY+QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFADAIMMRGQLAVASGGAEGFLPPHHYDQIFTAHGVIMIFFMAMPFMVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+ ISL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFVVGVALINISLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N   TI+KMRAPGM LM MP+FTWTALCTNILI+AAFPVLT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFVTIMKMRAPGMTLMKMPVFTWTALCTNILILAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+GTHFFTND+GGN MMYVNLIWIWGHPEVYIL+LP FGIFSEVV+TF+ 
Sbjct: 248 ATIALLTLDRYLGTHFFTNDMGGNQMMYVNLIWIWGHPEVYILILPAFGIFSEVVATFTK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT  IT+LS+IVWLHHFFTMG+GANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATAAITILSFIVWLHHFFTMGAGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  PI+WTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFSTPIIWTIGFLITFTIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G  YWFPKAFG+KL    G+ + + W+ GF++AF+PLY+ GFMG+TRR+++++
Sbjct: 428 VVFGYLAGFTYWFPKAFGFKLNEKLGRIAAYLWISGFFLAFIPLYMAGFMGMTRRLNNYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +      +A  G  +I   I+  ++Q+ VS R R   +D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPAWTPMMYVALVGAFIIGAAIVVQLVQIYVSIRDRKQNLDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P++   D WW MK++    K P  K++ I MPKN + G++IS FSL+ GFA 
Sbjct: 548 PFYNFAHVPVVKDLDEWWEMKQDGRATKAPA-KYEKIHMPKNASEGVIISAFSLVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L I+S I  L+ VI  ++N   +YY+  EE+T IE K +++
Sbjct: 607 IWHIWWLVILSTIAMLVTVIARSYNEDIDYYVPVEEVTAIENKHLQI 653


>gi|254523291|ref|ZP_05135346.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas sp.
           SKA14]
 gi|219720882|gb|EED39407.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas sp.
           SKA14]
          Length = 667

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/585 (64%), Positives = 465/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 69  MLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 129 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 189 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 249 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 309 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR++F  P+LWTIGFM+TF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 369 FTMFRGRVQFTTPVLWTIGFMVTFTIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 429 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    +AA G  ++  GIL  IIQ+ VS R R    D+TGDPW+ RTLEW TSSPP
Sbjct: 489 NPAYEPLLLVAAAGAFIVGAGILCQIIQVAVSIRDRKKTADLTGDPWDARTLEWETSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 549 AFYNFGTLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 609 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 653


>gi|307129921|ref|YP_003881937.1| cytochrome o ubiquinol oxidase subunit I [Dickeya dadantii 3937]
 gi|306527450|gb|ADM97380.1| cytochrome o ubiquinol oxidase subunit I [Dickeya dadantii 3937]
          Length = 663

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAVMMR QQ ++     G+L P HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMLRGFADAVMMRGQQVLASAGEAGFLNPHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL IGEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVILINLSLGIGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGVGTTLTGVNFFATIMKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGI+SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHSAMLWTTGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G  LIA+G+L  IIQ  VS R R    D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPEFHPLLVVASIGAGLIALGVLCQIIQFAVSIRDRDQNRDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I + D++W +K+    + K  ++++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHIQERDAFWEIKEKGDAYRKPAQYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W++W L II F+  +   I ++FN   +YY+  +E+  IE + 
Sbjct: 608 WYIWWLAIIGFVGMVATWIVHSFNQDVDYYVPVKEVEQIENQN 650


>gi|194364919|ref|YP_002027529.1| cytochrome o ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia R551-3]
 gi|194347723|gb|ACF50846.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas
           maltophilia R551-3]
          Length = 665

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/585 (64%), Positives = 465/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G S GYLPP HY+QIFTAHGVIMIFFVAMPL+TG++N  V
Sbjct: 67  MLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPLITGLMNLAV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+   GA+L+M+SL+IGEFA+TGWL +PPLSGI  SP VG+
Sbjct: 127 PLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLWIGEFAATGWLAFPPLSGIEYSPSVGM 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQ+AG+GT LSGIN   TI+KMR P MKLM MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 187 DYYIWGLQVAGLGTTLSGINFFITILKMRTPSMKLMQMPVFTWTALVTNVLIVAAFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND GGN M+Y+NLIWIWGHPEVYILVLP FG+FSEV++TFS 
Sbjct: 247 ITLVLLTLDRYLGTHFFTNDGGGNAMLYINLIWIWGHPEVYILVLPAFGVFSEVIATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 307 KALFGYKGMVYATACIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR++F  P+LWTIGFM+TF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMFRGRVQFTTPVLWTIGFMVTFTIGGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI YW+PK FG++L  FWGKC+FW W IGFYV FMP+Y+LGFMG+TRR+    
Sbjct: 427 VVFGMFAGITYWWPKMFGFRLNEFWGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTV 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + +    +AA G  ++  GIL  IIQ+ VS R R    D+TGDPW+ RTLEW TSSPP
Sbjct: 487 NPAYEPLLLVAAAGAFIVGAGILCQIIQVAVSIRDRKKTADLTGDPWDARTLEWETSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNF  +P + + D +W  K+    +PK  K+ DI MP+NT  G++I  FSL+ GFA++
Sbjct: 547 AFYNFGSLPEVTELDDFWERKQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F+  +   IY TF+   +Y++ + E+  IE +  +
Sbjct: 607 WHIWWLAIVGFVGMIATFIYRTFDQDVDYWVPAAEVERIENEHRK 651


>gi|387890175|ref|YP_006320473.1| cytochrome o ubiquinol oxidase subunit I [Escherichia blattae DSM
           4481]
 gi|414595529|ref|ZP_11445148.1| cytochrome o ubiquinol oxidase subunit I [Escherichia blattae NBRC
           105725]
 gi|386925008|gb|AFJ47962.1| cytochrome o ubiquinol oxidase subunit I [Escherichia blattae DSM
           4481]
 gi|403193492|dbj|GAB82800.1| cytochrome o ubiquinol oxidase subunit I [Escherichia blattae NBRC
           105725]
          Length = 663

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQA++     G+LPP HY+Q+FTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQALASAGEAGFLPPHHYDQVFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++G+GT L+GIN   TI+KMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGVGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+V+TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV ITLLS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITLLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIIFNSAMLWTIGFIVTFTVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFGY L   WGK +FW W+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGYTLNETWGKRAFWCWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  IIQ+IVS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLIVAACGAALIALGILCLIIQIIVSVRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D +W MK+    + +  +++++ MP+N+  G++I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVDERDEFWEMKEKGTAYKQPARYEEVHMPRNSAAGMVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWLAIVGFAGIVVTWIVKSFDEDVDYYVPVAEVEKIENQH 650


>gi|365969254|ref|YP_004950815.1| ubiquinol oxidase subunit I [Enterobacter cloacae EcWSU1]
 gi|401762526|ref|YP_006577533.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. cloacae ENHKU01]
 gi|365748167|gb|AEW72394.1| Ubiquinol oxidase subunit 1 [Enterobacter cloacae EcWSU1]
 gi|400174060|gb|AFP68909.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. cloacae ENHKU01]
          Length = 663

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G +LIA GI S +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMVAAGGAVLIACGIASQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|261316703|ref|ZP_05955900.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           B2/94]
 gi|265987773|ref|ZP_06100330.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           M292/94/1]
 gi|340789673|ref|YP_004755137.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           B2/94]
 gi|261295926|gb|EEX99422.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           B2/94]
 gi|264659970|gb|EEZ30231.1| cytochrome o ubiquinol oxidase subunit I [Brucella pinnipedialis
           M292/94/1]
 gi|340558131|gb|AEK53369.1| cytochrome o ubiquinol oxidase, subunit I [Brucella pinnipedialis
           B2/94]
          Length = 660

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/586 (64%), Positives = 471/586 (80%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIAT-IIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           DYY+W+L I+G+GTLLS +N+I T IIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+L
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPIL 247

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T  L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS
Sbjct: 248 TVTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFS 307

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
            K LFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNW
Sbjct: 308 GKHLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNW 367

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII 
Sbjct: 368 LFTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIIS 427

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GVLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H 
Sbjct: 428 GVLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHT 487

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSS 478
           E+ +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SS
Sbjct: 488 ENPAWHIYLIIAAIGVAVILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA+
Sbjct: 548 PPPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 IWHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 653


>gi|392977869|ref|YP_006476457.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. dissolvens SDM]
 gi|392323802|gb|AFM58755.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. dissolvens SDM]
          Length = 663

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G +LIA GI S +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMVAAGGAVLIACGIASQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|354722302|ref|ZP_09036517.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter mori LMG
           25706]
          Length = 663

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G +LIA GI S ++Q  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMVAAGGAVLIACGIASQLVQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPQIHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|401678828|ref|ZP_10810782.1| CyoB Protein [Enterobacter sp. SST3]
 gi|400213924|gb|EJO44856.1| CyoB Protein [Enterobacter sp. SST3]
          Length = 663

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G +LIA GI S +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMVAAGGAVLIACGIASQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|299065534|emb|CBJ36705.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia solanacearum
           CMR15]
          Length = 661

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/584 (65%), Positives = 461/584 (78%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 70  MLLRGFADAVMMRSQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +LV +SL +G FA TGWL YPPLS +A SP VGV
Sbjct: 130 PLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELAYSPDVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWT+LC+ IL+VAAFPVLT
Sbjct: 190 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTSLCSMILVVAAFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN+LGGN M+YVNLIWIWGHPEVYILVLP FG+FSE+VSTFS 
Sbjct: 250 VALALLGADRYLDMHFFTNELGGNAMLYVNLIWIWGHPEVYILVLPAFGMFSEIVSTFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 310 KKLFGYTSMVYATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL+  WGK +FW W +GFY AFMPLY+LGFMG+TRR++H +
Sbjct: 430 VVFGYLAGITYWFPKAFGFKLDEKWGKRAFWCWFVGFYTAFMPLYVLGFMGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ+ VS R RH L D+TGDPW GRTLEW+TSSPP
Sbjct: 490 NAAWQPWLIVAVIGAAIIACGIASQLIQIFVSIRNRHALADVTGDPWGGRTLEWATSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNF  +P++   D++  MK    + P     +++ I MPKNT  G  I +FS++MGFA
Sbjct: 550 AHYNFPTLPVVRDIDAFADMKARG-EVPTQVAARYEKIHMPKNTGAGFFIGMFSIVMGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W + ++  +  +   I  + N   +YY+ ++E+   E  
Sbjct: 609 LIWHIWWMAVLGLVGMIGSFILRSNNDDIDYYVPAQEVHETESA 652


>gi|440288758|ref|YP_007341523.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein
           [Enterobacteriaceae bacterium strain FGI 57]
 gi|440048280|gb|AGB79338.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein
           [Enterobacteriaceae bacterium strain FGI 57]
          Length = 663

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITILSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FW W+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWLWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTMLVVAACGAALIALGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ I GFA++
Sbjct: 548 PFYNFAIVPQIHERDAFWEMKEKGEAYKQPTQYEEIHMPKNSGAGIVIAAFATIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVAEVEKLENQH 650


>gi|407789453|ref|ZP_11136554.1| cytochrome-c oxidase [Gallaecimonas xiamenensis 3-C-1]
 gi|407206811|gb|EKE76761.1| cytochrome-c oxidase [Gallaecimonas xiamenensis 3-C-1]
          Length = 659

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 469/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + G+LPPEHY+QIFTAHGVIMI F+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASGGNEGFLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN++SFW+   G  LV ISL +GEFA+TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSVSFWLFVVGVALVNISLGVGEFATTGWVAYPPLSGKEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N  ATI+K+RAPGMKLM MPIFTWT LCT+++I+AAFP+LT
Sbjct: 188 DYYIWALQISGIGTTLTGVNFFATILKLRAPGMKLMQMPIFTWTILCTSVIIMAAFPMLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + +LDRY+  HFFTN LGG+ M+YVNLIW WGHPEVYIL+LP FGIFSEV+STFS+
Sbjct: 248 VALAMLSLDRYLDFHFFTNALGGSPMLYVNLIWAWGHPEVYILILPAFGIFSEVISTFST 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYATV IT+LS++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYKSMVYATVAITVLSFVVWLHHFFTMGAGANVNAFFGIATMIIAIPTGLKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++F  P++WT+GF+ITF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVQFTAPVMWTLGFIITFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ +WFPKAFG+KL    G  SFW W +GFY+AF+PLY+LGFMG+TRR++H++
Sbjct: 428 VVFGYLAGLTFWFPKAFGFKLNDKLGHASFWCWFVGFYLAFIPLYVLGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +AA G  +IA+GI   +IQLIVSYR+RH   D+TGDPWNGRTLEWS  SPP
Sbjct: 488 NPAWTPWLIVAAIGAFVIALGIAFQVIQLIVSYRQRHENRDLTGDPWNGRTLEWSIPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P++H+ D+WW  K+    + K   ++ I MPKNT+ G+ I +FSLI GFALV
Sbjct: 548 AFYNFAHTPVVHELDAWWDEKEKGTAYAKPASYEPIHMPKNTSAGVYIGLFSLIGGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+  +  L  +I  +F    +YY+  +EI  IE   
Sbjct: 608 WHIWWMVILGVVGVLGTMIVRSFVKDVDYYVQVDEIEQIESAH 650


>gi|345298106|ref|YP_004827464.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter asburiae
           LF7a]
 gi|345092043|gb|AEN63679.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter asburiae
           LF7a]
          Length = 663

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G +LIA GI   +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAVLIACGIACQLIQYYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQIHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   LI  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGILISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|157146953|ref|YP_001454272.1| hypothetical protein CKO_02730 [Citrobacter koseri ATCC BAA-895]
 gi|157084158|gb|ABV13836.1| hypothetical protein CKO_02730 [Citrobacter koseri ATCC BAA-895]
          Length = 663

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/583 (64%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA+GIL  +IQ+ VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHPMLLIAACGAALIALGILCQLIQIFVSIRDREQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ FS I GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|429122497|ref|ZP_19183074.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter sakazakii
           680]
 gi|426322965|emb|CCK13811.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter sakazakii
           680]
          Length = 646

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/585 (64%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 51  MLVRGFADAIMMRTQQLLAASGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 171 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 231 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 411 VVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 471 DPMFQPLMIVAEIGALLIACGILCIILQIYVSIRDRHLNRDLTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MPKN+  GI I  FS I GFA++
Sbjct: 531 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPKNSAAGIFIGAFSTIFGFAMI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 591 WHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 635


>gi|423118956|ref|ZP_17106640.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5246]
 gi|376399602|gb|EHT12216.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5246]
          Length = 663

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++H+ D++W MK+    + K   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPVVHERDAFWEMKEKGEAYKKPAGYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SF+  L+  I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWMAIASFVGILVTWIIKSFDEDVDYYVPVAVVEKLENQH 650


>gi|242240299|ref|YP_002988480.1| cytochrome o ubiquinol oxidase subunit I [Dickeya dadantii Ech703]
 gi|242132356|gb|ACS86658.1| cytochrome o ubiquinol oxidase, subunit I [Dickeya dadantii Ech703]
          Length = 663

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/585 (64%), Positives = 464/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFFVA P V G++N +V
Sbjct: 68  MMLRGFADAIMMRGQQVLASAGEAGFLNPHHYDQIFTAHGVIMIFFVATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL IGEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVVLINLSLGIGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGVGTTLTGVNFFATILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHTSMLWTTGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKA G+ L   WGK +FWFWLIGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKALGFTLNETWGKRAFWFWLIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+FG +LIA+GIL  +IQ +VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPEFHPLLVVASFGVVLIAIGILCQVIQYVVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I + D++W  K+    + K  K+++I MPKNT  G++IS FSL  GFA++
Sbjct: 548 PFYNFAIVPQISERDAFWDAKEKGDAYRKPAKYEEIHMPKNTGAGVIISAFSLAFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++W L II F+  +   I ++FN   +YY+  +EI  IE +   
Sbjct: 608 WYIWWLAIIGFVGMIATWIVHSFNQNVDYYVPVKEIEDIENQHFE 652


>gi|296533146|ref|ZP_06895775.1| bo3-type quinol oxidase, subunit I [Roseomonas cervicalis ATCC
           49957]
 gi|296266518|gb|EFH12514.1| bo3-type quinol oxidase, subunit I [Roseomonas cervicalis ATCC
           49957]
          Length = 662

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/584 (63%), Positives = 465/584 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFADALMMRLQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPFIVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GAILV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLTAAGAILVNISLGVGEFARTGWLAYPPLSGLDYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+NMI TI++MRAPGM +  MPIF WT+LC N+LIVAAFP+LT
Sbjct: 188 DYYLWALQISGLGTLLAGVNMIVTILQMRAPGMTMFRMPIFAWTSLCANMLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L  LDRY GTHFFTN+ GGN MMY+NL+W WGHPEVYIL+LPVFG+FSE+VSTFSS
Sbjct: 248 VVLALLGLDRYAGTHFFTNEAGGNAMMYINLVWAWGHPEVYILILPVFGVFSEIVSTFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV+ATV IT+LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG K+FNWL
Sbjct: 308 KRLFGYHAMVWATVCITVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RF+ P+LWTIGF+ITFVIGGM GV++A+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVRFDTPVLWTIGFIITFVIGGMTGVLMALPPVSFVLHNSLFLIAHFHNAIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKA G++L    G+ +FW W++GFY+AFMPLYILGF+G+TRR++H +
Sbjct: 428 VVFGCFAGFTYWFPKATGFRLHEGLGRKAFWCWIVGFYLAFMPLYILGFLGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +AAFG L+I  GIL  I Q++VS R+R +L D+TGDPW GRTLEW+ +SPP
Sbjct: 488 NPLWQPYLYVAAFGALVILCGILFQIAQIVVSIRQRESLRDLTGDPWGGRTLEWAIASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P +   D++W MK       ++ F  I MP NT  GI+I  FS+++GFALVW
Sbjct: 548 PFYNFAETPQVRDIDAYWDMKAQGLSPKREDFHPIHMPSNTPTGIVIGGFSVVLGFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W +  +     ++  I +++     + + +  +   E    R
Sbjct: 608 HIWWMAGLGLAGMVLSAITHSWFEHHGHEVPAALVARTEAAHAR 651


>gi|156935020|ref|YP_001438936.1| hypothetical protein ESA_02871 [Cronobacter sakazakii ATCC BAA-894]
 gi|389841954|ref|YP_006344038.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter sakazakii
           ES15]
 gi|417792003|ref|ZP_12439415.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter sakazakii
           E899]
 gi|449309244|ref|YP_007441600.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter sakazakii
           SP291]
 gi|156533274|gb|ABU78100.1| hypothetical protein ESA_02871 [Cronobacter sakazakii ATCC BAA-894]
 gi|333953891|gb|EGL71781.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter sakazakii
           E899]
 gi|387852430|gb|AFK00528.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter sakazakii
           ES15]
 gi|449099277|gb|AGE87311.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter sakazakii
           SP291]
          Length = 663

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/585 (64%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLVRGFADAIMMRTQQLLAASGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 428 VVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPMFQPLMIVAEIGALLIACGILCIILQIYVSIRDRHLNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MPKN+  GI I  FS I GFA++
Sbjct: 548 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPKNSAAGIFIGAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 608 WHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 652


>gi|421724884|ref|ZP_16164089.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella oxytoca M5al]
 gi|410374318|gb|EKP28994.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella oxytoca M5al]
          Length = 663

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++H+ D++W MK+    + K   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPVVHERDAFWEMKEKGDAYKKPAGYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF+  L   I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWLAIASFVGILATWIIKSFDEDVDYYVPVAVVEKLENQH 650


>gi|402843171|ref|ZP_10891573.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella sp. OBRC7]
 gi|423101602|ref|ZP_17089304.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5242]
 gi|376391390|gb|EHT04069.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5242]
 gi|402277802|gb|EJU26870.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella sp. OBRC7]
          Length = 663

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++H+ D++W MK+    + K   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPVVHERDAFWEMKEKGDAYKKPAGYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SF+  L+  I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWMAIASFVGILVTWIIKSFDEDVDYYVPVAVVEKLENQH 650


>gi|304414864|ref|ZP_07395782.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Regiella
           insecticola LSR1]
 gi|304283133|gb|EFL91547.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Regiella
           insecticola LSR1]
          Length = 678

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/598 (62%), Positives = 466/598 (77%), Gaps = 16/598 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA+S     G+LPP HY+QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALSSAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFIVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ ISL +GEFA TGWL YPPLS    +PGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFVVGVLLINISLGVGEFAQTGWLAYPPLSAKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI++MRAPGM +M MP+FTWTALC+NILI+ AFP+LT
Sbjct: 188 DYWIWSLQISGLGTLLAGVNFFATILRMRAPGMSMMQMPVFTWTALCSNILIIVAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP FGIFSEV +TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPAFGIFSEVTATFCR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITILSFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTIGFIVTFTVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L+  WG  +FWFWL+GF+VAFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLDEKWGIRAFWFWLVGFFVAFMPLYILGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A  G LLIA GIL  +IQ+ VS R R    D+TGDPWN RTLEW+TSSPP
Sbjct: 488 NPEFHPMLMVATGGALLIACGILCQLIQIFVSIRDREKNRDLTGDPWNARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP----------------KDKFQDILMPKNTNIG 524
           P YNFA +P IH  D +W MK+N   +P                  K++ I MPKNT  G
Sbjct: 548 PFYNFALVPKIHDRDEFWRMKENAEAYPFLASPDTTKSDVIKPNSAKYEPIHMPKNTGAG 607

Query: 525 ILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           ++I+ FSLI GFA++W++W L I+  I  ++  I  +F+   +YY+  +E+  IE + 
Sbjct: 608 VIIAGFSLIFGFAMIWYIWWLAIVGLIGAMVTWIIKSFDEDVDYYVPIDEVARIESQH 665


>gi|270263564|ref|ZP_06191833.1| hypothetical protein SOD_e01880 [Serratia odorifera 4Rx13]
 gi|421781982|ref|ZP_16218442.1| cytochrome o ubiquinol oxidase, subunit I [Serratia plymuthica A30]
 gi|270042448|gb|EFA15543.1| hypothetical protein SOD_e01880 [Serratia odorifera 4Rx13]
 gi|407755856|gb|EKF65979.1| cytochrome o ubiquinol oxidase, subunit I [Serratia plymuthica A30]
          Length = 663

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIMKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHPLLLVAAGGAALIACGILCQLIQIFVSVRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K  K++ I MPKNT  G++I+ FSL+ GFA++
Sbjct: 548 PFYNFAVVPQIHDRDEFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIAGFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + I +F+  ++  I  +F+   +YY+  +EI  IE + 
Sbjct: 608 WDIWWMAIAAFVGMIVTWIAKSFDEDVDYYVQVDEIERIENQH 650


>gi|206578173|ref|YP_002240090.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           342]
 gi|288936840|ref|YP_003440899.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella variicola
           At-22]
 gi|206567231|gb|ACI09007.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella pneumoniae
           342]
 gi|288891549|gb|ADC59867.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella variicola
           At-22]
          Length = 663

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SFI  +   I  +F+   +YY+   E+  +EK+ 
Sbjct: 608 WHIWWMAIASFIGIVATWIIKSFDEDVDYYVPVAEVEKLEKQH 650


>gi|146310559|ref|YP_001175633.1| cytochrome-c oxidase [Enterobacter sp. 638]
 gi|145317435|gb|ABP59582.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Enterobacter
           sp. 638]
          Length = 663

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++Q++GIGT L+GIN   TIIKMRAPGM +  MP+FTW +LC NILI+A+FP+LT
Sbjct: 188 DYWIWAIQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFTWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFGY L   WGK +FW W+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGYTLNETWGKRAFWLWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G +LIA GI   +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVIAACGAVLIACGIACQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + + + +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQIHERDAFWEMKEKGEAYKQPEHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGVIISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|335043936|ref|ZP_08536961.1| heme/copper-type cytochrome/quinol oxidase, subunit 1 [Methylophaga
           aminisulfidivorans MP]
 gi|333787182|gb|EGL53066.1| heme/copper-type cytochrome/quinol oxidase, subunit 1 [Methylophaga
           aminisulfidivorans MP]
          Length = 674

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/582 (65%), Positives = 476/582 (81%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G++ GYLPPEHY+QIFTAHGVIMIFFVAMP V G+IN +V
Sbjct: 68  MLLRGFSDAIMMRSQQAVALGANQGYLPPEHYDQIFTAHGVIMIFFVAMPFVIGLINIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN++SFW+   G ILV +SL +G+FA TGWL YPPLS +  SP VGV
Sbjct: 128 PLQIGARDVAFPYLNSVSFWLFVVGVILVNLSLAVGDFAKTGWLAYPPLSELNYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GTLL+GIN   TIIKMRAPGM LM MPIF+W ALCTN LIV AFPVLT
Sbjct: 188 DYYIWSLQISGLGTLLTGINFFVTIIKMRAPGMTLMKMPIFSWAALCTNALIVGAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN +GG++MMY+NLIWIWGHPEVYILVLPVFG+FSEVV+T+S 
Sbjct: 248 VTLALLTLDRYLGMHFFTNAMGGDMMMYINLIWIWGHPEVYILVLPVFGVFSEVVATYSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYAT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KPLFGYTSMVYATIAITILSFIVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F  P+LWT+GFMITF IGGM GV+L+VP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYGGRVEFSSPLLWTLGFMITFSIGGMTGVLLSVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G  YWFPKAFG++L   WGK SFW W +GFY+AFMPLY LGF+G+TRR++H++
Sbjct: 428 VVFGSMAGYAYWFPKAFGFRLNERWGKYSFWAWFVGFYLAFMPLYYLGFLGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +AA G  +I +GI+  I+QL+VS R+RH  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPAFQPWLILAAVGAGIIMLGIIFTIVQLVVSIRERHANMDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP+  + D++  MK++    P+ K +++I MP+NT +G+ I +FSLI GFA++
Sbjct: 548 PFYNFAEIPVASELDAFHTMKESGDYPPEPKQYKEIHMPRNTGVGVFIGLFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           W++W + I   +  L  +I+ +F+   +YY+  EEI  IE +
Sbjct: 608 WYIWWMAIAGVVGILGCMIWRSFDNDVDYYVPVEEIERIEGE 649


>gi|152968966|ref|YP_001334075.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238893378|ref|YP_002918112.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|330011527|ref|ZP_08307113.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella sp. MS 92-3]
 gi|365138458|ref|ZP_09345142.1| ubiquinol oxidase subunit 1 [Klebsiella sp. 4_1_44FAA]
 gi|378977292|ref|YP_005225433.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae HS11286]
 gi|386033446|ref|YP_005953359.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           KCTC 2242]
 gi|402782124|ref|YP_006637670.1| cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae 1084]
 gi|419762096|ref|ZP_14288345.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae DSM 30104]
 gi|419973319|ref|ZP_14488744.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH1]
 gi|419978502|ref|ZP_14493798.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH2]
 gi|419983889|ref|ZP_14499038.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH4]
 gi|419989940|ref|ZP_14504914.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH5]
 gi|419995820|ref|ZP_14510625.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH6]
 gi|420000731|ref|ZP_14515389.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH7]
 gi|420007643|ref|ZP_14522136.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH8]
 gi|420013292|ref|ZP_14527603.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH9]
 gi|420018376|ref|ZP_14532573.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH10]
 gi|420024468|ref|ZP_14538481.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH11]
 gi|420030226|ref|ZP_14544053.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH12]
 gi|420035329|ref|ZP_14548993.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH14]
 gi|420041663|ref|ZP_14555159.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH16]
 gi|420047724|ref|ZP_14561040.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH17]
 gi|420053426|ref|ZP_14566604.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH18]
 gi|420058270|ref|ZP_14571283.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH19]
 gi|420064557|ref|ZP_14577366.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH20]
 gi|420070356|ref|ZP_14583008.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH21]
 gi|420076113|ref|ZP_14588586.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH22]
 gi|420084368|ref|ZP_14596628.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH23]
 gi|421908665|ref|ZP_16338500.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K26BO]
 gi|421918675|ref|ZP_16348190.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K28BO]
 gi|424829251|ref|ZP_18253979.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
 gi|424934802|ref|ZP_18353174.1| Cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KpQ3]
 gi|425078094|ref|ZP_18481197.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW1]
 gi|425080152|ref|ZP_18483249.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW2]
 gi|425088727|ref|ZP_18491820.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW3]
 gi|425090274|ref|ZP_18493359.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW5]
 gi|428149072|ref|ZP_18996904.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae ST512-K30BO]
 gi|428933617|ref|ZP_19007165.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           JHCK1]
 gi|428939237|ref|ZP_19012350.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           VA360]
 gi|449060073|ref|ZP_21737745.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           hvKP1]
 gi|150953815|gb|ABR75845.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238545694|dbj|BAH62045.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|328534144|gb|EGF60779.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella sp. MS 92-3]
 gi|339760574|gb|AEJ96794.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           KCTC 2242]
 gi|363654918|gb|EHL93791.1| ubiquinol oxidase subunit 1 [Klebsiella sp. 4_1_44FAA]
 gi|364516703|gb|AEW59831.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella pneumoniae
           subsp. pneumoniae HS11286]
 gi|397348791|gb|EJJ41889.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH1]
 gi|397351573|gb|EJJ44656.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH2]
 gi|397354940|gb|EJJ47966.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH4]
 gi|397366804|gb|EJJ59419.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH6]
 gi|397368461|gb|EJJ61067.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH5]
 gi|397372946|gb|EJJ65418.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH7]
 gi|397380241|gb|EJJ72426.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH9]
 gi|397384344|gb|EJJ76464.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH8]
 gi|397390333|gb|EJJ82243.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH10]
 gi|397399083|gb|EJJ90740.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH11]
 gi|397402047|gb|EJJ93659.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH12]
 gi|397408065|gb|EJJ99441.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH14]
 gi|397416564|gb|EJK07737.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH17]
 gi|397418200|gb|EJK09359.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH16]
 gi|397424211|gb|EJK15118.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH18]
 gi|397433263|gb|EJK23913.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH20]
 gi|397437311|gb|EJK27880.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH19]
 gi|397441738|gb|EJK32104.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH21]
 gi|397447624|gb|EJK37814.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH22]
 gi|397450254|gb|EJK40364.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH23]
 gi|397745014|gb|EJK92223.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae DSM 30104]
 gi|402542986|gb|AFQ67135.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae 1084]
 gi|405591073|gb|EKB64586.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW1]
 gi|405601819|gb|EKB74972.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW3]
 gi|405607077|gb|EKB80047.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW2]
 gi|405613958|gb|EKB86679.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW5]
 gi|407808989|gb|EKF80240.1| Cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae KpQ3]
 gi|410117456|emb|CCM81125.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K26BO]
 gi|410118942|emb|CCM90815.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K28BO]
 gi|414706670|emb|CCN28374.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
 gi|426304308|gb|EKV66455.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           VA360]
 gi|426304871|gb|EKV67005.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           JHCK1]
 gi|427540929|emb|CCM93042.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella pneumoniae
           subsp. pneumoniae ST512-K30BO]
 gi|448874281|gb|EMB09336.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella pneumoniae
           hvKP1]
          Length = 663

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVIAACGAALIACGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SFI  +   I  +F+   +YY+   E+  +EK+ 
Sbjct: 608 WHIWWMAIASFIGIVATWIIKSFDEDVDYYVPVAEVEKLEKQH 650


>gi|375259338|ref|YP_005018508.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella oxytoca KCTC
           1686]
 gi|397656319|ref|YP_006497021.1| cytochrome O ubiquinol oxidase subunit I [Klebsiella oxytoca E718]
 gi|423127769|ref|ZP_17115448.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5250]
 gi|365908816|gb|AEX04269.1| cytochrome o ubiquinol oxidase subunit I [Klebsiella oxytoca KCTC
           1686]
 gi|376394808|gb|EHT07458.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5250]
 gi|394344925|gb|AFN31046.1| Cytochrome O ubiquinol oxidase subunit I [Klebsiella oxytoca E718]
          Length = 663

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++H+ D++W MK+    + K   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPVVHERDAFWEMKEKGDAYKKPAGYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SF+  L   I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWMAIASFVGILATWIIKSFDEDVDYYVPVAVVEKLENQH 650


>gi|22124927|ref|NP_668350.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis KIM10+]
 gi|45440615|ref|NP_992154.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595301|ref|YP_069492.1| cytochrome o ubiquinol oxidase subunit I [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808650|ref|YP_652566.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Antiqua]
 gi|108811091|ref|YP_646858.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Nepal516]
 gi|145600059|ref|YP_001164135.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Pestoides
           F]
 gi|149364989|ref|ZP_01887024.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis
           CA88-4125]
 gi|153949620|ref|YP_001402059.1| cytochrome O ubiquinol oxidase subunit I [Yersinia
           pseudotuberculosis IP 31758]
 gi|162419691|ref|YP_001607427.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Angola]
 gi|165926614|ref|ZP_02222446.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165935966|ref|ZP_02224536.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011062|ref|ZP_02231960.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213121|ref|ZP_02239156.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399425|ref|ZP_02304949.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421634|ref|ZP_02313387.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423220|ref|ZP_02314973.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170025459|ref|YP_001721964.1| cytochrome o ubiquinol oxidase subunit I [Yersinia
           pseudotuberculosis YPIII]
 gi|186894318|ref|YP_001871430.1| cytochrome o ubiquinol oxidase subunit I [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930195|ref|YP_002348070.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis CO92]
 gi|229838770|ref|ZP_04458929.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229896076|ref|ZP_04511246.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis Pestoides
           A]
 gi|229899338|ref|ZP_04514481.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901318|ref|ZP_04516440.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis Nepal516]
 gi|270489506|ref|ZP_06206580.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis KIM D27]
 gi|294504895|ref|YP_003568957.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Z176003]
 gi|384123365|ref|YP_005505985.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis D106004]
 gi|384127216|ref|YP_005509830.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis D182038]
 gi|384138992|ref|YP_005521694.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis A1122]
 gi|420618304|ref|ZP_15108837.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-14]
 gi|420644459|ref|ZP_15132463.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-29]
 gi|420671052|ref|ZP_15156439.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-45]
 gi|420704173|ref|ZP_15185418.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-54]
 gi|420796363|ref|ZP_15266638.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-91]
 gi|420838597|ref|ZP_15304696.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-100]
 gi|421764668|ref|ZP_16201456.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis INS]
 gi|21957765|gb|AAM84601.1|AE013705_4 cytochrome o ubiquinol oxidase subunit I [Yersinia pestis KIM10+]
 gi|45435472|gb|AAS61031.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588583|emb|CAH20191.1| cytochrome o ubiquinol oxidase subunit I [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774739|gb|ABG17258.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Nepal516]
 gi|108780563|gb|ABG14621.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Antiqua]
 gi|115348806|emb|CAL21760.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis CO92]
 gi|145211755|gb|ABP41162.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Pestoides
           F]
 gi|149291402|gb|EDM41476.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis
           CA88-4125]
 gi|152961115|gb|ABS48576.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia
           pseudotuberculosis IP 31758]
 gi|162352506|gb|ABX86454.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis Angola]
 gi|165916111|gb|EDR34718.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921542|gb|EDR38739.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990062|gb|EDR42363.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205908|gb|EDR50388.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960553|gb|EDR56574.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051929|gb|EDR63337.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057390|gb|EDR67136.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751993|gb|ACA69511.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia
           pseudotuberculosis YPIII]
 gi|186697344|gb|ACC87973.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681247|gb|EEO77341.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis Nepal516]
 gi|229687740|gb|EEO79813.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229695136|gb|EEO85183.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700999|gb|EEO89028.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis Pestoides
           A]
 gi|262362961|gb|ACY59682.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis D106004]
 gi|262366880|gb|ACY63437.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis D182038]
 gi|270338010|gb|EFA48787.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis KIM D27]
 gi|294355354|gb|ADE65695.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis Z176003]
 gi|342854121|gb|AEL72674.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis A1122]
 gi|391489131|gb|EIR44910.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-14]
 gi|391519170|gb|EIR71823.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-29]
 gi|391539185|gb|EIR89928.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-45]
 gi|391572832|gb|EIS20006.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-54]
 gi|391667877|gb|EIT03158.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-91]
 gi|391711600|gb|EIT42553.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-100]
 gi|411174219|gb|EKS44252.1| cytochrome O ubiquinol oxidase subunit I [Yersinia pestis INS]
          Length = 663

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/581 (64%), Positives = 464/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+ + G +L+ ISL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFAVGVVLINISLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQINSAMLWTIGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHTMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA+V
Sbjct: 548 PFYNFAVVPNVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L II F+  ++  I  +F+   +YY+ + E+  IE 
Sbjct: 608 WYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPAAEVERIEN 648


>gi|238765440|ref|ZP_04626361.1| Ubiquinol oxidase subunit 1 [Yersinia kristensenii ATCC 33638]
 gi|238696334|gb|EEP89130.1| Ubiquinol oxidase subunit 1 [Yersinia kristensenii ATCC 33638]
          Length = 663

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 464/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTVGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G +LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHPMLMVAAGGAVLIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPEVTDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L I+ F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIVGFVGMIVTWIVKSFDEDVDYYVPVAEVERIED 648


>gi|260596799|ref|YP_003209370.1| cytochrome o ubiquinol oxidase subunit I [Cronobacter turicensis
           z3032]
 gi|260215976|emb|CBA28618.1| Ubiquinol oxidase subunit 1 [Cronobacter turicensis z3032]
          Length = 663

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/585 (64%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLVRGFADAIMMRTQQLLAASGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 428 VVFGCFAGMSYWWPKAFGYKMNESWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPMFQPLMIVAEIGALLIACGILCIILQIYVSVRDRHLNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MPKN+  GI I  FS I GFA++
Sbjct: 548 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPKNSAAGIFIGAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 608 WHIWWLAILGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 652


>gi|421890558|ref|ZP_16321415.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia solanacearum
           K60-1]
 gi|378964060|emb|CCF98163.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia solanacearum
           K60-1]
          Length = 659

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/584 (65%), Positives = 460/584 (78%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAVMMRSQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +LV +SL +G FA TGWL YPPLS +A SP VGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELAYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNTAGGNPMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVYATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F   +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVEFNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI +WFPKAFG+KL+  WGK +FW W +GFY+AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITFWFPKAFGFKLDEKWGKRAFWCWFVGFYMAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  LIA GI S +IQ+ VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVCGAALIACGIASQLIQIFVSIRNRKALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P++   D++  MK    + P      ++ I MPKNT  G ++ +FS++MGF 
Sbjct: 548 AHYNFASVPVVRDIDAFADMKARG-EVPTQVAASYEKIHMPKNTGAGFIMGMFSVVMGFG 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W +  +     ++  I+ + N   +YY+ ++E+   E  
Sbjct: 607 LIWHIWWMAALGLAGMIVSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|187930229|ref|YP_001900716.1| cytochrome o ubiquinol oxidase subunit I [Ralstonia pickettii 12J]
 gi|187727119|gb|ACD28284.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia pickettii 12J]
          Length = 658

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/583 (65%), Positives = 459/583 (78%), Gaps = 3/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAIMMRSQLAVASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +L+ +SL +GEFA TGWL YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLINVSLGVGEFARTGWLAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNG-GGNAMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 307 KKLFGYTSMVWATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL+  WGK +FW W +GFY AFMPLY+LGFMG+TRR++H +
Sbjct: 427 VVFGYLAGITYWFPKAFGFKLDEKWGKRAFWCWFVGFYTAFMPLYVLGFMGMTRRLNHTD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  +IA GI S +IQ+ VS R RH L D+TGDPW GRTLEW+TSSPP
Sbjct: 487 NPAWQPWLIVAVIGAAIIACGIASQLIQIFVSVRNRHALADLTGDPWGGRTLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK--DKFQDILMPKNTNIGILISIFSLIMGFAL 538
             YNFA +P+I   D++  MK       +    ++ I MPKNT  G  I +FS++MGFAL
Sbjct: 547 AHYNFARVPVIRDIDAFADMKARGEVLTQVAPSYEKIHMPKNTGAGFFIGMFSIVMGFAL 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +WH+W + ++  +  +   I  + N   +YY+ + E+   E  
Sbjct: 607 IWHIWWMAVLGLVGMIGSFILRSNNDDIDYYVPAHEVHETESA 649


>gi|333925883|ref|YP_004499462.1| cytochrome o ubiquinol oxidase subunit I [Serratia sp. AS12]
 gi|333930836|ref|YP_004504414.1| cytochrome o ubiquinol oxidase subunit I [Serratia plymuthica AS9]
 gi|386327707|ref|YP_006023877.1| cytochrome o ubiquinol oxidase subunit I [Serratia sp. AS13]
 gi|333472443|gb|AEF44153.1| cytochrome o ubiquinol oxidase, subunit I [Serratia plymuthica AS9]
 gi|333489943|gb|AEF49105.1| cytochrome o ubiquinol oxidase, subunit I [Serratia sp. AS12]
 gi|333960040|gb|AEG26813.1| cytochrome o ubiquinol oxidase, subunit I [Serratia sp. AS13]
          Length = 663

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/583 (64%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIMKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQLNSAMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHPLLLVAASGAALIACGILCQLIQIFVSVRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K  K++ I MPKNT  G++I+ FSL+ GFA++
Sbjct: 548 PFYNFAVVPQIHDRDEFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIAGFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + I +F+  ++  I  +F+   +YY+  +EI  IE + 
Sbjct: 608 WDIWWMAIAAFVGMIVTWIAKSFDEDVDYYVQVDEIERIENQH 650


>gi|374314206|ref|YP_005060635.1| cytochrome o ubiquinol oxidase subunit I [Serratia symbiotica str.
           'Cinara cedri']
 gi|363988432|gb|AEW44623.1| cytochrome o ubiquinol oxidase subunit I [Serratia symbiotica str.
           'Cinara cedri']
          Length = 663

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/585 (64%), Positives = 468/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+     G+L P HY+QIFTAHGVIMIFF+AMPLV G++N ++
Sbjct: 68  MLLRGFADAIMMRSQQAIASAGESGFLSPHHYDQIFTAHGVIMIFFMAMPLVIGLMNIVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL IGEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVLLINLSLGIGEFAQTGWLAYPPLSGKKYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++G+GTL++GIN  +TIIKMRAPGM LM MP+FTWT LCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQVSGLGTLMTGINFFSTIIKMRAPGMSLMKMPVFTWTVLCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL LPVFGIFSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILALPVFGIFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ ITLLS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITLLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRI+F   +LWTIGF+ITF IGGM GV+LAVPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTLYQGRIQFNSVMLWTIGFIITFSIGGMTGVLLAVPAANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK FG++L   WG  +FW W+IGF++AFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKIFGFRLNEIWGIRAFWCWIIGFFIAFMPLYALGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +      +AA G  LIA GIL  +IQ+ VS R R    D TGDPWN RTLEWSTSSPP
Sbjct: 488 NPAFHSLLVVAACGATLIACGILFQLIQIFVSVRDREYNRDFTGDPWNARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA +P IH  D +WY+K+ +  + K  +++ I MPKNT+ G++I+ FSL+  FA++
Sbjct: 548 PLYNFAVVPQIHDRDEFWYLKEKDEAYNKPIRYEPIHMPKNTSAGVIIAGFSLLFSFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++W + I+ FI  ++  I  +F+   +YYI  +EI  IE K  +
Sbjct: 608 WNIWWMAIVGFIGIIVAWIAKSFDENIDYYIPVDEIQYIENKHYK 652


>gi|283834250|ref|ZP_06353991.1| cytochrome o ubiquinol oxidase, subunit I [Citrobacter youngae ATCC
           29220]
 gi|291069772|gb|EFE07881.1| cytochrome o ubiquinol oxidase, subunit I [Citrobacter youngae ATCC
           29220]
          Length = 663

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLIRGFADAVMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++Q++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWAVQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEVAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL   IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIALGILCQFIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVITAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+  +E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVQEVEKLENQH 650


>gi|365848308|ref|ZP_09388785.1| cytochrome o ubiquinol oxidase, subunit I [Yokenella regensburgei
           ATCC 43003]
 gi|364571016|gb|EHM48615.1| cytochrome o ubiquinol oxidase, subunit I [Yokenella regensburgei
           ATCC 43003]
          Length = 663

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL  PPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLASPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 DPQFHSMLIIAACGAALIALGILCQLIQIFVSIRDREQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + K   +++I MP+N+  GI+I+ F+ I GFA++
Sbjct: 548 PFYNFAHVPHVHERDAFWEMKEKGEAYKKPAGYEEIHMPRNSGAGIVIAAFATIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SF   +I  I  +F+   +YY+   EI  +E + 
Sbjct: 608 WHIWWMAIASFAGIIITWIVKSFDEDVDYYVPVAEIEKLENQH 650


>gi|423112875|ref|ZP_17100566.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5245]
 gi|376390369|gb|EHT03055.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5245]
          Length = 663

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++H+ D++W MK+    + K   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPVVHERDAFWEMKEKGEAYKKPAGYEEIHMPKNSGAGIVIAAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF+  L   I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWLAIASFVGILATWIIKSFDEDVDYYVPVAVVEKLENQH 650


>gi|386824455|ref|ZP_10111590.1| cytochrome O ubiquinol oxidase subunit I [Serratia plymuthica
           PRI-2C]
 gi|386378666|gb|EIJ19468.1| cytochrome O ubiquinol oxidase subunit I [Serratia plymuthica
           PRI-2C]
          Length = 663

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIMKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQLNSAMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHPLLLVAASGAALIACGILCQLIQIFVSVRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K  K++ I MPKNT  G++I+ FSL+ GFA++
Sbjct: 548 PFYNFAVVPQIHDRDEFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIAGFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + I +F+  ++  I  +F+   +YY+  +EI  IE + 
Sbjct: 608 WDIWWMAIAAFVGMIVTWIAKSFDEDVDYYVQVDEIERIENQH 650


>gi|418019319|ref|ZP_12658827.1| cytochrome o ubiquinol oxidase [Candidatus Regiella insecticola
           R5.15]
 gi|347605336|gb|EGY29794.1| cytochrome o ubiquinol oxidase [Candidatus Regiella insecticola
           R5.15]
          Length = 678

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/598 (62%), Positives = 465/598 (77%), Gaps = 16/598 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA+S     G+LPP HY+Q+FTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALSSAGEAGFLPPHHYDQVFTAHGVIMIFFMAMPFIVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ ISL +GEFA TGWL YPPLS    +PGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFVVGVLLINISLGVGEFAQTGWLAYPPLSAKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI++MRAPGM +M MP+FTWTALC+NILI+ AFP+LT
Sbjct: 188 DYWIWSLQISGLGTLLAGVNFFATILRMRAPGMSMMQMPVFTWTALCSNILIIVAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP FGIFSEV +TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPAFGIFSEVTATFCR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITILSFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTIGFIVTFTVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L+  WG  +FWFWL+GF+VAFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLDEKWGIRAFWFWLVGFFVAFMPLYILGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A  G LLI  GIL  +IQ+ VS R R    D+TGDPWN RTLEW+TSSPP
Sbjct: 488 NPEFHPMLMVATGGALLITCGILCQLIQIFVSIRDREKNRDLTGDPWNARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP----------------KDKFQDILMPKNTNIG 524
           P YNFA +P IH  D +W MK+N   +P                  K++ I MPKNT  G
Sbjct: 548 PFYNFALVPKIHDRDEFWRMKENAEAYPFLASPDTAKSDVIKPNSVKYEPIHMPKNTGAG 607

Query: 525 ILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           ++I+ FSLI GFA++W++W L I+  I  ++  I  +F+   +YY+  +E+  IE + 
Sbjct: 608 VIIAGFSLIFGFAMIWYIWWLAIVGLIGAMVTWIIKSFDEDVDYYVPVDEVARIESQH 665


>gi|290510104|ref|ZP_06549474.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella sp. 1_1_55]
 gi|289776820|gb|EFD84818.1| cytochrome o ubiquinol oxidase, subunit I [Klebsiella sp. 1_1_55]
          Length = 663

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SFI  +   I  +F+   +YY+   ++  +EK+ 
Sbjct: 608 WHIWWMAIASFIGIVATWIIKSFDEDVDYYVPVAKVEKLEKQH 650


>gi|429335335|ref|ZP_19215968.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida CSV86]
 gi|428759975|gb|EKX82256.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida CSV86]
          Length = 657

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/586 (63%), Positives = 463/586 (79%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++   S GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADALMMRTQQAMASDGSPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN +SFW+   GA+LV ISL IGEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNAVSFWLFVAGALLVNISLGIGEFARTGWVAYPPLSGIGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GTLL+G+N   TI+KMR  GM L  MP+FTWT LCT+ILI+AAFP+LT
Sbjct: 188 DYYIWSLQISGVGTLLTGLNFFVTILKMRTTGMTLFRMPVFTWTVLCTSILILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LF+ +LDRY+G HFFTN+LGGN MMYVNLIW WGHPEVYIL+LP FGIFSEV STF+ 
Sbjct: 248 ATLFMLSLDRYLGMHFFTNELGGNPMMYVNLIWAWGHPEVYILILPAFGIFSEVASTFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+VITLLS+IVW+HHFFTMG+G NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYYSLVWATIVITLLSFIVWVHHFFTMGAGPNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVRFETPMLWTVGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG + G+ YWFPKAFG+KL    G+ +FW WL GFY AFMP Y LGFMG+TRR++HF+
Sbjct: 428 AVFGYLCGLTYWFPKAFGFKLYDPLGRAAFWCWLAGFYFAFMPSYFLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               +    +  FG  +I  G+   + QL+VS RKRH   D TGDPW+GRTLEW+T+SPP
Sbjct: 488 VPQWRPLLLLEMFGVCIILCGVACQVAQLVVSIRKRHENRDYTGDPWDGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P++H  D++W MK+   +   K  F+ I MP NT++G++I   S ++GFALV
Sbjct: 548 PFYNFAEQPVVHGIDAYWGMKERGVETLAKADFRKIHMPCNTSLGLVIGALSTVLGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L I S + T+  +I  +++    YY+ + E+  +E +R +L
Sbjct: 608 WHIWWLVIASLLATVATLIVRSYDQNTEYYVEAREVERLETERRQL 653


>gi|423106990|ref|ZP_17094685.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5243]
 gi|376389116|gb|EHT01808.1| ubiquinol oxidase subunit 1 [Klebsiella oxytoca 10-5243]
          Length = 663

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++H+ D++W MK+    + K   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPVVHERDAFWEMKEKGEAYKKPAGYEEIHMPKNSGAGIVIAAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF+  L   I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWLAIASFVGILATWIIKSFDEDVDYYVPVAVVEKLENQH 650


>gi|354598756|ref|ZP_09016773.1| cytochrome o ubiquinol oxidase, subunit I [Brenneria sp. EniD312]
 gi|353676691|gb|EHD22724.1| cytochrome o ubiquinol oxidase, subunit I [Brenneria sp. EniD312]
          Length = 663

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMLRGFADAIMMRGQQVLASAGEAGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ ISL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVILINISLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGLGTTLTGVNFFATIMKMRAPGMSLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGI+SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITILSFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LW+IGF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQSHSTMLWSIGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+    
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLGQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G LLI +G+L  ++Q  VS R RH   D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 NPEFHSLLVVASVGALLIGIGVLCQVMQFYVSIRDRHQNRDLTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +PL+   D++W  K+    + K   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFATVPLVDDRDAFWDAKEKGEAYRKPAGYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L II F   ++  I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWLAIIGFAGMVVTWIVHSFNQDVDYYVPVKEIEKIENQN 650


>gi|123443350|ref|YP_001007324.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332160742|ref|YP_004297319.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|386309505|ref|YP_006005561.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|418242384|ref|ZP_12868896.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. palearctica PhRBD_Ye1]
 gi|420257498|ref|ZP_14760255.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. enterocolitica WA-314]
 gi|122090311|emb|CAL13177.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318604621|emb|CBY26119.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325664972|gb|ADZ41616.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330859961|emb|CBX70290.1| Ubiquinol oxidase subunit 1 [Yersinia enterocolitica W22703]
 gi|351778218|gb|EHB20385.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. palearctica PhRBD_Ye1]
 gi|404515012|gb|EKA28790.1| cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           subsp. enterocolitica WA-314]
          Length = 663

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTVGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHPMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPEVTDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L I+ F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIVGFVGMIVTWIVKSFDEDVDYYVPVAEVERIED 648


>gi|395232647|ref|ZP_10410897.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter sp. Ag1]
 gi|394733049|gb|EJF32688.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter sp. Ag1]
          Length = 663

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/585 (63%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G +LV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVVLVNLSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+ MR PGM +  MP+FTW +LCTN+LI+AAFP+ T
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILNMRTPGMTMFKMPVFTWASLCTNVLIIAAFPIFT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRI F   +LWTIGF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTVYQGRIVFNSAMLWTIGFIVTFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTLLVVAACGAALIALGILCQLIQFYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MP+N+  GI+I+ FS + GFA++
Sbjct: 548 PFYNFAHLPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPRNSAAGIIIAAFSTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E +   
Sbjct: 608 WHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVAEVEKLENQHFE 652


>gi|238791424|ref|ZP_04635062.1| Ubiquinol oxidase subunit 1 [Yersinia intermedia ATCC 29909]
 gi|238729040|gb|EEQ20556.1| Ubiquinol oxidase subunit 1 [Yersinia intermedia ATCC 29909]
          Length = 663

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAGTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSAMLWTIGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHAMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPNVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L II F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPVAEVERIEN 648


>gi|311280672|ref|YP_003942903.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           SCF1]
 gi|308749867|gb|ADO49619.1| cytochrome o ubiquinol oxidase, subunit I [Enterobacter cloacae
           SCF1]
          Length = 663

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTN++GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYVGTHFFTNEMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGILCQLIQYYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W +K+    + + K +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAHVPHVHERDAFWELKEKGEAYKQPKHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGIVISWIVKSFDEDVDYYVPVAEVEKLENQH 650


>gi|329296776|ref|ZP_08254112.1| cytochrome o ubiquinol oxidase subunit I [Plautia stali symbiont]
          Length = 660

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/583 (65%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAIGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTW ALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMDLFKMPVFTWAALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTLALLTLDRYLDFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFNSAMLWTIGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHSLLVVAAGGAALIACGILCQLIQFWVSVRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP IH+ D++W MK+    + + +K+++I MPKN+   I+I+ F  + GFAL+
Sbjct: 548 PFYNFAVIPHIHERDAFWEMKEKGEAYKQPEKYEEIHMPKNSGAAIVIAAFLTVFGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  ++F+ T++  I  +F+   +YY+   EI  +EKK 
Sbjct: 608 WHIWWLAGLTFLGTIVTWIVKSFDEDVDYYVPVAEIEQLEKKH 650


>gi|429092468|ref|ZP_19155096.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter dublinensis
           1210]
 gi|426742667|emb|CCJ81209.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter dublinensis
           1210]
          Length = 646

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/585 (64%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 51  MLVRGFADAIMMRTQQLLAASGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 171 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 231 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 411 VVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  ++Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 471 DPMFQPLMIVAEIGALLIACGILCIVLQIYVSVRDRHLNRDLTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MP+N+  GI I  FS I GFA++
Sbjct: 531 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPRNSAAGIFIGAFSTIFGFAMI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 591 WHIWWLAILGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 635


>gi|420370104|ref|ZP_14870720.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           1235-66]
 gi|391320533|gb|EIQ77365.1| cytochrome o ubiquinol oxidase, subunit I [Shigella flexneri
           1235-66]
          Length = 663

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++Q++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWAVQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS++VWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFVVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFWLIGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWLIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIALGILCQLIQIYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVITAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|322834052|ref|YP_004214079.1| cytochrome o ubiquinol oxidase subunit I [Rahnella sp. Y9602]
 gi|383191248|ref|YP_005201376.1| cytochrome o ubiquinol oxidase subunit I [Rahnella aquatilis CIP
           78.65 = ATCC 33071]
 gi|384259230|ref|YP_005403164.1| cytochrome O ubiquinol oxidase subunit I [Rahnella aquatilis HX2]
 gi|321169253|gb|ADW74952.1| cytochrome o ubiquinol oxidase, subunit I [Rahnella sp. Y9602]
 gi|371589506|gb|AEX53236.1| cytochrome o ubiquinol oxidase, subunit I [Rahnella aquatilis CIP
           78.65 = ATCC 33071]
 gi|380755206|gb|AFE59597.1| cytochrome O ubiquinol oxidase subunit I [Rahnella aquatilis HX2]
          Length = 663

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 457/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQVLASAGEPGFLPPHHYDQIFTAHGVIMIFFMAMPFVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN+SFW T+   +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNVSFWFTAAAVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGVGTLLTGVNFFATILKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIMTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI     +LWT+GF+ITF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRITLNAAMLWTVGFIITFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  SFWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNEKWGVRSFWFWIIGFFVAFMPLYVLGFMGMTRRVSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +I + VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 DPEFHPLLVVAACGAALIACGILCQLIMIFVSVRDRDQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + +  K++ I MP+N+  G +I++ SL+ GFAL+
Sbjct: 548 PFYNFAIVPQIHDRDEFWDMKEKGTAYKQPAKYEPIHMPRNSGAGFIIAMLSLVCGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W L  +SFI      I  +F+   +YY+  EE+  IE + 
Sbjct: 608 WDIWWLAAVSFIALAATWIAKSFDEDVDYYVPVEEVERIENQH 650


>gi|429083897|ref|ZP_19146923.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter condimenti
           1330]
 gi|426547251|emb|CCJ72964.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter condimenti
           1330]
          Length = 663

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/585 (64%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLVRGFADAIMMRTQQLLAASGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWFTIVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 428 VVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  ++Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPMFQPLMIVAEIGALLIACGILCIVLQIYVSVRDRHLNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MP+N+  GI I  FS I GFA++
Sbjct: 548 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPRNSAAGIFIGAFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 608 WHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 652


>gi|238759269|ref|ZP_04620436.1| Ubiquinol oxidase subunit 1 [Yersinia aldovae ATCC 35236]
 gi|238702556|gb|EEP95106.1| Ubiquinol oxidase subunit 1 [Yersinia aldovae ATCC 35236]
          Length = 663

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQLNSAMLWTIGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G +LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHSMLMVAAGGAVLIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPEVTDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L I+ F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIVGFVGMIVTWIVKSFDEDVDYYVPVAEVERIED 648


>gi|237730408|ref|ZP_04560889.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter sp. 30_2]
 gi|365104943|ref|ZP_09334335.1| ubiquinol oxidase subunit 1 [Citrobacter freundii 4_7_47CFAA]
 gi|226905947|gb|EEH91865.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter sp. 30_2]
 gi|363643884|gb|EHL83188.1| ubiquinol oxidase subunit 1 [Citrobacter freundii 4_7_47CFAA]
          Length = 663

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++Q++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWAVQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS++VWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFVVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIALGILCQLIQIFVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVITAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|336249028|ref|YP_004592738.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter aerogenes
           KCTC 2190]
 gi|334735084|gb|AEG97459.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter aerogenes
           KCTC 2190]
          Length = 663

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHSMLVVAACGAALIACGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPNVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIIIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   ++  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVVTWIIKSFDEDVDYYVPVAEVEKLENQH 650


>gi|153007394|ref|YP_001368609.1| cytochrome o ubiquinol oxidase subunit I [Ochrobactrum anthropi
           ATCC 49188]
 gi|151559282|gb|ABS12780.1| Cytochrome o ubiquinol oxidase subunit I [Ochrobactrum anthropi
           ATCC 49188]
          Length = 659

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/585 (65%), Positives = 470/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQAI+ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF V
Sbjct: 68  MLFRGFSDAVMMRAQQAIASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAIL+ ISL +GEFA TGWL YPPLSG   SP VGV
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILINISLGVGEFAKTGWLAYPPLSGKEFSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLLSG+N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYIWALQISGMGTLLSGVNLITTIIKMRAPGMGMMQVPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLSLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIFSEIVATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYATV IT+LS++VW+HHFFTMG GANVNAFFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYKSMVYATVAITVLSFLVWVHHFFTMGGGANVNAFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGLVYWWPKAFGFKLNERLGKNAFWCWLVGFILAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  ++Q+ VS R R  L D  GD W  GRTLEWS +SP
Sbjct: 488 NPAWHIYLIIAAIGVAIILCGIVFQVLQIAVSIRDREKLRDNNGDSWGTGRTLEWSLASP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P  YNFA +P +   D WW MK+N +    +KF  I MPKNT  G +I I ++ +GFALV
Sbjct: 548 PAFYNFAEVPHVRDHDGWWDMKQNGYVRRTEKFARIHMPKNTGTGFIIGILNIPLGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +  L + I ++FN  R++Y+S+EE+  +E  R R
Sbjct: 608 WHIWWLAIASAVAVLAVAIAHSFNNDRDFYVSAEEVQEVEDLRTR 652


>gi|422016467|ref|ZP_16363050.1| ubiquinol oxidase polypeptide [Providencia burhodogranariea DSM
           19968]
 gi|414092666|gb|EKT54339.1| ubiquinol oxidase polypeptide [Providencia burhodogranariea DSM
           19968]
          Length = 663

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/585 (64%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ +SL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINLSLGVGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATII+MRAPGM +M MP+FTW A CTNILI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATIIRMRAPGMSMMKMPVFTWAAFCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITIMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKAYGFTLNEKWGVRAFWFWIIGFFVAFMPLYVLGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      +AA G  LIA+GI   ++Q+IVS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPTYHTMLVVAACGAALIAIGIACQVVQVIVSIRDRHENRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D+WW MK+      +  ++++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVEPHIQTRDAWWDMKEKGTAHKQPTEYEEIHMPKNTGAGVIIAAFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 608 WHIWWLAIVGFGGMIVTWIAKSFDEDVDYYVPVAEIEEIENKHFE 652


>gi|262042467|ref|ZP_06015626.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040171|gb|EEW41283.1| ubiquinol oxidase subunit 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 663

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  S GVGV
Sbjct: 128 PLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSSGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFNSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVIAACGAALIACGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I SFI  +   I  +F+   +YY+   E+  +EK+ 
Sbjct: 608 WHIWWMAIASFIGIVATWIIKSFDEDVDYYVPVAEVEKLEKQH 650


>gi|238788000|ref|ZP_04631796.1| Ubiquinol oxidase subunit 1 [Yersinia frederiksenii ATCC 33641]
 gi|238723948|gb|EEQ15592.1| Ubiquinol oxidase subunit 1 [Yersinia frederiksenii ATCC 33641]
          Length = 663

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFNSAMLWTVGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHPMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPEVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L I+ F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIVGFVGMIVTWIVKSFDEDVDYYVPVAEVERIED 648


>gi|395228102|ref|ZP_10406426.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter sp. A1]
 gi|421843729|ref|ZP_16276889.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter freundii ATCC
           8090 = MTCC 1658]
 gi|424730599|ref|ZP_18159194.1| cytochrome o ubiquinol oxidase subunit i [Citrobacter sp. L17]
 gi|394718224|gb|EJF23861.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter sp. A1]
 gi|411775450|gb|EKS58896.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter freundii ATCC
           8090 = MTCC 1658]
 gi|422894792|gb|EKU34599.1| cytochrome o ubiquinol oxidase subunit i [Citrobacter sp. L17]
          Length = 663

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++Q++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWAVQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS++VWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFVVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIALGILCQLIQIYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVITAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|271499591|ref|YP_003332616.1| cytochrome o ubiquinol oxidase subunit I [Dickeya dadantii Ech586]
 gi|270343146|gb|ACZ75911.1| cytochrome o ubiquinol oxidase, subunit I [Dickeya dadantii Ech586]
          Length = 663

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAVMMR QQ ++     G+L P HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMLRGFADAVMMRGQQVLASAGEAGFLTPHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL IGEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVILINLSLGIGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTNILI+AAFP+LT
Sbjct: 188 DYWIWSLQISGVGTTLTGVNFFATIMKMRAPGMSLMKMPVFTWTALCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGI+SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHSAMLWTTGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FW W+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWCWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G  LIA+G+L  IIQ  VS R R    D+TGDPW+ RTLEW+TSSPP
Sbjct: 488 NPEFHPLLVVASVGAGLIALGVLCQIIQFAVSIRDRDQNRDLTGDPWDARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I + D++W MK+    + K  ++++I MP+NT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHIQERDAFWEMKEKGEAYRKPAQYEEIHMPRNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W++W L II F+  ++  I ++FN   +YY+   E+  IE + 
Sbjct: 608 WYIWWLAIIGFVGMIVTWIAHSFNQDVDYYVPVNEVEHIENQN 650


>gi|421492892|ref|ZP_15940251.1| hypothetical protein MU9_1421 [Morganella morganii subsp. morganii
           KT]
 gi|455740400|ref|YP_007506666.1| Cytochrome O ubiquinol oxidase subunit I [Morganella morganii
           subsp. morganii KT]
 gi|400192997|gb|EJO26134.1| hypothetical protein MU9_1421 [Morganella morganii subsp. morganii
           KT]
 gi|455421963|gb|AGG32293.1| Cytochrome O ubiquinol oxidase subunit I [Morganella morganii
           subsp. morganii KT]
          Length = 663

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA+S     G+LPPEHY+QIFTAHGVIMIFFVA P V G++N +V
Sbjct: 68  MLIRGFADAIMMRAQQALSSAGEAGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +LV ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVMLVNISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N  AT+++MRAPGM +M MP+FTW A CTNILI+AAFP+LT
Sbjct: 188 DYWLWSLQISGIGTLLTGVNFFATVLRMRAPGMSMMKMPVFTWAAFCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTLTGLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWT+GF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKTPMLWTVGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKAFG+ L   WG  +FW W IGF+VAFMP+Y+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGTAYWFPKAFGFTLNEKWGVRAFWCWFIGFFVAFMPVYVLGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      IAA G  +I +GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPTFHTMLLIAAVGVAIIGVGILCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D WW MK+      +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAEVPDVQSRDEWWEMKEKGTAHKRPAKYEEIHMPKNTAAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   E+  IE   
Sbjct: 608 WHIWWLAIVGFAGMIVTWIAKSFDEDVDYYVPVAEVEKIENAH 650


>gi|384415848|ref|YP_005625210.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis biovar
           Medievalis str. Harbin 35]
 gi|320016352|gb|ADV99923.1| cytochrome o ubiquinol oxidase subunit I [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 663

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ + G +L+ ISL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPLLNSLSFWLFAVGVVLINISLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQINSAMLWTIGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHTMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA+V
Sbjct: 548 PFYNFAVVPNVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L II F+  ++  I  +F+   +YY+ + E+  IE 
Sbjct: 608 WYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPATEVERIEN 648


>gi|404316901|ref|ZP_10964834.1| cytochrome o ubiquinol oxidase subunit I [Ochrobactrum anthropi
           CTS-325]
          Length = 659

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/585 (65%), Positives = 470/585 (80%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQAI+ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF V
Sbjct: 68  MLFRGFSDAVMMRAQQAIASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAIL+ ISL +GEFA TGWL YPPLSG   SP VGV
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILINISLGVGEFAKTGWLAYPPLSGKEFSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLLSG+N+I TIIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+LT
Sbjct: 188 DYYIWALQISGMGTLLSGVNLITTIIKMRAPGMGMMQVPVFTWTALCSNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLSLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIFSEIVATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYATV IT+LS++VW+HHFFTMG GANVNAFFG+ TMIISIPTGAK+FNWL
Sbjct: 308 KRLFGYKSMVYATVAITVLSFLVWVHHFFTMGGGANVNAFFGVATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P++WTIGFM TFV+GGM GV+LAVP A+F+LHNS+FL+AHFHNVII G
Sbjct: 368 FTMYKGRVRMETPVMWTIGFMCTFVVGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIISG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H E
Sbjct: 428 VLFGCFAGLVYWWPKAFGFKLNERLGKNAFWCWLVGFILAFMPLYVLGLMGMTRRLNHTE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSSP 479
           + +  I+  IAA G  +I  GI+  ++Q+ VS R R  L D  GD W  GRTLEWS +SP
Sbjct: 488 NPAWHIYLIIAAIGVAIILCGIVFQVLQIAVSIRDREKLRDNNGDSWGTGRTLEWSLASP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P  YNFA +P +   D WW MK+N +    +KF  I MPKNT  G +I I ++ +GFALV
Sbjct: 548 PAFYNFAEVPHVRDHDGWWDMKQNGYVRRTEKFARIHMPKNTGTGFIIGILNIPLGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S +  L + I ++FN  R++Y+S+EE+  +E  R R
Sbjct: 608 WHIWWLAIASAVAVLAVAIAHSFNNDRDFYVSAEEVQEVEDLRTR 652


>gi|37527736|ref|NP_931081.1| ubiquinol oxidase polypeptide I (cytochrome O subunit 1) (oxidase
           BO(3) subunit 1) (cytochrome O ubiquinol oxidase subunit
           1) (ubiquinol oxidase chain A) [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36787172|emb|CAE16248.1| ubiquinol oxidase polypeptide I (cytochrome O subunit 1) (oxidase
           BO(3) subunit 1) (cytochrome O ubiquinol oxidase subunit
           1) (ubiquinol oxidase chain A) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 663

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MMLRGFADAIMMRGQQAVASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G  L+ ISL IGEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVALINISLGIGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI++MRAPGM +M MP+F+W ALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATILRMRAPGMSMMKMPVFSWAALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTFDRYMGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI ++ P+LWT+GF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEYKTPMLWTVGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKAFG+ L   WG  +FWFW+ GF++AFMP+Y LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGTAYWFPKAFGFTLNEKWGIRAFWFWITGFFIAFMPVYALGFMGMTRRISQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        ++A G  LIA+GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPEFHNLLVVSAIGVALIAVGILCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D+WW MK+    + +  K+++I MPKN   G++I+ F+L+ GFA++
Sbjct: 548 PFYNFADVPHVQTRDAWWDMKEKGTAYKRPAKYEEIHMPKNAGAGVIIAGFTLLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWLAIASFAGMIITWIAKSFDEDVDYYVPVAEVEQIENQH 650


>gi|420612921|ref|ZP_15104145.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-13]
 gi|420633812|ref|ZP_15122813.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-19]
 gi|420742067|ref|ZP_15219049.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-63]
 gi|420790840|ref|ZP_15261673.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-90]
 gi|420817628|ref|ZP_15285807.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-95]
 gi|420828041|ref|ZP_15295160.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-98]
 gi|420860305|ref|ZP_15323861.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-113]
 gi|391487285|gb|EIR43235.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-13]
 gi|391503392|gb|EIR57592.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-19]
 gi|391612104|gb|EIS54215.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-63]
 gi|391660291|gb|EIS96466.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-90]
 gi|391691348|gb|EIT24284.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-95]
 gi|391696028|gb|EIT28556.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-98]
 gi|391727626|gb|EIT56817.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-113]
          Length = 663

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+ + G +L+ ISL +GEFA TGWL  PPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFAVGVVLINISLGVGEFAQTGWLASPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQINSAMLWTIGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHTMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA+V
Sbjct: 548 PFYNFAVVPNVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L II F+  ++  I  +F+   +YY+ + E+  IE 
Sbjct: 608 WYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPAAEVERIEN 648


>gi|410087023|ref|ZP_11283728.1| Cytochrome O ubiquinol oxidase subunit I [Morganella morganii SC01]
 gi|409766252|gb|EKN50346.1| Cytochrome O ubiquinol oxidase subunit I [Morganella morganii SC01]
          Length = 663

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA+S     G+LPPEHY+QIFTAHGVIMIFFVA P V G++N +V
Sbjct: 68  MLIRGFADAIMMRAQQALSSAGEAGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +LV ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVMLVNISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N  AT+++MRAPGM +M MP+FTW A CTNILI+AAFP+LT
Sbjct: 188 DYWLWSLQISGIGTLLTGVNFFATVLRMRAPGMSMMKMPVFTWAAFCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTLTGLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWT+GF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKTPMLWTVGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKAFG+ L   WG  +FW W IGF+VAFMP+Y+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGTAYWFPKAFGFTLNEKWGVRAFWCWFIGFFVAFMPVYVLGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      IAA G  +I +GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPTFHTMLLIAAVGVAIIGVGILCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D WW MK+      +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAEVPDVQSRDEWWDMKEKGTAHKRPAKYEEIHMPKNTAAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   E+  IE   
Sbjct: 608 WHIWWLAIVGFAGMIVTWIAKSFDEDVDYYVPVAEVEKIENAH 650


>gi|448240802|ref|YP_007404855.1| cytochrome o ubiquinol oxidase subunit I [Serratia marcescens WW4]
 gi|445211166|gb|AGE16836.1| cytochrome o ubiquinol oxidase subunit I [Serratia marcescens WW4]
 gi|453062442|gb|EMF03433.1| cytochrome O ubiquinol oxidase subunit I [Serratia marcescens
           VGH107]
          Length = 663

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMPMMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIKLNSAMLWTVGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  +FWFW+IGF+ AFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNEKWGIRAFWFWIIGFFTAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  + Q+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHPLLLVAAGGAALIACGILCQLTQIFVSIRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K  K++ I MPKNT  G++I+ FSL+ GFA++
Sbjct: 548 PFYNFAVVPQIHDRDEFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIAFFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W + +  FI  +++ I  +F++  +YY+  +EI  IE + 
Sbjct: 608 WEIWWMALAGFIGMIVVWIGKSFDHDVDYYVQVDEIERIENQH 650


>gi|186470619|ref|YP_001861937.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia phymatum
           STM815]
 gi|184196928|gb|ACC74891.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia phymatum
           STM815]
          Length = 666

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/586 (61%), Positives = 460/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+FG + GYLPP HY+QIFTAHGVIMIFFVA PL+ G++N +V
Sbjct: 68  MLLRGFADAIMMRAQQAIAFGDAAGYLPPHHYDQIFTAHGVIMIFFVATPLILGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVA+PF+N+L FW+++ GA+LVMIS+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQLGARDVAYPFVNSLGFWLSAVGAVLVMISMFVGDFAATGWVAYPPLSELGYSPTTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GT LSGIN + TI++MRAPG+ LM MP+F WTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQVSGLGTTLSGINFVVTILRMRAPGLNLMKMPVFCWTALITNILIVAVFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T+DRY+  HFFTN+LGGN MMY+NLIW+WGHPEVYIL+LP FG FSE+++TFS 
Sbjct: 248 GTLALLTMDRYLDMHFFTNELGGNAMMYINLIWVWGHPEVYILILPAFGAFSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IIS+PTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGILSFFVWLHHFFTMGSGANVNAFFGIMTSIISVPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRYHTSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI+YWFPK FG+ L+ FWGK +FW WL+G+++AF PLYILGF G+TRRM+H++
Sbjct: 428 VVFGCLAGISYWFPKVFGFTLDEFWGKVAFWCWLVGYWLAFTPLYILGFEGMTRRMNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                +W  +A  G  +I MGIL+ ++Q  VS R R    D+TGDPW+ R+LEWST+SP 
Sbjct: 488 VPEWHVWLIVALVGAAIIGMGILALLVQFAVSIRNREHNRDVTGDPWDARSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P+I   +  W  K++   + +   ++DI MP+NT  G +I+ FSL+ GFA+V
Sbjct: 548 PFYNFAHVPVITSLEQHWDDKQSGRAYRRPATYEDIHMPRNTAAGFVIAAFSLLFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WHMWL  +   I  +   I  +++   +YY+S+ E+  IE  R  L
Sbjct: 608 WHMWLFAVAGLIGMIATFIARSYDQDVDYYVSAAEVERIENARFEL 653


>gi|372280335|ref|ZP_09516371.1| cytochrome o ubiquinol oxidase subunit I [Oceanicola sp. S124]
          Length = 664

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/581 (64%), Positives = 464/581 (79%), Gaps = 2/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMRLQQA++ G + GYLPP HY+Q+FTAHGVIMIFFVAMP VTGI+N+++
Sbjct: 82  MMVRGFADALMMRLQQALAAGGAEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGIMNYVM 141

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLNN SFWMT  GA+LV ISLF+GEFA  GWL +PPLSG + S G G+
Sbjct: 142 PTQIGARDVAFPFLNNFSFWMTVAGALLVNISLFVGEFARVGWLAFPPLSGASYSTGPGM 201

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQIAG+GT LSGIN+IATI+KMRAPGMK+M MP+FTWTAL TN+LIVAAFPVLT
Sbjct: 202 DYYLWALQIAGVGTTLSGINLIATILKMRAPGMKMMMMPVFTWTALITNVLIVAAFPVLT 261

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+   FFTND GGN MMY+NLIWIWGHPEVYIL++P+FG+FSE+V+TFS 
Sbjct: 262 ATLGMLTLDRYLDFRFFTNDFGGNAMMYINLIWIWGHPEVYILIIPIFGVFSEIVATFSR 321

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+AT  I +LS++VWLHHFFTMGSGANVN FFGITTMII++PTG KIFNWL
Sbjct: 322 KPLFGYTTMVWATACIMVLSFVVWLHHFFTMGSGANVNTFFGITTMIIAVPTGVKIFNWL 381

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG +R EVP+ WTIGF++TF IGGM GV+LAVP  +F LHN+LFL+AHFHNVIIGG
Sbjct: 382 FTMYRGSVRLEVPMYWTIGFLVTFTIGGMTGVLLAVPPVDFQLHNTLFLIAHFHNVIIGG 441

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ + + YW+PKAFG+KL+  WGK +FW W +GFY+AFMPLY LG MGVTRRM+ +E
Sbjct: 442 VVFGVYAAVTYWWPKAFGFKLDDRWGKRAFWGWFVGFYLAFMPLYALGLMGVTRRMNSYE 501

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D+  Q +F IAA G ++I  GILS  +   VS R R  L    GDPW+ RTLEW+  SPP
Sbjct: 502 DMGWQPYFIIAAVGAVVILFGILSTFMCFYVSIRDRKRL-ACGGDPWDARTLEWANQSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNF    ++   D +W MK+  FK+  D +Q I MPK+T  G+LIS F+L  GFA+VW
Sbjct: 561 QKYNFPQDIVVTGRDMFWKMKEEGFKWSTD-YQAIHMPKDTATGVLISAFALAFGFAMVW 619

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           ++W L I+SF+  L I I +TFNY R+YYI  +E+   E K
Sbjct: 620 YIWWLAILSFVAMLAIGIAHTFNYNRDYYIQPDEVAATEAK 660


>gi|300702888|ref|YP_003744489.1| cytochrome o ubiquinol oxidase, subunit i [Ralstonia solanacearum
           CFBP2957]
 gi|299070550|emb|CBJ41845.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia solanacearum
           CFBP2957]
          Length = 659

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 458/583 (78%), Gaps = 2/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAVMMRSQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +LV +SL +G FA TGWL YPPLS +A SP VGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELAYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNTAGGNPMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVYATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI +WFPKAFG+KL+  WGK +FW W +GFY+AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITFWFPKAFGFKLDEKWGKRAFWCWFVGFYMAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  LIA GI S +IQ+ VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVCGAALIACGIASQLIQIFVSIRNRKALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK--DKFQDILMPKNTNIGILISIFSLIMGFAL 538
             YNFA +P++   D++  MK       +    ++ I MPKNT  G ++ +FS++MGF L
Sbjct: 548 AHYNFASVPVVRDIDAFADMKARGEVSTQVAASYEKIHMPKNTGAGFIMGMFSVVMGFGL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +WH+W +  +     ++  I+ + N   +YY+ ++E+   E  
Sbjct: 608 IWHIWWMAALGLAGMIVSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|452124612|ref|ZP_21937196.1| ubiquinol oxidase subunit I [Bordetella holmesii F627]
 gi|452128003|ref|ZP_21940582.1| ubiquinol oxidase subunit I [Bordetella holmesii H558]
 gi|451923842|gb|EMD73983.1| ubiquinol oxidase subunit I [Bordetella holmesii F627]
 gi|451926218|gb|EMD76354.1| ubiquinol oxidase subunit I [Bordetella holmesii H558]
          Length = 658

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/584 (64%), Positives = 467/584 (79%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAIMMRTQLAVASGDSTGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+ S G +L+M+SLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFSAGVVLIMMSLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN + TI++MRAPGM LM MP+FTWTAL TNILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTTLSGINFVVTILRMRAPGMNLMKMPVFTWTALVTNILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+GTHFFTND GGN+MMYVNLIWIWGHPEVYIL+LP FG FSE+++T+S 
Sbjct: 248 ATLALLTADRYLGTHFFTNDGGGNVMMYVNLIWIWGHPEVYILILPCFGAFSEIIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAK+FNWL
Sbjct: 308 KPLFGYNSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR++   P+LWTIGFM+TFVIGGM GV++A+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRVQMTTPVLWTIGFMVTFVIGGMTGVLMAIPAVSFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++ + YWFPKAFG+KL    G+ SFW W IGFY+AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAAMTYWFPKAFGFKLNERLGRYSFWCWFIGFYLAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G   IA+GI   + Q++VS R R   +D+TGDPWNGRTLEW+TSSPP
Sbjct: 488 NPEWQPYLIVALVGAFFIALGIWFLLQQVVVSIRDRKQNLDLTGDPWNGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P +   D  W  K+    +  PK K++DI MP+NT  GI IS F L+MGFAL
Sbjct: 548 PFYNFAHVPHVDALDQHWEDKERGIAYVQPK-KYEDIHMPRNTGAGIYISAFGLVMGFAL 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +WH+W L  +  +  +   I   ++   +YY+ + E+  IE + 
Sbjct: 607 IWHIWWLAAVGLVGMIGCFIARVYDRDVDYYVPAAEVERIENEH 650


>gi|251790654|ref|YP_003005375.1| cytochrome o ubiquinol oxidase subunit I [Dickeya zeae Ech1591]
 gi|247539275|gb|ACT07896.1| cytochrome o ubiquinol oxidase, subunit I [Dickeya zeae Ech1591]
          Length = 663

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAVMMR QQ ++     G+L P HY+QIFTAHGVIMIFFVA P + G++N  V
Sbjct: 68  MMLRGFADAVMMRGQQVLASAGEAGFLNPHHYDQIFTAHGVIMIFFVATPFIVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL IGEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVVLINISLGIGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTNILI+AAFP+LT
Sbjct: 188 DYWIWSLQISGVGTTLTGVNFFATIMKMRAPGMTLMKMPVFTWTALCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFGI+SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGIYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHSAMLWTTGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G  LIA+G+L  IIQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPEFHPLLVVASIGAGLIALGVLCQIIQFAVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++W  K+    + K  ++++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHVQDRDAFWESKEKGEAYRKPAQYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W++W L II F+  +   I ++FN   +YY+  +E+  IE + 
Sbjct: 608 WYIWWLAIIGFVGMVATWIVHSFNQDVDYYVPVKEVEQIENQN 650


>gi|420607535|ref|ZP_15099311.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-12]
 gi|420833731|ref|ZP_15300301.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-99]
 gi|391473498|gb|EIR30872.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-12]
 gi|391708096|gb|EIT39381.1| cytochrome o ubiquinol oxidase, subunit I [Yersinia pestis PY-99]
          Length = 646

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 51  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+ + G +L+ ISL +GEFA TGWL  PPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVAFPFLNSLSFWLFAVGVVLINISLGVGEFAQTGWLASPPLSGIEYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT
Sbjct: 171 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 231 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 291 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 351 FTMYQGRIQINSAMLWTIGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 411 VVFGCFAGLTYWWPKSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 471 NPEFHTMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA+V
Sbjct: 531 PFYNFAVVPNVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMV 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L II F+  ++  I  +F+   +YY+ + E+  IE 
Sbjct: 591 WYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPAAEVERIEN 631


>gi|455641809|gb|EMF20980.1| cytochrome o ubiquinol oxidase subunit I [Citrobacter freundii GTC
           09479]
          Length = 663

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++Q++GIGT L+GIN   TIIKMRAPGM +  MP+F+W +LC NILI+A+FP+LT
Sbjct: 188 DYWIWAVQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS++VWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFVVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIALGILCQLIQIYVSIRDRELNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVITAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|238025055|ref|YP_002909287.1| ubiquinol oxidase subunit I [Burkholderia glumae BGR1]
 gi|237879720|gb|ACR32052.1| Ubiquinol oxidase subunit I [Burkholderia glumae BGR1]
          Length = 671

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/587 (63%), Positives = 466/587 (79%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRTQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMAFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+ GAIL+MISLFIGEFA TGWL YPPLS +A SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVGAILLMISLFIGEFAQTGWLAYPPLSELAYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 187 DYYIWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN+MMY+NLIW WGHPEVYIL+LP FG+FSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDGGGNVMMYLNLIWAWGHPEVYILILPAFGVFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWT+GFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSAPILWTLGFMVTFTVGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GF  AF PLY+LGFMGVTRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNEKLGKRAFWFWQLGFIFAFTPLYVLGFMGVTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W ++A FG +L+ +GI+  ++QL VS R R+     D+TGDPWNG TLEW+TSS
Sbjct: 487 NPAWHPWMEVALFGAVLVLIGIVHQLLQLYVSIRDRNLPGNRDLTGDPWNGHTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP  YNFA IP IH+ D   Y K+    F  +K   ++DI MP NT+ G  I +FSL++G
Sbjct: 547 PPAPYNFAIIPTIHELDEVSYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGMFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I+ F+  +   I  +      YYI ++ +  IE++R
Sbjct: 607 FAGVWHIWWLAIVGFVGIVATAIIYSSQKNEGYYIPADTVRKIEEQR 653


>gi|320540330|ref|ZP_08039982.1| cytochrome o ubiquinol oxidase subunit I [Serratia symbiotica str.
           Tucson]
 gi|320029650|gb|EFW11677.1| cytochrome o ubiquinol oxidase subunit I [Serratia symbiotica str.
           Tucson]
          Length = 673

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+     G+LPP HY+QIFTAHGVIMIFF+AMPLV G++N +V
Sbjct: 78  MLLRGFADAIMMRSQQAIASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPLVVGLMNIVV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 138 PLQIGARDVAFPFLNSLSFWLFVVGVMLINLSLGVGEFAQTGWLAYPPLSGKEYSPGVGV 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW  LCTN+LI+ AFP+LT
Sbjct: 198 DYWIWSLQISGLGTLLTGVNFFATIMKMRAPGMPLMKMPVFTWAVLCTNVLIIVAFPILT 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 258 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR FGY+S+V+AT+ ITLLS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 318 KRQFGYTSLVWATIAITLLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWT+GF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 378 FTMYQGRIQFNSIMLWTVGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG++L   WG  +FW W+IGF++AFMPLY LGFMG+TRR+S   
Sbjct: 438 VVFGCFAGLTYWFPKSFGFRLNEKWGIRAFWCWIIGFFIAFMPLYALGFMGMTRRISQNI 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA G+L  +IQ+ VS   R    D+TGDPW+ RTLEWSTSSPP
Sbjct: 498 NPEFHPLLLVAACGAALIACGVLCQLIQIFVSVCDREQNRDLTGDPWDARTLEWSTSSPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K  K++ I MPKNT  G++I+ FSL+ GFA++
Sbjct: 558 PFYNFAVVPQIHDRDEFWDMKEKGEAYKKPAKYEPIHMPKNTGAGVIIAGFSLVFGFAMI 617

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W++W + I  F+  ++  I  +F+   +YY+  +EI  IE + 
Sbjct: 618 WNIWWMAIAGFVGMIVTWIAKSFDEDIDYYVQVDEIERIENQH 660


>gi|238783616|ref|ZP_04627637.1| Ubiquinol oxidase subunit 1 [Yersinia bercovieri ATCC 43970]
 gi|238795549|ref|ZP_04639064.1| Ubiquinol oxidase subunit 1 [Yersinia mollaretii ATCC 43969]
 gi|238715494|gb|EEQ07485.1| Ubiquinol oxidase subunit 1 [Yersinia bercovieri ATCC 43970]
 gi|238720668|gb|EEQ12469.1| Ubiquinol oxidase subunit 1 [Yersinia mollaretii ATCC 43969]
          Length = 663

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/581 (64%), Positives = 463/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQLNSAMLWTVGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHPMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++   D +W MK+    + +  K+++I MP+NT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPVVTDRDEFWDMKEKGEAYKRPAKYEEIHMPRNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L I+ F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIVGFVGMIVTWIVKSFDEDVDYYVPVAEVERIED 648


>gi|377576806|ref|ZP_09805790.1| cytochrome o ubiquinol oxidase subunit I [Escherichia hermannii
           NBRC 105704]
 gi|377542838|dbj|GAB50955.1| cytochrome o ubiquinol oxidase subunit I [Escherichia hermannii
           NBRC 105704]
          Length = 663

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ +      G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLVRGFADAIMMRTQQLLVSAGETGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTWTALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWTALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSEV STFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEVTSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSAMLWTIGFIVTFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFGY +   WGK +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGYTMNETWGKRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +A  G LLIA GIL  ++Q+ VS R R+   D+TGDPW GRTLEW+ +SPP
Sbjct: 488 DPMFMPLMVVAEIGALLIACGILCIVLQIFVSVRDRNKNRDLTGDPWGGRTLEWAIASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI I +FS I GFA++
Sbjct: 548 PFYNFAMVPEVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSAAGIYIGLFSTIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E + 
Sbjct: 608 WHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQH 650


>gi|238750999|ref|ZP_04612495.1| Ubiquinol oxidase subunit 1 [Yersinia rohdei ATCC 43380]
 gi|238710689|gb|EEQ02911.1| Ubiquinol oxidase subunit 1 [Yersinia rohdei ATCC 43380]
          Length = 663

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/581 (64%), Positives = 461/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRGQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   S GVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSTGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYIGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSAMLWTIGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEFHPMLMVAACGAALIACGILCQVIQVYVSVRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MP+NT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAVVPEVVDRDEFWDMKEKGEAYKRPAKYEEIHMPRNTGAGVIIAGFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L II F   ++  I  +F+   +YY+   E+  IE 
Sbjct: 608 WYIWWLAIIGFAGMIVTWIVKSFDEDVDYYVPVAEVERIEN 648


>gi|383816706|ref|ZP_09972098.1| cytochrome O ubiquinol oxidase subunit I [Serratia sp. M24T3]
 gi|383294418|gb|EIC82760.1| cytochrome O ubiquinol oxidase subunit I [Serratia sp. M24T3]
          Length = 663

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 455/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++   S G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLIRGFADAVMMRTQQVMASDGSPGFLPPHHYDQIFTAHGVIMIFFMAMPFVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN+SFW T+   +L+ ISL IGEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNISFWFTAVAVVLINISLGIGEFAQTGWLAYPPLSGKLYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATIMKMRAPGMPLMKMPVFTWAALCTNVLIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+L++IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLAFIVWLHHFFTMGSGANVNAFFGIMTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI     +LWTIGF+ITF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRITLNAAMLWTIGFIITFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNEKWGVRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AAFG  LIA GI    I   VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 DPQFHTLLCVAAFGAFLIACGIACIFIMFWVSVRDRELNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D +W MK+    + K  K++ I MPKN+  G +I++ SL  GFA +
Sbjct: 548 PFYNFAIVPHIHDRDEFWDMKEKGTAYKKPAKYEKIHMPKNSGAGFVIAVCSLAFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W MW L I  F   +I  I+ +F+   +YY+S EE+  IE + 
Sbjct: 608 WDMWWLVIAGFAGVVITWIWKSFDEDVDYYVSVEEVERIENQH 650


>gi|157369332|ref|YP_001477321.1| cytochrome o ubiquinol oxidase subunit I [Serratia proteamaculans
           568]
 gi|157321096|gb|ABV40193.1| Cytochrome o ubiquinol oxidase subunit I [Serratia proteamaculans
           568]
          Length = 663

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/584 (64%), Positives = 462/584 (79%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM LM MP+FTW ALCTN+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATIMKMRAPGMPLMKMPVFTWAALCTNVLIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGFHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQLNSAMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPK+FG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKSFGFTLNETWGIRAFWFWIIGFFVAFMPLYALGFMGMTRRISQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPP
Sbjct: 488 NPEFHPLLLVAAGGAALIACGILCQLIQIYVSVRDREQNRDLTGDPWGARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P IH  D +W MK+  N +K P  K++ I MPKNT  G++I+ FSL+ GFA+
Sbjct: 548 PFYNFAVVPQIHDRDEFWDMKEKGNAYKKPA-KYEPIHMPKNTGAGVIIAGFSLVFGFAM 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W +W + I +F+  ++  I  +F+   +YY+  +EI  IE + 
Sbjct: 607 IWDIWWMAIAAFVGMIVTWIAKSFDEDVDYYVQVDEIERIENQH 650


>gi|433678785|ref|ZP_20510598.1| cytochrome o ubiquinol oxidase subunit I [Xanthomonas translucens
           pv. translucens DSM 18974]
 gi|430816053|emb|CCP41118.1| cytochrome o ubiquinol oxidase subunit I [Xanthomonas translucens
           pv. translucens DSM 18974]
          Length = 666

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/586 (64%), Positives = 459/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G + G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQAMAHGGNEGIFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALVNISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN   TI++MR PGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQISGLGTLLTGINFFVTILRMRTPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++TFSS
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+R   P+LWTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVRMTAPVLWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W++GF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNETLGKASFWCWIVGFFVAFMPLYVLGFMGMTRRMNSYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  ++ MGI   ++Q+  S  KR   +D+TGDPW GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLMVAAVGAAIVGMGIFLNLVQIGYSIWKRKDNLDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K     + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWEDKLKGKGWTRPAKYEPIHMPRNTAAGVWIGAFSVVLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + II  +  +   I  TF+   +Y++ +EE+  IE  R  L
Sbjct: 608 WHIWWMAIIGLVGMIGSFIARTFDDDVDYWVPAEEVERIENARFAL 653


>gi|386332259|ref|YP_006028428.1| cytochrome o ubiquinol oxidase, subunit i [Ralstonia solanacearum
           Po82]
 gi|334194706|gb|AEG67891.1| cytochrome o ubiquinol oxidase, subunit i [Ralstonia solanacearum
           Po82]
          Length = 659

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/584 (64%), Positives = 459/584 (78%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAVMMRSQLALASGGGTGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +LV +SL +G FA TGWL YPPLS +A SP VGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELAYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNTAGGNPMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVWATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI +WFPKAFG+KL+  WGK +FW W +GFY+AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITFWFPKAFGFKLDEKWGKRAFWCWFVGFYMAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  LIA GI S +IQ+ VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVCGAALIACGIASQLIQIFVSIRNRKALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P++   D++  MK    + P      ++ I MPKNT  G ++ +FS++MGF 
Sbjct: 548 AHYNFASVPVVRDIDAFADMKARG-EVPTQVAASYEKIHMPKNTGAGFIMGMFSVVMGFG 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W +  +     ++  I+ + N   +YY+ ++E+   E  
Sbjct: 607 LIWHIWWMAALGLAGMIVSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|83747513|ref|ZP_00944551.1| Cytochrome O ubiquinol oxidase subunit I [Ralstonia solanacearum
           UW551]
 gi|83725827|gb|EAP72967.1| Cytochrome O ubiquinol oxidase subunit I [Ralstonia solanacearum
           UW551]
          Length = 659

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/584 (64%), Positives = 459/584 (78%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++ G   GYLPPEHY+QIFTAHGVIMIFF+AMPL+TG+IN IV
Sbjct: 68  MLLRGFADAVMMRSQLALASGGGAGYLPPEHYDQIFTAHGVIMIFFMAMPLMTGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + G +LV +SL +G FA TGWL YPPLS +A SP VGV
Sbjct: 128 PLQIGARDVAFPFLNTLSFWLAAAGVVLVNLSLGVGNFARTGWLAYPPLSELAYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N +ATI KMRAPGM LM MPIFTWTALC NILIVAAFPVLT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFVATIFKMRAPGMTLMRMPIFTWTALCANILIVAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+  HFFTN  GGN M+YVNLIWIWGHPEVYIL+LP FG+FSE+VSTFS 
Sbjct: 248 VALALLGADRYLDMHFFTNTAGGNPMLYVNLIWIWGHPEVYILILPAFGMFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMV+AT  IT+LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSMVWATAGITVLSFLVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGFMITFVIGGM GV+LAVP A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRVELNSMMLWTIGFMITFVIGGMTGVLLAVPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI +WFPKAFG+KL+  WGK +FW W +GFY+AFMPLY+LGFMG+TRR++H +
Sbjct: 428 VVFGYLAGITFWFPKAFGFKLDEKWGKRAFWCWFVGFYMAFMPLYVLGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  LIA GI S +IQ+ VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPAWQPWLIVAVCGAALIACGIASQLIQIFVSIRNRKALADVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD---KFQDILMPKNTNIGILISIFSLIMGFA 537
             YNFA +P++   D++  MK    + P      ++ I MPKNT  G ++ +FS++MGF 
Sbjct: 548 AHYNFASVPVVRDIDAFADMKARG-EVPTQVAASYEKIHMPKNTGAGFIMGMFSVVMGFG 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L+WH+W +  +     ++  I+ + N   +YY+ ++E+   E  
Sbjct: 607 LIWHIWWMAALGLAGMIVSFIFRSNNDDIDYYVPAQEVHETESA 650


>gi|390572144|ref|ZP_10252369.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
 gi|389935932|gb|EIM97835.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
          Length = 668

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/584 (63%), Positives = 469/584 (80%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A+++ S  GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRTQLALAYHSP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAILINISLLIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ++GIGTLL+G+N  ATIIKMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 187 DYYLWSLQLSGIGTLLTGVNFFATIIKMRAPGMTLMKMPVFTWTALCTNVLIMAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDGGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVISTFAR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GFM+TF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRIEFTTPVLWTLGFMVTFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+N+WFPKAFG+KL    GK +FWFW IGF+VAF PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGMNFWFPKAFGFKLNEKLGKAAFWFWQIGFWVAFTPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           + +   W  +A  G +L+A+GI   ++Q++VS R R+     D+TGDPWNGRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAELGAVLVAIGIGCQLLQIVVSIRDRNKPENRDLTGDPWNGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PP +YNFA +P++H+ D++  MK+      K  ++DI MP NT+ G  I +FSL +GFAL
Sbjct: 547 PPQIYNFATVPVVHELDAFHDMKQRG-NVEKPVYRDIHMPSNTSAGFFIGVFSLALGFAL 605

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            WH+W L I +FI  +   I  +F+   +YYI +E +  +E++ 
Sbjct: 606 TWHIWWLAIAAFIGAIGTWIARSFDNDTDYYIPAETVRLMEERN 649


>gi|253687437|ref|YP_003016627.1| cytochrome o ubiquinol oxidase subunit I [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251754015|gb|ACT12091.1| cytochrome o ubiquinol oxidase, subunit I [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 663

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMIRGFADAIMMRGQQVLASAGQEGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVILINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTTLTGVNFFATILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQSHSTMLWTTGFIITFTIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYILGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G +LI +G+L  +IQ  VS R RH   D+TGDPW GRTLEW+TSSP 
Sbjct: 488 NPEFHALLVVASIGAVLIGIGVLCQVIQFYVSIRDRHQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D++W  K+    + +   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAVVPHVDERDAFWEAKEKGEAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F   ++  I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWLAIAGFAGMIVTWIVHSFNQDVDYYVPVKEIEQIENQN 650


>gi|282600365|ref|ZP_06257569.1| cytochrome o ubiquinol oxidase, subunit I [Providencia rustigianii
           DSM 4541]
 gi|282565688|gb|EFB71223.1| cytochrome o ubiquinol oxidase, subunit I [Providencia rustigianii
           DSM 4541]
          Length = 671

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/585 (64%), Positives = 464/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 76  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 136 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N IATII+MRAPGM +M MP+F+WTALCTN+LIVAAFP+LT
Sbjct: 196 DYWLWSLQISGIGTLLTGVNFIATIIRMRAPGMSMMKMPVFSWTALCTNVLIVAAFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSEV +TFS 
Sbjct: 256 VTLTLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEVAATFSK 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT++S++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 316 KRLFGYTSLVWATIAITVMSFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI  + P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYQGRIELKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+ GF++AFMPLYILGFMG+TRR+S   
Sbjct: 436 VVFGCFAGMTYWFPKAYGFTLNEKWGVRAFWFWITGFFLAFMPLYILGFMGMTRRLSQNI 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +       AA G  LIA+GI   +IQ+IVS R RH   D+TGDPW GRTLEW+TSSP 
Sbjct: 496 DPAYHGMLVAAACGAGLIALGIACQVIQIIVSIRDRHENRDLTGDPWGGRTLEWATSSPA 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D+WW MK+      K   +++I MPKNT  G++I+ FSLI+GFA++
Sbjct: 556 PFYNFAIEPQVQTRDAWWDMKEKGIAHKKPTSYEEIHMPKNTGAGVIIAGFSLILGFAMI 615

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 616 WHIWWLAIVGFGGMIVTWIVKSFDEDVDYYVPVAEIEQIENKHFE 660


>gi|403057513|ref|YP_006645730.1| cytochrome o ubiquinol oxidase subunit I [Pectobacterium
           carotovorum subsp. carotovorum PCC21]
 gi|402804839|gb|AFR02477.1| cytochrome o ubiquinol oxidase, subunit I [Pectobacterium
           carotovorum subsp. carotovorum PCC21]
          Length = 663

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMIRGFADAIMMRGQQVLASAGQEGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVILINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTTLTGVNFFATILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQSHSTMLWTTGFIITFTIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G +LI +G+L  +IQ  VS R RH   D+TGDPW GRTLEW+TSSP 
Sbjct: 488 NPEFHALLVVASIGAVLIGIGVLCQVIQFYVSIRDRHQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D++W  K+    + +   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAVVPHVDERDAFWEAKEKGEAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F   ++  I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWLAIAGFAGMIVTWIVHSFNQDVDYYVPVKEIEQIENQN 650


>gi|294664343|ref|ZP_06729707.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292605883|gb|EFF49170.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 666

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/586 (64%), Positives = 461/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G   G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGGGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IEK R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIEKARFAL 653


>gi|212709189|ref|ZP_03317317.1| hypothetical protein PROVALCAL_00222 [Providencia alcalifaciens DSM
           30120]
 gi|212688101|gb|EEB47629.1| hypothetical protein PROVALCAL_00222 [Providencia alcalifaciens DSM
           30120]
          Length = 671

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/585 (64%), Positives = 463/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 76  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 136 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATII+MRAPGM +M MP+F+W A CTNILI+AAFP+LT
Sbjct: 196 DYWIWSLQISGIGTLLTGVNFFATIIRMRAPGMSMMKMPVFSWAAFCTNILIIAAFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 256 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSK 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 316 KRLFGYTSLVWATIVITVMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYQGRIEFKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+ GF++AFMPLYILGFMG+TRR+S   
Sbjct: 436 VVFGCFAGMTYWFPKAYGFTLNEKWGVRAFWFWITGFFLAFMPLYILGFMGMTRRLSQNI 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +       AA G  LIA+GI   +IQ+IVS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 496 DPTYHGMLVAAACGAGLIALGIACQVIQIIVSIRDRHENRDLTGDPWGGRTLEWATSSPP 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D+WW MK+      K   +++I MPKNT  G++I+ FSLI GFA++
Sbjct: 556 PFYNFAIEPQIQTRDAWWDMKEKGIAHKKPTSYEEIHMPKNTGAGVIIAAFSLIFGFAMI 615

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 616 WHIWWLAIVGFGGMIVTWIAKSFDEDVDYYVPVAEIEQIENKHFE 660


>gi|422019648|ref|ZP_16366191.1| ubiquinol oxidase polypeptide [Providencia alcalifaciens Dmel2]
 gi|414102754|gb|EKT64344.1| ubiquinol oxidase polypeptide [Providencia alcalifaciens Dmel2]
          Length = 663

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/585 (64%), Positives = 463/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATII+MRAPGM +M MP+F+W A CTNILI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATIIRMRAPGMSMMKMPVFSWAAFCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITVMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+ GF++AFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAYGFTLNEKWGVRAFWFWITGFFLAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +       AA G  LIA+GI   +IQ+IVS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPTYHGMLVAAACGAGLIALGIACQVIQIIVSIRDRHENRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   D+WW MK+      K   +++I MPKNT  G++I+ FSLI GFA++
Sbjct: 548 PFYNFAIEPQIQTRDAWWDMKEKGIAHKKPTSYEEIHMPKNTGAGVIIAAFSLIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 608 WHIWWLAIVGFGGMIVTWIAKSFDEDVDYYVPVAEIEQIENKHFE 652


>gi|420253959|ref|ZP_14756986.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. BT03]
 gi|398050407|gb|EJL42776.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. BT03]
          Length = 668

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/584 (63%), Positives = 468/584 (80%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A+++ S  GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRTQLALAYHSP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAILINISLLIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ++GIGTLL+G+N  ATIIKMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 187 DYYLWSLQLSGIGTLLTGVNFFATIIKMRAPGMTLMKMPVFTWTALCTNVLIMAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDGGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVISTFAR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GFM+TF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRIEFTTPVLWTLGFMVTFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+N+WFPKAFG+KL    GK +FWFW IGF+VAF PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGMNFWFPKAFGFKLNEKLGKAAFWFWQIGFWVAFTPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           + +   W  +A  G +L+A+GI   ++Q++VS R R+     D+TGDPWNGRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAELGAVLVAIGIGCQLLQIVVSIRDRNKPENRDLTGDPWNGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PP +YNFA +P++H+ D++  MK       K  ++DI MP NT+ G  I +FSL +GFAL
Sbjct: 547 PPQIYNFATVPVVHELDAFHDMKARG-NVEKPVYRDIHMPSNTSAGFFIGVFSLALGFAL 605

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            WH+W L I +FI  +   I  +F+   +YYI +E +  +E++ 
Sbjct: 606 TWHIWWLAIAAFIGAIGTWIARSFDNDTDYYIPAETVRLMEERN 649


>gi|332290093|ref|YP_004420945.1| cytochrome C and Quinol oxidase polypeptide I [Gallibacterium
           anatis UMN179]
 gi|330432989|gb|AEC18048.1| Cytochrome C and Quinol oxidase polypeptide I [Gallibacterium
           anatis UMN179]
          Length = 660

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/585 (63%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ +S G   G+LPPEHY+QIFTAHGVIMIFFVAMP V G++N ++
Sbjct: 68  MLIRGFADAIMMRSQQFLSSGGYAGFLPPEHYDQIFTAHGVIMIFFVAMPFVIGLMNIVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNL FW T+   +L+ +SL +GEFA TGWL YPPLS +  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNNLGFWFTAVSVVLINLSLGVGEFAKTGWLAYPPLSELQYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT LS IN IATI+KMRAPGM LM MPIF W + C+N+LI+ +FP+LT
Sbjct: 188 DYWIWTLQISGIGTTLSAINFIATILKMRAPGMSLMKMPIFCWASFCSNVLILTSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+GTHFFTNDLGGN+MMY+NLIW WGHPEVYILVLP+FG+++EV +TFS 
Sbjct: 248 ASVALLTLDRYLGTHFFTNDLGGNMMMYINLIWAWGHPEVYILVLPMFGVYAEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY+SMV+ATV IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKMFGYTSMVWATVCITILSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+  VP+LWTIGF++TF IGGM GV+LAVPAA+F+LH S+FL+AHFHN IIGG
Sbjct: 368 FTMYQGRIKLSVPMLWTIGFIVTFAIGGMTGVLLAVPAADFVLHGSVFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FGL +G+NYWFPKAFG+ L   WGK +FW W IGF VAF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGLFAGLNYWFPKAFGFTLNEKWGKRAFWCWQIGFIVAFLPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G ++IA+GI    IQL VS R R+   D TGDPW GRTLEW+TSSPP
Sbjct: 488 DPEYHTLLGVAALGAVIIALGIACQFIQLGVSIRDRNKNRDTTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D++W  K+    + K   +  I MPKNT  G++I++F++I GFA++
Sbjct: 548 PFYNFAVTPRVEDRDAFWDNKEKGVAYAKPTTYAPIHMPKNTAAGVIIAVFTMIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+SF+  ++  I  +F+   +YY+  ++I  IE K  +
Sbjct: 608 WHIWWLAIVSFVGMVVTWIAKSFDQDVDYYVPVDQIETIENKHFK 652


>gi|440736871|ref|ZP_20916454.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fluorescens
           BRIP34879]
 gi|440382632|gb|ELQ19126.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fluorescens
           BRIP34879]
          Length = 657

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/585 (61%), Positives = 463/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++     GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLSG+A SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSGLAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTW ALCT++LI+AAFP+LT
Sbjct: 188 DYYIWSLQISGIGTLLTGVNFFVTILKMRTEGMTLFKMPVFTWNALCTSVLILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+G HFFTN+ GGN MMYVNLIW WGHPEVYIL+LP FG+FSE+ +TFSS
Sbjct: 248 ATLLMLSLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+G NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYVSLVWATISITVLSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVRFETPMLWTLGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG M+G+ YWFPKAFG++L    G+ +FW WL GFY AFMP Y+LGFMG+TRR++HF+
Sbjct: 428 ALFGYMAGLTYWFPKAFGFRLNDRLGRIAFWCWLTGFYFAFMPSYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I  G+ +  +QL VS R+RH   D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPQWRPWLLLELLGVAIILCGVAAQALQLFVSIRRRHRYRDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA  P +   D++W MK+          ++ I MP+NT  G++IS+F+LI GFALV
Sbjct: 548 PLYNFAEQPKVSDLDAYWGMKERGVSTLSHTDYRSIHMPRNTASGLVISLFTLICGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +     + +++  +  +++   +Y++ ++E+  IE  R++
Sbjct: 608 WHIWWMAAFGLVASVVTFVVRSYDEDTDYFVPAQEVARIEAARLK 652


>gi|317047169|ref|YP_004114817.1| cytochrome o ubiquinol oxidase subunit I [Pantoea sp. At-9b]
 gi|316948786|gb|ADU68261.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. At-9b]
          Length = 660

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/583 (65%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNVAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAIGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTW ALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMDLFKMPVFTWAALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+EV +TFS 
Sbjct: 248 VTLALLTLDRYLDFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFHSAMLWTIGFLVTFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRVSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +I   VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHSLLVVAACGAALIACGILCQLIMFYVSVRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + +  K+++I MPKN+   I+I+ F  I GFA +
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYQQPAKYEEIHMPKNSGAAIVIAAFGTIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L +++F+  +I  I  +F+   +YY+   EI  IEKK 
Sbjct: 608 WHIWWLVVVAFLGMIISWIVKSFDEDVDYYVPVAEIEQIEKKH 650


>gi|261218046|ref|ZP_05932327.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti M13/05/1]
 gi|261321104|ref|ZP_05960301.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti M644/93/1]
 gi|260923135|gb|EEX89703.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti M13/05/1]
 gi|261293794|gb|EEX97290.1| cytochrome o ubiquinol oxidase subunit I [Brucella ceti M644/93/1]
          Length = 660

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/586 (64%), Positives = 471/586 (80%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DAVMMR QQA++ G++ G+LPP HY+QIFTAHGVIMIFFVAMP + G++NF+V
Sbjct: 68  MLFRGFSDAVMMRAQQALASGANEGFLPPHHYDQIFTAHGVIMIFFVAMPFIVGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+T  GAILV ISL +GEFA TGWL YPPLSG A SP VG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLTVAGAILVNISLGVGEFAKTGWLAYPPLSGKAFSPDVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIAT-IIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           DYY+W+L I+G+GTLLS +N+I T IIKMRAPGM +M +P+FTWTALC+N+LIVAAFP+L
Sbjct: 188 DYYLWALNISGMGTLLSAVNLITTTIIKMRAPGMGMMQLPVFTWTALCSNVLIVAAFPIL 247

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T  L L TLDRY+  HFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+++TFS
Sbjct: 248 TVTLSLLTLDRYLDFHFFTNDAGGNPMMYVNLIWIWGHPEVYILVLPCFGIYSEIIATFS 307

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
            K LFGY+SMVYATV IT+LS++VW HHFFTMG GA+VN+FFG+ TMIISIPTGAK+FNW
Sbjct: 308 GKHLFGYTSMVYATVAITVLSFLVWAHHFFTMGGGASVNSFFGVATMIISIPTGAKVFNW 367

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GR+R E P++WTIGFM TFVIGGM GV+LAVP A+F+LHNS+FL+AHFHNVII 
Sbjct: 368 LFTMYKGRVRMETPVMWTIGFMCTFVIGGMTGVLLAVPPADFVLHNSVFLIAHFHNVIIS 427

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GVLFG  +G+ YW+PKAFG+KL    GK +FW WL+GF +AFMPLY+LG MG+TRR++H 
Sbjct: 428 GVLFGCFAGVVYWWPKAFGFKLNERLGKSAFWCWLVGFMLAFMPLYVLGLMGMTRRLNHT 487

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSS 478
           E+ +  I+  IAA G  +I  GI+  I+Q++VS R R  L D  GD W +GRTLEWS SS
Sbjct: 488 ENPAWHIYLIIAAIGVAIILCGIVCQILQIMVSIRDRDKLRDTNGDTWGSGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA  P +   D+WW MK+N +    +KF  I MPKNT  G L+ I S+  GFA+
Sbjct: 548 PPPFYNFAETPTVRDHDAWWDMKQNGYVRRTEKFARIHMPKNTATGFLVGILSIPFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L I S +   ++ I ++FN  R+YY+S++E+  +E  R R
Sbjct: 608 IWHIWWLAIASALAMFVVAIAHSFNNDRDYYVSADEVQRVEDARTR 653


>gi|291616543|ref|YP_003519285.1| CyoB [Pantoea ananatis LMG 20103]
 gi|378768268|ref|YP_005196739.1| cytochrome o ubiquinol oxidase subunit I CyoB [Pantoea ananatis LMG
           5342]
 gi|386014915|ref|YP_005933192.1| ubiquinol oxidase polypeptide I CyoB [Pantoea ananatis AJ13355]
 gi|386080403|ref|YP_005993928.1| cytochrome o ubiquinol oxidase subunit I CyoB [Pantoea ananatis
           PA13]
 gi|291151573|gb|ADD76157.1| CyoB [Pantoea ananatis LMG 20103]
 gi|327392974|dbj|BAK10396.1| ubiquinol oxidase polypeptide I CyoB [Pantoea ananatis AJ13355]
 gi|354989584|gb|AER33708.1| cytochrome o ubiquinol oxidase subunit I CyoB [Pantoea ananatis
           PA13]
 gi|365187752|emb|CCF10702.1| cytochrome o ubiquinol oxidase subunit I CyoB [Pantoea ananatis LMG
           5342]
          Length = 660

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRTQQVLASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAIGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTW +LCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMDLFKMPVFTWASLCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  II   VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHSLLVVAAGGAALIACGILCQIIMFYVSVRDRDQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + +  K+++I MPKN+   I+I+ F+ I GFA++
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYKQPAKYEEIHMPKNSGAAIVIAAFATIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   E+  IEK+ 
Sbjct: 608 WHIWWLAGLSFLGMIVSWIVKSFDEDVDYYVPVAEVEKIEKQH 650


>gi|253990902|ref|YP_003042258.1| Ubiquinol oxidase polypeptide I (Cytochrome O subunit 1) (Oxidase
           BO(3) subunit 1) (Cytochrome O ubiquinol oxidase subunit
           1) (Ubiquinol oxidase chain A) [Photorhabdus
           asymbiotica]
 gi|253782352|emb|CAQ85516.1| Ubiquinol oxidase polypeptide I (Cytochrome O subunit 1) (Oxidase
           BO(3) subunit 1) (Cytochrome O ubiquinol oxidase subunit
           1) (Ubiquinol oxidase chain A) [Photorhabdus
           asymbiotica]
          Length = 663

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/583 (63%), Positives = 458/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MMLRGFADAIMMRGQQAVASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G  L+ ISL IGEFA TGWL YPPLSGI  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVALINISLGIGEFAQTGWLAYPPLSGIEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI++MRA GM +M MP+F+W ALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATILRMRALGMSMMKMPVFSWAALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTIALLTFDRYMGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI ++ P+LWT+GF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEYKTPMLWTVGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPK+FG+ L   WG  +FWFW+ GF++AFMP+Y LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGTAYWFPKSFGFTLNEKWGVRAFWFWITGFFIAFMPVYALGFMGMTRRISQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        ++A G  LIA+GIL  +IQ  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPEFHTLLVVSAIGVALIAVGILCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D+WW MK+    + +  K+++I MPKN   G++I+ FSL+ GFA++
Sbjct: 548 PFYNFADVPHVQTRDAWWDMKEKGTAYKRPAKYEEIHMPKNAGAGVIIAGFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I  F   +I  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWMAIAGFAGMIITWIVKSFDEDVDYYVPVAEVEQIENQH 650


>gi|398798182|ref|ZP_10557483.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. GM01]
 gi|398100899|gb|EJL91127.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. GM01]
          Length = 660

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/583 (64%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAIGVILVNISLGVGEFAQTGWLAYPPLSGVEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTW +LCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMDLFKMPVFTWASLCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+EV +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   +LWTIGF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRVEFHSAMLWTIGFLVTFSIGGMTGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNEKWGIRAFWFWIIGFFVAFMPLYALGFMGMTRRISQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  + Q  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHSLLVVAAGGAALIACGILCQLTQFYVSVRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP IH+ D++W MK+    + + +K+++I MPKN+   ++I+    + GFA++
Sbjct: 548 PFYNFAVIPHIHERDAFWEMKEKGEAYKQPEKYEEIHMPKNSGAAVVIAALMTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  ++F+ T++  I  +F+   +YY+   E+  IEKK 
Sbjct: 608 WHIWWLAGLTFVGTIVTWIVKSFDEDVDYYVPVAEVEQIEKKH 650


>gi|418517649|ref|ZP_13083809.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. malvacearum str. GSPB1386]
 gi|418520766|ref|ZP_13086814.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. malvacearum str. GSPB2388]
 gi|410703651|gb|EKQ62142.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. malvacearum str. GSPB2388]
 gi|410705628|gb|EKQ64098.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. malvacearum str. GSPB1386]
          Length = 666

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/586 (64%), Positives = 460/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G   G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGGGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKQHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|227113459|ref|ZP_03827115.1| cytochrome O ubiquinol oxidase subunit I [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 663

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMIRGFADAIMMRGQQVLASAGQEGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVVLINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGVGTTLTGVNFFATILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQSHSTMLWTTGFIITFTIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G +LI +G+L  +IQ  VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 NPEFHALLVVASIGAVLIGIGVLCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I+  D++W  K+    + +   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHINDRDAFWEAKEKGEAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F   ++  I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWLAIAGFAGMIVTWIVHSFNQDVDYYVPVKEIEQIENQN 650


>gi|21242012|ref|NP_641594.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|325928654|ref|ZP_08189833.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Xanthomonas
           perforans 91-118]
 gi|346724148|ref|YP_004850817.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. citrumelo F1]
 gi|381170648|ref|ZP_09879803.1| cytochrome o ubiquinol oxidase, subunit I [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
 gi|21107410|gb|AAM36130.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|325540982|gb|EGD12545.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Xanthomonas
           perforans 91-118]
 gi|346648895|gb|AEO41519.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas axonopodis
           pv. citrumelo F1]
 gi|380688902|emb|CCG36290.1| cytochrome o ubiquinol oxidase, subunit I [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
          Length = 666

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/586 (64%), Positives = 460/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G   G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGGGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|398792064|ref|ZP_10552762.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. YR343]
 gi|398214196|gb|EJN00779.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. YR343]
          Length = 660

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/583 (65%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAIGVILVNISLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTW +LCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMDLFKMPVFTWASLCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+EV +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   +LWTIGF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRVEFHSAMLWTIGFLVTFSIGGMTGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNEKWGIRAFWFWIIGFFVAFMPLYALGFMGMTRRISQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  I Q  VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHSLLVVAAGGAALIACGILCQITQFYVSVRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP IH+ D++W MK+    + + +K+++I MPKN+   I+I+    + GFA++
Sbjct: 548 PFYNFAVIPHIHERDAFWEMKEKGEAYKQPEKYEEIHMPKNSGAAIVIAALMTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  ++F+ T++  I  +F+   +YY+   E+  IEKK 
Sbjct: 608 WHIWWLAGLTFLGTIVTWIVKSFDEDVDYYVPVAEVEQIEKKH 650


>gi|421083038|ref|ZP_15543917.1| Cytochrome o ubiquinol oxidase subunit 1 [Pectobacterium wasabiae
           CFBP 3304]
 gi|401702264|gb|EJS92508.1| Cytochrome o ubiquinol oxidase subunit 1 [Pectobacterium wasabiae
           CFBP 3304]
          Length = 663

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMIRGFADAIMMRGQQVLASAGHEGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVVLINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTTLTGVNFFATILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHSTMLWTTGFIITFTIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                    +A+ G +LI +G+L  +IQ  VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 SPEFHTLLVVASVGAVLIGIGVLCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I + D++W  K+    + +   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHIDERDAFWEAKEKGEAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F   ++  I ++FN   +YY++ +EI  IE + 
Sbjct: 608 WHIWWLAIAGFAGMIVTWIVHSFNQDVDYYVTVKEIEQIENQN 650


>gi|295699445|ref|YP_003607338.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia sp.
           CCGE1002]
 gi|295438658|gb|ADG17827.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp.
           CCGE1002]
          Length = 673

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/584 (63%), Positives = 467/584 (79%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+S+ S  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALSYLSP-GYLPPHHYDQIFTAHGVIMIFFMAMTFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+T+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWLTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWT+LC N+LI+A+FP+LT
Sbjct: 187 DYYLWSLQISGVGTLLTGVNFFVTIVKMRAPGMSWMKMPVFTWTSLCANVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGIFSEVV+TF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIFSEVVATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MV+AT  I +LS++VWLHHFFTMGSGA+VNAFFGI TM+ISIPTG K+FNWL
Sbjct: 307 KPLFGYKTMVWATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMVISIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR++F  P+LWTIGF+ITF IGGM GV+LA+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYKGRLQFTTPVLWTIGFIITFTIGGMTGVMLAIPGADFMLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW IGF+VAF PLY+LGFMG TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQIGFWVAFTPLYVLGFMGATRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           +     W  IAAFG +LIA+GI   ++QL+VS R R+ +   D+TGDPW+G TLEW+TSS
Sbjct: 487 NPDWHPWMIIAAFGAVLIAIGIACQLLQLVVSLRDRNKVENRDLTGDPWDGHTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPPVYNFA IP +   D++  MK          ++DI MP NT+ G+L+ +FSL++GFA 
Sbjct: 547 PPPVYNFAHIPDVRSLDAFSEMKSRKGGVKVPAYRDIHMPSNTSAGLLVGLFSLVLGFAA 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           VWH+W L I+  + T++ VI  +F     YYI ++ +  IE+KR
Sbjct: 607 VWHIWWLAIVGLVGTMLTVIIYSFMDNDGYYIPADTVALIEEKR 650


>gi|433550582|ref|ZP_20506626.1| Cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           IP 10393]
 gi|431789717|emb|CCO69666.1| Cytochrome O ubiquinol oxidase subunit I [Yersinia enterocolitica
           IP 10393]
          Length = 662

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/581 (64%), Positives = 462/581 (79%), Gaps = 2/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMAMPFVVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG   +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGKEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW ALCTNILI+ +FP+LT
Sbjct: 188 DYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAALCTNILIIVSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+L +IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVL-FIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYQGRIQFNSAMLWTVGFIITFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 427 VVFGCFAGLTYWWPKSFGFTLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 487 NPEFHPMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA++
Sbjct: 547 PFYNFAVVPEVTDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           W++W L I+ F+  ++  I  +F+   +YY+   E+  IE 
Sbjct: 607 WYIWWLAIVGFVGMIVTWIVKSFDEDVDYYVPVAEVERIED 647


>gi|447916814|ref|YP_007397382.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas poae
           RE*1-1-14]
 gi|445200677|gb|AGE25886.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas poae
           RE*1-1-14]
          Length = 657

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/585 (61%), Positives = 462/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++     GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLSG+A SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSGLAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTW ALCT++LI+AAFP+LT
Sbjct: 188 DYYIWSLQISGIGTLLTGVNFFVTILKMRTEGMTLFKMPVFTWNALCTSVLILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+G HFFTN+ GGN MMYVNLIW WGHPEVYIL+LP FG+FSE+ +TFSS
Sbjct: 248 ATLLMLSLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+G NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYVSLVWATISITVLSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVRFETPMLWTLGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG M+G+ YWFPKAFG++L    G+ +FW WL GFY AFMP Y+LGFMG+TRR++HF+
Sbjct: 428 ALFGYMAGLTYWFPKAFGFRLNDRLGRIAFWCWLTGFYFAFMPSYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I  G+ +  +QL VS R+RH   D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPQWRPWLLLELLGVAIILCGVAAQALQLFVSIRRRHRYRDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA  P +   D++W MK+          ++ I MP NT  G++IS+F+LI GFALV
Sbjct: 548 PLYNFAEQPKVSDLDAYWGMKERGVSTLSHTDYRSIHMPCNTASGLVISLFTLICGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +     + +++  +  +++   +Y++ ++E+  IE  R++
Sbjct: 608 WHIWWMAAFGLVASVVTFVVRSYDEDTDYFVPAQEVARIEATRLK 652


>gi|83718236|ref|YP_438680.1| ubiquinol oxidase subunit I [Burkholderia thailandensis E264]
 gi|257141750|ref|ZP_05590012.1| ubiquinol oxidase, subunit I [Burkholderia thailandensis E264]
 gi|83652061|gb|ABC36125.1| ubiquinol oxidase, subunit I [Burkholderia thailandensis E264]
          Length = 668

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/585 (63%), Positives = 465/585 (79%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMTFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N  ATI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFATILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSPPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G +LIA+GI   ++QL+VS R R      D+TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLIVAACGAVLIAIGIACQLLQLVVSLRDRKLPGNRDLTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H  D + Y K+      K  +++DI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGTGKHAEYRDIHMPSNTSAGLFVGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+W L I      ++ VI  + +    YYI ++ +  IE+KR
Sbjct: 607 AVWHIWWLAIAGLAGIVVTVIAYSASENDGYYIPADTVRKIEEKR 651


>gi|359781942|ref|ZP_09285165.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas
           psychrotolerans L19]
 gi|359370312|gb|EHK70880.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas
           psychrotolerans L19]
          Length = 662

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/587 (64%), Positives = 469/587 (79%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQAI+ G + GYLPP HY+QIFTAHGVIMIFFVAMP V G++N + 
Sbjct: 68  MLLRGFSDAILMRSQQAIASGGAEGYLPPHHYDQIFTAHGVIMIFFVAMPFVAGLMNVVT 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA+L+M+SLF+GEFA+TGW+ YPPLSGI  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAVLIMMSLFVGEFAATGWVAYPPLSGIQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++GIGT L+G+N   T++KMR  GM LM MPIFTWT+ CT ILI+AAFP+LT
Sbjct: 188 DYYIWALQLSGIGTTLTGVNFFVTVLKMRTKGMTLMRMPIFTWTSWCTAILIMAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFT + GGN MMY NLIW WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTAEAGGNQMMYTNLIWAWGHPEVYILILPAFGVFSEVTSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+ATV IT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KRLFGYVSMVWATVAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F  P+LWT+GF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFTSPMLWTLGFIVTFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG  +G+ YWFPK FG+KL     K +FW WLIGFYVAFMPLY+LGFMG+TRR++H++
Sbjct: 428 AVFGYFAGMIYWFPKVFGFKLNEKLNKQAFWCWLIGFYVAFMPLYMLGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +     +   AA G  +IA+GILS +    VS R R+    +D+TGDPW+GRTLEWSTSS
Sbjct: 488 NPDWHPFLVTAAIGAGIIALGILSQLWMFYVSIRDRNLPENVDVTGDPWDGRTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P +H  D++W MK+      KD  ++ I MP+NT  GI+IS+F+LI+GFA
Sbjct: 548 PPPFYNFAEVPEVHDIDAYWGMKEKGITEKKDADYKQIHMPRNTGAGIVISLFALILGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           L+WH+W L I SF+  ++  +  +++   +YY+ +EE+  IE  RI+
Sbjct: 608 LIWHIWWLAIASFVGCIVTAVVRSYDDDVDYYVPAEEVARIETARIQ 654


>gi|50120081|ref|YP_049248.1| cytochrome O ubiquinol oxidase subunit I [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610607|emb|CAG74052.1| cytochrome O ubiquinol oxidase subunit I [Pectobacterium
           atrosepticum SCRI1043]
          Length = 663

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMIRGFADAIMMRGQQVLASAGQEGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVILINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTTLTGVNFFATILKMRAPGMSLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHSTMLWTTGFIITFTIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +A+ G +LI +G+L  +IQ  VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 NPEFHALLVVASIGAVLIGIGVLCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D++W  K+    + +   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHVDERDAFWEAKEKGEAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F   ++  I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWLAIAGFAGIIVTWIVHSFNQDVDYYVPVKEIEQIENQN 650


>gi|381405448|ref|ZP_09930132.1| cytochrome o ubiquinol oxidase subunit I [Pantoea sp. Sc1]
 gi|380738647|gb|EIB99710.1| cytochrome o ubiquinol oxidase subunit I [Pantoea sp. Sc1]
          Length = 660

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAIMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTWTALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMSLFKMPVFTWTALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+E+ +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEITATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIAMGIL  +    VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPLLVVAAVGAGLIAMGILCQLTMFYVSVRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + + + +++I MPKN+   ++I  F+ +MGFAL+
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYKQPESYEEIHMPKNSGAALVICAFATVMGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWLAGLSFLGMIVTWIVKSFDEDVDYYVPVAEVQKIENQH 650


>gi|294627031|ref|ZP_06705621.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292598693|gb|EFF42840.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 666

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/586 (64%), Positives = 460/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G   G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGGGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  +++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSRYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|372276426|ref|ZP_09512462.1| cytochrome o ubiquinol oxidase subunit I [Pantoea sp. SL1_M5]
 gi|390435710|ref|ZP_10224248.1| cytochrome o ubiquinol oxidase subunit I [Pantoea agglomerans IG1]
          Length = 660

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLIRGFADAIMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTWTALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMSLFKMPVFTWTALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+E+ +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEITATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +    VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHTLLVVAAGGAGLIALGILCQLTMFYVSVRDRDQNRDVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + + + +++I MPKN+   I+I  F+ +MGFAL+
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYKQPESYEEIHMPKNSGAAIIICAFATVMGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWLAGVSFLGMIVSWIVKSFDEDVDYYVPVAEVQKIENQH 650


>gi|424905711|ref|ZP_18329214.1| product [Burkholderia thailandensis MSMB43]
 gi|390928604|gb|EIP86008.1| product [Burkholderia thailandensis MSMB43]
          Length = 668

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/585 (62%), Positives = 464/585 (79%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM +M MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTMMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL+VS R R      D+TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLIVAACGAGLIAIGIACQLLQLVVSLRDRKLPGNRDLTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H  D + Y K       K  +++DI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPAYNFATIPTVHTLDEFAYRKGRGLGLGKQAEYRDIHMPSNTSAGLFVGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+W L I S +  ++ VI  + +    YYI ++ +  IE+KR
Sbjct: 607 AVWHIWWLAIASLVGIVVTVIAYSASDNDGYYIPADAVRKIEEKR 651


>gi|300715585|ref|YP_003740388.1| ubiquinol oxidase subunit I [Erwinia billingiae Eb661]
 gi|299061421|emb|CAX58533.1| Ubiquinol oxidase subunit 1 [Erwinia billingiae Eb661]
          Length = 663

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G +LV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVVLVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+A+FPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITILSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LA+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLALPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWFPKAFGFCLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AAFG  LIA G+L  I Q  VS R R  L D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPLLVVAAFGAALIACGVLCQITQFWVSVRDREQLRDVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P+IH+ D++W MK+    + +   +++I MPKN+  G++I  FSL+ GFA +
Sbjct: 548 PFYNFAEVPVIHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGVVIGAFSLVFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   EI  IE + 
Sbjct: 608 WHIWWLVGLSFLGMILTWIIKSFDEDVDYYVPVAEIEKIENQH 650


>gi|330821327|ref|YP_004350189.1| Ubiquinol oxidase subunit I [Burkholderia gladioli BSR3]
 gi|327373322|gb|AEA64677.1| Ubiquinol oxidase, subunit I [Burkholderia gladioli BSR3]
          Length = 670

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/587 (63%), Positives = 464/587 (79%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q AI++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAIAYDAP-GYLPPHHYDQIFTAHGVIMIFFMAMTFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+ GA+L+MISLFIGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVGAVLLMISLFIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FG+FSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDGGGNAMLYLNLIWAWGHPEVYILILPAFGVFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWT+GFMITF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFTAPILWTLGFMITFTVGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GF  AF PLY+LGFMGVTRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKRAFWFWQMGFIFAFTPLYVLGFMGVTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +A FG +L+ +GI+  ++QL VS R R      D++GDPWNGRTLEW+TSS
Sbjct: 487 NPAWHPWMLVALFGAVLVLIGIVHQLLQLYVSIRDRDLPGNRDVSGDPWNGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP  YNFA IP IH+ D   Y K+    F  +K   ++DI MP NT+ G  I +F+L++G
Sbjct: 547 PPASYNFAIIPTIHELDEVAYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGMFALVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I+ F+  +   I  +      YYI ++ +  IE++R
Sbjct: 607 FAGVWHIWWLAILGFVGIVATAIIYSSQKNEGYYIPADTVRKIEEQR 653


>gi|261822513|ref|YP_003260619.1| cytochrome o ubiquinol oxidase subunit I [Pectobacterium wasabiae
           WPP163]
 gi|261606526|gb|ACX89012.1| cytochrome o ubiquinol oxidase, subunit I [Pectobacterium wasabiae
           WPP163]
 gi|385872821|gb|AFI91341.1| Cytochrome o ubiquinol oxidase, subunit I [Pectobacterium sp.
           SCC3193]
          Length = 663

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 458/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVA P V G++N  V
Sbjct: 68  MMIRGFADAIMMRGQQVLASAGHEGFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVVLINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGT L+G+N  ATI+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTTLTGVNFFATILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT GF+ITF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQPHSTMLWTTGFIITFTIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYILGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                    +A+ G +LI +G+L  +IQ  VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 SPEFHTLLVVASIGAVLIGIGVLCQVIQFYVSIRDRDQNRDLTGDPWGGRTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I + D++W  K+    + +   +++I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAIVPHIDERDAFWEAKEKGEAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F   ++  I ++FN   +YY+  +EI  IE + 
Sbjct: 608 WHIWWLAIAGFAGMIVTWIVHSFNQDVDYYVPVKEIEQIENQN 650


>gi|62179054|ref|YP_215471.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|375113369|ref|ZP_09758539.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SCSA50]
 gi|62126687|gb|AAX64390.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322713515|gb|EFZ05086.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SCSA50]
          Length = 663

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIAQGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|92113083|ref|YP_573011.1| cytochrome-c oxidase [Chromohalobacter salexigens DSM 3043]
 gi|91796173|gb|ABE58312.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein
           [Chromohalobacter salexigens DSM 3043]
          Length = 659

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/587 (63%), Positives = 456/587 (77%), Gaps = 4/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q AI+ G S GYLPP HY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAIAAGGSEGYLPPHHYDQIFTAHGVIMIFFVAMPMVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+   G  L MISL IGE+  TGWL Y PLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFMNNLSFWLFVAGVALTMISLLIGEYGQTGWLAYAPLSGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW LQI+GIGT L+GIN   TI+KMR  GM +  MPIFTWT+LC NILI+A+FP+LT
Sbjct: 188 DYWIWGLQISGIGTTLTGINFFVTILKMRTKGMTMFRMPIFTWTSLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYIL+LP FG+FSEV++TF+ 
Sbjct: 248 ATIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILILPAFGVFSEVIATFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MV+AT  IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYNTMVWATACITILSFIVWLHHFFTMGAGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+LWT+GF+ITF IGGM GV+LAVP ANF+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYRGRLEFTSPVLWTLGFIITFTIGGMTGVMLAVPGANFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++G+ YWFPKAFG+KL+  WGK SFWFW++GFY+AFMPLYIL FMG  RRM  + 
Sbjct: 428 VVFGMLAGLTYWFPKAFGFKLDEKWGKRSFWFWIVGFYLAFMPLYILSFMGAVRRMQSYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q    +A  G + I  GI   +IQ IVS R R    DITGDPW+ RTLEWSTSSP 
Sbjct: 488 NPEWQPLMIVAWVGAVCILFGIACTVIQFIVSIRDRKKNADITGDPWDARTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMGFA 537
           P YNFA +P +   D++W  KK       DK   ++DI MP+NT  G +I + S+  GFA
Sbjct: 548 PFYNFAHLPNVGSIDAFWEAKKEK-GMAADKPTQYEDIHMPRNTVAGPVIGLISIAFGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           LVWH+W L  +S I   +  ++  FN   +YY+ + E+  IE++  +
Sbjct: 607 LVWHIWWLVGVSAIGMFVAFMFRVFNDDIDYYVPAAEVERIEREHHK 653


>gi|76819267|ref|YP_336150.1| ubiquinol oxidase subunit I [Burkholderia pseudomallei 1710b]
 gi|226195805|ref|ZP_03791392.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pakistan 9]
 gi|254185985|ref|ZP_04892503.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pasteur
           52237]
 gi|254265286|ref|ZP_04956151.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1710a]
 gi|254301041|ref|ZP_04968485.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 406e]
 gi|76583740|gb|ABA53214.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1710b]
 gi|157811185|gb|EDO88355.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 406e]
 gi|157933671|gb|EDO89341.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pasteur
           52237]
 gi|225932290|gb|EEH28290.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pakistan 9]
 gi|254216288|gb|EET05673.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1710a]
          Length = 668

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/585 (62%), Positives = 462/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H  D + Y K+      K  +++DI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 AVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 651


>gi|237808830|ref|YP_002893270.1| cytochrome o ubiquinol oxidase subunit I [Tolumonas auensis DSM
           9187]
 gi|237501091|gb|ACQ93684.1| cytochrome o ubiquinol oxidase, subunit I [Tolumonas auensis DSM
           9187]
          Length = 663

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G S G+L   HY+QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFADAIMMRLQLMLASGGSEGFLNAHHYDQIFTAHGVIMIFFMAMPFMVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G  L+ ISL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFIVGVALMNISLGVGEFAQTGWLAYPPLSGHQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N   TI+KMRAPGM +M MP+FTWTALC+N+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFVTILKMRAPGMSMMKMPVFTWTALCSNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTNDLGGN MMYVNLIW WGHPEVYIL+LP FGIFSEVV+TF  
Sbjct: 248 VTIALLTLDRYLGTHFFTNDLGGNQMMYVNLIWAWGHPEVYILILPAFGIFSEVVATFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGI TM+ISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVAITILSFIVWLHHFFTMGAGANVNAFFGIATMVISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR++F  PILWT+GF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRVQFTTPILWTLGFLVTFTVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G NYWFPKA G+ L    GK +FWFW+ GF+ AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGYLAGFNYWFPKAMGFTLNEKLGKAAFWFWITGFFGAFLPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        IA  G +LI +GI+  ++QL+VS + R+   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NPEYHSMLLIAVGGAVLILIGIMCQLLQLVVSIKDRNKNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP++ + D++W MK+    + +  K+ +I MPKNT  G++IS+FSLIMGFAL+
Sbjct: 548 PFYNFAEIPVVSERDAFWDMKEKGTAYKRPAKYTEIHMPKNTGAGVIISLFSLIMGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W++W L I+ F+  +   I  +FN   +YY+ ++ +   E + 
Sbjct: 608 WYIWWLAIVGFVGVIATWITYSFNKDVDYYVPADVVKKTEDEH 650


>gi|390991144|ref|ZP_10261416.1| cytochrome o ubiquinol oxidase, subunit I [Xanthomonas axonopodis
           pv. punicae str. LMG 859]
 gi|372554134|emb|CCF68391.1| cytochrome o ubiquinol oxidase, subunit I [Xanthomonas axonopodis
           pv. punicae str. LMG 859]
          Length = 666

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/586 (64%), Positives = 460/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G   G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGGGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPG+ LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGITLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|330819563|ref|YP_004348425.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia gladioli
           BSR3]
 gi|327371558|gb|AEA62913.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia gladioli
           BSR3]
          Length = 669

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/583 (63%), Positives = 453/583 (77%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+   + GYLPP HY+QIFTAHGVIMIFFVA PL+ G++N +V
Sbjct: 68  MLLRGFADAIMMRAQQAIANNDAAGYLPPHHYDQIFTAHGVIMIFFVATPLIIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW    GA LVM+S+F+G+FA+TGW+ YPPLS +  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWFAVVGAGLVMVSMFVGDFAATGWVAYPPLSELGYSPTVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT L+GIN I TI++MRAP  KLM MP+F WTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLTGINFIVTILRMRAPTQKLMQMPVFVWTALITNILIVAVFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DRY+G HFFTN+LGGN MMY+NLIW+WGHPEVYIL+LP FG FSE+++TFS 
Sbjct: 248 GTLALLTADRYLGMHFFTNELGGNAMMYINLIWVWGHPEVYILILPAFGAFSEIIATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATASIGVLSFFVWLHHFFTMGSGANVNAFFGIMTTIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+    LWTIGFMITF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRYHSSTLWTIGFMITFAVGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI++WFPK FG+ L+ FWGK SFW WLIG+++AF PLY+LGF G+TRRM+H+ 
Sbjct: 428 VVFGCLAGISFWFPKVFGFTLDEFWGKVSFWCWLIGYWLAFTPLYVLGFEGMTRRMNHYS 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +A  G + + MGIL+ ++Q+ VS R+RH L D TGDPWNGR+LEWSTSSP 
Sbjct: 488 VPQWHPWLVVALVGAVFVGMGILAMLVQITVSVRRRHELRDETGDPWNGRSLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   +  W  K +   + +  +++DI MP+NT  G++I+ FS + GFA V
Sbjct: 548 PFYNFAIVPTITSVEQHWDDKDSGRAYRQPTQYEDIHMPRNTGAGVIIAAFSAVFGFAFV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WHMW   ++  I  +   I  +++   +YY+ + E+  IE  R
Sbjct: 608 WHMWPFVVLGLIGMVGTFIARSYDTDTDYYVPAAEVERIENAR 650


>gi|334123174|ref|ZP_08497203.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter hormaechei
           ATCC 49162]
 gi|333391048|gb|EGK62171.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter hormaechei
           ATCC 49162]
          Length = 663

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 467/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA GIL  +IQ  VS R R+   D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHPMLMIAAGGAALIACGILCQLIQYYVSIRDRNLNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK+    + + + +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHIHERDAFWEMKEKGEAYKQPEHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQH 650


>gi|325914851|ref|ZP_08177186.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325538942|gb|EGD10603.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 666

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/586 (64%), Positives = 459/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++     G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGNGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W++GF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIVGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAMLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|186472796|ref|YP_001860138.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia phymatum
           STM815]
 gi|184195128|gb|ACC73092.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia phymatum
           STM815]
          Length = 668

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/585 (62%), Positives = 469/585 (80%), Gaps = 6/585 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRTQLALAYHAP-GYLPPHHYDQIFTAHGVIMIFFMAMAFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAVLINISLLVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ++GIGTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT
Sbjct: 187 DYYLWSLQLSGIGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVISTFAR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGA+VNAFFGI TMII++PTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAVPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GFM+TF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRIEFTTPVLWTVGFMVTFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+NYWFPKAFG+KL    GK +FWFW +GF+VAF PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGMNYWFPKAFGFKLNEKLGKAAFWFWQVGFWVAFTPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           + +   W  +A  G +L+A+GI   ++Q++VS R R+     D+TGDPWNGRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAELGAVLVAIGIACQLLQIVVSIRDRNKPENRDLTGDPWNGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP +YNFA +P++H+ D++  MK + N + P   ++DI MP NT+ G  I +FSL +GFA
Sbjct: 547 PPQIYNFATVPVVHELDAFHDMKARGNVEQP--VYRDIHMPSNTSAGFFIGVFSLALGFA 604

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           L WH+W L I +FI  +   I  +F+   +YYI +  +  IE++ 
Sbjct: 605 LTWHIWWLAIAAFIGAIGTWIARSFDNDTDYYIPANTVRLIEERN 649


>gi|126444828|ref|YP_001063707.1| ubiquinol oxidase subunit I [Burkholderia pseudomallei 668]
 gi|126224319|gb|ABN87824.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei 668]
          Length = 668

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/585 (62%), Positives = 462/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H  D + Y K+      K  +++DI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+W L I +    ++ VI  +      YYI ++ +  IE+KR
Sbjct: 607 AVWHIWWLAIAALAGIVVTVIAYSAGENDGYYIPADAVRRIEEKR 651


>gi|448746930|ref|ZP_21728594.1| Cytochrome o ubiquinol oxidase, subunit I [Halomonas titanicae BH1]
 gi|445565440|gb|ELY21550.1| Cytochrome o ubiquinol oxidase, subunit I [Halomonas titanicae BH1]
          Length = 658

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++ G + GYLPPEHY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQLAMAAGDAAGYLPPEHYDQIFTAHGVIMIFFVAMPMVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+ +  AILV ISL +GEFA TGWL Y PLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLFAVSAILVNISLVVGEFAKTGWLAYAPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT L+GIN   TIIKMR  GM +  MPIFTWT+LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQISGIGTTLTGINFFVTIIKMRTKGMTMFRMPIFTWTSLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+G HFFTND GGN+MMYVNLIW WGHPEVYIL+LP FG+FSEV++TF+ 
Sbjct: 248 ATIALLTLDRYLGMHFFTNDFGGNMMMYVNLIWAWGHPEVYILILPAFGVFSEVIATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MV+AT+ ITLLS++VWLHHFFTMG+GANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KRLFGYATMVWATISITLLSFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RG +    P+LWT+GF+ITF +GGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMFRGSLELTSPVLWTLGFIITFTLGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+M+G+ YWFPKAFG+ L   WGK SFW W IGFYVAFMPLY+L F G  RRM  + 
Sbjct: 428 VVFGMMAGLTYWFPKAFGFTLNEKWGKRSFWCWFIGFYVAFMPLYVLAFFGAVRRMQSYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q W  +A  G ++I +GI+  IIQ  VS R R    D+TGDPWNGRTLEWSTSSP 
Sbjct: 488 NPEWQPWMILAWVGAVIIMLGIVCTIIQFWVSIRDRKQNADVTGDPWNGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   DS+W  K ++  +  +  + DI MP+NT  G +IS F+L++GFALV
Sbjct: 548 PFYNFARLPEVGDIDSFWSQKQRSEEQLEEAPYTDIHMPRNTVAGPVISFFALVIGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +  +   I  +   FN   +YY+ + E+  IE++ 
Sbjct: 608 WHIWWLAGVGAVGVFISFMARVFNDDIDYYVPAAEVERIEREH 650


>gi|83720215|ref|YP_442319.1| ubiquinol oxidase subunit I [Burkholderia thailandensis E264]
 gi|257138516|ref|ZP_05586778.1| ubiquinol oxidase, subunit I [Burkholderia thailandensis E264]
 gi|83654040|gb|ABC38103.1| ubiquinol oxidase, subunit I [Burkholderia thailandensis E264]
          Length = 670

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/587 (63%), Positives = 464/587 (79%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVGLFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL+   GK +FWFW IGFYV+F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWFWFIGFYVSFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+G+L  + Q+ V+ RKR+    +D TGDPWNGRTLEW+TSS
Sbjct: 487 NPAWHPWLIVAACGVALIAIGVLHQVAQVWVAVRKRNEPGYLDTTGDPWNGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PPPVYNFA IP +H  D   Y K++       +   +QDI MP NT  G +I + SL++G
Sbjct: 547 PPPVYNFAVIPTVHALDELAYRKEHGLDVGNGRKIVYQDIHMPSNTGAGFVIGMLSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FALVWH+W L I SF   +  VI  +      YYI +E +  IE+KR
Sbjct: 607 FALVWHIWWLAIASFAGIVATVILYSAGDNDGYYIPAETVRKIEEKR 653


>gi|307545744|ref|YP_003898223.1| cytochrome o ubiquinol oxidase subunit I [Halomonas elongata DSM
           2581]
 gi|307217768|emb|CBV43038.1| cytochrome o ubiquinol oxidase, subunit I [Halomonas elongata DSM
           2581]
          Length = 660

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/585 (63%), Positives = 458/585 (78%), Gaps = 3/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPP HY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLIRGFADAIMMRSQLAMASAGAEGFLPPHHYDQIFTAHGVIMIFFVAMPMVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+ + G +LV ISLF+GEFA TGWL Y PLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFMNNLSFWLFAAGVVLVNISLFVGEFAQTGWLAYAPLSGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT L+GIN   TI+KMR  GM L  MPIFTWT+LC NILI+A+FP+LT
Sbjct: 188 DYWIWALQISGIGTTLTGINFFVTILKMRTKGMTLFRMPIFTWTSLCANILIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+G HFFTND GGN+MMYVNLIW WGHPEVYIL+LP FG+FSEV++TF+ 
Sbjct: 248 ATIALLTLDRYLGMHFFTNDFGGNMMMYVNLIWAWGHPEVYILILPAFGVFSEVIATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV+ATV IT LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYGTMVWATVAITFLSFIVWLHHFFTMGAGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF+ITF +GGM GV+LA+PAANF+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFTSPVLWTLGFIITFTLGGMTGVMLALPAANFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++G+ +WFPKAFG+ L   WGK SFW WLIGFYVAFMPLY+L F G  RRM  +E
Sbjct: 428 VVFGMLAGLTFWFPKAFGFTLNEKWGKRSFWCWLIGFYVAFMPLYVLSFFGAVRRMQSYE 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q    IA  G ++I  GI   +IQ +VS R R    D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 NGDWQPLMIIAWVGAVIILCGIACTVIQFLVSIRDRKKNQDVTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P YNFA +P ++  D +W  K +N+ K P  K  +QDI MPKNT  G +I++F+ I GFA
Sbjct: 548 PFYNFAHLPEVNDIDDFWDQKQRNDGKAPLSKPPYQDIHMPKNTWEGPIIALFATIAGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I+  + T    +   F    +YY+ + E+  IE++ 
Sbjct: 608 LVWHIWWLVIVGGVATFATFMARIFREDVDYYVPAAEVERIEREH 652


>gi|410094159|ref|ZP_11290611.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas viridiflava
           UASWS0038]
 gi|409758419|gb|EKN43720.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas viridiflava
           UASWS0038]
          Length = 657

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/585 (62%), Positives = 462/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++     GYLPPEHY+QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAAEGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFMVGLLNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTWTALCT++LI+AAFP+LT
Sbjct: 188 DYYIWSLQISGIGTLLTGLNFFVTILKMRTTGMTLFKMPVFTWTALCTSVLILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LF+ TLDRY+G HFFT++ GGN MMYVNLIW WGHPEVYIL+LP FGIFSE+ +TFSS
Sbjct: 248 ATLFMLTLDRYLGMHFFTSEAGGNPMMYVNLIWAWGHPEVYILILPAFGIFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+VIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYKSLVWATIVITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RFE P+LWTIGF++TF IGGM GV+LAVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYHGRVRFETPMLWTIGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G+ YWFPKAFG++L    G+ SFW W++GFY AFMP Y+LGFMG+TRR++HF+
Sbjct: 428 AVFGYMAGLTYWFPKAFGFRLNDRLGRLSFWCWIVGFYFAFMPSYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I +G+    +QL VS R RH   D TGDPW+ RTLEW+T+SPP
Sbjct: 488 NPEWRPWLMLELIGVAIILVGVAGQALQLFVSIRNRHKTRDTTGDPWDARTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PVYNFA  P +   D++W MK+          ++ I MP+NT  G++IS+F+LI  FALV
Sbjct: 548 PVYNFAEQPKVDDLDAYWGMKERGVSTLSHTDYRAIHMPRNTAAGLIISLFALIASFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L     + +++ ++  + +   +Y+I ++E+  IE+ R++
Sbjct: 608 WHIWWLAAFGLVASVVTMVIRSNDDNIDYFIPAQEVAEIEQARLK 652


>gi|304395493|ref|ZP_07377376.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. aB]
 gi|304356787|gb|EFM21151.1| cytochrome o ubiquinol oxidase, subunit I [Pantoea sp. aB]
          Length = 660

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLIRGFADAIMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTWTALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMSLFKMPVFTWTALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+E+ +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEITATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIAMGIL  +    VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPLLVVAAVGAGLIAMGILCQLTMFYVSVRDRDQNRDVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + +   +++I MPKN+   I+I  F+ +MGFAL+
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYKQPASYEEIHMPKNSGAAIVICAFATVMGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W +  +SF+  ++  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWMAGLSFLGMIVTWIVKSFDEDVDYYVPVAEVQKIENQH 650


>gi|53716520|ref|YP_105022.1| ubiquinol oxidase, subunit I [Burkholderia mallei ATCC 23344]
 gi|121597857|ref|YP_990966.1| ubiquinol oxidase, subunit I [Burkholderia mallei SAVP1]
 gi|124381286|ref|YP_001025367.1| ubiquinol oxidase, subunit I [Burkholderia mallei NCTC 10229]
 gi|126445747|ref|YP_001077431.1| ubiquinol oxidase subunit I [Burkholderia mallei NCTC 10247]
 gi|167000705|ref|ZP_02266514.1| ubiquinol oxidase, subunit I [Burkholderia mallei PRL-20]
 gi|238562411|ref|ZP_00440513.2| cytochrome o ubiquinol oxidase, subunit I [Burkholderia mallei GB8
           horse 4]
 gi|254177269|ref|ZP_04883925.1| ubiquinol oxidase, subunit I [Burkholderia mallei ATCC 10399]
 gi|254202954|ref|ZP_04909316.1| ubiquinol oxidase, subunit I [Burkholderia mallei FMH]
 gi|254208288|ref|ZP_04914637.1| ubiquinol oxidase, subunit I [Burkholderia mallei JHU]
 gi|52422490|gb|AAU46060.1| ubiquinol oxidase, subunit I [Burkholderia mallei ATCC 23344]
 gi|121225655|gb|ABM49186.1| ubiquinol oxidase, subunit I [Burkholderia mallei SAVP1]
 gi|126238601|gb|ABO01713.1| ubiquinol oxidase, subunit I [Burkholderia mallei NCTC 10247]
 gi|147745999|gb|EDK53077.1| ubiquinol oxidase, subunit I [Burkholderia mallei FMH]
 gi|147750975|gb|EDK58043.1| ubiquinol oxidase, subunit I [Burkholderia mallei JHU]
 gi|160698309|gb|EDP88279.1| ubiquinol oxidase, subunit I [Burkholderia mallei ATCC 10399]
 gi|238522720|gb|EEP86163.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia mallei GB8
           horse 4]
 gi|243063390|gb|EES45576.1| ubiquinol oxidase, subunit I [Burkholderia mallei PRL-20]
 gi|261826241|gb|ABN00475.2| ubiquinol oxidase, subunit I [Burkholderia mallei NCTC 10229]
          Length = 668

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/585 (62%), Positives = 461/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R      D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLPENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H  D + Y K+      K  +++DI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 AVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 651


>gi|294649995|ref|ZP_06727383.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292824088|gb|EFF82903.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 660

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 67  MLLRGFADAIMMRLQLFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 127 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLALGEFAATGWMAYPPLSGIEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 187 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+VSTFS 
Sbjct: 247 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVSTFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 307 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRITYTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW IGFY AFMPLYILGFMG+TRR++ ++
Sbjct: 427 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFIGFYFAFMPLYILGFMGMTRRLNTYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI  F++Q+IV + +R   +D TGDPW+GRTLEW+TSSP 
Sbjct: 487 NPEWDPYLAIALFGAVLIAIGIACFLMQIIVGFLQRKDNMDYTGDPWDGRTLEWATSSPA 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +W  K+N   + ++ K++DI MP N   G +I++F  I+GFAL+
Sbjct: 547 PFYNFAHVPAADGIDRFWTDKENGVAYARNTKYEDIHMPTNRAAGFVIAMFITILGFALI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +SF+  +I  I ++F    +YY+ + E+  IE +R  L
Sbjct: 607 WHIWWLVAVSFVAAIISFIVSSFTKNVDYYVPAAEVERIENERYAL 652


>gi|78046864|ref|YP_363039.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78035294|emb|CAJ22939.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 666

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/586 (64%), Positives = 459/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G   G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGGGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SF  W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFLCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|308185901|ref|YP_003930032.1| ubiquinol oxidase subunit I [Pantoea vagans C9-1]
 gi|308056411|gb|ADO08583.1| ubiquinol oxidase subunit I [Pantoea vagans C9-1]
          Length = 660

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/583 (64%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLIRGFADAIMMRTQQVMASAGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTWTALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMSLFKMPVFTWTALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTN++GGN+MMYVNLIW+WGHPEVYILVLPVFG+F+E+ +TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNEMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFAEITATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +    VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPLLVVAAVGAGLIALGILCQLTMFYVSVRDRDQNRDVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + +   +++I MPKN+   I+I  F+ +MGFAL+
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYKQPASYEEIHMPKNSGAAIVICAFATVMGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W +  +SF+  ++  I  +F+   +YY+   E+  IE + 
Sbjct: 608 WHIWWMAGLSFLGMIVTWIVKSFDEDVDYYVPVAEVQKIENQH 650


>gi|33595745|ref|NP_883388.1| ubiquinol oxidase subunit I [Bordetella parapertussis 12822]
 gi|410419033|ref|YP_006899482.1| ubiquinol oxidase subunit I [Bordetella bronchiseptica MO149]
 gi|427813505|ref|ZP_18980569.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica 1289]
 gi|427820708|ref|ZP_18987771.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica D445]
 gi|427824312|ref|ZP_18991374.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica Bbr77]
 gi|33565824|emb|CAE36369.1| ubiquinol oxidase polypeptide I [Bordetella parapertussis]
 gi|408446328|emb|CCJ57996.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica MO149]
 gi|410564505|emb|CCN22052.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica 1289]
 gi|410571708|emb|CCN19948.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica D445]
 gi|410589577|emb|CCN04650.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica Bbr77]
          Length = 660

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/581 (63%), Positives = 462/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 69  MLLRGFADAIMMRTQQAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+M+SLF+GEFA+TGWL YPPLSG+  SPGVGV
Sbjct: 129 PLQIGARDVAYPFLNSLSFWLFMVGVVLLMLSLFVGEFAATGWLAYPPLSGLDYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQ++G+GT LSGIN I TI+KMRAPGM LM MP+FTWTAL TNILIVAAFPVL 
Sbjct: 189 DYYLWALQLSGLGTTLSGINFIVTIMKMRAPGMALMKMPVFTWTALVTNILIVAAFPVLA 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  HFFTNDLGGN+MMYVNLIWIWGHPEVYILVLP FG+FSE+V+T+S 
Sbjct: 249 ATLALLTLDRYLDMHFFTNDLGGNVMMYVNLIWIWGHPEVYILVLPCFGVFSEIVATYSK 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAK+FNWL
Sbjct: 309 KTLFGYKSMVYATASIGVLSFLVWLHHFFTMGAGANVNAFFGIMTMIISIPTGAKVFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F +P+LWTIGFMI FVIGGM GV++A+PA +F+LHNSLFLVAHFHN IIGG
Sbjct: 369 FTMYRGRVEFSLPMLWTIGFMIIFVIGGMTGVLMAIPAVSFVLHNSLFLVAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W +GF++ F P+Y+LGF G+TRR++ ++
Sbjct: 429 VVFGCIAGMVYWFPKAFGFKLNERLGKYSFWCWFVGFFLTFTPMYLLGFKGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 489 NPEWQPYLLVALVGATLIMLGIFFLLQQVFVSIRDRKENMDVTGDPWGGRTLEWSTSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++D+ MP+NT  GI I  F L M F L+
Sbjct: 549 PFYNFAHVPHIDSLDQFWEDKENGRAYQRPAKYEDVHMPRNTAAGIYIGAFGLAMSFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           WHMW L I+ F+  ++  +  +++   +YY+ ++E+  IE 
Sbjct: 609 WHMWWLAIVGFLGMIVSFVVRSYDRDVDYYVPAKEVEEIEN 649


>gi|134278162|ref|ZP_01764876.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 305]
 gi|134249946|gb|EBA50026.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 305]
          Length = 670

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/587 (62%), Positives = 461/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+        K   ++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    ++ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGIVVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|17546578|ref|NP_519980.1| transmembrane cytochrome O ubiquinol oxidase subunit I [Ralstonia
           solanacearum GMI1000]
 gi|17428877|emb|CAD15561.1| probable transmembrane cytochrome o ubiquinol oxidase (subunitI
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 658

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 463/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI++G + GYLPP HY+QIFTAHGVIMIFFVA PLV G++N IV
Sbjct: 68  MLLRGFADAIMMRVQQAIAYGDAAGYLPPHHYDQIFTAHGVIMIFFVATPLVLGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+++ GA+LVM+S+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQIGARDVAFPFVNSLSFWLSAMGAVLVMLSMFVGDFAATGWVAYPPLSELGYSPTPGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT L+GIN I TI++MRAPGM LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLTGINFIVTILRMRAPGMNLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+G HFFTN+LGGN MMYVNLIW+WGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLGMHFFTNELGGNAMMYVNLIWVWGHPEVYVLILPAFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHSSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++ I++WFPK FG+KL  FWGK SFW WL GF++AFMPLY+LGF G+TRRM+H+ 
Sbjct: 428 VLFGCLAAISFWFPKVFGFKLNEFWGKVSFWCWLSGFFLAFMPLYVLGFKGMTRRMNHYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           ++    +  +A  G  +I  GI++ +IQL +S R R T  D+TGDPW+GR+LEWST+SP 
Sbjct: 488 NVDWHPYLVVALVGACVIGAGIVAMLIQLGISIRDRKTHPDLTGDPWDGRSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP I   +  W  K+    + +   ++DI MP+NT+ G ++S F L++ FALV
Sbjct: 548 PFYNFAHIPHITSLEQHWEDKETRRAWRQPAHYEDIHMPRNTSAGFVVSAFGLLLCFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WHMW + +   +  +   I  +++   +YY+S+ E+  IE+ R
Sbjct: 608 WHMWPVAVAGLLGAVATFILRSYDRDVDYYVSAAEVERIERAR 650


>gi|378578420|ref|ZP_09827095.1| cytochrome o ubiquinol oxidase subunit I [Pantoea stewartii subsp.
           stewartii DC283]
 gi|377818700|gb|EHU01781.1| cytochrome o ubiquinol oxidase subunit I [Pantoea stewartii subsp.
           stewartii DC283]
          Length = 660

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ ++     G LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAVMMRTQQVLASSGEAGILPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G ILV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAIGVILVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTW ALCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMDLFKMPVFTWAALCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTLALLTLDRYLDFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+G+ YWFPKAFG+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCMAGVTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA GI+  +I   VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHSLLVVAAVGAGLIACGIICQLIMFYVSVRDRDQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +H+ D++W MK+    + +  K+++I MPKN+   I+I+ F+ I GFA++
Sbjct: 548 PFYNFAVIPHVHERDAFWEMKEKGEAYKQPAKYEEIHMPKNSGAAIVIAAFATIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  ++F+  ++  I  +F+   +YY+   ++  IEK+ 
Sbjct: 608 WHIWWLAGLTFLGMIVSWIVKSFDEDVDYYVPVAKVEKIEKQH 650


>gi|301025682|ref|ZP_07189198.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           196-1]
 gi|299879994|gb|EFI88205.1| cytOchrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           196-1]
          Length = 579

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/563 (65%), Positives = 452/563 (80%), Gaps = 1/563 (0%)

Query: 21  GSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFW 80
           G   G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +VPLQIGARDVAFPFLNNLSFW
Sbjct: 4   GGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFW 63

Query: 81  MTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGIN 140
            T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN
Sbjct: 64  FTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGIN 123

Query: 141 MIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTND 200
              TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND
Sbjct: 124 FFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTND 183

Query: 201 LGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLS 260
           +GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS
Sbjct: 184 MGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLS 243

Query: 261 YIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGF 320
           +IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   +LWTIGF
Sbjct: 244 FIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGF 303

Query: 321 MITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYK 380
           ++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+K
Sbjct: 304 IVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFK 363

Query: 381 LEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAM 440
           L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   D        IAA G +LIA+
Sbjct: 364 LNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIAL 423

Query: 441 GILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYM 500
           GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPPP YNFA +P +H+ D++W M
Sbjct: 424 GILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWEM 483

Query: 501 KKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIY 559
           K+    + K D +++I MPKN+  GI+I+ FS I GFA++WH+W L I+ F   +I  I 
Sbjct: 484 KEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIV 543

Query: 560 NTFNYKRNYYISSEEITCIEKKR 582
            +F+   +YY+   EI  +E + 
Sbjct: 544 KSFDEDVDYYVPVAEIEKLENQH 566


>gi|33593870|ref|NP_881514.1| ubiquinol oxidase subunit I [Bordetella pertussis Tohama I]
 gi|384205175|ref|YP_005590914.1| ubiquinol oxidase subunit I [Bordetella pertussis CS]
 gi|33563943|emb|CAE43204.1| ubiquinol oxidase polypeptide I [Bordetella pertussis Tohama I]
 gi|332383289|gb|AEE68136.1| ubiquinol oxidase polypeptide I [Bordetella pertussis CS]
          Length = 659

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/581 (63%), Positives = 462/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQQAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+M+SLF+GEFA+TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFMVGVVLLMLSLFVGEFAATGWLAYPPLSGLDYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQ++G+GT LSGIN I TI+KMRAPGM LM MP+FTWTAL TNILIVAAFPVL 
Sbjct: 188 DYYLWALQLSGLGTTLSGINFIVTIMKMRAPGMALMKMPVFTWTALVTNILIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  HFFTNDLGGN+MMYVNLIWIWGHPEVYILVLP FG+FSE+V+T+S 
Sbjct: 248 ATLALLTLDRYLDMHFFTNDLGGNVMMYVNLIWIWGHPEVYILVLPCFGVFSEIVATYSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAK+FNWL
Sbjct: 308 KTLFGYKSMVYATASIGVLSFLVWLHHFFTMGAGANVNAFFGIMTMIISIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F +P+LWTIGFMI FVIGGM GV++A+PA +F+LHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYRGRVEFSLPMLWTIGFMIIFVIGGMTGVLMAIPAVSFVLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W +GF++ F P+Y+LGF G+TRR++ ++
Sbjct: 428 VVFGCIAGMVYWFPKAFGFKLNERLGKYSFWCWFVGFFLTFTPMYLLGFKGMTRRLNTYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPEWQPYLLVALVGATLIMLGIFFLLQQVFVSIRDRKENMDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++D+ MP+NT  GI I  F L M F L+
Sbjct: 548 PFYNFAHVPHIDSLDQFWEDKENGRAYQRPAKYEDVHMPRNTAAGIYIGAFGLAMSFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           WHMW L I+ F+  ++  +  +++   +YY+ ++E+  IE 
Sbjct: 608 WHMWWLAIVGFLGMIVSFVVRSYDRDVDYYVPAKEVEEIEN 648


>gi|312171565|emb|CBX79823.1| cytochrome-c oxidase [Erwinia amylovora ATCC BAA-2158]
          Length = 663

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAILMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G +LV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVVLVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+A+FPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTIMKMRAPGMTMFKMPVFTWASLCTNVLIIASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATVVIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVVITILSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWFPKAFGFTLNETWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA G+   +IQ  VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGVACQVIQFYVSVRDREQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   + +I MPKN+  G++I+ FSLI GFA +
Sbjct: 548 PFYNFAIVPEVHERDAFWEMKEKGEAYKRPAHYAEIHMPKNSGAGVVIAFFSLIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY++  EI  IE + 
Sbjct: 608 WHIWWLVGLSFLGMIVSWIVKSFDEDVDYYVTVAEIEKIENQH 650


>gi|299067543|emb|CBJ38743.1| cytochrome o ubiquinol oxidase, subunit I [Ralstonia solanacearum
           CMR15]
          Length = 658

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+QQAI++G + GYLPP HY+QIFTAHGVIMIFFVA PLV G++N IV
Sbjct: 68  MLLRGFADAIMMRVQQAIAYGDAAGYLPPHHYDQIFTAHGVIMIFFVATPLVLGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+++ GA+LVM+S+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQIGARDVAFPFVNSLSFWLSAMGAVLVMLSMFVGDFAATGWVAYPPLSELGYSPTPGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT L+GIN I TI++MRAPGM LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLTGINFIVTILRMRAPGMDLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+G HFFTN+LGGN MMYVNLIW+WGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLGMHFFTNELGGNAMMYVNLIWVWGHPEVYVLILPAFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHSSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++ I++WFPK FG+KL  FWGK SFW WL GF++AFMPLY+LGF G+TRRM+H+ 
Sbjct: 428 VLFGCLAAISFWFPKVFGFKLNEFWGKVSFWCWLSGFFLAFMPLYVLGFKGMTRRMNHYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           ++    +  +A  G  +I  GI++ +IQL VS R R    D+TGDPW+GR+LEWST+SP 
Sbjct: 488 NVDWHPYLVVALVGACVIGAGIVALLIQLGVSIRDRKQHPDLTGDPWDGRSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP I   +  W  K+    + +   ++DI MP+NT+ G ++S F L++ FALV
Sbjct: 548 PFYNFAHIPHITSLEQHWEDKETRRAWRQPAHYEDIHMPRNTSAGFVVSAFGLLLCFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WHMW + +   +  +   I  +++   +YY+S+ E+  IE+ R
Sbjct: 608 WHMWPVAVAGLLGAVATFILRSYDRDVDYYVSAAEVERIERAR 650


>gi|237508762|ref|ZP_04521477.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei MSHR346]
 gi|254184766|ref|ZP_04891355.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1655]
 gi|184215358|gb|EDU12339.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1655]
 gi|235000967|gb|EEP50391.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei MSHR346]
          Length = 668

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/585 (62%), Positives = 462/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRRPENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H  D + Y K+      K  +++DI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+W L I +    ++ VI  +      YYI ++ +  IE+KR
Sbjct: 607 AVWHIWWLAIAALAGIVVTVIAYSAGENDGYYIPADAVRRIEEKR 651


>gi|188534641|ref|YP_001908438.1| Cytochrome o ubiquinol oxidase subunit I [Erwinia tasmaniensis
           Et1/99]
 gi|188029683|emb|CAO97562.1| Cytochrome o ubiquinol oxidase subunit I [Erwinia tasmaniensis
           Et1/99]
          Length = 663

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAVMMR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MMLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G +LV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVVLVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTIMKMRAPGMTMFKMPVFTWASLCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATVVIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVVITILSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWFPKAFGFTLNETWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA G+   +IQ  VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHPMLVIAACGAALIACGVACQLIQFYVSVRDREQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   + +I MPKN+  G++I  FSLI GFA +
Sbjct: 548 PFYNFAIVPEVHERDAFWEMKEKGEAYKRPAHYAEIHMPKNSGAGVVIGFFSLIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   EI  IE + 
Sbjct: 608 WHIWWLVGLSFLGMIVSWIVKSFDEDVDYYVPVAEIEKIENQH 650


>gi|300957996|ref|ZP_07170161.1| cytochrome o ubiquinol oxidase, subunit I, partial [Escherichia
           coli MS 175-1]
 gi|300315332|gb|EFJ65116.1| cytochrome o ubiquinol oxidase, subunit I [Escherichia coli MS
           175-1]
          Length = 576

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/563 (65%), Positives = 452/563 (80%), Gaps = 1/563 (0%)

Query: 21  GSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFW 80
           G   G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +VPLQIGARDVAFPFLNNLSFW
Sbjct: 1   GGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFW 60

Query: 81  MTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGIN 140
            T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN
Sbjct: 61  FTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGIN 120

Query: 141 MIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTND 200
              TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND
Sbjct: 121 FFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTND 180

Query: 201 LGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLS 260
           +GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS
Sbjct: 181 MGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLS 240

Query: 261 YIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGF 320
           +IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   +LWTIGF
Sbjct: 241 FIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGF 300

Query: 321 MITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYK 380
           ++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+K
Sbjct: 301 IVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFK 360

Query: 381 LEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAM 440
           L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   D        IAA G +LIA+
Sbjct: 361 LNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIAL 420

Query: 441 GILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYM 500
           GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPPP YNFA +P +H+ D++W M
Sbjct: 421 GILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWEM 480

Query: 501 KKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIY 559
           K+    + K D +++I MPKN+  GI+I+ FS I GFA++WH+W L I+ F   +I  I 
Sbjct: 481 KEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIV 540

Query: 560 NTFNYKRNYYISSEEITCIEKKR 582
            +F+   +YY+   EI  +E + 
Sbjct: 541 KSFDEDVDYYVPVAEIEKLENQH 563


>gi|259909261|ref|YP_002649617.1| ubiquinol oxidase subunit 1 [Erwinia pyrifoliae Ep1/96]
 gi|387872219|ref|YP_005803600.1| cytochrome-c oxidase [Erwinia pyrifoliae DSM 12163]
 gi|224964883|emb|CAX56405.1| Ubiquinol oxidase subunit 1 [Erwinia pyrifoliae Ep1/96]
 gi|283479313|emb|CAY75229.1| cytochrome-c oxidase [Erwinia pyrifoliae DSM 12163]
          Length = 663

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAV+MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MMLRGFADAVLMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G +LV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVVLVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTIMKMRAPGMTMFKMPVFTWASLCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATVVIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVVITILSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWFPKAFGFTLNETWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA G+   +IQ  VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHPMLVIAACGAALIACGVACQLIQFYVSVRDREQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   + +I MPKN+  G++I  FSLI GFA +
Sbjct: 548 PFYNFAVVPAVHERDAFWEMKEKGEAYKRPAHYAEIHMPKNSGAGVVIGFFSLIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   EI  IE + 
Sbjct: 608 WHIWWLVGLSFLGMIVSWIVKSFDEDVDYYVPVAEIEKIENQH 650


>gi|410474093|ref|YP_006897374.1| ubiquinol oxidase subunit I [Bordetella parapertussis Bpp5]
 gi|408444203|emb|CCJ50917.1| ubiquinol oxidase polypeptide I [Bordetella parapertussis Bpp5]
          Length = 660

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/581 (63%), Positives = 462/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 69  MLLRGFADAIMMRTQQAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+M+SLF+GEFA+TGWL YPPLSG+  SPGVGV
Sbjct: 129 PLQIGARDVAYPFLNSLSFWLFMVGVVLLMLSLFVGEFAATGWLAYPPLSGLDYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQ++G+GT LSGIN I TI+KMRAPGM LM MP+FTWTAL TNILIVAAFPVL 
Sbjct: 189 DYYLWALQLSGLGTTLSGINFIVTIMKMRAPGMALMKMPVFTWTALVTNILIVAAFPVLA 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  HFFTNDLGGN+MMYVNLIWIWGHPEVYILVLP FG+FSE+V+T+S 
Sbjct: 249 ATLALLTLDRYLDMHFFTNDLGGNVMMYVNLIWIWGHPEVYILVLPCFGVFSEIVATYSK 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAK+FNWL
Sbjct: 309 KTLFGYKSMVYATASIGVLSFLVWLHHFFTMGAGANVNAFFGIMTMIISIPTGAKVFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F +P+LWTIGFMI FVIGGM GV++A+PA +F+LHNSLFLVAHFHN IIGG
Sbjct: 369 FTMYRGRVEFSLPMLWTIGFMIIFVIGGMTGVLMAIPAVSFVLHNSLFLVAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W +GF++ F P+Y+LGF G+TRR++ ++
Sbjct: 429 VVFGCIAGMVYWFPKAFGFKLNERLGKYSFWCWFVGFFLTFTPMYLLGFKGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 489 NPEWQPYLLVALVGATLIMLGIFFLLQQVFVSIRDRKENMDVTGDPWGGRTLEWSTSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++D+ MP+NT  GI I  F L M F L+
Sbjct: 549 PFYNFAHVPHIDSLDQFWEDKENGRAYQRPAKYEDVHMPRNTVAGIYIGAFGLAMSFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           WHMW L I+ F+  ++  +  +++   +YY+ ++E+  IE 
Sbjct: 609 WHMWWLAIVGFLGMIVSFVVRSYDRDVDYYVPAKEVEEIEN 649


>gi|339325790|ref|YP_004685483.1| ubiquinol oxidase subunit 1 [Cupriavidus necator N-1]
 gi|338165947|gb|AEI77002.1| ubiquinol oxidase subunit 1 [Cupriavidus necator N-1]
          Length = 658

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI++G + GYLPP HY+QIFTAHGVIMIFFVA PLV G++N IV
Sbjct: 68  MLLRGFADAIMMRAQQAIAYGDAAGYLPPHHYDQIFTAHGVIMIFFVATPLVLGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWM++ GA+LVM+S+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQIGARDVAFPFVNSLSFWMSAMGAVLVMMSMFVGDFAATGWVAYPPLSELGYSPTPGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT L+GIN I TI++MRAPG+ LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLTGINFIVTILRMRAPGLNLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+G HFFTN+LGGN MMYVNLIWIWGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLGMHFFTNELGGNAMMYVNLIWIWGHPEVYVLILPAFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    +WTIGFM+TF +GGM GV+LA+P A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHTSTMWTIGFMVTFAVGGMTGVLLAIPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++ I +WFPK FG+KL  FWGK SFW WL GF++AFMPLY+LGF G+TRRM+H+ 
Sbjct: 428 VLFGCLAAITFWFPKVFGFKLNEFWGKVSFWCWLTGFFLAFMPLYVLGFKGMTRRMNHYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           ++    +  +A  G  +I  GIL+ I+Q  VS R R    D+TGDPW+GR+LEWST+SP 
Sbjct: 488 NVDWHPYLVVALVGAFVIGAGILAMIVQFAVSIRDRKQNQDLTGDPWDGRSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   +  W  K+    + +  +++DI MP+NT+ G ++S F L+  FALV
Sbjct: 548 PFYNFAHVPHITSLEQHWDDKEAGRAWRQPARYEDIHMPRNTSAGFIVSAFGLLCCFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WHMWL+  +  +  +   I  +++   +YY+ + E+  IE+ R
Sbjct: 608 WHMWLVAAVGLVGAIATFIVRSYDRDVDYYVPAAEVERIERAR 650


>gi|209518751|ref|ZP_03267566.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. H160]
 gi|209500793|gb|EEA00834.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. H160]
          Length = 673

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/584 (63%), Positives = 466/584 (79%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+S+ S  G+LPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRMQLALSYLSP-GFLPPHHYDQIFTAHGVIMIFFMAMTFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEF  TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFGQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ++GIGTLL+G+N   TI+KMRAPGM  M MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWSLQLSGIGTLLTGVNFFVTIVKMRAPGMSFMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+TF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MV+AT  I +LS++VWLHHFFTMGSGA+VNAFFGI TM+ISIPTG K+FNWL
Sbjct: 307 KPLFGYKTMVWATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMVISIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR++F  PILWTIGF+ITF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYKGRLQFTTPILWTIGFIITFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW IGF+VAF PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKIGKAAFWFWQIGFWVAFTPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D+TGDPW+G TLEW+TSS
Sbjct: 487 NPAWHPWLIVAAFGAVLIAIGIACQLLQLVVSIRDRNLPENRDLTGDPWDGHTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA IP +   D++  MK          ++DI MP NT+ G+L+ +FSL++GFA 
Sbjct: 547 PPPAYNFAHIPDVRALDAFTEMKSRKGGVKVPVYRDIHMPSNTSAGLLVGLFSLVLGFAG 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           VWH+W L I+ F+  +  VI  +F     YYI ++ +  IE+KR
Sbjct: 607 VWHIWWLAIVGFVGAIGTVIVYSFMDNDGYYIPADTVALIEEKR 650


>gi|359393621|ref|ZP_09186674.1| Ubiquinol oxidase subunit 1 [Halomonas boliviensis LC1]
 gi|357970868|gb|EHJ93313.1| Ubiquinol oxidase subunit 1 [Halomonas boliviensis LC1]
          Length = 670

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/583 (63%), Positives = 458/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++ G + GYLPPEHY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQLAMAAGDAAGYLPPEHYDQIFTAHGVIMIFFVAMPMVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW+ +  AILV ISL +GEFA TGWL Y PLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNNLSFWLFAVAAILVNISLVVGEFAKTGWLAYAPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT L+GIN   TIIKMR  GM +  MPIFTWT+LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQISGIGTTLTGINFFVTIIKMRTKGMTMFRMPIFTWTSLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY G HFFTND GGN+MMYVNLIW WGHPEVYIL+LP FG+FSEV+STF+ 
Sbjct: 248 ATVALLTLDRYFGMHFFTNDFGGNMMMYVNLIWAWGHPEVYILILPAFGVFSEVISTFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MV+AT+ ITLLS++VWLHHFFTMG+GANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KRLFGYATMVWATIAITLLSFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RG +    P+LWT+GF+ITF +GGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMFRGSLELTSPVLWTLGFIITFTLGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+M+G+ +WFPKAFG+ L   WGK SFW W IGFYVAFMPLY+L F G  RRM  + 
Sbjct: 428 VVFGMMAGLTFWFPKAFGFTLSEKWGKRSFWCWFIGFYVAFMPLYVLSFFGAVRRMQSYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q W  +A  G ++I +GI   IIQ  VS R R   +D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 NPEWQPWMILAWVGAVIIMLGIACTIIQFWVSIRDRKQNVDVTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   DS+W  K ++  +  +  + DI MP+NT  G +IS F+L++GFALV
Sbjct: 548 PFYNFARLPEVGDIDSFWSQKQRSEEQLEEAPYTDIHMPRNTVAGPVISFFALVIGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +  +   +  +   FN   +YY+ + E+  IE++ 
Sbjct: 608 WHIWWLAGVGAVGVFVSFMARVFNDDIDYYVPAAEVERIEREH 650


>gi|126458460|ref|YP_001076601.1| ubiquinol oxidase subunit I [Burkholderia pseudomallei 1106a]
 gi|242313920|ref|ZP_04812937.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106b]
 gi|126232228|gb|ABN95641.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106a]
 gi|242137159|gb|EES23562.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106b]
          Length = 670

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/587 (62%), Positives = 460/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +M YA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMAYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+        K   ++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|292487461|ref|YP_003530333.1| cytochrome-c oxidase [Erwinia amylovora CFBP1430]
 gi|292898703|ref|YP_003538072.1| cytochrome O ubiquinol oxidase subunit I [Erwinia amylovora ATCC
           49946]
 gi|428784396|ref|ZP_19001887.1| cytochrome-c oxidase [Erwinia amylovora ACW56400]
 gi|291198551|emb|CBJ45659.1| cytochrome O ubiquinol oxidase subunit I [Erwinia amylovora ATCC
           49946]
 gi|291552880|emb|CBA19925.1| cytochrome-c oxidase [Erwinia amylovora CFBP1430]
 gi|426275958|gb|EKV53685.1| cytochrome-c oxidase [Erwinia amylovora ACW56400]
          Length = 663

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MLLRGFADAILMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G +LV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVVLVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+A+FPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTIMKMRAPGMTMFKMPVFTWASLCTNVLIIASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATVVIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVVITILSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWFPKAFGFTLNETWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA G+   +IQ  VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHPMLVVAACGAALIACGVACQVIQFYVSVRDREQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   + +I MPKN+  G++I+ FSLI GFA +
Sbjct: 548 PFYNFAIVPEVHERDAFWEMKEKGEAYKRPAHYAEIHMPKNSGAGVVIAFFSLIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   EI  IE + 
Sbjct: 608 WHIWWLVGLSFLGMIVSWIVKSFDEDVDYYVPVAEIEKIENQH 650


>gi|53722917|ref|YP_111902.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei K96243]
 gi|418397177|ref|ZP_12970913.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 354a]
 gi|418556758|ref|ZP_13121379.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 354e]
 gi|52213331|emb|CAH39374.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei K96243]
 gi|385366586|gb|EIF72197.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 354e]
 gi|385369301|gb|EIF74643.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 354a]
          Length = 670

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/587 (62%), Positives = 460/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +M YA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMAYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+        K   ++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|33600270|ref|NP_887830.1| ubiquinol oxidase subunit I [Bordetella bronchiseptica RB50]
 gi|412339482|ref|YP_006968237.1| ubiquinol oxidase subunit I [Bordetella bronchiseptica 253]
 gi|33567868|emb|CAE31782.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica RB50]
 gi|408769316|emb|CCJ54092.1| ubiquinol oxidase polypeptide I [Bordetella bronchiseptica 253]
          Length = 660

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/581 (63%), Positives = 462/581 (79%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 69  MLLRGFADAIMMRTQQAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+M+SLF+GEFA+TGWL YPPLSG+  SPGVGV
Sbjct: 129 PLQIGARDVAYPFLNSLSFWLFMVGVVLLMLSLFVGEFAATGWLAYPPLSGLDYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQ++G+GT LSGIN I TI+KMRAPGM LM MP+FTWTAL TNILIVAAFPVL 
Sbjct: 189 DYYLWALQLSGLGTTLSGINFIVTIMKMRAPGMALMKMPVFTWTALVTNILIVAAFPVLA 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  HFFTNDLGGN+MMYVNLIWIWGHPEVYILVLP FG+FSE+V+T+S 
Sbjct: 249 ATLALLTLDRYLDMHFFTNDLGGNVMMYVNLIWIWGHPEVYILVLPCFGVFSEIVATYSK 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAK+FNWL
Sbjct: 309 KTLFGYKSMVYATASIGVLSFLVWLHHFFTMGAGANVNAFFGIMTMIISIPTGAKVFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F +P+LWTIGFMI FVIGGM GV++A+PA +F+LHNSLFLVAHFHN IIGG
Sbjct: 369 FTMYRGRVEFSLPMLWTIGFMIIFVIGGMTGVLMAIPAVSFVLHNSLFLVAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    G+ SFW W +GF++ F P+Y+LGF G+TRR++ ++
Sbjct: 429 VVFGCIAGMVYWFPKAFGFKLNERLGRYSFWCWFVGFFLTFTPMYLLGFKGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 489 NPEWQPYLLVALVGATLIMLGIFFLLQQVFVSIRDRKENMDVTGDPWGGRTLEWSTSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++D+ MP+NT  GI I  F L M F L+
Sbjct: 549 PFYNFAHVPHIDSLDQFWEDKENGRAYQRPAKYEDVHMPRNTAAGIYIGAFGLAMSFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           WHMW L I+ F+  ++  +  +++   +YY+ ++E+  IE 
Sbjct: 609 WHMWWLAIVGFLGMIVSFVVRSYDRDVDYYVPAKEVEEIEN 649


>gi|385787564|ref|YP_005818673.1| ubiquinol oxidase subunit I [Erwinia sp. Ejp617]
 gi|310766836|gb|ADP11786.1| Ubiquinol oxidase subunit 1 [Erwinia sp. Ejp617]
          Length = 663

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/583 (64%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAV+MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N  V
Sbjct: 68  MMLRGFADAVLMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ G +LV +SL +GEFA TGWL YPPLSG   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTAVGVVLVNLSLGVGEFAQTGWLAYPPLSGAEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+AAFPVLT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTIMKMRAPGMTMFKMPVFTWASLCTNVLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+G HFFTND+GGN+MMYVNLIW+WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLALLTLDRYLGFHFFTNDMGGNMMMYVNLIWVWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATVVIT+LS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVVITILSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWT+GF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIQMHSAMLWTVGFLVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGVTYWFPKAFGFTLNETWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IAA G  LIA G+   +IQ  VS R R    D+TGDPW  RTLEW+TSSPP
Sbjct: 488 DPQFHPMLVIAACGAALIACGVACQLIQFYVSVRDREQNRDLTGDPWGARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   + +I MPKN+  G++I  FSLI GFA +
Sbjct: 548 PFYNFAVVPEVHERDAFWEMKEKGEAYKRPAHYAEIHMPKNSGAGVVIGFFSLIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +SF+  ++  I  +F+   +YY+   EI  IE + 
Sbjct: 608 WHIWWLVGLSFLGMIVSWIVKSFDEDVDYYVPVAEIEKIENQH 650


>gi|386865712|ref|YP_006278660.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1026b]
 gi|385662840|gb|AFI70262.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1026b]
          Length = 670

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/587 (62%), Positives = 460/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N    I++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVMILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+        K   ++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|403523812|ref|YP_006659381.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei BPC006]
 gi|403078879|gb|AFR20458.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei BPC006]
          Length = 670

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/587 (62%), Positives = 461/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRRPENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+           +++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|417950043|ref|ZP_12593172.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio splendidus ATCC
           33789]
 gi|342807473|gb|EGU42662.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio splendidus ATCC
           33789]
          Length = 685

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 463/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TF+ 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATV IT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVAITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P+LWT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMLWTVGFLITFTVGGMTGVLMAVPGADFILHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ L   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAIGYWFPKATGFTLNEVWGKRAFYCWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT +IAMG++   +Q  VS R R    D+TGDPW+GRT EW+TSS
Sbjct: 486 DINPEFFPLLAVAAAGTGVIAMGVVCQFVQFFVSVRDRDQNRDLTGDPWDGRTFEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P   + D++WY K++    P  +++++ I MPKNT  GI +S +SL+ GF
Sbjct: 546 PPPFYNFAKLPKGDELDAFWYQKQSGEFDPTQEEEYERIHMPKNTPTGIYVSAWSLVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|238897315|ref|YP_002922992.1| cytochrome o ubiquinol oxidase, subunit I-1 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465070|gb|ACQ66844.1| cytochrome o ubiquinol oxidase, subunit I-1 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 663

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQA+S     G+LP  HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLLRGFADAILMRSQQALSSAGEAGFLPAHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN+LSFW+   G +L+ +SL IGEFA TGWL YPPLSG   SP VGV
Sbjct: 128 PLQIGARDMAFPFLNSLSFWLFVAGVVLINLSLGIGEFAQTGWLAYPPLSGKEYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+GIN+  TI+KMRAPGM +M MP+FTWT+ C+NILI+ AFP+LT
Sbjct: 188 DYWIWSLQISGMGTLLTGINLFTTILKMRAPGMSMMKMPVFTWTSFCSNILIIIAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTN+LGGN+MMY+NL+W WGHPEVYILVLPVFGIFSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNELGGNMMMYINLVWAWGHPEVYILVLPVFGIFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT L++IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITFLAFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWT+GF++TF +GGM GV+LAVPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIHFNSAMLWTLGFIVTFSVGGMTGVLLAVPAANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFWLIGF+VAFMPLY+LG MG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKAFGFTLNEKWGIRAFWFWLIGFFVAFMPLYVLGLMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G +LIA GIL  +IQ++VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 NPQFHPLLMVAAGGAVLIAFGILCQLIQIVVSIRDREKNRDLTGDPWGGRTLEWATSSPS 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P I   D+++ MK+    +P+ +K+ +I M KN+  GI+I+ FS+I GFA++
Sbjct: 548 AFYNFAVVPEIKSRDAFFDMKEKGEAYPRPEKYAEIHMSKNSATGIIIAAFSVIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+  I      I  +F+   +YY+   +I  IE + 
Sbjct: 608 WHIWWLAIVGVIGMGATWIAKSFDQDVDYYVPVSDIERIENEH 650


>gi|384420358|ref|YP_005629718.1| cytochrome o ubiquinol oxidase subunit I [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|353463271|gb|AEQ97550.1| cytochrome o ubiquinol oxidase, subunit I [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 666

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 455/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA+      G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALVGNGGEGVFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFFVTILRMRAPGMTLMRMPVFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTN  GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNGGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTAPVLWTIGFIITFSIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLLQIAYSVWKRKDHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS++MGF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTAAGVYIGAFSVLMGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II     +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLAGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|217422086|ref|ZP_03453589.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei 576]
 gi|217394317|gb|EEC34336.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei 576]
          Length = 670

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/587 (62%), Positives = 460/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS R R      D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLPENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+           +++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|58581253|ref|YP_200269.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas oryzae pv.
           oryzae KACC 10331]
 gi|58425847|gb|AAW74884.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas oryzae pv.
           oryzae KACC 10331]
          Length = 673

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 456/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA+      G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 75  MLLRGFADAAMMRTQQALVGNGGEGVFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 134

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 135 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 194

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTAL TNILI+AAFP+LT
Sbjct: 195 DYYIWALQISGLGTLLTGVNFFVTILRMRAPGMTLMRMPVFTWTALITNILIIAAFPILT 254

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTN  GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 255 VALALLGADRYLGTHFFTNGGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 314

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 315 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 374

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 375 FTMFRGRVHVTAPVLWTIGFIITFSIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 434

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 435 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 494

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 495 HPEWAPWLYVAAVGAAIIGMGIFLNLLQIAYSVWKRKDHMDYTGDPWDGRTLEWATSSPP 554

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS++MGF L+
Sbjct: 555 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTAAGVYIGAFSVLMGFGLI 614

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 615 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 660


>gi|91778471|ref|YP_553679.1| cytochrome-c oxidase [Burkholderia xenovorans LB400]
 gi|385204678|ref|ZP_10031548.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. Ch1-1]
 gi|91691131|gb|ABE34329.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           xenovorans LB400]
 gi|385184569|gb|EIF33843.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. Ch1-1]
          Length = 662

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/584 (63%), Positives = 463/584 (79%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMRLQ A+++ +  GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFSDAIMMRLQLALAYINP-GYLPPHHYDQVFTAHGVIMIFFMAMTFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ++GIGTLL+G+N   TI+KMRAPGM  M MP+FTWT LCTN+LI+A+FP+LT
Sbjct: 187 DYYLWSLQLSGIGTLLTGVNFFVTIVKMRAPGMTFMKMPVFTWTTLCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+TF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MV+AT  I +LS++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVWATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+ F  PILWTIGFMITF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYKGRLEFTTPILWTIGFMITFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW IGFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNEKLGKAAFWFWQIGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G +LIA+GI   + QL VS R R+     D+TGDPWN  TLEW+TSS
Sbjct: 487 NPAWHPWLVFAAVGAVLIAIGIACQLAQLYVSIRDRNLPQNRDLTGDPWNANTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPPVYNFA IP + + D++  MK    K  +  ++DI MP NT+ G+L+ +FSL++GFA 
Sbjct: 547 PPPVYNFAIIPTVRKLDAFGDMKSRKDKPAQPVYRDIHMPSNTSAGLLVGLFSLVLGFAG 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           VWH+W L I+  +  +  VI  +F     YYI ++ +  IE+K 
Sbjct: 607 VWHIWWLAIVGLVGAIGTVIVYSFMKNEGYYIPADTVALIEEKH 650


>gi|84623173|ref|YP_450545.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|188575777|ref|YP_001912706.1| cytOchrome o ubiquinol oxidase, subunit I [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|84367113|dbj|BAE68271.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|188520229|gb|ACD58174.1| cytOchrome o ubiquinol oxidase, subunit I [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 666

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 456/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA+      G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALVGNGGEGVFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQISGLGTLLTGVNFFVTILRMRAPGMTLMRMPVFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTN  GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNGGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHVTAPVLWTIGFIITFSIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLLQIAYSVWKRKDHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS++MGF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTAAGVYIGAFSVLMGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|375263277|ref|YP_005025507.1| cytochrome O ubiquinol oxidase subunit I [Vibrio sp. EJY3]
 gi|369843704|gb|AEX24532.1| cytochrome O ubiquinol oxidase subunit I [Vibrio sp. EJY3]
          Length = 678

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/584 (63%), Positives = 462/584 (79%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPPEHY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSSAGEAGYLPPEHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFIVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P+LWT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMLWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNEAWGKRAFYLWIIGFLMAFLPLYALGFMGMTRRISQEI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT++IA+G+LS  IQ+ VS R R    D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPEFFPLLAVAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     DS+WY K++  F   K+ +++ I MPKNT  GI +S +SL+ GF +
Sbjct: 548 PFYNFAHLPKGDVLDSFWYEKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWSLLFGFGM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L  +S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 608 IWYIWWLAGLSLVAIVVTCIKHSYNEDVDYYVEVEEIKAIEAAR 651


>gi|333898753|ref|YP_004472626.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fulva 12-X]
 gi|333114018|gb|AEF20532.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fulva 12-X]
          Length = 651

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/581 (63%), Positives = 453/581 (77%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + GYLPP HY+QIFTAHGVIMIFFVA PLV G++N + 
Sbjct: 68  MLLRGFADAIMMRTQLAVATGGAEGYLPPHHYDQIFTAHGVIMIFFVATPLVVGLMNIVT 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+  GG +L  ISLF+GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPLLNSLSFWLFVGGVLLTNISLFVGEFAMTGWVAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++G+GTLL+G+N + TI+KMRAPGM L  MPIFTWT LCT+++I AAFP+LT
Sbjct: 188 DYFIWSLQLSGLGTLLTGVNFLVTILKMRAPGMGLFQMPIFTWTILCTSVIICAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY+  H FTN  GG+ MMYVNL+W WGHPEVY+L+LP FG+FSEV +TF+ 
Sbjct: 248 VALAMLTLDRYLDFHLFTNTAGGSPMMYVNLVWAWGHPEVYLLILPAFGVFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+ATV ITLLS++VWLHHFFTMGSGA+VNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYHSMVWATVAITLLSFVVWLHHFFTMGSGASVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+LWT+GF+ITF IGGM GV+LAVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRLEFTTPVLWTLGFIITFSIGGMTGVLLAVPGADFLLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+GI YWFPK FG++L   WGK SFW W++GFY+AFMPLYILGFMG+TRR++   
Sbjct: 428 AVFGYMAGITYWFPKVFGFRLHEGWGKASFWLWIVGFYLAFMPLYILGFMGMTRRLNTTT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI +GIL  +IQ+ VS  KR  L D TGDPWN RTLEWSTSSPP
Sbjct: 488 NPEWEPYLYVAVVGAVLIGLGILCTLIQIAVSIIKRKELADHTGDPWNARTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA  P   + D +   K++  +    KF+ I MP+NT IG++ S F  +M FAL+W
Sbjct: 548 PFYNFAVTPRGDRVDEFHEQKRDGRQPAPSKFRPIHMPRNTGIGLIASAFMTLMCFALIW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           H+W L  ++FI+++   I  +++   +YY+  EEI  IE  
Sbjct: 608 HIWWLVGVTFIVSIACFIVRSYDEDTDYYVQPEEIARIEAA 648


>gi|289662730|ref|ZP_06484311.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. vasculorum NCPPB 702]
 gi|289670393|ref|ZP_06491468.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. musacearum NCPPB 4381]
          Length = 666

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 456/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA+      G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALVGNGGEGVFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MR PGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRTPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTAPVLWTIGFIITFSIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAVGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|283784257|ref|YP_003364122.1| cytochrome o ubiquinol oxidase subunit 1 [Citrobacter rodentium
           ICC168]
 gi|282947711|emb|CBG87266.1| cytochrome o ubiquinol oxidase subunit 1 [Citrobacter rodentium
           ICC168]
          Length = 663

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+Q+FTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQVFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATICITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPQFHPMLMVAAAGAALIALGILCLVIQIYVSIRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYKQPAQYEEIHMPKNSGAGIVIAAFATLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVHEVEKLENQH 650


>gi|148978618|ref|ZP_01815045.1| cytochrome o ubiquinol oxidase, subunit I [Vibrionales bacterium
           SWAT-3]
 gi|145962284|gb|EDK27566.1| cytochrome o ubiquinol oxidase, subunit I [Vibrionales bacterium
           SWAT-3]
          Length = 685

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/586 (62%), Positives = 462/586 (78%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TF+ 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATV IT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVAITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P+LWT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMLWTVGFLITFTVGGMTGVLMAVPGADFILHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ L   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAIGYWFPKATGFTLNEVWGKRAFYCWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT +IAMG++   +Q  VS R R    D+TGDPW GRT EW+TSS
Sbjct: 486 DINPEFFPLLAVAAAGTGVIAMGVVCQFVQFFVSVRDRDQNRDLTGDPWGGRTFEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P   + D++WY K++    P  +++++ I MPKNT  GI +S +SL+ GF
Sbjct: 546 PPPFYNFAKLPKGDELDAFWYQKQSGEFDPTQEEEYERIHMPKNTPTGIYVSAWSLVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S I  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLIGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|167551745|ref|ZP_02345498.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205323501|gb|EDZ11340.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
          Length = 663

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    +  + ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQRGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLESQH 650


>gi|421480991|ref|ZP_15928577.1| cytochrome o ubiquinol oxidase subunit I [Achromobacter piechaudii
           HLE]
 gi|400200441|gb|EJO33391.1| cytochrome o ubiquinol oxidase subunit I [Achromobacter piechaudii
           HLE]
          Length = 658

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/583 (62%), Positives = 458/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++ G + GYLPP HY+QIFTAHGVIMIFFVA PL+ G++N +V
Sbjct: 68  MLLRGFADAIMMRAQQAMAVGDAAGYLPPHHYDQIFTAHGVIMIFFVATPLILGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+P +N+L FW+++ GA+LVMIS+F+G+FA+TGW+ YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPLVNSLGFWLSAVGAVLVMISMFVGDFAATGWVAYPPLSGLQYSPTVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT LSGIN I TI++MRAPGM LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLSGINFIVTILRMRAPGMNLMKMPVFTWTALITNILIVAVFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY   HFFTN+LGGN MMY+NLIWIWGHPEVYIL+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTMDRYFDMHFFTNELGGNAMMYINLIWIWGHPEVYILILPAFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGILSFFVWLHHFFTMGSGANVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRIR+    LWTIGFM+TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMFRGRIRYHSATLWTIGFMVTFAIGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ +WFPK +G+ L  FWGK SFW WLIGF++AFMPLYILGF G+TRRM+H+ 
Sbjct: 428 VVFGCLAGLTFWFPKVYGFTLNEFWGKTSFWCWLIGFFLAFMPLYILGFKGMTRRMNHYP 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q +  +A  G ++I +GILS +IQ+ VS + R    D+TGDPW+ R+LEW+T+SP 
Sbjct: 488 HADWQPYLIVALVGAVIIGLGILSLLIQIAVSIKDRKQNRDLTGDPWDARSLEWATASPV 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P I   +  W  K++   + +  K+  I MP+NT +G  IS++ L++ FALV
Sbjct: 548 PSYNFAVTPEITSLEQHWDNKQSGRAYVRPAKYDPIHMPRNTAVGFAISMWGLLLCFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WHMW + + S +  +I  +  +++   ++YI + E+  IE  R
Sbjct: 608 WHMWAVAVGSLVAIVITFVVRSYDRDVDFYIPAAEVESIENAR 650


>gi|226952681|ref|ZP_03823145.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. ATCC
           27244]
 gi|226836587|gb|EEH68970.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. ATCC
           27244]
          Length = 660

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 469/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 67  MLLRGFADAIMMRLQLFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 127 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLALGEFAATGWMAYPPLSGIEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 187 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 247 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 307 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRITYTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW IGFY AFMPLYILGFMG+TRR++ ++
Sbjct: 427 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFIGFYFAFMPLYILGFMGMTRRLNTYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI  F++Q+IV + +R   +D TGDPW+GRT EW+TSSP 
Sbjct: 487 NPEWDPYLAIALFGAVLIAIGIACFLMQIIVGFLQRKDNMDYTGDPWDGRTFEWATSSPA 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +W  K+N   + ++ K++DI MP N   G +I++F  I+GFAL+
Sbjct: 547 PFYNFAHLPAADGIDRFWTDKENGVAYARNTKYEDIHMPTNRAAGFVIAMFITILGFALI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +SF+  +I  I ++F    +YY+ + E+  IE +R  L
Sbjct: 607 WHIWWLVAVSFVAAIISFIVSSFTKNVDYYVPAAEVERIENERYAL 652


>gi|90409890|ref|ZP_01217907.1| cytochrome o ubiquinol oxidase, subunit I [Photobacterium profundum
           3TCK]
 gi|90329243|gb|EAS45500.1| cytochrome o ubiquinol oxidase, subunit I [Photobacterium profundum
           3TCK]
          Length = 679

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/591 (63%), Positives = 459/591 (77%), Gaps = 8/591 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFF+AMP + G++N +V
Sbjct: 68  MMVRGFADAVMMRSQQLLSAAGEGGYLPPHHYDQIFTAHGVIMIFFMAMPFIIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+   G +L+ +SL +GEFA TGWL YPPLS    SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLFIVGVVLINLSLGVGEFARTGWLAYPPLSEQQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT LSG+N   TI++MR P M +M MP+FTW +LC N+LI+ +FP+LT
Sbjct: 188 DYWIWALQISGIGTTLSGVNFFTTILRMRTPSMPMMKMPVFTWASLCANVLIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTN+LGGN+MMY+NLIW WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTIALLTLDRYVGTHFFTNELGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATVVIT+LS++VWLHHFFTMGSGANVNAFFGI+TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVVITILSFVVWLHHFFTMGSGANVNAFFGISTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GFMITF +GGM GV+L+VP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIEFTTPMLWTLGFMITFTVGGMTGVLLSVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G  YWFPKA G+ L   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGFAYWFPKATGFTLNEMWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AAFG  LI  GI+  + Q++VS R R +  DITGDPW  RT EWSTSSPP
Sbjct: 488 DPQFLPLLAVAAFGAALIMCGIICQVTQIVVSIRDRESNRDITGDPWGARTFEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-----DKFQDILMPKNTNIGILISIFSLIMG 535
           P YNFA +P     D +WY K+     PK     +++Q I MP+NT  GI I+ FSLI G
Sbjct: 548 PFYNFAKLPKGDVLDGYWYEKQAALLSPKSETADEEYQPIHMPRNTATGIYIAGFSLIFG 607

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE---KKRI 583
           FA++W++W L  +  +  +   I ++FN   +YY++++E+  IE   K R+
Sbjct: 608 FAMIWYIWWLAGVGLLGMVGAWIAHSFNEDTDYYVTADEVRDIEMAHKARV 658


>gi|254193702|ref|ZP_04900134.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei S13]
 gi|169650453|gb|EDS83146.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei S13]
          Length = 670

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/587 (62%), Positives = 461/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRRPENRDPTGDPWGGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP +H  D + Y K+           +++DI MP NT+ G+ + +FSL++G
Sbjct: 547 PPPAYNFATIPTVHALDEFAYRKERGLGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FA VWH+W L I +    ++ VI  +      YYI ++ +  IE+KR
Sbjct: 607 FAAVWHIWWLAIAALAGIVVTVIAYSAGENDGYYIPADAVRRIEEKR 653


>gi|423138920|ref|ZP_17126558.1| cytOchrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. houtenae str. ATCC BAA-1581]
 gi|379051474|gb|EHY69365.1| cytOchrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. houtenae str. ATCC BAA-1581]
          Length = 663

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   ++  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVRDVEKLENQH 650


>gi|16759422|ref|NP_455039.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16763823|ref|NP_459438.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142806|ref|NP_806148.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|167992294|ref|ZP_02573392.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168232417|ref|ZP_02657475.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168237554|ref|ZP_02662612.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168240266|ref|ZP_02665198.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168261124|ref|ZP_02683097.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465533|ref|ZP_02699415.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168818949|ref|ZP_02830949.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194442831|ref|YP_002039684.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194448862|ref|YP_002044477.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194469415|ref|ZP_03075399.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194736449|ref|YP_002113473.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197250137|ref|YP_002145423.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197262600|ref|ZP_03162674.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|198244876|ref|YP_002214396.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200390761|ref|ZP_03217372.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205351753|ref|YP_002225554.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|207855922|ref|YP_002242573.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213425863|ref|ZP_03358613.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213855278|ref|ZP_03383518.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|238911426|ref|ZP_04655263.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289829172|ref|ZP_06546814.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|374978466|ref|ZP_09719808.1| Cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|375000170|ref|ZP_09724510.1| cytOchrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Infantis str. SARB27]
 gi|375117877|ref|ZP_09763044.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. SD3246]
 gi|375122538|ref|ZP_09767702.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum str. SG9]
 gi|378443946|ref|YP_005231578.1| cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|378448777|ref|YP_005236136.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|378698405|ref|YP_005180362.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|378956172|ref|YP_005213659.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum/pullorum str.
           RKS5078]
 gi|378960590|ref|YP_005218076.1| ubiquinol oxidase subunit I [Salmonella enterica subsp. enterica
           serovar Typhi str. P-stx-12]
 gi|378983047|ref|YP_005246202.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|378987844|ref|YP_005251008.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
 gi|379699662|ref|YP_005241390.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. ST4/74]
 gi|383495250|ref|YP_005395939.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 798]
 gi|386590375|ref|YP_006086775.1| Cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. B182]
 gi|409248887|ref|YP_006884725.1| ubiquinol oxidase polypeptide I [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|417356081|ref|ZP_12131726.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Give str. S5-487]
 gi|418511858|ref|ZP_13078106.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Pomona str. ATCC 10729]
 gi|418763200|ref|ZP_13319324.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35185]
 gi|418766734|ref|ZP_13322806.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35199]
 gi|418771905|ref|ZP_13327911.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21539]
 gi|418774844|ref|ZP_13330805.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 33953]
 gi|418781203|ref|ZP_13337088.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35188]
 gi|418784665|ref|ZP_13340502.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21559]
 gi|418791363|ref|ZP_13347126.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19447]
 gi|418793863|ref|ZP_13349589.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19449]
 gi|418799559|ref|ZP_13355225.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19567]
 gi|418804735|ref|ZP_13360339.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35202]
 gi|418807595|ref|ZP_13363153.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21550]
 gi|418812133|ref|ZP_13367657.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 22513]
 gi|418815492|ref|ZP_13370993.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21538]
 gi|418821327|ref|ZP_13376752.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 22425]
 gi|418831770|ref|ZP_13386720.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM N18486]
 gi|418835772|ref|ZP_13390663.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM N1543]
 gi|418838756|ref|ZP_13393598.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21554]
 gi|418844400|ref|ZP_13399192.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19443]
 gi|418848959|ref|ZP_13403694.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 37978]
 gi|418853318|ref|ZP_13408011.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19593]
 gi|418864283|ref|ZP_13418818.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19536]
 gi|418866306|ref|ZP_13420769.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 4176]
 gi|419727602|ref|ZP_14254570.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41579]
 gi|419733905|ref|ZP_14260800.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41563]
 gi|419738885|ref|ZP_14265641.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41573]
 gi|419743012|ref|ZP_14269680.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41566]
 gi|419749558|ref|ZP_14276037.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41565]
 gi|419788927|ref|ZP_14314610.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. Levine 1]
 gi|419793969|ref|ZP_14319585.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. Levine 15]
 gi|421357768|ref|ZP_15808076.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 622731-39]
 gi|421365238|ref|ZP_15815460.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 639016-6]
 gi|421368987|ref|ZP_15819171.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 640631]
 gi|421372435|ref|ZP_15822584.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 77-0424]
 gi|421376046|ref|ZP_15826155.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607307-6]
 gi|421380616|ref|ZP_15830678.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 485549-17]
 gi|421383980|ref|ZP_15834009.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 596866-22]
 gi|421392481|ref|ZP_15842438.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 596866-70]
 gi|421396002|ref|ZP_15845934.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 629164-26]
 gi|421398661|ref|ZP_15848566.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 629164-37]
 gi|421405157|ref|ZP_15854992.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 639672-46]
 gi|421407756|ref|ZP_15857563.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 639672-50]
 gi|421412099|ref|ZP_15861862.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 77-1427]
 gi|421419446|ref|ZP_15869138.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 77-2659]
 gi|421423877|ref|ZP_15873528.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 78-1757]
 gi|421425631|ref|ZP_15875266.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 22510-1]
 gi|421429979|ref|ZP_15879573.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 8b-1]
 gi|421436806|ref|ZP_15886332.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648905 5-18]
 gi|421439179|ref|ZP_15888670.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 6-18]
 gi|421445854|ref|ZP_15895275.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 50-3079]
 gi|421451194|ref|ZP_15900560.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 58-6482]
 gi|421572552|ref|ZP_16018198.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00322]
 gi|421577461|ref|ZP_16023049.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00325]
 gi|421582050|ref|ZP_16027591.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00326]
 gi|421584551|ref|ZP_16030059.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00328]
 gi|421884334|ref|ZP_16315549.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Senftenberg str. SS209]
 gi|422024577|ref|ZP_16371054.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm1]
 gi|422029600|ref|ZP_16375856.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm2]
 gi|427545779|ref|ZP_18926365.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm8]
 gi|427562127|ref|ZP_18931130.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm9]
 gi|427580630|ref|ZP_18935952.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm3]
 gi|427602838|ref|ZP_18940728.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm4]
 gi|427627506|ref|ZP_18945638.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm6]
 gi|427650787|ref|ZP_18950394.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm10]
 gi|427659807|ref|ZP_18955348.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm11]
 gi|427664920|ref|ZP_18960094.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm12]
 gi|436594107|ref|ZP_20512341.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 22704]
 gi|436739474|ref|ZP_20519620.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE30663]
 gi|436797190|ref|ZP_20523136.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CHS44]
 gi|436810595|ref|ZP_20529633.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|436813657|ref|ZP_20531845.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|436831381|ref|ZP_20536049.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|436849779|ref|ZP_20540916.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|436856192|ref|ZP_20545297.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|436863177|ref|ZP_20549720.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|436871653|ref|ZP_20554827.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|436878804|ref|ZP_20559223.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|436886919|ref|ZP_20563325.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|436894414|ref|ZP_20567892.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|436904540|ref|ZP_20574557.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|436909983|ref|ZP_20576568.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|436918236|ref|ZP_20581407.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|436925543|ref|ZP_20585975.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|436934276|ref|ZP_20590280.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|436941296|ref|ZP_20594856.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|436949286|ref|ZP_20599300.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|436959662|ref|ZP_20603859.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|436975120|ref|ZP_20611396.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|436987188|ref|ZP_20615832.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|436999725|ref|ZP_20620298.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|437010043|ref|ZP_20624023.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|437018160|ref|ZP_20626652.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|437035555|ref|ZP_20633481.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|437046595|ref|ZP_20638411.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|437049346|ref|ZP_20639966.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|437056840|ref|ZP_20644208.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|437065292|ref|ZP_20648977.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|437078928|ref|ZP_20656422.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|437081952|ref|ZP_20658027.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|437089976|ref|ZP_20662548.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 576709]
 gi|437117158|ref|ZP_20669778.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 635290-58]
 gi|437122547|ref|ZP_20672389.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607308-16]
 gi|437132648|ref|ZP_20678098.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607308-19]
 gi|437137755|ref|ZP_20680550.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607307-2]
 gi|437149068|ref|ZP_20687941.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607308-9]
 gi|437151973|ref|ZP_20689644.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 629163]
 gi|437160921|ref|ZP_20694994.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE15-1]
 gi|437172778|ref|ZP_20701301.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_N202]
 gi|437176833|ref|ZP_20703637.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_56-3991]
 gi|437188242|ref|ZP_20710246.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_76-3618]
 gi|437238177|ref|ZP_20714094.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 13183-1]
 gi|437259703|ref|ZP_20717223.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_81-2490]
 gi|437272714|ref|ZP_20724464.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SL909]
 gi|437274732|ref|ZP_20725424.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SL913]
 gi|437288352|ref|ZP_20730686.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_69-4941]
 gi|437307013|ref|ZP_20734655.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 638970-15]
 gi|437329145|ref|ZP_20741235.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 17927]
 gi|437338524|ref|ZP_20743729.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CHS4]
 gi|437353354|ref|ZP_20747845.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 22558]
 gi|437404303|ref|ZP_20752079.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 543463 22-17]
 gi|437456270|ref|ZP_20760389.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 543463 40-18]
 gi|437470007|ref|ZP_20765022.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 561362 1-1]
 gi|437485273|ref|ZP_20769385.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 642044 4-1]
 gi|437499050|ref|ZP_20773859.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 642046 4-7]
 gi|437513529|ref|ZP_20777507.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648898 4-5]
 gi|437531382|ref|ZP_20780752.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648899 3-17]
 gi|437554746|ref|ZP_20784518.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648900 1-16]
 gi|437571691|ref|ZP_20788800.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 1-17]
 gi|437595750|ref|ZP_20796003.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 39-2]
 gi|437602368|ref|ZP_20798375.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648902 6-8]
 gi|437625354|ref|ZP_20805439.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648903 1-6]
 gi|437632909|ref|ZP_20806602.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648904 3-6]
 gi|437658479|ref|ZP_20811686.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 653049 13-19]
 gi|437672071|ref|ZP_20816070.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 642044 8-1]
 gi|437694793|ref|ZP_20821868.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 561362 9-7]
 gi|437710346|ref|ZP_20826451.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 543463 42-20]
 gi|437726129|ref|ZP_20829934.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 16-16]
 gi|437763926|ref|ZP_20834990.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 76-2651]
 gi|437811607|ref|ZP_20841199.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 33944]
 gi|437833267|ref|ZP_20844615.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SARB17]
 gi|437880788|ref|ZP_20848884.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 6.0562-1]
 gi|438031694|ref|ZP_20855331.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 50-5646]
 gi|438091454|ref|ZP_20860965.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 81-2625]
 gi|438105786|ref|ZP_20866404.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 62-1976]
 gi|438114461|ref|ZP_20870077.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 53-407]
 gi|438147689|ref|ZP_20876182.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Pullorum str. ATCC 9120]
 gi|440761968|ref|ZP_20941034.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SH11G1113]
 gi|440768715|ref|ZP_20947680.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SH08SF124]
 gi|440772493|ref|ZP_20951397.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SH10GFN094]
 gi|445132403|ref|ZP_21382190.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9184]
 gi|445144191|ref|ZP_21386940.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. SL1438]
 gi|445150696|ref|ZP_21389842.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. HWS51]
 gi|445172327|ref|ZP_21396418.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE8a]
 gi|445214956|ref|ZP_21401740.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 20037]
 gi|445232589|ref|ZP_21406102.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE10]
 gi|445267500|ref|ZP_21410157.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 436]
 gi|445337403|ref|ZP_21415960.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 18569]
 gi|445343528|ref|ZP_21416997.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 13-1]
 gi|445362564|ref|ZP_21424324.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. PT23]
 gi|452121297|ref|YP_007471545.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Javiana str. CFSAN001992]
 gi|25285457|pir||AE0557 cytochrome o ubiquinol oxidase chain I [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16418949|gb|AAL19397.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16501713|emb|CAD08901.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29138438|gb|AAO70008.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|194401494|gb|ACF61716.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407166|gb|ACF67385.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194455779|gb|EDX44618.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194711951|gb|ACF91172.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195632008|gb|EDX50528.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197213840|gb|ACH51237.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197240855|gb|EDY23475.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289475|gb|EDY28838.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197939392|gb|ACH76725.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199603206|gb|EDZ01752.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205271534|emb|CAR36352.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205329508|gb|EDZ16272.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333381|gb|EDZ20145.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205340042|gb|EDZ26806.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205344232|gb|EDZ30996.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205349728|gb|EDZ36359.1| cytochrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206707725|emb|CAR32010.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|261245725|emb|CBG23522.1| cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267992155|gb|ACY87040.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157053|emb|CBW16537.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312911475|dbj|BAJ35449.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320084715|emb|CBY94506.1| ubiquinol oxidase polypeptide I [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226018|gb|EFX51069.1| Cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323128761|gb|ADX16191.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. ST4/74]
 gi|326622144|gb|EGE28489.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. SD3246]
 gi|326626788|gb|EGE33131.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum str. SG9]
 gi|332987391|gb|AEF06374.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
 gi|353074858|gb|EHB40618.1| cytOchrome o ubiquinol oxidase, subunit I [Salmonella enterica
           subsp. enterica serovar Infantis str. SARB27]
 gi|353597172|gb|EHC53963.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Give str. S5-487]
 gi|357206783|gb|AET54829.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum/pullorum str.
           RKS5078]
 gi|366084175|gb|EHN48086.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Pomona str. ATCC 10729]
 gi|374354462|gb|AEZ46223.1| Ubiquinol oxidase subunit 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. P-stx-12]
 gi|379986048|emb|CCF87822.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Senftenberg str. SS209]
 gi|380462071|gb|AFD57474.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 798]
 gi|381299092|gb|EIC40166.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41563]
 gi|381300725|gb|EIC41783.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41573]
 gi|381301184|gb|EIC42240.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41579]
 gi|381310714|gb|EIC51540.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41565]
 gi|381312564|gb|EIC53361.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. 41566]
 gi|383797419|gb|AFH44501.1| Cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. B182]
 gi|392616059|gb|EIW98494.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. Levine 15]
 gi|392616393|gb|EIW98826.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. Levine 1]
 gi|392733480|gb|EIZ90682.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21539]
 gi|392734444|gb|EIZ91626.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35185]
 gi|392736745|gb|EIZ93907.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35199]
 gi|392747930|gb|EJA04921.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35188]
 gi|392750044|gb|EJA07020.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 33953]
 gi|392754196|gb|EJA11115.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21559]
 gi|392755452|gb|EJA12362.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19447]
 gi|392763543|gb|EJA20350.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19449]
 gi|392763877|gb|EJA20683.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19567]
 gi|392769764|gb|EJA26493.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 35202]
 gi|392776873|gb|EJA33559.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 22513]
 gi|392778858|gb|EJA35529.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21550]
 gi|392790922|gb|EJA47415.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 22425]
 gi|392791944|gb|EJA48412.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21538]
 gi|392798667|gb|EJA54938.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM N18486]
 gi|392803047|gb|EJA59248.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM N1543]
 gi|392814582|gb|EJA70533.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 21554]
 gi|392815220|gb|EJA71164.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19443]
 gi|392822306|gb|EJA78118.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 37978]
 gi|392827366|gb|EJA83075.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19593]
 gi|392831544|gb|EJA87177.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19536]
 gi|392840216|gb|EJA95752.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 4176]
 gi|395980749|gb|EJH89972.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 639016-6]
 gi|395983282|gb|EJH92475.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 640631]
 gi|395990005|gb|EJH99137.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 622731-39]
 gi|396000085|gb|EJI09100.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 77-0424]
 gi|396003273|gb|EJI12261.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607307-6]
 gi|396003665|gb|EJI12652.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 485549-17]
 gi|396008042|gb|EJI16977.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 596866-70]
 gi|396011046|gb|EJI19957.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 629164-26]
 gi|396020542|gb|EJI29383.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 596866-22]
 gi|396024468|gb|EJI33254.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 639672-46]
 gi|396029688|gb|EJI38424.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 639672-50]
 gi|396030451|gb|EJI39185.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 629164-37]
 gi|396035586|gb|EJI44258.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 77-2659]
 gi|396035925|gb|EJI44596.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 78-1757]
 gi|396044347|gb|EJI52944.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 77-1427]
 gi|396052126|gb|EJI60634.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648905 5-18]
 gi|396056902|gb|EJI65375.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 22510-1]
 gi|396057296|gb|EJI65768.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 8b-1]
 gi|396063949|gb|EJI72337.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 58-6482]
 gi|396064289|gb|EJI72676.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 50-3079]
 gi|396071385|gb|EJI79710.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 6-18]
 gi|402515487|gb|EJW22901.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00326]
 gi|402516049|gb|EJW23462.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00325]
 gi|402516378|gb|EJW23789.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00322]
 gi|402531069|gb|EJW38282.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Heidelberg str. CFSAN00328]
 gi|414023301|gb|EKT06735.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm1]
 gi|414023842|gb|EKT07256.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm8]
 gi|414025318|gb|EKT08648.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm2]
 gi|414037182|gb|EKT19966.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm9]
 gi|414038652|gb|EKT21359.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm3]
 gi|414042381|gb|EKT24919.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm4]
 gi|414051728|gb|EKT33812.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm10]
 gi|414053177|gb|EKT35189.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm6]
 gi|414057643|gb|EKT39396.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm11]
 gi|414061841|gb|EKT43218.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhimurium str. STm12]
 gi|434938420|gb|ELL45398.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Pullorum str. ATCC 9120]
 gi|434961262|gb|ELL54580.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CHS44]
 gi|434965087|gb|ELL58050.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|434975165|gb|ELL67475.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|434976915|gb|ELL69094.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE30663]
 gi|434977761|gb|ELL69854.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 22704]
 gi|434982338|gb|ELL74161.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|434988356|gb|ELL79955.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|434991625|gb|ELL83113.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|434997704|gb|ELL88943.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|435000868|gb|ELL91990.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|435007480|gb|ELL98333.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|435011451|gb|ELM02171.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|435017062|gb|ELM07570.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|435018228|gb|ELM08703.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|435028356|gb|ELM18435.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|435030968|gb|ELM20957.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|435039936|gb|ELM29705.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|435041416|gb|ELM31158.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|435045127|gb|ELM34772.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|435050071|gb|ELM39576.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|435053984|gb|ELM43420.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|435054327|gb|ELM43762.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|435059769|gb|ELM49044.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|435060266|gb|ELM49536.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|435066943|gb|ELM56014.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|435074922|gb|ELM63745.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|435078065|gb|ELM66809.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|435081752|gb|ELM70393.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|435096358|gb|ELM84630.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|435096884|gb|ELM85146.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|435099940|gb|ELM88131.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|435101284|gb|ELM89438.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|435111120|gb|ELM99025.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|435113530|gb|ELN01376.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 635290-58]
 gi|435114994|gb|ELN02784.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 576709]
 gi|435122195|gb|ELN09717.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607308-19]
 gi|435123373|gb|ELN10866.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607308-16]
 gi|435130877|gb|ELN18105.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607308-9]
 gi|435134389|gb|ELN21517.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 607307-2]
 gi|435143446|gb|ELN30312.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 629163]
 gi|435143855|gb|ELN30709.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_N202]
 gi|435146434|gb|ELN33227.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE15-1]
 gi|435155558|gb|ELN42102.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_56-3991]
 gi|435156162|gb|ELN42664.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_76-3618]
 gi|435165091|gb|ELN51151.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_81-2490]
 gi|435168046|gb|ELN53899.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SL909]
 gi|435175810|gb|ELN61213.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SL913]
 gi|435183752|gb|ELN68713.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CVM_69-4941]
 gi|435185200|gb|ELN70083.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 13183-1]
 gi|435187001|gb|ELN71814.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 638970-15]
 gi|435190676|gb|ELN75258.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 17927]
 gi|435195915|gb|ELN80271.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. CHS4]
 gi|435205378|gb|ELN88977.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 543463 22-17]
 gi|435206977|gb|ELN90469.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 543463 40-18]
 gi|435212159|gb|ELN95184.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 22558]
 gi|435214892|gb|ELN97640.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 561362 1-1]
 gi|435216448|gb|ELN98923.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 642044 4-1]
 gi|435223973|gb|ELO05957.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 642046 4-7]
 gi|435230166|gb|ELO11500.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648898 4-5]
 gi|435243448|gb|ELO23706.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648899 3-17]
 gi|435243622|gb|ELO23879.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648900 1-16]
 gi|435248144|gb|ELO28065.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 1-17]
 gi|435250909|gb|ELO30619.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 39-2]
 gi|435253173|gb|ELO32661.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648903 1-6]
 gi|435260056|gb|ELO39269.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648902 6-8]
 gi|435270478|gb|ELO48974.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 653049 13-19]
 gi|435278373|gb|ELO56244.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 561362 9-7]
 gi|435279713|gb|ELO57457.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 642044 8-1]
 gi|435282543|gb|ELO60158.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648904 3-6]
 gi|435289119|gb|ELO66109.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 543463 42-20]
 gi|435292079|gb|ELO68868.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 648901 16-16]
 gi|435297961|gb|ELO74218.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 33944]
 gi|435302253|gb|ELO78228.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SARB17]
 gi|435308372|gb|ELO83335.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 76-2651]
 gi|435315863|gb|ELO89083.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 81-2625]
 gi|435321475|gb|ELO93890.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 62-1976]
 gi|435327438|gb|ELO99135.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 50-5646]
 gi|435328860|gb|ELP00318.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 53-407]
 gi|435333607|gb|ELP04401.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 6.0562-1]
 gi|436416434|gb|ELP14340.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SH08SF124]
 gi|436418442|gb|ELP16326.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SH10GFN094]
 gi|436424260|gb|ELP22043.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Agona str. SH11G1113]
 gi|444847331|gb|ELX72481.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. SL1438]
 gi|444849091|gb|ELX74208.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9184]
 gi|444856533|gb|ELX81560.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Dublin str. HWS51]
 gi|444859552|gb|ELX84496.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 20037]
 gi|444860434|gb|ELX85349.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE8a]
 gi|444862177|gb|ELX87037.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE10]
 gi|444873403|gb|ELX97700.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 18569]
 gi|444881332|gb|ELY05376.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 13-1]
 gi|444884243|gb|ELY08087.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. PT23]
 gi|444888193|gb|ELY11804.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 436]
 gi|451910301|gb|AGF82107.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Javiana str. CFSAN001992]
          Length = 663

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|416958760|ref|ZP_11936091.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia sp. TJI49]
 gi|325522320|gb|EGD00932.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia sp. TJI49]
          Length = 668

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 468/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQVFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVISTFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIGCQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P    F+DI MP NT  G++I +FSL++GFA
Sbjct: 547 PPADYNFAVIPQVRTLDAYADMKARGHGRPNPATFRDIHMPSNTCAGLVIGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +VWH+W L I   + I   +V+Y++ +    YYI +  +  IE+K+
Sbjct: 607 MVWHIWWLAIAGLVGIVATLVVYSSRD-NDGYYIPASTVRKIEEKQ 651


>gi|94676941|ref|YP_588718.1| ubiquinol oxidase, polypeptide I [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220091|gb|ABF14250.1| ubiquinol oxidase, polypeptide I [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 665

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/585 (63%), Positives = 459/585 (78%), Gaps = 2/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ ++     G+LPP HY+Q+ TAHGVIMI F+A P + G+IN IV
Sbjct: 68  MLLRGFADAIMMRLQQVLASAGDIGFLPPHHYDQVVTAHGVIMIIFMATPFIIGLINLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ ISL +GEFA TGW  YPPL+    SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVVGVILINISLGVGEFAQTGWAAYPPLASKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QIAGIGT L+GIN I TI+ MRAPGM +M MP+FTWTALCTN LIVAAFP+LT
Sbjct: 188 DYWIWSIQIAGIGTTLTGINFITTILCMRAPGMTMMKMPVFTWTALCTNTLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTND+GGN MMY+NL W WGHPEVYIL LPVFG+FSEVVSTFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDMGGNAMMYINLFWAWGHPEVYILALPVFGVFSEVVSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K +FGY S+V+AT+ IT+LS+ VWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KPIFGYKSLVWATIAITVLSFCVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF IGGMAGV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSSMLWTIGFIVTFSIGGMAGVLLAVPGADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+NYWFPK FG+ L   WGK +FW W+IGFYVAFMP+Y LG MG+TRR+S   
Sbjct: 428 VIFGCFAGMNYWFPKFFGFTLSEIWGKRAFWCWIIGFYVAFMPIYALGLMGMTRRLSQHI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +       AA GT+LI +GI   ++Q++VS R R+   D+TG+PW G+TLEW+T SPP
Sbjct: 488 DPTFHPLLVSAAVGTMLITLGICCQVVQILVSIRDRNKNRDLTGNPWGGKTLEWTTISPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P + Q ++        N      + ++ I MPKNT+IGI+I++FSL+MGFAL
Sbjct: 548 PFYNFAILPQLDQHNNALLQSTDINEQNNNINVYKPIHMPKNTSIGIIIAVFSLMMGFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           +W++W L I+SF+  +I  I N+FN + +YY+S EEI  IE + +
Sbjct: 608 IWYIWWLAIVSFVCIIITWIMNSFNTEVDYYVSVEEIQRIENEHL 652


>gi|422321297|ref|ZP_16402346.1| cytochrome O ubiquinol oxidase subunit I [Achromobacter
           xylosoxidans C54]
 gi|317403855|gb|EFV84329.1| cytochrome O ubiquinol oxidase subunit I [Achromobacter
           xylosoxidans C54]
          Length = 658

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/585 (62%), Positives = 462/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+MISLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVALMMISLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN I TI++MRAPGM LM MPIFTWT+L TN+LIVAAFPVL 
Sbjct: 188 DYYIWALQISGLGTTLSGINFIVTILRMRAPGMSLMKMPIFTWTSLVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+GTHFFTND+GGN+MMYVNLIWIWGHPEVYILVLP FG++SEVV+TF+ 
Sbjct: 248 ATLALLTMDRYLGTHFFTNDMGGNVMMYVNLIWIWGHPEVYILVLPAFGVYSEVVATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAKIFNWL
Sbjct: 308 KTLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R   P+LWT+GFM+ FVIGGM GV+LA+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRITTPVLWTLGFMLVFVIGGMTGVMLAIPGVSFVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    G+ SF+ W +GF++AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAGMTYWFPKAFGFKLNERLGRYSFYCWFVGFFLAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R+R    DITGDPW+GRTLEWS SSP 
Sbjct: 488 NPEWQPYLLVALAGAALIMLGIWFLLQQVFVSVRQRKQNQDITGDPWDGRTLEWSISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D +W  K+N   + +  K++DI MPKNT  G+ I  F L+M FAL+
Sbjct: 548 PFYNFAHVPHVDELDQFWEDKQNGKAYKRPAKYEDIHMPKNTAAGVFIGAFGLVMCFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L+I+ F+  +   I   ++   +Y++ + E+  IE     
Sbjct: 608 WHIWWLSIVGFVGMIGSFIVRAYDRDVDYWVPAAEVERIENAHFE 652


>gi|418860800|ref|ZP_13415375.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19470]
 gi|392826184|gb|EJA81917.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19470]
          Length = 663

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWMAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|339998414|ref|YP_004729297.1| cytochrome O ubiquinol oxidase subunit I [Salmonella bongori NCTC
           12419]
 gi|339511775|emb|CCC29484.1| cytochrome O ubiquinol oxidase subunit I [Salmonella bongori NCTC
           12419]
          Length = 663

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAGGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPAQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I SF   +I  I  +F+   +YY+   ++  +E + 
Sbjct: 608 WHIWWLAIASFAGMIISWIVKSFDEDVDYYVPVRDVEKLENQH 650


>gi|107028750|ref|YP_625845.1| cytochrome-c oxidase [Burkholderia cenocepacia AU 1054]
 gi|116690091|ref|YP_835714.1| cytochrome-c oxidase [Burkholderia cenocepacia HI2424]
 gi|170733425|ref|YP_001765372.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia cenocepacia
           MC0-3]
 gi|254247834|ref|ZP_04941155.1| cytochrome oxidase subunit I [Burkholderia cenocepacia PC184]
 gi|105897914|gb|ABF80872.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           cenocepacia AU 1054]
 gi|116648180|gb|ABK08821.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           cenocepacia HI2424]
 gi|124872610|gb|EAY64326.1| cytochrome oxidase subunit I [Burkholderia cenocepacia PC184]
 gi|169816667|gb|ACA91250.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia cenocepacia
           MC0-3]
          Length = 668

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 467/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINLSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TF+ 
Sbjct: 247 ATLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R RH     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRHLPEYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P    F+DI MP NT  G++I++FSL++GFA
Sbjct: 547 PPADYNFAVIPQVRTLDAYADMKARGEGRPNPATFRDIHMPSNTCAGLVIAVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWMAIGGLVGIIATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|418827029|ref|ZP_13382194.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 22462]
 gi|392802182|gb|EJA58399.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 22462]
          Length = 652

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/585 (63%), Positives = 466/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+   E+  + K   R
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLGKPAFR 652


>gi|213052105|ref|ZP_03344983.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 604

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 466/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 9   MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 68

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 69  PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 128

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 129 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 188

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 189 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 248

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 249 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 308

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 309 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 368

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 369 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 428

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 429 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 488

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 489 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 548

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 549 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 591


>gi|114327939|ref|YP_745096.1| cytochrome O ubiquinol oxidase subunit I [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316113|gb|ABI62173.1| cytochrome O ubiquinol oxidase subunit I [Granulibacter
           bethesdensis CGDNIH1]
          Length = 663

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/585 (61%), Positives = 457/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G   GYLPPEHY+Q+F+AHG IMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQLALASGDKPGYLPPEHYDQVFSAHGTIMIFFMAMPFVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+T+  A+L+ +SL IGEF+  GWL YPPLS +  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLTAVSAVLINVSLAIGEFSRAGWLAYPPLSELQYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLLSG+N   TI++MR PGM  M MPIF+WT+LC N+LI+AAFP+LT
Sbjct: 188 DYYIWALQISGIGTLLSGVNFFVTILRMRGPGMTFMKMPIFSWTSLCANVLIMAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFT D GGN MMYVNLIW WGHPEVYILVLP FGIFSE+ +TFSS
Sbjct: 248 VTLALLSLDRYLGMHFFTTDGGGNQMMYVNLIWAWGHPEVYILVLPAFGIFSEITATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYATV IT+LS+IVWLHHFFTMG+G +VNAFFGITTMIISIPTG K+FNW+
Sbjct: 308 KKLFGYTSMVYATVAITILSFIVWLHHFFTMGAGPDVNAFFGITTMIISIPTGVKVFNWV 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LWTIGF+ TFVIGGM GV++AVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYGGRVRFTAPMLWTIGFICTFVIGGMTGVLMAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPK FG+KL+  WGK +FW WL+GFY+AFMPLY+LGFMG TRRM+H++
Sbjct: 428 VLFGYVAGYNYWFPKMFGFKLDETWGKRAFWCWLVGFYLAFMPLYVLGFMGATRRMNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  IA  G ++I  GI   ++Q +VS R R    D+TGDPWNG TLEW+T+SPP
Sbjct: 488 NPAWTPWMIIAFIGAVVIFAGIGCQLMQFVVSLRDRKRNADLTGDPWNGPTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +  ++  W    +   +  +  ++DI MP+NT  G +I +F+ + GF +V
Sbjct: 548 PFYNFAIVPEVDDAEPLWSETFQAQRRLARPHYEDIHMPRNTPAGFIIGVFAFLFGFGMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W +W + I+  I  ++ +I  T N   +YY+ + ++  IE   +R
Sbjct: 608 WQIWWMAILGVIGGMLTLIIRTCNDDIDYYVPAADVARIEDANLR 652


>gi|91225750|ref|ZP_01260779.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio alginolyticus
           12G01]
 gi|269968097|ref|ZP_06182134.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio alginolyticus
           40B]
 gi|91189639|gb|EAS75914.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio alginolyticus
           12G01]
 gi|269827343|gb|EEZ81640.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio alginolyticus
           40B]
          Length = 678

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/586 (62%), Positives = 465/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATVVIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    IAA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLSIAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++  F   K+ +++ I MPKNT  GI +S +SL+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPTKEVEYERIHMPKNTATGIYVSAWSLLFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            ++W++W L   S +  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 606 GMIWYIWWLAAASLVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|312881376|ref|ZP_07741173.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309371016|gb|EFP98471.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 678

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/584 (62%), Positives = 460/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGQTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N + TI+KMR P M +M MP+FTWT+LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFLVTILKMRTPSMPIMKMPVFTWTSLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYILVLP+FG+FSEV +TF+ 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILVLPLFGVFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+++AT+ IT+L++IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLIWATIAITILAFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF+ITF +GGM GV+LAVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRITYTTPMLWTVGFLITFTVGGMTGVLLAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA G+ +   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMAYWFPKATGFTMNETWGKRAFYLWIIGFLMAFLPLYALGFMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IAMGI    IQ+ VS R R   +D+TGDPW+ RT EWSTSSPP
Sbjct: 488 NPEFLPLLSVAAAGTAVIAMGIACQFIQIYVSIRDREQNLDLTGDPWDARTFEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P   + D++WY K++    P  + +++ I MPKNT  GI +S +SL+ GFA+
Sbjct: 548 PFYNFAHLPKGDEVDNFWYQKQSGEFDPMKEVEYERIHMPKNTPTGIYLSGWSLVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SFI  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFIGMVVTCIRHSYNDDVDYYVEVEEIKAIEAER 651


>gi|167589184|ref|ZP_02381572.1| Cytochrome-c oxidase [Burkholderia ubonensis Bu]
          Length = 669

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 467/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+S+ +  G+LPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALSYNAP-GFLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMSLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TF+ 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFSTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW IGFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQIGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPQSRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +   D++  MK +   +     ++DI MP NT+ G+ + +FSL +GFA
Sbjct: 547 PPPAYNFATIPQVRTLDAFADMKARGEGQGKSATYRDIHMPSNTSAGLFVGVFSLALGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I     I   +VIY++ N    YYI +  +  IE+ R
Sbjct: 607 LVWHIWWLAIAGLAGIVATLVIYSSRN-NDGYYIPASTVRRIEEPR 651


>gi|76811850|ref|YP_334218.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 1710b]
 gi|226199907|ref|ZP_03795457.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pakistan 9]
 gi|254195949|ref|ZP_04902375.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei S13]
 gi|254259671|ref|ZP_04950725.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1710a]
 gi|254296929|ref|ZP_04964382.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 406e]
 gi|76581303|gb|ABA50778.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 1710b]
 gi|157807315|gb|EDO84485.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 406e]
 gi|169652694|gb|EDS85387.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei S13]
 gi|225927963|gb|EEH24000.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pakistan 9]
 gi|254218360|gb|EET07744.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1710a]
          Length = 668

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/583 (62%), Positives = 466/583 (79%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVGLFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGVALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP++H  D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPVYNFAVIPIVHALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LVWH+W L I SF+  + +V+  +      YYI+++ +  IE+
Sbjct: 607 LVWHIWWLAIASFVGIVAMVVLYSAGENDGYYIAADTVREIEE 649


>gi|187477292|ref|YP_785316.1| ubiquinol oxidase polypeptide I [Bordetella avium 197N]
 gi|115421878|emb|CAJ48397.1| ubiquinol oxidase polypeptide I [Bordetella avium 197N]
          Length = 659

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/582 (63%), Positives = 457/582 (78%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 69  MLLRGFADAIMMRTQLAVASGDNPGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNLIV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+ S G  L+M+SLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 129 PLQIGARDVAYPFLNSLSFWLFSAGVALIMMSLFVGEFAATGWLAYPPLSGLEYSPSVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN I TI+KMRAPGM LM MP+FTWTAL TNILIVAAFPVL 
Sbjct: 189 DYYIWALQISGLGTTLSGINFIVTILKMRAPGMTLMKMPVFTWTALVTNILIVAAFPVLA 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FG FSE+++T+S 
Sbjct: 249 ATLALLTADRYMGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPCFGAFSEIIATYSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTG K+FNWL
Sbjct: 309 KPLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGVKVFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F  P+LWT+GFM+TFVIGGM GV++A+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRVVFTTPVLWTVGFMVTFVIGGMTGVLMAIPAVSFVLHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++ + YWFPKAFG+KL    G+ SFW W IGFY+AFMPLYILGF G+TRR++H++
Sbjct: 429 VVFGCIAAMTYWFPKAFGFKLNERLGRYSFWCWFIGFYLAFMPLYILGFKGMTRRLNHYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G   IA+GI   + Q+++S   R    D+TGDPWNGRTLEW+TSSPP
Sbjct: 489 NPEWQPYLIVALIGAFFIALGIWFLLQQVVMSIVDRKNNQDLTGDPWNGRTLEWATSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D  W  K+    F + K ++DI MP+NT  GI I  F LIM F L+
Sbjct: 549 PFYNFAHVPHVDSLDQHWEDKERGVAFKQPKTYEDIHMPRNTAAGIYIGAFGLIMSFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L I+  +  +   I   F+   +YY+ + E+  IE +
Sbjct: 609 WHIWWLAIVGLVGMIGSFIVRAFDRDIDYYVPAAEVERIENE 650


>gi|161504381|ref|YP_001571493.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:- str. RSK2980]
 gi|160865728|gb|ABX22351.1| hypothetical protein SARI_02492 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-]
          Length = 663

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDREQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +   +++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGHYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   ++  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVRDVEKLENQH 650


>gi|221215752|ref|ZP_03588712.1| ubiquinol oxidase, subunit I [Burkholderia multivorans CGD1]
 gi|221164364|gb|EED96850.1| ubiquinol oxidase, subunit I [Burkholderia multivorans CGD1]
          Length = 668

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 468/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIVTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIRFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK + + +      +DI MP NT  G++I +FSL++GFA
Sbjct: 547 PPAEYNFAVIPQVRTLDAYADMKARGDARANPAAIRDIHMPSNTCAGLVIGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I   + I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWLAIAGLVGIVATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|224582280|ref|YP_002636078.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|224466807|gb|ACN44637.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 663

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  +++ I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEAIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|84386636|ref|ZP_00989662.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio splendidus 12B01]
 gi|84378442|gb|EAP95299.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio splendidus 12B01]
          Length = 695

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 462/586 (78%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSAAGETGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGIILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATV IT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVAITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFILHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ L   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAIGYWFPKATGFTLNELWGKRAFYCWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT +IAMG++   +Q+ VS R R    D+TGDPW GRT EW+TSS
Sbjct: 486 DINPEFFPLLAVAAAGTGVIAMGVVCQFVQIYVSVRDRDQNRDLTGDPWGGRTFEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P   + DS+WY K++    P  +++++ I MPKNT  GI +S ++L  GF
Sbjct: 546 PPPFYNFAKLPKGDEIDSFWYQKQSGEFDPTQEEEYERIHMPKNTPTGIYVSAWALAFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|421467284|ref|ZP_15915920.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia multivorans
           ATCC BAA-247]
 gi|400233863|gb|EJO63371.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia multivorans
           ATCC BAA-247]
          Length = 668

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 468/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIRFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK + + +      +DI MP NT  G++I +FSL++GFA
Sbjct: 547 PPAEYNFAVIPQVRALDAYADMKARGDTRANPAAIRDIHMPSNTCAGLVIGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I   + I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWLAIAGLVGIVATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|161524383|ref|YP_001579395.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia multivorans
           ATCC 17616]
 gi|189350862|ref|YP_001946490.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia multivorans
           ATCC 17616]
 gi|421476582|ref|ZP_15924459.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia multivorans
           CF2]
 gi|160341812|gb|ABX14898.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia multivorans
           ATCC 17616]
 gi|189334884|dbj|BAG43954.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia multivorans
           ATCC 17616]
 gi|400228118|gb|EJO58075.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia multivorans
           CF2]
          Length = 668

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 468/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIRFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK + + +      +DI MP NT  G++I +FSL++GFA
Sbjct: 547 PPAEYNFAVIPQVRTLDAYADMKARGDARANPAAIRDIHMPSNTCAGLVIGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I   + I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWLAIAGLVGIVATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|221198372|ref|ZP_03571418.1| ubiquinol oxidase, subunit I [Burkholderia multivorans CGD2M]
 gi|221208951|ref|ZP_03581948.1| ubiquinol oxidase, subunit I [Burkholderia multivorans CGD2]
 gi|221171234|gb|EEE03684.1| ubiquinol oxidase, subunit I [Burkholderia multivorans CGD2]
 gi|221182304|gb|EEE14705.1| ubiquinol oxidase, subunit I [Burkholderia multivorans CGD2M]
          Length = 668

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 468/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIRFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK + + +      +DI MP NT  G++I +FSL++GFA
Sbjct: 547 PPAEYNFAVIPQVRTLDAYADMKARGDTRANPAAIRDIHMPSNTCAGLVIGVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I   + I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWLAIAGLVGIVATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|312961438|ref|ZP_07775941.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           WH6]
 gi|311284333|gb|EFQ62911.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           WH6]
          Length = 657

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/585 (61%), Positives = 459/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G   GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAAGGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTW ALCT++LI+A+FP+LT
Sbjct: 188 DYYIWSLQISGIGTLLTGVNFFVTILKMRTEGMTLFKMPVFTWNALCTSVLILASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+G HFFTN+ GGN MMYVNLIW WGHPEVYIL+LP FG+FSE+ +TFSS
Sbjct: 248 ATLLMLSLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMGSG NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYVSLVWATISITVLSFIVWLHHFFTMGSGGNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVRFETPMLWTLGFIVTFSIGGMTGVLLAVPGADFMLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G+ YWFPKAFG++L    G+ +FW WL GFY AFMP Y+LGFMG+TRR++HF 
Sbjct: 428 AVFGYMAGLTYWFPKAFGFRLYDRLGRIAFWCWLTGFYFAFMPSYVLGFMGMTRRLNHFN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I  G+ +  +QL VS R RH   D+TGDPW+GRTLEW+T+SPP
Sbjct: 488 NPEWRPWLLLELAGVAIILCGVAAQALQLFVSIRYRHRYRDLTGDPWDGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA  P +   D++W MK+          ++ I MP+NT  G++IS+F+L+  FALV
Sbjct: 548 PLYNFAEQPKVSDLDAYWGMKERGVSTLSHTDYRSIHMPRNTASGLVISLFALVCSFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +     + +++  +  +++   +Y++ ++E+  IE  R++
Sbjct: 608 WHIWWMAAFGLVASVVAFVVRSYDEDTDYFVPAQEVARIETARLK 652


>gi|422010040|ref|ZP_16357022.1| ubiquinol oxidase polypeptide [Providencia rettgeri Dmel1]
 gi|414092213|gb|EKT53892.1| ubiquinol oxidase polypeptide [Providencia rettgeri Dmel1]
          Length = 663

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 467/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N IATII+MR PGM +M MP+F+W ALCTN+LIVAAFP+LT
Sbjct: 188 DYWLWSLQISGIGTLLTGVNFIATIIRMRTPGMSMMKMPVFSWAALCTNVLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 248 VTLTLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVAATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIVITVMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEFKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+IGF++AFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAYGFTLNEKWGVRAFWFWIIGFFMAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      +AA G  LIA+GI   +IQ+IVS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPTYHTMLVVAAGGAALIAIGIACQVIQIIVSIRDRHENRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D+WW +K+      K   +++I MPKNT  G++I+ FSL++GFA++
Sbjct: 548 PFYNFAIEPHVQTRDAWWDLKEKGLAHKKPASYEEIHMPKNTGAGVIIAAFSLVLGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L II F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 608 WHIWWLAIIGFGGMIVTWIAKSFDEDVDYYVPVAEIEEIENKHFE 652


>gi|134296075|ref|YP_001119810.1| cytochrome-c oxidase [Burkholderia vietnamiensis G4]
 gi|387902605|ref|YP_006332944.1| cytochrome O ubiquinol oxidase subunit I [Burkholderia sp. KJ006]
 gi|134139232|gb|ABO54975.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           vietnamiensis G4]
 gi|387577497|gb|AFJ86213.1| Cytochrome O ubiquinol oxidase subunit I [Burkholderia sp. KJ006]
          Length = 667

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 469/586 (80%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ A+++ S  GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRLQLALAYNSP-GYLPPHHYDQVFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TI+KMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTILKMRAPGMSLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G NYWFPKAFG+KL    GK +FWFW IGFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQIGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA +P +   D++  MK      P     +DI MP NT  G++I+IFSL++GFA
Sbjct: 547 PPADYNFAVLPQVRTLDAYADMKARGDARPNPAAIRDIHMPSNTCAGLVIAIFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   I I   +VIY++ N    YYI + ++  IE+K+
Sbjct: 607 LVWHIWWMAIGGLIGIVATLVIYSSRN-NDGYYIPASKVRKIEEKQ 651


>gi|254191302|ref|ZP_04897806.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pasteur
           52237]
 gi|157938974|gb|EDO94644.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei Pasteur
           52237]
          Length = 668

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/583 (62%), Positives = 465/583 (79%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVGLFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGVALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP +H  D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPVYNFAVIPTVHALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LVWH+W L I SF+  + +V+  +      YYI+++ +  IE+
Sbjct: 607 LVWHIWWLAITSFVGIVAMVVLYSAGENDGYYIAADTVREIEE 649


>gi|352102826|ref|ZP_08959396.1| cytochrome o ubiquinol oxidase subunit I [Halomonas sp. HAL1]
 gi|350599677|gb|EHA15761.1| cytochrome o ubiquinol oxidase subunit I [Halomonas sp. HAL1]
          Length = 680

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G + GYLPPEHY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAAGGAAGYLPPEHYDQIFTAHGVIMIFFVAMPMVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+ +  AILV ISL +GEFA TGWL Y PLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLFAVAAILVNISLVVGEFAKTGWLAYAPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT L+GIN   TI+KMR  GM +  MPIFTWT+LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQISGIGTTLTGINFFVTILKMRTKGMTMFRMPIFTWTSLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+G HFFTND GGN+MMYVNLIW WGHPEVYIL+LP FG+FSEV+STF+ 
Sbjct: 248 ATIALLTLDRYLGMHFFTNDFGGNMMMYVNLIWAWGHPEVYILILPAFGVFSEVISTFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV+AT+ ITLLS++VWLHHFFTMG+GANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KRLFGYMTMVWATIAITLLSFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RG +    P+LWT+GF+ITF +GGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMFRGSLELTSPVLWTLGFIITFTLGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+M+G+ +WFPKAFG+ L   WGK +FW W IGFYVAFMPLY+L F G  RRM  + 
Sbjct: 428 VVFGMMAGLTFWFPKAFGFTLSEKWGKRAFWCWFIGFYVAFMPLYVLAFFGAVRRMQSYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q W  +A  G ++I MGI   IIQ  VS R R    D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 NPEWQPWMILAWVGAVIIMMGIACTIIQFWVSIRDRKLNADVTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   DS+W  K ++N +  +  + DI MP+NT  G +IS+F+L++GFALV
Sbjct: 548 PFYNFARLPEVGDIDSFWSQKQRSNEELEEAPYTDIHMPRNTVAGPVISLFALVIGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +  I   +  +   FN   +YY+ + E+  IE++ 
Sbjct: 608 WHIWWLAGVGAIGVFVSFMARVFNDDVDYYVPAAEVERIEREH 650


>gi|416424698|ref|ZP_11691879.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|416432823|ref|ZP_11696428.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|416440093|ref|ZP_11700674.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|416444549|ref|ZP_11703782.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|416453754|ref|ZP_11709828.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|416458580|ref|ZP_11713099.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|416465616|ref|ZP_11716938.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|416473274|ref|ZP_11719741.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|416484362|ref|ZP_11724158.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|416501563|ref|ZP_11732153.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|416510481|ref|ZP_11737079.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. SARB31]
 gi|416520594|ref|ZP_11740306.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. ATCC BAA710]
 gi|416526645|ref|ZP_11742550.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. LQC 10]
 gi|416536145|ref|ZP_11748212.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. SARB30]
 gi|416542333|ref|ZP_11751503.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|416552369|ref|ZP_11757085.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 29N]
 gi|416557276|ref|ZP_11759405.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 42N]
 gi|416567935|ref|ZP_11764439.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 4441 H]
 gi|416576681|ref|ZP_11769263.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|416583727|ref|ZP_11773483.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|416595075|ref|ZP_11780889.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|416596600|ref|ZP_11781492.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|416605748|ref|ZP_11787180.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|416614727|ref|ZP_11792979.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|416623391|ref|ZP_11797366.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|416634051|ref|ZP_11802332.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|416639013|ref|ZP_11804312.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|416648495|ref|ZP_11809140.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|416670929|ref|ZP_11820418.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|416673592|ref|ZP_11820915.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|416691340|ref|ZP_11826162.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|416706812|ref|ZP_11832001.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|416713226|ref|ZP_11836868.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|416719443|ref|ZP_11841299.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|416723580|ref|ZP_11844246.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|416734161|ref|ZP_11850816.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|416740081|ref|ZP_11854169.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|416745278|ref|ZP_11857210.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|416757165|ref|ZP_11862995.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|416764393|ref|ZP_11867997.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|416766802|ref|ZP_11869418.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|418485266|ref|ZP_13054250.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 80959-06]
 gi|418490792|ref|ZP_13057328.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035278]
 gi|418493163|ref|ZP_13059631.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035318]
 gi|418498093|ref|ZP_13064508.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035320]
 gi|418504387|ref|ZP_13070745.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035321]
 gi|418507982|ref|ZP_13074290.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035327]
 gi|418525608|ref|ZP_13091588.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008286]
 gi|322614720|gb|EFY11649.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322618826|gb|EFY15714.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623533|gb|EFY20372.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629169|gb|EFY25948.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631889|gb|EFY28643.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637374|gb|EFY34076.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642059|gb|EFY38669.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322647878|gb|EFY44353.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652556|gb|EFY48910.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653282|gb|EFY49615.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660569|gb|EFY56805.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664721|gb|EFY60914.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669226|gb|EFY65376.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670771|gb|EFY66904.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678990|gb|EFY75045.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682018|gb|EFY78043.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322685153|gb|EFY81150.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323192954|gb|EFZ78177.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196964|gb|EFZ82106.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203949|gb|EFZ88966.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323214507|gb|EFZ99258.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223064|gb|EGA07407.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227013|gb|EGA11194.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230169|gb|EGA14289.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233907|gb|EGA17996.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238399|gb|EGA22457.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244087|gb|EGA28096.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246247|gb|EGA30230.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251873|gb|EGA35736.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257870|gb|EGA41549.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261117|gb|EGA44709.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264953|gb|EGA48452.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272516|gb|EGA55923.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|363549150|gb|EHL33507.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. SARB31]
 gi|363554583|gb|EHL38818.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. ATCC BAA710]
 gi|363557697|gb|EHL41902.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. LQC 10]
 gi|363564595|gb|EHL48642.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 29N]
 gi|363565251|gb|EHL49287.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. SARB30]
 gi|363578299|gb|EHL62113.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 4441 H]
 gi|363578790|gb|EHL62592.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 42N]
 gi|366056244|gb|EHN20570.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 80959-06]
 gi|366065079|gb|EHN29274.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035278]
 gi|366065338|gb|EHN29528.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035318]
 gi|366071229|gb|EHN35329.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035321]
 gi|366073870|gb|EHN37934.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035320]
 gi|366080288|gb|EHN44260.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. CT_02035327]
 gi|366829489|gb|EHN56365.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|372206377|gb|EHP19881.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008286]
          Length = 663

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  + Q+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLTQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|402566144|ref|YP_006615489.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia cepacia GG4]
 gi|402247341|gb|AFQ47795.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia cepacia
           GG4]
          Length = 668

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 469/586 (80%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPEYRDTTGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P     +DI MP NT  G++++IFSL++GFA
Sbjct: 547 PPAEYNFAVIPQVRTLDAYADMKARGDGRPNPATIRDIHMPSNTCAGLVVAIFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI + ++  IE+K+
Sbjct: 607 LVWHIWWMAIGGLVGIVATLVIYSSRD-NDGYYIPASKVRKIEEKQ 651


>gi|291326900|ref|ZP_06574119.1| cytochrome o ubiquinol oxidase, subunit I [Providencia rettgeri DSM
           1131]
 gi|291312436|gb|EFE52889.1| cytochrome o ubiquinol oxidase, subunit I [Providencia rettgeri DSM
           1131]
          Length = 672

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/585 (64%), Positives = 467/585 (79%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQ ++     G+L P HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 77  MLFRGFADAIMMRGQQVLASAGQEGFLNPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL +GEFA TGWL YPPLSG+  +PGVGV
Sbjct: 137 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGVGEFAQTGWLAYPPLSGLEYNPGVGV 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N IATII+MR PGM +M MP+F+W ALCTN+LIVAAFP+LT
Sbjct: 197 DYWLWSLQISGIGTLLTGVNFIATIIRMRTPGMSMMKMPVFSWAALCTNVLIVAAFPILT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 257 VTLTLLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVAATFSK 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+VIT++S+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 317 KRLFGYTSLVWATIVITVMSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 377 FTMYQGRIEFKSPMLWTIGFIITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKA+G+ L   WG  +FWFW+IGF++AFMPLYILGFMG+TRR+S   
Sbjct: 437 VVFGCFAGMTYWFPKAYGFTLNEKWGVRAFWFWIIGFFLAFMPLYILGFMGMTRRLSQNI 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D +      +AA G  LIA+GI   +IQ+IVS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 497 DPTYHTMLVVAAGGAALIAIGIACQVIQIIVSIRDRHENRDLTGDPWGGRTLEWATSSPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D+WW +K+      K   +++I MPKNT  G++I+ FSL++GFA++
Sbjct: 557 PFYNFAIEPHVQTRDAWWDLKEKGLAHKKPTSYEEIHMPKNTGAGVIIAAFSLVLGFAMI 616

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L II F   ++  I  +F+   +YY+   EI  IE K   
Sbjct: 617 WHIWWLAIIGFGGMIVTWIAKSFDEDVDYYVPVAEIEEIENKHFE 661


>gi|254229391|ref|ZP_04922807.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio sp. Ex25]
 gi|262396849|ref|YP_003288702.1| cytochrome O ubiquinol oxidase subunit I [Vibrio sp. Ex25]
 gi|151938082|gb|EDN56924.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio sp. Ex25]
 gi|262340443|gb|ACY54237.1| cytochrome O ubiquinol oxidase subunit I [Vibrio sp. Ex25]
          Length = 678

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/586 (62%), Positives = 465/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEGGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATVVIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    IAA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLSIAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++  F   K+ +++ I MPKNT  GI +S +SL+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPTKEVEYERIHMPKNTATGIYVSAWSLLFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            ++W++W L   S +  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 606 GMIWYIWWLAAASLVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|407071771|ref|ZP_11102609.1| cytochrome o ubiquinol oxidase subunit I [Vibrio cyclitrophicus
           ZF14]
          Length = 695

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 462/586 (78%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSAAGETGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGIILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATV IT+L+++VWLHHFFTMGSGANVNAFFGI TM+ISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVAITILAFVVWLHHFFTMGSGANVNAFFGIATMVISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFILHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ L   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAIGYWFPKATGFTLNELWGKRAFYCWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT +IAMG++   +Q+ VS R R    D+TGDPW GRT EW+TSS
Sbjct: 486 DINPEFFPLLAVAAAGTGVIAMGVVCQFVQIYVSVRDRDQNRDLTGDPWGGRTFEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P   + DS+WY K++    P  +++++ I MPKNT  GI +S ++L  GF
Sbjct: 546 PPPFYNFAKLPKGDEIDSFWYQKQSGEFNPTQEEEYERIHMPKNTPTGIYVSAWALAFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|113867653|ref|YP_726142.1| bo3-type quinol oxidase, subunit I [Ralstonia eutropha H16]
 gi|113526429|emb|CAJ92774.1| bo3-type quinol oxidase, subunit I [Ralstonia eutropha H16]
          Length = 658

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/583 (62%), Positives = 457/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI++G   GYLPP HY+QIFTAHGVIMIFFVA PLV G++N IV
Sbjct: 68  MLLRGFADAIMMRAQQAIAYGDGAGYLPPHHYDQIFTAHGVIMIFFVATPLVLGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWM++ GA+LVM+S+F+G+FA+TGW+ YPPLS +  SP  GV
Sbjct: 128 PLQIGARDVAFPFVNSLSFWMSAMGAVLVMLSMFVGDFAATGWVAYPPLSELGYSPTPGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT L+GIN I TI++MRAPG+ LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLTGINFIVTILRMRAPGLNLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+G HFFTN+LGGN MMYVNLIWIWGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLGMHFFTNELGGNAMMYVNLIWIWGHPEVYVLILPAFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    +WTIGFM+TF +GGM GV+LA+P A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHTSTMWTIGFMVTFAVGGMTGVLLAIPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++ I +WFPK FG+ L  FWGK SFW WL GF++AFMPLY+LGF G+TRRM+H+ 
Sbjct: 428 VLFGCLAAITFWFPKVFGFTLNEFWGKVSFWCWLAGFFLAFMPLYVLGFKGMTRRMNHYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           ++    +  +A  G  +I  GIL+ ++Q  VS R R    D+TGDPW+GR+LEWST+SP 
Sbjct: 488 NVDWHPYLVVALVGAFVIGAGILAMLVQFAVSIRDRKQNRDLTGDPWDGRSLEWSTASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   +  W  K+    + +  +++DI MP+NT+ G ++S F L+  FALV
Sbjct: 548 PFYNFAHVPHITSLEQHWDDKEAGRAWRQPARYEDIHMPRNTSAGFIVSAFGLLCCFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WHMWL+ +   +  +   +  +++   +YY+ + E+  IE+ R
Sbjct: 608 WHMWLVAVAGLVGAIATFVVRSYDRDVDYYVPAAEVERIERAR 650


>gi|429099377|ref|ZP_19161483.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter dublinensis
           582]
 gi|426285717|emb|CCJ87596.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter dublinensis
           582]
          Length = 592

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/585 (63%), Positives = 456/585 (77%), Gaps = 9/585 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+M   +         G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 5   MLVRGFADAIMASGEA--------GFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 56

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 57  PLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 116

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 117 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 176

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 177 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 236

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 237 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 296

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 297 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 356

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 357 VVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 416

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  ++Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 417 DPMFQPLMIVAEIGALLIACGILCIVLQIYVSVRDRHLNRDLTGDPWGGRTLEWATSSPP 476

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MP+N+  GI I  FS I GFA++
Sbjct: 477 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPRNSAAGIFIGAFSTIFGFAMI 536

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 537 WHIWWLAILGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 581


>gi|433659744|ref|YP_007300603.1| Cytochrome O ubiquinol oxidase subunit I [Vibrio parahaemolyticus
           BB22OP]
 gi|432511131|gb|AGB11948.1| Cytochrome O ubiquinol oxidase subunit I [Vibrio parahaemolyticus
           BB22OP]
          Length = 678

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 464/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILVLPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W++GF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIVGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLAVAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++    P  + +++ I MPKNT  GI +S ++L+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPMKEVEYERIHMPKNTATGIYVSAWALVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|161615368|ref|YP_001589333.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161364732|gb|ABX68500.1| hypothetical protein SPAB_03139 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 663

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 465/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+ L   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 650


>gi|28900483|ref|NP_800138.1| cytochrome o ubiquinol oxidase subunit I [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260365636|ref|ZP_05778157.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           K5030]
 gi|260877436|ref|ZP_05889791.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           AN-5034]
 gi|260898917|ref|ZP_05907358.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           Peru-466]
 gi|260901249|ref|ZP_05909644.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           AQ4037]
 gi|28808863|dbj|BAC61971.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308089189|gb|EFO38884.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           Peru-466]
 gi|308090600|gb|EFO40295.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           AN-5034]
 gi|308106799|gb|EFO44339.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           AQ4037]
 gi|308111435|gb|EFO48975.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           K5030]
          Length = 678

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 464/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILVLPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W++GF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIVGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLAVAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++    P  + +++ I MPKNT  GI +S ++L+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPMKEVEYERIHMPKNTATGIYVSAWALVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|417322281|ref|ZP_12108815.1| cytochrome o ubiquinol oxidase subunit I [Vibrio parahaemolyticus
           10329]
 gi|328470435|gb|EGF41346.1| cytochrome o ubiquinol oxidase subunit I [Vibrio parahaemolyticus
           10329]
          Length = 678

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 464/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILVLPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITVLAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W++GF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIVGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLAVAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++    P  + +++ I MPKNT  GI +S ++L+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPMKEVEYERIHMPKNTATGIYVSAWALVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|153837557|ref|ZP_01990224.1| cytOchrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           AQ3810]
 gi|149749054|gb|EDM59865.1| cytOchrome o ubiquinol oxidase, subunit I [Vibrio parahaemolyticus
           AQ3810]
          Length = 678

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 464/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILVLPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITVLAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W++GF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIVGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLAVAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++    P  + +++ I MPKNT  GI +S ++L+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPMKEVEYERIHMPKNTATGIYVSAWALVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   S +  ++  I +++N   +YY+  EEI  IE  R
Sbjct: 606 AMIWYIWWLAAASLVGIVVTCIQHSYNDDVDYYVEVEEIKAIEAAR 651


>gi|260427384|ref|ZP_05781363.1| cytOchrome o ubiquinol oxidase, subunit I [Citreicella sp. SE45]
 gi|260421876|gb|EEX15127.1| cytOchrome o ubiquinol oxidase, subunit I [Citreicella sp. SE45]
          Length = 665

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/581 (65%), Positives = 462/581 (79%), Gaps = 2/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQA++ G S GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++N+++
Sbjct: 83  MMVRGFADALMMRAQQAMAAGGSEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGVMNYVM 142

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  GA+LV +SLFIGEFA  GWL +PPLSG   S G G+
Sbjct: 143 PLQIGARDVAFPFLNNFSFWMTVSGALLVNLSLFIGEFARVGWLAFPPLSGANYSHGPGM 202

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQIAG+GT LSGIN+IAT++KMRAPGMKLM+MPIF+WT+L TN+LIVAAFPVLT
Sbjct: 203 DYYLWALQIAGVGTTLSGINLIATMLKMRAPGMKLMDMPIFSWTSLITNVLIVAAFPVLT 262

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+   FFTND GGN MMYVNLIWIWGHPEVYIL++P FGI SE+VSTFS 
Sbjct: 263 ATLALLTLDRYMDFRFFTNDFGGNAMMYVNLIWIWGHPEVYILIIPCFGIISEIVSTFSG 322

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K +FGY +MV AT  I +LS+IVWLHHFFTMGSGA+VN FFGI TMII++PTG KIFNWL
Sbjct: 323 KPIFGYRTMVMATACIMVLSFIVWLHHFFTMGSGADVNTFFGIATMIIAVPTGVKIFNWL 382

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RFEVP+LWTIGF++TF IGGM GV+LAVP  +F LHN+LFL+AHFHNVIIGG
Sbjct: 383 FTMYKGRVRFEVPMLWTIGFLVTFTIGGMTGVLLAVPPVDFQLHNTLFLIAHFHNVIIGG 442

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +G+ YW+PK FG+KL   WGK SFWFW +GFY AFMPLY LG MGVTRRM+ + 
Sbjct: 443 VVFAIYAGVTYWWPKVFGFKLNDTWGKRSFWFWFVGFYFAFMPLYALGLMGVTRRMNMYP 502

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + Q +F +AAFG +LIA+GI S  I   VS R R  L  +  DPW+ RTLEW+T SPP
Sbjct: 503 DAAWQPYFIVAAFGAVLIALGIASTFIGFYVSIRDRKAL-AVGSDPWDARTLEWATQSPP 561

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNF     +   +++W+MKK  FK+   K+  I MPK T  G+LIS  +L+ GFA+VW
Sbjct: 562 APYNFPEDIEVVGREAFWHMKKTGFKW-SGKYAPIHMPKGTATGVLISAVALVFGFAMVW 620

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           ++W L I+SF+  L I I +TFNY R+YYI S+ +T  E K
Sbjct: 621 YIWWLAILSFVGMLAIGIGHTFNYNRDYYIPSDVVTATEAK 661


>gi|260778348|ref|ZP_05887241.1| cytochrome O ubiquinol oxidase subunit I [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606361|gb|EEX32646.1| cytochrome O ubiquinol oxidase subunit I [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 678

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/586 (62%), Positives = 466/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFIVGVILTNMSLGLGEFGRTGWLAYPPLSGIDASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGFHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATVVIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W++GF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNEAWGKRAFYLWIVGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT +IAMG++   IQ+ VS R R    D+TGDPW GRT EW+TSS
Sbjct: 486 DINPEYFPLLAVAAAGTAVIAMGVICQFIQIYVSIRDREQNRDLTGDPWGGRTFEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P   + D++WY K++ +F   K+ +++ I MPKNT  GI +S ++L+ GF
Sbjct: 546 PPPFYNFAHLPKGDELDAFWYQKQSGDFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           A++W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 606 AMIWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|451970414|ref|ZP_21923640.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio alginolyticus
           E0666]
 gi|451933500|gb|EMD81168.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio alginolyticus
           E0666]
          Length = 678

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/586 (62%), Positives = 465/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLVRGFADAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+ATVVIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATVVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFTVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFYLWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    IAA GT++IA+G+LS  IQ+ VS R R    D+TGDPW GRTLEW+TSS
Sbjct: 486 DINPEYFPLLSIAAAGTVVIALGVLSQFIQIYVSIRDREQNRDLTGDPWGGRTLEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D++WY K++  F   K+ +++ I MPKNT  GI +S +SL+ GF
Sbjct: 546 PPPFYNFAHLPKGDVLDAFWYQKQSGEFDPTKEVEYERIHMPKNTATGIYVSAWSLLFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            ++W++W L   S +  ++  I +++N   +YY+  +EI  IE +R
Sbjct: 606 GMIWYIWWLAAASLVGIIVTCIQHSYNDDVDYYVEVDEIKAIETER 651


>gi|115352157|ref|YP_773996.1| cytochrome-c oxidase [Burkholderia ambifaria AMMD]
 gi|115282145|gb|ABI87662.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           ambifaria AMMD]
          Length = 668

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/586 (63%), Positives = 469/586 (80%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA +P +   D++  MK      P     +DI MP NT  G++I++FSL++GFA
Sbjct: 547 PPADYNFAVLPHVRTLDAYADMKARGDGRPNPATIRDIHMPSNTCAGLVIAVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI + ++  IE+K+
Sbjct: 607 LVWHIWWMAIGGLVGIIATLVIYSSRD-NDGYYIPASKVRKIEEKQ 651


>gi|172061021|ref|YP_001808673.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia ambifaria
           MC40-6]
 gi|171993538|gb|ACB64457.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia ambifaria
           MC40-6]
          Length = 668

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/586 (63%), Positives = 469/586 (80%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA +P +   D++  MK      P     +DI MP NT  G++I++FSL++GFA
Sbjct: 547 PPADYNFAVLPQVRTLDAYADMKARGDGRPNPATIRDIHMPSNTCAGLVIAVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +V+Y++ +    YYI + ++  IE+K+
Sbjct: 607 LVWHIWWMAIGGLVGIIATLVVYSSRD-NDGYYIPASKVRRIEEKQ 651


>gi|53719986|ref|YP_108972.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei K96243]
 gi|386861046|ref|YP_006273995.1| ubiquinol oxidase subunit I [Burkholderia pseudomallei 1026b]
 gi|418380438|ref|ZP_12966409.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 354a]
 gi|418533516|ref|ZP_13099383.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 1026a]
 gi|418552796|ref|ZP_13117645.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 354e]
 gi|52210400|emb|CAH36381.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei K96243]
 gi|385361551|gb|EIF67436.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 1026a]
 gi|385372570|gb|EIF77675.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 354e]
 gi|385377365|gb|EIF81949.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 354a]
 gi|385658174|gb|AFI65597.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 1026b]
          Length = 668

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/583 (62%), Positives = 465/583 (79%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVGLFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGVALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP +H  D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPVYNFAVIPTVHALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LVWH+W L I +F+  + +V+  +      YYI+++ +  IE+
Sbjct: 607 LVWHIWWLAITAFVGIVAMVVLYSAGENDGYYIAADTVREIEE 649


>gi|260769716|ref|ZP_05878649.1| cytochrome O ubiquinol oxidase subunit I [Vibrio furnissii CIP
           102972]
 gi|375133113|ref|YP_005049521.1| cytochrome o ubiquinol oxidase subunit I [Vibrio furnissii NCTC
           11218]
 gi|260615054|gb|EEX40240.1| cytochrome O ubiquinol oxidase subunit I [Vibrio furnissii CIP
           102972]
 gi|315182288|gb|ADT89201.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio furnissii NCTC
           11218]
          Length = 662

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/584 (62%), Positives = 457/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLP  HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 51  MLIRGFADAVMMRSQQLLSSAGEAGYLPQHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 111 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLAVGEFGRTGWLAYPPLSGIDASPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M LM MP+FTW + C NILI+ +FP+LT
Sbjct: 171 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPLMKMPVFTWASFCANILIIISFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 231 VTIALLTLDRYLGMHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEVTATFSR 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L++IVWLHHFFTMG GANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 291 KKLFGYTSLVWATIVITVLAFIVWLHHFFTMGGGANVNAFFGIATMIISIPTGVKIFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+F  P++WT+GF+I+F IGGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 351 FTMYRGRIQFTTPMMWTVGFLISFSIGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ L   WGK +FW WL GF +AF+PLY LGFMG+TRR+S   
Sbjct: 411 VVFGCFAAITYWFPKATGFTLNETWGKRAFWCWLTGFILAFLPLYALGFMGMTRRISQNI 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D     +  +AAFGT ++A+G+L   IQ+ VS R R   +D+TGDPW GRTLEW+TSSPP
Sbjct: 471 DPEFFPFLAVAAFGTAIVALGVLCQFIQIYVSVRDRKQNLDLTGDPWGGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P   + D++WY K +      K+ ++Q I MPKNT  G+ +S ++LI GFA+
Sbjct: 531 PFYNFAVLPKGDELDAFWYQKERGEHDLNKEVEYQPIHMPKNTPTGMYVSAWALIFGFAM 590

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L  I FI  ++  I ++FN   +YY+  +EI  IE+  
Sbjct: 591 IWYIWWLAAIGFIGIVVTSIKHSFNEDLDYYVQVDEIKAIEEAH 634


>gi|262372202|ref|ZP_06065481.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter junii
           SH205]
 gi|262312227|gb|EEY93312.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter junii
           SH205]
          Length = 660

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 472/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 67  MLLRGFADAIMMRLQLFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 127 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMASLALGEFAATGWMAYPPLSGIEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 187 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 247 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 307 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRITYTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW IGFY AFMPLYILGFMG+TRR++ ++
Sbjct: 427 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFIGFYFAFMPLYILGFMGMTRRLNTYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI  F++Q+IV + +RH  +D TGDPW+GRT EW+TSSP 
Sbjct: 487 NPEWDPYLAIALFGAVLIAIGIACFLMQIIVGFLQRHQNMDYTGDPWDGRTFEWATSSPA 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +W  K+N   + +D K++DI MP N   G +I++F  ++GFAL+
Sbjct: 547 PFYNFAHLPAADGIDRFWTDKENGVAYARDTKYEDIHMPTNRAAGFIIAMFITVLGFALI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+ +++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 607 WHIWWLVVVSFVASVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 652


>gi|126441513|ref|YP_001059739.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 668]
 gi|126451952|ref|YP_001067024.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106a]
 gi|134277338|ref|ZP_01764053.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 305]
 gi|217420686|ref|ZP_03452191.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei 576]
 gi|237813133|ref|YP_002897584.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei MSHR346]
 gi|242316439|ref|ZP_04815455.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106b]
 gi|254184267|ref|ZP_04890857.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1655]
 gi|403519446|ref|YP_006653580.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei BPC006]
 gi|126221006|gb|ABN84512.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei 668]
 gi|126225594|gb|ABN89134.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106a]
 gi|134250988|gb|EBA51067.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 305]
 gi|184214798|gb|EDU11841.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1655]
 gi|217396098|gb|EEC36115.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei 576]
 gi|237504145|gb|ACQ96463.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           pseudomallei MSHR346]
 gi|242139678|gb|EES26080.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 1106b]
 gi|403075089|gb|AFR16669.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei BPC006]
          Length = 668

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/583 (62%), Positives = 464/583 (79%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVGLFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+S
Sbjct: 487 NPAWHPWLIVAACGVALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP +H  D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFA
Sbjct: 547 PPPVYNFAVIPTVHALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LVWH+W L I +F+  +  V+  +      YYI+++ +  IE+
Sbjct: 607 LVWHIWWLAIAAFVGIVATVVLYSAGENDGYYIAADTVREIEE 649


>gi|170701547|ref|ZP_02892497.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia ambifaria
           IOP40-10]
 gi|170133541|gb|EDT01919.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia ambifaria
           IOP40-10]
          Length = 668

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/586 (63%), Positives = 469/586 (80%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA +P +   D++  MK      P     +DI MP NT  G++I++FSL++GFA
Sbjct: 547 PPADYNFAVLPHVRTLDAYADMKARGDGRPNPATIRDIHMPSNTCAGLVIAVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI + ++  IE+K+
Sbjct: 607 LVWHIWWMAIGGLVGIVATLVIYSSRD-NDGYYIPASKVRKIEEKQ 651


>gi|70732060|ref|YP_261816.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas protegens
           Pf-5]
 gi|68346359|gb|AAY93965.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas protegens
           Pf-5]
          Length = 657

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 458/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++     GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVAGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVAGAALVNISLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTW +LCT +LI+AAFP+LT
Sbjct: 188 DYYIWALQISGIGTLLTGVNFFVTILKMRTTGMTLFKMPVFTWNSLCTAVLILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+G HFFTN+ GGN MMYVNLIW WGHPEVYIL+LP FG+FSE+ +TFSS
Sbjct: 248 ATLLMLSLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+G NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYVSLVWATIAITILSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RF  P+LWT+GF++TF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVRFATPMLWTMGFIVTFSIGGMTGVLLAVPGADFMLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G+ YWFPKAFG+ L    G+ SFW WL+GFY AFMP Y+LGFMG+TRR++HF+
Sbjct: 428 AVFGYMAGLTYWFPKAFGFTLNDRLGRLSFWCWLVGFYFAFMPSYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I  G+   ++QL VS R R    D +GDPW+GRTLEW+T+SPP
Sbjct: 488 NPEWRPWLMLELIGVGIILCGVTCQLLQLWVSVRDRRANRDRSGDPWDGRTLEWATTSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA  P++   D++W MK +      +  ++ I MP+NT+ G+++S F+L+  FALV
Sbjct: 548 PLYNFAEQPVVDDLDAYWGMKERGTSTLNRTDYRAIHMPRNTSAGLVMSAFALVCSFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L + S   T++ ++  + +   +Y+I ++E+  IEK R+
Sbjct: 608 WHIWWLALASLAATMVALVVRSNDEDTDYFIPADEVARIEKARL 651


>gi|171318686|ref|ZP_02907830.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia ambifaria
           MEX-5]
 gi|171096121|gb|EDT41046.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia ambifaria
           MEX-5]
          Length = 668

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/586 (63%), Positives = 469/586 (80%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TFS 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA +P +   D++  MK      P     +DI MP NT  G++I++FSL++GFA
Sbjct: 547 PPADYNFAVLPQVRTLDAYADMKARGDGRPNPATIRDIHMPSNTCAGLVIAVFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI + ++  IE+K+
Sbjct: 607 LVWHIWWMAIGGLVGIVATLVIYSSRD-NDGYYIPASKVRKIEEKQ 651


>gi|392542710|ref|ZP_10289847.1| cytochrome-c oxidase [Pseudoalteromonas piscicida JCM 20779]
          Length = 658

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 449/584 (76%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 68  MLMRGFADAVMMRTQLAMATSGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAIL+ +SL  GEFA TGW+ YPPLS ++ SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLTAGGAILINLSLAFGEFAKTGWVAYPPLSELSFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGM LM MPIFTWT    NIL+ A+FP+LT
Sbjct: 188 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMTLMKMPIFTWTCTWANILVAASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYIL+LP FGIFSE++STF+ 
Sbjct: 248 AVLAMLTLDRYMDFHFFTNEAGGNAMMYINLFWAWGHPEVYILILPAFGIFSEIISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 308 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRLRITVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPK  GYKL+  WGK SFW WL+GF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 428 AVFGYLAGFAYWFPKVMGYKLDERWGKASFWCWLVGFFVAFMPLYVLGFLGMTRRLNHTN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                IW  IA  G  +I  GI+  ++QL+VSY+ R  L D TGDPWNG TLEWST SPP
Sbjct: 488 TPEWNIWLYIACIGAFIIMFGIIFQVVQLVVSYKNREQLQDTTGDPWNGHTLEWSTDSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P++   D+W  MK+    + K  ++Q I MPKNT  G+LIS    +  FA++
Sbjct: 548 QYYNFAKTPVVDDIDAWTEMKEQGQAYQKPAQYQPIHMPKNTPAGVLISASLTVFCFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  + F+  + + I   +    +YY+  +EI  IE   +
Sbjct: 608 WHIWWLAAVGFVSAIAVFIKRCYTRDVDYYVQVDEIEQIESAHL 651


>gi|421870256|ref|ZP_16301891.1| Cytochrome O ubiquinol oxidase subunit I [Burkholderia cenocepacia
           H111]
 gi|358069782|emb|CCE52769.1| Cytochrome O ubiquinol oxidase subunit I [Burkholderia cenocepacia
           H111]
          Length = 668

 Score =  770 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/586 (63%), Positives = 466/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TF+ 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R RH     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRHLPEYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P     +DI MP NT  G++I+IFSL++GFA
Sbjct: 547 PPADYNFAVIPQVRTLDAYADMKARGEGRPNPAAIRDIHMPSNTCAGLVIAIFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   I I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWMAIGGLIGIIATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|206560507|ref|YP_002231271.1| ubiquinol oxidase polypeptide I [Burkholderia cenocepacia J2315]
 gi|444358615|ref|ZP_21160005.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia cenocepacia
           BC7]
 gi|444366631|ref|ZP_21166653.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia cenocepacia
           K56-2Valvano]
 gi|198036548|emb|CAR52445.1| ubiquinol oxidase polypeptide I [Burkholderia cenocepacia J2315]
 gi|443603659|gb|ELT71650.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia cenocepacia
           BC7]
 gi|443604245|gb|ELT72198.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia cenocepacia
           K56-2Valvano]
          Length = 668

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/586 (63%), Positives = 466/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N +V
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TF+ 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R RH     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRHLPEYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P     +DI MP NT  G++I+IFSL++GFA
Sbjct: 547 PPADYNFAVIPQVRTLDAYADMKARGEGRPNPAAIRDIHMPSNTCAGLVIAIFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI +  +   E K+
Sbjct: 607 LVWHIWWMAIGGLVGIIATLVIYSSRD-NDGYYIPASTVRKTEDKQ 651


>gi|56414402|ref|YP_151477.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363322|ref|YP_002142959.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128659|gb|AAV78165.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094799|emb|CAR60332.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 663

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 464/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKA G+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKALGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H+ D++W MK+    + +  ++ +I MPKN+  GI+I+ F+ + GFA++
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYGEIHMPKNSGAGIVIAAFATVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 WHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLESQH 650


>gi|311108450|ref|YP_003981303.1| cytochrome o ubiquinol oxidase subunit I 1 [Achromobacter
           xylosoxidans A8]
 gi|310763139|gb|ADP18588.1| cytochrome o ubiquinol oxidase, subunit I 1 [Achromobacter
           xylosoxidans A8]
          Length = 658

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/583 (62%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+MISLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVALMMISLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN I TI++MRAPGM LM MPIFTWT+L TN+LIVAAFPVL 
Sbjct: 188 DYYIWALQISGLGTTLSGINFIVTILRMRAPGMSLMKMPIFTWTSLVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+GTHFFTND+GGN+MMYVNLIWIWGHPEVYILVLP FG++SE+V+TF+ 
Sbjct: 248 ATLALLTMDRYLGTHFFTNDMGGNVMMYVNLIWIWGHPEVYILVLPAFGVYSEIVATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAKIFNWL
Sbjct: 308 KTLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R   P+LWT+GFMI FVIGGM GV+LA+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRITTPVLWTLGFMIVFVIGGMTGVMLAIPGVSFVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+ L    G+ SF+ W +GF++AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAGMTYWFPKAFGFTLNERLGRYSFYCWFVGFFMAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R+R    D+TGDPW+GRTLEW+ SSP 
Sbjct: 488 NPEWQPYLLVALAGAALIMLGIWFLLQQVFVSVRQRKQNQDVTGDPWDGRTLEWAISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W  K+N   + +  K++DI MP+NT +G++I  F L+M FAL+
Sbjct: 548 PFYNFAHVPHVDSLDQFWEDKQNGKAYKRPAKYEDIHMPRNTAMGVVIGAFGLVMCFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L+I+ F+  +   I   ++   +Y++ + E+  IE   
Sbjct: 608 WHIWWLSIVGFVGMVGSFIVRAYDRDVDYWVPAAEVERIENAH 650


>gi|372270276|ref|ZP_09506324.1| cytochrome-c oxidase [Marinobacterium stanieri S30]
          Length = 662

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/584 (61%), Positives = 449/584 (76%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVATGGAEGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P+QIGARDVAFPFLNNLSFW+   GA+LV ISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PMQIGARDVAFPFLNNLSFWLAVSGALLVNISLGVGEFAKTGWVAYPPLSGINYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N +AT+IKMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGIGTTLTGVNFLATVIKMRTPGMKLMHMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY+  HFFTNDLGGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 248 GALAMLTLDRYLDFHFFTNDLGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV A+  I++L +IVWLHHFFTMGS ANVNAFFG+TTMII++PTG K+FNWL
Sbjct: 308 KRLFGYKSMVLASGAISVLGFIVWLHHFFTMGSSANVNAFFGVTTMIIAVPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RF  P+LWT+GFM+TF IGGM GV+L+VP A+++LHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRLRFTTPVLWTLGFMVTFTIGGMTGVLLSVPGADYVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA GY L+  WGK +FW W IGFY AFMPLY+LGF+G+TRR++H +
Sbjct: 428 AVFGYLAGFAYWFPKAMGYTLDEKWGKRAFWCWQIGFYCAFMPLYVLGFLGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IA  G  +IA+GI   +IQL VSYR R    D+TGDPWNG TLEW+++SPP
Sbjct: 488 NPDWNIWLYIACVGAFIIALGIACQLIQLYVSYRNREQNRDLTGDPWNGHTLEWASASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P +   D++  MK+    + + D +  I MPKNT +G ++ +     GF  V
Sbjct: 548 QFYNFAVEPKVDDIDAFTEMKERGHAYHRPDSYAPIHMPKNTGVGFVMGMLLTAAGFGAV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I + + TL   +   ++   +YY+  +EI  IE   +
Sbjct: 608 WHIWWLVIAALLGTLAAFLVRCYDNDVDYYVQPDEIERIEDAHL 651


>gi|78066844|ref|YP_369613.1| cytochrome-c oxidase [Burkholderia sp. 383]
 gi|77967589|gb|ABB08969.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           sp. 383]
          Length = 668

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/586 (63%), Positives = 466/586 (79%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+S+    GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALSYNGP-GYLPPHHYDQVFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINVSLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVISTFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK +FWFW IGFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKAAFWFWQIGFYVAFVPLYVLGFMGMTRRINHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPEYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P     +DI MP NT  G++++IFSL++GFA
Sbjct: 547 PPADYNFAVIPQVRTLDAYADMKARGEGRPNPAAIRDIHMPSNTCAGLVVAIFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W + I   + I   +VIY++ +    YYI +  +  IE K+
Sbjct: 607 LVWHIWWMAIGGLVGIVATLVIYSSRD-NDGYYIPASTVRKIEDKQ 651


>gi|238899043|ref|YP_002924725.1| cytochrome o ubiquinol oxidase, subunit I -2 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466803|gb|ACQ68577.1| cytochrome o ubiquinol oxidase, subunit I -2 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 663

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/583 (63%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA++MR QQA+S     G+L   HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLLRGFADAILMRSQQALSSAGEAGFLTAHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN+LSFW+   G +L+ +SL IGEFA TGWL YPPLSG   SP VGV
Sbjct: 128 PLQIGARDMAFPFLNSLSFWLFVAGVVLINLSLGIGEFAQTGWLAYPPLSGKEYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GTLL+GIN+  TI+KMRAPGM +M MP+FTWT+ C+NILI+ AFP+LT
Sbjct: 188 DYWIWSLQISGMGTLLTGINLFTTILKMRAPGMSMMKMPVFTWTSFCSNILIIIAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTN+LGGN+MMY+NL+W WGHPEVYILVLPVFGIFSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNELGGNMMMYINLVWAWGHPEVYILVLPVFGIFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLF Y+S+V+AT+VIT L++IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KRLFEYTSLVWATIVITFLAFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWT+GF++TF +GGM GV+LAVPAANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIHFNSAMLWTLGFIVTFSVGGMTGVLLAVPAANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFWLIGF+VAFMPLY+LG MG+TRR+S   
Sbjct: 428 VVFGCFAGLTYWFPKAFGFTLNEKWGIRAFWFWLIGFFVAFMPLYVLGLMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G +LIA GIL  +IQ++VS R R    D+TGDPW GRTLEW+TSSP 
Sbjct: 488 NPQFHPLLMVAAGGAVLIAFGILCQLIQIVVSIRDREKNRDLTGDPWGGRTLEWATSSPS 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P I   D+++ MK+    +P+ +K+ +I M KN+  GI+I+ FS+I GFA++
Sbjct: 548 AFYNFAVVPEIKSRDAFFDMKEKGEAYPRPEKYAEIHMSKNSATGIIIAAFSVIFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+  I      I  +F+   +YY+   +I  IE + 
Sbjct: 608 WHIWWLAIVGVIGMGATWIAKSFDQDVDYYVPVSDIERIENEH 650


>gi|152987069|ref|YP_001349426.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PA7]
 gi|150962227|gb|ABR84252.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas aeruginosa
           PA7]
          Length = 658

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/585 (62%), Positives = 455/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 68  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRAPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYKGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI S +IQL VS R R  L D +GDPW GRTLEW+TSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLIFCGIASQLIQLFVSVRNRKQLADASGDPWEGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 548 PFYNFAELPKVQDVDAFHDMKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  + F+  +   I  ++N   +YY+  EEI  IE  R +
Sbjct: 608 WHIWWLMAVGFVGMIGSFIVRSYNQDVDYYVQPEEIEKIESARFQ 652


>gi|380510661|ref|ZP_09854068.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas sacchari
           NCPPB 4393]
          Length = 666

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/586 (65%), Positives = 458/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQAI+ G + G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQAIAHGGNEGIFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALVNISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQISGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++TFS 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITFVIGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTAPVLWTIGFIITFVIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF++AFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIIGFFIAFMPLYVLGFMGMTRRMNSYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I  GI   ++Q+  S  KR   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLMVAAAGAAIIGTGIFLNLVQIGYSIWKRKDNLDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K     +P+  K++ I MP+NT  G+ I  FS++MGF L 
Sbjct: 548 PFYNFAVLPHIDDRDQFWEDKLKGKGWPRPAKYEPIHMPRNTAAGLWIGAFSVVMGFGLT 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W +  I  +  +   I  TF+   +Y++ +EE+  IE  R  L
Sbjct: 608 WHIWWMAAIGLVGMIGSFIARTFDDDIDYWVPAEEVERIENARFAL 653


>gi|429212836|ref|ZP_19204001.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. M1]
 gi|428157318|gb|EKX03866.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. M1]
          Length = 658

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/585 (62%), Positives = 460/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ G+LPPEHY+QIFTAHG+IMI F+AMP +TG++N  V
Sbjct: 68  MLLRGFADAIMMRGQLALAEGANHGFLPPEHYDQIFTAHGMIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMR PGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRTPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYTSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RF+ PILWT+GFMITF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRFDTPILWTLGFMITFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+KL+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFVFWFPKAFGFKLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GILS +IQL VS + R  L D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLILFGILSQLIQLFVSIKNRKQLADVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P++   D++  MK+N   +     ++ I MPKNT  G  I++F+ I GFA +
Sbjct: 548 PYYNFAELPVVRDVDAFHEMKQNGRAYQAPASYKPIHMPKNTAAGFSIALFAFIFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  I F+  +  VI  ++    +YY+  +EI  IE +  +
Sbjct: 608 WHIWWLAGIGFVGMIASVIVRSYVTDLDYYVQPDEIERIENRHFQ 652


>gi|424790853|ref|ZP_18217359.1| Cytochrome O ubiquinol oxidase subunit I [Xanthomonas translucens
           pv. graminis ART-Xtg29]
 gi|422797849|gb|EKU26044.1| Cytochrome O ubiquinol oxidase subunit I [Xanthomonas translucens
           pv. graminis ART-Xtg29]
          Length = 666

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/586 (64%), Positives = 458/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G + G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQAMAHGGNEGIFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALVNISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN   TI++MR PGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQISGLGTLLTGINFFVTILRMRTPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++TFSS
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+R   P+LWTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVRMTAPVLWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W++GF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNETLGKASFWCWIVGFFVAFMPLYVLGFMGMTRRMNSYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I  GI   ++Q+  S  KR   +D+TGDPW GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLMVAAAGAAIIGCGIFLNLVQIGYSIWKRKDNLDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K     + +  K++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWEDKLKGKGWTRPAKYEPIHMPRNTAAGVWIGAFSVVLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + II  +  +   I  TF+   +Y++ +EE+  IE  R  L
Sbjct: 608 WHIWWMAIIGLVGMIGSFIARTFDDDVDYWVPAEEVERIENARFAL 653


>gi|429102744|ref|ZP_19164718.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter turicensis
           564]
 gi|426289393|emb|CCJ90831.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter turicensis
           564]
          Length = 592

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/585 (63%), Positives = 454/585 (77%), Gaps = 13/585 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+              G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 9   MLVRGFADAI------------EAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 56

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 57  PLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWVAYPPLSGIEYSPGVGV 116

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LCTN+LI+ +FP+LT
Sbjct: 117 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCTNVLIIVSFPILT 176

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYILVLPVFG+FSE+ STFS 
Sbjct: 177 VTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYILVLPVFGVFSEITSTFSK 236

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 237 KRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAIPTGVKIFNWL 296

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 297 FTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 356

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FMPLY +GFMG+TRR+S   
Sbjct: 357 VVFGCFAGMSYWWPKAFGYKMNESWGIRAFWFWIIGFFVTFMPLYAMGFMGMTRRVSQNI 416

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+TGDPW GRTLEW+TSSPP
Sbjct: 417 DPMFQPLMIVAEIGALLIACGILCIILQIYVSVRDRHLNRDLTGDPWGGRTLEWATSSPP 476

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH+ D++W MK     + +   +++I MPKN+  GI I  FS I GFA++
Sbjct: 477 PFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPKNSAAGIFIGAFSTIFGFAMI 536

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F   +I  I  +F+   +YY+    +  +E +   
Sbjct: 537 WHIWWLAILGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQHFE 581


>gi|338997462|ref|ZP_08636159.1| cytochrome o ubiquinol oxidase subunit I [Halomonas sp. TD01]
 gi|338765640|gb|EGP20575.1| cytochrome o ubiquinol oxidase subunit I [Halomonas sp. TD01]
          Length = 675

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 458/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + GYLPPEHY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAMAAGGAAGYLPPEHYDQIFTAHGVIMIFFVAMPMVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+ +  AILV ISL +GEFA TGWL Y PLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLFAVSAILVNISLVVGEFAKTGWLAYAPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+GIGT L+GIN   TI+KMR  GM +  MPIFTWT+LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQISGIGTTLTGINFFVTILKMRTKGMTMFRMPIFTWTSLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY G HFFTND GGN+MMYVNLIW WGHPEVYIL+LP FG+FSEV++TF+ 
Sbjct: 248 ATIALLTLDRYFGMHFFTNDFGGNMMMYVNLIWAWGHPEVYILILPAFGVFSEVIATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MV+ATV ITLLS+IVWLHHFFTMG+GANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KRLFGYTTMVWATVAITLLSFIVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT++RG +    P+LWT+GF+ITF +GGM GV+LA+PAANF+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIFRGSLELTSPVLWTLGFIITFTLGGMTGVMLALPAANFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+M+G+ YWFPKAFG+ L   WGK SFW W IGFYVAFMPLY+L F G  RRM  + 
Sbjct: 428 VVFGMMAGLTYWFPKAFGFTLSEKWGKRSFWCWFIGFYVAFMPLYVLSFFGAVRRMQSYT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q W  +A  G ++I MGI   IIQ  VS R R    D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 NPEWQSWMILAWVGAVIIMMGIACTIIQFWVSIRDRKLNADVTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   DS+W  K ++N +  +  + DI MP+NT  G +IS+F+L++GFALV
Sbjct: 548 PFYNFARLPEVGDIDSFWSQKQRSNEQLDEAPYTDIHMPRNTVAGPVISLFALVLGFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L  +  +   I  +   FN   +YY+ + E+  IE++ 
Sbjct: 608 WHIWWLAAVGALGVAISFLARVFNDDIDYYVPAAEVARIEREH 650


>gi|451988415|ref|ZP_21936544.1| Cytochrome O ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           18A]
 gi|451753913|emb|CCQ89067.1| Cytochrome O ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           18A]
          Length = 641

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/585 (62%), Positives = 454/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 51  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 111 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 171 DYYIWALQISGMGTLLTGINFLVTVFKMRAPGMKLMQMPIFTWTCTFANILIVASFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 231 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 291 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 351 FTIYKGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 411 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI   +IQL VS R R  L D+ GDPW GRTLEW+TSSPP
Sbjct: 471 NPLWKPYLVVAFFGAVLIFCGIACQLIQLFVSVRNRKQLADVNGDPWEGRTLEWATSSPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 531 PFYNFAELPKVQDVDAFHDMKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  + F+  +   I  ++N   +YY+  EEI  IE  R +
Sbjct: 591 WHIWWLMAVGFVGMIGSFIVRSYNQDVDYYVQPEEIEKIESARFQ 635


>gi|313106307|ref|ZP_07792551.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           39016]
 gi|386065144|ref|YP_005980448.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|310879053|gb|EFQ37647.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           39016]
 gi|348033703|dbj|BAK89063.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           NCGM2.S1]
          Length = 658

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/585 (62%), Positives = 454/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 68  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRAPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYKGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI   +IQL VS R R  L D+ GDPW GRTLEW+TSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLIFCGIACQLIQLFVSVRNRKQLADVNGDPWEGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 548 PFYNFAELPKVQDVDAFHDMKKTGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  + F+  +   I  ++N   +YY+  EEI  IE  R +
Sbjct: 608 WHIWWLMAVGFVGMIGSFIVRSYNQDVDYYVQPEEIEKIESARFQ 652


>gi|293607260|ref|ZP_06689601.1| cytochrome o ubiquinol oxidase subunit I [Achromobacter piechaudii
           ATCC 43553]
 gi|292814352|gb|EFF73492.1| cytochrome o ubiquinol oxidase subunit I [Achromobacter piechaudii
           ATCC 43553]
          Length = 658

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/583 (62%), Positives = 460/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+MISLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVALMMISLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN I TI++MRAPGM LM MPIFTWT+L TN+LIVAAFPVL 
Sbjct: 188 DYYIWALQISGLGTTLSGINFIVTILRMRAPGMSLMKMPIFTWTSLVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+GTHFFTND+GGN+MMYVNLIWIWGHPEVYILVLP FG++SE+V+TF+ 
Sbjct: 248 ATLALLTMDRYLGTHFFTNDMGGNVMMYVNLIWIWGHPEVYILVLPAFGVYSEIVATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAKIFNWL
Sbjct: 308 KTLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R   P+LWT+GFMI FVIGGM GV+LA+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRITTPVLWTLGFMIVFVIGGMTGVMLAIPGVSFVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+ L    G+ SF+ W +GF++AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAGMTYWFPKAFGFTLNERLGRYSFYCWFVGFFMAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R+R    D+TGDPW+GRTLEWS SSP 
Sbjct: 488 NPEWQPYLLVALAGAALIMLGIWFLLQQVFVSVRQRKQNQDVTGDPWDGRTLEWSISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D +W  K++   + +  K++DI MPKNT  G+ I +F L+M FAL+
Sbjct: 548 PFYNFAHVPHVDELDQFWEDKQSGKAYKRPAKYEDIHMPKNTGAGVYIGLFGLVMCFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I  F+  +   I   ++   +Y++ + E+  IE   
Sbjct: 608 WHIWWLAIAGFVGMVGSFIARAYDRDVDYWVPAAEVERIENAH 650


>gi|424029807|ref|ZP_17769317.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio cholerae HENC-01]
 gi|408884335|gb|EKM23082.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio cholerae HENC-01]
          Length = 678

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/584 (62%), Positives = 458/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPGYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++WY K++  F   K+ +++ I MPKNT  GI +S ++LI GFA+
Sbjct: 548 PFYNFAHLPKGDVLDAFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALIFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|107100769|ref|ZP_01364687.1| hypothetical protein PaerPA_01001797 [Pseudomonas aeruginosa PACS2]
 gi|116049270|ref|YP_791927.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892577|ref|YP_002441446.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           LESB58]
 gi|254234440|ref|ZP_04927763.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           C3719]
 gi|254239691|ref|ZP_04933013.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           2192]
 gi|296390305|ref|ZP_06879780.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PAb1]
 gi|355645412|ref|ZP_09054125.1| ubiquinol oxidase subunit 1 [Pseudomonas sp. 2_1_26]
 gi|386059645|ref|YP_005976167.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           M18]
 gi|392985198|ref|YP_006483785.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           DK2]
 gi|416856533|ref|ZP_11912107.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           138244]
 gi|416873522|ref|ZP_11917561.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           152504]
 gi|419751401|ref|ZP_14277813.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|420140674|ref|ZP_14648416.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           CIG1]
 gi|421161966|ref|ZP_15620858.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           ATCC 25324]
 gi|421169125|ref|ZP_15627169.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           ATCC 700888]
 gi|421175606|ref|ZP_15633282.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           CI27]
 gi|421181694|ref|ZP_15639186.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           E2]
 gi|424940531|ref|ZP_18356294.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           NCMG1179]
 gi|115584491|gb|ABJ10506.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166371|gb|EAZ51882.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           C3719]
 gi|126193069|gb|EAZ57132.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           2192]
 gi|218772805|emb|CAW28590.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           LESB58]
 gi|334841795|gb|EGM20416.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           138244]
 gi|334844697|gb|EGM23268.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           152504]
 gi|346056977|dbj|GAA16860.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           NCMG1179]
 gi|347305951|gb|AEO76065.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           M18]
 gi|354828875|gb|EHF12975.1| ubiquinol oxidase subunit 1 [Pseudomonas sp. 2_1_26]
 gi|384402175|gb|EIE48526.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|392320703|gb|AFM66083.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           DK2]
 gi|403246573|gb|EJY60287.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           CIG1]
 gi|404527685|gb|EKA37826.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           ATCC 700888]
 gi|404532003|gb|EKA41929.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           CI27]
 gi|404537305|gb|EKA46909.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           ATCC 25324]
 gi|404543316|gb|EKA52600.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           E2]
 gi|453046816|gb|EME94531.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PA21_ST175]
          Length = 658

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/585 (62%), Positives = 454/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 68  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRAPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYKGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI   +IQL VS R R  L D+ GDPW GRTLEW+TSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLIFCGIACQLIQLFVSVRNRKQLADVNGDPWEGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 548 PFYNFAELPKVQDVDAFHDMKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  + F+  +   I  ++N   +YY+  EEI  IE  R +
Sbjct: 608 WHIWWLMAVGFVGMIGSFIVRSYNQDVDYYVQPEEIEKIESARFQ 652


>gi|440731886|ref|ZP_20911862.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas translucens
           DAR61454]
 gi|440370502|gb|ELQ07400.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas translucens
           DAR61454]
          Length = 666

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/586 (64%), Positives = 459/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++ G + G  PP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQAMAHGGNEGIFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA LV ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALVNISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN   TI++MR PGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQISGLGTLLTGINFFVTILRMRTPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+V+TFSS
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELVATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+R   P+LWTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVRMTAPVLWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W++GF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNETLGKASFWCWIVGFFVAFMPLYVLGFMGMTRRMNSYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  ++ MGI   ++Q+  S  KR   +D+TGDPW GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLMVAAAGAAIVGMGIFLNLVQIGYSIWKRKDNLDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K     + +  +++ I MP+NT  G+ I  FS+++GF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWEDKLKGKGWTRPARYEPIHMPRNTAAGVWIGAFSVVLGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + II  +  +   I  TF+   +Y++ +EE+  IE  R  L
Sbjct: 608 WHIWWMAIIGLVGMIGSFIARTFDDDVDYWVPAEEVERIENARFAL 653


>gi|89072120|ref|ZP_01158716.1| cytochrome o ubiquinol oxidase, subunit I [Photobacterium sp.
           SKA34]
 gi|89052221|gb|EAR57672.1| cytochrome o ubiquinol oxidase, subunit I [Photobacterium sp.
           SKA34]
          Length = 678

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/584 (62%), Positives = 459/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGFTDAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMP+V G++N +V
Sbjct: 68  MLVRGFTDAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPMVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGIILTNMSLGLGEFGRTGWLAYPPLSGIKASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYVGMHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPLFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+ IT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIAITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++A+P A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFATPMMWTVGFLITFSVGGMTGVLMAMPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGITYWFPKATGFTMNETWGKRAFVCWIVGFLMAFLPLYALGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT++IAMGI    IQ+  S R R   +D+TGDPW  RT EWSTSSPP
Sbjct: 488 NPEYFPLLTVAAAGTVVIAMGIACQFIQIWASIRDRKHNLDLTGDPWGARTFEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P   + D++WY K +  F   K++ ++ I MPKNT  GI IS  +L+ GF++
Sbjct: 548 PFYNFAHLPKGDEIDAFWYQKQRGEFDPTKEREYERIHMPKNTPTGIYISTLALVFGFSM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L + SF+  ++I I +++N   +YY+  EEI  IE KR
Sbjct: 608 IWYIWWLAVASFVGIVVICIQHSYNEDLDYYVEVEEIKAIESKR 651


>gi|163857012|ref|YP_001631310.1| cytochrome O ubiquinol oxidase subunit I [Bordetella petrii DSM
           12804]
 gi|163260740|emb|CAP43042.1| cytochrome O ubiquinol oxidase subunit I [Bordetella petrii]
          Length = 658

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/584 (62%), Positives = 453/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGILPPHHYDQIFTAHGVIMIFFMAMPFITGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+M+SLF+GEFA+TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVVLMMLSLFVGEFAATGWLAYPPLSGLDYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GT LSGIN I TI++MRAPGM LM MP+FTWTAL TN+LIVAAFPVL 
Sbjct: 188 DYYLWALQISGLGTTLSGINFIVTILRMRAPGMNLMKMPVFTWTALVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+GTHFFTND+GGN+MMYVNLIWIWGHPEVYIL+LP FG FSE+V+T+S 
Sbjct: 248 ATLALLTADRYLGTHFFTNDMGGNVMMYVNLIWIWGHPEVYILILPCFGAFSEIVATYSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMIIS+PTG KIFNWL
Sbjct: 308 KPLFGYTSMVYATAAIGILSFLVWLHHFFTMGSGANVNAFFGIMTMIISVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+    P+LWTIGFM+TFVIGGM GV++A+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVELTTPMLWTIGFMVTFVIGGMTGVLMAIPAVSFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++ + YWFPKAFG+KL    GK SFW WL+GFY+AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAAMTYWFPKAFGFKLNERLGKYSFWCWLVGFYLAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G   +A+GI   + Q+ VS R R   +D TGDPW GRTLEWS  SP 
Sbjct: 488 NPEWQPYLIVALVGACFVALGIWFILQQVFVSIRDRKQNLDTTGDPWGGRTLEWSIPSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D  W  K+N   +     ++DI MP+NT  G+ I  F L M F L+
Sbjct: 548 PFYNFAHVPHVDHLDQHWENKQNGTAYTAPASYEDIHMPRNTGAGVYIGAFGLAMCFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+  +  +   +   ++   +YY+ + E+  IE   +
Sbjct: 608 WHIWWLAIVGLLGMIGSFLVRAYDRDTDYYVPAAEVERIESAHL 651


>gi|424043782|ref|ZP_17781405.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio cholerae HENC-03]
 gi|408888311|gb|EKM26772.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio cholerae HENC-03]
          Length = 678

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/584 (62%), Positives = 458/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDAFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|153833162|ref|ZP_01985829.1| cytOchrome o ubiquinol oxidase, subunit I [Vibrio harveyi HY01]
 gi|148870592|gb|EDL69500.1| cytOchrome o ubiquinol oxidase, subunit I [Vibrio harveyi HY01]
          Length = 678

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/584 (62%), Positives = 457/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGETGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNEAWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDGFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|244539158|dbj|BAH83201.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Ishikawaella
           capsulata Mpkobe]
          Length = 661

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/584 (63%), Positives = 467/584 (79%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+L   HY+QIFTAHGVIMIFFVAMP V G++NFI+
Sbjct: 69  MLLRGFIDAIMMRAQQVLASSGKAGFLSAHHYDQIFTAHGVIMIFFVAMPFVIGLMNFII 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+T  G +L+ +SL IGEFA TGWL YPPLS +A SPGVGV
Sbjct: 129 PLQIGARDVAFPFMNNLSFWLTIAGVVLINLSLGIGEFAQTGWLAYPPLSELAYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM L  MP+FTWTALCTNILI+AAFPVLT
Sbjct: 189 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMNLFKMPVFTWTALCTNILIIAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+  HFFTN++GGNIMMYVNLIWIWGHPEVYILVLPVFGIFSE+ +TFS 
Sbjct: 249 TTLAMLTLDRYLHFHFFTNEMGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEITATFSK 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+++V+ATV+I++L++ VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNW+
Sbjct: 309 KRLFGYTALVWATVIISILAFGVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWI 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI+    +LWTIGF++TF IGGMAGV+LA+P A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 369 FTMYQGRIQMHSAMLWTIGFLLTFSIGGMAGVLLAIPGADFVLHNSLFLVAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG M+GI YWFPKAFG+ L   W K +FWFW+IGF++AFMPLY+LGFMG+TRR+S   
Sbjct: 429 VVFGCMAGITYWFPKAFGFTLNETWAKRAFWFWIIGFFIAFMPLYVLGFMGMTRRLSQDI 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        IA  G +LI++GI+S +I   +S R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 489 DPEFHSLLVIATAGVVLISLGIISQMIMFWISIRDRKKNRDLTGDPWGGRTLEWATSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP I++ D++W +K+    +    +++ I MPKN+  GILIS F+ I GF+++
Sbjct: 549 PCYNFAVIPYIYERDAFWDIKEKGIFYKNALQYETIHMPKNSIAGILISTFATIFGFSMI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W ++I SF+  +   I  +F+   +YYI  EEI  +E + +
Sbjct: 609 WHIWWMSICSFLSGIFTWIIKSFDDDLDYYIPIEEIQNVENQHL 652


>gi|421155188|ref|ZP_15614669.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           ATCC 14886]
 gi|404520818|gb|EKA31468.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           ATCC 14886]
          Length = 658

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/585 (62%), Positives = 454/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 68  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRAPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYQGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI   +IQL VS R R  L D+ GDPW GRTLEW+TSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLIFCGIACQLIQLFVSVRNRKQLADVNGDPWEGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 548 PFYNFAELPKVQDVDAFHDMKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  + F+  +   I  ++N   +YY+  EEI  IE  R +
Sbjct: 608 WHIWWLMAVGFVGMIGSFIVRSYNQDVDYYVQPEEIEKIESARFQ 652


>gi|350533097|ref|ZP_08912038.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio rotiferianus
           DAT722]
          Length = 678

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/584 (62%), Positives = 457/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDGFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|187919713|ref|YP_001888744.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia phytofirmans
           PsJN]
 gi|187718151|gb|ACD19374.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           phytofirmans PsJN]
          Length = 662

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/584 (64%), Positives = 466/584 (79%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMRLQQA+++ +  GYLPP HY+Q+FTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLFRGFADAIMMRLQQALAYANP-GYLPPHHYDQVFTAHGVIMIFFMAMAFMIGLMNIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WSLQ++GIGTLL+G+N  ATI+KMRAPGM  M MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWSLQLSGIGTLLTGVNFFATIVKMRAPGMTFMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN MMY+NLIW WGHPEVYIL+LP FGIFSEVV+TF+ 
Sbjct: 247 VTLALLGLDRYLGMHFFTNDGGGNAMMYLNLIWAWGHPEVYILILPAFGIFSEVVATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MV+AT  I +LS++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVWATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMVIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+ F  PILWTIGFMITF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 367 FTIYKGRLTFTPPILWTIGFMITFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G NYWFPKAFG+KL    GK SFWFW IGF+VAF PLY+LGFMG+TRR++H++
Sbjct: 427 VLFGYLAGFNYWFPKAFGFKLNEKLGKASFWFWQIGFWVAFTPLYVLGFMGMTRRINHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +     W  +AA G  LIA+GI   ++Q++VS R R+     D+TGDPWNG TLEW+ SS
Sbjct: 487 NPLWHPWLILAAGGAALIAIGIALQVLQIVVSIRDRNLPRNRDLTGDPWNGHTLEWAMSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPPVYNFA IP +H+ D++  MK       K  ++DI MP NT+ G++  +FSL++GFA 
Sbjct: 547 PPPVYNFAIIPTVHKLDAFTDMKARKDTQAKPVYRDIHMPSNTSAGVIAGLFSLVLGFAG 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           VWH+W L I+  +  +  VI  +F     YYI +  +  IE+KR
Sbjct: 607 VWHIWWLAIVGLVGAIGTVIVYSFQKNEGYYIPAATVAEIEEKR 650


>gi|409201869|ref|ZP_11230072.1| cytochrome-c oxidase [Pseudoalteromonas flavipulchra JG1]
          Length = 658

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/584 (60%), Positives = 448/584 (76%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 68  MLMRGFADAIMMRTQLAMATSGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAIL+ +SL  GEFA TGW+ YPPLS ++ SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLTAGGAILINLSLAFGEFAKTGWVAYPPLSELSFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGM LM MPIFTWT    NIL+ A+FP+LT
Sbjct: 188 DYYIWALQISGLGTLLTSVNFLVTVFKMRAPGMTLMKMPIFTWTCTWANILVAASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYIL+LP FGIFSE++STF+ 
Sbjct: 248 AVLAMLTLDRYMDFHFFTNEAGGNAMMYINLFWAWGHPEVYILILPAFGIFSEIISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 308 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 368 FTMYRGRLRITVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPK  GYKL+  WGK SFW WL+GF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 428 AVFGYLAGFAYWFPKVMGYKLDERWGKASFWCWLVGFFVAFMPLYVLGFLGMTRRLNHTN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                IW  IA  G  +I  GI+  ++QL+VSY+ R  L D TGDPWNG TLEWST SPP
Sbjct: 488 TPEWNIWLYIACIGAFIIMFGIVFQVVQLVVSYKNREQLQDTTGDPWNGHTLEWSTDSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P++   D+W  MK+    + K   +Q I MPKNT  G+LIS    +  FA++
Sbjct: 548 QYYNFAKTPVVDDIDAWTEMKEQGQAYQKPAHYQPIHMPKNTPTGVLISASLTVFCFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  + F+  + + I   +    +YY+  +EI  IE   +
Sbjct: 608 WHIWWLAAVGFVSAIAVFIKRCYTSDVDYYVQVDEIEQIESAHL 651


>gi|269964139|ref|ZP_06178436.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831094|gb|EEZ85256.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 678

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/584 (62%), Positives = 458/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTSVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDAFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|156976717|ref|YP_001447623.1| cytochrome o ubiquinol oxidase subunit I [Vibrio harveyi ATCC
           BAA-1116]
 gi|444426540|ref|ZP_21221953.1| cytochrome o ubiquinol oxidase subunit I [Vibrio campbellii CAIM
           519 = NBRC 15631]
 gi|156528311|gb|ABU73396.1| hypothetical protein VIBHAR_05492 [Vibrio harveyi ATCC BAA-1116]
 gi|444240192|gb|ELU51738.1| cytochrome o ubiquinol oxidase subunit I [Vibrio campbellii CAIM
           519 = NBRC 15631]
          Length = 678

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/584 (62%), Positives = 457/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGETGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDGFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|388598591|ref|ZP_10156987.1| cytochrome o ubiquinol oxidase subunit I [Vibrio campbellii DS40M4]
          Length = 678

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/584 (62%), Positives = 457/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGETGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TM+ISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMVISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDGFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|163800402|ref|ZP_02194303.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio sp. AND4]
 gi|159175845|gb|EDP60639.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio sp. AND4]
          Length = 678

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/584 (62%), Positives = 457/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNEAWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +WY K++  F   K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDGFWYQKQSGEFDPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +W++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 IWYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|423691128|ref|ZP_17665648.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           SS101]
 gi|387999138|gb|EIK60467.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           SS101]
          Length = 657

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/585 (61%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++     GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTW ALCT++LI+AAFP+LT
Sbjct: 188 DYYIWSLQISGIGTLLTGVNFFVTILKMRTEGMTLFKMPVFTWNALCTSVLILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+ GGN MMYVNLIW WGHPEVYIL+LP FG+FSE+ +TFSS
Sbjct: 248 ATLLMLTLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+G NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYVSLVWATIAITVLSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVRFETPMLWTLGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G+ YWFPKAFG++L    G+ +FW WL+GFY AFMP Y+LGFMG+TRR++HF+
Sbjct: 428 AVFGYMAGLTYWFPKAFGFRLNDKLGRIAFWCWLVGFYFAFMPSYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I  G+ +  +QL VS R RH   D+TGDPW+GRTLEW+T+SPP
Sbjct: 488 NPEWRPWLLLELVGVAIILCGVAAQALQLFVSIRNRHQYRDLTGDPWDGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA  P ++  D++W MK+          ++ I MP+NT  G++IS+F+L+  FALV
Sbjct: 548 PLYNFAEQPKVNDLDAYWGMKERGVSTLSHTDYRSIHMPRNTASGLVISLFALVCSFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +     + +++  +  +++   +Y++ ++E+  IE  R++
Sbjct: 608 WHIWWMAAFGLVASVVAFVVRSYDEDTDYFVPAQEVARIETARLK 652


>gi|387893383|ref|YP_006323680.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fluorescens
           A506]
 gi|387159851|gb|AFJ55050.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           A506]
          Length = 657

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/585 (61%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++     GYLPPEHY+QIFTAHGVIMIFF+AMP V G++N +V
Sbjct: 68  MLLRGFSDAIMMRTQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA LV ISL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+GIGTLL+G+N   TI+KMR  GM L  MP+FTW ALCT++LI+AAFP+LT
Sbjct: 188 DYYIWSLQISGIGTLLTGVNFFVTILKMRTEGMTLFKMPVFTWNALCTSVLILAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+ GGN MMYVNLIW WGHPEVYIL+LP FG+FSE+ +TFSS
Sbjct: 248 ATLLMLTLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+G NVNAFFGI TMII++PTG KIF WL
Sbjct: 308 KRLFGYVSLVWATIAITVLSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+RFE P+LWT+GF++TF IGGM GV+LAVP A+FLLHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRVRFETPMLWTLGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G+ YWFPKAFG++L    G+ +FW WL+GFY AFMP Y+LGFMG+TRR++HF+
Sbjct: 428 AVFGYMAGLTYWFPKAFGFRLNDKLGRIAFWCWLVGFYFAFMPSYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +   G  +I  G+ +  +QL VS R RH   D+TGDPW+GRTLEW+T+SPP
Sbjct: 488 NPEWRPWLLLELVGVAIILCGVAAQALQLFVSIRNRHQYRDLTGDPWDGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P+YNFA  P ++  D++W MK+          ++ I MP+NT  G++IS+F+L+  FALV
Sbjct: 548 PLYNFAEQPKVNDLDAYWGMKERGVSTLSHTDYRSIHMPRNTASGLVISLFALVCSFALV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +     + +++  +  +++   +Y++ ++E+  IE  R++
Sbjct: 608 WHIWWMAAFGLVASVVAFVVRSYDEDTDYFVPAQEVARIETARLK 652


>gi|15596515|ref|NP_250009.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PAO1]
 gi|418583171|ref|ZP_13147241.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|418593102|ref|ZP_13156959.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|421515949|ref|ZP_15962635.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PAO579]
 gi|81783808|sp|Q9I426.1|CYOB_PSEAE RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase polypeptide I
 gi|9947256|gb|AAG04707.1|AE004561_3 cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PAO1]
 gi|375047391|gb|EHS39937.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|375048069|gb|EHS40599.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|404349677|gb|EJZ76014.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           PAO579]
          Length = 658

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/585 (61%), Positives = 453/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 68  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMR PGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRTPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYKGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI   +IQL VS R R  L D+ GDPW GRTLEW+TSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLIFCGIACQLIQLFVSVRNRKQLADVNGDPWEGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 548 PFYNFAELPKVQDVDAFHDMKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  + F+  +   I  ++N   +YY+  EEI  IE  R +
Sbjct: 608 WHIWWLMAVGFVGMIGSFIVRSYNQDVDYYVQPEEIEKIESARFQ 652


>gi|425066912|ref|ZP_18470028.1| ubiquinol oxidase subunit 1 [Proteus mirabilis WGLW6]
 gi|425073655|ref|ZP_18476761.1| ubiquinol oxidase subunit 1 [Proteus mirabilis WGLW4]
 gi|404594926|gb|EKA95481.1| ubiquinol oxidase subunit 1 [Proteus mirabilis WGLW4]
 gi|404601583|gb|EKB01975.1| ubiquinol oxidase subunit 1 [Proteus mirabilis WGLW6]
          Length = 660

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MMFRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVLLINISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI++MRAPGM +M MP+F+W ALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATILRMRAPGMTMMKMPVFSWAALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYIL+LPVFG+FSEV +TFS 
Sbjct: 248 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILILPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V ATVVIT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVGATVVITVLSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI ++ P+LWTIGF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEYKSPMLWTIGFLVTFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW IGF++AFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGFTLNEKWGIRAFWFWFIGFFMAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA+GI+  +IQ+ VS R RH   D+TGDPW GRTLEWS SSP 
Sbjct: 488 NPEFHPMLMVAAGGAALIALGIVCQVIQIYVSIRDRHLNRDLTGDPWGGRTLEWSISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D WW  K+    + +  K++ I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAVEPQVKARDEWWDQKEKGTAYQRPAKYEPIHMPKNTAAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K 
Sbjct: 608 WHIWWLAIVGFAGMIVTWIAKSFDTDVDYYVQVPEIEAIENKH 650


>gi|226329080|ref|ZP_03804598.1| hypothetical protein PROPEN_02983 [Proteus penneri ATCC 35198]
 gi|225202266|gb|EEG84620.1| cytochrome o ubiquinol oxidase, subunit I [Proteus penneri ATCC
           35198]
          Length = 738

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/583 (64%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 76  MMFRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 136 PLQIGARDVAFPFLNSLSFWFFVVGVVLINISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI++MRAPGM +M MP+F+W ALCTN+LI+AAFP+LT
Sbjct: 196 DYWIWSLQISGIGTLLTGVNFFATILRMRAPGMSMMKMPVFSWAALCTNVLIIAAFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYILVLPVFG+FSEV +TFS 
Sbjct: 256 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILVLPVFGVFSEVTATFSK 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V ATVVIT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 316 KRLFGYTSLVGATVVITVLSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI ++ P+LWTIGF+ITF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYQGRIEYKSPMLWTIGFLITFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW IGF++AFMPLYILGFMG+TRR+S   
Sbjct: 436 VVFGCFAGMTYWFPKAFGFTLNEKWGIRAFWFWFIGFFMAFMPLYILGFMGMTRRISQNI 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA+GI   +IQ+ VS R R    D+TGDPW GRTLEWS SSP 
Sbjct: 496 NPEFHPMLMVAAGGAALIAIGIACQVIQIYVSIRDRDQNRDLTGDPWGGRTLEWSISSPA 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D WW  K+    + +  K++ I MPKNT  G++IS FSL++GFA++
Sbjct: 556 PFYNFAVEPNVQTRDEWWDQKEKGTAYQRPTKYEPIHMPKNTGAGVIISAFSLVLGFAMI 615

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K 
Sbjct: 616 WHIWWLAIVGFAGMIVTWIVKSFDTDVDYYVQVPEIEAIENKH 658


>gi|170692895|ref|ZP_02884057.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia graminis
           C4D1M]
 gi|170142551|gb|EDT10717.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia graminis
           C4D1M]
          Length = 668

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/585 (62%), Positives = 463/585 (79%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++ S  GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLVRGFVDAVMMRLQLALAYHSP-GYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ +SL +GEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAILMNLSLVVGEFAQVGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GTL++ IN   TI++MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYIWSLQLSGVGTLITAINFFVTIVRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLGLDRYMGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYRTMVYATCAIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFMITF IGGM GV++A+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTIYRGRLEFTAPVLWTIGFMITFTIGGMTGVMMAIPGVDFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL    GKC+FWFW +GFY +FMPLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLNEKLGKCAFWFWFVGFYASFMPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G +LIA+G++  + Q+ VS   R +    D+TGDPW+GRTLEW+TSS
Sbjct: 487 NPAWHPWLIAAACGVVLIAIGVVFQVAQVWVSVANRNKPEYRDMTGDPWDGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP +H+ D++ +MK+      K   ++DI MP NT+ G+LI +FSL++GFA
Sbjct: 547 PPPVYNFAIIPTVHELDAYTHMKETASGHAKAPVYRDIHMPSNTSAGLLIGMFSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+  L   + +  +  +I  +F     YYI +E++  IE KR
Sbjct: 607 GVWHITWLAAAALLAIVATLIVRSFGDNDGYYIPAEKVREIESKR 651


>gi|227358111|ref|ZP_03842452.1| cytochrome O ubiquinol oxidase subunit I [Proteus mirabilis ATCC
           29906]
 gi|227161447|gb|EEI46484.1| cytochrome O ubiquinol oxidase subunit I [Proteus mirabilis ATCC
           29906]
          Length = 668

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 76  MMFRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 136 PLQIGARDVAFPFLNSLSFWFFVVGVLLINISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI++MRAPGM +M MP+F+W ALCTN+LI+AAFP+LT
Sbjct: 196 DYWIWSLQISGIGTLLTGVNFFATILRMRAPGMTMMKMPVFSWAALCTNVLIIAAFPILT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYIL+LPVFG+FSEV +TFS 
Sbjct: 256 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILILPVFGVFSEVTATFSK 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V ATVVIT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 316 KRLFGYTSLVGATVVITVLSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI ++ P+LWTIGF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYQGRIEYKSPMLWTIGFLVTFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW IGF++AFMPLYILGFMG+TRR+S   
Sbjct: 436 VVFGCFAGMTYWFPKAFGFTLNEKWGIRAFWFWFIGFFMAFMPLYILGFMGMTRRLSQNI 495

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA+GI+  +IQ+ VS R RH   D+TGDPW GRTLEWS SSP 
Sbjct: 496 NPEFHPMLMVAAGGAALIALGIVCQVIQIYVSIRDRHLNRDLTGDPWGGRTLEWSISSPA 555

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D WW  K+    + +  K++ I MPKNT  G++IS FSL+ GFA++
Sbjct: 556 PFYNFAVEPQVKARDEWWDQKEKGTAYQRPAKYEPIHMPKNTAAGVIISAFSLVFGFAMI 615

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K 
Sbjct: 616 WHIWWLAIVGFAGMIVTWIAKSFDTDVDYYVQVPEIETIENKH 658


>gi|197284019|ref|YP_002149891.1| cytochrome O ubiquinol oxidase subunit I [Proteus mirabilis HI4320]
 gi|194681506|emb|CAR40378.1| cytochrome O ubiquinol oxidase subunit I [Proteus mirabilis HI4320]
          Length = 660

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/583 (64%), Positives = 462/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFF+A P V G++N +V
Sbjct: 68  MMFRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFMATPFVVGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G +L+ ISL IGEFA TGWL YPPLSG+  +PGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVLLINISLGIGEFAQTGWLAYPPLSGLEYNPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTLL+G+N  ATI++MRAPGM +M MP+F+W ALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSLQISGIGTLLTGVNFFATILRMRAPGMTMMKMPVFSWAALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NL+W WGHPEVYIL+LPVFG+FSEV +TFS 
Sbjct: 248 VTITLLTLDRYLGTHFFTNDMGGNMMMYINLVWAWGHPEVYILILPVFGVFSEVTATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V ATVVIT+LS+IVWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVGATVVITVLSFIVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI ++ P+LWTIGF++TF +GGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIEYKSPMLWTIGFLVTFSVGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WG  +FWFW IGF++AFMPLYILGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGFTLNEKWGIRAFWFWFIGFFMAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA G  LIA+GI+  +IQ+ VS R RH   D+TGDPW GRTLEWS SSP 
Sbjct: 488 NPEFHPMLMVAAGGAALIALGIVCQVIQIYVSIRDRHLNRDLTGDPWGGRTLEWSISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P +   D WW  K+    + +  K++ I MPKNT  G++IS FSL+ GFA++
Sbjct: 548 PFYNFAVEPQVKARDEWWDQKEKGTAYQRPAKYEPIHMPKNTAAGVIISAFSLVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+ F   ++  I  +F+   +YY+   EI  IE K 
Sbjct: 608 WHIWWLAIVGFAGMIVTWIAKSFDTDVDYYVQVPEIETIENKH 650


>gi|424903498|ref|ZP_18327011.1| ubiquinol oxidase subunit I [Burkholderia thailandensis MSMB43]
 gi|390931371|gb|EIP88772.1| ubiquinol oxidase subunit I [Burkholderia thailandensis MSMB43]
          Length = 670

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/587 (62%), Positives = 459/587 (78%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVGLFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLIVGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TI++MRAPGM +M MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTILRMRAPGMTMMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G  LIA+G+L  + Q+ V+ R R+     D TGDPW GRTLEW+TSS
Sbjct: 487 NPAWHPWLIVAACGVALIAIGVLHQVAQVWVAVRNRNEPGYRDTTGDPWGGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP VYNFA IP +H  D   Y K++       K   +QDI MP NT  G +I + SL++G
Sbjct: 547 PPAVYNFAVIPTVHALDELAYRKEHGIGIGAGKNVVYQDIHMPSNTGAGFVIGVLSLVLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FALVWH+W L I S +  +  V+  +      YYI ++ +  IE+KR
Sbjct: 607 FALVWHIWWLAIASLVGIVATVVLYSAGDNDGYYIPADTVRKIEEKR 653


>gi|406036897|ref|ZP_11044261.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter parvus DSM
           16617 = CIP 108168]
          Length = 663

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNIAV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTIAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW IGFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFIGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI  F++Q+IV + +R   +D TGDPW+ RT EW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLIAIGIACFLMQIIVGFLQRKDNMDYTGDPWDSRTFEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +W  K+N   + +D K++DI MP N   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHLPAADGVDRFWTDKENGVAYARDTKYEDIHMPTNRAAGFIIAMFITVLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|359440487|ref|ZP_09230401.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20429]
 gi|392535984|ref|ZP_10283121.1| cytochrome-c oxidase [Pseudoalteromonas arctica A 37-1-2]
 gi|358037522|dbj|GAA66650.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20429]
          Length = 662

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/582 (61%), Positives = 452/582 (77%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWFTASGAILINMSLVFGEFAKTGWVAYPPLSELTFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N +AT+ KMRAPGM LM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLATVFKMRAPGMTLMKMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+LGGN MMY+NL W WGHPEVYILVLP FGIFSE++STF+ 
Sbjct: 250 AVLAMLTLDRYLDFHFFTNELGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIISTFAG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRISVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL   WGK SFW W+IGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFVFWFPKAMGFKLNEKWGKASFWCWIIGFFVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+S +IQL VS+R R  L D TGDPWNG TLEW+TSSPP
Sbjct: 490 NPDWNIWLYIAAGGAVIIMFGIVSQVIQLYVSFRDREALDDTTGDPWNGHTLEWATSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            +YNFA IP I   D+W  MK+    +  K  +  I MPKNT+ G+L++    +  FA++
Sbjct: 550 QIYNFATIPHIDDIDAWTDMKEKGQAYQDKANYSPIHMPKNTSAGVLMAASLTVFCFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L ++  +  + I I   +    +YYI  +EI   E  
Sbjct: 610 WHIWWLAVVGLVGAIAIFIKRCYTSDVDYYIQPDEIARTEAA 651


>gi|332532047|ref|ZP_08407930.1| cytochrome O ubiquinol oxidase, subunit I [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038388|gb|EGI74832.1| cytochrome O ubiquinol oxidase, subunit I [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 662

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/582 (61%), Positives = 452/582 (77%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWFTASGAILINLSLVFGEFAKTGWVAYPPLSELTFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N +AT+ KMRAPGM LM MPIFTW     NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLATVFKMRAPGMTLMKMPIFTWACTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+LGGN MMY+NL W WGHPEVYILVLP FGIFSE++STF+ 
Sbjct: 250 AVLAMLTLDRYLDFHFFTNELGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIISTFAG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRISVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL   WGK SFW W+IGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFVFWFPKAMGFKLNEKWGKASFWCWIIGFFVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+S +IQL VS+R R  L D TGDPWNG TLEW+TSSPP
Sbjct: 490 NPDWNIWLYIAAGGAVIIMFGIISQVIQLYVSFRDREALDDTTGDPWNGHTLEWATSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            +YNFA IP I   D+W  MK+    +  K  +  I MPKNT+ G+L++    +  FA++
Sbjct: 550 QIYNFATIPHIDDIDAWTDMKEKGQAYQDKANYSPIHMPKNTSAGVLMAASLTVFCFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L ++  +  + I I   +    +YYI  +EI  IE  
Sbjct: 610 WHIWWLAVVGLVGGIAIFIKRCYTSDVDYYIQPDEIARIEAA 651


>gi|424038912|ref|ZP_17777397.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio cholerae HENC-02]
 gi|408893578|gb|EKM30727.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio cholerae HENC-02]
          Length = 678

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/584 (62%), Positives = 458/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N IV
Sbjct: 68  MLIRGFADAVMMRSQQLLSAAGESGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFVVGVILTNMSLGLGEFGRTGWLAYPPLSGIEASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M +M MP+FTW +LC NILI+ +FP+LT
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPMMKMPVFTWASLCANILIIISFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFTNDLGGN+MMYVNLIW WGHPEVYIL+LP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYIGTHFFTNDLGGNVMMYVNLIWAWGHPEVYILILPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+VIT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIVITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRIRF  P++WT+GF+ITF +GGM GV++AVP A+F+LHNS+FL+AHFHNVIIGG
Sbjct: 368 FTMYKGRIRFTTPMMWTVGFLITFSVGGMTGVLMAVPGADFVLHNSVFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F  W++GF +AF+PLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAAITYWFPKATGFTMNETWGKRAFICWIVGFLMAFLPLYALGFMGMTRRLSQDL 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        +AA GT +IA+G+    IQ+ VS R R    D+TGDPW GRT EW+TSSPP
Sbjct: 488 NPEYFPLLAVAAAGTAVIALGVACQFIQIYVSVRDREQNRDLTGDPWGGRTFEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN-NFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++WY K++  F+  K+ +++ I MPKNT  GI +S ++L+ GFA+
Sbjct: 548 PFYNFAHLPKGDVLDAFWYQKQSGEFEPTKEVEYERIHMPKNTPTGIYVSAWALVFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + ++W L   SF+  ++  I +++N   +YY+  EEI  IE +R
Sbjct: 608 ICYIWWLAAASFVGIIVTCIQHSYNDDVDYYVEVEEIKAIEAER 651


>gi|325921007|ref|ZP_08182890.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Xanthomonas
           gardneri ATCC 19865]
 gi|325548514|gb|EGD19485.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Xanthomonas
           gardneri ATCC 19865]
          Length = 666

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/586 (64%), Positives = 459/586 (78%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++     G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRAQQALAGNGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+GIN   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGINFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATSCIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKIGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I MGI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAAGAAIIGMGIFLNLVQIGYSVWKRKEHMDYTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +  K++ I MP+NT  G+ I  FS++MGF L+
Sbjct: 548 PFYNFAVLPHIDDRDQFWADKQNGKGWVRPSKYEAIHMPRNTGAGVYIGAFSVLMGFGLI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L II  +  +   I  TF+   +Y++ ++E+  IE  R  L
Sbjct: 608 WHIWWLAIIGLVGMIGSFIARTFDDDIDYWVPADEVERIENARFAL 653


>gi|417525788|ref|ZP_12184543.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Urbana str. R8-2977]
 gi|353669724|gb|EHD06546.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Urbana str. R8-2977]
          Length = 675

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/595 (62%), Positives = 466/595 (78%), Gaps = 13/595 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGAR------------DVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPP 108
           PLQIGAR            DVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPP
Sbjct: 128 PLQIGARARATLRSLSGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPP 187

Query: 109 LSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCT 168
           LSGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC 
Sbjct: 188 LSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCA 247

Query: 169 NILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVF 228
           N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVF
Sbjct: 248 NVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVF 307

Query: 229 GIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMII 288
           G+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII
Sbjct: 308 GVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMII 367

Query: 289 SIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLF 348
           +IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLF
Sbjct: 368 AIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLF 427

Query: 349 LVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILG 408
           L+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LG
Sbjct: 428 LIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLG 487

Query: 409 FMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN 468
           FMG+TRR+S   D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW 
Sbjct: 488 FMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWG 547

Query: 469 GRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILI 527
           GRTLEWSTSSPPP YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I
Sbjct: 548 GRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVI 607

Query: 528 SIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + F+ + GFA++WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 608 AAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 662


>gi|379009858|ref|YP_005267671.1| cytochrome o ubiquinol oxidase subunit I [Wigglesworthia
           glossinidia endosymbiont of Glossina morsitans morsitans
           (Yale colony)]
 gi|375158382|gb|AFA41448.1| cytochrome o ubiquinol oxidase subunit I [Wigglesworthia
           glossinidia endosymbiont of Glossina morsitans morsitans
           (Yale colony)]
          Length = 654

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/584 (63%), Positives = 464/584 (79%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DAVMMR  QAI      G+LPP HY+QI TAHGVIMI F+A P + G++N IV
Sbjct: 68  MMFRGFADAVMMRAHQAIVSSGQSGFLPPHHYDQIITAHGVIMIIFMATPFIVGLMNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL IGEFA TGW  YPPLS I  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFMVGVVLINLSLGIGEFAQTGWTAYPPLSEIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIGT L+GIN   TI++MRAP M +M MP+FTWT+ CTNILI+AAFP+LT
Sbjct: 188 DYWIWSIQISGIGTTLTGINFFVTILRMRAPNMSMMKMPVFTWTSFCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             +FL TLDRY+ THFFTND+GGN+MMY+NL W WGHPEVYILVLPVFGIFSE+VSTFS 
Sbjct: 248 VTIFLLTLDRYLNTHFFTNDMGGNMMMYINLFWAWGHPEVYILVLPVFGIFSEIVSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+S+V+AT+ ITLLS+ VWLHHFFTMGSG++VN+FFGI TMII+IPTG K+FNW+
Sbjct: 308 KSLFGYNSLVWATIAITLLSFCVWLHHFFTMGSGSDVNSFFGIMTMIIAIPTGVKVFNWI 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+G+I+F   +LWTIGF+ITF IGGM GV+L+VP A+++LHNSLFL+ HFHNVIIGG
Sbjct: 368 FTIYKGKIKFHSSMLWTIGFIITFSIGGMTGVLLSVPGADYVLHNSLFLIGHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+ L   WGK +FWFW+IGFY+AFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGFTLNETWGKRAFWFWIIGFYIAFMPLYVLGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D    I   IAA GT+LIA+GI+  IIQL++S + +H   DITGDPWNGRTLEWST SPP
Sbjct: 488 DSEFHIPLSIAALGTILIALGIICQIIQLLISIKNKHKYRDITGDPWNGRTLEWSTKSPP 547

Query: 481 PVYNFAFIP-LIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P+YNFA IP   +  D++W++KK   K   +  +  I MPKNT+ GI ISIFSLI GFA+
Sbjct: 548 PLYNFAIIPSECNVRDAFWFIKKEKSKKNYQISYDPIHMPKNTSSGIFISIFSLIFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           VWH+W ++I      ++I I+++F   ++YYI  + I  IE  +
Sbjct: 608 VWHIWWMSIFGIFGVIMIWIFDSFQKNKDYYIPVKTIYDIENNK 651


>gi|407685614|ref|YP_006800788.1| cytochrome-c oxidase [Alteromonas macleodii str. 'English Channel
           673']
 gi|407247225|gb|AFT76411.1| cytochrome-c oxidase [Alteromonas macleodii str. 'English Channel
           673']
          Length = 662

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 70  MLLRGFADAIMMRTQLAMATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV +SL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNVSLGLGEFAKTGWVAYPPLAGLELSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGMKLM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMKLMQMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I +L +IVWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAIAILGFIVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLILSVPVLWTLGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDEKTGKAAFWCWQIGFLLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAAFG  +IA+GI   ++QL VS++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAAFGAFVIAIGIFFQLLQLFVSFKNKEKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W  MK+    + + +K+  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFAKIPHIKDIDAWTDMKERGESYQRPEKYTPIHMPKNTSAGVFMSMSFTLMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L ++  +  + + I   +    +YY+  +E+  +E   +
Sbjct: 610 WHIWWLAVVGLVAGIGVFIKRCYTSDVDYYVQVDEVERVEATHL 653


>gi|332143299|ref|YP_004429037.1| cytochrome-c oxidase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553321|gb|AEB00040.1| cytochrome-c oxidase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 662

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 70  MLLRGFADAIMMRTQLAMATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV +SL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNVSLGLGEFAKTGWVAYPPLAGLEFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGMKLM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMKLMQMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I +L +IVWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAIAILGFIVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLILSVPVLWTLGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDEKTGKAAFWCWQIGFLLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAAFG  +IA+GI   ++QL VS++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAAFGAFVIAIGIFFQLLQLFVSFKNKEKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W  MK+    + + +K+  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFAKIPHIKDIDAWTDMKERGESYQRPEKYTPIHMPKNTSAGVFMSMSFTLMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L ++  +  + + I   +    +YY+  +E+  +E   +
Sbjct: 610 WHIWWLAVVGLVAGIGVFIKRCYTSDVDYYVQVDEVERVEATHL 653


>gi|387903225|ref|YP_006333564.1| cytochrome O ubiquinol oxidase subunit I [Burkholderia sp. KJ006]
 gi|387578117|gb|AFJ86833.1| Cytochrome O ubiquinol oxidase subunit I [Burkholderia sp. KJ006]
          Length = 670

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/587 (61%), Positives = 455/587 (77%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++ S  GYLPP HY+Q+FTAHGVIMIFF+AM L+    N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNSP-GYLPPHHYDQVFTAHGVIMIFFMAMALLVAFFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAAILMNISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TI+KMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIVKMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+  HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TF+ 
Sbjct: 247 VALALLGLDRYLDMHFFTNDAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YWFPK FG++L+  +GK +FW W +GFY +F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYFAGVHYWFPKVFGFRLDEKFGKRAFWCWFLGFYASFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G +LIA+G+L  +  + V +R RH     D TGDPWNGRTLEW+TSS
Sbjct: 487 NPAWHPWLVAAACGVVLIALGVLCQVASVWVGWRSRHQPQYRDATGDPWNGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP VYNFA IP +H+ D   Y K         K   + DI MP NT+ G  + IFSL++G
Sbjct: 547 PPAVYNFAVIPNVHELDELAYRKAKGLGLGLGKNVRYDDIHMPSNTSAGFFVGIFSLLLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FALVWH+W L I + +  +  V+  +      YYI ++ +  IE++R
Sbjct: 607 FALVWHIWWLAIAALVGIVATVVLYSAQDNDGYYIPADTVRRIEEQR 653


>gi|407689550|ref|YP_006804723.1| cytochrome-c oxidase [Alteromonas macleodii str. 'Balearic Sea
           AD45']
 gi|407292930|gb|AFT97242.1| cytochrome-c oxidase [Alteromonas macleodii str. 'Balearic Sea
           AD45']
          Length = 662

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 70  MLLRGFADAIMMRTQLAMATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV +SL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNVSLGLGEFAKTGWVAYPPLAGLEFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGMKLM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMKLMQMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I +L +IVWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAIAILGFIVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLILSVPVLWTLGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDEKTGKAAFWCWQIGFLLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAAFG  +IA+GI   ++QL VS++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAAFGAFVIAIGIFFQLLQLFVSFKNKEKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W  MK+    + + +K+  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFAKIPHIKDIDAWTDMKERGESYQRPEKYTPIHMPKNTSAGVFMSMSFTLMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L ++  +  + + I   +    +YY+  +E+  +E   +
Sbjct: 610 WHIWWLAVVGLVAGIGVFIKRCYTSDVDYYVQVDEVERVEATHL 653


>gi|219681821|ref|YP_002468207.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           5A (Acyrthosiphon pisum)]
 gi|257471523|ref|ZP_05635522.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624664|gb|ACL30819.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           5A (Acyrthosiphon pisum)]
          Length = 662

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/584 (64%), Positives = 456/584 (78%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA++MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N ++
Sbjct: 68  MLFRGFVDAILMRTQQVVASAGFKGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+    A+L+ +SL IGEFA TGWL YPPLSGI  S GVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLNVSSAVLLTLSLGIGEFAQTGWLAYPPLSGIKYSSGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+GIN + TI+KMRAPGM    MP+FTWT+LCTNILIV +FPVLT
Sbjct: 188 DYWIWSLQISGVGTTLTGINFLVTILKMRAPGMSFFKMPVFTWTSLCTNILIVISFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY   HFFTNDLGGN MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLVLLTLDRYFNFHFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+GA+VN FFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYVSLVWATLSITILSFIVWLHHFFTMGAGADVNTFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+     ILWT+GF++TF IGGM GV+L+VP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTIYQGRVHMHSSILWTLGFLVTFSIGGMTGVLLSVPPADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPK FG+ L   WGK +FWFW+IGF++AF+PLY LG MG+TRR+S   
Sbjct: 428 VVFGCFAGINYWFPKLFGFVLNEIWGKRAFWFWIIGFFLAFIPLYFLGLMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D    +   IAA G   I +GI+  +IQ  +S ++R   +D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 DSEFHMLLCIAAIGACFIGIGIICQVIQFFISIKERRHNLDLTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN---NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P+YNFA IP +   D +W  K+    N       + DI MPKNT +G +ISIFSL  GF+
Sbjct: 548 PLYNFAIIPKVEDRDDFWRNKEGQHCNKLINSINYHDIHMPKNTGLGFMISIFSLFFGFS 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWH+  L I+SF+  +I +  N+ N    Y IS+EEI  IE +
Sbjct: 608 AVWHITWLCILSFLAIIISLFINSLNEDTEYTISAEEIKKIEHQ 651


>gi|134296913|ref|YP_001120648.1| cytochrome-c oxidase [Burkholderia vietnamiensis G4]
 gi|134140070|gb|ABO55813.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Burkholderia
           vietnamiensis G4]
          Length = 670

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/587 (61%), Positives = 455/587 (77%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++ S  GYLPP HY+Q+FTAHGVIMIFF+AM L+    N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNSP-GYLPPHHYDQVFTAHGVIMIFFMAMALLVAFFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAAILMNISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TI+KMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITAINFFVTIVKMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+  HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TF+ 
Sbjct: 247 VALALLGLDRYLDMHFFTNDAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRIEFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YWFPK FG++L+  +GK +FW W +GFY +F+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYFAGVHYWFPKVFGFRLDEKFGKRAFWCWFLGFYASFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G +LIA+G+L  +  + V +R RH     D TGDPWNGRTLEW+TSS
Sbjct: 487 NPAWHPWLVAAACGVVLIALGVLCQVASVWVGWRNRHQPQYRDATGDPWNGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP VYNFA IP +H+ D   Y K         K   + DI MP NT+ G  + IFSL++G
Sbjct: 547 PPAVYNFAVIPNVHELDELAYRKAKGLGLGLGKNVRYDDIHMPSNTSAGFFVGIFSLLLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FALVWH+W L I + +  +  V+  +      YYI ++ +  IE++R
Sbjct: 607 FALVWHIWWLAIAALVGIVATVVLYSAQDNDGYYIPADTVRRIEEQR 653


>gi|423013740|ref|ZP_17004461.1| ubiquinol oxidase polypeptide I [Achromobacter xylosoxidans AXX-A]
 gi|338783234|gb|EGP47602.1| ubiquinol oxidase polypeptide I [Achromobacter xylosoxidans AXX-A]
          Length = 658

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/585 (62%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+MISLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVALMMISLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN I TI++MRAPGM LM MPIFTWT+L TN+LIVAAFPVL 
Sbjct: 188 DYYIWALQISGLGTTLSGINFIVTILRMRAPGMTLMKMPIFTWTSLVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+GTHFFTND+GGN+MMYVNLIWIWGHPEVYILVLP FG++SEVV+TF+ 
Sbjct: 248 ATLALLTADRYLGTHFFTNDMGGNVMMYVNLIWIWGHPEVYILVLPAFGVYSEVVATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAKIFNWL
Sbjct: 308 KTLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R   P+LWT+GFM+ FVIGGM GV+LA+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRITTPVLWTLGFMLVFVIGGMTGVMLAIPGVSFVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    G+ SF+ W +GF++AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAGMTYWFPKAFGFKLNERLGRYSFYCWFVGFFLAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R+R    DITGDPW+GRTLEW+ SSP 
Sbjct: 488 NPEWQPYLLVALAGAALIMLGIWFLLQQVFVSVRQRKQNQDITGDPWDGRTLEWAISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D +W  K+N   + +  K++DI MPKNT  G+ I  F L+M FAL+
Sbjct: 548 PFYNFAHVPHVDELDQFWEDKQNGKAYKRPAKYEDIHMPKNTAAGVFIGAFGLVMCFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L+I+ F+  +   I   ++   +Y++ + E+  IE     
Sbjct: 608 WHIWWLSIVGFVGMIGSFIVRAYDRDVDYWVPAAEVERIENAHFE 652


>gi|85058644|ref|YP_454346.1| cytochrome o ubiquinol oxidase subunit I [Sodalis glossinidius str.
           'morsitans']
 gi|84779164|dbj|BAE73941.1| cytochrome o ubiquinol oxidase subunit I [Sodalis glossinidius str.
           'morsitans']
          Length = 664

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/584 (63%), Positives = 460/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+Q+ TAHGVIMI F+A P V G++N  V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQVVTAHGVIMIIFMATPFVVGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW    G IL+ +SL +GEFA TGW+ YPPL+G   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWFFVVGVILINVSLGVGEFAQTGWVAYPPLAGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QIAGIGT L+G+N  ATI++MRAPGM +M MP+FTW ALCTN+LI+AAFP+LT
Sbjct: 188 DYWIWSIQIAGIGTTLTGVNFFATILRMRAPGMPMMKMPVFTWAALCTNVLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NL W WGHPEVYILVLPVFG+FSE+V+TFS 
Sbjct: 248 VTIVLLTLDRYLGTHFFTNDMGGNMMMYINLFWAWGHPEVYILVLPVFGVFSELVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+ VWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFCVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+    P+LWT+GF+ITF IGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTIYQGRVVLNSPMLWTVGFVITFSIGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFGY L   WGK +FWFW+IGFYVAFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGYTLNETWGKRAFWFWIIGFYVAFMPLYALGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ++VS R R    D+TGDPW GRTLEW+TSSPP
Sbjct: 488 DPVFHPLLMVAAAGAALIALGILCQVIQIVVSVRDREQNRDLTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLI-HQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P + +Q D +W MK+    + K   ++ I MPKNT  G++I+ FSL+  FAL
Sbjct: 548 PFYNFAIVPEVNNQRDVFWEMKEEGSAYQKPLAYEPIHMPKNTGAGVVIAAFSLVFSFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +WH+W L I+ F   ++  I ++FN   +YY+  EE+  IE + 
Sbjct: 608 IWHIWWLAIVGFAGMIVTWIVHSFNEDVDYYVPVEEVERIENRH 651


>gi|15617069|ref|NP_240282.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           APS (Acyrthosiphon pisum)]
 gi|11386748|sp|P57543.1|CYOB_BUCAI RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase polypeptide I
 gi|25285434|pir||H84984 bo-type ubiquinol oxidase (EC 1.10.3.-) chain I [similarity] -
           Buchnera sp. (strain APS)
 gi|10039134|dbj|BAB13168.1| cytochrome o ubiquinol oxidase subunit I [Buchnera aphidicola str.
           APS (Acyrthosiphon pisum)]
          Length = 662

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/584 (64%), Positives = 456/584 (78%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA++MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N ++
Sbjct: 68  MLFRGFVDAILMRTQQVVASAGFKGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+    A+L+ +SL IGEFA TGWL YPPLSGI  S GVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLNVSSAVLLTLSLGIGEFAQTGWLAYPPLSGIKYSSGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+GIN + TI+KMRAPGM    MP+FTWT+LCTNILIV +FPVLT
Sbjct: 188 DYWIWSLQISGVGTTLTGINFLVTILKMRAPGMSFFKMPVFTWTSLCTNILIVISFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY   HFFTNDLGGN MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLVLLTLDRYFNFHFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+GA+VN FFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYVSLVWATLSITILSFIVWLHHFFTMGAGADVNTFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+     ILWT+GF++TF IGGM GV+L+VP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTIYQGRVHMHSSILWTLGFLVTFSIGGMTGVLLSVPPADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPK FG+ L   WGK +FWFW+IGF++AF+PLY LG MG+TRR+S   
Sbjct: 428 VVFGCFAGINYWFPKLFGFVLNEIWGKRAFWFWIIGFFLAFIPLYFLGLMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D    +   IAA G   I +GI+  +IQ  +S ++R   +D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 DSEFHMLLCIAAIGACFIGIGIICQVIQFFISIKERRHNLDLTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN---NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P+YNFA IP +   D +W  K+    N       + DI MPKNT +G +ISIFSL  GF+
Sbjct: 548 PLYNFAIIPKVEDRDDFWRNKEGQHYNKLINSINYHDIHMPKNTGLGFMISIFSLFFGFS 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWH+  L I+SF+  +I +  N+ N    Y IS+EEI  IE +
Sbjct: 608 AVWHITWLCILSFLAIIISLFINSLNEDTEYTISAEEIKKIEHQ 651


>gi|219682376|ref|YP_002468760.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|384226266|ref|YP_005617429.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|384227321|ref|YP_005619071.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|414562825|ref|YP_005618016.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|219622109|gb|ACL30265.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|311086197|gb|ADP66279.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086773|gb|ADP66854.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087361|gb|ADP67441.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
          Length = 662

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/584 (64%), Positives = 456/584 (78%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA++MR QQ ++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N ++
Sbjct: 68  MLFRGFVDAILMRTQQVVASAGFKGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+    A+L+ +SL IGEFA TGWL YPPLSGI  S GVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLNVSSAVLLTLSLGIGEFAQTGWLAYPPLSGIKYSSGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+GIN + TI+KMRAPGM    MP+FTWT+LCTNILIV +FPVLT
Sbjct: 188 DYWIWSLQISGVGTTLTGINFLVTILKMRAPGMSFFKMPVFTWTSLCTNILIVISFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY   HFFTNDLGGN MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTLVLLTLDRYFNFHFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+GA+VN FFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYVSLVWATLSITILSFIVWLHHFFTMGAGADVNTFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+     ILWT+GF++TF IGGM GV+L+VP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTIYQGRVHMHSSILWTLGFLVTFSIGGMTGVLLSVPPADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPK FG+ L   WGK +FWFW+IGF++AF+PLY LG MG+TRR+S   
Sbjct: 428 VVFGCFAGINYWFPKLFGFVLNEIWGKRAFWFWIIGFFLAFIPLYFLGLMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D    +   IAA G   I +GI+  +IQ  +S ++R   +D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 DSEFHMLLCIAAIGACFIGIGIICQVIQFFISIKERRHNLDLTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN---NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P+YNFA IP +   D +W  K+    N       + DI MPKNT +G +ISIFSL  GF+
Sbjct: 548 PLYNFAIIPKVEDRDDFWRNKEGQHYNKLINSINYHDIHMPKNTGLGFMISIFSLFFGFS 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWH+  L I+SF+  +I +  N+ N    Y IS+EEI  IE +
Sbjct: 608 AVWHITWLCILSFLAIIISLFINSLNEDTEYTISAEEIKKIEHQ 651


>gi|359452405|ref|ZP_09241754.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20495]
 gi|414069828|ref|ZP_11405819.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           Bsw20308]
 gi|358050538|dbj|GAA78003.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20495]
 gi|410807791|gb|EKS13766.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           Bsw20308]
          Length = 662

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/582 (61%), Positives = 451/582 (77%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWFTASGAILINLSLVFGEFAKTGWVAYPPLSELTFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N +AT+ KMRAPGM LM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLATVFKMRAPGMTLMKMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+LGGN MMY+NL W WGHPEVYILVLP FGIFSE++STF+ 
Sbjct: 250 AVLAMLTLDRYLDFHFFTNELGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIISTFAG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRISVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL   WGK SFW W+IGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFVFWFPKAMGFKLNEKWGKASFWCWIIGFFVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+S +IQL VS+R R  L D TGDPWNG TLEW+TSSPP
Sbjct: 490 NPDWNIWLYIAAGGAVIIMFGIISQVIQLYVSFRDREALDDTTGDPWNGHTLEWATSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            +YNFA IP I   D+W  MK+    +  K  +  I MPKNT+ G+ ++    +  FA++
Sbjct: 550 QIYNFATIPHIDDIDAWTDMKEKGQAYQDKANYSPIHMPKNTSAGVFMAASLTVFCFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L ++  +  + I I   +    +YYI  +EI   E  
Sbjct: 610 WHIWWLAVVGLVGGIAIFIKRCYTSNVDYYIQPDEIARTEAA 651


>gi|307725996|ref|YP_003909209.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia sp.
           CCGE1003]
 gi|307586521|gb|ADN59918.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp.
           CCGE1003]
          Length = 668

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/585 (62%), Positives = 459/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++ S  GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLVRGFVDAVMMRLQLALAYHSP-GYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ +SL IGEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAILMNLSLVIGEFAQVGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GTL++ IN   TI++MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYIWSLQLSGVGTLITAINFFVTIVRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLGLDRYMGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYRTMVYATCAIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFMITF IGGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTIYRGRLEFSAPVLWTIGFMITFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL    GKC+FW W +GFY +FMPLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLNEKLGKCAFWCWFVGFYASFMPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G  LIA+G++  + Q+ VS   R +    D+TGDPW+GRTLEW+TSS
Sbjct: 487 NPAWHPWLIAAACGVALIALGVVFQVAQVWVSVVNRNKPQYRDVTGDPWDGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA IP +H+ D++ +MK+      K   + DI MP NT+ G+ I +FSL +GFA
Sbjct: 547 PPPAYNFAIIPTVHELDAYAHMKETARTEAKAPAYSDIHMPSNTSAGLFIGVFSLALGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+  L + + +  +  +I  +F     YYIS++ +  IE KR
Sbjct: 607 GVWHITWLAVAALLAIVATLIARSFGNNDGYYISADTVREIESKR 651


>gi|146294940|ref|YP_001185364.1| cytochrome-c oxidase [Shewanella putrefaciens CN-32]
 gi|145566630|gb|ABP77565.1| Cytochrome-c oxidase [Shewanella putrefaciens CN-32]
          Length = 659

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/585 (61%), Positives = 456/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR+SH +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRISHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  +AA G  +I +GI+   IQL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPTWNLWIYLAAVGACIIMVGIILQFIQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    +   K +Q I MPKNT+ GIL+++     GFA +
Sbjct: 550 QCYNFAKLPQVADIDAFTDAKEKGLAYQGLKHYQPIHMPKNTSSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGLVGAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|323529723|ref|YP_004231875.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia sp.
           CCGE1001]
 gi|323386725|gb|ADX58815.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp.
           CCGE1001]
          Length = 668

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/585 (62%), Positives = 461/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++ S  GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLVRGFIDAVMMRLQLALAYHSP-GYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ +SL IGEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAILMNLSLVIGEFAQVGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GTL++ IN   TI++MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYIWSLQLSGVGTLITAINFFVTIVRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLGLDRYMGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYRTMVYATCAIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFMITF IGGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTIYRGRLEFSAPVLWTIGFMITFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL    GKC+FW W +GFY +FMPLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLNEKLGKCAFWCWFVGFYASFMPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G  LIA+G+   + Q+ VS   RK+    D TGDPW+GRTLEW+T+S
Sbjct: 487 NPAWHPWLIAAACGVALIAVGVAFQVAQVWVSVANRKKPECRDTTGDPWDGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP +H+ D++ +MK+ +    K   ++DI MP NT+ G+ I  FSL +GFA
Sbjct: 547 PPPVYNFAIIPTVHELDAYAHMKEASSHHAKAPVYRDIHMPSNTSAGLFIGAFSLALGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+  L + + +  +  +I  +F     YYIS++ +  IE+KR
Sbjct: 607 GVWHITWLAVAALLAIVATLIVRSFGDNDGYYISADTVREIEEKR 651


>gi|262375300|ref|ZP_06068533.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter lwoffii
           SH145]
 gi|262309554|gb|EEY90684.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter lwoffii
           SH145]
          Length = 662

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 475/583 (81%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 69  MLLRGFADAIMMRLQQFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNISV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVG+
Sbjct: 129 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLALGEFAATGWMAYPPLSGIEYSPGVGM 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TIIKMRAPGMKLM MPIFTWT+LCT +LI+AAFPVLT
Sbjct: 189 DYYIWALQISGLGTLLTGVNFFVTIIKMRAPGMKLMEMPIFTWTSLCTAVLIIAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY G HFFTNDLGG+ M+YVNLIW WGHPEVYIL+LP FGI+SEVV+TFS 
Sbjct: 249 ATIAMLTLDRYFGFHFFTNDLGGSPMLYVNLIWTWGHPEVYILILPAFGIYSEVVATFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYATV IT+LS++VW+HHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 309 KALFGYKSMVYATVAITVLSFVVWVHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRIVFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG++L   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ F+
Sbjct: 429 VVFGMFAGIIFYWPKMFGWRLNETWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTFD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GIL FI+Q++V + +R   +D+TGDPW+GRTLEW+TSSP 
Sbjct: 489 NPEWDPYVDIAMFGAVLVALGILCFIMQIVVGFLQRDQRLDLTGDPWDGRTLEWATSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I+  D++W  K+N   + K  K++DI MP N   G +I++F  +MGF L+
Sbjct: 549 PFYNFAHLPKINGIDTFWIEKENGVAYAKPTKYEDIHMPTNRAAGFVIAMFITVMGFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L +++FI ++I  I ++F  K +YY+ + E+  IE +R
Sbjct: 609 WHIWWLVVVTFIASIISFIVSSFTKKVDYYVPAAEVERIENER 651


>gi|359427675|ref|ZP_09218722.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. NBRC
           100985]
 gi|358236898|dbj|GAB00261.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. NBRC
           100985]
          Length = 663

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/586 (61%), Positives = 471/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITYTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW IGFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFIGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI  F++Q+IV + +R   +D TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLIAIGIACFLMQIIVGFLQRKDNMDHTGDPWDSRTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHVPDASGVDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITVLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|410863455|ref|YP_006978689.1| cytochrome-c oxidase [Alteromonas macleodii AltDE1]
 gi|410820717|gb|AFV87334.1| cytochrome-c oxidase [Alteromonas macleodii AltDE1]
          Length = 661

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 455/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 70  MLLRGFADAIMMRTQLAMATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV +SL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNVSLGLGEFAKTGWVAYPPLAGLEFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMR PGMKLM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRGPGMKLMQMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I +L +IVWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAIAILGFIVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLVLSVPVLWTLGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDEKTGKAAFWCWQIGFLLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAAFG  +IA+GI   ++QL VS++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAAFGAFVIAIGIFFQLLQLFVSFKNKEKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W  MK+    + + +K+  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFAKIPHIKDIDAWTDMKERGDSYQRPEKYTPIHMPKNTSAGVFMSMSFTLMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L ++  +  + + I   +    +YY+  +E+  +E   +
Sbjct: 610 WHIWWLAVVGLVAGIGVFIKRCYTSDVDYYVQVDEVERVEATHL 653


>gi|406947188|gb|EKD78161.1| hypothetical protein ACD_42C00019G0003 [uncultured bacterium]
          Length = 681

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/590 (62%), Positives = 456/590 (77%), Gaps = 6/590 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQAI+ GS  GYLPPEH++QIFTAHGVIMIFFVAMPL+ G++N  V
Sbjct: 74  MLLRGFSDAIMMRSQQAIAVGSHSGYLPPEHFDQIFTAHGVIMIFFVAMPLMFGLLNMAV 133

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LS W+T  GA+LV +SL +GEFA TGWL YPPLSGIA SPGVGV
Sbjct: 134 PLQIGARDVAFPYLNSLSLWLTFVGAMLVNLSLVVGEFAKTGWLAYPPLSGIAYSPGVGV 193

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+G+LLSGIN + TI+KMR PGM LM MPIFTWTALC+ IL+  AFP+ T
Sbjct: 194 DYFIWALQISGVGSLLSGINFMVTILKMRCPGMTLMKMPIFTWTALCSMILVALAFPIFT 253

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDR++G HFFT   GGN MMY+NLIW WGHPEVYIL+LP FGIFSEVV+TFS 
Sbjct: 254 ATLAMLFLDRFMGMHFFTAGHGGNAMMYINLIWAWGHPEVYILILPAFGIFSEVVATFSK 313

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT+ IT LS++VWLHHFFTMG+GA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 314 KKLFGYTSMVYATISITFLSFVVWLHHFFTMGAGADVNAFFGIATMIIAIPTGVKIFNWL 373

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F   +LWTIGF+ TF IGGM GV++++P  +F LHNS+FLVAHFHNVIIGG
Sbjct: 374 FTMYRGRITFSASMLWTIGFISTFAIGGMTGVLMSLPPVDFQLHNSVFLVAHFHNVIIGG 433

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF- 419
           V+FG  +G+ YWFPK FG++L+  WGK SFWFWL+GFYVAFMPLY LG MG+TRR+ H+ 
Sbjct: 434 VVFGYFAGVTYWFPKLFGFRLDEKWGKRSFWFWLVGFYVAFMPLYALGLMGMTRRLDHYT 493

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSS 478
             +       +AA G  +I +GIL  ++ + VS + RH   D+TGD W NGRTLEWS  S
Sbjct: 494 AGLGWHPLLIVAAVGAAIIGVGILCQLMMVYVSVKNRHAYRDVTGDAWENGRTLEWSIPS 553

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP----KDKFQDILMPKNTNIGILISIFSLIM 534
           P P YNFA  P +H  D++W MK+     P    +  + DI MP +T  G +I++FS I+
Sbjct: 554 PAPFYNFAVTPSVHSLDAFWEMKEEKAVNPNIELQSHYDDIHMPHSTATGFIIAVFSGIL 613

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           GF L+WH++ +  +  +     V+  TFN   +YY+ S+EI  IE +R+R
Sbjct: 614 GFGLIWHIFWMMGLGLVGIFATVMARTFNANTDYYLKSDEIVRIENERVR 663


>gi|444741391|dbj|BAM78183.1| bo-type quinol oxidase subunit I [Shewanella livingstonensis]
          Length = 660

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/584 (61%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLVRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTTSGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTW     N+LIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWACTWANVLIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV STF+S
Sbjct: 250 AVLGMLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVFSTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+AT  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWATGAISVLGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RF VP+LW++GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRFTVPVLWSLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYMAGFAYWFPKAMGFTLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W   A  G  +I +GI+   +QL VS+R R   +D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWLYFAVVGAFIILVGIILQFVQLYVSFRDREQNLDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +  +   D++  MK+    +  ++ +Q I MPKNT  GI ++     MGFA +
Sbjct: 550 QFYNFAQLDPVTDIDAFTDMKEKGTAYQRRETYQPIHMPKNTASGIAMAACITAMGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+ F  T ++ +   ++   +Y++  +E+  IE   +
Sbjct: 610 WHIWWLAIVGFAGTFVLFLLRAYDNDVDYFVQPDEVARIENAHL 653


>gi|406598650|ref|YP_006749780.1| cytochrome-c oxidase [Alteromonas macleodii ATCC 27126]
 gi|406375971|gb|AFS39226.1| cytochrome-c oxidase [Alteromonas macleodii ATCC 27126]
          Length = 662

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 455/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 70  MLLRGFADAIMMRTQLAMATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV +SL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNVSLGLGEFAKTGWVAYPPLAGLEFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGMKLM MPIF WT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMKLMQMPIFAWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I +L +IVWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAIAILGFIVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLILSVPVLWTLGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDEKTGKAAFWCWQIGFLLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAAFG  +IA+GI   ++QL VS++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAAFGAFVIAIGIFFQLLQLFVSFKNKEKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W  MK+    + + +K+  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFAKIPHIKDIDAWTDMKERGESYQRPEKYTPIHMPKNTSAGVFMSMSFTLMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L ++  +  + + I   +    +YY+  +E+  +E   +
Sbjct: 610 WHIWWLAVVGLVAGIGVFIKRCYTSDVDYYVQVDEVERVEATHL 653


>gi|384227890|ref|YP_005619635.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           Ak (Acyrthosiphon kondoi)]
 gi|345538830|gb|AEO08807.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           Ak (Acyrthosiphon kondoi)]
          Length = 662

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/585 (64%), Positives = 457/585 (78%), Gaps = 3/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA++MR QQ IS     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N ++
Sbjct: 68  MLFRGFVDAILMRTQQVISSAGLKGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+    A+L+ +SL IGEFA TGWL YPPLSGI  S GVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLNVSSAVLLTLSLGIGEFAQTGWLAYPPLSGIKYSSGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQIAGIGT L+G+N + TI+KMRAPGM    MP+F WT+LCTNILIV +FPVLT
Sbjct: 188 DYWIWSLQIAGIGTTLTGVNFLVTILKMRAPGMSFFKMPVFAWTSLCTNILIVISFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY   HFFTNDLGGN MMYVNLIWIWGHPEVYILVLPVFG+FSE+V+TFS 
Sbjct: 248 ITLVLLTLDRYFNFHFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPVFGVFSEIVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+GAN+NAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYVSLVWATLSITILSFIVWLHHFFTMGAGANINAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+     +LWT+GF+ITF IGGM GV+L+VP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYQGRVHMHSSMLWTLGFLITFSIGGMTGVLLSVPPADFILHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI+YWFPK FG+ L   WGK +FWFW+IGF++AF+PLY LG MG+TRR+S   
Sbjct: 428 VVFGCFAGISYWFPKLFGFVLNETWGKRAFWFWIIGFFLAFIPLYFLGLMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D    I   +AA G  LI +GI+  I+Q +VS ++R   +D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 DSEFHILLCVAAIGACLIGVGIICQIVQFLVSIKERRHNLDLTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK---FPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P YNFA IP++   D +W  KK            + DI MPKNT +G LISIFSL+ GF+
Sbjct: 548 PEYNFAIIPVVQDRDDFWKNKKEKNYNKIMNHTNYHDIHMPKNTGLGFLISIFSLLFGFS 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+  L  +SF   ++ +I N+ N  + Y I +++I  IE + 
Sbjct: 608 AVWHITWLCFLSFFAIIVSLIINSLNEDKEYTILAKDIKRIENQH 652


>gi|120596927|ref|YP_961501.1| cytochrome-c oxidase [Shewanella sp. W3-18-1]
 gi|120557020|gb|ABM22947.1| Cytochrome-c oxidase [Shewanella sp. W3-18-1]
          Length = 659

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/585 (61%), Positives = 456/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNDGGGNSMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR+SH +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRISHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  +AA G  +I +GI+   IQL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNLWIYLAAVGACIIMVGIILQFIQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    +   K +Q I MPKNT+ GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVADIDAFTDAKEKGLAYEGLKHYQPIHMPKNTSSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGLVGAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|407701820|ref|YP_006826607.1| cytochrome-c oxidase [Alteromonas macleodii str. 'Black Sea 11']
 gi|407250967|gb|AFT80152.1| cytochrome-c oxidase [Alteromonas macleodii str. 'Black Sea 11']
          Length = 662

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 455/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N I+
Sbjct: 70  MLLRGFADAIMMRTQLAMATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV +SL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNVSLGLGEFAKTGWVAYPPLAGLEFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGMKLM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMKLMQMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I +L +IVWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVYASGAIAILGFIVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLILSVPVLWTLGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDEKTGKAAFWCWQIGFLLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAAFG  +IA+GI   ++QL VS++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAAFGAFVIAIGIFFQLLQLFVSFKNKEKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W  MK+    + + + +  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFAKIPHIKDIDAWTDMKERGESYQRPENYAPIHMPKNTSAGVFMSMSFTLMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L ++  +  + + I   +    +YY+  +E+  +E   +
Sbjct: 610 WHIWWLAVVGLVAGIGVFIKRCYTSDVDYYVQVDEVERVEATHL 653


>gi|407710556|ref|YP_006794420.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia
           phenoliruptrix BR3459a]
 gi|407239239|gb|AFT89437.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia
           phenoliruptrix BR3459a]
          Length = 668

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/585 (62%), Positives = 460/585 (78%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++ S  GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLVRGFIDAVMMRLQLALAYHSP-GYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ +SL IGEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAISAILMNLSLVIGEFAQVGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ++G+GTL++ IN   TI++MRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYIWSLQLSGVGTLITAINFFVTIVRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS 
Sbjct: 247 VALALLGLDRYMGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYRTMVYATCAIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFMITF IGGM GV++A+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTIYRGRLEFSAPVLWTIGFMITFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPKAFG+KL    GKC+FW W +GFY +FMPLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYLAGFHYWFPKAFGFKLNEKLGKCAFWCWFVGFYASFMPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + +   W   AA G  LIA+G+   + Q+ VS   RK+    D TGDPW+GRTLEW+T+S
Sbjct: 487 NPAWHPWLIAAACGVALIAVGVAFQVAQVWVSVANRKKPEYRDTTGDPWDGRTLEWATAS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP +H+ D++ +MK+ +    K   ++DI MP NT+ G+ I  FSL +GFA
Sbjct: 547 PPPVYNFAIIPTVHELDAYAHMKEASSHHAKAPVYRDIHMPSNTSAGLFIGAFSLALGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+  L + + +  +  +I  +F     YYIS++ +  IE KR
Sbjct: 607 GVWHITWLAVAALLAIVATLIVRSFGDNDGYYISADTVREIEGKR 651


>gi|359800144|ref|ZP_09302695.1| ubiquinol oxidase polypeptide I [Achromobacter arsenitoxydans SY8]
 gi|359361942|gb|EHK63688.1| ubiquinol oxidase polypeptide I [Achromobacter arsenitoxydans SY8]
          Length = 658

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/583 (62%), Positives = 459/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+MISLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVALMMISLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GT LSGIN I TI++MRAPGM LM MPIFTWT+L TN+LIVAAFPVL 
Sbjct: 188 DYYLWALQISGLGTTLSGINFIVTILRMRAPGMTLMKMPIFTWTSLVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+GTHFFTND GGN+MMYVNLIWIWGHPEVYILVLP FG++SE+V+TF+ 
Sbjct: 248 ATLALLTMDRYLGTHFFTNDGGGNVMMYVNLIWIWGHPEVYILVLPAFGVYSEIVATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAKIFNWL
Sbjct: 308 KTLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R   P+LWT+GFMI FVIGGM GV+LA+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRITTPVLWTLGFMIVFVIGGMTGVMLAIPGVSFVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+ L    G+ SF+ W +GF++AFMPLY+LGF G+TRR++H++
Sbjct: 428 VVFGCIAGMIYWFPKAFGFTLNERLGRYSFYCWFVGFFLAFMPLYVLGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R+R    D+TGDPW+ RTLEWS SSP 
Sbjct: 488 NPEWQPYLLVALAGAALIMLGIWFLLQQVFVSVRQRKQNQDVTGDPWDARTLEWSISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D +W  K++   + +  K++DI MPKNT  G+ I  F L+M FAL+
Sbjct: 548 PFYNFAHVPHVDELDQFWEDKQSGKAYKRPAKYEDIHMPKNTAAGVWIGAFGLVMCFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L+I+ F+  +   I   ++   +Y++ + E+  IE   
Sbjct: 608 WHIWWLSIVGFVGMVGSFIVRAYDRDVDYWVPAAEVERIENAH 650


>gi|260773170|ref|ZP_05882086.1| cytochrome O ubiquinol oxidase subunit I [Vibrio metschnikovii CIP
           69.14]
 gi|260612309|gb|EEX37512.1| cytochrome O ubiquinol oxidase subunit I [Vibrio metschnikovii CIP
           69.14]
          Length = 686

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/585 (63%), Positives = 456/585 (77%), Gaps = 2/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DAVMMR  QA       GYLPPEHY+Q+FTAHGVIMIFFVAMP + G++N IV
Sbjct: 81  MMFRGFADAVMMRSHQAAE-SVGLGYLPPEHYDQVFTAHGVIMIFFVAMPFIVGLMNIIV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAILV ISLF+GEFA+TGWL YPPLSG   +P VGV
Sbjct: 140 PLQIGARDVAFPFLNSLSFWLFVAGAILVNISLFVGEFAATGWLAYPPLSGSEYNPWVGV 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+GIGTLL+G+N IATI++MRAPGMKLM MP+FTWT+LC N LIV AFP+LT
Sbjct: 200 DYWLWALQISGIGTLLTGVNFIATILRMRAPGMKLMQMPVFTWTSLCANALIVVAFPILT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRYIGTHFFT+D+GGN MMYVNLIW WGHPEVYIL+LP FGIFSEVV+TFS 
Sbjct: 260 VTITLLTLDRYIGTHFFTSDMGGNPMMYVNLIWAWGHPEVYILILPAFGIFSEVVATFSR 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V AT VI LLS++VWLHHFFTMG+GA+VNAFFGI TMIISIPTG KIFNWL
Sbjct: 320 KRLFGYTSLVLATAVIMLLSFVVWLHHFFTMGAGASVNAFFGIATMIISIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   + WT  F+ITF IGGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 380 FTMYKGRVEFSASMWWTFSFLITFTIGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G+ YWFPKA G+KL   WGK S   W +GF+VAFMP+Y+LGF G+TRR+S  E
Sbjct: 440 ALFGYFAGLTYWFPKATGFKLNEKWGKISCVLWSVGFFVAFMPVYVLGFNGMTRRLSSIE 499

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        IAA G  L A+G+ + + Q+ +S R R   +D TGDPWNGRTLEW+TSSPP
Sbjct: 500 NPEWAPLLWIAAAGVGLGALGVAAQVWQIFISIRDRKDNLDTTGDPWNGRTLEWATSSPP 559

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P IH  D   Y K++   + K ++++ I MPKNT  G++IS FSL+ GFA V
Sbjct: 560 PFYNFATLPKIHDRDEHHYRKEHGMAYVKPERYKQIHMPKNTWAGVVISAFSLVFGFAFV 619

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W + I+ F+  +   I  +F+  ++YY+   E+  IE   + 
Sbjct: 620 WHIWWMVIVGFVGMIGAWIAYSFDRNKDYYVPVSEVEAIETPHLE 664


>gi|33519709|ref|NP_878541.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Blochmannia
           floridanus]
 gi|33504054|emb|CAD83315.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Blochmannia
           floridanus]
          Length = 654

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/581 (65%), Positives = 452/581 (77%), Gaps = 2/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGFTDA+MMR QQ +S   S  +L P HY+Q+ TAHGVIMI F+A P V G++N IV
Sbjct: 68  MFLRGFTDAIMMRTQQTLSSIGSSEFLSPHHYDQVVTAHGVIMIIFMATPFVIGLMNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL IGEFA TGW  YPPLS    SP VGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFMVGVILINLSLGIGEFAQTGWAAYPPLSSKIYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIGT L+GIN   TI+ MRAPGM +M MP+FTWTALCTN LI+ AFP+LT
Sbjct: 188 DYWIWSIQISGIGTTLTGINFFTTILYMRAPGMLMMKMPVFTWTALCTNALIIIAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+ THFFTNDLGGN+MMY+NL W WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 248 VTIALLTFDRYLDTHFFTNDLGGNMMMYINLFWAWGHPEVYILVLPAFGIFSEVVSTFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY+++V+AT+ IT LS+ VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KQIFGYTALVWATIAITALSFCVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F+ P+LW IGF++TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGKIIFQSPMLWVIGFIVTFSIGGMTGVLLAVPGADFILHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  SGI+YWFPKAFGY L+  WGK +FWFW+IGFYVAFMPLYILGFMG+TRR+S   
Sbjct: 428 VLFGCFSGISYWFPKAFGYTLDETWGKRAFWFWIIGFYVAFMPLYILGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D         AA GT+LI  GI+   +QLI+S R RH  +D TG+PWNG TLEWSTSSPP
Sbjct: 488 DTEFSPMLITAAVGTILIGCGIICQCLQLIISIRNRHHNLDKTGNPWNGFTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDS-WWYMKKN-NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNF  IP+I+   + +WY+K N N      K+Q I MPKNT+ GILI+ FSLI GF++
Sbjct: 548 PFYNFVNIPIINNHRNIFWYIKNNKNISCNIKKYQPIHMPKNTHEGILIAFFSLIFGFSM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           +W++W   I+ F   +I  I  +FN    YYI+ +EI  IE
Sbjct: 608 IWYIWWSAILGFFGIIITWIARSFNTNTEYYITPKEIKEIE 648


>gi|227327522|ref|ZP_03831546.1| cytochrome O ubiquinol oxidase subunit I [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 578

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/559 (64%), Positives = 445/559 (79%), Gaps = 1/559 (0%)

Query: 25  GYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSG 84
           G+L   HY+QIFTAHGVIMIFFVA P V G++N  VPLQIGARDVAFPFLN+LSFW+   
Sbjct: 7   GFLNAHHYDQIFTAHGVIMIFFVATPFVVGLMNLAVPLQIGARDVAFPFLNSLSFWLFVA 66

Query: 85  GAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIAT 144
           G +L+ +SL +GEFA TGW+ YPPLSG   SPGVGVDY+IWSLQI+G+GT L+G+N  AT
Sbjct: 67  GVVLINLSLGVGEFAQTGWVAYPPLSGKEYSPGVGVDYWIWSLQISGVGTTLTGVNFFAT 126

Query: 145 IIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGN 204
           I+KMRAPGM LM MP+FTWTALCTN+LI+AAFP+LT  + L TLDRY+GTHFFTND+GGN
Sbjct: 127 ILKMRAPGMTLMKMPVFTWTALCTNVLIIAAFPILTVTIALLTLDRYLGTHFFTNDMGGN 186

Query: 205 IMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVW 264
           +MMY+NLIW WGHPEVYILVLP+FG++SEVV+TF  KRLFGY+S+V+AT+ IT+LS+IVW
Sbjct: 187 MMMYINLIWAWGHPEVYILVLPIFGVYSEVVATFCKKRLFGYTSLVWATIAITVLSFIVW 246

Query: 265 LHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITF 324
           LHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWLFTMY+GRI+    +LWT GF+ITF
Sbjct: 247 LHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIQSHSTMLWTTGFIITF 306

Query: 325 VIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPF 384
            IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGGV+FG  +GI YWFPKAFG+ L   
Sbjct: 307 TIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGGVVFGCFAGITYWFPKAFGFTLNET 366

Query: 385 WGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILS 444
           WGK +FWFW+IGF+VAFMPLYILGFMG+TRR+S   +        +A+ G +LI +G+L 
Sbjct: 367 WGKRAFWFWIIGFFVAFMPLYILGFMGMTRRLSQQINPEFHALLVVASIGAVLIGIGVLC 426

Query: 445 FIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNN 504
            +IQ  VS R RH   D+TGDPW GRTLEW+TSSP P YNFA +P I+  D++W  K+  
Sbjct: 427 QVIQFYVSIRDRHQNRDLTGDPWGGRTLEWATSSPAPFYNFAIVPHINDRDAFWEAKEKG 486

Query: 505 FKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFN 563
             + +   +++I MPKNT  G++IS FSL+ GFA++WH+W L I  F   ++  I ++FN
Sbjct: 487 EAYKRPASYEEIHMPKNTGAGVIISAFSLVFGFAMIWHIWWLAIAGFAGMIVTWIVHSFN 546

Query: 564 YKRNYYISSEEITCIEKKR 582
              +YY+  +EI  IE + 
Sbjct: 547 QDVDYYVPVKEIEQIENQN 565


>gi|392556266|ref|ZP_10303403.1| cytochrome-c oxidase [Pseudoalteromonas undina NCIMB 2128]
          Length = 662

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/584 (61%), Positives = 449/584 (76%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWFTASGAILINLSLIFGEFAKTGWVAYPPLSELTFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGM LM MPIFTW     NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMTLMKMPIFTWACTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSE+VSTF+ 
Sbjct: 250 AVLAMLTLDRYLDFHFFTNEAGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIVSTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+F+WL
Sbjct: 310 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+  WGK SFW WLIGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFVFWFPKAMGFKLDERWGKASFWCWLIGFFVAFMPLYVLGFLGMTRRLNHSN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+  IIQL VS++ R  L D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPDWNIWLYIAAVGAVIIMFGIICQIIQLYVSFKNREALDDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D+W  MK+    +  K  +  I MPKNT  G+LI+       FA++
Sbjct: 550 QYYNFAEIPHVDDIDTWTDMKEKGLAYQGKSSYSPIHMPKNTASGVLIAASLTAFCFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  + FI  + + I   +    +YY+ ++EI  IE   I
Sbjct: 610 WHIWWLAGLGFIGAIALFINRAYTSDVDYYVQNDEILQIEGAHI 653


>gi|386393885|ref|ZP_10078666.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio sp. U5L]
 gi|385734763|gb|EIG54961.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio sp. U5L]
          Length = 661

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/585 (60%), Positives = 455/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G+S G+LPP+H+NQ+F+AHG IMI F+AMP ++G++N +V
Sbjct: 68  MLLRGFSDAIMMRGQQAMALGASQGFLPPDHFNQVFSAHGTIMILFLAMPFLSGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN +S W+   GA+LVM+SL +GEF+  GW GY PL+  A SP  GV
Sbjct: 128 PQQIGARDVAFPFLNAVSLWLAVAGALLVMVSLGVGEFSKAGWSGYAPLTERAYSPDTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+G+GTL +GIN + TI+KMRAPGM LM MP+FTWT+L TN+LIV +FP+LT
Sbjct: 188 DYWLWALQISGLGTLFTGINFLVTILKMRAPGMTLMRMPLFTWTSLLTNVLIVFSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFTN+LGGN MMYVNL W WGHPEVYI++LP FGIFSEVV TFSS
Sbjct: 248 VALALLSLDRYLGMHFFTNELGGNSMMYVNLFWTWGHPEVYIVILPAFGIFSEVVPTFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+VYAT VI LLS+ VW+HHFFTMG+ ANVN FFGI+TMII IPTG K+FNWL
Sbjct: 308 KKLFGYTSLVYATAVIMLLSFSVWVHHFFTMGASANVNIFFGISTMIIGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R   PILWTIGF+ TFVIGG+ GV+++VP AN+++HNSLFL+AHFHN++I G
Sbjct: 368 FTMYRGRVRITTPILWTIGFLTTFVIGGLTGVLMSVPPANYVVHNSLFLIAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKA G++L   WG+ SFWFWL GFY+AFMPLYILGFMG+ RRM HF+
Sbjct: 428 TLFGFFAGYAYWFPKAVGFRLNETWGRRSFWFWLTGFYLAFMPLYILGFMGMPRRMQHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +   AA GT LI  GI   +IQL VS+R R    D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPDWQPYLIAAACGTALILAGIACTLIQLYVSFRDRQANRDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
            VYNFA IP +H  D++W MK+    + + D+++DI+MPKNT  G +I + + + GFA++
Sbjct: 548 AVYNFATIPEVHDRDAFWDMKERGLAYRRPDRYEDIVMPKNTGHGFVIGVLAFVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++W L + SF+     VI  + +      I + E+  IE  R+R
Sbjct: 608 WYIWWLALGSFLAIAATVIARSIDDDGYAIIPAAEVERIETLRLR 652


>gi|114561411|ref|YP_748924.1| cytochrome-c oxidase [Shewanella frigidimarina NCIMB 400]
 gi|114332704|gb|ABI70086.1| Cytochrome-c oxidase [Shewanella frigidimarina NCIMB 400]
          Length = 660

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/584 (61%), Positives = 453/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLVRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTTSGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTW     N+LIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWACTWANVLIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV STF+S
Sbjct: 250 AVLGMLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVFSTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+AT  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWATGAISVLGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RF VP+LW++GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRFTVPVLWSLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++  +
Sbjct: 430 AVFGYMAGFAYWFPKAMGFTLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINQTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W   A  G  +I +GI+   +QL VS+R R   +D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWLYFAVVGAFIILVGIILQFVQLYVSFRDREQNLDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +  +   D++  MK+    +  ++ +Q I MPKNT  GI ++     MGFA +
Sbjct: 550 QFYNFAQLDPVTDIDAFTDMKEKGTAYQRRETYQPIHMPKNTASGIAMAACITAMGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+ F  T ++ +   ++   +Y++  +E+  IE   +
Sbjct: 610 WHIWWLAIVGFAGTFVLFLLRAYDNDVDYFVQPDEVARIENAHL 653


>gi|410613228|ref|ZP_11324296.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola psychrophila
           170]
 gi|410167370|dbj|GAC38185.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola psychrophila
           170]
          Length = 661

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/584 (61%), Positives = 457/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLIRGFSDAILMRTQQAMATSGAEGYLPPEHYDQIFTAHGVIMIIFMAMPFMVGLMNLVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAIL+ ISLF+GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILINISLFVGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N +AT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFLATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + T+DRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 250 AVLAMLTMDRYLDFHFFTNEGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+ VI++L ++VWLHHFFTMGS ANVNAFFG+ TMII+IPTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGVISILGFVVWLHHFFTMGSSANVNAFFGVATMIIAIPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LW++GFM+TF IGGM G++LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWSLGFMVTFTIGGMTGILLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G +YWFPKA G+KL    GK +FW W +GFY+AFMPLY+LGF+G+TRR+SH +
Sbjct: 430 AVFGYMAGFSYWFPKAMGFKLNERLGKIAFWCWQVGFYIAFMPLYVLGFLGMTRRLSHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +A  G  +I +GI+   +QL VS+R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWIYLAGIGASIILVGIVLQFVQLYVSFRDREQNRDLTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P++   D++  MK+    + +  K+  I MPKNT  G+LIS+     GF  +
Sbjct: 550 QFYNFAKLPVVSDIDAFTDMKEKGEAYQRHQKYSPIHMPKNTVSGMLISMSVTAAGFGAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+  L I+  +    + +   +    +YY+  EEI  IE   +
Sbjct: 610 WHINWLVIVGMLGAFGLFLQRAYTSDVDYYVQPEEIEKIENAHL 653


>gi|343492822|ref|ZP_08731172.1| cytochrome o ubiquinol oxidase subunit I [Vibrio nigripulchritudo
           ATCC 27043]
 gi|342826763|gb|EGU61174.1| cytochrome o ubiquinol oxidase subunit I [Vibrio nigripulchritudo
           ATCC 27043]
          Length = 693

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/584 (63%), Positives = 459/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF+DAV+MR QQA+    + GYLPPEHY+QIFTAHGVIMIFFVAMP + G++N IV
Sbjct: 81  MMFRGFSDAVLMRSQQALDTIDA-GYLPPEHYDQIFTAHGVIMIFFVAMPFIVGLMNVIV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAIL+ +SLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 140 PLQIGARDVAFPFLNSLSFWLFVVGAILINLSLFVGEFAATGWLAYPPLSGMEYSPWVGV 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+GIGTLL+G+N + TI++MRAPGMKLM MP+FTWT+LC N LIV AFP+LT
Sbjct: 200 DYWLWSLQISGIGTLLTGVNFVVTILRMRAPGMKLMQMPVFTWTSLCANALIVVAFPILT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRYIGTHFFTND+GGN+MMYVNLIW WGHPEVYIL+LP FGIFSEV +TFS 
Sbjct: 260 VTLTLLTLDRYIGTHFFTNDMGGNVMMYVNLIWAWGHPEVYILILPAFGIFSEVCATFSR 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT VI L+S+IVWLHHFFTMG+GA+VNAFFGI TMIISIPTG KIFNWL
Sbjct: 320 KRLFGYTSLVWATAVIMLMSFIVWLHHFFTMGAGASVNAFFGIATMIISIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   + WT  F++TF IGGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 380 FTMYKGRVEFTASMWWTCAFLVTFTIGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKA G+KL   WGK S   W +GF+VAFMP+Y+LGF G+TRR++  +
Sbjct: 440 ALFGYFAGFTYWFPKATGFKLNEKWGKISCVLWTVGFFVAFMPVYVLGFNGMTRRLATID 499

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        IAA G  +IA+G+ + + Q+ +S R R   +D TGDPWN RTLEW+TSSPP
Sbjct: 500 NPEWAPLLWIAACGVGIIALGVAAQVWQIFISIRDRKDNMDTTGDPWNARTLEWATSSPP 559

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P IH  D   Y K++   + K D+++ I MP+NT  G++IS FSL+ GFA V
Sbjct: 560 AFYNFATLPKIHDRDEHQYRKEHGMAYQKPDRYKRIHMPRNTWAGVVISAFSLVFGFAFV 619

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W + I SF+  ++  I  +F   ++Y++   E+  IE   +
Sbjct: 620 WHIWWMVIASFLGMVVSWIAYSFQRNKDYFVEVSEVEAIEGPHL 663


>gi|77361153|ref|YP_340728.1| ubiquinol oxidase subunit 1 [Pseudoalteromonas haloplanktis TAC125]
 gi|76876064|emb|CAI87286.1| Ubiquinol oxidase polypeptide I (Cytochrome o subunit 1) (Oxidase
           BO(3) subunit 1) (Cytochrome o ubiquinol oxidase subunit
           1) (Ubiquinol oxidase chain A) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 667

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/583 (60%), Positives = 449/583 (77%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N IV
Sbjct: 70  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIIV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GAIL+ +SL  GEFA TGW+ YPPLS +  S GVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAILINLSLIFGEFAKTGWVAYPPLSELTFSAGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGM LM MP+FTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMSLMKMPVFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTNDLGGN MMY+NL W WGHPEVYILVLP FG+FSE++STF+S
Sbjct: 250 AVLAMLTLDRYLDFHFFTNDLGGNAMMYINLFWAWGHPEVYILVLPAFGVFSEIISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SM+YA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMIYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRITVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL   WGK +FW W+IGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLNEGWGKGAFWCWIIGFFVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+  +IQL VS+R R  L D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPDWNIWLYIAAVGAIIIMFGIICQVIQLYVSFRDREALDDATGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D+W  MK+    +  K  +  I MPKNT+ G+L++       FA++
Sbjct: 550 QAYNFAQIPHVDDIDAWTDMKEKGQAYQGKISYSPIHMPKNTSAGVLMAASLTAFCFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L     +  + I I   +    +YY+  +E+  IE+  
Sbjct: 610 WHIWWLAAAGLVGGIAIFIKRCYASDVDYYVQPDEVARIEQAH 652


>gi|386311893|ref|YP_006008058.1| cytochrome o ubiquinol oxidase subunit I [Shewanella putrefaciens
           200]
 gi|319424518|gb|ADV52592.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella putrefaciens
           200]
          Length = 659

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/585 (61%), Positives = 455/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYMDFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR+SH +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRISHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  +AA G  +I +GI+   IQL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNLWIYLAAVGACIIMVGIILQFIQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    +   K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVADIDAFTDAKEKGLAYQGLKHYQPIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGLVGAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|359437698|ref|ZP_09227753.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20311]
 gi|358027637|dbj|GAA64002.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20311]
          Length = 662

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/584 (61%), Positives = 449/584 (76%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWFTASGAILINLSLIFGEFAKTGWVAYPPLSELTFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGM LM MPIFTW     NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMTLMKMPIFTWACTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSE+VSTF+ 
Sbjct: 250 AVLAMLTLDRYLDFHFFTNEAGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIVSTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+F+WL
Sbjct: 310 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+  WGK SFW WLIGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFVFWFPKAMGFKLDERWGKASFWCWLIGFFVAFMPLYVLGFLGMTRRLNHSN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+  +IQL VS++ R  L D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPDWNIWLYIAAVGAVIIMFGIICQVIQLYVSFKNREALDDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D+W  MK+    +  K  +  I MPKNT  G+LI+       FA++
Sbjct: 550 QYYNFAEIPHVDDIDTWTDMKEKGLAYQGKSSYSPIHMPKNTASGVLIAASLTAFCFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  + FI  + + I   +    +YY+ ++EI  IE   I
Sbjct: 610 WHIWWLAGLGFIGAIALFINRAYTSDVDYYVQNDEILQIEGAHI 653


>gi|359445301|ref|ZP_09235045.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20439]
 gi|358040867|dbj|GAA71294.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas sp.
           BSi20439]
          Length = 618

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/584 (61%), Positives = 449/584 (76%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 26  MLFRGFSDAIMMRAQLALATSGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVV 85

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 86  PLQIGARDVAFPFLNNLSFWFTASGAILINLSLIFGEFAKTGWVAYPPLSELTFSPGVGV 145

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGM LM MPIFTW     NILI A+FP+LT
Sbjct: 146 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMTLMKMPIFTWACTWANILIAASFPILT 205

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSE+VSTF+ 
Sbjct: 206 AVLAMLTLDRYLDFHFFTNEAGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIVSTFTG 265

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+F+WL
Sbjct: 266 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFSWL 325

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 326 FTIYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 385

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+  WGK SFW WLIGF+VAFMPLY+LGF+G+TRR++H  
Sbjct: 386 AVFGYLAGFVFWFPKAMGFKLDERWGKASFWCWLIGFFVAFMPLYVLGFLGMTRRLNHSN 445

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I  GI+  IIQL VS++ R  L D TGDPWNG TLEWSTSSPP
Sbjct: 446 NPDWNIWLYIAAVGAVIIMFGIICQIIQLYVSFKNREALDDTTGDPWNGHTLEWSTSSPP 505

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D+W  MK+    +  K  +  I MPKNT  G+LI+       FA++
Sbjct: 506 QYYNFAEIPHVDDIDTWTDMKEKGLAYQGKSSYSPIHMPKNTASGVLIAASLTAFCFAMI 565

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  + FI  + + I   +    +YY+ ++EI  IE   I
Sbjct: 566 WHIWWLAGLGFIGAIALFINRAYTSDVDYYVQNDEILQIEGAHI 609


>gi|402565523|ref|YP_006614868.1| cytochrome-c oxidase [Burkholderia cepacia GG4]
 gi|402246720|gb|AFQ47174.1| cytochrome-c oxidase [Burkholderia cepacia GG4]
          Length = 670

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/587 (61%), Positives = 455/587 (77%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+    N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVAFFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL +GEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAAILMNISLVLGEFAQVGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TIIKMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYLWALQISGVGTLITSINFFVTIIKMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+  HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV+STF+ 
Sbjct: 247 VALALLGLDRYLDMHFFTNDAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVISTFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +L+++VWLHHFFTMGSGA+VNAFFGI TM+I+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMVIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F VP+LWTIGFM+TF +GGM GV+LA+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRVEFTVPVLWTIGFMVTFTLGGMTGVMLAIPGADFVLHNSLFLIAHFHNTIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+++WFPK FG+KL+   GK +FW WL GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYFAGVHFWFPKVFGFKLDEQQGKRAFWCWLTGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AA G +LIA+G++  +  + V +R R+     D TGDPWNGRTLEW+TSS
Sbjct: 487 NPAWHPWLVVAACGVVLIALGVVFQVASVWVGWRNRNQPQYRDATGDPWNGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP VYNFA +P +H+ D   Y K         K   ++DI MP NT+ G  + IFSL++G
Sbjct: 547 PPAVYNFAVLPNVHELDELAYRKAKGLGLGLGKNVRYEDIHMPSNTSAGFFVGIFSLLLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FALVWH+W L I + +  +  V+  +      YYI ++ +  IE++R
Sbjct: 607 FALVWHIWWLAIAALVGIVATVVLYSAQDNDGYYIPADTVRKIEEQR 653


>gi|407009772|gb|EKE24844.1| hypothetical protein ACD_6C00021G0002 [uncultured bacterium]
          Length = 662

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/583 (63%), Positives = 474/583 (81%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 69  MLVRGFADAIMMRLQQFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNISV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVG+
Sbjct: 129 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLALGEFAATGWMAYPPLSGIEYSPGVGM 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TIIKMRAPGMKLM MPIFTWT+LCT +LI+AAFPVLT
Sbjct: 189 DYYIWALQISGLGTLLTGVNFFVTIIKMRAPGMKLMEMPIFTWTSLCTAVLIIAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY G HFFTNDLGG+ M+YVNLIW WGHPEVYILVLP FGI+SEVV+TFS 
Sbjct: 249 ATIAMLTLDRYFGFHFFTNDLGGSPMLYVNLIWTWGHPEVYILVLPAFGIYSEVVATFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYATV IT+LS++VW+HHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 309 KALFGYKSMVYATVAITVLSFVVWVHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRIVYTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GI +++PK FG++L   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ F+
Sbjct: 429 VVFAMFAGIIFYWPKMFGWRLNETWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTFD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI+ FI+Q++V + +R   +D+TGDPW+GRTLEW+TSSP 
Sbjct: 489 NPEWDPYVNIAMFGAVLIALGIVCFILQIVVGFLQRDQRLDLTGDPWDGRTLEWATSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I+  D++W  K+N   + K  K++D+ MP N   G +I++F  +MGF L+
Sbjct: 549 PFYNFAHLPKINGIDTFWIEKENGVAYAKPTKYEDVHMPTNRAAGFVIAMFITVMGFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L +++FI ++I  I ++F  K +YY+ + E+  IE +R
Sbjct: 609 WHIWWLVVVTFIASIISFIVSSFTKKVDYYVPAAEVERIENER 651


>gi|34499450|ref|NP_903665.1| cytochrome o ubiquinol oxidase subunit I [Chromobacterium violaceum
           ATCC 12472]
 gi|34105302|gb|AAQ61657.1| cytochrome o ubiquinol oxidase, subunit I [Chromobacterium
           violaceum ATCC 12472]
          Length = 680

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/585 (60%), Positives = 452/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G + G  PPEHY+QIFTAHGVIMI F+AMP +TG++N +V
Sbjct: 69  MLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+     ILV +SL +G FA TGW+ YPPL+ +  SP VGV
Sbjct: 129 PLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSPDVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+ IN + T+IKMRAPGMKLM+MPIFTWT    N+LI  +FP+LT
Sbjct: 189 DYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L +  LDRY+  HFFT +LGGN MMY+NL W WGHPEVYILVLP FGIFSEVVSTF+ 
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGANVNAFFGI TMIISIPTG K+FNWL
Sbjct: 309 KRLFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RFE PILWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 369 FTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G+++WFPK FG+KL    GK SFWFW IGF  AFMPLY+LGF+G+TRR++H +
Sbjct: 429 AVFGYLAGVSFWFPKVFGFKLNDKLGKASFWFWQIGFMFAFMPLYVLGFLGMTRRLNHTD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + + W  IA FG LLIA GI   ++Q++VS R R  L+D TGDPWNG TLEWSTSSP 
Sbjct: 489 NPAWEPWLYIALFGALLIAAGIACQLLQIVVSIRDRKKLVDETGDPWNGHTLEWSTSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H  D++  MK+    +   K ++ I MP+NT +G+ I  F+ ++GFAL+
Sbjct: 549 PFYNFAKLPQVHDIDAFTDMKEKGVAYAVPKSYEPIHMPRNTAVGVYIGAFTTVLGFALI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+  +  +  ++   ++   +YY+  +E+  IE+ R  
Sbjct: 609 WHIWWLAIVGLVGIVGCMLARAYDNDLDYYVQPDEVEAIERARFE 653


>gi|421481611|ref|ZP_15929194.1| ubiquinol oxidase subunit I [Achromobacter piechaudii HLE]
 gi|400199926|gb|EJO32879.1| ubiquinol oxidase subunit I [Achromobacter piechaudii HLE]
          Length = 658

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/585 (62%), Positives = 459/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAVASADSAGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G  L+MISLF+GEFA+TGWL YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLFGAGVALMMISLFVGEFAATGWLAYPPLSGLDYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT LSGIN I TI++MRAPGM LM MPIFTWT+L TN+LIVAAFPVL 
Sbjct: 188 DYYIWALQISGLGTTLSGINFIVTILRMRAPGMSLMKMPIFTWTSLVTNVLIVAAFPVLA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+GTHFFTND+GGN+MMYVNLIWIWGHPEVYILVLP FG++SEVV+TF+ 
Sbjct: 248 ATLALLTADRYLGTHFFTNDMGGNVMMYVNLIWIWGHPEVYILVLPAFGVYSEVVATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS++VWLHHFFTMG+GANVNAFFGI TMIISIPTGAKIFNWL
Sbjct: 308 KTLFGYKSMVYATAAIGVLSFLVWLHHFFTMGAGANVNAFFGIATMIISIPTGAKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R   P+LWT+GFMI FVIGGM GV+LA+P  +F+LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYRGRLRITTPVLWTLGFMIVFVIGGMTGVMLAIPGVSFVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+ L    G+ SF+ W +GF++AFMPLYILGF G+TRR++H++
Sbjct: 428 VVFGCIAGMTYWFPKAFGFTLNERLGRYSFYCWFVGFFMAFMPLYILGFKGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  LI +GI   + Q+ VS R+R    D+TGDPW+GRTLEW+ SSP 
Sbjct: 488 NPEWQPYLLVALAGAALIMLGIWFLLQQVFVSVRQRKQNQDVTGDPWDGRTLEWAISSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P + + D +W  K++   + +  K++DI MPKNT  G+ I +F L+M FAL+
Sbjct: 548 PFYNFAHVPHVEELDQFWEDKQSGKAYKRPAKYEDIHMPKNTGAGVYIGLFGLVMCFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I  F+  +   I   ++   +Y++ + E+  IE     
Sbjct: 608 WHIWWLAIAGFVGMIGSFIARAYDRDVDYWVPAAEVERIENAHFE 652


>gi|374705885|ref|ZP_09712755.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. S9]
          Length = 672

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/583 (61%), Positives = 461/583 (79%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ G+LPPEHY+QIFTAHGVIMI F+AMP + G++N  V
Sbjct: 68  MLLRGFADAIMMRGQLAMAEGANHGFLPPEHYDQIFTAHGVIMIIFMAMPFMVGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAILV +SL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAILVNLSLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N + T++KMR PGMKLM MPIFTWT   TNILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTLLTGVNFLVTVLKMRTPGMKLMQMPIFTWTCTFTNILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+AT  IT+L ++VWLHHFFTMGSGANVNAFFG+ TMIISIPTG K+FNWL
Sbjct: 308 KRLFGYTSMVWATAAITVLGFVVWLHHFFTMGSGANVNAFFGVATMIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT++RGR+ F  P+LWT+GFM+TF +GGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 368 FTIFRGRLHFTTPVLWTLGFMVTFTVGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+KL+   GKC+FW W+ GF+VAFMPLY+LGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFTFWFPKAFGFKLDERLGKCAFWCWITGFFVAFMPLYVLGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG +LI  GI   I Q++VS + R  L D TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWHPYLIVAFFGAVLIFCGIAFQIAQILVSIKNRDALRDHTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H  D++  MK+N+  + +   +  I MPKNT  G++I +   + GFA++
Sbjct: 548 PFYNFAQLPTVHAVDAFHEMKENDTAYLRPASYSPIHMPKNTAAGLVIGLIGAVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W +  +SFI  +   I  ++N   +YY+  +EI  IE +R
Sbjct: 608 WHIWWMAGLSFIGMVATFIVRSYNQDVDYYVQPDEIERIENQR 650


>gi|71892025|ref|YP_277755.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796131|gb|AAZ40882.1| cytochrome o ubiquinol oxidase, subunit I [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 653

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/581 (64%), Positives = 451/581 (77%), Gaps = 2/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR QQA+S   S+ +L   HYNQ+ TAHGVIMI F+A P V G++N +V
Sbjct: 68  MFVRGFADAIMMRAQQALSSSGSYEFLSAYHYNQVITAHGVIMIIFMATPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL IGEFA TGW GYPPLS    SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFMVGVILMNLSLGIGEFAQTGWSGYPPLSSKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIGT L+GIN   TI+ MRAPG+ +M MP+FTWTALCTN LI+AAFP+LT
Sbjct: 188 DYWIWSIQISGIGTTLTGINFFTTILYMRAPGLSMMKMPVFTWTALCTNTLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTNDLGGN+MMY+NL W WGHPEVYILVLPVFG+FSE+VSTFS 
Sbjct: 248 ITIALLTLDRYLGTHFFTNDLGGNMMMYINLFWAWGHPEVYILVLPVFGVFSEIVSTFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+++AT+ IT+LS+ VWLHHFFTMG+GANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KKLFGYTSLIWATIAITVLSFCVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F  P++WTIGF+ITF IGGM GV+L+VP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGKIVFSSPMMWTIGFIITFAIGGMTGVLLSVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFGY L   WGK +FWFW+IGFY+AFMPLYILGFMG+TRR+S   
Sbjct: 428 VLFGCFAGTTYWFPKAFGYVLNEKWGKRAFWFWIIGFYIAFMPLYILGFMGMTRRLSQHI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D         A+ GT+LI +GI+   IQ+IVS   R    DI G+PWNG TLEW+ SSPP
Sbjct: 488 DPIFSSMLITASMGTILIGLGIMCQCIQIIVSIVNRDKHKDINGNPWNGSTLEWAVSSPP 547

Query: 481 PVYNFAFIPLIHQS-DSWWYMKKN-NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA IP+I+   D +WY++ N N     D+FQ I MPKNT  GI+IS F+L  GF +
Sbjct: 548 PFYNFAIIPIINNDRDVFWYVQNNRNIYSCPDQFQSIHMPKNTYSGIVISFFALTFGFGM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           +W++W L + S    +   I +TFN    YY+  E+I  IE
Sbjct: 608 IWYIWWLVVFSMFGIIATWILHTFNDDTEYYVPVEKIKEIE 648


>gi|410626470|ref|ZP_11337231.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola mesophila KMM
           241]
 gi|410154009|dbj|GAC24000.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola mesophila KMM
           241]
          Length = 645

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 51  MLIRGFSDAIMMRTQLALATNGAQGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 110

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+ + GA+L+ ISL +GEFA TGWL YPPLS ++ SPGVGV
Sbjct: 111 PLQIGARDVAFPFMNNLSFWLAAAGAVLINISLGLGEFAKTGWLAYPPLSEMSFSPGVGV 170

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N +AT+ KMRAPGMKLM MPIFTW     NILIVA+FP+LT
Sbjct: 171 DYYIWALQISGIGTLLTGVNFLATVFKMRAPGMKLMQMPIFTWACTWANILIVASFPILT 230

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 231 AVLGLLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 290

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L ++VWLHHFFTMGS A+VNAFFG+ TMII+IPTG K+FNWL
Sbjct: 291 KRLFGYTSMVWASGAISILGFVVWLHHFFTMGSSADVNAFFGVMTMIIAIPTGVKLFNWL 350

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFLVAHFHN IIGG
Sbjct: 351 FTMYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLVAHFHNTIIGG 410

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  +WFPKA G+ L    GK SFW W IGFYVAFMPLY+LGF+G+TRR++H  
Sbjct: 411 AVFGYMAGFAFWFPKATGFHLNERLGKYSFWCWQIGFYVAFMPLYVLGFLGMTRRLNHTN 470

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G L+I +GI+   +QL VS R R    D+ GDPWNG TLEWST+SPP
Sbjct: 471 NPDWNIWLYIAAVGALIIFVGIILQFVQLYVSIRDREQNPDVDGDPWNGHTLEWSTASPP 530

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  D++  MK+   ++   D++  I MP+NT  G+ I+  + I+GFAL+
Sbjct: 531 QFYNFAVLPKVHDIDAFTDMKEKGIEYQAPDEYMPIHMPRNTAAGMQIAGAAGIVGFALI 590

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+  +  ++ +I   +    +YY+  +E+  IE+  +
Sbjct: 591 WHIWWLAIVGTLGMVVALIARCYAKDVDYYVEPQEVAEIERAHL 634


>gi|440509819|ref|YP_007347255.1| Ubiquinol oxidase subunit 1 [Candidatus Blochmannia chromaiodes
           str. 640]
 gi|440454032|gb|AGC03524.1| Ubiquinol oxidase subunit 1 [Candidatus Blochmannia chromaiodes
           str. 640]
          Length = 653

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/582 (63%), Positives = 453/582 (77%), Gaps = 4/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR QQA+S   S+ +L   HYNQ+ TAHGVIMI F+A P V G++N +V
Sbjct: 68  MFVRGFADAIMMRAQQALSSSGSYEFLSAYHYNQVITAHGVIMIIFMATPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL IGEFA TGW GYPPLS    SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFMVGVILMNLSLGIGEFAQTGWSGYPPLSSKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIGT L+GIN   TI+ MRAPG+ +M MP+FTWTALCTN LI+AAFP+LT
Sbjct: 188 DYWIWSIQISGIGTTLTGINFFTTILYMRAPGLSMMKMPVFTWTALCTNTLIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTNDLGGN+MMY+NL W WGHPEVYILVLPVFG+FSE+VSTFS 
Sbjct: 248 ITIALLTLDRYLGTHFFTNDLGGNMMMYINLFWAWGHPEVYILVLPVFGVFSEIVSTFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+++AT+ IT+LS+ VWLHHFFTMG+GANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KKLFGYTSLIWATIAITVLSFCVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F  P++WTIGF+ITF IGGM GV+L+VP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGKIVFSSPMMWTIGFIITFSIGGMTGVLLSVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFGY L   WGK +FWFW+IGFY+AFMPLYILGFMG+TRR+S   
Sbjct: 428 VLFGCFAGTTYWFPKAFGYVLNEKWGKRAFWFWIIGFYIAFMPLYILGFMGMTRRLSQHI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D         A+ GT+LI +GI+   IQ+IVS   R    DI G+PWNG TLEW+ SSPP
Sbjct: 488 DPIFSSMLVTASMGTILIGLGIMCQCIQIIVSIVNRDKHKDINGNPWNGSTLEWAVSSPP 547

Query: 481 PVYNFAFIPLIHQS-DSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P YNFA IP+I+   D +WY++ N   +  P D+FQ I MPKNT  GI+IS F+L  GF 
Sbjct: 548 PFYNFAIIPIINNDRDVFWYVQNNRKIYSCP-DQFQSIHMPKNTYSGIVISFFALTFGFG 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           ++W++W L + S +  +   I +TFN    YY+  E+I  IE
Sbjct: 607 MIWYIWWLVVFSMLGIIATWILHTFNNDTEYYVPVEKIKEIE 648


>gi|333892062|ref|YP_004465937.1| cytochrome-c oxidase [Alteromonas sp. SN2]
 gi|332992080|gb|AEF02135.1| cytochrome-c oxidase [Alteromonas sp. SN2]
          Length = 662

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/584 (60%), Positives = 452/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLLRGFADAIMMRTQLAVATNGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLNNLSFW+T+GGAIL+ ISL IGEFA TGW+ YPP++G+  SPGVGV
Sbjct: 130 PLQIGARDVAYPFLNNLSFWLTAGGAILINISLGIGEFAKTGWVAYPPIAGLELSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+ +N + T+ KMRAPGMKLM MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMKLMQMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF++
Sbjct: 250 AVLAMLTLDRYLDFHFFTNEAGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTA 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYA+  I +L ++VWLHHFFTMGS ANVNAFFGI TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVYASGAIAILGFVVWLHHFFTMGSSANVNAFFGIMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+   VP+LW +GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLVLSVPVLWALGFMVTFTIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+KL+   GK +FW W IGF +AF+PLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYLAGFAFWFPKAMGFKLDERTGKAAFWCWQIGFMMAFLPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    +W  IAA G  +IA+GI   ++QL +S++ +  L D TGDPWNG TLEWST+SPP
Sbjct: 490 NPDWNLWLYIAAVGAFVIALGIFFQLLQLFISFKNKDKLNDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D+W   K+    + K +K+  I MPKNT+ G+ +S+   +MGFAL+
Sbjct: 550 QFYNFANIPHIKDIDAWTDTKERGDSYQKPEKYAPIHMPKNTSAGVFMSMSCTVMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  +  I  + + I   +    +YY+  +EI  IE   +
Sbjct: 610 WHIWWLAAVGLIAGIGVFIKRCYTSDVDYYVQVDEIEKIEHAHL 653


>gi|357417826|ref|YP_004930846.1| cytochrome O ubiquinol oxidase subunit I [Pseudoxanthomonas spadix
           BD-a59]
 gi|355335404|gb|AER56805.1| cytochrome O ubiquinol oxidase subunit I [Pseudoxanthomonas spadix
           BD-a59]
          Length = 666

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/583 (61%), Positives = 458/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+  G + G+LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAIMMRMQLAMGHGGNEGFLPPHHYDQIFTAHGVIMIFFMAMPFITGLMNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+M+SLF+GEFA TGWL +PPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGVVLMMLSLFVGEFAQTGWLAFPPLSELQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT L+G+N +ATI KMRAPGM LM MPIFTWTAL TNIL++AAFP LT
Sbjct: 188 DYYIWALQISGLGTTLTGVNFVATIFKMRAPGMTLMRMPIFTWTALITNILMIAAFPFLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DRY+GTHFFTND GGN MMY+N+IWIWGHPEVYIL+LP FG+FSEVVSTFS 
Sbjct: 248 ISLALLTADRYLGTHFFTNDGGGNAMMYINMIWIWGHPEVYILILPCFGVFSEVVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMV+AT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMII++PTG KIFNWL
Sbjct: 308 KPLFGYTSMVWATSAIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIIAVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI     + WT+GF++TF IGGM GV++A+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRIEMTSMMYWTVGFIVTFTIGGMTGVMMAIPAVSFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG + G+ YW+PKAFG+KL    GK SFW W++GF++AFMPLY+LGF+G+TRR++ + 
Sbjct: 428 VVFGCLCGLTYWWPKAFGFKLVDKLGKASFWCWIVGFFIAFMPLYVLGFLGMTRRLNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     W  +AA G ++IA GI   IIQ+  S  KR+   D+TGDPW+GRTLEW++SSP 
Sbjct: 488 NPEWVPWLYVAACGAVIIACGIALNIIQIGWSIWKRNDNRDLTGDPWDGRTLEWASSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D  W  K+    + +   ++DI MP+NT+IG+ +  F +++GF +V
Sbjct: 548 PFYNFAHLPKVTGRDQHWADKQAGTAYQRPTHYEDIHMPRNTSIGVFMGAFGVLLGFGMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W + I+  +  +   I  TF+   +YY+ + E+  IE  R
Sbjct: 608 WHIWWMAIVGLVGMIGSYIVRTFDEDTDYYVPAAEVARIENAR 650


>gi|21230617|ref|NP_636534.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66769387|ref|YP_244149.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|188992574|ref|YP_001904584.1| Cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. campestris str. B100]
 gi|21112198|gb|AAM40458.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66574719|gb|AAY50129.1| cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|167734334|emb|CAP52544.1| Cytochrome O ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. campestris]
          Length = 666

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 456/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++     G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGNGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGVNFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATACIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFSIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNERLGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I +GI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAAGAAIIGLGIFLNLVQIAYSVWKRKDNMDHTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +   ++ I MP+NT  G+ I+ FS+++GF L 
Sbjct: 548 PFYNFAVLPHIDDRDQFWGDKQNGKGWVRPSSYEPIHMPRNTGAGVYIAAFSVLLGFGLT 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L II     +   I  +F+   +Y++ +EE+  IE  R
Sbjct: 608 WHIWWLAIIGLAGMIGSFIARSFDDDIDYWVPAEEVKRIEDAR 650


>gi|73538405|ref|YP_298772.1| cytochrome-c oxidase [Ralstonia eutropha JMP134]
 gi|72121742|gb|AAZ63928.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Ralstonia
           eutropha JMP134]
          Length = 659

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/583 (62%), Positives = 451/583 (77%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+ G + GYLPP HY+QIFTAHGVIMIFFVA P + G++N IV
Sbjct: 68  MLLRGFADAIMMRTQQAIAVGEAAGYLPPHHYDQIFTAHGVIMIFFVATPFILGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWM++ GA+LVM+S+F+G+FA+TGW+ YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAFPFVNSLSFWMSAVGAVLVMMSMFVGDFAATGWVAYPPLSGLGYSPTVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GT L+GIN IATI++MRAPGM LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWSLQISGLGTTLTGINFIATILRMRAPGMNLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+  HFFTN+LGGN MMYVNLIWIWGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLDMHFFTNELGGNAMMYVNLIWIWGHPEVYVLILPCFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGANVNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGANVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    LWTIGFM+TF IGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHSSTLWTIGFMVTFAIGGMTGVLLAVPGADFVLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++ +++WFPK FG++L  FWGK SFW WLIGF +AF+PLY LG  G+TRRM+H+ 
Sbjct: 428 VVFGCLAAMSFWFPKVFGFRLNEFWGKVSFWCWLIGFCLAFLPLYGLGMKGMTRRMNHYV 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q W  +A  G L+I  GIL+ + Q+ VS R R    D+TGDPWN R+LEWST SP 
Sbjct: 488 NPEWQPWLIVAMIGALIIGAGILALLWQIYVSVRDREQNRDLTGDPWNARSLEWSTPSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   +  W  K+    +    +++DI MP+ T  G ++S+F L++ F  V
Sbjct: 548 PHYNFAIVPNITSLEQHWDDKEAGRAWQAPARYEDIHMPRPTAAGFIVSMFGLVLCFGFV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L        +   I  +++   +YY+ +EE+   E+ R
Sbjct: 608 WHIWWLAGAGLAGMIATFIARSYDRDVDYYVPAEEVERTERAR 650


>gi|384427048|ref|YP_005636406.1| cytochrome o ubiquinol oxidase subunit I [Xanthomonas campestris
           pv. raphani 756C]
 gi|341936149|gb|AEL06288.1| cytochrome o ubiquinol oxidase, subunit I [Xanthomonas campestris
           pv. raphani 756C]
          Length = 666

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/583 (63%), Positives = 456/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++     G LPP HY+QIFTAHGVIMIFF+AMP +TG++N IV
Sbjct: 68  MLLRGFADAAMMRTQQALAGNGGEGVLPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA L+ ISL +GEFA TGWL YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFVAGAALINISLGVGEFAQTGWLAYPPLSGLEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 188 DYYIWALQVSGLGTLLTGVNFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++T+S 
Sbjct: 248 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATYSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS++VWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 308 KRLFGYTSMVYATACIGVLSFVVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGF+ITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMFRGRVHMTSPVLWTIGFIITFSIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W+IGF+VAFMPLY+LGFMG+TRRM+ + 
Sbjct: 428 VVFGYLAGLTYWFPKAFGFKLNEKLGKASFWCWIIGFFVAFMPLYVLGFMGMTRRMNTYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I +GI   ++Q+  S  KR   +D TGDPW+GRTLEW+TSSPP
Sbjct: 488 HPEWAPWLYVAAAGAAIIGLGIFLNLVQIAYSVWKRKDNMDHTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K+N   + +   ++ I MP+NT  G+ I+ FS+++GF L 
Sbjct: 548 PFYNFAVLPHIDDRDQFWGDKQNGKGWVRPSSYEPIHMPRNTGAGVYIAAFSVLLGFGLT 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+     +   I  +F+   +Y++ +EE+  IE  R
Sbjct: 608 WHIWWLAIVGLAGMIGSFIARSFDDDIDYWVPAEEVKRIEDAR 650


>gi|167585490|ref|ZP_02377878.1| Cytochrome-c oxidase [Burkholderia ubonensis Bu]
          Length = 670

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/587 (62%), Positives = 454/587 (77%), Gaps = 6/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+++    GYLPP HY+QIFTAHGVIMIFF+AM L+    N IV
Sbjct: 68  MLLRGFADAVMMRLQLALAYNGP-GYLPPHHYDQIFTAHGVIMIFFMAMALLVAFFNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWMTAVAAILMNISLVIGEFAQVGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTL++ IN   TIIKMRAPGM LM MP+FTWTALC+N+LI+A FP+L 
Sbjct: 187 DYYLWALQISGVGTLITSINFFVTIIKMRAPGMTLMKMPVFTWTALCSNVLIMATFPILA 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+  HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TF+ 
Sbjct: 247 VALALLGLDRYLDMHFFTNDAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +L+++VWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 307 KPLFGYKTMVYASCAIMVLAFLVWLHHFFTMGSGADVNAFFGIMTMIIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+LWTIGFM+TF +GGM GV+LA+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRVEFTAPVLWTIGFMVTFTLGGMTGVMLAIPGADFVLHNSLFLIAHFHNTIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+++WFPK FG+KL+   GK +FW WL GFYVAFMPLY+LGFMG+TRR++H++
Sbjct: 427 VVFGYFAGVHFWFPKVFGFKLDEKQGKRAFWCWLTGFYVAFMPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSS 478
           + +   W  +AA G +LIA+G++  +  + V +R R      D+TGDPWNGRTLEW+TSS
Sbjct: 487 NPAWHPWLLVAACGVVLIALGVVFQVASVWVGWRNRAQAQYRDVTGDPWNGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMG 535
           PP VYNFA IP +H+ D   Y K         K   +QDI MP NT+ G+ + +FSL++G
Sbjct: 547 PPAVYNFAVIPDVHELDELAYRKAKGLGIGLGKNVTYQDIHMPSNTSAGLFVGVFSLLLG 606

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FALVWH+W L I S +  +  V+  +      YYI ++ +  IE++R
Sbjct: 607 FALVWHIWWLAIASLVGIVATVVLYSAQDNEGYYIPADTVRKIEEQR 653


>gi|410641992|ref|ZP_11352510.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola chathamensis
           S18K6]
 gi|410138309|dbj|GAC10697.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola chathamensis
           S18K6]
          Length = 664

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQLAMATNGAAGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+ + GA+L+ ISL +GEFA TGWL YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFMNNLSFWLAAAGAVLINISLGLGEFAKTGWLAYPPLSEMSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N +AT+ KMRAPGMKLM MPIFTW     NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTLLTGVNFLATVFKMRAPGMKLMQMPIFTWACTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 250 AVLGLLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L ++VWLHHFFTMGS A+VNAFFG+ TMII+IPTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFVVWLHHFFTMGSSADVNAFFGVMTMIIAIPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFLVAHFHN IIGG
Sbjct: 370 FTMYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLVAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  +WFPKA G+ L    GK SFW W IGFYVAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYMAGFAFWFPKATGFHLNERLGKYSFWCWQIGFYVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I +GI+   +QL VS R R    D+ GDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAALGAVIIFVGIVLQFVQLYVSIRDRKQNPDVDGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  D++  MK+   ++   D++  I MP+NT  G+ I+  + I+GFAL+
Sbjct: 550 QFYNFAVLPKVHDIDAFTDMKEKGIEYQAPDEYMPIHMPRNTAAGMQIAGAAGIVGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+  +  ++ +I   +    +YY+  +E+  IE+  +
Sbjct: 610 WHIWWLAIVGSLGMVVALIARCYAKDVDYYVEPQEVAEIERAHL 653


>gi|109897616|ref|YP_660871.1| cytochrome-c oxidase [Pseudoalteromonas atlantica T6c]
 gi|109699897|gb|ABG39817.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein
           [Pseudoalteromonas atlantica T6c]
          Length = 664

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQLAMATNGAEGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+ + GA+L+ ISL +GEFA TGWL YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFMNNLSFWLAAAGAVLINISLGLGEFAKTGWLAYPPLSEMSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N +AT+ KMRAPGMKLM MPIFTW     NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTLLTGVNFLATVFKMRAPGMKLMQMPIFTWACTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 250 AVLGLLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L ++VWLHHFFTMGS A+VNAFFG+ TMII+IPTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFVVWLHHFFTMGSSADVNAFFGVMTMIIAIPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFLVAHFHN IIGG
Sbjct: 370 FTMYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLVAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  +WFPKA G+ L    GK SFW W IGFYVAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYMAGFAFWFPKATGFHLNERLGKYSFWCWQIGFYVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I +GI+   +QL VS R R    D+ GDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAALGAVIIFVGIILQFVQLYVSIRDREQNPDVDGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  D++  MK+   ++   D++  I MP+NT  G+ I+  + ++GFAL+
Sbjct: 550 QFYNFAVLPKVHDIDAFTDMKEKGIEYQAPDEYMPIHMPRNTAAGMQIAGAAGVVGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+  +  ++ +I   +    +YY+  +E+  IE+  +
Sbjct: 610 WHIWWLAIVGSLGMVVALIARCYAKDVDYYVEPQEVAEIERAHL 653


>gi|149189687|ref|ZP_01867969.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio shilonii AK1]
 gi|148836499|gb|EDL53454.1| cytochrome o ubiquinol oxidase, subunit I [Vibrio shilonii AK1]
          Length = 678

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/573 (63%), Positives = 454/573 (79%), Gaps = 6/573 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DAVMMR QQ +S     GYLPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFSDAVMMRSQQLLSSAGEAGYLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW+   G IL  +SL +GEF  TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPYLNNLSFWLFIVGVILTNLSLGVGEFGRTGWLAYPPLSGIDASPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQI+G+GT L+G+N  ATI++MR P M LM MP+FTW +LC NILI+ +FP+L 
Sbjct: 188 DYWIWALQISGVGTTLTGVNFFATILRMRTPSMPLMKMPVFTWASLCANILIIISFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+G HFFTND GGN+MMYVNLIW WGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 248 VTIALLTLDRYLGMHFFTNDFGGNMMMYVNLIWAWGHPEVYILVLPIFGVFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT+ IT+L+++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYTSLVWATIAITILAFVVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GF+ITF +GGM GV++AVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 368 FTMYKGRVRFTTPMLWTLGFLITFSVGGMTGVLMAVPGADFVLHNSVFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  + I YWFPKA G+ +   WGK +F+ W+IGF +AF+PLY LGFMG+TRR+S  +
Sbjct: 428 VVFGCFAAITYWFPKATGFMMNETWGKRAFYLWIIGFLMAFLPLYALGFMGMTRRLS--Q 485

Query: 421 DISLQIW--FQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
           DI+ + +    +AA GT +IA+G++   IQ+ VS R R   +D+TGDPW GRT EW+TSS
Sbjct: 486 DINPEYFPLLAVAAAGTAVIALGVVCQFIQIYVSVRDRKAHLDLTGDPWGGRTFEWATSS 545

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P   Q D++WY K++    P  K ++Q I MPKNT  GI IS ++L  GF
Sbjct: 546 PPPFYNFAHLPKGDQIDAFWYQKESGEFDPMKKVEYQRIHMPKNTPTGIYISAWALAFGF 605

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYY 569
            ++W+MW L  ISF+  ++  I +++N   +YY
Sbjct: 606 GMIWYMWWLAAISFVGIVVSCIKHSYNDDVDYY 638


>gi|400405836|ref|YP_006588695.1| cytochrome o ubiquinol oxidase subunit I [secondary endosymbiont of
           Ctenarytaina eucalypti]
 gi|400364199|gb|AFP85267.1| cytochrome o ubiquinol oxidase, subunit I [secondary endosymbiont
           of Ctenarytaina eucalypti]
          Length = 664

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/583 (63%), Positives = 461/583 (79%), Gaps = 2/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     G+LPP HY+QI TAHGVIMI F+A P V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQMLASAGESGFLPPHHYDQIVTAHGVIMIIFMATPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+  SL IGEFA TGW+ YPPL+G   SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFIVGVILINASLGIGEFAQTGWVAYPPLAGKEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QIAGIGT L+GIN   TI++MRAP M +M MP+FTW ALCTNILI+AAFP+LT
Sbjct: 188 DYWIWSIQIAGIGTTLTGINFFTTILRMRAPSMPMMKMPVFTWAALCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMYVNL W WGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 VTIILLTLDRYLGTHFFTNDMGGNMMMYVNLFWAWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT+ IT+LS+ VWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATIAITVLSFCVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   +LWTIGF+ TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRLVFNSAMLWTIGFVTTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFGY L   WGKC+FWFW+IGFY+AFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGYTLNETWGKCAFWFWIIGFYIAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +      +AA G  LIA+GIL  +IQ+IVS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 EPAFHPLLTVAAAGAGLIALGILCQVIQIIVSVRDREKNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQS-DSWWYMKKNNFKFPKDKFQDIL-MPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P +++  D++W MK+    + +    D++ MPKNT  G++I+ FSL+  FAL
Sbjct: 548 PFYNFAIVPEVNKHLDAFWKMKEKGTAYKQPLAYDLIHMPKNTGSGVIIAAFSLLFCFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +W++W L I+ F   +I  + ++FN   +Y + ++E+  IE +
Sbjct: 608 IWYIWWLAILGFSGMIITWVLHSFNEDVSYDVPAKEVERIENR 650


>gi|332307458|ref|YP_004435309.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola sp.
           4H-3-7+YE-5]
 gi|332174787|gb|AEE24041.1| cytochrome o ubiquinol oxidase, subunit I [Glaciecola sp.
           4H-3-7+YE-5]
          Length = 664

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/584 (61%), Positives = 456/584 (78%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQLAMATNGAAGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+ + GA+++ ISL +GEFA TGWL YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFMNNLSFWLAAAGAVMINISLGLGEFAKTGWLAYPPLSEMSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N +AT+ KMRAPGMKLM MPIFTW     NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTLLTGVNFLATVFKMRAPGMKLMQMPIFTWACTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 250 AVLGLLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L ++VWLHHFFTMGS A+VNAFFG+ TMII+IPTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFVVWLHHFFTMGSSADVNAFFGVMTMIIAIPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFLVAHFHN IIGG
Sbjct: 370 FTMYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLVAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  +WFPKA G+ L    GK SFW W IGFYVAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYMAGFAFWFPKATGFHLNERLGKYSFWCWQIGFYVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I +GI+   +QL VS R R    D+ GDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLCIAALGAVIIFVGIVLQFVQLYVSIRDRKQNPDVDGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  D++  MK+   ++   D++  I MP+NT  G+ I+  + I+GFAL+
Sbjct: 550 QFYNFAVLPKVHDIDAFTDMKEKGIEYQAPDEYMPIHMPRNTAAGMQIAGAAGIVGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+  +  ++ +I   +    +YY+  +E+  IE+  +
Sbjct: 610 WHIWWLAIVGSLGMVVALIARCYAKNVDYYVEPQEVAEIERAHL 653


>gi|410647298|ref|ZP_11357733.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola agarilytica
           NO2]
 gi|410133153|dbj|GAC06132.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola agarilytica
           NO2]
          Length = 664

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/586 (61%), Positives = 457/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q A++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQLAMATNGAAGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+ + GA+L+ ISL +GEFA TGWL YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFMNNLSFWLAAAGAVLINISLGLGEFAKTGWLAYPPLSEMSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N +AT+ KMRAPGMKLM MPIFTW     NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTLLTGVNFLATVFKMRAPGMKLMQMPIFTWACTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 250 AVLGLLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L ++VWLHHFFTMGS A+VNAFFG+ TMII+IPTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFVVWLHHFFTMGSSADVNAFFGVMTMIIAIPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFLVAHFHN IIGG
Sbjct: 370 FTMYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLVAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  +WFPKA G+ L    GK SFW W IGFYVAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYMAGFAFWFPKATGFHLNERLGKYSFWCWQIGFYVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I +GI+   +QL VS R R    D+ GDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAALGAVIIFVGIVLQFVQLYVSIRDRKQNPDVDGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  D++  MK+   ++   D++  I MP+NT  G+ I+  + I+GFAL+
Sbjct: 550 QFYNFAVLPKVHDIDAFTDMKEKGIEYQAPDEYMPIHMPRNTAAGMQIAGAAGIVGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L I+  +  ++ +I   +    +YY+  +E+  IE+  + +
Sbjct: 610 WHIWWLAIVGSLGMVVALIARCYAKDVDYYVEPQEVVEIERAHLAI 655


>gi|170724799|ref|YP_001758825.1| cytochrome o ubiquinol oxidase subunit I [Shewanella woodyi ATCC
           51908]
 gi|169810146|gb|ACA84730.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella woodyi ATCC
           51908]
          Length = 661

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 450/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N IV
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLIV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+G HFFTN  GGN MMY+NL W WGHPEVYIL+LP FGIFSE++STF+S
Sbjct: 250 AVLAMLTLDRYLGFHFFTNAGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEIISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMTTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+KL    GK +FW W +GFYVAFMPLY+LGF+G+TRR+ H +
Sbjct: 430 AVFGYLAGFAYWFPKAMGFKLNERLGKAAFWCWQVGFYVAFMPLYVLGFLGMTRRIGHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     W  +AA G  +I  GI+   +QL VS+R R   +D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPDWNFWIYLAAIGAFIILAGIILQFVQLYVSFRDREQNLDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P +   D +  MK+    + + D ++ I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKDPHVSDIDCFTDMKEKGEAYQRHDAYEPIHMPKNTASGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+  L I   +   ++ +   ++   +YY+  +E+  IE   +
Sbjct: 610 WHILWLAIAGILGAFVVFLCRAYSNDHDYYVQPDEVARIENAHL 653


>gi|239906126|ref|YP_002952865.1| cytochrome o ubiquinol oxidase subunit I [Desulfovibrio magneticus
           RS-1]
 gi|239795990|dbj|BAH74979.1| cytochrome o ubiquinol oxidase subunit I [Desulfovibrio magneticus
           RS-1]
          Length = 661

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/585 (58%), Positives = 462/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G+S G+LPP+H+NQ+F+AHG IMI F+AMP ++G++N ++
Sbjct: 68  MLLRGFSDAIMMRAQQAMAVGASPGFLPPDHFNQVFSAHGTIMILFMAMPFLSGLMNIVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN +S W++  GA+LVM+SL +GEF+  GW GY PL+ +A SP  GV
Sbjct: 128 PQQIGARDVAFPFLNAVSLWLSVAGALLVMVSLGVGEFSKAGWSGYTPLTELAYSPDTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WS+QI+G+GTLL+GIN + TIIKMRAPGM LM MP+FTWTAL TNILI+ AFP+LT
Sbjct: 188 DYWLWSIQISGVGTLLTGINFLVTIIKMRAPGMTLMRMPLFTWTALLTNILIIFAFPMLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LF+ +LDRY+G HFFTNDLGGN MMY+NL W WGHPEVYI++LP FGI+SEVV+TFS 
Sbjct: 248 AALFMLSLDRYLGMHFFTNDLGGNTMMYINLFWTWGHPEVYIVILPAFGIYSEVVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+S+VYAT VI  LS+ VW HHFFTMG+ ANVN FFGI+TM+I+IPTG K+FNWL
Sbjct: 308 KRIFGYTSLVYATAVIMFLSFAVWAHHFFTMGTSANVNIFFGISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R   P+LWTIGF+ TFV+GG+ GV++++P A+++LHNSLFL+AHFHN++I G
Sbjct: 368 FTMYKGRVRMTTPMLWTIGFLTTFVLGGLTGVLMSIPPADYVLHNSLFLIAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPKA G+KL+  WGK SFW WLIGFY++F+PLY+LGFMG+ RRM H++
Sbjct: 428 TLFGFLAGFAYWFPKATGFKLDETWGKRSFWCWLIGFYMSFVPLYVLGFMGMPRRMQHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q+   IAA GTL+IA GI   ++QL VS+ KR    D TGDPW+GRTLEW+T+SPP
Sbjct: 488 NPAWQLPLIIAAVGTLIIAAGIGCMLMQLFVSFMKRKANADTTGDPWDGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
            VYNFA IP +H  D++W MK+    + + D ++DI+MPKN+  G ++ + + + GFA++
Sbjct: 548 AVYNFAVIPEVHDIDAFWDMKERGVAYARPDHYEDIVMPKNSWHGFVLGVVAFVFGFAVI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  ++ +  + +V            I +EE+  IE  R+R
Sbjct: 608 WHIWWLAAVTTLGMIAVVTARGCADDLFMVIPAEEVARIEDARVR 652


>gi|330502490|ref|YP_004379359.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas mendocina
           NK-01]
 gi|328916776|gb|AEB57607.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas mendocina
           NK-01]
          Length = 662

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/584 (60%), Positives = 459/584 (78%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR   A++ G   GYLPPEHY+QIFTAHG+IM+ FVAMPLVTG++N +V
Sbjct: 68  MLVRGFADAIMMRTHLAMAHGDGQGYLPPEHYDQIFTAHGIIMLIFVAMPLVTGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+  GGA+L+ +SL +GEFA TGW+ YPPLSGI  SPGVG+
Sbjct: 128 PLQIGARDVAFPYLNSLSFWLFVGGALLINLSLGLGEFAKTGWVAYPPLSGIQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWS+Q++G+GT L+G+N IATI+KMRAPGM LM MPIFTWT L T +LI  AFP LT
Sbjct: 188 DYYIWSMQLSGLGTTLTGVNFIATILKMRAPGMSLMKMPIFTWTILVTCVLICGAFPPLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+  HFFTN+LGGN MMY NL WIWGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 248 ATLAMLSLDRYLDFHFFTNELGGNPMMYANLFWIWGHPEVYILILPAFGVFSEVVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY+SMV+AT  I +LS++VWLHHFFTMGSGA+VNAFFGI T II+IPTG KIF WL
Sbjct: 308 KTLFGYASMVWATAAIGVLSFVVWLHHFFTMGSGASVNAFFGIMTSIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT++RGR++       T+GF++TF IGGM GV++AVPAA+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTIFRGRLQLNAMTWMTLGFLVTFSIGGMTGVLMAVPAADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++GI YWFPKAFG+KL   +G+ SFW WLIGFY AFMPLY+LGFMG+TRR++HF+
Sbjct: 428 AVFGYLAGIIYWFPKAFGFKLLDRFGRYSFWCWLIGFYFAFMPLYVLGFMGMTRRLNHFD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W Q+A  G +LI +GI+  ++Q + SY KR   +D++GDPW+GRTLEW+TSSPP
Sbjct: 488 NPAWVPWVQVAVVGAVLIGIGIVFTVVQFVTSYIKRKENVDVSGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA IP   + D+++  KKN  +     + ++ I MPKNT  G+++S F +  GFA+
Sbjct: 548 PFYNFAVIPTADKIDAFYEAKKNGVELMPAPEHYEPIHMPKNTGNGLVVSAFVIAFGFAM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +WH+W L I+  +  ++  I  +++   +YY+  EEI  IE+  
Sbjct: 608 IWHIWWLAIVGLVGAVVSFIVRSYDEDIDYYVQPEEIARIEQAH 651


>gi|430808640|ref|ZP_19435755.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus sp. HMR-1]
 gi|429498967|gb|EKZ97438.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus sp. HMR-1]
          Length = 658

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/585 (61%), Positives = 454/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+ G + GYLPP HY+QIFTAHGVIMIFFVA P + G++N IV
Sbjct: 68  MLLRGFADAIMMRTQQAIAVGETAGYLPPHHYDQIFTAHGVIMIFFVATPFILGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PF+N+LSFW+++ GA+LVMIS+F+G+FA+TGW+ YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFVNSLSFWLSAIGAVLVMISMFVGDFAATGWVAYPPLSGLEYSPTVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT L+GIN I TI++MRAPG+ LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWALQISGLGTTLTGINFIVTILRMRAPGLTLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+  HFFT++LGGN MMYVNLIWIWGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLDMHFFTSELGGNAMMYVNLIWIWGHPEVYVLILPCFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGA+VNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGASVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHSSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++ +++WFPK FG+ L  FWGK +FW WLIGFY+AFMPLY LG MG+TRRM+H+ 
Sbjct: 428 VVFGCLAAMSFWFPKVFGFTLNEFWGKVAFWCWLIGFYLAFMPLYALGLMGMTRRMNHYT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  +I  GIL+ + QL VS R R+   D+TGDPW+GR+LEW+T+SP 
Sbjct: 488 NPEWQPYLIVALVGACIIGAGILAILWQLYVSVRDRNQNRDLTGDPWDGRSLEWATASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   +  W  K     + +  +++DI MP+NT+ G L+S+F L+  F  V
Sbjct: 548 PFYNFAHVPNITSLEQHWEDKDTGRAYAQPARYEDIHMPRNTSAGFLVSVFGLVFCFGFV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +        +   I   ++   +YY+ + E+  IE+ R +
Sbjct: 608 WHIWWMVGFGLAAMIFTFIARAYDRDVDYYVPAAEVERIERARFQ 652


>gi|32490897|ref|NP_871151.1| hypothetical protein WGLp148 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166103|dbj|BAC24294.1| cyoB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 654

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/586 (63%), Positives = 460/586 (78%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR  QAI+   + G+L P HY+QI TAHGVIMI F+A P + G++N IV
Sbjct: 68  MMIRGFADAIMMRSHQAIASSGNEGFLTPHHYDQIITAHGVIMIIFMATPFIVGLMNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL IGEFA TGW  YPPLS I  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFMVGVVLINLSLGIGEFAQTGWAAYPPLSEITYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIGT L+GIN  ATI+KMRAP M +M MP+FTWT+ CTNILI+AAFP+LT
Sbjct: 188 DYWIWSIQISGIGTTLTGINFFATILKMRAPNMPMMKMPVFTWTSFCTNILIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             +FL TLDRY+ THFFTND+GGN+MMY+NL W WGHPEVYILVLPVFGIFSEVV+TFS 
Sbjct: 248 VTIFLLTLDRYLNTHFFTNDMGGNMMMYINLFWAWGHPEVYILVLPVFGIFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY S+V+AT+ ITLLS+ VWLHHFFTMGSG+NVNAFFGI TMII+IPTG K+FNW+
Sbjct: 308 KSLFGYKSLVFATIAITLLSFCVWLHHFFTMGSGSNVNAFFGIMTMIIAIPTGVKVFNWI 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRI+F   +LWTIGF+ITF IGGM GV+L+VP A+F+LHNSLFL+ HFHNVIIGG
Sbjct: 368 FTMYHGRIKFHSSMLWTIGFIITFSIGGMTGVLLSVPGADFVLHNSLFLIGHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YWFPKAFG+KL+  WGK +FW W++GFY+AFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWFPKAFGFKLDEMWGKRAFWLWIVGFYIAFMPLYFLGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D    I   IAAFGT LI++G++  +IQ++VS + +    D TGDPWNGRTLEWS  SPP
Sbjct: 488 DKIYHIPLSIAAFGTFLISLGVVCQVIQILVSVKNKSKNKDHTGDPWNGRTLEWSIPSPP 547

Query: 481 PVYNFAFIPLIHQS-DSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFAL 538
           PVYNFA IP  ++  DS+W++K N     K   +  I MPKNT+ GI IS F+LI GF++
Sbjct: 548 PVYNFAKIPNAYKVLDSFWFIKNNKNNKQKIFSYSPIHMPKNTSAGIFISGFALIFGFSM 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VWH+W ++++    ++I  I+ +F    +YYIS + I  IE K I 
Sbjct: 608 VWHIWWMSLLGIAGSIITWIFYSFKKDIDYYISIKTIHEIESKNIN 653


>gi|167031865|ref|YP_001667096.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida GB-1]
 gi|166858353|gb|ABY96760.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas putida GB-1]
          Length = 672

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/585 (60%), Positives = 449/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTAPMLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFWL GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWLSGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQL VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQLYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D+W   K+    + P  KF  I MP NT+ G+ + +F  + GFA +
Sbjct: 548 PFYNFAHMPEQVGLDAWHETKETGKAYKPATKFDAIHMPSNTSTGLFMGLFLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 608 WHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|410620495|ref|ZP_11331366.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola polaris LMG
           21857]
 gi|410159980|dbj|GAC35504.1| cytochrome o ubiquinol oxidase subunit I [Glaciecola polaris LMG
           21857]
          Length = 664

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/584 (61%), Positives = 455/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR Q AI+   S GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRAQLAIATNGSEGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+NNLSFW+T+ GA+L+ ISL +GEFA TGWL YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFMNNLSFWLTASGAVLINISLGLGEFAKTGWLAYPPLSEMSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTLLTGVNFLVTVFKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEV+STF+ 
Sbjct: 250 AVLGLLTLDRYLDFHFFTNDGGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L ++VWLHHFFTMGS A+VNAFFG+ TMII+IPTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFVVWLHHFFTMGSSADVNAFFGVMTMIIAIPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFLVAHFHN IIGG
Sbjct: 370 FTMYRGRLRITVPVLWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLVAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG M+G  +WFPKA G+ L    GK SFW W +GFYVAFMPLY+LGF+G+TRR++H  
Sbjct: 430 AVFGYMAGFAFWFPKATGFHLNERLGKYSFWCWQVGFYVAFMPLYVLGFLGMTRRLNHTN 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G ++I +GI+   +QL VS R R    D+ GDPWNG TLEWST+SPP
Sbjct: 490 NPDWNIWLYIAALGAVIIFVGIILQFVQLYVSIRDREQNPDLDGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  D++  MK    ++   D++  I MP+NT  G+ I+    I+GFAL+
Sbjct: 550 QFYNFATLPKVHDIDAFTDMKDKGIEYQAPDEYLPIHMPRNTAAGMQIAGALGIVGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L I+  +  ++ +I   +    +YY+  +EI  IE+  +
Sbjct: 610 WHIWWLAIVGSVGMVVALIARCYASYVDYYVEPQEIAEIEQAHL 653


>gi|94314711|ref|YP_587920.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus metallidurans
           CH34]
 gi|93358563|gb|ABF12651.1| cytochrome o ubiquinol oxidase subunit I [Cupriavidus metallidurans
           CH34]
          Length = 658

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/585 (61%), Positives = 454/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAI+ G + GYLPP HY+QIFTAHGVIMIFFVA P + G++N IV
Sbjct: 68  MLLRGFADAIMMRTQQAIAVGETAGYLPPHHYDQIFTAHGVIMIFFVATPFILGLMNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PF+N+LSFW+++ GA+LVMIS+F+G+FA+TGW+ YPPLSG+  SP VGV
Sbjct: 128 PLQIGARDVAYPFVNSLSFWLSAIGAVLVMISMFVGDFAATGWVAYPPLSGLEYSPTVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GT L+GIN I TI++MRAPG+ LM MP+FTWTAL TNILIVA FPVLT
Sbjct: 188 DYYIWALQISGLGTTLTGINFIVTILRMRAPGLTLMKMPVFTWTALITNILIVAIFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T DRY+  HFFT++LGGN MMYVNLIWIWGHPEVY+L+LP FG FSE+++TFS 
Sbjct: 248 ATLALLTADRYLDMHFFTSELGGNAMMYVNLIWIWGHPEVYVLILPCFGAFSEIIATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT  I +LS+ VWLHHFFTMGSGA+VNAFFGI T IISIPTG K+FNWL
Sbjct: 308 KPLFGYKSMVYATSSIGVLSFFVWLHHFFTMGSGASVNAFFGIMTSIISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF    LWTIGFM+TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYRGRIRFHSSTLWTIGFMVTFAVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++ +++WFPK FG+ L  FWGK +FW WLIGFY+AFMPLY LG MG+TRRM+H+ 
Sbjct: 428 VVFGCLAAMSFWFPKVFGFTLNEFWGKVAFWCWLIGFYLAFMPLYALGLMGMTRRMNHYT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +  +A  G  +I  GIL+ + QL VS R R+   D+TGDPW+GR+LEW+T+SP 
Sbjct: 488 NPEWQPYLIVALVGACIIGAGILAILWQLYVSVRDRNQNRDLTGDPWDGRSLEWATASPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   +  W  K     + +  +++DI MP+NT+ G L+S+F L+  F  V
Sbjct: 548 PFYNFAHVPNITSLEQHWEDKDTGRAYAQPARYEDIHMPRNTSAGFLVSVFGLVFCFGFV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W +        +   I   ++   +YY+ + E+  IE+ R +
Sbjct: 608 WHIWWMVGFGLAAMIFTFIARAYDRDVDYYVPAAEVERIERARFQ 652


>gi|421849312|ref|ZP_16282294.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           NBRC 101655]
 gi|421853113|ref|ZP_16285793.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           subsp. pasteurianus LMG 1262 = NBRC 106471]
 gi|371459950|dbj|GAB27497.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           NBRC 101655]
 gi|371478690|dbj|GAB30996.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           subsp. pasteurianus LMG 1262 = NBRC 106471]
          Length = 604

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/587 (61%), Positives = 453/587 (77%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG+ NFIVP
Sbjct: 10  LFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFLAMAFMTGLFNFIVP 69

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPFLNNLSFWMT+   ILV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 70  LQIGARDVAFPFLNNLSFWMTAVAFILVNVSLFIGEFSQCGWLAYPPLSENQFSPGVGVD 129

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA C +ILI+ AFPVLT 
Sbjct: 130 YYIWAVQISGVGTLLTGVNFFVTIVKMRAPGMTWMKMPVFTWTAFCASILIMVAFPVLTV 189

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY G HFFTND GGN M+Y+NLIW WGHPEVYILV+P FG+FSEVV  FS K
Sbjct: 190 AVALLGLDRYFGMHFFTNDGGGNQMLYLNLIWAWGHPEVYILVIPAFGVFSEVVPAFSGK 249

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGYS+MVYAT  I +LS++VW+HHFFTMG+G +VNAFFGI TMIISIPTG K+FNWLF
Sbjct: 250 PLFGYSTMVYATCSIMVLSFLVWVHHFFTMGAGPDVNAFFGIATMIISIPTGVKLFNWLF 309

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI+F   + W +GFMITF IGGM GV+LA+P A+F+LHNSLFL+AHFHN IIGGV
Sbjct: 310 TMYKGRIQFHACMYWAVGFMITFTIGGMTGVMLAIPGADFVLHNSLFLIAHFHNTIIGGV 369

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG + G+N+WFPK  G+KL+  WGK +FWFW +GFY AF+PLYI+GF G+TRR++H+++
Sbjct: 370 YFGYICGMNFWFPKVMGFKLDETWGKRAFWFWFVGFYCAFVPLYIVGFEGMTRRLNHYDN 429

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A  G +L+ +GI   + QL VS R R+     D+TGDPWNGRTLEWSTSSP
Sbjct: 430 PAWHPWLLVAEVGAVLVMLGIACQLTQLYVSIRDRNLPQNRDVTGDPWNGRTLEWSTSSP 489

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPVYNFA +P +H+ D++ + K+N  + +    +++ I MPKNT++G+   IF+LI GFA
Sbjct: 490 PPVYNFAIVPHVHELDAFMHDKENGIDTRQAGAQYEAIHMPKNTSLGLACGIFALIFGFA 549

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            VW++W L  I  +  +  VI  + +   +YYI +EE+  IE +  R
Sbjct: 550 AVWYIWWLAAIGLVGVIGSVIARSADKDIDYYIPAEEVARIENEHTR 596


>gi|398845936|ref|ZP_10602946.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM84]
 gi|398253058|gb|EJN38205.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM84]
          Length = 672

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/586 (60%), Positives = 451/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFMITF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTAPMLWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQL VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQLYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D+W   K+  N +K P  KF  I MP NT+ G+ + +F  + GFA 
Sbjct: 548 PFYNFAHMPEQVGLDAWHETKQTGNAYK-PAKKFDAIHMPSNTSTGLFMGLFLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|258541195|ref|YP_003186628.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384041116|ref|YP_005479860.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384049631|ref|YP_005476694.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384052741|ref|YP_005485835.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384055973|ref|YP_005488640.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384058614|ref|YP_005497742.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384061908|ref|YP_005482550.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384117984|ref|YP_005500608.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|21321320|dbj|BAB97174.1| ubiquinol oxidase subunit I [Acetobacter pasteurianus]
 gi|256632273|dbj|BAH98248.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635330|dbj|BAI01299.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638385|dbj|BAI04347.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641439|dbj|BAI07394.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644494|dbj|BAI10442.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647549|dbj|BAI13490.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650602|dbj|BAI16536.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653593|dbj|BAI19520.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 663

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/587 (61%), Positives = 453/587 (77%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG+ NFIVP
Sbjct: 69  LFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFLAMAFMTGLFNFIVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPFLNNLSFWMT+   ILV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFLNNLSFWMTAVAFILVNVSLFIGEFSQCGWLAYPPLSENQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA C +ILI+ AFPVLT 
Sbjct: 189 YYIWAVQISGVGTLLTGVNFFVTIVKMRAPGMTWMKMPVFTWTAFCASILIMVAFPVLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY G HFFTND GGN M+Y+NLIW WGHPEVYILV+P FG+FSEVV  FS K
Sbjct: 249 AVALLGLDRYFGMHFFTNDGGGNQMLYLNLIWAWGHPEVYILVIPAFGVFSEVVPAFSGK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGYS+MVYAT  I +LS++VW+HHFFTMG+G +VNAFFGI TMIISIPTG K+FNWLF
Sbjct: 309 PLFGYSTMVYATCSIMVLSFLVWVHHFFTMGAGPDVNAFFGIATMIISIPTGVKLFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI+F   + W +GFMITF IGGM GV+LA+P A+F+LHNSLFL+AHFHN IIGGV
Sbjct: 369 TMYKGRIQFHACMYWAVGFMITFTIGGMTGVMLAIPGADFVLHNSLFLIAHFHNTIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG + G+N+WFPK  G+KL+  WGK +FWFW +GFY AF+PLYI+GF G+TRR++H+++
Sbjct: 429 YFGYICGMNFWFPKVMGFKLDETWGKRAFWFWFVGFYCAFVPLYIVGFEGMTRRLNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A  G +L+ +GI   + QL VS R R+     D+TGDPWNGRTLEWSTSSP
Sbjct: 489 PAWHPWLLVAEVGAVLVMLGIACQLTQLYVSIRDRNLPQNRDVTGDPWNGRTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPVYNFA +P +H+ D++ + K+N  + +    +++ I MPKNT++G+   IF+LI GFA
Sbjct: 549 PPVYNFAIVPHVHELDAFMHDKENGIDTRQAGAQYEAIHMPKNTSLGLACGIFALIFGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            VW++W L  I  +  +  VI  + +   +YYI +EE+  IE +  R
Sbjct: 609 AVWYIWWLAAIGLVGVIGSVIARSADKDIDYYIPAEEVARIENEHTR 655


>gi|89073977|ref|ZP_01160483.1| cytochrome o ubiquinol oxidase subunit I [Photobacterium sp. SKA34]
 gi|89050305|gb|EAR55809.1| cytochrome o ubiquinol oxidase subunit I [Photobacterium sp. SKA34]
          Length = 696

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/584 (63%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA MMR QQA +  +  GYLPPEHY+QIF+AHGVIMIFFVAMP V G++N IV
Sbjct: 81  MLFRGFADAFMMRTQQAAATINGTGYLPPEHYDQIFSAHGVIMIFFVAMPFVVGLMNIIV 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAIL+ +SLFIGEFASTGWL YPPLSG+  SP VGV
Sbjct: 141 PLQIGARDVAFPFLNSLSFWLFVVGAILINMSLFIGEFASTGWLAYPPLSGMEYSPWVGV 200

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+GIGTLL+G+N + TII+MRAPGMKLM MP+FTWT+LC N LIV AFP+LT
Sbjct: 201 DYWLWALQISGIGTLLTGVNFVVTIIRMRAPGMKLMQMPVFTWTSLCANALIVLAFPILT 260

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRYIGTHFFT D+GGN+MMYVNLIW WGHPEVYIL+LP FGIFSE+ +TFS 
Sbjct: 261 VTLTLLTLDRYIGTHFFTTDMGGNVMMYVNLIWAWGHPEVYILILPAFGIFSEITATFSR 320

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT VI +LS++VWLHHFFTMG+GA+VNAFFGI TMIISIPTG KIFNWL
Sbjct: 321 KRLFGYVSLVWATAVIMILSFVVWLHHFFTMGAGASVNAFFGIATMIISIPTGVKIFNWL 380

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   + WTI F+ITF IGGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 381 FTMYKGRVEFSASMWWTIAFLITFTIGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 440

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKA G+KL+   GK S   W +GF+V FMP+Y+LGF G+TRR++  +
Sbjct: 441 ALFGYFAGFTYWFPKATGFKLDEKLGKLSCVLWTVGFFVTFMPIYVLGFSGMTRRLNVAD 500

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        I+AFG  +IA GI +   Q+ VS R R   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 501 NPEWAPLLWISAFGVFIIASGIATQFYQVYVSIRDRKKNLDLTGDPWDGRTLEWATSSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P IH  D   Y K+N   +   ++++ I MPKNT  G++IS F+L +GFA +
Sbjct: 561 AFYNFATLPKIHDRDEHHYAKENGLAYKAPERYKRIHMPKNTWAGVVISAFALTLGFAFI 620

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W + I S +  L   I  +F   ++YY+   E+  IE+  +
Sbjct: 621 WHIWWMVIASGVGILASWIAYSFERNKDYYVEVAEVEAIERAHL 664


>gi|90579542|ref|ZP_01235351.1| cytochrome o ubiquinol oxidase subunit I [Photobacterium angustum
           S14]
 gi|90439116|gb|EAS64298.1| cytochrome o ubiquinol oxidase subunit I [Photobacterium angustum
           S14]
          Length = 696

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/584 (63%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA MMR QQA +  +  GYLPPEHY+QIF+AHGVIMIFFVAMP V G++N IV
Sbjct: 81  MLFRGFADAFMMRTQQAAATINGTGYLPPEHYDQIFSAHGVIMIFFVAMPFVVGLMNIIV 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAIL+ +SLFIGEFA+TGWL YPPLSG+  SP VGV
Sbjct: 141 PLQIGARDVAFPFLNSLSFWLFVVGAILINMSLFIGEFAATGWLAYPPLSGMEYSPWVGV 200

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+GIGTLL+G+N + TII+MRAPGMKLM MP+FTWT+LC N LIV AFP+LT
Sbjct: 201 DYWLWALQISGIGTLLTGVNFVVTIIRMRAPGMKLMQMPVFTWTSLCANALIVLAFPILT 260

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRYIGTHFFT D+GGN+MMYVNLIW WGHPEVYIL+LP FGIFSE+ +TFS 
Sbjct: 261 VTLTLLTLDRYIGTHFFTTDMGGNVMMYVNLIWAWGHPEVYILILPAFGIFSEITATFSR 320

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT VI +LS++VWLHHFFTMG+GA+VNAFFGI TMIISIPTG KIFNWL
Sbjct: 321 KRLFGYVSLVWATAVIMILSFVVWLHHFFTMGAGASVNAFFGIATMIISIPTGVKIFNWL 380

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   + WTI F+ITF IGGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 381 FTMYKGRVEFSASMWWTIAFLITFTIGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 440

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKA G+KL+   GK S   W +GF+V FMP+Y+LGF G+TRR++  +
Sbjct: 441 ALFGYFAGFTYWFPKATGFKLDEKLGKLSCVLWTVGFFVTFMPIYVLGFSGMTRRLNVAD 500

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        I+AFG  +IA GI +   Q+ VS R R   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 501 NPEWAPLLWISAFGVFIIASGIATQFYQVYVSIRDRKKNLDLTGDPWDGRTLEWATSSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P IH  D   Y K+N   +   ++++ I MPKNT  G++IS F+L +GFA V
Sbjct: 561 AFYNFATLPKIHDRDEHHYAKENGLAYKAPERYKRIHMPKNTWAGVVISAFALTLGFAFV 620

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W + I S +  L   I  +F   ++YY+   E+  IE+  +
Sbjct: 621 WHIWWMVIASGVGILASWIVYSFERNKDYYVEVAEVEAIERAHL 664


>gi|388598543|ref|ZP_10156939.1| cytochrome o ubiquinol oxidase subunit I [Vibrio campbellii DS40M4]
          Length = 696

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/584 (63%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA MMR QQA +  +  GYLPPEHY+QIF+AHGVIMIFFVAMP V G++N IV
Sbjct: 81  MLFRGFADAFMMRTQQAAATINGTGYLPPEHYDQIFSAHGVIMIFFVAMPFVVGLMNIIV 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAIL+ +SLFIGEFA+TGWL YPPLSG+  SP VGV
Sbjct: 141 PLQIGARDVAFPFLNSLSFWLFVVGAILINMSLFIGEFAATGWLAYPPLSGMEYSPWVGV 200

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+GIGTLL+G+N + TII+MRAPGMKLM MP+FTWT+LC N LIV AFP+LT
Sbjct: 201 DYWLWALQISGIGTLLTGVNFVVTIIRMRAPGMKLMQMPVFTWTSLCANALIVLAFPILT 260

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRYIGTHFFT D+GGN+MMYVNLIW WGHPEVYIL+LP FGIFSE+ +TFS 
Sbjct: 261 VTLTLLTLDRYIGTHFFTTDMGGNVMMYVNLIWAWGHPEVYILILPAFGIFSEITATFSR 320

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT VI +LS++VWLHHFFTMG+GA+VNAFFGI TMIISIPTG KIFNWL
Sbjct: 321 KRLFGYTSLVWATAVIMILSFVVWLHHFFTMGAGASVNAFFGIATMIISIPTGVKIFNWL 380

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   + WTI F+ITF IGGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 381 FTMYKGRVEFTASMWWTIAFLITFTIGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 440

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKA G+KL+   GK S   W +GF+V FMP+Y+LGF G+TRR++  +
Sbjct: 441 ALFGYFAGFTYWFPKATGFKLDEKLGKLSCVLWTVGFFVTFMPIYVLGFSGMTRRLNVAD 500

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        I+AFG  +IA GI +   Q+ VS R R   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 501 NPEWAPLLWISAFGVFIIASGIATQFYQVYVSIRDRKKNLDLTGDPWDGRTLEWATSSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P IH  D   Y K+N   +   + ++ I MPKNT  G++IS F+L +GFA V
Sbjct: 561 AFYNFATLPKIHDRDEHHYAKENGLAYIAPEHYKRIHMPKNTWAGVVISAFALSLGFAFV 620

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W + I S +  L   I  +F   ++YY+   E+  IE+  +
Sbjct: 621 WHIWWMVIASSVGILASWIAYSFERNKDYYVEVAEVEAIERAHL 664


>gi|262369762|ref|ZP_06063090.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter johnsonii
           SH046]
 gi|262315830|gb|EEY96869.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter johnsonii
           SH046]
          Length = 662

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/583 (63%), Positives = 472/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 69  MLLRGFADAIMMRLQLFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNISV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M SL IGEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 129 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMASLAIGEFAATGWMAYPPLSGIEYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TIIKMRAPGM LM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 189 DYYIWALQISGLGTLLTGVNFFVTIIKMRAPGMSLMDMPIFTWTSLCTAVLIIASFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY G HFFTND+GG+ M+YVNLIW WGHPEVYILVLP FGI+SEVVSTFS 
Sbjct: 249 ATIAMLTLDRYFGFHFFTNDMGGSPMLYVNLIWTWGHPEVYILVLPAFGIYSEVVSTFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 309 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 429 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG++L+A+GI  F++Q++V Y +R+  +D+TGDPW+GRTLEW+TSSP 
Sbjct: 489 NPEWDPYIAIAFFGSVLVAIGIACFVMQIVVGYLQRNDNLDLTGDPWDGRTLEWATSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I+  D++W  K+N   + K   ++DI MP N   G++I++F  +MGF L+
Sbjct: 549 PFYNFAHLPTINGIDTFWNDKENGVAYAKPTSYEDIHMPTNRAAGVVIAMFITVMGFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L ++ FI  +I  I ++F  K +YY+ + E+  IE +R
Sbjct: 609 WHIWWLVVVMFIAAIISFIASSFTKKVDYYVPAAEVERIENER 651


>gi|329114805|ref|ZP_08243562.1| Ubiquinol oxidase subunit I [Acetobacter pomorum DM001]
 gi|326695936|gb|EGE47620.1| Ubiquinol oxidase subunit I [Acetobacter pomorum DM001]
          Length = 663

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/587 (61%), Positives = 453/587 (77%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG+ NFIVP
Sbjct: 69  LFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFLAMAFMTGLFNFIVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPFLNNLSFWMT+   ILV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFLNNLSFWMTAVAFILVNVSLFIGEFSQCGWLAYPPLSENQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA C +ILI+ AFPVLT 
Sbjct: 189 YYIWAVQISGVGTLLTGVNFFVTIVKMRAPGMTWMKMPVFTWTAFCASILIMVAFPVLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY G HFFTND GGN M+Y+NLIW WGHPEVYILV+P FG+FSEVV  FS K
Sbjct: 249 AVALLGLDRYFGMHFFTNDGGGNQMLYLNLIWAWGHPEVYILVIPAFGVFSEVVPAFSGK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGYS+MVYAT  I +LS++VW+HHFFTMG+G +VNAFFGI TMIISIPTG K+FNWLF
Sbjct: 309 PLFGYSTMVYATCSIMVLSFLVWVHHFFTMGAGPDVNAFFGIATMIISIPTGVKLFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI+F   + W +GFMITF IGGM GV+LA+P A+F+LHNSLFL+AHFHN IIGGV
Sbjct: 369 TMYKGRIQFHACMYWAVGFMITFTIGGMTGVMLAIPGADFVLHNSLFLIAHFHNTIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG + G+N+WFPK  G+KL+  WGK +FWFW +GFY AF+PLYI+GF G+TRR++H+++
Sbjct: 429 YFGYICGMNFWFPKVMGFKLDETWGKRAFWFWFVGFYCAFVPLYIVGFEGMTRRLNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A  G +L+ +GI   + QL VS R R+     D+TGDPWNGRTLEWSTSSP
Sbjct: 489 PAWHPWLLVAEVGAVLVMLGIACQLTQLYVSIRDRNLPQNRDVTGDPWNGRTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPVYNFA +P +H+ D++ + K+N  + +    +++ I MPKNT++G+   IFSLI GFA
Sbjct: 549 PPVYNFAIVPHVHELDAFMHDKENGIDTRQAGAQYEAIHMPKNTSLGLACGIFSLIFGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            VW++W L  I  +  +  VI  + +   +YYI ++E+  IE +  R
Sbjct: 609 AVWYIWWLAAIGLVGVIGSVIARSADKDIDYYIPADEVARIENEHTR 655


>gi|357633688|ref|ZP_09131566.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio sp.
           FW1012B]
 gi|357582242|gb|EHJ47575.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio sp.
           FW1012B]
          Length = 661

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/585 (60%), Positives = 457/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G+S G+LPP+H+NQ+F+AHG IMI F+AMP ++G++N IV
Sbjct: 68  MLLRGFSDAIMMRGQQAMALGASQGFLPPDHFNQVFSAHGTIMILFMAMPFLSGLMNLIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN +S W+   GA+LVM+SL +GEF+  GW GY PL+ +A SP  GV
Sbjct: 128 PQQIGARDVAFPFLNAVSLWLAVAGALLVMVSLGVGEFSKAGWSGYTPLTELAYSPDTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQI+G+GTLL+G+N + TI+KMRAPGM LM MP+FTW  L TN+LIV +FP+LT
Sbjct: 188 DYWLWSLQISGLGTLLTGVNFLVTILKMRAPGMTLMRMPLFTWNLLLTNVLIVFSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY G HFFTN+LGGN MMYVNL W WGHPEVYI+VLP FGI+SEVV+TFSS
Sbjct: 248 VALALLALDRYCGMHFFTNELGGNSMMYVNLFWTWGHPEVYIVVLPAFGIYSEVVATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+S+V+AT  I LLS+ VW+HHFFTMG+GANVN FFGI+TMII IPTG K+FNWL
Sbjct: 308 KKLFGYTSLVWATAAIMLLSFSVWVHHFFTMGAGANVNIFFGISTMIIGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R   P+LWTIGF+ TFV+GG+ GV+L+VP AN+++HNSLFL+AHFHN +I G
Sbjct: 368 FTMYRGRVRLTTPMLWTIGFLTTFVLGGLTGVLLSVPPANYVIHNSLFLIAHFHNTLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G +YWFPKA G++L   WGK SFWFWL GFY+AFMPLYILGFMG+ RRM H++
Sbjct: 428 TLFGFFAGYSYWFPKAVGFRLNETWGKRSFWFWLTGFYLAFMPLYILGFMGMPRRMQHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q    +AAFGT LI  GI   ++QL VS+R RH   D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPDWQPLLIVAAFGTALILAGIACTLVQLYVSFRDRHANRDLTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
            VYNFA IP++   D++W MK+    + + D+++DI+MPKNT  G +I + + + GFA++
Sbjct: 548 AVYNFATIPVVEDRDAFWDMKERGLAYQRPDRYEDIVMPKNTGHGFVIGVLAFVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L + SF+     +I  +F+      I + E+  IE  R+R
Sbjct: 608 WHIWWLALASFLALAATLIAKSFDDDAYAIIPAAEVERIETLRLR 652


>gi|381196507|ref|ZP_09903849.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter lwoffii
           WJ10621]
          Length = 662

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/583 (63%), Positives = 472/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 69  MLLRGFADAIMMRLQLFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNISV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M SL IGEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 129 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMASLAIGEFAATGWMAYPPLSGIEYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TIIKMRAPGM LM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 189 DYYIWALQISGLGTLLTGVNFFVTIIKMRAPGMSLMDMPIFTWTSLCTAVLIIASFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY G HFFTND+GG+ M+YVNLIW WGHPEVYILVLP FGI+SEVVSTFS 
Sbjct: 249 ATIAMLTLDRYFGFHFFTNDMGGSPMLYVNLIWTWGHPEVYILVLPAFGIYSEVVSTFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 309 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 429 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG++L+A+GI  F++Q++V Y +R+  +D+TGDPW+GRTLEW+TSSP 
Sbjct: 489 NPEWDPYIAIAFFGSVLVAIGIACFVMQIVVGYLQRNDNLDLTGDPWDGRTLEWATSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I+  D++W  K+N   + K   ++DI MP N   G++I++F  +MGF L+
Sbjct: 549 PFYNFAHLPTINGIDTFWNDKENGVAYAKPTSYEDIHMPTNRAAGVVIAMFITVMGFGLI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L ++ FI  +I  I ++F  K +YY+ + E+  IE +R
Sbjct: 609 WHIWWLVVVMFIAAIISFIASSFTKKVDYYVPAAEVERIENER 651


>gi|339485796|ref|YP_004700324.1| ubiquinol oxidase subunit 1 [Pseudomonas putida S16]
 gi|431800863|ref|YP_007227766.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida
           HB3267]
 gi|8134387|sp|Q9WWR2.1|CYOB_PSEPU RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase polypeptide I
 gi|4586338|dbj|BAA76357.1| cytochrome o ubiquinol oxidase B [Pseudomonas putida]
 gi|338836639|gb|AEJ11444.1| ubiquinol oxidase subunit 1 [Pseudomonas putida S16]
 gi|430791628|gb|AGA71823.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida
           HB3267]
          Length = 672

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/585 (60%), Positives = 450/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STF+ 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PI+WT+GFMITF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQL VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQLYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D+W   K+    + P  K++ I MP NT+ G+ + +F  + GFA +
Sbjct: 548 PFYNFAHMPEKVGLDAWHEAKEAGVAYKPAAKYEAIHMPSNTSTGLFMGLFLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 608 WHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|409425669|ref|ZP_11260252.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. HYS]
          Length = 672

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/586 (60%), Positives = 451/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +LV +SL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLVNVSLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STF+ 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMGSGA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHKSMIYASGAIAVLGFAVWLHHFFTMGSGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI   +IQL VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVFGAVLILFGIACQLIQLYVSIRDRKDNMDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D+W   K+    +K P  K++ I MP NT+ G+ +     + GFA 
Sbjct: 548 PFYNFASMPENVDLDAWHETKQAGKAYKVPA-KYEAIHMPNNTSTGVFMGALLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S I T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLIGTIAVFVAHAARDDQGYMVPAEEVARIEGERMK 652


>gi|333906471|ref|YP_004480057.1| cytochrome o ubiquinol oxidase subunit I [Marinomonas posidonica
           IVIA-Po-181]
 gi|333476477|gb|AEF53138.1| cytochrome o ubiquinol oxidase, subunit I [Marinomonas posidonica
           IVIA-Po-181]
          Length = 659

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/585 (61%), Positives = 449/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ A++     GYLPP HY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 70  MLLRGFADAIMMRLQLALATSGDPGYLPPHHYDQIFTAHGVIMIIFMAMPFMIGLMNIVV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+ + GAILV ISL +GEFA TGW+ YPPL+G+  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLAASGAILVNISLGLGEFAKTGWVAYPPLAGLEYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+ +N +AT+ KMR PGMKLM+MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTAVNFLATVFKMRTPGMKLMDMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEVVSTF+ 
Sbjct: 250 AVLAMLTLDRYLDFHFFTNDGGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVVSTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+AT  I++L +IVWLHHFFTMGS ANVNAFFG+ TMII++PTG K+FNWL
Sbjct: 310 KRLFGYKSMVWATASISILGFIVWLHHFFTMGSSANVNAFFGVMTMIIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLRMTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+ L    GK +FW WL+GF++AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFHLNVKLGKAAFWCWLVGFFLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IA  G ++I  GI   ++QL VS+R R   +D TGDPW+G TLEWSTSSPP
Sbjct: 490 NPDWNIWLYIALVGAVVIFAGIGCQLLQLFVSFRDRKQNLDTTGDPWDGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P++   D++  MK+    +  K  +  I MPKNT+ GI+I       GFA++
Sbjct: 550 QYYNFAELPVVSDIDAFTDMKEKGTAYQRKASYAPIHMPKNTSAGIIIGGLITAFGFAMI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I+ F  +++  I   +    +YY+  +EI  IE + + 
Sbjct: 610 WHIWWLAILGFAGSIVTFIIRAYTKDVDYYVQPDEIAQIENEHLD 654


>gi|71732473|gb|EAO34526.1| Cytochrome-c oxidase [Xylella fastidiosa subsp. sandyi Ann-1]
          Length = 665

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/586 (63%), Positives = 457/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+ MR Q AI+   + G  PP HY+QIFTAHGVIMIFF+AMPL+TG++N IV
Sbjct: 67  MLLRGFADAIFMRTQLAIAHSGNEGIFPPHHYDQIFTAHGVIMIFFMAMPLMTGLLNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+  GG+ L+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAYPFLNSLSFWLFVGGSALINISLAVGEFAQTGWLAYPPLSELEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+GIN + TI++MRAPGM LM MP+FTWTAL TNILI+AAFP+LT
Sbjct: 187 DYYLWALQISGLGTLLTGINFLVTIMRMRAPGMTLMRMPVFTWTALITNILIIAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYILVLP FGI+SE+V+T+  
Sbjct: 247 VTLALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILVLPAFGIYSELVATYCR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 307 KKLFGYTSMVYATSCIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+ WTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRVHFSAPMWWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNTIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++GI YWFPKAFG+KL    GK SF  W++GF+VAFMPLY LGFMG+TRR++ + 
Sbjct: 427 VVFGYLAGITYWFPKAFGFKLNETLGKASFACWIVGFFVAFMPLYALGFMGMTRRLNSYN 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +AA G ++I +GI   ++Q   S        D+TGDPW+GRTLEWSTSSPP
Sbjct: 487 NPQWEPWLLVAAGGAVIIGIGIFLNLLQFAYSLWTHKQNRDLTGDPWDGRTLEWSTSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W  K+    + K DK++DI MP+NT  G  I  FS+++GFAL 
Sbjct: 547 PFYNFAHVPHVDSLDQFWEDKQRGKAWKKPDKYEDIHMPRNTAAGFWIGAFSIVLGFALT 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + I+  +  +   I  +F+   +Y++ +EE+  IE +R  L
Sbjct: 607 WHIWWMAILGLVGMIGSFIARSFDNDIDYWVPAEEVARIENERFAL 652


>gi|384228445|ref|YP_005620180.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           Ua (Uroleucon ambrosiae)]
 gi|345539378|gb|AEO08245.1| cytochrome O ubiquinol oxidase subunit I [Buchnera aphidicola str.
           Ua (Uroleucon ambrosiae)]
          Length = 663

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/588 (65%), Positives = 456/588 (77%), Gaps = 4/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA++MR QQ IS     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N ++
Sbjct: 68  MLFRGFVDAILMRTQQVISSAGYKGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+ +  A+L+ +SL IGEFA TGWL YPPLSGI  S GVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLNASSAVLLTLSLGIGEFAQTGWLAYPPLSGIKYSSGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+GIN + TI+ MRAPGM    MP+FTWTALCTNILIV +FPVLT
Sbjct: 188 DYWIWSLQISGVGTTLTGINFLVTILNMRAPGMSFFKMPVFTWTALCTNILIVISFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTNDLGGN MMYVNLIWIWGHPEVYILVLP FGIFSE+V TFS 
Sbjct: 248 ITLILLTLDRYLDFHFFTNDLGGNAMMYVNLIWIWGHPEVYILVLPAFGIFSEIVPTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY S+V+AT+ IT+LS+IVWLHHFFTMG+GAN+N+FFGITTMII+IPTG KIFNWL
Sbjct: 308 KSLFGYISLVWATLSITILSFIVWLHHFFTMGAGANINSFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI     ILWT+GF++TF IGGM GV+L+VP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYQGRIYIHSSILWTLGFLVTFSIGGMTGVLLSVPPADFILHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPK FG+ L   WGKC+FWFW+IGF +AF+PLY LG MG+TRR+S   
Sbjct: 428 VVFGCFAGINYWFPKLFGFILNEKWGKCAFWFWIIGFLLAFIPLYFLGLMGMTRRLSQDI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        IAA G + I +GI+  IIQ  VS R R   +D+TGDPWNGRTLEWSTSSP 
Sbjct: 488 NPEFHKLLCIAAIGAIFIGIGIVCQIIQFFVSIRDRKYNLDLTGDPWNGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMK---KNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           P+YNFA IP +   D +W  K   KNN K      +  I MPKNT +G LISIFSL+ GF
Sbjct: 548 PLYNFAIIPQVKCRDDFWETKNSSKNNKKMMSSINYHTIHMPKNTGLGFLISIFSLLFGF 607

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A VWH+  L ++S I  +I +I ++ N    Y IS E+I  IE K  +
Sbjct: 608 AAVWHITWLCVLSCISIVISLIKHSLNEDTEYTISIEDIKKIENKNFK 655


>gi|444426675|ref|ZP_21222084.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Vibrio
           campbellii CAIM 519 = NBRC 15631]
 gi|444240086|gb|ELU51635.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Vibrio
           campbellii CAIM 519 = NBRC 15631]
          Length = 696

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/584 (63%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA MMR QQA +  +  GYLPPEHY+QIF+AHGVIMIFFVAMP V G++N IV
Sbjct: 81  MLFRGFADAFMMRTQQAAATINGTGYLPPEHYDQIFSAHGVIMIFFVAMPFVVGLMNIIV 140

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GAIL+ +SLFIGEFA+TGWL YPPLSG+  SP VGV
Sbjct: 141 PLQIGARDVAFPFLNSLSFWLFVVGAILINMSLFIGEFAATGWLAYPPLSGMEYSPWVGV 200

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+GIGTLL+G+N + TII+MRAPGMKLM MP+FTWT+LC N LIV AFP+LT
Sbjct: 201 DYWLWALQISGIGTLLTGVNFVVTIIRMRAPGMKLMQMPVFTWTSLCANALIVLAFPILT 260

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRYIGTHFFT D+GGN+MMYVNLIW WGHPEVYIL+LP FGIFSE+ +TFS 
Sbjct: 261 VTLTLLTLDRYIGTHFFTTDMGGNVMMYVNLIWAWGHPEVYILILPAFGIFSEITATFSR 320

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+AT VI +LS++VWLHHFFTMG+GA+VNAFFGI TMIISIPTG KIFNWL
Sbjct: 321 KRLFGYTSLVWATAVIMILSFVVWLHHFFTMGAGASVNAFFGIATMIISIPTGVKIFNWL 380

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F   + WTI F+ITF IGGM GV+LAVPAANF+LHNSLF++AHFHNVIIGG
Sbjct: 381 FTMYKGRVEFTASMWWTIAFLITFTIGGMTGVMLAVPAANFVLHNSLFVIAHFHNVIIGG 440

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKA G+KL+   GK S   W +GF+V FMP+Y+LGF G+TRR++  +
Sbjct: 441 ALFGYFAGFTYWFPKATGFKLDEKLGKLSCVLWTVGFFVTFMPIYVLGFSGMTRRLNVAD 500

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +        I+AFG  +IA GI +   Q+ VS R R   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 501 NPEWAPLLWISAFGVFIIASGIATQFYQVYVSIRDRKKNLDLTGDPWDGRTLEWATSSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P I   D   Y K+N   +   ++++ I MPKNT  G++IS F+L +GFA V
Sbjct: 561 AFYNFATLPKIRDRDEHHYAKENGLAYIAPERYKRIHMPKNTWAGVVISAFALTLGFAFV 620

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W + I S +  L   I  +F   ++YY+   E+  IE+  +
Sbjct: 621 WHIWWMVIASSVGILASWIAYSFERNKDYYVEVAEVEAIERAHL 664


>gi|347735796|ref|ZP_08868596.1| cytochrome o ubiquinol oxidase [Azospirillum amazonense Y2]
 gi|346920898|gb|EGY01813.1| cytochrome o ubiquinol oxidase [Azospirillum amazonense Y2]
          Length = 664

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/587 (60%), Positives = 453/587 (77%), Gaps = 5/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGFTDAVMMRLQQA+S G   GYLPPEHYNQIF+AHG IMIFF+AMP V G++NF V
Sbjct: 68  MLLRGFTDAVMMRLQQAVSVGPDAGYLPPEHYNQIFSAHGTIMIFFMAMPFVIGLMNFAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++S W+T+ G +L  +SL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 128 PLQLGIRDVAFPTLNSVSLWLTASGILLTNLSLVVGEFARTGWLAYPPLSELKYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLLSGIN+  TI+KMRAPGM  M MP+F WTAL +N+LI+AAFPVLT
Sbjct: 188 DYYLWALQISGVGTLLSGINLATTILKMRAPGMSYMRMPVFCWTALASNLLIIAAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +   +  LDRY+G HFFT D  GN MMYVNLIW+WGHPEVYIL+LP FG+FSEVVSTFS 
Sbjct: 248 ATFAMLLLDRYLGMHFFTADGDGNPMMYVNLIWVWGHPEVYILILPCFGVFSEVVSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I +LS+IVWLHHFFTMG+GANVN FFG+ TMII++PTG K++NWL
Sbjct: 308 KPLFGYRSMVAATMAICILSFIVWLHHFFTMGAGANVNGFFGVMTMIIAVPTGVKVYNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  PILW++GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYGGRVRFNAPILWSVGFMVTFVIGGMTGVLLAVPPADFILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+++G  YWFPKAFG+ L+  WGK SFW W +GFY+AFMPLY LG +G+TRR+ H++
Sbjct: 428 VVFGVLAGYMYWFPKAFGFTLDEGWGKVSFWCWFVGFYLAFMPLYYLGMLGMTRRLQHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q W  +AA G   I  GIL+ IIQL+VS R R    D TGDPW+GRTLEWST SPP
Sbjct: 488 NPGWQPWLIVAAMGVAFILAGILALIIQLVVSIRTRERRRDRTGDPWHGRTLEWSTPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK-----FPKDKFQDILMPKNTNIGILISIFSLIMG 535
           P +NFA +P + + D++W+MK+   +          +  I MP N+  G + + F+++ G
Sbjct: 548 PAWNFAVLPQVEREDAYWHMKRRAREERVAAAEALAYAPIHMPLNSPTGFVTAFFAVVTG 607

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           FAL+WH+W L I+  +  LI  +   +  +  + I++EE+  +++  
Sbjct: 608 FALIWHIWWLVILGLVGALITTLVFAWRDESEFEIAAEELAQVDRAH 654


>gi|392310767|ref|ZP_10273301.1| cytochrome o ubiquinol oxidase subunit I [Pseudoalteromonas citrea
           NCIMB 1889]
          Length = 677

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/585 (62%), Positives = 457/585 (78%), Gaps = 3/585 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFG--YLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           L RGF DA+MMR QQA++   S G  YLPPEHY+QIFTAHGVIMIFFVAMPLV G++N +
Sbjct: 82  LVRGFADALMMRAQQALATADSVGAGYLPPEHYDQIFTAHGVIMIFFVAMPLVVGLMNIV 141

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           VPLQIGARDVAFPFLN+LSFW+   GA+LV +SLF+GEFA+TGWL YPPLSG+  SP VG
Sbjct: 142 VPLQIGARDVAFPFLNSLSFWLFVVGAVLVNVSLFVGEFAATGWLAYPPLSGLEYSPWVG 201

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDY++W+LQI+GIGTLL+G+N   TI++MRAPGMKLM MP+FTWT+LC N+LI+ +FP+L
Sbjct: 202 VDYWLWALQISGIGTLLTGVNFFVTILRMRAPGMKLMQMPVFTWTSLCANVLIIISFPIL 261

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T  + L TLDRYIGT+FFTNDLGGN MMYVNLIW WGHPEVYIL+LP FGIFSE+ +TFS
Sbjct: 262 TVTITLLTLDRYIGTNFFTNDLGGNQMMYVNLIWAWGHPEVYILILPAFGIFSEITATFS 321

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
            KRLFGY+S+V+AT VI +LS +VWLHHFFTMG+GA+VNAFFGI TMIIS+PTG KIFNW
Sbjct: 322 RKRLFGYTSLVWATAVIMVLSMVVWLHHFFTMGAGASVNAFFGIATMIISVPTGVKIFNW 381

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GR+ F   + WT  F+ TF IGGM GV+LAVPAA+F+LHNSLFL+AHFHNVIIG
Sbjct: 382 LFTMYKGRVEFSASMWWTCSFLFTFTIGGMTGVMLAVPAADFVLHNSLFLIAHFHNVIIG 441

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           G +FG  +G+ YWFPKA G+ L+   GK +   W IGF+ AFMPLYILGF G+TRR++++
Sbjct: 442 GAVFGYFAGMTYWFPKATGFMLDEKLGKLACALWTIGFFAAFMPLYILGFNGMTRRLNYY 501

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           ++        IAA G L++  GI++   Q+ VS R RH   D+TGDPWN RTLEW+TSSP
Sbjct: 502 DNPEWTPLLWIAAGGALIVLAGIMTQFYQIFVSIRDRHKNKDVTGDPWNARTLEWATSSP 561

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PP YNFA +P IH  D  +Y K++   +   DK++ I MPKNT  G++IS FSL+MGFA 
Sbjct: 562 PPFYNFAELPKIHDRDEHYYKKEHGLAYQAPDKYKKIHMPKNTWAGVVISAFSLVMGFAF 621

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           VWH+W +    F+  +   I  +F   ++YY+  E++  IE K +
Sbjct: 622 VWHIWWMAAFGFLGMIGSWIMYSFERNKDYYVPVEQVEEIEAKHL 666


>gi|26987549|ref|NP_742974.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida
           KT2440]
 gi|397697331|ref|YP_006535214.1| Ubiquinol oxidase subunit 1 [Pseudomonas putida DOT-T1E]
 gi|24982222|gb|AAN66438.1|AE016273_7 cytochrome o ubiquinol oxidase, subunit I [Pseudomonas putida
           KT2440]
 gi|18149142|dbj|BAB83594.1| cytochrome o oxidase B [Pseudomonas putida]
 gi|42795024|gb|AAS45857.1| CyoB [Pseudomonas putida DOT-T1E]
 gi|397334061|gb|AFO50420.1| Ubiquinol oxidase subunit 1 [Pseudomonas putida DOT-T1E]
          Length = 672

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/586 (60%), Positives = 450/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTAPMLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFWL GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWLSGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQ++VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQIVVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D W   K+    +K P  K++ I MP NT  G+ + +F  + GFA 
Sbjct: 548 PFYNFAHMPEKVGLDCWHEAKEAGVAYKAPA-KYEAIHMPSNTATGLFMGLFLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|410462422|ref|ZP_11316003.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio magneticus
           str. Maddingley MBC34]
 gi|409984463|gb|EKO40771.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio magneticus
           str. Maddingley MBC34]
          Length = 660

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/585 (58%), Positives = 461/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++ G+S G+LPP+H+NQ+F+AHG IMI F+AMP ++G++N ++
Sbjct: 68  MLLRGFSDAIMMRAQQAMAVGASPGFLPPDHFNQVFSAHGTIMILFMAMPFLSGLMNIVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN +S W++  GA+LVM+SL +GEF+  GW GY PL+ +A SP  GV
Sbjct: 128 PQQIGARDVAFPFLNAVSLWLSVAGALLVMVSLGVGEFSKAGWSGYTPLTELAYSPDTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WS+QI+G+GTLL+GIN + TIIKMRAPGM LM MP+FTWTAL TNILI+ AFP+LT
Sbjct: 188 DYWLWSVQISGVGTLLTGINFLVTIIKMRAPGMTLMRMPLFTWTALLTNILIIFAFPMLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY+G HFFTNDLGGN MMY+NL W WGHPEVYI++LP FGI+SEVV+TFS 
Sbjct: 248 AALLMLSLDRYLGMHFFTNDLGGNTMMYINLFWTWGHPEVYIVILPAFGIYSEVVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+S+VYAT VI  LS+ VW HHFFTMG+ ANVN FFGI+TM+I+IPTG K+FNWL
Sbjct: 308 KRIFGYTSLVYATAVIMFLSFAVWAHHFFTMGTSANVNIFFGISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R   P+LWTIGF+ TFV+GG+ GV++++P A+++LHNSLFL+AHFHN++I G
Sbjct: 368 FTMYKGRVRLTTPMLWTIGFLTTFVLGGLTGVLMSIPPADYVLHNSLFLIAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPKA G+KL+  WGK SFW WLIGFY++F+PLY+LGFMG+ RRM H++
Sbjct: 428 TLFGFLAGFAYWFPKATGFKLDETWGKRSFWCWLIGFYLSFVPLYVLGFMGMPRRMQHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q+   +AA GTL+IA GI   ++QL VS+  R    D TGDPW+GRTLEW+T+SPP
Sbjct: 488 NPAWQLPLIVAAVGTLIIAAGIGCMLMQLFVSFMNRKANADTTGDPWDGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
            VYNFA IP +H  D++W MK+    + + ++++DI+MPKN+  G ++ + + + GFA++
Sbjct: 548 AVYNFAVIPEVHDIDAFWDMKERGLAYARPERYEDIVMPKNSWHGFVLGVVAFVFGFAVI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L   +F+  + +V            I +EE+  IE  R+R
Sbjct: 608 WHIWWLAGATFVGMIAVVTARGCADDLFMVIPAEEVARIEDARVR 652


>gi|386010470|ref|YP_005928747.1| CyoB [Pseudomonas putida BIRD-1]
 gi|313497176|gb|ADR58542.1| CyoB [Pseudomonas putida BIRD-1]
          Length = 672

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/586 (60%), Positives = 449/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTAPMLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFWL GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWLSGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQ++VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQIVVSVRDRKQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D W   K+    +K P  K++ I MP NT  G+ + +F  + GFA 
Sbjct: 548 PFYNFAHMPEKVGLDCWHEAKEAGVAYKAPA-KYEAIHMPSNTATGLFMGLFLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|294143097|ref|YP_003559075.1| cytochrome o ubiquinol oxidase subunit I [Shewanella violacea
           DSS12]
 gi|293329566|dbj|BAJ04297.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella violacea
           DSS12]
          Length = 661

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/584 (61%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGALLINISLGLGEFAKTGWVAYPPLSELSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+G HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF+S
Sbjct: 250 AVLGMLTLDRYLGFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SM++A+  I++L ++VWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMIWASGAISILGFVVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMTTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG  +G  YWFPKA G+KL    GK SFW W IGFY AFMPLY+LGFMG+TRR+SH +
Sbjct: 430 AVFGYFAGFAYWFPKAMGFKLNERLGKASFWCWQIGFYAAFMPLYVLGFMGMTRRISHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W   AA G  +I +GI+   +QL VS+R R   +D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWIYFAAVGAFIIFIGIILQFVQLYVSFRDREQNLDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P +   DS+  MK+    + + D +Q I MPKNT+ GIL+++     GFA +
Sbjct: 550 QFYNFAKDPQVSDIDSFTDMKEKGEAYQRHDSYQPIHMPKNTSSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+  L I   +   ++ ++  ++   +YY+  +EI  IE   +
Sbjct: 610 WHILWLAIAGMLGAFVVFLFRAYSNDHDYYVQPDEIARIENAHL 653


>gi|113972151|ref|YP_735944.1| cytochrome-c oxidase [Shewanella sp. MR-4]
 gi|113886835|gb|ABI40887.1| Cytochrome-c oxidase [Shewanella sp. MR-4]
          Length = 659

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/585 (61%), Positives = 457/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFARTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+G HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFS+V+STF+S
Sbjct: 250 AVLALLTLDRYMGFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSDVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYSSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHID 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  IAA G  +I +GI+   +QL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNMWIYIAAVGACIIMVGIILQFVQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + + K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVSDIDAFTDAKEKGTAYQRLKHYQPIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGMVSAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|224826959|ref|ZP_03700057.1| cytochrome o ubiquinol oxidase, subunit I [Pseudogulbenkiania
           ferrooxidans 2002]
 gi|347538325|ref|YP_004845749.1| cytochrome o ubiquinol oxidase subunit I [Pseudogulbenkiania sp.
           NH8B]
 gi|224600792|gb|EEG06977.1| cytochrome o ubiquinol oxidase, subunit I [Pseudogulbenkiania
           ferrooxidans 2002]
 gi|345641502|dbj|BAK75335.1| cytochrome o ubiquinol oxidase subunit I [Pseudogulbenkiania sp.
           NH8B]
          Length = 681

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/586 (60%), Positives = 451/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR Q A++     G  PPEHY+QIFTAHGVIMI F+AMP +TG++N +V
Sbjct: 69  MLLRGFADAAMMRTQLAMATNGHLGIFPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 129 PLQIGARDVAFPFLNSLSFWLLVAAAALVNLSLGVGEFARTGWVAYPPLSELAYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+ IN + TI+KMR PGMKLM MPIFTWT    N+LIV +FP+LT
Sbjct: 189 DYYIWALQISGIGTTLTAINFLVTILKMRTPGMKLMQMPIFTWTCTWANVLIVTSFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY+  HFFT++ GGN MMY+NL W WGHPEVYILVLP FGIFSEVVSTF+ 
Sbjct: 249 GALAMLTLDRYLDFHFFTSEAGGNPMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG++SM+ A+ VI++L ++VWLHHFFTMGSGANVNAFFGI TM+IS+PTG K+FNWL
Sbjct: 309 KRLFGHTSMIIASGVISVLGFMVWLHHFFTMGSGANVNAFFGIATMVISVPTGVKLFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RF  P+LWT+GFM+TF IGGM GV++AVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 369 FTIYRGRLRFTSPVLWTLGFMVTFSIGGMTGVLMAVPGADFVLHNSLFLIAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+KL+   GK +FWFW  GFY AF+PLYILGFMG+TRR++H +
Sbjct: 429 AVFGYLAGFVFWFPKAFGFKLDERLGKAAFWFWQTGFYFAFVPLYILGFMGMTRRLNHTD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     W   A  G +LIA+GI   ++Q++VS R R  L D+TGDPWN  TLEWSTSSPP
Sbjct: 489 NPLWTPWLYAACIGAVLIALGIGCQLLQIVVSLRNRKQLADVTGDPWNAHTLEWSTSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P +H  D++  MK+    ++ P+ ++  I MPKNT  G+ I  F+L+ GFAL
Sbjct: 549 PFYNFAKLPQVHDIDAFTDMKEKGVAYQVPQ-QYAPIHMPKNTAAGVYIGGFTLVCGFAL 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L I+  I  +  ++   ++   +YY+  +EI  IE++R  
Sbjct: 608 IWHIWWLAIVGLIGIIGSMLARAYDNDIDYYVQPDEIEAIERERFE 653


>gi|295701242|ref|YP_003610243.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia sp.
           CCGE1002]
 gi|295441565|gb|ADG20732.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp.
           CCGE1002]
          Length = 669

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/585 (61%), Positives = 453/585 (77%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQQA++F S  GYLPP+H++QIFTAHGVIMIFF+AM L+ G  N +V
Sbjct: 68  MLVRGFADAVMMRLQQAVAFNSP-GYLPPDHFDQIFTAHGVIMIFFMAMALMVGFFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+T+  A+L+ +SL  GEFA  GWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFLNSLSFWLTAVSAVLINLSLVAGEFAKVGWLAYPPLSELKFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW +Q++G+GTLLSG+N   TIIKMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 187 DYYIWVIQLSGVGTLLSGVNFFVTIIKMRAPGMSLMKMPVFTWTALCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L  LDRYIGTHFFTN+LGGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TF  
Sbjct: 247 VAVALLGLDRYIGTHFFTNELGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVMATFCK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I LLS++VW HHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 307 KPLFGYRTMVYASCAIMLLSFLVWAHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++   P+ WTIGF++TF IGGM GV++A+P A+F+LHNSLFLVAHFHN IIGG
Sbjct: 367 FTMYRGRVQLAAPVFWTIGFVVTFSIGGMTGVMMAIPGADFVLHNSLFLVAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPK FG K +   GK SFW W +GFYVAF+P+Y+LGFMG TRR +H++
Sbjct: 427 VVFGYLAGLQYWFPKVFGVKPDDKVGKASFWCWFVGFYVAFVPVYVLGFMGATRRTNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
               Q +F +AA G  +IA+GIL  ++  ++++  R      D+TGDPW+GRTLEW+TSS
Sbjct: 487 VAEWQPYFIVAALGAAIIAVGILLQVLLWVMAFVNRNEAECKDMTGDPWDGRTLEWATSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP VYNFA IP +   D++ YMK+         K+ DI MP NT+ G    + SL++GFA
Sbjct: 547 PPAVYNFALIPQVEDIDAFAYMKEVGRGVGLASKYVDIHMPSNTSAGFFTGMCSLVLGFA 606

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VWH+  L ++ FI  ++ +I  +F+    YYI +  +  +E++R
Sbjct: 607 AVWHIAWLALLGFIGIVLTIIIKSFDKNDGYYIPAAMVRELEERR 651


>gi|15837990|ref|NP_298678.1| cytochrome O ubiquinol oxidase, subunit I [Xylella fastidiosa 9a5c]
 gi|9106397|gb|AAF84198.1|AE003970_5 cytochrome O ubiquinol oxidase, subunit I [Xylella fastidiosa 9a5c]
          Length = 672

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/586 (62%), Positives = 455/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+ MR Q AI+ G + G  PP HY+QIFTAHGVIMIFF+AMPL+TG++N IV
Sbjct: 74  MLLRGFADAIFMRTQLAIAHGGNEGIFPPHHYDQIFTAHGVIMIFFMAMPLMTGLLNLIV 133

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+  GGA L+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 134 PLQIGARDVAYPFLNSLSFWLFVGGAALINISLAVGEFAQTGWLAYPPLSELEYSPGVGV 193

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + TI++MRAPGM LM MP+FTWTAL TNILI+A+FP+LT
Sbjct: 194 DYYIWALQISGLGTLLTGINFLVTIMRMRAPGMTLMRMPVFTWTALITNILIIASFPILT 253

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL LP FGI+SE+V+T+  
Sbjct: 254 VTLALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILALPAFGIYSELVATYCR 313

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 314 KKLFGYTSMVYATSCIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 373

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+ WTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHN IIG 
Sbjct: 374 FTMYRGRVHFSAPMWWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNTIIGA 433

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++GI YWFPKAFG+KL    GK SF  W++GF+VAFMPLY LGFMG+TRR++ + 
Sbjct: 434 AVFGYLAGITYWFPKAFGFKLNETLGKASFACWIVGFFVAFMPLYALGFMGMTRRLNSYN 493

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +AA G ++I +GI   ++Q   S        D+TGDPW+GRTLEWSTSSPP
Sbjct: 494 NPQWEPWLLVAAGGAVIIGIGIFLNLLQFAYSLWTHKQNRDLTGDPWDGRTLEWSTSSPP 553

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W  K+    + K DK++DI MP+NT  G  I  FS+++GFAL 
Sbjct: 554 PFYNFAHVPHVDSLDQFWEDKQRGKAWKKPDKYEDIHMPRNTAAGFWIGAFSIVLGFALT 613

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + I+  +  +   I  +F+   +Y++ +EE+  IE +R  L
Sbjct: 614 WHIWWMAILGLVGMIGSFIARSFDNDIDYWVPAEEVARIENERFAL 659


>gi|7657996|dbj|BAA94865.1| quinol oxidase subunit I [Shewanella violacea]
          Length = 661

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/584 (61%), Positives = 454/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHG+IMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGIIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS ++ SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGALLINISLGLGEFAKTGWVAYPPLSELSFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+G HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF+S
Sbjct: 250 AVLGMLTLDRYLGFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SM++A+  I++L ++VWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYKSMIWASGAISILGFVVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMTTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG  +G  YWFPKA G+KL    GK SFW W IGFY AFMPLY+LGFMG+TRR+SH +
Sbjct: 430 AVFGYFAGFAYWFPKAMGFKLNERLGKASFWCWQIGFYAAFMPLYVLGFMGMTRRISHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W   AA G  +I +GI+   +QL VS+R R   +D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWIYFAAVGAFIIFIGIILQFVQLYVSFRDREQNLDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA  P +   DS+  MK+    + + D +Q I MPKNT+ GIL+++     GFA +
Sbjct: 550 QFYNFAKDPQVSDIDSFTDMKEKGEAYQRHDSYQPIHMPKNTSSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+  L I   +   ++ ++  ++   +YY+  +EI  IE   +
Sbjct: 610 WHILWLAIAGMLGAFVVFLFRAYSNDHDYYVQPDEIARIENAHL 653


>gi|21672720|ref|NP_660787.1| cytochrome O ubiquinol oxidase B [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008331|sp|Q8K994.1|CYOB_BUCAP RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase polypeptide I
 gi|21623363|gb|AAM67998.1| cytochrome o ubiquinol oxidase B [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 659

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/584 (65%), Positives = 463/584 (79%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA++MR QQ I+   + G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLFRGFVDAILMRTQQVIASSGNTGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+   GAIL+ +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWLNVSGAILLTLSLGIGEFAQTGWLAYPPLSEVKYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+G+GT L+GIN + TI+KMRAPGM    MP+FTW ALCTNILIV +FPVLT
Sbjct: 188 DYWIWSLQISGVGTTLTGINFLITILKMRAPGMCFFKMPVFTWAALCTNILIVISFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDR    HFFTN+ GGN MMYVNLIWIWGHPEVYILVLPVFG+FSEVV+TFS 
Sbjct: 248 TTLLLLTLDRCFDFHFFTNNFGGNPMMYVNLIWIWGHPEVYILVLPVFGVFSEVVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V+AT+ IT+LS+IVWLHHFFTMG+G+NVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYVSLVWATLAITILSFIVWLHHFFTMGAGSNVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+     +LWTIGF+ITF IGGM GV+L++P A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYQGRVHMHSSMLWTIGFLITFSIGGMTGVLLSIPPADFILHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GINYWFPK FG+ L   WGK +FWFW+IGF+ AFMPLY LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGINYWFPKLFGFILNELWGKRAFWFWIIGFFTAFMPLYFLGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           DI       IAA G +LI +GIL  IIQ  VS R RH  +D+TGDPW+GRTLEWSTSSP 
Sbjct: 488 DIEFHFLLSIAAIGAILIGIGILCQIIQFWVSVRDRHINLDVTGDPWDGRTLEWSTSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P+YNFA IP I   D +W +KK   +  K ++  I MPKNT +GI IS FSL+ GF+ VW
Sbjct: 548 PLYNFAIIPHIKNKDDFWELKKQKNQVQKKQYSAIHMPKNTGLGIFISFFSLLFGFSAVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++  L+ +SF++ +I +I+ + +    Y +S +EI  IE + + 
Sbjct: 608 NIIWLSFLSFLVVIISLIFKSIDENTEYTVSVKEIESIENRHLE 651


>gi|114049399|ref|YP_739949.1| cytochrome-c oxidase [Shewanella sp. MR-7]
 gi|113890841|gb|ABI44892.1| Cytochrome-c oxidase [Shewanella sp. MR-7]
          Length = 659

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/585 (61%), Positives = 457/585 (78%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+G HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFS+V+STF+S
Sbjct: 250 AVLALLTLDRYMGFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSDVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYSSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHID 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  IAA G  +I +GI+   +QL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNMWIYIAAVGACIIMVGIILQFVQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + + K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVSDIDAFTDAKEKGTAYQRLKHYQPIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGMVGAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|212555756|gb|ACJ28210.1| Quinol oxidase subunit I [Shewanella piezotolerans WP3]
          Length = 661

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/584 (60%), Positives = 451/584 (77%), Gaps = 1/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLVRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTTSGAVLINISLGLGEFAKTGWVAYPPLSELAFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           ++L + TLDRY+  HFFTN  GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF+S
Sbjct: 250 ALLGMLTLDRYMDFHFFTNAGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR++  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN I+GG
Sbjct: 370 FTIYRGRLKVTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTILGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +YWFPKA G+ L    GK +FW W IGFYVAFMPLY+LGF+G+TRR+SH +
Sbjct: 430 AVFGYLAGFSYWFPKAMGFHLNERLGKAAFWCWQIGFYVAFMPLYVLGFLGMTRRLSHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W   AA G  +I +GI+   +QL VS+R R   +D TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWIYFAAVGAFIIFVGIILQFVQLYVSFRDREQNLDTTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + +   +Q I MPKNT  GILI+I     GFA V
Sbjct: 550 QFYNFAKLPHVSDIDAFTDQKEKGQAYQRFAHYQPIHMPKNTASGILIAICITAAGFAAV 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+  L I   +   +  ++  +    +YY+   E+  IE   +
Sbjct: 610 WHILWLAIAGMLGAFVAFLFRAYGNDHDYYVQPSEVATIENGHL 653


>gi|403053884|ref|ZP_10908368.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter bereziniae
           LMG 1003]
          Length = 663

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 472/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNITV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN++SFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSVSFWLFAGAAGLMMVSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGMKLM+MPIFTWTALCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTALCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY   HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+VSTFS 
Sbjct: 250 ATIAMLTLDRYFDFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVSTFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 310 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+ WT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTSPMYWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK SFWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGITFYWPKMFGWKLNETWGKASFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+GR LEWSTSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQVIVGFLQRHDNMDHTGDPWDGRVLEWSTSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP I+  D++W  K+N   + + +K++DI MP +   G +I++F   MGFAL+
Sbjct: 550 PFYNFAEIPKINGIDTFWNDKENGVAYARPEKYEDIHMPTDRAAGFVIALFITSMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L +++F+  +I  I ++F  K +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVTFLGAVISFIVSSFTKKVDYYVPAAEVERIENERYAL 655


>gi|255319504|ref|ZP_05360718.1| cytOchrome o ubiquinol oxidase, subunit I [Acinetobacter
           radioresistens SK82]
 gi|262378472|ref|ZP_06071629.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter
           radioresistens SH164]
 gi|421463893|ref|ZP_15912586.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter
           radioresistens WC-A-157]
 gi|421856869|ref|ZP_16289227.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter
           radioresistens DSM 6976 = NBRC 102413]
 gi|255303444|gb|EET82647.1| cytOchrome o ubiquinol oxidase, subunit I [Acinetobacter
           radioresistens SK82]
 gi|262299757|gb|EEY87669.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter
           radioresistens SH164]
 gi|400206267|gb|EJO37244.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter
           radioresistens WC-A-157]
 gi|403187616|dbj|GAB75428.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter
           radioresistens DSM 6976 = NBRC 102413]
          Length = 660

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/586 (63%), Positives = 469/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 67  MLLRGFADAIMMRLQQFLARGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNISV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M SL IGEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 127 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMASLAIGEFAATGWMAYPPLSGIEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TIIKMRAPGMKLM+MPIFTWTALCT++LI+AAFPVLT
Sbjct: 187 DYYIWALQISGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTALCTSVLIIAAFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + +LDRY G HFFTND+GG+ M+YVNLIW WGHPEVYILVLP FGI+SEVV+TF  
Sbjct: 247 ATIAMLSLDRYFGFHFFTNDMGGSPMLYVNLIWTWGHPEVYILVLPAFGIYSEVVATFCR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYATV IT+LS++VW+HHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 307 KALFGYKSMVYATVAITVLSFVVWVHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGGM GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 367 FTMYKGRITYTTPMLWTLGFLVTFGIGGMTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 427 VVFAMFAGIIYYWPKMFGWKLNETWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG ++IA+GI  F++Q+IV + +R+  +D+TGDPW+ RTLEWSTSSP 
Sbjct: 487 NPDWDPYVTIAMFGAVMIAIGIACFLMQIIVGFLQRNDNLDLTGDPWDARTLEWSTSSPA 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P  +  D +W  K+N   + +   ++D+ MP N   G +I++F  +MGFAL+
Sbjct: 547 PFYNFAHLPEGNGIDRFWTDKENGVAYARPTSYEDVHMPTNRAAGFVIAMFITVMGFALI 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  I+F   +I  I ++F  K +YY+ + E+  IE +R  L
Sbjct: 607 WHIWWLVFITFAAAIISFIVSSFTKKVDYYVPAAEVKRIEDERYAL 652


>gi|50085511|ref|YP_047021.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. ADP1]
 gi|49531487|emb|CAG69199.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. ADP1]
          Length = 662

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 473/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 69  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 129 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMASLVLGEFAATGWMAYPPLSGIQYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 189 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 249 ATLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 309 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI FE P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRISFETPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 429 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+ RTLEWSTSSP 
Sbjct: 489 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDHTGDPWDSRTLEWSTSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P  +  D++W  K+N   + ++ K++DI MP +   G +I++F   MGFAL+
Sbjct: 549 PFYNFAHVPNGNGVDAFWVDKENGIAYARNTKYEDIHMPTDRAAGFVIAMFITTMGFALI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  + FI +++ +I ++F  + +YY+ + E+  IE +R  L
Sbjct: 609 WHIWWLVAVCFIASIVSLIRSSFTKEVDYYVPAAEVERIENERYAL 654


>gi|325275993|ref|ZP_08141818.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. TJI-51]
 gi|324098874|gb|EGB96895.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. TJI-51]
          Length = 672

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/586 (60%), Positives = 449/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTPPMLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFWL GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWLSGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQL VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQLYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D W   K+    +K P  K++ I MP NT  G+ + +F  + GFA 
Sbjct: 548 PFYNFAHMPEKVGLDCWHEAKEEGVAYKVPA-KYEAIHMPSNTATGLFMGLFLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|406040124|ref|ZP_11047479.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter ursingii
           DSM 16037 = CIP 107286]
          Length = 662

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/586 (62%), Positives = 471/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 69  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 129 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMASLVLGEFAATGWMAYPPLSGIQYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 189 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 249 ATLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 309 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 369 FTMYKGRISFDTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 429 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+ RTLEWSTSSP 
Sbjct: 489 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDSRTLEWSTSSPA 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P  +  D +W  K+N   + +  K++DI MP +   G +I++F  +MGFAL+
Sbjct: 549 PFYNFAQVPEANGVDRFWTDKENGVAYARPAKYEDIHMPTDRAAGFIIAMFITLMGFALI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +SFI  +I  I ++F  + +YY+ + E+  IE +R  L
Sbjct: 609 WHIWWLVAVSFIAAIISFIRSSFTKEVDYYVPAAEVERIENERYAL 654


>gi|420249820|ref|ZP_14753056.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. BT03]
 gi|398063380|gb|EJL55118.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia sp. BT03]
          Length = 670

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/584 (62%), Positives = 454/584 (77%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A++ G + GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLLRGFADAVMMRLQLALASGGATGYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA  GWL YPPLS +  SPG GV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWMTAISAILMNISLVIGEFAQVGWLAYPPLSELQFSPGSGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+++G+GTL++ IN   TIIKMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 188 DYYIWALELSGVGTLITAINFFVTIIKMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY   HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV+STF+ 
Sbjct: 248 VALALLGLDRYADMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVISTFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +L+++VW HHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KPLFGYKTMVYASCAIMVLAFLVWAHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFMITF IGGM GV+LA+P A+F+LHNSLFLVAHFHN IIGG
Sbjct: 368 FTIYRGRLEFTAPVLWTIGFMITFTIGGMTGVMLAIPGADFVLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPK FG+KL    GK +FW W +GF+VAF PLY+LGFMG TRR++H++
Sbjct: 428 VVFGYLAGFSYWFPKVFGFKLNDKLGKSAFWCWFVGFFVAFTPLYVLGFMGATRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + + Q +  +AA G  LIA+G++  ++Q++VS   R +    D+TGDPW GRTLEWS SS
Sbjct: 488 NPAWQPYMIVAACGVALIAVGVVFQVVQVVVSIINRNKPEYRDVTGDPWGGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP++ + D++ +MK+       +  +QDI MP NT+ G  I +FSL  GFA
Sbjct: 548 PPPVYNFATIPVVEELDAFAHMKETGRGLGIQAAYQDIHMPSNTSAGFFIGVFSLAFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWH+W L I+S +    IVI  +F     Y+I S+ +  IE K
Sbjct: 608 AVWHIWWLAIVSLVAIAAIVIGRSFGRDDGYFIPSDVVRAIENK 651


>gi|390575567|ref|ZP_10255660.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
 gi|389932477|gb|EIM94512.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
          Length = 670

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/584 (62%), Positives = 453/584 (77%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A++ G + GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLLRGFADAVMMRLQLALASGGATGYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA  GWL YPPLS +  SPG GV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWMTAISAILMNISLVIGEFAQVGWLAYPPLSELQFSPGSGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+++G+GTL++ IN   TIIKMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 188 DYYIWALELSGVGTLITAINFFVTIIKMRAPGMTLMKMPVFTWTALCSNVLIMATFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY   HFFTN+ GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV+STF+ 
Sbjct: 248 VALALLGLDRYADMHFFTNEAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVISTFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +L+++VW HHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KPLFGYKTMVYASCAIMVLAFLVWAHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+ F  P+LWTIGFMITF IGGM GV+LA+P A+F+LHNSLFLVAHFHN IIGG
Sbjct: 368 FTIYRGRLEFTAPVLWTIGFMITFTIGGMTGVMLAIPGADFVLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G +YWFPK FG+KL    GK +FW W +GF+VAF PLY+LGFMG TRR++H++
Sbjct: 428 VVFGYLAGFSYWFPKVFGFKLNDKLGKSAFWCWFVGFFVAFTPLYVLGFMGATRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + + Q +  +AA G  LIA+G++  + Q++VS   R +    D+TGDPW GRTLEWS SS
Sbjct: 488 NPAWQPYMIVAACGVALIAVGVVFQVAQVVVSIINRNKPEYRDVTGDPWGGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP++ + D++ +MK+       +  +QDI MP NT+ G  I +FSL  GFA
Sbjct: 548 PPPVYNFATIPVVEELDAFAHMKETGRGLGIQAAYQDIHMPSNTSAGFFIGVFSLAFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWH+W L I+S +    IVI  +F     Y+I S+ +  IE K
Sbjct: 608 AVWHIWWLAIVSLVAIAAIVIGRSFGRDDGYFIPSDVVRAIENK 651


>gi|285017724|ref|YP_003375435.1| cytochrome o ubiquinol oxidase subunitItransmembrane protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472942|emb|CBA15447.1| probable cytochrome o ubiquinol oxidase subunitItransmembrane
           protein [Xanthomonas albilineans GPE PC73]
          Length = 673

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/586 (62%), Positives = 451/586 (76%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMR QQA++   + G  PP HY+QIFTAHGVIMIFF+AMP +TG++N +V
Sbjct: 75  MLLRGFADAAMMRTQQAMAHDGNPGIFPPHHYDQIFTAHGVIMIFFMAMPFMTGLLNLVV 134

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   GA LV ISL +GEFA TGWL YPPLS +  S GVGV
Sbjct: 135 PLQIGARDVAFPFLNSLSFWLFVSGAALVNISLGVGEFAQTGWLAYPPLSELQYSSGVGV 194

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+G+N   TI++MRAPGM LM MPIFTWTAL TNILI+AAFP+LT
Sbjct: 195 DYYIWALQISGLGTLLTGVNFFVTIMRMRAPGMTLMRMPIFTWTALITNILIIAAFPILT 254

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL+LP FGIFSE+++TFS 
Sbjct: 255 VALALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILILPAFGIFSELIATFSR 314

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 315 KRLFGYASMVYATSCIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 374

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGR+    P+LWTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHNVIIGG
Sbjct: 375 FTMFRGRVHMTAPVLWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNVIIGG 434

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YWFPKAFG+KL    GK SFW W++GF++AFMPLY+LGFMG+TRRM+ + 
Sbjct: 435 VVFGYLAGLTYWFPKAFGFKLNETLGKASFWCWIVGFFIAFMPLYVLGFMGMTRRMNSYN 494

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AA G  +I  GI   ++Q++ S  KR   +D+TGDPW+ RTLEW+TSSPP
Sbjct: 495 HPEWAPWLMVAAVGAAIIGAGIFLNLLQIVYSIWKRKDNLDLTGDPWHARTLEWATSSPP 554

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P I   D +W  K     + +  K++ I MP+NT  G  I  F + +GF L 
Sbjct: 555 PFYNFAVLPHIDDRDQFWEDKAKGKGWTRPAKYEPIHMPRNTAAGFWIGAFGVALGFGLT 614

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + ++  +  +   I  TF+   +Y++ +EE+  IE  R  L
Sbjct: 615 WHIWWMALVGLVGMVGSFIARTFDDDIDYWVPAEEVERIENARFAL 660


>gi|445414434|ref|ZP_21433958.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter sp.
           WC-743]
 gi|444764381|gb|ELW88695.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter sp.
           WC-743]
          Length = 638

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 472/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 45  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNITV 104

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN++SFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 105 PLQIGARDVAFPLLNSVSFWLFAGAAGLMMVSLVLGEFAATGWMAYPPLSGIQYSPGVGV 164

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGMKLM+MPIFTWTALCT +LI+A+FPVLT
Sbjct: 165 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTALCTAVLIIASFPVLT 224

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY   HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+VSTFS 
Sbjct: 225 ATIAMLTLDRYFDFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVSTFSR 284

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 285 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 344

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+ WT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 345 FTMYKGRITFTSPMYWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 404

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK SFWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 405 VVFGMFAGITFYWPKMFGWKLNETWGKASFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 464

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+GR LEWSTSSP 
Sbjct: 465 NPEWDPYLAIALFGAVLVAIGIACFLMQVIVGFLQRHDNMDHTGDPWDGRVLEWSTSSPA 524

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP I+  D++W  K+N   + + +K++DI MP +   G +I++F   MGFAL+
Sbjct: 525 PFYNFAEIPKINGIDTFWNDKENGVAYARPEKYEDIHMPTDRAAGFVIALFITSMGFALI 584

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L +++F+  +I  I ++F  K +YY+ + E+  IE +R  L
Sbjct: 585 WHIWWLVVVTFLGAVISFIVSSFTKKVDYYVPAAEVERIENERYAL 630


>gi|148546080|ref|YP_001266182.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida F1]
 gi|395447239|ref|YP_006387492.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida ND6]
 gi|421524542|ref|ZP_15971164.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida LS46]
 gi|148510138|gb|ABQ76998.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Pseudomonas
           putida F1]
 gi|388561236|gb|AFK70377.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida ND6]
 gi|402751721|gb|EJX12233.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida LS46]
          Length = 672

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/586 (60%), Positives = 449/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTAPMLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFWL GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWLSGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQ+ VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQIFVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D W   K+    +K P  K++ I MP NT  G+ + +F  + GFA 
Sbjct: 548 PFYNFAHMPEKVGLDCWHEAKEAGVAYKAPA-KYEAIHMPSNTATGLFMGLFLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|153002717|ref|YP_001368398.1| cytochrome o ubiquinol oxidase subunit I [Shewanella baltica OS185]
 gi|160877453|ref|YP_001556769.1| cytochrome o ubiquinol oxidase subunit I [Shewanella baltica OS195]
 gi|217975290|ref|YP_002360041.1| cytochrome o ubiquinol oxidase subunit I [Shewanella baltica OS223]
 gi|373947570|ref|ZP_09607531.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS183]
 gi|378710666|ref|YP_005275560.1| cytochrome o ubiquinol oxidase subunit I [Shewanella baltica OS678]
 gi|386326582|ref|YP_006022699.1| cytochrome o ubiquinol oxidase subunit I [Shewanella baltica BA175]
 gi|386339096|ref|YP_006035462.1| cytochrome o ubiquinol oxidase subunit I [Shewanella baltica OS117]
 gi|151367335|gb|ABS10335.1| Cytochrome o ubiquinol oxidase subunit I [Shewanella baltica OS185]
 gi|160862975|gb|ABX51509.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS195]
 gi|217500425|gb|ACK48618.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS223]
 gi|315269655|gb|ADT96508.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS678]
 gi|333820727|gb|AEG13393.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           BA175]
 gi|334861497|gb|AEH11968.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS117]
 gi|373884170|gb|EHQ13062.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS183]
          Length = 659

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/585 (61%), Positives = 456/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFS+V+STF+S
Sbjct: 250 AVLALLTLDRYMDFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSDVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHID 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  +AA G  +I +GI+   IQL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNVWIYLAAVGACIIMVGIILQFIQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + + K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVADIDAFTDAKEKGVAYQRQKHYQAIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   ++ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGLVGAFVVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|336313527|ref|ZP_08568467.1| cytochrome O ubiquinol oxidase subunit I [Shewanella sp. HN-41]
 gi|335862865|gb|EGM68046.1| cytochrome O ubiquinol oxidase subunit I [Shewanella sp. HN-41]
          Length = 659

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/585 (61%), Positives = 456/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFARTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFS+V+STF+S
Sbjct: 250 AVLALLTLDRYMDFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSDVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHID 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  IAA G  +I +GI+   +QL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNMWIYIAAVGACIIMVGIILQFVQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + + K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVSDIDAFTDAKEKGTAYQRQKHYQPIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGMVGAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|418022784|ref|ZP_12661770.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS625]
 gi|353537786|gb|EHC07342.1| cytochrome o ubiquinol oxidase, subunit I [Shewanella baltica
           OS625]
          Length = 659

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/585 (61%), Positives = 456/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFAKTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFS+V+STF+S
Sbjct: 250 AVLALLTLDRYMDFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSDVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYTSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLALPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHID 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  +AA G  +I +GI+   IQL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNVWIYLAAVGACIIMVGIILQFIQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + + K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVADIDAFTDAKEKGVAYQRQKHYQAIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   ++ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGLVGAFVVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|326793468|ref|YP_004311288.1| cytochrome o ubiquinol oxidase subunit I [Marinomonas mediterranea
           MMB-1]
 gi|326544232|gb|ADZ89452.1| cytochrome o ubiquinol oxidase, subunit I [Marinomonas mediterranea
           MMB-1]
          Length = 658

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/585 (60%), Positives = 450/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPP HY+QIFTAHGVIMI F+AMP + G++N +V
Sbjct: 69  MLIRGFADAIMMRTQLAVATNGSEGYLPPHHYDQIFTAHGVIMIIFMAMPFMIGLMNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+   GA+LV ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 129 PLQIGARDVAFPFLNNLSFWLAVSGAVLVNISLGLGEFAMTGWVAYPPLSGLEFSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N + T+IKMRAPGMKLM MPIFTWT    N+LIVA+FP+LT
Sbjct: 189 DYYIWALQISGIGTTLTGVNFLVTVIKMRAPGMKLMQMPIFTWTCTWANVLIVASFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+  HFFTNDLGGN MMY+NL W WGHPEVYILVLP FGIFSE+VST++ 
Sbjct: 249 AALAMLTLDRYLDFHFFTNDLGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEIVSTYTG 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMVYA+  I++L +IVWLHHFFTMGS A+VNAFFGI TMII++PTG K+FNWL
Sbjct: 309 KRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSASVNAFFGIMTMIIAVPTGVKLFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+R E P+LWTIGF+ITF +GGM GV+LA+P A+++LHNSLFL+AHFHN IIGG
Sbjct: 369 FTMYKGRVRMEPPMLWTIGFIITFSVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+ L P  GK SFW W IGF+VAFMPLY+LGF+G+TRR++H +
Sbjct: 429 AVFGYLAGFAFWFPKAMGFHLNPKIGKFSFWCWFIGFFVAFMPLYVLGFLGMTRRLNHTD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IAA G  +IA+GI +  +QLI+ + ++   +D TGDPWNG TLEWS SSPP
Sbjct: 489 NPDWNIWLYIAAGGAFIIALGIAAQFVQLILGFIQKDKNLDKTGDPWNGHTLEWSLSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D++  MK+    + +++ ++ I MP NTN G ++   +   GFA++
Sbjct: 549 QFYNFAKIPHVDDIDTFTDMKEKGTAYKREESYEPIHMPSNTNAGPIMGAIATAFGFAMI 608

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L   SFI  ++  I   +    +YY+  +E+  IE   + 
Sbjct: 609 WHIWWLAGASFIGLIVAFIMRAYAKDTDYYVQPDEVARIENAHLD 653


>gi|429334752|ref|ZP_19215404.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas putida
           CSV86]
 gi|428760548|gb|EKX82810.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas putida
           CSV86]
          Length = 672

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/586 (60%), Positives = 449/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G + GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLIRGFADAIMMRTQLAAATGGAEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G  LV ISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVALVNISLGVGEFAKTGWVAYPPLSGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STF+ 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMGSGA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAVLGFAVWLHHFFTMGSGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYVAGFAFWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + + +  +A  G +LI  GI   +IQL VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPAWEPYLYVAVVGAVLILFGIACQLIQLYVSIRDRKDNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
             YNFA +P     D+W   K+    +K P  K++ I MP NT+ G+ + +F  I GFA 
Sbjct: 548 AFYNFATMPEKVGLDAWHEAKEAGVAYKVPA-KYEAIHMPNNTSTGVFMGLFLTIFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L  +S   T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGVSLFATVAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|456354371|dbj|BAM88816.1| cytochrome o ubiquinol oxidase subunit I [Agromonas oligotrophica
           S58]
          Length = 666

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/584 (59%), Positives = 456/584 (78%), Gaps = 5/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMR QQA++F S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLLRGGTDAIMMRTQQAVAFHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL +GEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNVSLVVGEFARTGWLPFPPLSELTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+I+G+GTL+SGIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYIWALEISGVGTLVSGINLVTTVLKLRTRGMSYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SEVV+TFSS
Sbjct: 247 ATLTMLMLDRYFGFHFFTNEAGGNMMMFMNLIWAWGHPEVYILVLPAFGIYSEVVATFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G NVNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICVISFMVWLHHFFTMGAGPNVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW++GFMITF+IGG+ GV++AVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWSVGFMITFMIGGLTGVLVAVPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+ YWFPKAFG++L   WGK +FWF LIGFYV FMPLY++G +G+TRRM H++
Sbjct: 427 VLFGVFAGVTYWFPKAFGFRLYESWGKAAFWFTLIGFYVTFMPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A FGT L+A+G++  I+QL+ S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWLAAATFGTALLAIGVILQILQLVFSIRDRELLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN----NFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   D++W +K+N         +  +QDI +P+N+  G + + F+ IMGF
Sbjct: 547 PVFNFAVLPNVTGQDAYWEIKENAKNQQLHRQEKDYQDIELPRNSPTGFVCAFFATIMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           AL+WH+W +  +  +  L   +   +     Y IS+ E+  I+ 
Sbjct: 607 ALIWHIWWMVALGAMGALATFVVFAWRDHDEYVISAAEVARIDH 650


>gi|170723536|ref|YP_001751224.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas putida W619]
 gi|169761539|gb|ACA74855.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas putida W619]
          Length = 672

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/585 (60%), Positives = 447/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STFS 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P++WT+GFMITF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRVRFTAPMMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQ+ VS R R+  +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQIYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D W   K+    +    K++ I MP NT  G+ + +F  + GFA +
Sbjct: 548 PFYNFAHMPEKVGLDCWHEAKEAGVAYKAPSKYEPIHMPSNTATGLFMGLFLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 608 WHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|28198532|ref|NP_778846.1| cytochrome O ubiquinol oxidase subunit I [Xylella fastidiosa
           Temecula1]
 gi|71274825|ref|ZP_00651113.1| Cytochrome-c oxidase [Xylella fastidiosa Dixon]
 gi|170729930|ref|YP_001775363.1| cytochrome-c oxidase [Xylella fastidiosa M12]
 gi|182681211|ref|YP_001829371.1| cytochrome o ubiquinol oxidase subunit I [Xylella fastidiosa M23]
 gi|386084710|ref|YP_006000992.1| cytochrome O ubiquinol oxidase subunit I [Xylella fastidiosa subsp.
           fastidiosa GB514]
 gi|417558360|ref|ZP_12209342.1| Heme/copper-type cytochrome/quinol oxidase, subunit 1 [Xylella
           fastidiosa EB92.1]
 gi|28056616|gb|AAO28495.1| cytochrome O ubiquinol oxidase subunit I [Xylella fastidiosa
           Temecula1]
 gi|71164557|gb|EAO14271.1| Cytochrome-c oxidase [Xylella fastidiosa Dixon]
 gi|167964723|gb|ACA11733.1| Cytochrome-c oxidase [Xylella fastidiosa M12]
 gi|182631321|gb|ACB92097.1| cytochrome o ubiquinol oxidase, subunit I [Xylella fastidiosa M23]
 gi|307579657|gb|ADN63626.1| cytochrome O ubiquinol oxidase subunit I [Xylella fastidiosa subsp.
           fastidiosa GB514]
 gi|338179164|gb|EGO82128.1| Heme/copper-type cytochrome/quinol oxidase, subunit 1 [Xylella
           fastidiosa EB92.1]
          Length = 665

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 454/586 (77%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+ MR Q AI+   + G  PP HY+QIFTAHGVIMIFF+AMPL+TG++N IV
Sbjct: 67  MLLRGFADAIFMRTQLAIAHSGNEGIFPPHHYDQIFTAHGVIMIFFMAMPLMTGLLNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+  GGA L+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAYPFLNSLSFWLFVGGAALINISLAVGEFAQTGWLAYPPLSELEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+GIN + TI++MRAPGM LM MP+FTWTAL TNILI+AAFP+LT
Sbjct: 187 DYYLWALQISGLGTLLTGINFLVTIMRMRAPGMTLMRMPVFTWTALITNILIIAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL LP FGI+SE+V+T+  
Sbjct: 247 VTLALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILALPAFGIYSELVATYCR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 307 KKLFGYTSMVYATSCIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+ WTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHN IIG 
Sbjct: 367 FTMYRGRVHFSAPMWWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNTIIGA 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G+ YWFPKAFG+KL    GK SF  W++GF+VAFMPLY LGFMG+TRR++ + 
Sbjct: 427 AVFGYLAGMTYWFPKAFGFKLNETLGKASFACWIVGFFVAFMPLYALGFMGMTRRLNSYN 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +AA G ++I +GI   ++Q   S        D+TGDPW+GRTLEWSTSSPP
Sbjct: 487 NPQWEPWLLVAAGGAVIIGIGIFLNLVQFAYSLWTHKQNRDLTGDPWDGRTLEWSTSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D +W  K+    + K DK++DI MP+NT  G  I  FS+++GFAL 
Sbjct: 547 PFYNFAHVPHVDSLDQFWEDKQRGKAWKKPDKYEDIHMPRNTAAGFWIGAFSIVLGFALT 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W + I+  +  +   I  +F+   +Y++ +EE+  IE +R  L
Sbjct: 607 WHIWWMAILGLVGMIGSFIARSFDNDIDYWVPAEEVARIENERFAL 652


>gi|117922463|ref|YP_871655.1| cytochrome c oxidase subunit I [Shewanella sp. ANA-3]
 gi|117614795|gb|ABK50249.1| cytochrome c oxidase, subunit I [Shewanella sp. ANA-3]
          Length = 659

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/585 (61%), Positives = 456/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFSDAIMMRTQQALATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGLGEFARTGWVAYPPLSELAYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N IAT++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTGVNFIATVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYIL+LP FGIFS+V+STF+S
Sbjct: 250 AVLALLTLDRYMDFHFFTNDGGGNAMMYINLFWAWGHPEVYILILPAFGIFSDVISTFTS 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYSSMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGYSSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTIYRGRLRLTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKA G+ L    GK SFW W IGFYVAFMPLY+LGFMG+TRR++H +
Sbjct: 430 AVFGYLAGFAYWFPKATGFHLNERLGKASFWCWQIGFYVAFMPLYVLGFMGMTRRINHID 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +  +W  IAA G  +I +GI+   +QL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 490 NPAWNMWIYIAAVGACIIMVGIILQFVQLYVSIRDRDQNRDTTGDPWNGHTLEWSTASPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++   K+    + + K +Q I MPKNT  GIL+++     GFA +
Sbjct: 550 QFYNFAKLPQVSDIDAFTDAKEKGTAYQRLKHYQPIHMPKNTPSGILMALGITAAGFAAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I+  +   I+ ++  +N   +YY+  +E+  IE   + 
Sbjct: 610 WHILWLAIVGMVGAFIVFLFRAYNNDVDYYVQPDEVARIENAHLN 654


>gi|389706250|ref|ZP_10186340.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. HA]
 gi|388610727|gb|EIM39842.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. HA]
          Length = 602

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/583 (63%), Positives = 468/583 (80%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ ++ G   GYL PEHY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 9   MLVRGFADAIMMRLQQFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNVAV 68

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 69  PLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLALGEFAATGWMAYPPLSGIEYSPGVGV 128

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGMK+M+MPIFTWT+L T +LIVA FPVLT
Sbjct: 129 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKMMDMPIFTWTSLVTVVLIVATFPVLT 188

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + +LDRY G HFFTND+GG+ M+YVNLIW WGHPEVYILVLP FGI+SEV S FS 
Sbjct: 189 ATLAMLSLDRYFGFHFFTNDMGGSPMLYVNLIWTWGHPEVYILVLPAFGIYSEVTSVFSR 248

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYATV I +LS +VW+HHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 249 KALFGYKSMVYATVAIGVLSLVVWVHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 308

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI +  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 309 FTMYKGRITYTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 368

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ F+
Sbjct: 369 VVFAMFAGIIYYWPKMFGWKLNETWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTFD 428

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +LIA+GI  FI+Q++V + +R   +D TGD W+GRTLEW+TSSP 
Sbjct: 429 NPEWDPYVNIAMFGAILIALGIACFIMQIVVGFLQREQNMDYTGDIWDGRTLEWATSSPS 488

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA++P I+  D++W  K+N   + K  K++DI MP N   G +I++F  +MGFAL+
Sbjct: 489 PFYNFAYLPKINGIDTFWTDKENGVAYAKPTKYEDIHMPTNRAAGFVIAMFITVMGFALI 548

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L +++F+ ++I  I ++F  K +YY+ + E+  IE +R
Sbjct: 549 WHIWWLVVVTFVASIISFIVSSFTKKVDYYVPAAEVERIESER 591


>gi|358012548|ref|ZP_09144358.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. P8-3-8]
          Length = 663

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNITV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN++SFW+ +G A L+M SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSVSFWLFAGAAGLMMASLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+N   TIIKMRAPGM LM+MPIFTWTALCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMSLMDMPIFTWTALCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+VSTFS 
Sbjct: 250 ATIAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVSTFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TMII+IPTG KIF+WL
Sbjct: 310 KTLFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+ WT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTSPMYWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK SFWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGITFYWPKMFGWKLNETWGKASFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  FI+Q++V Y +R+  +D TGDPW+GR LEWSTSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFIMQIVVGYLQRNDNMDNTGDPWDGRVLEWSTSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP I+  D++W  K+N   + +  K++DI MP +   G +I++F   MGFAL+
Sbjct: 550 PFYNFAEIPKINGIDTFWNDKENGVAYARPAKYEDIHMPTDRAAGFVIAMFITTMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L +++F+  +I  I ++F  K +YY+ + E+  IE +R  L
Sbjct: 610 WHVWWLVVVTFLGAVISFIVSSFTKKVDYYVPAAEVERIENERYAL 655


>gi|54296266|ref|YP_122635.1| cytochrome o ubiquinol oxidase subunit I [Legionella pneumophila
           str. Paris]
 gi|53750051|emb|CAH11443.1| cytochrome o ubiquinol oxidase subunit I [Legionella pneumophila
           str. Paris]
          Length = 664

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/589 (61%), Positives = 451/589 (76%), Gaps = 5/589 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQA++ G++ G+LPP+HY+QIFTAHGVIMIFFVAMPLV  ++N IV
Sbjct: 73  MLLRGFSDALLMRSQQAVAAGNAIGFLPPDHYDQIFTAHGVIMIFFVAMPLVFALLNMIV 132

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+P+LN+LSFW+T  GA+L  ISL +G+FASTGWL YPPLS +  SP VGV
Sbjct: 133 PLQIGARDVAYPYLNSLSFWLTFVGAMLCNISLVVGQFASTGWLAYPPLSELYYSPDVGV 192

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQI+G+GTLL+GIN IATI+KMR  GM LM MP+F W+ALC  IL+  AFPVLT
Sbjct: 193 DYYIWSLQISGVGTLLAGINFIATILKMRCNGMTLMKMPVFVWSALCAMILVALAFPVLT 252

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDR +  HFF++  GGN MMY+NLIW+WGHPEVYIL+LPVFGIFSEVV+TFS 
Sbjct: 253 VTLALLSLDRMLDMHFFSDFAGGNSMMYINLIWVWGHPEVYILILPVFGIFSEVVATFSQ 312

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY++MV+A  +ITLLS++VWLHHFFTMG+GA+VN+FFGI TMII+IPTG K+FNWL
Sbjct: 313 KKLFGYTTMVWAIAMITLLSFLVWLHHFFTMGAGADVNSFFGIATMIIAIPTGVKVFNWL 372

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI    P+LW   F  TF IGGM GV++AVP  +F  HNSLFLVAHFHNVIIGG
Sbjct: 373 FTMYKGRIIMATPMLWVTAFFTTFAIGGMTGVMMAVPPVDFQTHNSLFLVAHFHNVIIGG 432

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +GI YWFPKAFG++L+  WGK +F+FW+ GFY AFMPLY+LG  G  RR +H+ 
Sbjct: 433 VLFGAFAGITYWFPKAFGFRLDETWGKRAFYFWVTGFYCAFMPLYVLGLDGFVRRTNHYA 492

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q +   AA G LLI +GI+  +IQLIVS + RH L D TGDPWNGRTLEWS +SP 
Sbjct: 493 NTMYQPYLVFAAMGALLILVGIVFQVIQLIVSIKNRHALHDRTGDPWNGRTLEWSVASPA 552

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK----FPKD-KFQDILMPKNTNIGILISIFSLIMG 535
           P+YNFA +P +   D +W  K+++       PKD  +  I MPKNT+ G +I+IFS I G
Sbjct: 553 PIYNFAKLPTVQALDQFWVDKEHHRAEGHIHPKDIHYDPIHMPKNTSTGFIIAIFSGIAG 612

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           FAL+WHM +  II  +  +   I  TF+   +YYI +E +   E    R
Sbjct: 613 FALIWHMLIPGIIGLLGVVSTAIARTFSNDVDYYIDAETVKKTELAHFR 661


>gi|452876717|ref|ZP_21954057.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           VRFPA01]
 gi|452186494|gb|EME13512.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas aeruginosa
           VRFPA01]
          Length = 620

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/544 (64%), Positives = 435/544 (79%), Gaps = 1/544 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++ G++ GYLPPEHY+QIFTAHGVIMI F+AMP +TG++N  V
Sbjct: 68  MLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQIFTAHGVIMIIFMAMPFMTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+    A+LV +SL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSLGLGEFARTGWVAYPPLSELAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+G+GTLL+GIN + T+ KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQISGMGTLLTGINFLVTVFKMRAPGMKLMQMPIFTWTCTFANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  HFFTN+LGGN MMY+NL W WGHPEVYIL+LP FGIFSEV +TF+ 
Sbjct: 248 AALGLLSLDRYLDMHFFTNELGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVTATFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A+  IT L + VWLHHFFTMGSG +VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRMFGYKSMVWASAAITFLGFTVWLHHFFTMGSGGDVNGFFGVATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PILWT+GFM+TF IGGM GV+LA+P A+FLLHNSLFL+AHFHN IIGG
Sbjct: 368 FTIYKGRLRFSTPILWTLGFMVTFTIGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L+  WGK SFW WL+GFY+AFMPLYILGFMG+TRR++H++
Sbjct: 428 AVFGYLAGFAFWFPKAFGFTLDEKWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A FG +LI  GI S +IQL VS R R  L D +GDPW GRTLEW+TSSPP
Sbjct: 488 NPLWKPYLVVAFFGAVLIFCGIASQLIQLFVSVRNRKQLADASGDPWEGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +   D++  MKK    + K   +Q I MPKNT  G  I++F+ + GFA +
Sbjct: 548 PFYNFAELPKVQDVDAFHDMKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAI 607

Query: 540 WHMW 543
           WH+W
Sbjct: 608 WHIW 611


>gi|58040342|ref|YP_192306.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter oxydans
           621H]
 gi|58002756|gb|AAW61650.1| Cytochrome o ubiquinol oxidase subunit I [Gluconobacter oxydans
           621H]
          Length = 662

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/586 (60%), Positives = 452/586 (77%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG++N +V
Sbjct: 68  MLFRGFADAIMMRTQLALAYKGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF+MT  GA+L+ ISLFIGEFA  GWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYMTLVGALLINISLFIGEFAQCGWLVYPPLSEMQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA CT +LI+ +FPVLT
Sbjct: 188 DYYIWAVQISGVGTLLTGVNFFTTIVKMRAPGMGWMQMPVFTWTAFCTTVLIMVSFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFTND GGN+M+Y+++IW WGHPEVYILV+P FG+FSEV +TFS 
Sbjct: 248 VTLALLSLDRYLGMHFFTNDAGGNVMLYLSMIWTWGHPEVYILVIPAFGVFSEVTATFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VW+HHFFTMG+GANVN FFGI TMII++PTG KIFNWL
Sbjct: 308 KPLFGYKTMVYATCSIMVLSFVVWVHHFFTMGAGANVNTFFGIMTMIIAVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F  P+ WT+GFMITF IGGM GV+LA+PAA+++LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRVEFTAPMHWTLGFMITFSIGGMTGVMLAMPAADWILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+ +WFPKAFG+KL   WGK +FW W +GFY+AF+PLY+LG  G+TRRM+H++
Sbjct: 428 VYFGYIAGMGFWFPKAFGFKLNEAWGKRAFWCWFVGFYLAFIPLYVLGLEGMTRRMNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +     W  +A  G ++IA+GI+  + QL VS R R+    +D+TGDPWNGRTLEWS SS
Sbjct: 488 NPDWYPWMLVAEVGAIVIALGIVCQLTQLYVSIRDRNLPENLDLTGDPWNGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA IP IH  D++   K+   K        I MPKNT+ G+ I +FS I+GFA 
Sbjct: 548 PPPAYNFAVIPDIHGLDTFHTEKQLGLKAHGKPLAPIHMPKNTSAGVFIGLFSFILGFAS 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +W++W L  I  I  +  +I  + N   +YY+   EI   E+   R
Sbjct: 608 IWYIWWLAAIGLIGIVATMILRSANRDVDYYVPVSEIEHNEEVYSR 653


>gi|152994132|ref|YP_001338967.1| cytochrome o ubiquinol oxidase subunit I [Marinomonas sp. MWYL1]
 gi|150835056|gb|ABR69032.1| Cytochrome o ubiquinol oxidase subunit I [Marinomonas sp. MWYL1]
          Length = 659

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/582 (61%), Positives = 447/582 (76%), Gaps = 1/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A+S     GYLPP HY+Q+FTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLLRGFADAVMMRLQLALSTNGGDGYLPPHHYDQVFTAHGVIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+GGAILV ISLF+GEFA TGW+ YPPL+G+  SP VGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLTAGGAILVNISLFVGEFAKTGWVAYPPLAGLEFSPDVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+ +N +AT+ KMRAPGMKLM+MPIFTWT    NILI A+FP+LT
Sbjct: 190 DYYIWALQISGIGTTLTAVNFLATVFKMRAPGMKLMDMPIFTWTCTWANILIAASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY+  HFFTND GGN MMY+NL W WGHPEVYILVLP FGIFSEVVSTF+ 
Sbjct: 250 VTLALLTLDRYLDFHFFTNDGGGNSMMYINLFWAWGHPEVYILVLPAFGIFSEVVSTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 310 KRLFGHKSMIWASGAISILGFIVWLHHFFTMGSSANVNAFFGMATMVIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLRVTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPK  G+KL    GK +FW WL+GF++AFMPLY+LGF+G+TRR++H +
Sbjct: 430 AVFGYLAGFVFWFPKVMGFKLNEKLGKAAFWCWLVGFFLAFMPLYVLGFLGMTRRLNHTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +    IW  IA  G  +I  GI+S ++QL VS+R R   +D TGDPWN  TLEW+TSSPP
Sbjct: 490 NPDWNIWLYIALVGAFVIMAGIISQLLQLYVSFRDRKDNLDTTGDPWNAHTLEWATSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D++  MK+    +  KD +  I MPKNT  GILIS    +MGFAL+
Sbjct: 550 QSYNFAVIPTVSDIDAFTDMKEKGEAYVRKDSYAPIHMPKNTASGILISGCVTVMGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L  +    + + ++   +    +YY+  +EI   E  
Sbjct: 610 WHIWWLAALGLFGSFVFLVIRAYTKDVDYYVQPDEIARTENA 651


>gi|299769504|ref|YP_003731530.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter oleivorans
           DR1]
 gi|298699592|gb|ADI90157.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter oleivorans
           DR1]
          Length = 663

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF+ITF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLITFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D+TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDLTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  +I +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVSAVISLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|260549404|ref|ZP_05823623.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter sp.
           RUH2624]
 gi|424055123|ref|ZP_17792646.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter
           nosocomialis Ab22222]
 gi|425742452|ref|ZP_18860561.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-487]
 gi|445430922|ref|ZP_21438681.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC021]
 gi|260407513|gb|EEX00987.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter sp.
           RUH2624]
 gi|407439048|gb|EKF45590.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter
           nosocomialis Ab22222]
 gi|425486958|gb|EKU53318.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-487]
 gi|444760550|gb|ELW85000.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC021]
          Length = 663

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDHTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHEPDGSGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  +I +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVSAVISLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|367473243|ref|ZP_09472807.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. ORS
           285]
 gi|365274426|emb|CCD85275.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. ORS
           285]
          Length = 666

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/588 (59%), Positives = 456/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMR QQA++F S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGTDAIMMRTQQAVAFHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL +GEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTASGALLVNVSLVVGEFARTGWLPFPPLSEVTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+I+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYIWALEISGVGTLVAGINLVTTVLKLRTRGMSYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SEVV+TFSS
Sbjct: 247 ATLTMLMLDRYFGFHFFTNEAGGNMMMFMNLIWAWGHPEVYILVLPAFGIYSEVVATFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G NVNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICVISFMVWLHHFFTMGAGPNVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW++GFMITF+IGG+ GV++AVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWSVGFMITFMIGGLTGVLVAVPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YWFPKAFG++L   WGK +FWF LIGFY  FMPLY++G +G+TRRM H++
Sbjct: 427 VLFGAFAGVTYWFPKAFGFRLYESWGKAAFWFTLIGFYATFMPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A FGT L+A+G++  I+QL+ S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWLAAATFGTALLAIGVILQILQLVFSIRDRALLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK---FPKDK-FQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   D++W +K+N        +DK +QDI +P+N+  G + + F+ +MGF
Sbjct: 547 PVFNFAVLPNVTGQDAYWRIKENAKSQQLHTRDKDYQDIELPRNSPTGFVCAFFATLMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W +  +  I      +   +     Y I + E+  I++  I 
Sbjct: 607 ALIWHIWWMVALGAIGAFATFVVFAWRDHDEYVIPAAEVARIDRGMIE 654


>gi|104780178|ref|YP_606676.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas entomophila
           L48]
 gi|95109165|emb|CAK13862.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas entomophila
           L48]
          Length = 673

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/586 (59%), Positives = 449/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A + G S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF++   G +LV ISL +GEFA TGW+ YPPL+GI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L T+DRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV STF+ 
Sbjct: 248 AALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I +L + VWLHHFFTMG+GA+VN FFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAIAILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  PI+WT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTAPIMWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + +  +A  G +LI  GI   +IQ+ VS R R   +D+TGDPW GRTLEWSTSSPP
Sbjct: 488 NPLWEPYLYVAVVGAVLILFGIACQLIQIYVSVRDRKDNMDVTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D+W   K+    +K P  K++ I MP NT+ G+ + +   + GFA 
Sbjct: 548 PFYNFAHMPEHVGLDAWHEAKQAGAAYKAPA-KYEAIHMPSNTSTGLFMGLLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +R++
Sbjct: 607 IWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMK 652


>gi|365888781|ref|ZP_09427520.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. STM
           3809]
 gi|365335538|emb|CCE00051.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. STM
           3809]
          Length = 666

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/588 (59%), Positives = 455/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMR QQA +F S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLIRGGTDAIMMRTQQAFAFHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL +GEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNVSLVVGEFARTGWLPFPPLSELTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+I+G+GTL+SGIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYIWALEISGVGTLVSGINLVTTVLKLRTRGMSYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SEVV+TFSS
Sbjct: 247 ATLTMLMLDRYFGFHFFTNEAGGNMMMFMNLIWAWGHPEVYILVLPAFGIYSEVVATFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICVVSFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW++GFMITF+IGG+ GV++AVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWSVGFMITFMIGGLTGVLVAVPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+ YWFPKAFG++L   WGK +FWF LIGFY+ FMPLY++G +G+TRRM H++
Sbjct: 427 VLFGVFAGVTYWFPKAFGFRLYESWGKAAFWFTLIGFYITFMPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A FGT L+A+G++  I+QL  S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWLAAATFGTALLAIGVILQILQLAFSIRDRELLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN----NFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   D++W +K+N            +QDI +PKN+  G + + F+ +MGF
Sbjct: 547 PVFNFAVLPNVTGQDAYWQIKENAKSQQLHVRDKDYQDIELPKNSPTGFVCAFFATVMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W +  +  I      +   +     Y I + E+  I+++ I+
Sbjct: 607 ALIWHIWWMVALGAIGAFATFVVFAWRDHDEYVIPAAEVARIDRQMIQ 654


>gi|148254606|ref|YP_001239191.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. BTAi1]
 gi|146406779|gb|ABQ35285.1| cytochrome bb3 quinol oxidase subunit 1 apoprotein [Bradyrhizobium
           sp. BTAi1]
          Length = 666

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/588 (58%), Positives = 456/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMR QQA++F S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLLRGGTDAIMMRTQQAVAFHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVVGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL +GEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNVSLVVGEFARTGWLPFPPLSELTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+I+G+GTL+SGIN++ T++K+R  GM  + MP+F WT L  N+LIVAAFP+LT
Sbjct: 187 DYYIWALEISGVGTLVSGINLVTTVLKLRTRGMSYLRMPMFCWTTLAANLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SEVV+TFSS
Sbjct: 247 ATLTMLMLDRYFGFHFFTNEAGGNMMMFMNLIWAWGHPEVYILVLPAFGIYSEVVATFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICVVSFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW++GFMITF+IGG+ GV++AVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWSVGFMITFMIGGLTGVLVAVPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+ YWFPKAFG++L   WGK +FWF LIGFY+ FMPLY++G +G+TRRM H++
Sbjct: 427 VLFGVFAGVTYWFPKAFGFRLYESWGKAAFWFTLIGFYMTFMPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A FGT L+A+G++  I+QL+ S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWLAAATFGTALLAIGVVLQILQLVFSIRDRERLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN----NFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   D++W +K+N      +  +  ++DI +P+N+  G + + F+ IMGF
Sbjct: 547 PVFNFAVLPNVTGQDAYWRIKENAKNQQLQTRERDYEDIELPRNSPTGFVCAFFATIMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W +  +  I      +   +     Y I + E+  I++  I 
Sbjct: 607 ALIWHIWWMVALGAIGAFATFVVFAWRDHEEYVIPAAEVARIDRGIIE 654


>gi|390576024|ref|ZP_10256103.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
 gi|389932007|gb|EIM94056.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia terrae
           BS001]
          Length = 657

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/583 (60%), Positives = 450/583 (77%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++     G+LPP HY+QIFTAHGVIMIFFVA P + G++N +V
Sbjct: 68  MLVRGFADAIMMRTQLALAGPGHEGFLPPHHYDQIFTAHGVIMIFFVATPFIVGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+A+PFLN +SFW+   G ILVM+SL +GEFA TGW+ YPPLS I  SPGVGV
Sbjct: 128 PLQIGARDMAYPFLNAVSFWLFVVGVILVMLSLGVGEFAQTGWVAYPPLSDIQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +G+GTLL+G+N+  TI+K+RAPGM LM MPIFTWT   T ++I+AAFP+LT
Sbjct: 188 DYYIWALQASGLGTLLTGVNLFVTILKLRAPGMTLMKMPIFTWTVFVTCVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   T+DRY+G HF+TN+LGGN  MYVNL+W WGHPEVYILVLP FGIFSEV +TFS 
Sbjct: 248 VALAALTVDRYLGFHFYTNELGGNPTMYVNLVWAWGHPEVYILVLPSFGIFSEVTATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I LLS++VWLHHFFTMGSGA+VN+FFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGLLSFLVWLHHFFTMGSGASVNSFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+ PILWT+ F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN II G
Sbjct: 368 FTMYQGRIEFKPPILWTLAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIAG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKAFG+KL    GK SFW W+IGFY+AFMPLY+LGFMG+TRR++H++
Sbjct: 428 ALFGYFAGFYYWFPKAFGFKLNERLGKYSFWCWVIGFYLAFMPLYMLGFMGMTRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   + Q+A  G + I  GIL  ++Q+IVS R R +  D+TGDPWN RTLEW+TSSPP
Sbjct: 488 NPAWTPYLQVALVGAVFILAGILLMVLQIIVSIRDRASNRDLTGDPWNARTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK   K    K+  I MP++T +  ++++F L++ FAL+W
Sbjct: 548 PFYNFAVVPRADKVDAFHEAKKLGLKMQPQKYAPIHMPRSTGVPFILNVFILLLCFALIW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W L   SF   +  +I  ++N   +Y++S+ E+  IE+ R+
Sbjct: 608 HIWWLVGASFAAAIATLILRSYNDDTDYFVSAAEVEGIERGRL 650


>gi|213646951|ref|ZP_03377004.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 630

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/537 (66%), Positives = 440/537 (81%), Gaps = 1/537 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGF 536
           P YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GF
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGF 604


>gi|146341761|ref|YP_001206809.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. ORS
           278]
 gi|146194567|emb|CAL78592.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. ORS
           278]
          Length = 666

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/588 (59%), Positives = 457/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMR QQA++F S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLLRGGTDAIMMRTQQAVAFHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL +GEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNVSLVVGEFARTGWLPFPPLSELTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+I+G+GTL+SGIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYIWALEISGVGTLVSGINLVTTVLKLRTQGMSYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SEVV+TFSS
Sbjct: 247 ATLTMLMLDRYFGFHFFTNEAGGNMMMFMNLIWAWGHPEVYILVLPAFGIYSEVVATFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICVVSFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW++GFMITF+IGG+ GV++AVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWSVGFMITFMIGGLTGVLVAVPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YWFPKAFG++L   WGK +FWF L GFYV FMPLY++G +G+TRRM H++
Sbjct: 427 VLFGAFAGVTYWFPKAFGFRLYESWGKAAFWFTLTGFYVTFMPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A  GT L+A+G++  I+QL+ S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWLAAATVGTALLAIGVILQILQLVFSIRDRALLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMK---KNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   D++W +K   KN  +  +D+ +QDI +PKN+  G + + F+ +MGF
Sbjct: 547 PVFNFAVLPNVTGQDAYWRIKENAKNQQRQTRDRDYQDIELPKNSPTGFVCAFFATVMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W +  +  I      +   +     Y I + E+  I+++ I 
Sbjct: 607 ALIWHIWWMVALGAIGAFATFVVFAWRDHDEYVIPAAEVARIDRRIIE 654


>gi|365885524|ref|ZP_09424522.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. ORS
           375]
 gi|365285823|emb|CCD97053.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. ORS
           375]
          Length = 661

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/588 (59%), Positives = 457/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMR QQA++F S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLIRGGTDAIMMRTQQAVAFHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL +GEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNVSLVVGEFARTGWLPFPPLSELTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+I+G+GTL+SGIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYIWALEISGVGTLVSGINLVTTVLKLRTRGMSYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SEVV+TFSS
Sbjct: 247 ATLTMLMLDRYFGFHFFTNEAGGNMMMFMNLIWAWGHPEVYILVLPAFGIYSEVVATFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICVVSFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW++GFMITF+IGG+ GV++AVP A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWSVGFMITFMIGGLTGVLVAVPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+ +G+ YWFPKAFG++L   WGK +FWF LIGFY  FMPLY++G +G+TRRM H++
Sbjct: 427 VLFGVFAGVTYWFPKAFGFRLYESWGKAAFWFTLIGFYATFMPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A  GT L+A+G++  I+QL  S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWLAAATVGTALLAIGVILQILQLAFSIRDRELLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMK---KNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   D++W +K   KN     +DK +QDI +P+N+  G + + F+ +MGF
Sbjct: 547 PVFNFAVLPNVTGQDAYWRIKENAKNQQLHTRDKDYQDIELPRNSPTGFVCAFFATVMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W +  +  I      +   +     Y I + E+  I+++ I+
Sbjct: 607 ALIWHIWWMVALGAIGAFATFVVFAWRDHDEYVIPAAEVARIDRQMIQ 654


>gi|347800402|dbj|BAK86303.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter tropicalis]
          Length = 663

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/587 (59%), Positives = 448/587 (76%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG+ NF+VP
Sbjct: 69  LFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFLAMAFMTGLFNFVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPFLNNLSFWMT+   ILV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFLNNLSFWMTAIAFILVNVSLFIGEFSQCGWLAYPPLSETQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA C +ILI+ +FPVLT 
Sbjct: 189 YYIWAIQLSGVGTLLTGVNFFVTIVKMRAPGMTWMKMPVFTWTAFCASILIMVSFPVLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY G HFFTND GGN MMY+NLIW WGHPEVYILV+P FG+FSEVV  FS K
Sbjct: 249 AVALLGLDRYFGMHFFTNDGGGNQMMYLNLIWAWGHPEVYILVIPAFGVFSEVVPAFSQK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY +MVYAT  I +LS++VW+HHFFTMG+G +VNAFFGI TM+ISIPTG K+FNW+F
Sbjct: 309 PLFGYGTMVYATCAIMILSFLVWVHHFFTMGAGPDVNAFFGIATMVISIPTGVKLFNWMF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI+F   + W +GFM+TF IGGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGV
Sbjct: 369 TMYKGRIQFHACMYWAVGFMVTFTIGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG + G+N+WFPK  G+KL   WG  +FWFW +GFY AF+PLY++GF G+TRR++H+++
Sbjct: 429 YFGYICGMNFWFPKVMGFKLNESWGIRAFWFWFVGFYFAFVPLYVVGFQGMTRRLNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A  G +LI  GI+  + QL VS R R+     D+TGDPWN R+LEWSTSSP
Sbjct: 489 PAWHPWLLVAEVGAVLILFGIVCQLTQLYVSIRDRNLPQNRDVTGDPWNARSLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPVYNFA +P +H+ D++ + K+N  + +     ++ I MPKNT  G L+  FSL++GFA
Sbjct: 549 PPVYNFALVPHVHELDAFMHDKENGIDTRRAGGPYEAIHMPKNTAAGFLVGAFSLVLGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            VW++W L  I  I  +  VI  + N   ++YI +EE+  IE +  R
Sbjct: 609 AVWYIWWLAAIGLIGVIGTVIARSANKDIDFYIPAEEVARIENEHSR 655


>gi|414341089|ref|YP_006982610.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter oxydans
           H24]
 gi|411026424|gb|AFV99678.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter oxydans
           H24]
          Length = 662

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/586 (60%), Positives = 451/586 (76%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR Q A+++  + GYLPP HY+Q+F+AHG IMIFF+AM  +TG++N +V
Sbjct: 68  MLFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQVFSAHGTIMIFFMAMAFMTGLLNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF+MT  GA+L+ ISLFIGEFA  GWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYMTLVGALLINISLFIGEFAQCGWLVYPPLSEMQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA CT +LI+A+FPVLT
Sbjct: 188 DYYIWAVQISGVGTLLTGVNFFTTIVKMRAPGMGWMQMPVFTWTAFCTTVLIMASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFTND GGN+M+Y+++IW WGHPEVYILV+P FG+FSEV STFS 
Sbjct: 248 VTLALLSLDRYLGMHFFTNDAGGNVMLYLSMIWTWGHPEVYILVIPAFGVFSEVTSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MVYAT  I +LS++VW+HHFFTMG+GANVN FFGI TM+I++PTG KIFNWL
Sbjct: 308 KPLFGYNTMVYATCSIMVLSFVVWVHHFFTMGAGANVNTFFGIMTMVIAVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F  P+ WTIGFMITF IGGM GV+LA+PAA+++LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRVEFTAPMYWTIGFMITFSIGGMTGVMLAMPAADWILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+ +WFPKAFG+KL   WGK +FW W +GFY+AF+PLYILG  G+TRRM+H++
Sbjct: 428 VYFGYIAGMGFWFPKAFGFKLNEAWGKRAFWCWFVGFYLAFIPLYILGLEGMTRRMNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +   + W  IA  G ++IA+GI+  + QL VS R R+    +D+TGDPW GRTLEWS SS
Sbjct: 488 NPDWRPWLLIAEAGAVVIALGIVCQLTQLYVSIRDRNLPENLDLTGDPWGGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA IP IH  D++   K+   +        I MPKNT  G +I  FS I+GF  
Sbjct: 548 PPPAYNFAVIPDIHGLDTFHTEKQLGRRAHNKPLAPIHMPKNTAAGAIIGAFSFILGFGA 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +W++W +  +  I   + +I  + N   +YY+   EI   E+   R
Sbjct: 608 IWYIWWMAGLGLIGIAVTMIMRSANRDVDYYVPVSEIEHNEEVYSR 653


>gi|1346940|sp|P98009.1|QOX1_ACEAC RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           A1 subunit 1; AltName: Full=Oxidase BA(3) subunit 1;
           AltName: Full=Ubiquinol oxidase polypeptide I
 gi|433187|dbj|BAA02481.1| ubiquinol oxidase subunit I [Acetobacter aceti]
 gi|229365478|dbj|BAH57986.1| ubiquinol oxidase subunit I [Acetobacter lovaniensis]
          Length = 664

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/588 (60%), Positives = 449/588 (76%), Gaps = 5/588 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG+ NFIVP
Sbjct: 69  LFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFLAMAFMTGLFNFIVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPFLNNLSFWMT+   ILV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFLNNLSFWMTAVAFILVNVSLFIGEFSQCGWLAYPPLSENQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++QI+G+GTLL+G+N   TI+KMRAPGM    MP+FTWTALC +ILI+ AFPVLT 
Sbjct: 189 YYIWAVQISGVGTLLTGVNFFVTIVKMRAPGMTWRKMPVFTWTALCASILIMVAFPVLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  +DRY G HFFTND GGN MMY+NLIW WGHPEVYILV+P FG+FSEVV  FS K
Sbjct: 249 AVGLLGMDRYFGMHFFTNDGGGNQMMYLNLIWAWGHPEVYILVIPAFGVFSEVVPAFSGK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGYS+MVYAT  I +LS++VW+HHFFTMG+G +VNAFFGI TMIISIPTG K+FNWLF
Sbjct: 309 PLFGYSTMVYATCSIMVLSFLVWVHHFFTMGAGPDVNAFFGIATMIISIPTGIKLFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI+F   + W +GFMITF IGGM GV+LA+P A+F+LHNSLFL+AHFHN IIGGV
Sbjct: 369 TMYKGRIQFHACMYWAVGFMITFTIGGMTGVMLAIPGADFVLHNSLFLIAHFHNTIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG + G+N+WFPK  G+KL+  WGK +FWFW +GFY AF+PLYI+GF G+TRR++H+++
Sbjct: 429 YFGYICGMNFWFPKVMGFKLDETWGKRAFWFWFVGFYCAFVPLYIVGFEGMTRRLNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A  G +L+ +GI   + QL VS R R+     D+TGDPWNGRTLEWSTSSP
Sbjct: 489 PAWHPWLLVAEVGAVLVMLGIACQLTQLYVSIRDRNLPQNRDVTGDPWNGRTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGI-LISIFSLIMGF 536
           PPVYNFA +P +H+ D++   K+N  + +    +++ I MPKNT+ G  L    +LI GF
Sbjct: 549 PPVYNFAIVPHVHELDTFMLDKENGIDTRQAGAQYEAIHMPKNTSFGSGLCKCSALIFGF 608

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A VW++W L  +  +  +  VI  + +   +YYI +EE+  IE +  R
Sbjct: 609 AAVWYIWWLAAVGLVGVIGTVIARSADKDIDYYIPAEEVARIENEHTR 656


>gi|453330846|dbj|GAC87173.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter
           thailandicus NBRC 3255]
          Length = 662

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/586 (60%), Positives = 451/586 (76%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR Q A+++  + GYLPP HY+Q+F+AHG IMIFF+AM  +TG++N +V
Sbjct: 68  MLFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQVFSAHGTIMIFFMAMAFMTGLLNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF+MT  GA+L+ ISLFIGEFA  GWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYMTLVGALLINISLFIGEFAQCGWLVYPPLSEMQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA CT +LI+A+FPVLT
Sbjct: 188 DYYIWAVQISGVGTLLTGVNFFTTIVKMRAPGMGWMQMPVFTWTAFCTTVLIMASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFTND GGN+M+Y+++IW WGHPEVYILV+P FG+FSEV STFS 
Sbjct: 248 VTLALLSLDRYLGMHFFTNDAGGNVMLYLSMIWTWGHPEVYILVIPAFGVFSEVTSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MVYAT  I +LS++VW+HHFFTMG+GANVN FFGI TM+I++PTG KIFNWL
Sbjct: 308 KPLFGYNTMVYATCSIMVLSFVVWVHHFFTMGAGANVNTFFGIMTMVIAVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F  P+ WTIGFMITF IGGM GV++A+PAA+++LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRVEFTAPMYWTIGFMITFSIGGMTGVMMAMPAADWILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+ +WFPKAFG+KL   WGK +FW W +GFY+AF+PLY+LG  G+TRRM+H++
Sbjct: 428 VYFGYIAGMGFWFPKAFGFKLNEAWGKRAFWCWFVGFYLAFVPLYVLGLEGMTRRMNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +   + W  IA  G ++IA+GI+  + QL VS R R+    +D+TGDPW GRTLEWS SS
Sbjct: 488 NPDWRPWLLIAEAGAIVIALGIVCQLTQLYVSIRDRNLPENLDLTGDPWGGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA IP IH  D++   K+   +        I MPKNT  G +I  FS I+GF  
Sbjct: 548 PPPAYNFAVIPDIHGLDTFHTEKQLGRRAHNKPLAPIHMPKNTAAGAIIGAFSFILGFGA 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VW++W +  +  I   + +I  + N   +YY+   EI   E+   R
Sbjct: 608 VWYIWWMAGLGLIGIAVTMIMRSANRDVDYYVPVSEIEHNEEVYSR 653


>gi|357030976|ref|ZP_09092920.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter morbifer
           G707]
 gi|356415670|gb|EHH69313.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter morbifer
           G707]
          Length = 662

 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/586 (60%), Positives = 452/586 (77%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG++N +V
Sbjct: 68  MLFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF+MT  G +L+ ISLFIGEFA  GWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYMTLVGGLLINISLFIGEFAQCGWLVYPPLSEMQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+G+GTLL+G+N  ATI+KMRAPGM  M MP+FTWTA CT +LI+ +FPVLT
Sbjct: 188 DYYIWAVQISGVGTLLTGVNFFATIVKMRAPGMGWMQMPVFTWTAFCTTVLIMVSFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFTND GGN+M+Y+++IW WGHPEVYILV+P FG+FSEV STFS 
Sbjct: 248 VTLALLSLDRYLGMHFFTNDAGGNVMLYLSMIWTWGHPEVYILVIPAFGVFSEVTSTFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VW+HHFFTMG+GANVN FFGI TM+I++PTG KI+NWL
Sbjct: 308 KPLFGYKTMVYATCSIMVLSFVVWVHHFFTMGAGANVNTFFGIMTMVIAVPTGVKIYNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F  P+ WTIGFMITF IGGM GV++A+PAA+++LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRVEFTTPMYWTIGFMITFSIGGMTGVMMAMPAADWILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+N+WFPKAFG+KL   WGK +FW W +GFY+AF+PLYILG  G+TRRM+H++
Sbjct: 428 VYFGYIAGMNFWFPKAFGFKLNETWGKRAFWCWFVGFYLAFIPLYILGLEGMTRRMNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +     W  +A  G ++IA+GI+  + QL VS R R+    +D+TGDPWNGRTLEWS SS
Sbjct: 488 NPDWYPWMLVAEAGAIVIALGIVCQLTQLYVSIRDRNLPENLDLTGDPWNGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P P YNFA IP IH  D++   K+   +    K   I MPKNT+ G  I +FSL +GFA 
Sbjct: 548 PAPAYNFAVIPDIHGLDTFHTEKQLGRQAHGKKLAPIHMPKNTSAGFFIGVFSLALGFAS 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VW++W L  I  I  +  VI  + +   +YY+   EI   E+   R
Sbjct: 608 VWYIWWLAAICAIGIIATVILRSADRDIDYYVPVSEIEHDEEVYSR 653


>gi|416018275|ref|ZP_11565269.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320323024|gb|EFW79114.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 670

 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/587 (59%), Positives = 450/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDAFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|303246928|ref|ZP_07333204.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio
           fructosovorans JJ]
 gi|302491635|gb|EFL51518.1| cytochrome o ubiquinol oxidase, subunit I [Desulfovibrio
           fructosovorans JJ]
          Length = 661

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/583 (57%), Positives = 457/583 (78%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQAI+ G+S G+LPP+H+NQIF+AHG IMI F+AMP +TG++N +V
Sbjct: 68  MLLRGFSDAILMRSQQAIAMGASQGFLPPDHFNQIFSAHGTIMILFMAMPFLTGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN +S W+T  GA+LVM+SL +GEF+  GW GY PL+  A SPG GV
Sbjct: 128 PQQIGARDVAFPFLNAVSLWLTVAGALLVMVSLGVGEFSKAGWSGYAPLTERAFSPGTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++WSLQIAG+G++L+G+N + T++ MRAPG++LM +P+FTWT++ TN+L++ +FPVLT
Sbjct: 188 DYWLWSLQIAGVGSVLTGVNFLVTVLMMRAPGLRLMRLPLFTWTSIFTNVLLIFSFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFF+N  GGN+M+Y NL W WGHPEVYI++LP FG+FSEVV+TFSS
Sbjct: 248 VALALVALDRYLGMHFFSNGFGGNMMLYTNLFWTWGHPEVYIVILPAFGVFSEVVATFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+S+VYAT  I  LS+ VW+HHFFTMG+  NVN FFGI+TM+I+IPTG K+FNWL
Sbjct: 308 KRIFGYTSLVYATAAIMFLSFAVWVHHFFTMGASVNVNIFFGISTMLIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR   P+ WTIGF+ TFV+GG+ GV++++P A++++HNSLFL+AHFHN++I G
Sbjct: 368 FTMYRGRIRLTTPLYWTIGFLTTFVLGGLTGVLMSIPPADYVVHNSLFLIAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPKAFG+ L+  WGK +FW WLIGFY+AF+PLYILGFMG+ RR+ H++
Sbjct: 428 TLFGFLAGYVYWFPKAFGFTLDETWGKRTFWCWLIGFYLAFVPLYILGFMGMPRRLQHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q    IAA GTL+I  GI   ++QL+VS + R   +D+TGDPW+GRTLEW+TSSPP
Sbjct: 488 NPAWQPLLIIAAVGTLIILCGIGCMLMQLVVSLKNRQANLDVTGDPWDGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
            +YNFA IP++H  D++W MK+    + + D ++DI MPKNT  G +I I + + GFA++
Sbjct: 548 AIYNFATIPVVHDIDAFWDMKEKGIAYARPDHYEDIEMPKNTGYGFIIGILAFLFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L +   +  ++ VI    +   +Y I + E+  IE +R
Sbjct: 608 WHIWWLALTGLLGIVVAVIARAGDDDIHYVIPAAEVERIENQR 650


>gi|422671440|ref|ZP_16730806.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aceris str. M302273]
 gi|330969180|gb|EGH69246.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aceris str. M302273]
          Length = 670

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/587 (59%), Positives = 450/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +LS++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILSFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|127511301|ref|YP_001092498.1| cytochrome-c oxidase [Shewanella loihica PV-4]
 gi|126636596|gb|ABO22239.1| Cytochrome-c oxidase [Shewanella loihica PV-4]
          Length = 662

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/585 (59%), Positives = 449/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA+MMR QQA++   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 71  MLIRGFSDAIMMRTQQAMATNGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNLVL 130

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+T+ GA+L+ ISL +GEFA TGW+ YPPLS +A SPGVGV
Sbjct: 131 PLQIGARDVAFPFLNNLSFWLTASGAVLINISLGVGEFAKTGWVAYPPLSELAYSPGVGV 190

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGT L+G+N + T++KMRAPGMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 191 DYYIWALQISGIGTTLTGVNFLVTVLKMRAPGMKLMQMPIFTWTCTWANILIVASFPILT 250

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN+ GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF++
Sbjct: 251 AVLAMLTLDRYMDFHFFTNEGGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTA 310

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+A+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+FNWL
Sbjct: 311 KRLFGYKSMVWASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWL 370

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR++  VP+LWT+GFM+TF IGGM GV+LAVP A+++LHNSLFL+AHFHN IIGG
Sbjct: 371 FTIYRGRLKLTVPVLWTLGFMVTFTIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGG 430

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+ L    GK +FW W  GFYVAFMPLY+LGF+G+TRR++  +
Sbjct: 431 AVFGYLAGFAFWFPKATGFHLNERLGKAAFWCWQAGFYVAFMPLYVLGFLGMTRRLNQTD 490

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     W  +AA G  +I +GI+   +QL VS R R    D TGDPWNG TLEWST+SPP
Sbjct: 491 NPDWNFWIYLAAVGACIIFVGIVLQFVQLYVSIRDREQNRDTTGDPWNGHTLEWSTASPP 550

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++ + K+    +  ++ +Q I MPKNT  G+ +++     GFA +
Sbjct: 551 QFYNFARLPKVVDIDAFTHAKEQGQAYQMQESYQPIHMPKNTGHGVWMALGITAAGFAAI 610

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+  L I  F+   I+ +   ++   +YY+  +E+  IE   + 
Sbjct: 611 WHILWLAIAGFLGAFIVFLMRAYDTDTDYYVQGDEVKRIETAHLN 655


>gi|410943964|ref|ZP_11375705.1| cytochrome o ubiquinol oxidase subunit I [Gluconobacter frateurii
           NBRC 101659]
          Length = 662

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/586 (60%), Positives = 449/586 (76%), Gaps = 2/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +TG++N +V
Sbjct: 68  MLFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMTGLLNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSF+MT  GA+L+ ISLFIGEFA  GWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFYMTLVGALLINISLFIGEFAQCGWLVYPPLSEMQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M MP+FTWTA CT +LI+A+FPVLT
Sbjct: 188 DYYIWAVQISGVGTLLTGVNFFTTIVKMRAPGMGWMQMPVFTWTAFCTTVLIMASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L +LDRY+G HFFTND GGN+M+Y+++IW WGHPEVYILV+P FG+FSEV STFS 
Sbjct: 248 VTLALLSLDRYLGMHFFTNDAGGNVMLYLSMIWTWGHPEVYILVIPAFGVFSEVTSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MVYAT  I +LS++VW+HHFFTMG+GANVN FFGI TM+I++PTG KIFNWL
Sbjct: 308 KPLFGYNTMVYATCSIMVLSFVVWVHHFFTMGAGANVNTFFGIMTMVIAVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+ F  P+ WTIGFMITF IGGM GV+LA+PAA+++LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRVEFTAPMYWTIGFMITFSIGGMTGVMLAMPAADWILHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+ +WFPKAFG+KL   WGK +FW W IGFY+AF+PLYILG  G+TRRM+H+ 
Sbjct: 428 VYFGYIAGMGFWFPKAFGFKLNEAWGKRAFWCWFIGFYLAFVPLYILGLEGMTRRMNHYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           +     W  +A  G ++IA+GI+  + QL VS R R+    +D+TGDPW GRTLEWS SS
Sbjct: 488 NPDWYPWMLVAEAGAIVIALGIVCQLTQLYVSIRDRNLPENLDLTGDPWGGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP YNFA IP IH  D++   K+   +        I MPKNT  G +I  FS I+GF  
Sbjct: 548 PPPAYNFAVIPDIHGLDTFHTEKQLGRRAHNKPLAPIHMPKNTAAGAIIGAFSFILGFGA 607

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           +W++W +  +  I   + +I  + N   +YY+   EI   E+   R
Sbjct: 608 IWYIWWMAGLGLIGIAVTMIMRSANRDVDYYVPVSEIEHNEEVYSR 653


>gi|384920407|ref|ZP_10020415.1| cytochrome o ubiquinol oxidase, subunit I [Citreicella sp. 357]
 gi|384465675|gb|EIE50212.1| cytochrome o ubiquinol oxidase, subunit I [Citreicella sp. 357]
          Length = 664

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/581 (62%), Positives = 459/581 (79%), Gaps = 2/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DA+MMR QQA++ G + GYLPP HY+Q+FTAHGVIMIFFVAMP VTG++N+++
Sbjct: 82  MMVRGFADALMMRAQQAMAAGGAEGYLPPHHYDQVFTAHGVIMIFFVAMPFVTGVMNYVM 141

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT  GA+LV +SLF+GEFA  GWL +PPLSG + S G G+
Sbjct: 142 PLQIGARDVAFPFLNNFSFWMTVAGALLVNVSLFVGEFARVGWLAFPPLSGASYSTGPGM 201

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQIAG+GT LSGIN+IATI+KMRAPGMKL +MPIFTWTAL TN+LIVAAFPVLT
Sbjct: 202 DYYLWALQIAGVGTTLSGINLIATILKMRAPGMKLFDMPIFTWTALVTNVLIVAAFPVLT 261

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+G HFFTND GGN MMY+NLIWIWGHPEVYIL++P FGI SE+VSTFS 
Sbjct: 262 ATLALLTLDRYLGFHFFTNDFGGNAMMYINLIWIWGHPEVYILIIPCFGIISEIVSTFSG 321

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K +FGY +MV+AT  I +LS++VWLHHFFTMGSGA+VN FFGITTMII++PTG KIFNWL
Sbjct: 322 KPIFGYRTMVWATACIMVLSFVVWLHHFFTMGSGASVNTFFGITTMIIAVPTGVKIFNWL 381

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RFE+P+LW +GF++TF IGGM GV+LA+P  +F LHN+LFL+AHFHNVIIGG
Sbjct: 382 FTMYKGRVRFELPMLWAVGFLVTFTIGGMTGVMLAIPPVDFQLHNTLFLIAHFHNVIIGG 441

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + +G+ YW+PKAFG+KL   WG+ +FW W IGFYVAFMPLY LG MGVTRRM+ + 
Sbjct: 442 VVFAIYAGVVYWWPKAFGFKLNETWGRRAFWGWFIGFYVAFMPLYALGLMGVTRRMNSYP 501

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D   Q +F +AA G ++I +GILS  +   VS R R  L  +  DPW+ RTLEW+T SPP
Sbjct: 502 DAGWQPYFIVAAIGAVIILLGILSTFVCFYVSIRDRKAL-AVGNDPWDARTLEWATQSPP 560

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNF     +   +++W MK++ F +  D +  I MPK T  G+++S  + + GFA+VW
Sbjct: 561 APYNFPHDIEVVGREAFWRMKRHGFAWSTD-YAPIHMPKGTATGVILSAVAFVFGFAMVW 619

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           ++W L  ++F+  + I I +TFNY R+Y I  +E+   E K
Sbjct: 620 YVWWLAALTFVAMIAIGIGHTFNYNRDYDIPVDEVRRTEAK 660


>gi|301049632|ref|ZP_07196583.1| Ubiquinol oxidase subunit 1 [Escherichia coli MS 185-1]
 gi|300298625|gb|EFJ55010.1| Ubiquinol oxidase subunit 1 [Escherichia coli MS 185-1]
          Length = 554

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/541 (65%), Positives = 434/541 (80%), Gaps = 1/541 (0%)

Query: 43  MIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTG 102
           MIFFVAMP V G++N +VPLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TG
Sbjct: 1   MIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTG 60

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           WL YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FT
Sbjct: 61  WLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFT 120

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           W +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYI
Sbjct: 121 WASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYI 180

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           L+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFG
Sbjct: 181 LILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFG 240

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           ITTMII+IPTG KIFNWLFTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+
Sbjct: 241 ITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFV 300

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFM
Sbjct: 301 LHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFM 360

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDI 462
           PLY LGFMG+TRR+S   D        IAA G +LIA+GIL  +IQ+ VS R R    D+
Sbjct: 361 PLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDL 420

Query: 463 TGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNT 521
           TGDPW GRTLEW+TSSPPP YNFA +P +H+ D++W MK+    + K D +++I MPKN+
Sbjct: 421 TGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNS 480

Query: 522 NIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
             GI+I+ FS I GFA++WH+W L I+ F   +I  I  +F+   +YY+   EI  +E +
Sbjct: 481 GAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQ 540

Query: 582 R 582
            
Sbjct: 541 H 541


>gi|422665363|ref|ZP_16725235.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330975781|gb|EGH75847.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 670

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/587 (58%), Positives = 450/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +LS++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILSFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDVDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAMRDDQGYMVPAEDVARIEGEHHKV 653


>gi|71733625|ref|YP_273477.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257487316|ref|ZP_05641357.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
 gi|289623936|ref|ZP_06456890.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aesculi str. NCPPB 3681]
 gi|289646770|ref|ZP_06478113.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|416025445|ref|ZP_11569179.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|422403597|ref|ZP_16480654.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|422579919|ref|ZP_16655434.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|422597810|ref|ZP_16672079.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|71554178|gb|AAZ33389.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320329853|gb|EFW85841.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330870266|gb|EGH04975.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330874426|gb|EGH08575.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330988096|gb|EGH86199.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 670

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 450/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDAFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|424066345|ref|ZP_17803811.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
 gi|424070993|ref|ZP_17808421.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
 gi|407999735|gb|EKG40113.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
 gi|408002408|gb|EKG42665.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
          Length = 670

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAMRDDQGYMVPAEDVARIEGEHHKV 653


>gi|66044393|ref|YP_234234.1| cytochrome-c oxidase [Pseudomonas syringae pv. syringae B728a]
 gi|63255100|gb|AAY36196.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Pseudomonas
           syringae pv. syringae B728a]
          Length = 670

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|344209227|ref|YP_004794368.1| cytochrome o ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia JV3]
 gi|343780589|gb|AEM53142.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas
           maltophilia JV3]
          Length = 658

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/583 (61%), Positives = 446/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGVGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +GIGTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGIGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P  K+  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAASL 650


>gi|27377826|ref|NP_769355.1| oxidase [Bradyrhizobium japonicum USDA 110]
 gi|30173516|sp|P98057.2|COX14_BRAJA RecName: Full=Probable cytochrome c oxidase subunit 1; AltName:
           Full=Cytochrome c oxidase polypeptide I; AltName:
           Full=Fourth terminal oxidase
 gi|27350971|dbj|BAC47980.1| oxidase [Bradyrhizobium japonicum USDA 110]
          Length = 666

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/584 (59%), Positives = 456/584 (78%), Gaps = 5/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLSG++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVIGEFARTGWLAFPPLSGLSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVAGINLVTTVLKLRTKGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF  P+LW +GFM+TF+IGG+ GV++AVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRIRFATPMLWAVGFMVTFIIGGLTGVLVAVPPADFMLHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L+  WGK +FWF  +GFYV FMPLYI G +G+TRR+ H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLDERWGKLAFWFTFLGFYVTFMPLYIAGMLGMTRRLQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             + + W  +AA G  ++ +G++  I+QL+VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAAWRPWMLVAAAGMAVLTIGVICQIMQLVVSIRNREALRDRTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMK----KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFAF P +   D++W MK    + +F+    ++ DI MP+N+  G + + F+ IMGF
Sbjct: 547 PVFNFAFSPDVRGEDAYWDMKTHARQQSFEHDAPEYHDIEMPRNSPTGFICAFFATIMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           AL+WH+W + I+  I      +   +     Y I ++E+  I++
Sbjct: 607 ALIWHIWWMVILGGIGAFATFVVFAWRDHDEYVIPADEVARIDR 650


>gi|298159567|gb|EFI00612.1| Cytochrome O ubiquinol oxidase subunit I [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 670

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG  LEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHALEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDAFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|332187363|ref|ZP_08389101.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas sp. S17]
 gi|332012524|gb|EGI54591.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas sp. S17]
          Length = 670

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/588 (60%), Positives = 454/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQAI++G+  GYLPP+HY+QIF+AHG IMIFFVAMP + G++NF+V
Sbjct: 70  MLLRGFSDALLMRSQQAIAYGND-GYLPPDHYDQIFSAHGTIMIFFVAMPFMIGLMNFVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++SFW+T  GA+LV +SL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 129 PLQLGVRDVAFPTLNSVSFWLTCSGALLVNMSLVIGEFAKTGWLVYPPLSELRFSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY W+LQI+G+GTLL+G+NM+ TI+KMRAPGM    MP+FTWT+L +N+LIVAAFPVLT
Sbjct: 189 DYYCWALQISGVGTLLAGVNMVTTILKMRAPGMGYSRMPMFTWTSLASNLLIVAAFPVLT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFT ++GGN MM+VNLIW WGHPEVYIL+LP FGIFSEV+STFSS
Sbjct: 249 ACLAMLLLDRYLGFHFFTPEMGGNQMMFVNLIWAWGHPEVYILILPAFGIFSEVISTFSS 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+VI +LS++VWLHHFFTMG+GA+VN FFGITTMII++PTG K+FNWL
Sbjct: 309 KPLFGYRSMVIATMVICILSFMVWLHHFFTMGAGADVNGFFGITTMIIAVPTGVKVFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF   +LW+IGF++TFVIGGM GV+LAVP A+F+LHNSLFLVAHFHNVIIGG
Sbjct: 369 FTMYGGRIRFTSMMLWSIGFIVTFVIGGMTGVMLAVPPADFVLHNSLFLVAHFHNVIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  +WFPK FG+ L+  WGK +FW W+ GFY+AFMPLY+LG MG+TRRM H++
Sbjct: 429 VLFGAFAGFTFWFPKMFGFTLDETWGKRAFWLWISGFYLAFMPLYVLGLMGMTRRMQHYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W   A FG LLI  GI   I  L VS + R   ID +GDPW+GRTLEW T+SPP
Sbjct: 489 VPGWHPWLIAAGFGALLILAGIACQIRMLYVSIKTRGDRIDESGDPWDGRTLEWITTSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMK---KNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFA +P +   +++W +K   + N +      ++ I MP+N+  G++ + F+  MGF
Sbjct: 549 PVFNFAVLPDVKGEEAYWGIKAKARENHRLSDCPDYEPIEMPRNSPTGVVAAFFATAMGF 608

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W L I+ F       +   +  +  Y I  EE+  +++ R R
Sbjct: 609 ALIWHIWWLVILGFFGAWGTFVVFAWRDEAEYEIPVEEVERLDQARRR 656


>gi|194367566|ref|YP_002030176.1| cytochrome o ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia R551-3]
 gi|194350370|gb|ACF53493.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas
           maltophilia R551-3]
          Length = 658

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/583 (61%), Positives = 446/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGVGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +GIGTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGIGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDVTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P  K+  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAANL 650


>gi|456737088|gb|EMF61810.1| Cytochrome O ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia EPM1]
          Length = 658

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/583 (61%), Positives = 446/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL IGEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGIGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +GIGTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGIGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P  K+  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAASL 650


>gi|440744397|ref|ZP_20923700.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae
           BRIP39023]
 gi|440373815|gb|ELQ10558.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae
           BRIP39023]
          Length = 670

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 450/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ ISL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINISLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTPPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D++   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDAFTDAKRAGTAYKVPA-RYSAIHMPNNTPTGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|424670604|ref|ZP_18107628.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas
           maltophilia Ab55555]
 gi|401070438|gb|EJP78953.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas
           maltophilia Ab55555]
          Length = 658

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/583 (61%), Positives = 446/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL IGEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGIGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +GIGTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGIGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P  K+  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAANL 650


>gi|340777340|ref|ZP_08697283.1| cytochrome o ubiquinol oxidase subunit I [Acetobacter aceti NBRC
           14818]
          Length = 663

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/587 (59%), Positives = 445/587 (75%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           L RGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  +T + NF+VP
Sbjct: 69  LVRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMTALFNFVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPFLNNLSFWMT+    L+ +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFLNNLSFWMTAVAFALINVSLFIGEFSQCGWLAYPPLSENQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++QI+G+GTLL+G+N   TI+KMRAPGM  M +P+FTWTA C ++LI+ AFPVLT 
Sbjct: 189 YYIWAVQISGVGTLLTGVNFFVTIVKMRAPGMTWMKIPVFTWTAFCASVLIMIAFPVLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY G HFFTND GGN M+Y++LIW WGHPEVYILV+P FG+FSEVV  FS K
Sbjct: 249 AIALLGLDRYFGMHFFTNDGGGNQMLYLSLIWTWGHPEVYILVIPAFGVFSEVVPAFSQK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            +FGY++MVYAT  I +LS++VW+HHFFTMG+GA+VNAFFGI TMIISIPTG K+FNWLF
Sbjct: 309 PIFGYATMVYATCAIMVLSFVVWVHHFFTMGAGADVNAFFGIATMIISIPTGVKLFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GR+ F   + W +GFMITF IGGM GV++A+PAA+F+LHNSLFL+AHFHNVIIGGV
Sbjct: 369 TMYKGRVEFHATMYWAVGFMITFTIGGMTGVMMAIPAADFVLHNSLFLIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG + G+N+WFPK FG+KL   WGK +FW W +GFY AF+PLY+LGF G+TRR++H+ +
Sbjct: 429 YFGYICGMNFWFPKVFGFKLNETWGKRAFWCWFVGFYFAFVPLYVLGFEGMTRRLNHYSN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSSP 479
            +   W  IA  G ++I  GI+  + QL VS R  +     D+TGDPWNGR+LEWSTSSP
Sbjct: 489 PAWHPWLLIAEIGAVMILFGIVCQVTQLYVSIRDMNLAENRDVTGDPWNGRSLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+N  + +     +Q I MPKNT  G L+  FS ++GFA
Sbjct: 549 PPPYNFAIVPHVHEFDAFMHDKENGIDTRQAGGPYQPIHMPKNTAAGFLVGAFSFVLGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            +W++W L  I+ +     VI  + N   +YYI +EE+  IE +  R
Sbjct: 609 AIWYIWWLAAIALVGVFATVIARSANQDVDYYIPAEEVARIENEHSR 655


>gi|422629827|ref|ZP_16695029.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|440720211|ref|ZP_20900630.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae
           BRIP34876]
 gi|440726339|ref|ZP_20906593.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae
           BRIP34881]
 gi|443645205|ref|ZP_21129055.1| Cytochrome O ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           syringae B64]
 gi|330939014|gb|EGH42486.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|440366247|gb|ELQ03331.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae
           BRIP34876]
 gi|440366500|gb|ELQ03579.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae
           BRIP34881]
 gi|443285222|gb|ELS44227.1| Cytochrome O ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           syringae B64]
          Length = 670

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDVDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAMRDDQGYMVPAEDVARIEGEHHKV 653


>gi|254522369|ref|ZP_05134424.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas sp.
           SKA14]
 gi|219719960|gb|EED38485.1| cytochrome o ubiquinol oxidase, subunit I [Stenotrophomonas sp.
           SKA14]
          Length = 649

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/583 (61%), Positives = 446/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 59  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 118

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 119 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGVGEFAMTGWVAYPPLSGIEFSPGVGV 178

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +G+GTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 179 DYYIWALQASGVGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 238

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 239 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 298

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 299 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 358

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 359 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 418

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 419 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 478

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 479 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPP 538

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P  K+  I MPKNT + ++++I+ L++ FALVW
Sbjct: 539 PFYNFAVVPKADELDAFHEAKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVW 598

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 599 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAANL 641


>gi|289678125|ref|ZP_06499015.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           syringae FF5]
          Length = 670

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDVDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAMRDDQGYMVPAEDVARIEGEHHKV 653


>gi|190576214|ref|YP_001974059.1| ubiquinol oxidase polypeptide I [Stenotrophomonas maltophilia
           K279a]
 gi|190014136|emb|CAQ47775.1| putative ubiquinol oxidase polypeptide I [Stenotrophomonas
           maltophilia K279a]
          Length = 658

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/583 (61%), Positives = 446/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGVGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +G+GTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGVGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P  K+  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAANL 650


>gi|374334061|ref|YP_005090748.1| cytochrome-c oxidase [Oceanimonas sp. GK1]
 gi|372983748|gb|AEX99997.1| cytochrome-c oxidase [Oceanimonas sp. GK1]
          Length = 661

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/585 (60%), Positives = 445/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A+S   + GYLPPEHY+QIFTAHGVIMI F+AMP + G++N ++
Sbjct: 70  MLIRGFADAIMMRAQLALSTNGADGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIVL 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+   GA+LV ISL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 130 PLQIGARDVAFPFLNNLSFWLAVSGAVLVNISLGLGEFAKTGWVAYPPLSELDFSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQI+GIGTLL+G+N + T+ KMR  GMKLM MPIFTWT    NILIVA+FP+LT
Sbjct: 190 DYYIWALQISGIGTLLTGVNFLVTVFKMRTHGMKLMQMPIFTWTCTWANILIVASFPILT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + TLDRY+  HFFTN  GGN MMY+NL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 250 AVLGMLTLDRYLDFHFFTNAAGGNAMMYINLFWAWGHPEVYILILPAFGIFSEVISTFTG 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TMII++PTG K+FNWL
Sbjct: 310 KRLFGYNSMVYASGAISVLGFIVWLHHFFTMGSSANVNAFFGVMTMIIAVPTGVKLFNWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+R  VP+LWT+GFM TF IGGM GV+LAVP A+F+LHNSLFL+AHFHN IIGG
Sbjct: 370 FTMYRGRLRMTVPVLWTLGFMTTFTIGGMTGVLLAVPGADFVLHNSLFLIAHFHNTIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKA G+ L+   GK SFW W IGFYVAFMPLY+LGF+G+TRR++  +
Sbjct: 430 AVFGYLAGFAFWFPKAMGFHLDEKLGKVSFWCWQIGFYVAFMPLYVLGFLGMTRRLNSTD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   W  +AA G + I +GIL    QL  ++R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 490 NPAWNFWLYLAAVGAVFILVGILVQFYQLYKAFRDREQNKDLTGDPWNGHTLEWSTSSPP 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++  MK+    +  +  +Q I MPKNT  G+LI+  +   GF  +
Sbjct: 550 QFYNFAKLPHVSDIDAFTDMKEKGTAYKVQGNYQPIHMPKNTACGVLIAAAATAAGFGAI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W + I   + + ++ +   ++   +YY+  +E+  IE+  +R
Sbjct: 610 WHIWWMVIAGLVASFVVFLCRAYDTDTDYYVQPDEVERIEQAHLR 654


>gi|386396939|ref|ZP_10081717.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM1253]
 gi|385737565|gb|EIG57761.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM1253]
          Length = 666

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/588 (58%), Positives = 456/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLS ++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVIGEFARTGWLAFPPLSELSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVAGINLVTTVLKLRTKGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII+IPTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPDVNAIFGIASMIIAIPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFE P+LW+IGFM+TF+IGG+ GV++AVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRIRFETPMLWSIGFMVTFIIGGLTGVLVAVPPADFILHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L   WGK +FWF  +GFYV F+PLY+ G +G+TRRM H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLNDRWGKLAFWFTFLGFYVTFIPLYVAGMLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             + + W  +AA G  ++ +G++  I+QL+VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAAWRPWMLVAAVGMAVLTIGVICQIMQLVVSIRNREALRDHTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWW----YMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFAF P +   D++W    + K+ + +    ++ DI MP+N+  G + + F+ +MGF
Sbjct: 547 PVFNFAFNPDVRGEDAYWDLKAHAKQQSLQHDAPEYHDIEMPRNSPTGFVCAFFATVMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W + I+  I      +   +     Y I +EE+  I++  + 
Sbjct: 607 ALIWHIWWMVILGGIGAFATFVVFAWRDHDEYVIPAEEVAAIDRVNLE 654


>gi|302186055|ref|ZP_07262728.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           syringae 642]
          Length = 670

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDNNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    +K P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYKVPA-RYSAIHMPNNTATGLYMGMLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|473502|gb|AAA26210.1| oxidase [Bradyrhizobium japonicum]
          Length = 666

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/584 (58%), Positives = 455/584 (77%), Gaps = 5/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N +V
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLSG++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVIGEFARTGWLAFPPLSGLSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++ IN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVADINLVTTVLKLRTKGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF  P+LW +GFM+TF+IGG+ GV++AVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRIRFATPMLWAVGFMVTFIIGGLTGVLVAVPPADFMLHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L+  WGK +FWF  +GFYV FMPLYI G +G+TRR+ H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLDERWGKLAFWFTFLGFYVTFMPLYIAGMLGMTRRLQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             + + W  +AA G  ++ +G++  I+QL+VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAAWRPWMLVAAAGMAVLTIGVICQIMQLVVSIRNREALRDRTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMK----KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFAF P +   D++W MK    + +F+    ++ DI MP+N+  G + + F+ IMGF
Sbjct: 547 PVFNFAFSPDVRGEDAYWDMKTHARQQSFEHDAPEYHDIEMPRNSPTGFICAFFATIMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           AL+WH+W + I+  I      +   +     Y I ++E+  I++
Sbjct: 607 ALIWHIWWMVILGGIGAFATFVVFAWRDHDEYVIPADEVARIDR 650


>gi|116515214|ref|YP_802843.1| CyoB [Buchnera aphidicola BCc]
 gi|116257068|gb|ABJ90750.1| cytochrome o ubiquinol oxidase subunit I [Buchnera aphidicola BCc]
          Length = 657

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/587 (62%), Positives = 451/587 (76%), Gaps = 4/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAIS-FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           M  RGF+DA++MRLQQ  S           +HY+Q+FTAHGVIMIFFVAMPLV G++N +
Sbjct: 68  MFLRGFSDAIIMRLQQFFSSLPEHTSIFSSDHYDQVFTAHGVIMIFFVAMPLVIGLMNLV 127

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARD+AFP LNN+SFW+T+  ++L+MISL +GEFA TGWLGYPPLSGI  SPGVG
Sbjct: 128 IPLQIGARDLAFPVLNNISFWLTASSSVLLMISLGVGEFAKTGWLGYPPLSGIIYSPGVG 187

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDY+IW LQI+GIGT+L+ IN I TII +RAPGM +  +P+FTWT+LCTNILI+ +FPVL
Sbjct: 188 VDYWIWVLQISGIGTILTSINFIVTIINLRAPGMSMFKLPVFTWTSLCTNILILISFPVL 247

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
              L   +LDRY G HFFTNDLGGN+M+YVNLIWIWGHPEVYIL+LP+FGIFSEVVSTFS
Sbjct: 248 FITLLFLSLDRYAGFHFFTNDLGGNMMLYVNLIWIWGHPEVYILILPIFGIFSEVVSTFS 307

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
            K LFGY S+++AT+VIT+LS+IVWLHHFFTMGSGANVN+FF ITTMII+IPTG KIFNW
Sbjct: 308 EKSLFGYISLIWATIVITVLSFIVWLHHFFTMGSGANVNSFFSITTMIIAIPTGVKIFNW 367

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTM+RGRIRF   +LWTIGF+I+F IGGMAGV+L++P  +F+LHNSLFLVAHFHNVIIG
Sbjct: 368 LFTMFRGRIRFHSSMLWTIGFLISFTIGGMAGVLLSIPPIDFVLHNSLFLVAHFHNVIIG 427

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+FG  +GI YWFPK FG+KL  +WGKC+F FW+ GF+ AFMPLYILG MG+TRR+S  
Sbjct: 428 GVVFGCFAGITYWFPKIFGFKLNEYWGKCAFVFWITGFFTAFMPLYILGCMGMTRRLSQN 487

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTS 477
            D        I+A G   I +GIL  IIQ+IVS + R+TL   D TGDPWNGRTLEWS  
Sbjct: 488 IDCEYHGLLTISAIGVFFIFLGILFQIIQIIVSIKNRNTLEYKDNTGDPWNGRTLEWSIP 547

Query: 478 SPPPVYNFAFIPLIHQSDSWWYMK-KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           SPPP+YNFA IP I   D++W+ K  N      + F  I MP N+  GI I   S   GF
Sbjct: 548 SPPPIYNFAIIPQIKTIDNFWFDKVNNKGNIKNNIFTKIHMPSNSYFGIAIGCCSTFFGF 607

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           ++VWH+W L  +S      I++   F + + Y+IS ++I  IE K +
Sbjct: 608 SIVWHIWWLVWVSLFGIFFILLKKFFTFDKGYFISIKKIKDIENKHL 654


>gi|383773519|ref|YP_005452585.1| putative cytochrome o ubiquinol oxidase chain I protein
           [Bradyrhizobium sp. S23321]
 gi|381361643|dbj|BAL78473.1| putative cytochrome o ubiquinol oxidase chain I protein
           [Bradyrhizobium sp. S23321]
          Length = 666

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/588 (58%), Positives = 455/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLS ++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVIGEFARTGWLAFPPLSELSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVAGINLVTTVLKLRTRGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPDVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF  P+LW +GFM+TF+IGG+ GV+LAVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRFTTPMLWAVGFMVTFIIGGLTGVLLAVPPADFMLHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L+  WGK +FWF  +GFYV F+PLY+ G +G+TRRM H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLDERWGKAAFWFTFLGFYVTFVPLYVAGMLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             + + W  IAA G  ++ +G++  I+QL+VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAAWRPWMLIAAAGMAVLTIGVICQIVQLVVSIRTREALRDRTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD----KFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFAF P +   D++W MK +  +   D    ++ DI MP+N+  G + + F+ IMGF
Sbjct: 547 PVFNFAFHPDVRGEDAYWDMKAHAQQQSLDSSPPEYHDIEMPRNSPTGFVCAFFATIMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W + I+  I      +   +     Y I ++E+  IE+  + 
Sbjct: 607 ALIWHIWWMVILGGIGAFATFVVFAWRDHDEYIIPADEVAAIERVNLE 654


>gi|169633242|ref|YP_001706978.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           SDF]
 gi|169795508|ref|YP_001713301.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           AYE]
 gi|184158690|ref|YP_001847029.1| Heme/copper-type cytochrome/quinol oxidase subunit 1 [Acinetobacter
           baumannii ACICU]
 gi|213158552|ref|YP_002319850.1| cytochrome O ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AB0057]
 gi|215482995|ref|YP_002325200.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AB307-0294]
 gi|239501442|ref|ZP_04660752.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AB900]
 gi|260554570|ref|ZP_05826791.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           ATCC 19606 = CIP 70.34]
 gi|301345102|ref|ZP_07225843.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           AB056]
 gi|301510826|ref|ZP_07236063.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           AB058]
 gi|301595311|ref|ZP_07240319.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           AB059]
 gi|332850729|ref|ZP_08432976.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           6013150]
 gi|332866970|ref|ZP_08437287.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           6013113]
 gi|332873682|ref|ZP_08441625.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           6014059]
 gi|384131280|ref|YP_005513892.1| cyoB [Acinetobacter baumannii 1656-2]
 gi|384143767|ref|YP_005526477.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385238104|ref|YP_005799443.1| Heme/copper-type cytochrome/quinol oxidase subunit 1 [Acinetobacter
           baumannii TCDC-AB0715]
 gi|387123398|ref|YP_006289280.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           MDR-TJ]
 gi|403674059|ref|ZP_10936335.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. NCTC
           10304]
 gi|407933294|ref|YP_006848937.1| Heme/copper-type cytochrome/quinol oxidase subunit 1 [Acinetobacter
           baumannii TYTH-1]
 gi|416147781|ref|ZP_11602018.1| Heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Acinetobacter baumannii AB210]
 gi|417544151|ref|ZP_12195237.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC032]
 gi|417549781|ref|ZP_12200861.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-18]
 gi|417553355|ref|ZP_12204425.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-81]
 gi|417560282|ref|ZP_12211161.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC137]
 gi|417566427|ref|ZP_12217299.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC143]
 gi|417569406|ref|ZP_12220264.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC189]
 gi|417573308|ref|ZP_12224162.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Canada BC-5]
 gi|417578207|ref|ZP_12229044.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-17]
 gi|417869005|ref|ZP_12514000.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH1]
 gi|417873963|ref|ZP_12518825.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH2]
 gi|417879269|ref|ZP_12523844.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH3]
 gi|417881341|ref|ZP_12525665.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH4]
 gi|421198221|ref|ZP_15655388.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC109]
 gi|421202664|ref|ZP_15659811.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter baumannii
           AC12]
 gi|421457300|ref|ZP_15906637.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-123]
 gi|421536107|ref|ZP_15982358.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter baumannii
           AC30]
 gi|421622960|ref|ZP_16063852.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC074]
 gi|421626282|ref|ZP_16067111.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC098]
 gi|421629945|ref|ZP_16070660.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC180]
 gi|421633746|ref|ZP_16074375.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-13]
 gi|421644504|ref|ZP_16084986.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-235]
 gi|421648848|ref|ZP_16089247.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-251]
 gi|421651923|ref|ZP_16092290.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC0162]
 gi|421654135|ref|ZP_16094466.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-72]
 gi|421660023|ref|ZP_16100231.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-83]
 gi|421664376|ref|ZP_16104516.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC110]
 gi|421667638|ref|ZP_16107700.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC087]
 gi|421669275|ref|ZP_16109302.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC099]
 gi|421676149|ref|ZP_16116061.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC065]
 gi|421679605|ref|ZP_16119474.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC111]
 gi|421686440|ref|ZP_16126195.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-143]
 gi|421691736|ref|ZP_16131395.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-116]
 gi|421695116|ref|ZP_16134730.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-692]
 gi|421698912|ref|ZP_16138451.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-58]
 gi|421704194|ref|ZP_16143641.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ZWS1122]
 gi|421707843|ref|ZP_16147227.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ZWS1219]
 gi|421787314|ref|ZP_16223670.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-82]
 gi|421792804|ref|ZP_16228949.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-2]
 gi|421795350|ref|ZP_16231433.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-21]
 gi|421802272|ref|ZP_16238225.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Canada BC1]
 gi|421804157|ref|ZP_16240067.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-A-694]
 gi|421806741|ref|ZP_16242603.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC035]
 gi|424051807|ref|ZP_17789339.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Ab11111]
 gi|424059446|ref|ZP_17796937.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Ab33333]
 gi|424063354|ref|ZP_17800839.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Ab44444]
 gi|425749738|ref|ZP_18867705.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-348]
 gi|425751233|ref|ZP_18869181.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-113]
 gi|445405149|ref|ZP_21431126.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-57]
 gi|445444414|ref|ZP_21442982.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-A-92]
 gi|445459818|ref|ZP_21447727.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC047]
 gi|445467804|ref|ZP_21450770.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC338]
 gi|445483743|ref|ZP_21456513.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-78]
 gi|445492422|ref|ZP_21460369.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AA-014]
 gi|169148435|emb|CAM86301.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           AYE]
 gi|169152034|emb|CAP00914.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii]
 gi|183210284|gb|ACC57682.1| Heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Acinetobacter baumannii ACICU]
 gi|193077736|gb|ABO12594.2| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ATCC 17978]
 gi|213057712|gb|ACJ42614.1| cytochrome O ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AB0057]
 gi|213987012|gb|ACJ57311.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AB307-0294]
 gi|260411112|gb|EEX04409.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           ATCC 19606 = CIP 70.34]
 gi|322507500|gb|ADX02954.1| cyoB [Acinetobacter baumannii 1656-2]
 gi|323518604|gb|ADX92985.1| Heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Acinetobacter baumannii TCDC-AB0715]
 gi|332730566|gb|EGJ61882.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           6013150]
 gi|332734299|gb|EGJ65427.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           6013113]
 gi|332738070|gb|EGJ68954.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           6014059]
 gi|333365376|gb|EGK47390.1| Heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Acinetobacter baumannii AB210]
 gi|342229406|gb|EGT94274.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH3]
 gi|342230285|gb|EGT95126.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH2]
 gi|342231412|gb|EGT96221.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH1]
 gi|342239033|gb|EGU03450.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ABNIH4]
 gi|347594260|gb|AEP06981.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385877890|gb|AFI94985.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           MDR-TJ]
 gi|395522864|gb|EJG10953.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC137]
 gi|395552099|gb|EJG18107.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC143]
 gi|395553629|gb|EJG19635.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC189]
 gi|395566189|gb|EJG27834.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC109]
 gi|395568904|gb|EJG29574.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-17]
 gi|398327792|gb|EJN43923.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter baumannii
           AC12]
 gi|400207024|gb|EJO37995.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-123]
 gi|400208876|gb|EJO39846.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Canada BC-5]
 gi|400382039|gb|EJP40717.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC032]
 gi|400387749|gb|EJP50822.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-18]
 gi|400393614|gb|EJP60660.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-81]
 gi|404562345|gb|EKA67569.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-116]
 gi|404566684|gb|EKA71826.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-692]
 gi|404569042|gb|EKA74137.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-143]
 gi|404572231|gb|EKA77276.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-58]
 gi|404665363|gb|EKB33326.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Ab11111]
 gi|404670184|gb|EKB38076.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Ab33333]
 gi|404674531|gb|EKB42275.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Ab44444]
 gi|407190588|gb|EKE61804.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ZWS1122]
 gi|407191343|gb|EKE62545.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ZWS1219]
 gi|407901875|gb|AFU38706.1| Heme/copper-type cytochrome/quinol oxidase subunit 1 [Acinetobacter
           baumannii TYTH-1]
 gi|408505288|gb|EKK07013.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-235]
 gi|408507856|gb|EKK09550.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC0162]
 gi|408511985|gb|EKK13632.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-72]
 gi|408515017|gb|EKK16616.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           IS-251]
 gi|408694086|gb|EKL39674.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC074]
 gi|408695553|gb|EKL41108.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC098]
 gi|408699294|gb|EKL44774.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC180]
 gi|408706276|gb|EKL51600.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-13]
 gi|408706416|gb|EKL51734.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-83]
 gi|408712673|gb|EKL57856.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC110]
 gi|409985917|gb|EKO42119.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter baumannii
           AC30]
 gi|410380445|gb|EKP33031.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC065]
 gi|410383584|gb|EKP36112.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC087]
 gi|410389018|gb|EKP41440.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC099]
 gi|410390781|gb|EKP43161.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC111]
 gi|410398895|gb|EKP51098.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-2]
 gi|410401847|gb|EKP53982.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-21]
 gi|410404069|gb|EKP56142.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Canada BC1]
 gi|410407751|gb|EKP59728.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-82]
 gi|410411528|gb|EKP63397.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-A-694]
 gi|410417284|gb|EKP69054.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC035]
 gi|425487140|gb|EKU53498.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-348]
 gi|425500176|gb|EKU66201.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-113]
 gi|444761742|gb|ELW86124.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-A-92]
 gi|444763661|gb|ELW87997.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           AA-014]
 gi|444768311|gb|ELW92528.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-78]
 gi|444773053|gb|ELW97149.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC047]
 gi|444775983|gb|ELX00036.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           OIFC338]
 gi|444781899|gb|ELX05810.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           Naval-57]
 gi|452955967|gb|EME61361.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           MSP4-16]
          Length = 663

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|126642212|ref|YP_001085196.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter baumannii
           ATCC 17978]
          Length = 641

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 48  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 107

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 108 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 167

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 168 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 227

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 228 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 287

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 288 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 347

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 348 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 407

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 408 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 467

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +RH  +D TGDPW+ RTLEW+TSSP 
Sbjct: 468 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDARTLEWATSSPA 527

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 528 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 587

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 588 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 633


>gi|262279557|ref|ZP_06057342.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259908|gb|EEY78641.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter
           calcoaceticus RUH2202]
          Length = 663

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF+ITF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLITFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D+TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDLTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  I+GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITILGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVSAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|408822437|ref|ZP_11207327.1| ubiquinol oxidase polypeptide I [Pseudomonas geniculata N1]
          Length = 658

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/583 (61%), Positives = 445/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGVGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +GIGTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGIGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R   +D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK     P   +  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRGLPPPPKTYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAANL 650


>gi|424744264|ref|ZP_18172562.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-141]
 gi|422943003|gb|EKU38034.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-141]
          Length = 663

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/586 (62%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D+TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDLTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  I+GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITILGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVSAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|296115136|ref|ZP_06833777.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978237|gb|EFG84974.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 664

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/585 (59%), Positives = 445/585 (76%), Gaps = 4/585 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  + G++N +VP
Sbjct: 69  LFRGFADAIMMRTQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMQGLMNIVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N LSFWMT+   +LV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNTLSFWMTTISFLLVNVSLFIGEFSQCGWLAYPPLSEQQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+G+N  ATI+KMRAPGM  M MP+FTWT  CT +LI+ AFP+LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGVNFFATIVKMRAPGMDYMRMPVFTWTIFCTTVLIMVAFPILTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY+G HFFTND GGN M+Y+++IW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 AMGLLGLDRYLGMHFFTNDGGGNQMLYLSVIWGWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY +MVYAT  I +LS +VW+HHFFTMG+G NVNAFFGI TM+I++PTG KIFNWLF
Sbjct: 309 PLFGYKTMVYATASIMVLSLVVWVHHFFTMGAGPNVNAFFGIMTMVIAVPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GR+ F   + W IGFMITF IGGM GV+LA+PA++F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TMYKGRVEFHATMYWVIGFMITFSIGGMTGVMLAIPASDFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ +N+WFPKAFG+KL   WGK +FWFW +GFY AFMPLY+LGF G+TRRM+H+++
Sbjct: 429 YFGYVAAMNFWFPKAFGFKLNEAWGKRAFWFWFVGFYFAFMPLYVLGFDGMTRRMNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSSP 479
            +   W  IA FG +LIA+GI+  + QL VS R R+     D+TGDPWN RTLEWSTSSP
Sbjct: 489 PAWHPWLLIAEFGAVLIALGIVCQLTQLYVSIRDRNLAENRDMTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P++H+ D++ + K+   + +     +Q I MPKNT  G LI  FS I+GFA
Sbjct: 549 PPFYNFAVLPVVHELDAFAHDKEAGIDTRSAGADYQPIHMPKNTACGFLIGAFSFILGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            +W +W L  +  I  +  VI  + +   +YY+   E+  IE + 
Sbjct: 609 AIWWIWWLAAVGLIGVIATVIARSSDNDVDYYVPVSEVARIENEH 653


>gi|349686992|ref|ZP_08898134.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter
           oboediens 174Bp2]
          Length = 664

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/585 (60%), Positives = 443/585 (75%), Gaps = 4/585 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  + G++N +VP
Sbjct: 69  LFRGFADAIMMRSQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMQGLMNIVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N LSFWMT+   +LV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNTLSFWMTTISFLLVNVSLFIGEFSQCGWLAYPPLSEQQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+G+N  ATI+KMRAPGM  M MP+FTWT  CT +LI+ AFP+LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGVNFFATIVKMRAPGMTYMRMPVFTWTIFCTTVLIMVAFPILTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY+G HFFTND GGN M+Y+++IW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 AMGLLGLDRYLGMHFFTNDGGGNQMLYLSVIWGWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY +MVYAT  I +LS +VW+HHFFTMG+G NVNAFFGI TMII++PTG KIFNWLF
Sbjct: 309 PLFGYKTMVYATASIMVLSLVVWVHHFFTMGAGPNVNAFFGIMTMIIAVPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI F   + W IGFMITF IGGM GV+LA+PA++F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TMYKGRIDFHATMYWVIGFMITFSIGGMTGVMLAIPASDFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ +N+WFPKAFG+KL   WGK +FWFW +GFYVAFMPLY+LGF G+TRRM+H+++
Sbjct: 429 YFGYVAAMNFWFPKAFGFKLNEAWGKRAFWFWFVGFYVAFMPLYVLGFEGMTRRMNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSSP 479
                W  IA  G +LIA GI+  + QL VS R R+     D+TGDPWN RTLEWSTSSP
Sbjct: 489 PEWHPWLLIAEVGAVLIACGIVCQLTQLYVSIRDRNLAENRDLTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+   + +     +Q I MPKNT  G LI  FS +MGF 
Sbjct: 549 PPFYNFAILPEVHELDAFAHDKEAGIDTRQAGGNYQPIHMPKNTACGFLIGAFSFVMGFG 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VW++W L  +  I  +  VI  + +   +YY+   E+  IE++ 
Sbjct: 609 AVWYIWWLAAVGLIGVIATVIARSSDNDVDYYVPVSEVVRIEQEH 653


>gi|384220732|ref|YP_005611898.1| oxidase [Bradyrhizobium japonicum USDA 6]
 gi|354959631|dbj|BAL12310.1| oxidase [Bradyrhizobium japonicum USDA 6]
          Length = 666

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/583 (59%), Positives = 454/583 (77%), Gaps = 5/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLS ++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVIGEFARTGWLAFPPLSELSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVAGINLVTTVLKLRTKGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII+IPTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPDVNAIFGIASMIIAIPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF  P+LW +GFM+TF+IGG+ GV++AVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRIRFATPMLWAVGFMVTFIIGGLTGVLVAVPPADFMLHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L+  WGK  FWF  +GFYV F+PLYI G +G+TRR+ H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLDERWGKAGFWFTFLGFYVTFIPLYIAGMLGMTRRLQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             + + W  +AA G  ++++G++  I+QL+VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAAWRPWMFVAAAGMAVLSIGVICQIVQLVVSIRNREALRDRTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWW----YMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFAF P +   D++W    + K+   K  + ++QDI MP+N+  G + + F+ IMGF
Sbjct: 547 PVFNFAFHPDVRGEDAYWDQKAHAKQQQLKHDRPEYQDIEMPRNSPTGFVCAFFATIMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           AL+WH+W + I+  +      +   +     Y I ++E+  I+
Sbjct: 607 ALIWHIWWMVILGGVGAFATFVVFAWRDHDEYVIPADEVARID 649


>gi|375135273|ref|YP_004995923.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter
           calcoaceticus PHEA-2]
 gi|325122718|gb|ADY82241.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 663

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/586 (61%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D+TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDLTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|186472487|ref|YP_001859829.1| cytochrome o ubiquinol oxidase subunit I [Burkholderia phymatum
           STM815]
 gi|184194819|gb|ACC72783.1| cytochrome o ubiquinol oxidase, subunit I [Burkholderia phymatum
           STM815]
          Length = 670

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/584 (62%), Positives = 452/584 (77%), Gaps = 3/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMRLQ A++ G + GYLPP HY+QIFTAHGVIMIFF+AM L+ G+ N +V
Sbjct: 68  MLLRGFADAVMMRLQLALASGGATGYLPPHHYDQIFTAHGVIMIFFMAMALMVGLFNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWMT+  AIL+ ISL IGEFA  GWL YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWMTAISAILMNISLVIGEFAQVGWLAYPPLSELQFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+++G+GTL++ IN   TIIKMRAPGM LM MP+FTWTALC+N+LI+A FP+LT
Sbjct: 188 DYYIWALELSGVGTLITAINFFVTIIKMRAPGMSLMKMPVFTWTALCSNVLIMATFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY   HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV+STF+ 
Sbjct: 248 IALALLGLDRYADMHFFTNDAGGNAMLYLNLIWAWGHPEVYILVLPAFGIYSEVISTFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYA+  I +L+++VW HHFFTMGSGA+VNAFFGI TMII+IPTG KIFNWL
Sbjct: 308 KPLFGYKTMVYASCAIMVLAFLVWAHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+LWTIGFM+TF IGGM GV+LA+P A+F+LHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYRGRLEFTAPVLWTIGFMVTFTIGGMTGVMLAIPGADFVLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G++YWFPK FG+KL    GK +FWFW +GF+VAF PLY+LGFMG TRR++H++
Sbjct: 428 VVFGYLAGVSYWFPKVFGFKLNDRLGKAAFWFWFVGFFVAFTPLYVLGFMGATRRLNHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           + + Q    IAA G  LIA+G++  + Q +VS   R +    D+TGDPW GRTLEWS SS
Sbjct: 488 NPAWQPLMIIAACGAALIAIGVVCQVTQFVVSIINRNKPEYRDVTGDPWGGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNFA IP++ + D++ +MK+       +  ++DI MP NT+ G  I +FSL  GFA
Sbjct: 548 PPPVYNFATIPVVEELDAFAHMKETGKGLGIQAAYRDIHMPSNTSAGFFIGVFSLAFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWH+W L I++       VI  +F     YYI S+ +  IE K
Sbjct: 608 AVWHIWWLAIVALAAIAATVIGRSFGRDDGYYIPSDVVRTIENK 651


>gi|427425386|ref|ZP_18915482.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-136]
 gi|425697877|gb|EKU67537.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-136]
          Length = 663

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/586 (61%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D+TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKENMDLTGDPWDARTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|336233388|ref|YP_004590134.1| cytochrome o ubiquinol oxidase subunit I [Buchnera aphidicola
           (Cinara tujafilina)]
 gi|335345329|gb|AEH39875.1| cytochrome o ubiquinol oxidase subunit I [Buchnera aphidicola
           (Cinara tujafilina)]
          Length = 660

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/586 (62%), Positives = 451/586 (76%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQQ +      G  P  HY+Q+FTAHGVIMIFFVAMPLV G++N+IV
Sbjct: 68  MLIRGFIDAIMMRLQQVLVSCGYLGLFPSHHYDQVFTAHGVIMIFFVAMPLVIGLMNYIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD AFP LN++SFW+T+G  IL+ +SL +GEFA TGWLGYPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDFAFPILNSISFWLTAGSVILMTLSLGLGEFAKTGWLGYPPLSGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW LQI+GIG  L+ IN + TI+KMRAPGM +  +P+FTWTALCTN+LI+ +FPVL 
Sbjct: 188 DYWIWILQISGIGATLTAINFLVTILKMRAPGMTMFKLPVFTWTALCTNVLILISFPVLL 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DRY+G HFFTN++GGN+MMY+NLIWIWGHPEVYILVLPVFGIFSE+V+TFS 
Sbjct: 248 VTLMLLTFDRYVGFHFFTNNMGGNMMMYINLIWIWGHPEVYILVLPVFGIFSEIVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY S+++AT+VIT+LS+IVWLHHFFTMGSG +VN+FF ITTMII+IPTG KIFNWL
Sbjct: 308 KTLFGYVSLIWATIVITVLSFIVWLHHFFTMGSGPHVNSFFSITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIR  + +LWTIGF+ITF IGGMAGV+L++P  +F+ HNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYGGRIRLHLSMLWTIGFLITFSIGGMAGVLLSIPPIDFVFHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPK FG+KL   WG  SFW WLIGF++AFMPLYILG +G+TRR+    
Sbjct: 428 VVFGCFAGITYWFPKIFGFKLNEKWGIYSFWLWLIGFFIAFMPLYILGMLGMTRRLGQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSS 478
           D        IAA G  +I +GILS +IQL +S + R  +  ID TGDPWNGRTLEWS SS
Sbjct: 488 DYKFHNLLIIAAIGVFIIFLGILSQVIQLYLSIKNRRKIDYIDYTGDPWNGRTLEWSISS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWY-MKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPPVYNF+ +PL+ + DS+W      + K     ++DI MP N+N+GILI  F ++ GF+
Sbjct: 548 PPPVYNFSVLPLVTERDSFWQDKNLKSKKNNNIIYEDIHMPCNSNLGILIGFFCILFGFS 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           +VWH+W L+I S     ++ I +     + Y IS   I   EKK I
Sbjct: 608 MVWHIWYLSIFSVFFIFLLFIKHNCTVNKGYIISKSTIEAEEKKFI 653


>gi|386720320|ref|YP_006186646.1| cytochrome O ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia D457]
 gi|384079882|emb|CCH14485.1| Cytochrome O ubiquinol oxidase subunit I [Stenotrophomonas
           maltophilia D457]
          Length = 658

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/583 (61%), Positives = 445/583 (76%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A +   S G+LPPEHY+QIFTAHGVIMIFFVA P V G++N IV
Sbjct: 68  MLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQIFTAHGVIMIFFVATPFVVGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN  SFW+   GA L+MISL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDMAFPFLNAFSFWIFVVGAALMMISLGVGEFAMTGWVAYPPLSGIEFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ +GIGTLL+G+N+  TI++MRAPGM LM MP+FTWT L T+++I+AAFP+LT
Sbjct: 188 DYYIWALQASGIGTLLTGVNLFITILRMRAPGMTLMKMPVFTWTVLVTSVIIIAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L   TLDRY+  +F+TN LGGN MMYVNL+W WGHPEVYILVLP FGIFSEV +TF+ 
Sbjct: 248 VALGALTLDRYLDFNFYTNTLGGNPMMYVNLVWAWGHPEVYILVLPAFGIFSEVTATFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV AT+ I +LS+IVWLHHFFTMGSGA+VNAFFGI TMII+IPTG KIF WL
Sbjct: 308 KKLFGYKSMVGATLAIGILSFIVWLHHFFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+ F VP+LWTI F++TF IGGM GV+LA+P A+FLLHNSLFLVAHFHN IIGG
Sbjct: 368 FTMYGGRVEFSVPMLWTIAFLVTFTIGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G  YWFPK FG+ L    GK SF  W+IGFY+AFMPLY+LGFMG+TRRM+ ++
Sbjct: 428 ALFGYLAGFAYWFPKVFGFTLNERLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +   A  G L +  GI+  ++Q+ VS R R    D+TGDPWN RTLEW+T SPP
Sbjct: 488 NPAWTPYLIAAFIGALFVFAGIILMLVQIYVSVRDRKRNRDLTGDPWNARTLEWATPSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFA +P   + D++   KK +   P   +  I MPKNT + ++++I+ L++ FALVW
Sbjct: 548 PFYNFAVVPKADELDAFHEAKKRSLPPPPKTYAPIHMPKNTGVPLILNIWILVLCFALVW 607

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           H+W +   SFI  ++ +I  +++   +YY+SSEE+   E   +
Sbjct: 608 HIWWMAAASFIAMIVTLIVRSYDEDVDYYVSSEEVARTEAANL 650


>gi|110635863|ref|YP_676071.1| cytochrome c oxidase subunit I [Chelativorans sp. BNC1]
 gi|110286847|gb|ABG64906.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Chelativorans
           sp. BNC1]
          Length = 676

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/583 (60%), Positives = 449/583 (77%), Gaps = 2/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA +  S  GYLPP+H++QIF++HG IMIFF+AMP +TG++N +V
Sbjct: 68  MLLRGFIDALMMRAQQAFALNSD-GYLPPDHFDQIFSSHGTIMIFFMAMPFMTGLVNIVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN++SFW+TS GA LVMISL IG F++ GW GYPP SGIA SP VGV
Sbjct: 127 PQQIGARDVAFPFLNSVSFWLTSAGAGLVMISLVIGTFSTAGWTGYPPYSGIAYSPDVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+L I+G+G+ L+GIN + TI+K RAPGMKLM MP+FTWTALC++IL++ AFP LT
Sbjct: 187 DYWIWALLISGVGSTLTGINFVVTILKRRAPGMKLMRMPLFTWTALCSSILMIFAFPALT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            V  +  LDR +G HFFTN+ GGN+M Y+NL WIWGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 247 VVCSMLALDRLLGMHFFTNEAGGNMMNYINLFWIWGHPEVYILILPAFGVFSEVVATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+VYAT  I LLS+ VWLHHFFTMGS A+VNAFFG+ TMII++PTG K+F+WL
Sbjct: 307 KRLFGYRSLVYATAAIALLSFTVWLHHFFTMGSSASVNAFFGVATMIIAVPTGVKVFDWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+LWT+GF++TFVIGGM GV+LA+P A++L+HN+ FLVAHFHN++I G
Sbjct: 367 FTMYRGRIEFTPPMLWTVGFIVTFVIGGMTGVLLALPPADYLMHNTTFLVAHFHNMLIPG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G  YWFPKAFG+ L+  WG  SFW WL+GFY+AFMPLY LGFMG+ RRM H+ 
Sbjct: 427 VLFGFLAGYMYWFPKAFGFTLDERWGARSFWCWLVGFYLAFMPLYALGFMGMPRRMEHYN 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q    +AA G ++I +GI+  I+QLIVS R+RH   ++TGDPWNGRTLEW TSSPP
Sbjct: 487 APEWQPLLIVAALGAMVILLGIVCLIVQLIVSIRRRHETRELTGDPWNGRTLEWLTSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P   + D++  M+K    + + K + DI MPKNT +GIL+     ++GF +V
Sbjct: 547 APYNFAVLPRADEIDAFHEMRKRGVAYKRPKHYADIEMPKNTAVGILLGGLGFVLGFGVV 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L + S +     +I   FN    + IS+ E+  IE  R
Sbjct: 607 WHIWWLALASLLGVAAALIARAFNDDTEFRISAAEVEEIENAR 649


>gi|374574040|ref|ZP_09647136.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM471]
 gi|374422361|gb|EHR01894.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp.
           WSM471]
          Length = 666

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/588 (58%), Positives = 456/588 (77%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLS ++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVIGEFARTGWLAFPPLSELSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVAGINLVTTVLKLRTKGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G +VNA FGI +MII+IPTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPDVNAIFGIASMIIAIPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRFE P+LW+IGFM+TF+IGG+ GV++AVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRIRFETPMLWSIGFMVTFIIGGLTGVLVAVPPADFVLHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L+  WGK +FWF  +GFYV F+PLY+ G +G+TRRM H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLDDRWGKLAFWFTFLGFYVTFIPLYVAGMLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             + + W  +AA G  ++ +G++  I+Q++VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAAWRPWMLVAAVGMAVLTIGVICQIMQIVVSIRNREALRDRTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMK----KNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+NFAF P +   D++W +K    + +      ++ DI MP+N+  G + + F+ +MGF
Sbjct: 547 PVFNFAFNPDVRGEDAYWDIKTRGQQQSLDHDAPEYHDIEMPRNSPTGFVCAFFATVMGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           AL+WH+W + I+  I      +   +     Y I ++E+  I++  + 
Sbjct: 607 ALIWHIWWMVILGGIGAFATFVVFAWRDHDEYVIPADEVAAIDRVNLE 654


>gi|293609456|ref|ZP_06691758.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827908|gb|EFF86271.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 661

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/586 (61%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 68  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 188 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 248 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 308 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI Y++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 428 VVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D+TGDPW+ RTLEW+TSSP 
Sbjct: 488 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDLTGDPWDARTLEWATSSPA 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 548 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 608 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 653


>gi|402756326|ref|ZP_10858582.1| cytochrome o ubiquinol oxidase subunit I [Acinetobacter sp. NCTC
           7422]
          Length = 663

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/586 (61%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D TGDPW+ RTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDHTGDPWDSRTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHVPEASGVDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVSAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|425746277|ref|ZP_18864307.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-323]
 gi|425486154|gb|EKU52526.1| cytochrome o ubiquinol oxidase, subunit I [Acinetobacter baumannii
           WC-323]
          Length = 663

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/586 (61%), Positives = 470/586 (80%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMRLQ  ++ G   GYL P+HY+QIFTAHGVIMIFFVAM LV G++N  V
Sbjct: 70  MLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISV 129

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN+LSFW+ +G A L+M+SL +GEFA+TGW+ YPPLSGI  SPGVGV
Sbjct: 130 PLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGV 189

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLLSG+N   TIIKMRAPGMKLM+MPIFTWT+LCT +LI+A+FPVLT
Sbjct: 190 DYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLT 249

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDRY G HFFTN+LGG+ M+YVNLIW WGHPEVYILVLP FG++SE+V+TFS 
Sbjct: 250 GTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSR 309

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYAT+ IT+L+++VWLHHFFTMG+GANVNAFFGI TM+I+IPTG KIF+WL
Sbjct: 310 KALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWL 369

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P+LWT+GF++TF IGG+ GV++AVP A+FL+HNSLFL+AHFHNVIIGG
Sbjct: 370 FTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGG 429

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +GI +++PK FG+KL   WGK +FWFW  GFY AFMPLYILGFMG+TRR++ ++
Sbjct: 430 VVFGMFAGIIFYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYD 489

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FG +L+A+GI  F++Q+IV + +R   +D TGDPW+GRTLEW+TSSP 
Sbjct: 490 NPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRKDNMDHTGDPWDGRTLEWATSSPA 549

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA  P     D +W  K+N   + ++ K++DI MP +   G +I++F  ++GFAL+
Sbjct: 550 PFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALI 609

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L ++SF+  ++ +I ++F    +YY+ + E+  IE +R  L
Sbjct: 610 WHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYAL 655


>gi|349699949|ref|ZP_08901578.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter
           europaeus LMG 18494]
          Length = 664

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/585 (59%), Positives = 442/585 (75%), Gaps = 4/585 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  + G++N +VP
Sbjct: 69  LFRGFADAIMMRSQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMQGLMNIVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N LSFWMT+   +LV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNTLSFWMTTISFLLVNVSLFIGEFSQCGWLAYPPLSEQQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+G+N  ATI+KMRAPGM  M MP+FTWT  CT +LI+ AFP+LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGVNFFATIVKMRAPGMTYMRMPVFTWTIFCTTVLIMVAFPILTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY+G HFFTND GGN M+Y+++IW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 AMGLLGLDRYLGMHFFTNDGGGNQMLYLSVIWGWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY +MVYAT  I +LS +VW+HHFFTMG+G NVNAFFGI TM+I++PTG KIFNWLF
Sbjct: 309 PLFGYKTMVYATASIMVLSLVVWVHHFFTMGAGPNVNAFFGIMTMVIAVPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI F   + W IGFMITF IGGM GV+LA+PA++F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TMYKGRIEFHATMYWVIGFMITFSIGGMTGVMLAIPASDFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ +N+WFPKAFG+KL   WGK +FW W IGFYVAFMPLY+LGF G+TRRM+H+++
Sbjct: 429 YFGYVAAMNFWFPKAFGFKLNEAWGKRAFWCWFIGFYVAFMPLYVLGFEGMTRRMNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSSP 479
                W  IA  G +LIA GI+  + QL VS R R+     D+TGDPWN RTLEWSTSSP
Sbjct: 489 PEWHPWLLIAEVGAVLIACGIVCQLTQLYVSIRDRNLAENRDLTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+   + +     +Q I MPKNT  G LI  FS ++GF 
Sbjct: 549 PPFYNFAILPEVHELDAFAHDKEAGIDTRQAGGNYQPIHMPKNTACGFLIGAFSFVLGFG 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            VW++W L  +  I  +  VI  + +   +YY+   E+  IE++ 
Sbjct: 609 AVWYIWWLAAVGLIGVIATVIARSSDNDVDYYVPVSEVVRIEQEH 653


>gi|410088998|ref|ZP_11285628.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas viridiflava
           UASWS0038]
 gi|409763775|gb|EKN48727.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas viridiflava
           UASWS0038]
          Length = 670

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/586 (58%), Positives = 446/586 (76%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKL++MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLLDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+  M++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKFMIFASGAICVLGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIA GI S +IQL VS R R    D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIACGIASQLIQLFVSIRDRAKNPDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D++   K+    +    K+  I MP NT  G+ + +   + GFA +
Sbjct: 548 PFYNFAELPKADDIDAFTDAKRAGTAYSVPAKYSAIHMPNNTPTGLYMGLLLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L   S + T+ + + +     + Y + +EE+  IE +  ++
Sbjct: 608 WHIWWLVGASLVATIAVFVAHAARDDQGYMVPAEEVARIEGEHHKV 653


>gi|213021564|ref|ZP_03336011.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 536

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/530 (66%), Positives = 435/530 (82%), Gaps = 1/530 (0%)

Query: 5   GFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVPLQI 64
           GF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +VPLQI
Sbjct: 1   GFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQI 60

Query: 65  GARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYI 124
           GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGVDY+I
Sbjct: 61  GARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWI 120

Query: 125 WSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLF 184
           W+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + 
Sbjct: 121 WALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVA 180

Query: 185 LSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLF 244
           L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLF
Sbjct: 181 LLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLF 240

Query: 245 GYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMY 304
           GY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY
Sbjct: 241 GYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMY 300

Query: 305 RGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFG 364
           +GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG
Sbjct: 301 QGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFG 360

Query: 365 LMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISL 424
             +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D   
Sbjct: 361 CFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQF 420

Query: 425 QIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYN 484
                +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPPP YN
Sbjct: 421 HTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYN 480

Query: 485 FAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLI 533
           FA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ +
Sbjct: 481 FAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATV 530


>gi|254500707|ref|ZP_05112858.1| cytochrome o ubiquinol oxidase, subunit I [Labrenzia alexandrii
           DFL-11]
 gi|222436778|gb|EEE43457.1| cytochrome o ubiquinol oxidase, subunit I [Labrenzia alexandrii
           DFL-11]
          Length = 680

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/582 (59%), Positives = 445/582 (76%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQAIS  S  GYLPPEH+ QIF++HG IMIFFVAMP +TG+IN IV
Sbjct: 68  MLVRGFVDALMMRAQQAISLNSE-GYLPPEHFEQIFSSHGTIMIFFVAMPFLTGLINLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDV+FPFLN++S W+T+ GA LV+ISL +G+F+  GW GYPP SGI  SPGVGV
Sbjct: 127 PQQIGARDVSFPFLNSVSLWLTAAGAALVLISLVVGKFSQAGWTGYPPYSGIEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+L ++G+GT +SGIN I TI+K R PGM  M MP+FTWTALC +ILIV AFP LT
Sbjct: 187 DYWIWALTLSGVGTTMSGINFIVTIVKNRCPGMTYMRMPMFTWTALCISILIVFAFPALT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            V     LDR +G HFFTN  GGN+MM+ NL+WIWGHPEVYIL+LP FGIFSEVV+TFS 
Sbjct: 247 VVALQLWLDRTLGFHFFTNGDGGNMMMFANLLWIWGHPEVYILILPAFGIFSEVVATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+VYAT  I LLS+ VWLHHFFTMG+ ANVNA FGI TMII++PTG KIF+W+
Sbjct: 307 KRLFGYTSLVYATACIALLSFTVWLHHFFTMGASANVNAIFGIATMIIAVPTGVKIFDWM 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F   +++TIGFM+TFVIGG+ GV+LA+P A++L+HNS FLVAHFHN++I G
Sbjct: 367 FTMYRGRIEFHPAMVFTIGFMVTFVIGGVTGVLLALPPADYLMHNSTFLVAHFHNMLIPG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G+NYWFPKAFG+KL+  WG  SFWFW IGFY+AFMPLY LGFMG++RRM H+ 
Sbjct: 427 ALFGYFAGLNYWFPKAFGFKLDAKWGIRSFWFWFIGFYLAFMPLYALGFMGMSRRMEHYA 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S Q +  +AA G + +  GI+   IQL VS R+  +  DITGDPWNGRTLEW+TSSP 
Sbjct: 487 DPSWQPFLVVAALGAVFVLCGIICIGIQLYVSVRQWGSSRDITGDPWNGRTLEWATSSPA 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++  MK     + + ++++ I+MPK+T +G+++   S +MGFA V
Sbjct: 547 APYNFAVVPTVTDIDAFHEMKMRGTAYQRPERYEPIVMPKSTGLGVILGGLSFVMGFAAV 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           W++W L ++  ++ L+ +     +    Y +S+ ++  IE K
Sbjct: 607 WYIWWLAVLMLVLCLVCIGIRACDDNSEYVLSAADVEAIENK 648


>gi|212212542|ref|YP_002303478.1| cytochrome O ubiquinol oxidase subunit I [Coxiella burnetii
           CbuG_Q212]
 gi|212010952|gb|ACJ18333.1| cytochrome O ubiquinol oxidase subunit I [Coxiella burnetii
           CbuG_Q212]
          Length = 668

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/590 (60%), Positives = 449/590 (76%), Gaps = 8/590 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+D ++MR QQAI+ G++ GYLP +HY+QIFTAHGVIMIFFVAMPLV G+ N  +
Sbjct: 73  MLLRGFSDVILMRSQQAIAAGANMGYLPAQHYDQIFTAHGVIMIFFVAMPLVFGLANIAL 132

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+P+LN+ SFWMT  GA+L  +SL IG+FA+TGWL YPPLS +  SP VGV
Sbjct: 133 PLQIGARDVAYPYLNSFSFWMTFVGAMLCNVSLVIGDFAATGWLAYPPLSELYYSPTVGV 192

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQIAG+G+LL GIN IAT++KMR PGM  M MPIF WT  C+ ILI  AFP+LT
Sbjct: 193 DYFIWALQIAGVGSLLGGINFIATVVKMRCPGMTFMRMPIFVWTTFCSMILIALAFPILT 252

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDR +G HFFT   GGN+MMY+NLIW WGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 253 VSLALLTLDRLLGMHFFTQYAGGNMMMYINLIWAWGHPEVYILILPAFGVFSEVVATFSQ 312

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY +MVYAT  IT LS+IVWLHHFFTMGSG +VNAFFGI TMII++PTG KIFNWL
Sbjct: 313 KKLFGYVTMVYATFAITFLSFIVWLHHFFTMGSGGDVNAFFGIATMIIAVPTGVKIFNWL 372

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I    P+LW   F ITF IGG+ GV++A+P  +F +HNSLFLVAHFHNVIIGG
Sbjct: 373 FTMYKGKIIMRTPMLWVFAFFITFTIGGVTGVLMAIPPIDFQVHNSLFLVAHFHNVIIGG 432

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YWFPKAFG++L+   G+ SF FW+ GFY+AFMPLY+LG MGV RR++H+ 
Sbjct: 433 VLFGFFAGLIYWFPKAFGFQLDERLGQWSFLFWVAGFYMAFMPLYLLGLMGVMRRLNHYA 492

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D++LQ +F +AA G  LI +GIL  I Q+IVS + R  L D TGD WNGRT EWS +SP 
Sbjct: 493 DVTLQPYFIVAAIGAALIMIGILLQIAQIIVSIKNRDKLRDKTGDIWNGRTFEWSVASPA 552

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD--------KFQDILMPKNTNIGILISIFSL 532
           P YNFAFIP + + D +W  KK      +         +++DI MP+NT+ G +I++F+ 
Sbjct: 553 PFYNFAFIPKVEERDQYWEDKKKAKMEGRPLRVNPEHIQYKDIHMPRNTSAGFVIAMFAG 612

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + GFA+VWHMW+  II  +  ++ VI  TF+   +YY+ +E +  IE + 
Sbjct: 613 VFGFAVVWHMWIPAIIGIVGVIVTVIARTFSKDIDYYVKAETVKQIELQH 662


>gi|422643860|ref|ZP_16706999.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330957413|gb|EGH57673.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 670

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 451/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R +  D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDSNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    ++ P  ++  I MP NT  G+ + +   + GFA 
Sbjct: 548 PFYNFAELPKADDVDPFTDAKRAGTAYQVPA-RYTSIHMPNNTPTGLYMGLLLTVFGFAF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L   S + T+ + + +     + Y + +EE+  IE +  ++
Sbjct: 607 IWHIWWLVGASLVATIAVFVAHAVRDDQGYMVPAEEVARIEGEHHKV 653


>gi|424798404|ref|ZP_18223946.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter sakazakii
           696]
 gi|429107658|ref|ZP_19169527.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter malonaticus
           681]
 gi|429114380|ref|ZP_19175298.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter sakazakii
           701]
 gi|423234125|emb|CCK05816.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter sakazakii
           696]
 gi|426294381|emb|CCJ95640.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter malonaticus
           681]
 gi|426317509|emb|CCK01411.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter sakazakii
           701]
          Length = 554

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/543 (64%), Positives = 429/543 (79%), Gaps = 1/543 (0%)

Query: 43  MIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTG 102
           MIFFVAMP V G++N +VPLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TG
Sbjct: 1   MIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTG 60

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           W+ YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FT
Sbjct: 61  WVAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFT 120

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           W +LCTN+LI+ +FP+LT  + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYI
Sbjct: 121 WASLCTNVLIIVSFPILTVTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYI 180

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           LVLPVFG+FSE+ STFS KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFG
Sbjct: 181 LVLPVFGVFSEITSTFSKKRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFG 240

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           ITTMII+IPTG KIFNWLFTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+
Sbjct: 241 ITTMIIAIPTGVKIFNWLFTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFV 300

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHNVIIGGV+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FM
Sbjct: 301 LHNSLFLIAHFHNVIIGGVVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFM 360

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDI 462
           PLY +GFMG+TRR+S   D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+
Sbjct: 361 PLYAMGFMGMTRRVSQNIDPMFQPLMIVAEIGALLIACGILCIILQIYVSIRDRHLNRDL 420

Query: 463 TGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNT 521
           TGDPW GRTLEW+TSSPPP YNFA +P IH+ D++W MK     + +   +++I MPKN+
Sbjct: 421 TGDPWGGRTLEWATSSPPPFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPKNS 480

Query: 522 NIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
             GI I  FS I GFA++WH+W L I+ F   +I  I  +F+   +YY+    +  +E +
Sbjct: 481 AAGIFIGAFSTIFGFAMIWHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQ 540

Query: 582 RIR 584
              
Sbjct: 541 HFE 543


>gi|377811643|ref|YP_005044083.1| cytochrome-c oxidase [Burkholderia sp. YI23]
 gi|357941004|gb|AET94560.1| cytochrome-c oxidase [Burkholderia sp. YI23]
          Length = 669

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/584 (60%), Positives = 449/584 (76%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQAI+  S  GYLPP HY+QIFTAHG IMIFF+AM L+    N +V
Sbjct: 68  MLVRGFADAVMMRIQQAIALDSP-GYLPPHHYDQIFTAHGTIMIFFMAMALLVAFFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SLFIGEF+ TGWL YPPLS    SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAISAILINLSLFIGEFSKTGWLAYPPLSETQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+L+++GIGTLL+ +N   TI+KMRAPGM  M MP+FTWTA C+N+LI+A FP+LT
Sbjct: 187 DYYIWALELSGIGTLLTAVNFFVTIVKMRAPGMTWMKMPVFTWTAFCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEVV+TFS 
Sbjct: 247 VALALLALDRYMGMHFFTNDGGGNPMVYLNLIWAWGHPEVYILVLPAFGIYSEVVATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MV+AT  I +LS++VWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNW+
Sbjct: 307 KPLFGYKTMVWATCCIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIISIPTGVKIFNWI 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+     +LWTIGF++TF +GGM GV+LA+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRVELTSQVLWTIGFIVTFTLGGMTGVMLAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G++YW+PK FG+KL+   GK +FW W +GF+VAF+P+YILGFMG TRR++H++
Sbjct: 427 VVFGYFAGVSYWWPKVFGFKLDDKLGKKAFWCWFVGFFVAFVPIYILGFMGATRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRHTLIDITGDPWNGRTLEWSTSS 478
           + + Q +F +AA G  +IA+G++  ++Q++VS   R +    D+TGDPWNGRTLEW+ SS
Sbjct: 487 NPAWQPYFTVAAIGVGIIAVGVVFQVLQIVVSVIRRNQPAYRDLTGDPWNGRTLEWTMSS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPPVYNFA +P + + D +   K++  +     ++DI MP NT+ G++I +F+L  GFA 
Sbjct: 547 PPPVYNFANLPAVRELDDFADAKEHG-RIDTRPYRDIHMPSNTSAGLVIGLFALAFGFAA 605

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +WH+W L     I     VI  +F     + I +  +   E++ 
Sbjct: 606 IWHIWWLAAAGLIGVAATVIGYSFRENAGFIIPAATVKSTEERN 649


>gi|312962955|ref|ZP_07777441.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           WH6]
 gi|311282724|gb|EFQ61319.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           WH6]
          Length = 672

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/583 (59%), Positives = 448/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINVSLGVGEFAKTGWVAYPPLSGIQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R   +  +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRKQNMCESGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K++   + + K ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKEDGTAYQQPKHYEPIHMPSNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+S + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIVSLVGTIGYFIVHAARDDQGYMVPVETIERIEAEQ 650


>gi|237799925|ref|ZP_04588386.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022780|gb|EGI02837.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 670

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/587 (58%), Positives = 452/587 (77%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+KL   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFKLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R +  D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDSNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P     D +   K+    ++ P  ++  I MP NT  G+ + +   + GF  
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYQVPA-RYSAIHMPNNTATGLYMGMLLTVFGFGF 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W L  +S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 607 IWHIWWLVGVSLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|422587235|ref|ZP_16661906.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|422650033|ref|ZP_16712840.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330873015|gb|EGH07164.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|330963123|gb|EGH63383.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 670

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/586 (58%), Positives = 450/586 (76%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R +  D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDSNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K+    +    ++  I MP NT  G+ + +   + GFA +
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYNVPARYSAIHMPNNTATGLYMGMLLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 608 WHIWWLVGVSLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|29654349|ref|NP_820041.1| cytochrome c oxidase polypeptide I [Coxiella burnetii RSA 493]
 gi|153206792|ref|ZP_01945633.1| cytochrome o ubiquinol oxidase, subunit I [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154707670|ref|YP_001424381.1| cytochrome c oxidase polypeptide I [Coxiella burnetii Dugway
           5J108-111]
 gi|161830575|ref|YP_001596689.1| cytochrome o ubiquinol oxidase subunit I [Coxiella burnetii RSA
           331]
 gi|165924172|ref|ZP_02220004.1| cytochrome o ubiquinol oxidase, subunit I [Coxiella burnetii Q321]
 gi|212218405|ref|YP_002305192.1| cytochrome O ubiquinol oxidase subunit I [Coxiella burnetii
           CbuK_Q154]
 gi|29541616|gb|AAO90555.1| cytochrome c oxidase polypeptide I [Coxiella burnetii RSA 493]
 gi|120577155|gb|EAX33779.1| cytochrome o ubiquinol oxidase, subunit I [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154356956|gb|ABS78418.1| cytochrome c oxidase polypeptide I [Coxiella burnetii Dugway
           5J108-111]
 gi|161762442|gb|ABX78084.1| cytochrome o ubiquinol oxidase, subunit I [Coxiella burnetii RSA
           331]
 gi|165916376|gb|EDR34980.1| cytochrome o ubiquinol oxidase, subunit I [Coxiella burnetii Q321]
 gi|212012667|gb|ACJ20047.1| cytochrome O ubiquinol oxidase subunit I [Coxiella burnetii
           CbuK_Q154]
          Length = 668

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/590 (60%), Positives = 448/590 (75%), Gaps = 8/590 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+D ++MR QQAI+ G++ GYLP +HY+QIFTAHGVIMIFFVAMPLV G+ N  +
Sbjct: 73  MLLRGFSDVILMRSQQAIAAGANMGYLPAQHYDQIFTAHGVIMIFFVAMPLVFGLANIAL 132

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+P+LN+ SFWMT  GA+L  +SL IG+FA+TGWL YPPLS +  SP VGV
Sbjct: 133 PLQIGARDVAYPYLNSFSFWMTFVGAMLCNVSLVIGDFAATGWLAYPPLSELYYSPTVGV 192

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQIAG+G+LL GIN IAT++KMR PGM  M MPIF WT  C+ ILI  AFP+LT
Sbjct: 193 DYFIWALQIAGVGSLLGGINFIATVVKMRCPGMTFMRMPIFVWTTFCSMILIALAFPILT 252

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDR +G HFFT   GGN+MMY+NLIW WGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 253 VSLALLTLDRLLGMHFFTQYAGGNMMMYINLIWAWGHPEVYILILPAFGVFSEVVATFSQ 312

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY +MVYAT  IT LS+IVWLHHFFTMGSG +VNAFFGI TMII++PTG KIFNWL
Sbjct: 313 KKLFGYVTMVYATFAITFLSFIVWLHHFFTMGSGGDVNAFFGIATMIIAVPTGVKIFNWL 372

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I    P+LW   F ITF IGG+ GV++A+P  +F +HNSLFLVAHFHNVIIGG
Sbjct: 373 FTMYKGKIIMRTPMLWVFAFFITFTIGGVTGVLMAIPPIDFQVHNSLFLVAHFHNVIIGG 432

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YWFPKAFG++L+   G+ SF FW+ GFY+AFMPLY+LG MGV RR++H+ 
Sbjct: 433 VLFGFFAGLIYWFPKAFGFQLDERLGQWSFLFWVAGFYMAFMPLYLLGLMGVMRRLNHYA 492

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D++LQ +F +AA G  LI +GIL  I Q+IVS + R  L D TGD WNGRT EWS +SP 
Sbjct: 493 DVTLQPYFIVAAIGAALIMIGILLQIAQIIVSIKNRDKLRDKTGDIWNGRTFEWSVASPA 552

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD--------KFQDILMPKNTNIGILISIFSL 532
           P YNFAFIP + + D +W  KK      +         +++DI MP+NT+ G +I++F+ 
Sbjct: 553 PFYNFAFIPKVEERDQYWEDKKKAKMEGRPLRVNPEHIQYKDIHMPRNTSAGFVIAMFAG 612

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + GFA+VWHMW+  II  +  +  VI  TF+   +YY+ +E +  IE + 
Sbjct: 613 VFGFAVVWHMWIPAIIGIVGVIATVIARTFSKDIDYYVKAETVKQIELQH 662


>gi|422297280|ref|ZP_16384918.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas avellanae
           BPIC 631]
 gi|407991343|gb|EKG33226.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas avellanae
           BPIC 631]
          Length = 670

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/586 (58%), Positives = 450/586 (76%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGSEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R +  D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDSNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K+    +    ++  I MP NT  G+ + +   + GFA +
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYNVPARYSAIHMPNNTATGLYMGMLLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +S I T+ + + +     + Y + +E++  IE +  ++
Sbjct: 608 WHIWWLVGVSLIATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|427698428|ref|ZP_18965027.1| cytochrome o ubiquinol oxidase subunit I, partial [Salmonella
           enterica subsp. enterica serovar Typhimurium str. STm5]
 gi|414067336|gb|EKT47713.1| cytochrome o ubiquinol oxidase subunit I, partial [Salmonella
           enterica subsp. enterica serovar Typhimurium str. STm5]
          Length = 564

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/551 (64%), Positives = 443/551 (80%), Gaps = 1/551 (0%)

Query: 33  NQIFTAHGVIMIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMIS 92
           +QIFTAHGVIMIFFVAMP V G++N +VPLQIGARDVAFPFLNNLSFW T  G ILV +S
Sbjct: 1   DQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLS 60

Query: 93  LFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPG 152
           L +GEFA TGWL YPPLSGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPG
Sbjct: 61  LGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPG 120

Query: 153 MKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLI 212
           M +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLI
Sbjct: 121 MTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLI 180

Query: 213 WIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMG 272
           W WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG
Sbjct: 181 WAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMG 240

Query: 273 SGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGV 332
           +GANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV
Sbjct: 241 AGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGV 300

Query: 333 ILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWF 392
           +LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWF
Sbjct: 301 LLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWF 360

Query: 393 WLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS 452
           W+IGF+VAFMPLY+LGFMG+TRR+S   D        +AA G  LIA+GIL  +IQ+ VS
Sbjct: 361 WIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVS 420

Query: 453 YRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DK 511
            R R    D+TGDPW GRTLEWSTSSPPP YNFA +P +H+ D++W MK+    + +  +
Sbjct: 421 IRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQ 480

Query: 512 FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYIS 571
           +++I MPKN+  GI+I+ F+ + GFA++WH+W L I+ F   +I  I  +F+   +YY+ 
Sbjct: 481 YEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVP 540

Query: 572 SEEITCIEKKR 582
             E+  +E + 
Sbjct: 541 VPEVEKLENQH 551


>gi|395650943|ref|ZP_10438793.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas
           extremaustralis 14-3 substr. 14-3b]
          Length = 672

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/583 (59%), Positives = 449/583 (77%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGAPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINVSLGVGEFAKTGWVAYPPLSGLKYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMK+M+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKMMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLVLLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+R    ++WT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRMTSQVVWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFFFPKAFGFKLHDGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A  G +LIA+GI   +IQL VS R R   +  +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMIGAVLIAVGIACQLIQLYVSVRDRKQNMCESGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K+N   + K K ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKENGTAYLKPKHYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+S + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIVSLVGTIGYFIVHAARDDQGYMVPVETIERIEAEQ 650


>gi|429109236|ref|ZP_19171006.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter malonaticus
           507]
 gi|426310393|emb|CCJ97119.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter malonaticus
           507]
          Length = 554

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/543 (64%), Positives = 429/543 (79%), Gaps = 1/543 (0%)

Query: 43  MIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTG 102
           MIFFVAMP V G++N +VPLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TG
Sbjct: 1   MIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTG 60

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           W+ YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FT
Sbjct: 61  WVAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFT 120

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           W +LCTN+LI+ +FP+LT  + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYI
Sbjct: 121 WASLCTNVLIIVSFPILTVTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYI 180

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           LVLPVFG+FSE+ STFS KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFG
Sbjct: 181 LVLPVFGVFSEITSTFSKKRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFG 240

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           ITTMII+IPTG KIFNWLFTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+
Sbjct: 241 ITTMIIAIPTGVKIFNWLFTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFV 300

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHNVIIGGV+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FM
Sbjct: 301 LHNSLFLIAHFHNVIIGGVVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFM 360

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDI 462
           PLY +GFMG+TRR+S   D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+
Sbjct: 361 PLYAMGFMGMTRRVSQNIDPMFQPLMIVAEIGALLIACGILCIILQIYVSIRDRHLNRDL 420

Query: 463 TGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNT 521
           TGDPW GRTLEW+TSSPPP YNFA +P IH+ D++W +K     + +   +++I MPKN+
Sbjct: 421 TGDPWGGRTLEWATSSPPPFYNFAVVPEIHERDAFWEIKDKGEAYKQPAHYEEIHMPKNS 480

Query: 522 NIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
             GI I  FS I GFA++WH+W L I+ F   +I  I  +F+   +YY+    +  +E +
Sbjct: 481 AAGIFIGAFSTIFGFAMIWHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQ 540

Query: 582 RIR 584
              
Sbjct: 541 HFE 543


>gi|404403218|ref|ZP_10994802.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fuscovaginae
           UPB0736]
          Length = 672

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/587 (59%), Positives = 452/587 (77%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPP HY+QIFTAHGVIMI F+AMP  TG++N +V
Sbjct: 68  MLLRGFADAIMMRSQLAMATEGSPGYLPPHHYDQIFTAHGVIMIIFMAMPFFTGLMNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMK+M+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKMMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYLDFHVFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGANVNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRGR+RF   +LWT+GFM+TF IGGM GV+LAVP A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYRGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G ++WFPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFWFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A  G ++IA GI   +IQ+ VS R R   +D+TGDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAFVGAVMIAFGIACQLIQIYVSVRDRKQNLDVTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P   + D++   K+N   +  PK ++Q I MP NT  G+++     + GFA+
Sbjct: 548 PFYNFAELPKADEVDAFTEAKENGTAYSVPK-RYQPIHMPNNTATGLVMGALLTVFGFAM 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH+W + I S   T+I  I +     + Y +  E I  IE ++ ++
Sbjct: 607 IWHIWWMAIASLAGTVIYFIIHAARDDQGYMVPVETIERIEAEQQKV 653


>gi|162147818|ref|YP_001602279.1| ubiquinol oxidase subunit 1 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786395|emb|CAP55977.1| Ubiquinol oxidase subunit 1 [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 664

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 446/587 (75%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           L RGF DAVMMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  ++G++N IVP
Sbjct: 69  LARGFADAVMMRSQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMSGLMNVIVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N++SFWMT+   +L+ ISLFIGEF+  GWL YPPLS +  SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNSVSFWMTTISFVLINISLFIGEFSQCGWLAYPPLSELQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+GIN   TI+KMRAPGM  M MP+FTWT LC  +LI+ AFP LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGINFFTTIVKMRAPGMTFMKMPVFTWTILCNTVLIMVAFPFLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            L L  LDRY G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 ALALLGLDRYFGMHFFTNDGGGNQMLYLNLIWAWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY++MVYAT  I  LS +VW HHFFTMG+GANVNAFFGI TMII+IPTG KIFNWLF
Sbjct: 309 PLFGYNTMVYATCSIMGLSLVVWAHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           T+Y+GR+ F   + W IGFM+TF IGGM GV+LA+PAA+F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TIYKGRVEFNGIMYWVIGFMVTFSIGGMTGVMLAIPAADFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ + +W+PKAFG+K+   WGK +FW WL+GFY+AFMPLY+LGF G+TRRM H+++
Sbjct: 429 YFGYVAAMAFWWPKAFGFKMNEAWGKRAFWCWLVGFYMAFMPLYVLGFEGMTRRMDHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A+ G  ++A+G++  + Q+ VS R R+     D+TGDPWN RTLEWSTSSP
Sbjct: 489 PAWHPWMVMASIGAAIVALGVVCQLTQIYVSIRDRNLPESRDLTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+   + +     +Q I MPKNT+ G  I +FSLI+GFA
Sbjct: 549 PPFYNFAVVPTVHELDAFAHDKEAGIDTRSAGATYQPIHMPKNTSAGFFIGVFSLILGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            VW++W L  +  +  +  +I  + N   +YY+ + E+  IE +  R
Sbjct: 609 AVWYIWWLAAVGLLGVIGTLIARSSNNDVDYYVPAAEVARIENEHTR 655


>gi|209542441|ref|YP_002274670.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530118|gb|ACI50055.1| cytochrome o ubiquinol oxidase, subunit I [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 664

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 447/587 (76%), Gaps = 4/587 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           L RGF DAVMMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  ++G++N IVP
Sbjct: 69  LARGFADAVMMRSQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMSGLMNVIVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N++SFWMT+   +L+ ISLFIGEF+  GWL YPPLS +  SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNSVSFWMTTISFVLINISLFIGEFSQCGWLAYPPLSELQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+GIN   TI+KMRAPGM  M MP+FTWT LC  +LI+ AFP LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGINFFTTIVKMRAPGMTFMKMPVFTWTILCNTVLIMVAFPFLTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            L L  LDRY G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 ALALLGLDRYFGMHFFTNDGGGNQMLYLNLIWAWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY++MVYAT  I  LS +VW HHFFTMG+GANVNAFFGI TMII+IPTG KIFNWLF
Sbjct: 309 PLFGYNTMVYATCSIMGLSLVVWAHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           T+Y+GR+ F   + W IGFM+TF IGGM GV+LA+PAA+F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TIYKGRVEFNGIMYWVIGFMVTFSIGGMTGVMLAIPAADFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ + +W+PKAFG+K+   WGK +FW WL+GFY+AFMPLY+LGF G+TRRM+H+++
Sbjct: 429 YFGYVAAMAFWWPKAFGFKMNEAWGKRAFWCWLVGFYMAFMPLYVLGFEGMTRRMNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSSP 479
            +   W  +A+ G  ++A+G++  + Q+ VS R R+     D+TGDPWN RTLEWSTSSP
Sbjct: 489 PAWHPWMVMASIGAAIVALGVVCQLTQIYVSIRDRNLPESRDLTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+   + +     +Q I MPKNT+ G  I +FSLI+GFA
Sbjct: 549 PPFYNFAVVPTVHELDAFAHDKEAGIDTRSAGATYQPIHMPKNTSAGFFIGVFSLILGFA 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            VW++W L  +  +  +  +I  + N   +YY+ + E+  IE +  R
Sbjct: 609 AVWYIWWLAAVGLLGVIGTLIARSSNNDVDYYVPAAEVARIENEHTR 655


>gi|28868534|ref|NP_791153.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213968332|ref|ZP_03396476.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tomato T1]
 gi|301383464|ref|ZP_07231882.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060279|ref|ZP_07251820.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tomato K40]
 gi|302129916|ref|ZP_07255906.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28851772|gb|AAO54848.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213926970|gb|EEB60521.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           tomato T1]
          Length = 670

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/586 (58%), Positives = 450/586 (76%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R +  D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDSNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K+    +    ++  I MP NT  G+ + +   + GFA +
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYNVPARYSAIHMPNNTATGLYMGMLLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 608 WHIWWLVGVSLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|392410290|ref|YP_006446897.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Desulfomonile
           tiedjei DSM 6799]
 gi|390623426|gb|AFM24633.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Desulfomonile
           tiedjei DSM 6799]
          Length = 659

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/585 (58%), Positives = 451/585 (77%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MR QQA++ G + GYL P+H+NQIF+AHG IMI F+AMP + G++N +V
Sbjct: 68  MLLRGFSDAILMRGQQAVAAGGALGYLSPDHFNQIFSAHGSIMIVFMAMPFLVGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN+LS W+T+ GA+L+M+SL +GEF+  GW GY PL+ I  SP VGV
Sbjct: 128 PQQIGARDVAFPFLNSLSLWLTAAGALLIMVSLGVGEFSKAGWSGYTPLTEIEFSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS QIAGIG+ L+GIN + TIIKMRAPGM LM MP+F WT+  T +L+V AFPVLT
Sbjct: 188 DYWIWSFQIAGIGSTLTGINFMVTIIKMRAPGMTLMRMPLFVWTSFFTMVLVVWAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+LGGN+MMYVNL W W HPEVYIL+ P FG+FSEV +TFS 
Sbjct: 248 AALAMLTLDRYLGMHFFTNNLGGNLMMYVNLFWTWAHPEVYILIFPAFGVFSEVTATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+AT  IT+LS+ VW+HHFFTMG+ ANVN FFGI TM+I IPTG K FNWL
Sbjct: 308 KRLFGYTSMVWATAAITVLSFSVWMHHFFTMGASANVNLFFGIATMLIGIPTGVKTFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+LWT+G ++TF IGG +GV+L++P+AN+++HNSLF++ HFHN II G
Sbjct: 368 FTMYRGRIRFTTPMLWTLGAIVTFAIGGTSGVLLSIPSANYVIHNSLFVIGHFHNTIIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FGL +G  YWFPKA G++L   WGK +FW WLIGF +AF+PLY+LGFMG+ RRM+++ 
Sbjct: 428 TVFGLFAGYYYWFPKAVGFRLNENWGKRAFWCWLIGFLLAFVPLYVLGFMGMPRRMAYYA 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
             +   +  +AA G  +I++GIL   IQL+VS ++R  L D TGDPW+GRTLEW TSSPP
Sbjct: 488 TTAWHPYLLVAALGVAVISLGILFQGIQLLVSIKERTALRDRTGDPWDGRTLEWMTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PVYNFA IP++++ D++  MK+ +  + + D++ DI MPKN   GI++   + + GFA++
Sbjct: 548 PVYNFAKIPVVNEIDAFMDMKEKDIAYRRPDRYTDIEMPKNAPHGIILGGLAFVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L  ++ +  L  VI  + +   +Y I + E+  IE +R R
Sbjct: 608 WHIWWLATLAALGMLFTVIARSMDDDIHYVIPATEVERIENERYR 652


>gi|347761886|ref|YP_004869447.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347580856|dbj|BAK85077.1| cytochrome o ubiquinol oxidase subunit I [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 664

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/585 (58%), Positives = 442/585 (75%), Gaps = 4/585 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  + G++N +VP
Sbjct: 69  LFRGFADAIMMRSQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMQGLMNIVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N LSFWMT+   +LV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNTLSFWMTTISFLLVNVSLFIGEFSQCGWLAYPPLSEQQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+G+N  ATI+KMRAPGM  M MP+FTWT  CT +LI+ AFP+LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGVNFFATIVKMRAPGMTYMRMPVFTWTIFCTTVLIMVAFPILTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY+G HFFTND GGN M+Y+++IW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 AMGLLGLDRYLGMHFFTNDGGGNQMLYLSVIWGWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY +MVYAT  I +LS +VW+HHFFTMG+G NVNAFFGI TMII++PTG KIFNWLF
Sbjct: 309 PLFGYKTMVYATASIMVLSLVVWVHHFFTMGAGPNVNAFFGIMTMIIAVPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI F   + W IGFMITF IGGM GV+LA+PA++F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TMYKGRIEFHATMYWVIGFMITFSIGGMTGVMLAIPASDFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ +N+WFPKAFG+KL   WGK +FW W +GFY AF+PLY+LGF G+TRRM+H+++
Sbjct: 429 YFGYVAAMNFWFPKAFGFKLNEAWGKRAFWLWFVGFYFAFVPLYVLGFEGMTRRMNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSSP 479
                W  +A  G ++IA GI+  + QL VS R R+    +D+TGDPWN RTLEWSTSSP
Sbjct: 489 PEWHPWLLLAEVGAVMIAGGIVCQLTQLYVSIRDRNLAENMDLTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+   + +     +Q I MPKNT  G LI  FS ++GF 
Sbjct: 549 PPFYNFAILPEVHELDAFAHDKEAGIDTRQAGGNYQPIHMPKNTACGFLIGAFSFVLGFG 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            +W++W L  +  I  +  VI  + +   +YY+   E+  IE++ 
Sbjct: 609 AIWYIWWLAAVGLIGVIATVIARSSDNDVDYYVPVSEVVRIEQEH 653


>gi|118591211|ref|ZP_01548610.1| cytochrome o ubiquinol oxidase subunit I [Stappia aggregata IAM
           12614]
 gi|118436287|gb|EAV42929.1| cytochrome o ubiquinol oxidase subunit I [Stappia aggregata IAM
           12614]
          Length = 679

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/584 (59%), Positives = 441/584 (75%), Gaps = 2/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA S  S  GYLPPEH+ QIF++HG IMIFFVAMP +TG+IN IV
Sbjct: 68  MLVRGFVDALMMRAQQAFSLNSE-GYLPPEHFEQIFSSHGTIMIFFVAMPFLTGLINIIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPFLN++S WMT+ GA LV+ISL +G+F+  GW GYPP SG+  SPGVGV
Sbjct: 127 PQQIGARDVAFPFLNSVSLWMTAAGAALVLISLVVGKFSQAGWTGYPPYSGVEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+L  +G+G+ LSGIN I TI+K R PGM  M MP+FTWT LC +ILI  +FP LT
Sbjct: 187 DYWLWALITSGVGSTLSGINFIVTIVKNRCPGMTFMRMPMFTWTTLCISILIAFSFPALT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            V    TLDR +G HFFTN  GGN+MM+ NL+WIWGHPEVYIL+LP FGIFSEVV+TFS 
Sbjct: 247 VVAGQLTLDRTLGFHFFTNGDGGNMMMFANLLWIWGHPEVYILILPAFGIFSEVVATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+VYAT  I LLS+ VWLHHFFTMGS ANVNA FGI TMII++PTG KIF+WL
Sbjct: 307 KRLFGYTSLVYATACIALLSFTVWLHHFFTMGSSANVNAIFGIATMIIAVPTGVKIFDWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +++TIGFM+TFVIGG+ GV+LA+P A++L+HNS FLVAHFHN++I G
Sbjct: 367 FTMYKGRIEFHPSMVYTIGFMVTFVIGGVTGVLLALPPADYLMHNSTFLVAHFHNMLIPG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G+NYWFPKAFG+KL+  WG  SFW W+IGFY+AFMPLY+LGF G++RRM H+ 
Sbjct: 427 ALFGYFAGLNYWFPKAFGFKLDTKWGIRSFWCWIIGFYLAFMPLYVLGFKGMSRRMEHYA 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + Q +  +AA G L +  GI    IQL VS RK  +  DITGDPWNGRTLEW+TSSPP
Sbjct: 487 DPTWQPYLIVAAIGALFVLCGIACIAIQLYVSARKWGSARDITGDPWNGRTLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D++  MK     + P   ++DI+MPKNT IG  +   +  +GFA V
Sbjct: 547 APYNFAVLPEVTDIDAFHDMKILGQAYQPPQHYEDIVMPKNTWIGPALGALAFALGFAFV 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           W++W L  + F+++L+ V     +    + + + E+  IE++R+
Sbjct: 607 WYIWWLVALCFVLSLVCVGIRASDDNSEFVLPAAEVARIERERL 650


>gi|330993476|ref|ZP_08317411.1| Ubiquinol oxidase subunit 1 [Gluconacetobacter sp. SXCC-1]
 gi|329759506|gb|EGG76015.1| Ubiquinol oxidase subunit 1 [Gluconacetobacter sp. SXCC-1]
          Length = 664

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/585 (58%), Positives = 441/585 (75%), Gaps = 4/585 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           LFRGF DA+MMR Q A+++  + GYLPP HY+QIF+AHG IMIFF+AM  + G++N +VP
Sbjct: 69  LFRGFADAIMMRSQLALAYAGNPGYLPPHHYDQIFSAHGTIMIFFMAMAFMQGLMNIVVP 128

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDVAFPF+N LSFWMT+   +LV +SLFIGEF+  GWL YPPLS    SPGVGVD
Sbjct: 129 LQIGARDVAFPFVNTLSFWMTTISFLLVNVSLFIGEFSQCGWLAYPPLSEQQFSPGVGVD 188

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           YYIW++Q++G+GTLL+G+N  ATI+KMRAPGM  M MP+FTWT  CT +LI+ AFP+LT 
Sbjct: 189 YYIWAVQLSGVGTLLTGVNFFATIVKMRAPGMTYMRMPVFTWTIFCTTVLIMVAFPILTV 248

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            + L  LDRY+G HFFTND GGN M+Y+++IW WGHPEVYILVLP FG FSE+  TFS K
Sbjct: 249 AMGLLGLDRYLGMHFFTNDGGGNQMLYLSVIWGWGHPEVYILVLPAFGAFSEITQTFSRK 308

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
            LFGY +MVYAT  I +LS +VW+HHFFTMG+G NVNAFFGI TMII++PTG KIFNWLF
Sbjct: 309 PLFGYKTMVYATASIMVLSLVVWVHHFFTMGAGPNVNAFFGIMTMIIAVPTGVKIFNWLF 368

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TMY+GRI F   + W IGFMITF IGGM GV+LA+PA++F+LHNSLF++AHFHNVIIGGV
Sbjct: 369 TMYKGRIEFHATMYWVIGFMITFSIGGMTGVMLAIPASDFVLHNSLFVIAHFHNVIIGGV 428

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
            FG ++ +N+WFPKAFG+KL   WGK +FW W +GFY AF+PLY+LGF G+TRRM+H+++
Sbjct: 429 YFGYVAAMNFWFPKAFGFKLNEAWGKRAFWLWFVGFYFAFVPLYVLGFEGMTRRMNHYDN 488

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLI--DITGDPWNGRTLEWSTSSP 479
                W  +A  G ++IA GI+  + QL VS R R+     D+TGDPWN RTLEWSTSSP
Sbjct: 489 PEWHPWLLLAEVGAVMIACGIVCQLTQLYVSIRDRNLAENRDLTGDPWNARTLEWSTSSP 548

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFA +P +H+ D++ + K+   + +     +Q I MPKNT  G LI  FS ++GF 
Sbjct: 549 PPFYNFAILPEVHELDAFAHDKEAGIDTRQAGGNYQPIHMPKNTACGFLIGAFSFVLGFG 608

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            +W++W L  +  I  +  VI  + +   +YY+   E+  IE++ 
Sbjct: 609 AIWYIWWLAAVGLIGVIATVIARSSDNDVDYYVPVSEVVRIEQEH 653


>gi|387895547|ref|YP_006325844.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fluorescens
           A506]
 gi|388467931|ref|ZP_10142141.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas synxantha
           BG33R]
 gi|387161017|gb|AFJ56216.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           A506]
 gi|388011511|gb|EIK72698.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas synxantha
           BG33R]
          Length = 672

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/583 (59%), Positives = 447/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINVSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R   +  +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRKKNMCESGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K++   + K K ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKEDGTAYQKPKHYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I S + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIASLVGTIGYFIIHAARDDQGYMVPVETIERIEAEQ 650


>gi|423693491|ref|ZP_17668011.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           SS101]
 gi|388001981|gb|EIK63310.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           SS101]
          Length = 672

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/583 (59%), Positives = 447/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINVSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R   +  +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRKQNMCESGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K++   + K K ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKEDGTAYQKPKHYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I S + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIASLVGTIGYFIIHAARDDQGYMVPVETIERIEAEQ 650


>gi|422656648|ref|ZP_16719093.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           lachrymans str. M302278]
 gi|331015177|gb|EGH95233.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas syringae pv.
           lachrymans str. M302278]
          Length = 670

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/586 (58%), Positives = 449/586 (76%), Gaps = 1/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+ NWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLLNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                I+  +A FG +LIAMGI S +IQL VS R R +  D+TGDPWNG TLEWSTSSPP
Sbjct: 488 MPEWNIYLDVALFGAVLIAMGIASQLIQLFVSIRDRDSNRDLTGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K+    +    ++  I MP NT  G+ + +   + GFA +
Sbjct: 548 PFYNFAELPKADDIDPFTDAKRAGTAYNVPARYSAIHMPNNTATGLYMGMLLTVFGFAFI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           WH+W L  +S + T+ + + +     + Y + +E++  IE +  ++
Sbjct: 608 WHIWWLVGVSLVATIAVFVAHAVRDDQGYMVPAEDVARIEGEHHKV 653


>gi|408478919|ref|ZP_11185138.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. R81]
          Length = 672

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/583 (58%), Positives = 446/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINVSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R      +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRKQNACESGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K++   + + K ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKEDGTAYQRPKHYEPIHMPSNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I S + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIASLVGTIGYFIIHAARDDQGYMVPVETIERIEAEQ 650


>gi|20378344|gb|AAM20915.1|AF439739_2 cytochrome bo subunit B [Vitreoscilla sp. C1]
          Length = 666

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/593 (59%), Positives = 453/593 (76%), Gaps = 9/593 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA MMRLQ +++     GYL PEHY+QIFTAHGVIMIFFVAM LV G++N +V
Sbjct: 67  MLVRGFADAFMMRLQLSMAASGGPGYLTPEHYDQIFTAHGVIMIFFVAMGLVVGLMNVVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+P LNN SFW+   G ILVM SL IGEFA+ GWL YPPLSGI  SPGVGV
Sbjct: 127 PLQIGARDVAYPLLNNFSFWLFVSGVILVMASLVIGEFAAVGWLAYPPLSGIDYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+G+NM+ TI++MR P M LM MPIFTWT L   ++I+A FPVLT
Sbjct: 187 DYYIWALQLSGLGTLLTGVNMVVTILRMRTPSMSLMQMPIFTWTTLVAAMMILATFPVLT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + T+DR +  HFFTNDLGG+ M+YVNLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLTVDRVMDFHFFTNDLGGSPMLYVNLIWTWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY  MVYA+  I +LS IVW+HHFFTMG+G +VNAFFGI TM+I+IPTG KIFNW+
Sbjct: 307 KRLFGYRGMVYASGAIAVLSMIVWVHHFFTMGAGPSVNAFFGIMTMVIAIPTGVKIFNWI 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+IRFEVP+LW +GF++TF +GGM GV+L++P A+F++HNSLFLVAHFHN IIGG
Sbjct: 367 FTMYKGKIRFEVPMLWAVGFLVTFTVGGMTGVLLSIPPADFVVHNSLFLVAHFHNTIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSH-- 418
           V+FGLM+G+ +W+PK FG+KL    G+ SFW W  GF++AF+PLYILGFMG+TRRM+   
Sbjct: 427 VVFGLMAGLTFWWPKMFGFKLNDRLGRASFWCWFWGFWLAFVPLYILGFMGMTRRMNTIG 486

Query: 419 FEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS---YRKRHTLIDITGDPWNGRTLEWS 475
            +      +  +A  G ++IA+GI   ++ ++ S   Y    +  D+TGDPW GRTL+W+
Sbjct: 487 LDHPEWAPYLHVAFIGAVVIAIGIGLTVLNILWSIKVYLTDKSNADVTGDPWGGRTLDWA 546

Query: 476 TSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIM 534
           TSSPPP YNFA +P I+  D +WY K++   +P + K+++I MPKN  +G++++    + 
Sbjct: 547 TSSPPPFYNFAKLPEINDIDQFWYDKEHGKAYPNNVKYEEIHMPKNRTVGVVMAGLLTVF 606

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK---KRIR 584
           GFA VWH+W L  +S I T+   I ++FN K +YY+  + +   E+   KR+R
Sbjct: 607 GFAFVWHIWWLVAVSLIATIGAFIISSFNTKHDYYVDVDTVKKTEEAQLKRVR 659


>gi|229592523|ref|YP_002874642.1| cytochrome C oxidase (ubiquinol oxidase) subunit I [Pseudomonas
           fluorescens SBW25]
 gi|229364389|emb|CAY52172.1| cytochrome C oxidase (ubiquinol oxidase) subunit I [Pseudomonas
           fluorescens SBW25]
          Length = 672

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/583 (58%), Positives = 446/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINVSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R      +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAIMIAVGIACQLIQLYVSIRDRKQNACDSGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K++   + + K ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKEDGTAYQRPKHYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+  + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIVGLVGTIGYFIVHAARDDQGYMVPVETIERIEAEQ 650


>gi|402575125|ref|YP_006608017.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Candidatus
           Portiera aleyrodidarum BT-B-HRs]
 gi|407453140|ref|YP_006732459.1| ubiquinol oxidase subunit I [Candidatus Portiera aleyrodidarum
           BT-QVLC]
 gi|407681477|ref|YP_006796653.1| Cytochrome O ubiquinol oxidase subunit I [Candidatus Portiera
           aleyrodidarum BT-QVLC]
 gi|407681758|ref|YP_006796933.1| Cytochrome O ubiquinol oxidase subunit I [Candidatus Portiera
           aleyrodidarum BT-B-HRs]
 gi|401871929|gb|AFQ24097.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Candidatus
           Portiera aleyrodidarum BT-B-HRs]
 gi|405779857|gb|AFS18860.1| Ubiquinol oxidase subunit 1 [Candidatus Portiera aleyrodidarum
           BT-QVLC]
 gi|407243088|gb|AFT80489.1| Cytochrome O ubiquinol oxidase subunit I [Candidatus Portiera
           aleyrodidarum BT-QVLC]
 gi|407243369|gb|AFT80769.1| Cytochrome O ubiquinol oxidase subunit I [Candidatus Portiera
           aleyrodidarum BT-B-HRs]
          Length = 649

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/581 (62%), Positives = 456/581 (78%), Gaps = 1/581 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGFTDAVMMRLQQ I++ ++ GYLP  HY+QIFT HGVIMIFF+AMP + G++N IV
Sbjct: 68  MLIRGFTDAVMMRLQQVIAYKNNIGYLPSYHYDQIFTVHGVIMIFFMAMPFMFGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LS W+T    +L+ ISLFIGEFASTGWL YPPLSGI  S GVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSLWLTVFSGVLINISLFIGEFASTGWLAYPPLSGIEFSKGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQI+GIGTL++GIN + TI+KMRAPGM+ M +PIFTWT LC+N+LI+ +FP+LT
Sbjct: 188 DYWIWSLQISGIGTLIAGINFVVTILKMRAPGMEFMRLPIFTWTILCSNLLIIMSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L TLDRY+   FFTN  GGN MMYVNLIW WGHPEVYIL+LP FGI+SE+VSTF  
Sbjct: 248 ATISLLTLDRYLNMQFFTNHFGGNPMMYVNLIWAWGHPEVYILILPAFGIYSEIVSTFCK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+ +VYAT+VIT LS+IVWLHHFFTMG+GA+VNAFFGI+TMIISIPTG KIFNWL
Sbjct: 308 KKLFGYNLLVYATIVITGLSFIVWLHHFFTMGAGADVNAFFGISTMIISIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I F +P+LWT+GF+I F IGGMAGV+LA+P  +FLLHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYKGKIEFGIPMLWTVGFLIAFSIGGMAGVLLAIPGVDFLLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG ++G+NYWFPK FG+KL    GK +   WLIG +VAF+PLYILG +G+TRR+S++ 
Sbjct: 428 VLFGYLAGLNYWFPKIFGFKLNEKIGKYTVVCWLIGLFVAFVPLYILGVLGMTRRVSYYN 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  IA FGT++I  G++  ++Q+I S  ++    D +GD WNGRTLEWS SSPP
Sbjct: 488 NKIWHRFLLIAMFGTIIILFGVIGQVLQVIRSIIEKDNNKDYSGDMWNGRTLEWSISSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
             YNFA IP I   D    +KK  +   K+K++ I MPK+T     IS+FSLI  F++VW
Sbjct: 548 NSYNFANIPYIIDRDQVLLLKKRQY-VKKNKYKKIKMPKDTCKAFFISLFSLIFSFSMVW 606

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           ++W L+II F+  +   ++  ++ K+  YI  EEI   EK+
Sbjct: 607 YIWWLSIIGFVGMISTYMFYLYSTKKVSYIKVEEIKNNEKR 647


>gi|254252015|ref|ZP_04945333.1| cytochrome oxidase subunit 1 [Burkholderia dolosa AUO158]
 gi|124894624|gb|EAY68504.1| cytochrome oxidase subunit 1 [Burkholderia dolosa AUO158]
          Length = 668

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/586 (60%), Positives = 449/586 (76%), Gaps = 6/586 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR+Q A+++ +  GYLPP HY+QIFTAHGVIMIFF+AM  + G++N IV
Sbjct: 68  MLLRGFADAIMMRMQLALAYNAP-GYLPPHHYDQIFTAHGVIMIFFMAMVFMVGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ ISL IGEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVSAILINISLVIGEFAQTGWLAYPPLSELQFSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+G+N   TIIKMRAPGM LM MP+FTWTALCTN+LI+A+FP+LT
Sbjct: 187 DYYLWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFTN+ GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEV++TF+ 
Sbjct: 247 ATLALLGLDRYLGMHFFTNEAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVIATFAK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MVYAT  I +LS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG K+FNWL
Sbjct: 307 KPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFH  I+GG
Sbjct: 367 FTMYRGRIRFTTPVLWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHKGIMGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V  G ++G N W         E    +       +GFYVAF+PLY+LGFMG+TRR++H++
Sbjct: 427 VALGYLAGFNLWVSGRRSASAEREARQGRVLVRQVGFYVAFVPLYVLGFMGMTRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRH--TLIDITGDPWNGRTLEWSTSS 478
           + +   W  +AAFG +LIA+GI   ++QL+VS R R+     D +GDPW GRTLEW+T+S
Sbjct: 487 NPAWHPWLLVAAFGAVLIAIGIACQLLQLVVSIRNRNLPAYRDTSGDPWGGRTLEWATTS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PP  YNFA IP +   D++  MK      P     +DI MP NT  G++I IFSL++GFA
Sbjct: 547 PPAAYNFAVIPQVRTLDAYADMKARGDGRPDPAAIRDIHMPSNTCAGLVIGIFSLVLGFA 606

Query: 538 LVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           LVWH+W L I   + I   +VIY++ +    YYI +  +  IE+K+
Sbjct: 607 LVWHIWWLAIAGLVGIVATLVIYSSRD-NDGYYIPASTVRKIEEKQ 651


>gi|395797091|ref|ZP_10476383.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. Ag1]
 gi|421142338|ref|ZP_15602314.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           BBc6R8]
 gi|395338795|gb|EJF70644.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. Ag1]
 gi|404506732|gb|EKA20726.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           BBc6R8]
          Length = 672

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/583 (58%), Positives = 445/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRITSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A  G L+IA+GI   +IQL VS R R   +  +GDPWN  TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMVGALMIAVGIACQLIQLYVSVRDRKQNMCESGDPWNAHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K++   + K  +++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVLPKADSIDPFTEAKEDGTAYQKPARYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+S + T+   I +     + Y +  + I  IE ++
Sbjct: 608 WHIWWLAIVSLVGTIGYFIVHAARDDQGYMVPVDVIERIEAEQ 650


>gi|395496982|ref|ZP_10428561.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. PAMC
           25886]
          Length = 672

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/583 (58%), Positives = 445/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+A SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLAYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRITSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A  G L+IA+GI   +IQL VS R R   +  +GDPWN  TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMVGALMIAVGIACQLIQLYVSVRDRKQNLCESGDPWNAHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K++   + K  +++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVLPKADSIDPFTEAKEDGTAYQKPARYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+S + T+   I +     + Y +  + I  IE ++
Sbjct: 608 WHIWWLAIVSLVGTIGYFIVHAARDDQGYMVPVDVIERIEAEQ 650


>gi|440741186|ref|ZP_20920636.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fluorescens
           BRIP34879]
 gi|447918267|ref|YP_007398835.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas poae
           RE*1-1-14]
 gi|440373274|gb|ELQ10037.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fluorescens
           BRIP34879]
 gi|445202130|gb|AGE27339.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas poae
           RE*1-1-14]
          Length = 672

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/583 (58%), Positives = 444/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  +
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+L 
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILA 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L +LDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FW W+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWLWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG L+IA GI   +IQL VS R R   +  +GDPWNG TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGALMIAAGIACQLIQLYVSVRDRKQNLCESGDPWNGHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP  +  D++   K++   + K   ++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVIPTANTIDAFTEAKEDGTAYQKPAHYEPIHMPNNTATGVVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I+  + T+   I +     + Y +  E I  IE ++
Sbjct: 608 WHIWWLAIVGLVGTIGYFIVHAARDDQGYMVPVETIERIEAEQ 650


>gi|319760379|ref|YP_004124317.1| cytochrome o ubiquinol oxidase subunit I [Candidatus Blochmannia
           vafer str. BVAF]
 gi|318039093|gb|ADV33643.1| cytochrome o ubiquinol oxidase, subunit I [Candidatus Blochmannia
           vafer str. BVAF]
          Length = 661

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/589 (61%), Positives = 447/589 (75%), Gaps = 5/589 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RGF DA+MMR QQA+S      +L   HY+Q+ TAHGVIMI F+A P V G++N IV
Sbjct: 68  MFLRGFADAIMMRTQQALSSLGLSEFLSVHHYDQVVTAHGVIMIIFMATPFVIGLMNIIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G IL+ +SL IGEFA TGW  YPPLS    SP VGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLFMVGVILINLSLGIGEFAQTGWAAYPPLSSKEYSPDVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIGT L+GIN   TI+ MRAPGM +M +P+FTWTALCTN LI+ AFP+LT
Sbjct: 188 DYWIWSIQISGIGTTLTGINFFTTILYMRAPGMSMMKIPVFTWTALCTNALIIVAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L T DRY+GTHFFTNDLGGN+MMY+NL W WGHPEVYIL LP FGIFSE+VSTFS 
Sbjct: 248 VTIALLTFDRYLGTHFFTNDLGGNMMMYINLFWAWGHPEVYILALPAFGIFSEIVSTFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY+++++AT+ IT LS+ VWLHHFFTMG+G+NVNAFFGI TMII+IPTG K+FNWL
Sbjct: 308 KKIFGYTTLIWATIAITALSFCVWLHHFFTMGAGSNVNAFFGIMTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I F+ P+LW IGF+ITF IGGM GV+LA+P  +FLLHNSLFLVAHFHNVIIGG
Sbjct: 368 FTMYQGKIIFKTPMLWAIGFIITFSIGGMTGVLLAIPGIDFLLHNSLFLVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G++YWFPKAFGY L   WGKC+FW W+IGFY+AFMPLYILGFMG+TRR+S   
Sbjct: 428 VLFGCFAGMSYWFPKAFGYTLHENWGKCAFWLWIIGFYIAFMPLYILGFMGMTRRLSQNI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           D         AA GT LI +GIL   IQ+I+S   R ++       DPWNG TLEW+TSS
Sbjct: 488 DTIFSPMLITAAIGTFLIGLGILCQCIQIIISVFNRDKYNNYHDNSDPWNGSTLEWATSS 547

Query: 479 PPPVYNFAFIPLIHQSDS--WWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMG 535
           PPP YNFA IP+I+ + +  W+   + N    K+K ++ I MPKNT+ GILI+ FSL+ G
Sbjct: 548 PPPFYNFAHIPIINNNRNVFWYIENRKNVTLCKNKTYEPIHMPKNTHDGILIAFFSLLFG 607

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           F+++W++W L+I+S    + I I +TFN    YY+ S  I  IE    +
Sbjct: 608 FSMIWYIWWLSILSLFGIIGIWIAHTFNNNTEYYVPSNIIKEIEHAHNK 656


>gi|406916508|gb|EKD55519.1| hypothetical protein ACD_60C00003G0005 [uncultured bacterium]
          Length = 665

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/583 (61%), Positives = 441/583 (75%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+D V+MR QQA++ G S GYLPP+HY+QIFTAHGVIMIFFVAMP +  ++N I+
Sbjct: 74  MLLRGFSDVVLMRSQQALAAGQSMGYLPPDHYDQIFTAHGVIMIFFVAMPFMFALLNMIL 133

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+P+LN+LSFW+T  GA+L  +SL +G+FA TGWL YPPLS +  SPGVGV
Sbjct: 134 PLQIGARDVAYPYLNSLSFWLTFVGAMLCNVSLVVGKFAETGWLAYPPLSELYYSPGVGV 193

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGTLLSGIN IATI+KMR PGM LM MPIF W ALC+ IL+  AFPVLT
Sbjct: 194 DYFIWALQLSGIGTLLSGINFIATIVKMRCPGMSLMKMPIFVWAALCSMILVALAFPVLT 253

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR    HFFT   GGN+M+YVNLIWIWGHPEVYILVLP FGIFSEVV+TFS 
Sbjct: 254 VTLALLALDRLFDMHFFTEFAGGNVMLYVNLIWIWGHPEVYILVLPAFGIFSEVVATFSR 313

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV+A V IT LS+IVWLHHFFTMG+GA+VN FFGI TM+I+IPTG KIFNWL
Sbjct: 314 KRLFGYVTMVWAIVAITFLSFIVWLHHFFTMGAGADVNTFFGIATMVIAIPTGVKIFNWL 373

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I    P+LW   F  TF IGGM GV+LA+P  +F +HNS FLVAHFHNVIIGG
Sbjct: 374 FTMYKGKILLTSPMLWVTAFFTTFAIGGMTGVMLAIPPVDFQVHNSAFLVAHFHNVIIGG 433

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G+ YWFPK FG++L+  W K +F FW+ GFYVAFMPLYILG  G  RR+ H+ 
Sbjct: 434 VLFGYFAGVIYWFPKVFGFRLDEKWSKRAFIFWVSGFYVAFMPLYILGLNGFMRRVEHYA 493

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +++ Q +   AA G  LI +GIL  ++ + VS + RH L D TGD W+GRTLEWS +SP 
Sbjct: 494 NVAYQPYLVCAAIGAALIFIGILLQLVMIGVSVKNRHLLRDRTGDVWDGRTLEWSVASPA 553

Query: 481 PVYNFAFIPLIHQSDSWWYMK---KNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           PVYNFA  P++ + D +W  K   ++    P+   +Q I MPKNT +G LI++F    GF
Sbjct: 554 PVYNFAVTPIVSERDPFWEAKLAARDEIIDPRSFDYQPIHMPKNTAVGFLIAMFLGCFGF 613

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           A+VWHMW+  I+ F+  ++ VI  TF+ + +Y+IS E I   E
Sbjct: 614 AMVWHMWIPGIVGFVGAILTVIARTFSTETDYFISPETIRKTE 656


>gi|413962328|ref|ZP_11401556.1| cytochrome-c oxidase [Burkholderia sp. SJ98]
 gi|413931200|gb|EKS70487.1| cytochrome-c oxidase [Burkholderia sp. SJ98]
          Length = 669

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/584 (60%), Positives = 445/584 (76%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DAVMMR+QQAI+     GYLPP H++QIFTAHG IMIFF+AM L+    N +V
Sbjct: 68  MLVRGFADAVMMRVQQAIALDGP-GYLPPHHFDQIFTAHGTIMIFFMAMALLVAFFNLVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFWMT+  AIL+ +SLFIGEF++TGWL YPPLS    +PGVGV
Sbjct: 127 PLQIGARDVAFPFINSLSFWMTAVAAILINLSLFIGEFSTTGWLAYPPLSETQFNPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GTLL+ +N   TI+KMRAPGM  M MP+FTWTA C+N+LI+A FP+LT
Sbjct: 187 DYYIWALQLSGVGTLLTAVNFFVTIVKMRAPGMTWMKMPVFTWTAFCSNVLIMATFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEVV+TFS 
Sbjct: 247 VALALLALDRYLGMHFFTNDGGGNPMVYLNLIWAWGHPEVYILVLPAFGIYSEVVATFSK 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY +MV+AT  I +LS++VWLHHFFTMGSGANVNAFFGI TM+ISIPTG KIFNWL
Sbjct: 307 KPLFGYKTMVWATCCIMVLSFLVWLHHFFTMGSGANVNAFFGIMTMVISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR++    ILWTIGF+ITF +GGM GV+LA+P A+F+LHNSLFL+AHFHN IIGG
Sbjct: 367 FTMYRGRVQMTSQILWTIGFVITFTLGGMTGVMLAIPGADFVLHNSLFLIAHFHNAIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI+YW+PK FG+KL+   GK +F  W +GF+VAF+P+YILGFMG TRR++H++
Sbjct: 427 VVFGYFAGISYWWPKVFGFKLDEKLGKSAFVCWFVGFFVAFVPIYILGFMGATRRLNHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRHTLIDITGDPWNGRTLEWSTSS 478
           D S Q +F  AA G  +IA+G++  + Q++VS   R +    D+TGDPW  RTLEWS SS
Sbjct: 487 DPSWQPFFIAAAVGVGIIALGVVFQVAQIVVSIIRRNQPAYRDVTGDPWGARTLEWSISS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPPVYNFA IP + + D +   K++  +     ++DI MP NT+ G++I +F+L  GFA 
Sbjct: 547 PPPVYNFANIPAVRELDDFADAKEHG-RIDTRPYRDIHMPSNTSAGLVIGLFALAFGFAA 605

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +WH+W L   S +      I  +F     + I +  +   E++ 
Sbjct: 606 IWHIWWLAAASMVGIFATAIGYSFRDNAGFIIPAATVKSTEERN 649


>gi|429089435|ref|ZP_19152167.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter universalis
           NCTC 9529]
 gi|426509238|emb|CCK17279.1| Cytochrome O ubiquinol oxidase subunit I [Cronobacter universalis
           NCTC 9529]
          Length = 553

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/543 (64%), Positives = 427/543 (78%), Gaps = 2/543 (0%)

Query: 43  MIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTG 102
           MIFFVAMP V G++N +VPLQIGARDVA+PFLNNLSFW T  G ILV +SL +GEFA TG
Sbjct: 1   MIFFVAMPFVIGLMNLVVPLQIGARDVAYPFLNNLSFWFTVVGVILVNVSLGVGEFAQTG 60

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           W+ YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FT
Sbjct: 61  WVAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFT 120

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           W +LCTN+LI+ +F  LT  + L TLDRY+GTHFFTND+GGN+MMYVNLIW WGHPEVYI
Sbjct: 121 WASLCTNVLIIVSFR-LTVTIALLTLDRYLGTHFFTNDMGGNMMMYVNLIWAWGHPEVYI 179

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           LVLPVFG+FSE+ STFS KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFG
Sbjct: 180 LVLPVFGVFSEITSTFSKKRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFG 239

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           ITTMII+IPTG KIFNWLFTMY+GRI+F   +LWTIGF+ITF IGGM GV+LAVP A+F+
Sbjct: 240 ITTMIIAIPTGVKIFNWLFTMYQGRIQFHSSMLWTIGFIITFSIGGMTGVLLAVPGADFV 299

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHNVIIGGV+FG  +G++YW+PKAFGYK+   WG  +FWFW+IGF+V FM
Sbjct: 300 LHNSLFLIAHFHNVIIGGVVFGCFAGMSYWWPKAFGYKMNETWGIRAFWFWIIGFFVTFM 359

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDI 462
           PLY +GFMG+TRR+S   D   Q    +A  G LLIA GIL  I+Q+ VS R RH   D+
Sbjct: 360 PLYAMGFMGMTRRVSQNIDPMFQPLMIVAEIGALLIACGILCIILQIYVSIRDRHLNRDL 419

Query: 463 TGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNT 521
           TGDPW GRTLEW+TSSPPP YNFA +P IH+ D++W MK     + +   +++I MPKN+
Sbjct: 420 TGDPWGGRTLEWATSSPPPFYNFAVVPEIHERDAFWEMKDKGEAYKQPAHYEEIHMPKNS 479

Query: 522 NIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
             GI I  FS I GFA++WH+W L I+ F   +I  I  +F+   +YY+    +  +E +
Sbjct: 480 AAGIFIGAFSTIFGFAMIWHIWWLAIVGFAGIVITWIAKSFDEDVDYYVPVATVEKLENQ 539

Query: 582 RIR 584
              
Sbjct: 540 HFE 542


>gi|402825264|ref|ZP_10874569.1| cytochrome o ubiquinol oxidase subunit I, partial [Sphingomonas sp.
           LH128]
 gi|402261208|gb|EJU11266.1| cytochrome o ubiquinol oxidase subunit I, partial [Sphingomonas sp.
           LH128]
          Length = 511

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/501 (67%), Positives = 416/501 (83%)

Query: 84  GGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIA 143
            GA+L M+SLF+GEFA TGWL YPPLS +A SP VGVDYYIWSLQIAG+GTLLSG+N++ 
Sbjct: 4   AGAVLTMMSLFVGEFAQTGWLAYPPLSNLAYSPWVGVDYYIWSLQIAGVGTLLSGVNLVC 63

Query: 144 TIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGG 203
           TI+KMRAPGM +M MP+FTWT+LCTNILIVAAFPVLT+V+ + T+DRY+G +FF+ND GG
Sbjct: 64  TIVKMRAPGMTMMRMPVFTWTSLCTNILIVAAFPVLTAVMTMLTVDRYLGFNFFSNDFGG 123

Query: 204 NIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIV 263
           + MMYVNLIWIWGHPEVYIL+LP+FG+FSEVVSTFS KRLFGYSSMVYAT+VIT+LSY+V
Sbjct: 124 SPMMYVNLIWIWGHPEVYILILPLFGVFSEVVSTFSGKRLFGYSSMVYATLVITILSYLV 183

Query: 264 WLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMIT 323
           WLHHFFTMGSGA+VN+FFGITTM+ISIPTGAK+FNWLFTMYRGRIR+E+P++WT+ FM+T
Sbjct: 184 WLHHFFTMGSGASVNSFFGITTMVISIPTGAKLFNWLFTMYRGRIRYELPMMWTVAFMLT 243

Query: 324 FVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEP 383
           F +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGVLFG+ + IN+W+PKAFG+KL  
Sbjct: 244 FTVGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGIFAAINFWWPKAFGFKLNQ 303

Query: 384 FWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGIL 443
           FWGK SFW W+ GF+ AFMPLYILG MGVTRRM  F+D S+QIWF IAAFG ++IA GI 
Sbjct: 304 FWGKVSFWLWVPGFWFAFMPLYILGLMGVTRRMRVFDDPSIQIWFVIAAFGAVMIAGGIG 363

Query: 444 SFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKN 503
           + ++Q  VS  KR  L D TGDPWNGRTLEWSTSSPPP YNFAF PL+H  D+W  MK+ 
Sbjct: 364 AMLVQFAVSIWKREELKDETGDPWNGRTLEWSTSSPPPEYNFAFTPLVHDLDAWDDMKRC 423

Query: 504 NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFN 563
             + P   F+ I MP  T  G++++  S  +GFA++W++W L  +SF   +   I++TFN
Sbjct: 424 GVQRPTSGFRPIHMPSGTGTGLILAGLSTALGFAMIWYIWWLAAVSFAGIIGYAIFHTFN 483

Query: 564 YKRNYYISSEEITCIEKKRIR 584
           YKR+Y+I  E +   E +R R
Sbjct: 484 YKRDYHIPVETVEATEAERTR 504


>gi|416653395|ref|ZP_11811839.1| cytochrome o ubiquinol oxidase subunit I, partial [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323214169|gb|EFZ98927.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
          Length = 584

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/503 (68%), Positives = 417/503 (82%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQI 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D        +AA G  LIA+GIL  + Q+ VS R R    D+TGDPW GRTLEWSTSSPP
Sbjct: 488 DPQFHTMLMVAAAGAALIALGILCQLTQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN 503
           P YNFA +P +H+ D++W MK+ 
Sbjct: 548 PFYNFAVVPHVHERDAFWEMKEK 570


>gi|388543525|ref|ZP_10146815.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. M47T1]
 gi|388278082|gb|EIK97654.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas sp. M47T1]
          Length = 673

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/587 (59%), Positives = 444/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A+S     GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLVRGFADALMMRSQLALSANGGEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFARTGWVAYPPLSELGYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++GIGT L+G+N + T++KMR PGMKLM+MPIFTWT    N+LI A+FP+LT
Sbjct: 188 DYYIWALQLSGIGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANVLIAASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEVVSTF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVVSTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+ A+  I +L ++VWLHHFFTMGSGA+VN+FFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHVSMILASGCIAVLGFMVWLHHFFTMGSGASVNSFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF  P++WT+GF+ITF IGGM GV+LA+P A+F+LHNSLF+VAHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTAPVMWTLGFLITFAIGGMTGVLLAIPGADFVLHNSLFVVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  YWFPKAFG+ L   WGK +FWFW+ GFYVAFMPLY LGFMG+TRR++H +
Sbjct: 428 AVFGYIAGFGYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHTD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A  G LLI  GI    IQL VS R R    D+TGDP+NG TLEW TSSPP
Sbjct: 488 NPDWTPYLYVAMGGALLILAGIACQFIQLYVSIRDREQNRDVTGDPYNGHTLEWMTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P YNFA +P  +  D++   K+N   + FP  K+ DI MP NT  G+++S F  + GFA+
Sbjct: 548 PFYNFAVLPTANDIDAFTEAKRNGTAYTFPT-KYTDIHMPNNTATGLVMSAFLTVFGFAM 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           +WH++ L  +  I  +   I +     + Y + + E+  IE +R ++
Sbjct: 607 IWHIFWLAAVGLIGCVGYFIIHAARDDQGYMVPAAEVARIEGERQQI 653


>gi|402698542|ref|ZP_10846521.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas fragi A22]
          Length = 674

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/587 (58%), Positives = 449/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +LV +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLVNLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMRAPGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FT++LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTSELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLNESWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNAST 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG +LIA+GI   +IQL VS R R    +    GDPWNG TLEWSTSS
Sbjct: 488 NPEWVPYLYVALFGAVLIAIGIACQLIQLYVSVRDRKLPQNACEHGDPWNGHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P +   D++   K+N   +    K+  I MP NT  G+ +     + GFA
Sbjct: 548 PPPFYNFAVVPRVDTIDAFTEAKENGTAYQAPAKYSPIHMPNNTATGVYMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I+  + T+++ + +     + Y +  E I  IE ++ +
Sbjct: 608 MIWHIWWLAIVGLVGTVVVFVAHAARDDQGYMVPVETIERIEAEQHK 654


>gi|337268845|ref|YP_004612900.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium
           opportunistum WSM2075]
 gi|336029155|gb|AEH88806.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium
           opportunistum WSM2075]
          Length = 669

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/586 (58%), Positives = 443/586 (75%), Gaps = 5/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     GYLPPEHY+QIF+AHG IMIFF AMP + G++NF V
Sbjct: 70  MLLRGFIDAIMMRTQQVLAIHGP-GYLPPEHYDQIFSAHGTIMIFFAAMPFMIGLMNFAV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++SFW+T+ GA+LV ISL IGEFA TGWL Y PLS    SPGVGV
Sbjct: 129 PLQLGIRDVAFPTLNSVSFWLTASGALLVNISLVIGEFARTGWLPYAPLSETTYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WS+QI+G+GTLL+G+N++ TI+KMRAPGM  + MP+F WT+L +N+LIVAAFP+LT
Sbjct: 189 DYYLWSIQISGVGTLLTGVNLVTTILKMRAPGMGYLRMPMFCWTSLASNLLIVAAFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+ GGN MM+VNLIW WGHPEVYILVLP FGIFSEV STFSS
Sbjct: 249 ATLAMLTLDRYLGFHFFTNEAGGNQMMFVNLIWAWGHPEVYILVLPAFGIFSEVFSTFSS 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+GA+VNA FGI T +I++ TG KI+NWL
Sbjct: 309 KPLFGYRSMVAATMFICIVSFMVWLHHFFTMGAGADVNAAFGIATSVIAVGTGVKIYNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF+ P+LW + F+ TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVII G
Sbjct: 369 FTMYGGRIRFDTPMLWALAFVTTFTVGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIISG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L   WGK +FW  L G+ + F+PLYI+G +G+TRR+ H +
Sbjct: 429 VLFGAFAGFTYWFPKAFGFRLHEGWGKAAFWVTLAGYMLVFVPLYIVGLLGMTRRLQHID 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AAFG L++  G    I+QL VS R R  L D TGDPW+GR+LEWSTSSPP
Sbjct: 489 MDLWAPWLVVAAFGVLVMIAGAALQIMQLAVSIRHRDKLRDETGDPWDGRSLEWSTSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN--NFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           P++N+A +P +   + +W +K+     K P  ++ ++ I MP+N+  G + + FS ++GF
Sbjct: 549 PIFNYARLPYVEDEEPYWGIKQQAREEKRPDAEEAYEPIEMPRNSPTGFVTAFFSTLIGF 608

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           AL+WH+W L I+ FI      +   +    +Y I +EE+  I++ R
Sbjct: 609 ALIWHIWWLAIVGFIGAYATFVVFAWRDHGDYEIPAEEVARIDEGR 654


>gi|365899809|ref|ZP_09437693.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. STM
           3843]
 gi|365419436|emb|CCE10235.1| cytochrome o ubiquinol oxidase, subunit I [Bradyrhizobium sp. STM
           3843]
          Length = 668

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/589 (56%), Positives = 453/589 (76%), Gaps = 8/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG TDA+MMRLQQAI+  S+ GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGTDAIMMRLQQAIALHSN-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV +SL IGEFA TGWL +PPLS +  SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNMSLVIGEFARTGWLPFPPLSELTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L+I+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LI+AAFP+LT
Sbjct: 187 DYYLWALEISGVGTLVAGINLVTTVLKLRTRGMNYLRMPMFCWTTLASNLLIIAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGI+SE+V TFSS
Sbjct: 247 ATLTMLILDRYFGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIYSEIVPTFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G  VNA FGI +MII++PTG KI+NWL
Sbjct: 307 KSLFGYRSMVLATMAICIVSFMVWLHHFFTMGAGPEVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+R+  P+LW++GFM+TF+ GG+ GV+LA+P A+FLLHNSLFLVAHFHNVIIGG
Sbjct: 367 FTMYGGRVRYATPMLWSVGFMVTFLFGGLTGVLLAMPPADFLLHNSLFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G++YWFPKAFG++L   WGK +FWF L+GFY  F+PLY++G +G+TRRM H++
Sbjct: 427 VLFGAFAGVSYWFPKAFGFRLYESWGKAAFWFTLVGFYATFVPLYVVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W   A+ G +++ +G++  I+QL+ S R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 487 VAEWRPWMLAASAGMVVLVVGVVLQILQLVFSIRDRELLRDTTGDPWDGRSLEWATSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKN------NFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           PV+NFA +P +   D++W +K+         K P++ + DI MP+N+  G + + F+ +M
Sbjct: 547 PVFNFAVLPNVTGLDAYWTIKEKAKAEQLRDKAPRE-YDDIEMPRNSPTGFVCAFFATVM 605

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           GFAL+WH+W +  +  +      +   +  +  Y I + ++  I++  I
Sbjct: 606 GFALIWHIWWMVALGAVGAFATFVVFAWRDRDEYVIPAADVARIDRAII 654


>gi|374333797|ref|YP_005086925.1| cytochrome o ubiquinol oxidase subunit I [Pseudovibrio sp. FO-BEG1]
 gi|359346585|gb|AEV39958.1| cytochrome o ubiquinol oxidase subunit I [Pseudovibrio sp. FO-BEG1]
          Length = 665

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/585 (58%), Positives = 441/585 (75%), Gaps = 2/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++  +  GYL PEH++Q+F++HG IMIFF+AMP +TG+IN +V
Sbjct: 68  MLVRGFVDALMMRSQQAMALNND-GYLAPEHFDQVFSSHGTIMIFFMAMPFLTGLINIVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPF+N++S W+T+ GA LVM+SL IG+F++ GW GYPP SG   SPGVGV
Sbjct: 127 PQQIGARDVAFPFMNSISLWLTAAGAALVMVSLVIGKFSTAGWTGYPPYSGAEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+L ++G+G+ ++GIN + TIIK RAP M+LM MP+FTWT LCT++L+  AFP LT
Sbjct: 187 DYWIWALLVSGVGSTMTGINFVVTIIKCRAPKMRLMQMPLFTWTTLCTSLLMAFAFPALT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            V  +  LDR +G HFFTND GGN+M Y NLIWIWGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 247 VVAAMLGLDRILGFHFFTNDSGGNMMNYANLIWIWGHPEVYILILPAFGVFSEVVATFSQ 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+VYAT VIT+LS+ VWLHHFFTMGS  NVNA FGI TMII++PTG KIF+W+
Sbjct: 307 KRLFGYKSLVYATAVITVLSFSVWLHHFFTMGSSPNVNAVFGIVTMIIAVPTGVKIFDWV 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +L+TIGF++TFV+GG++GV+LA+P A+FL+HNS FLVAHFHNV+I G
Sbjct: 367 FTMYKGRIIFHPAMLFTIGFLVTFVLGGVSGVLLAIPPADFLMHNSTFLVAHFHNVLIPG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG  +G  YWFPKA G+KL+  WG  SFWFW+IGFY+AFMPLY LGFMG++RRM  ++
Sbjct: 427 AVFGYFAGFQYWFPKATGFKLDEKWGARSFWFWIIGFYLAFMPLYALGFMGMSRRMERYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q +  +AA G L + +GI+   +QL VS R R    DITGDP+NGRTLEW T+SPP
Sbjct: 487 VAEWQPFLIVAAIGALSVLIGIVCQGMQLYVSIRDREKNRDITGDPYNGRTLEWQTASPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D++W MK+    + P   ++DI +P+NT IG+ +     ++GFA+ 
Sbjct: 547 AEYNFAKIPDIQDIDAFWDMKQRGVAYAPAKDYEDIHLPRNTGIGVFLGGLGFLIGFAVT 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++W L  + F+  L  +I  +        I + EI   EK RI+
Sbjct: 607 WYIWWLVALGFLGVLACLITRSSQDHTYQIIPAAEIEAYEKARIK 651


>gi|319778052|ref|YP_004134482.1| cytochrome o ubiquinol oxidase, subunit i [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317171771|gb|ADV15308.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 669

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/586 (58%), Positives = 441/586 (75%), Gaps = 5/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     GYLPPEHY+QIF+AHG IMIFF AMP + G++NF V
Sbjct: 70  MLLRGFIDAIMMRTQQVLAIHGP-GYLPPEHYDQIFSAHGTIMIFFAAMPFMIGLMNFAV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++SFW+T+ GA+LV ISL IGEFA TGWL Y PLS    SPGVGV
Sbjct: 129 PLQLGIRDVAFPTLNSVSFWLTASGALLVNISLVIGEFARTGWLPYAPLSETTYSPGVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WS+QI+G+GTLL+G+N++ TI+KMRAPGM  + MP+F WT+L +N+LIVAAFP+LT
Sbjct: 189 DYYLWSIQISGVGTLLTGVNLVTTILKMRAPGMGYLRMPMFCWTSLASNLLIVAAFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+ GGN MM+VNLIW WGHPEVYILVLP FGIFSEV STFSS
Sbjct: 249 ATLAMLTLDRYLGFHFFTNEAGGNQMMFVNLIWAWGHPEVYILVLPAFGIFSEVFSTFSS 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+GA+VNA FGI T +I++ TG KI+NWL
Sbjct: 309 KPLFGYRSMVAATMFICIVSFMVWLHHFFTMGAGADVNAAFGIATSVIAVGTGVKIYNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF+ P+LW +GF+ TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVII G
Sbjct: 369 FTMYGGRIRFDTPMLWALGFVTTFTVGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIISG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L   WGK +FW  L G+ + F+PLYI+G +G+TRR+ H +
Sbjct: 429 VLFGAFAGFTYWFPKAFGFRLHEGWGKAAFWVTLAGYMLVFVPLYIVGLLGMTRRLQHID 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +A FG L++  G    I+QL VS R R  L D TGDPW+GR+LEWSTSSPP
Sbjct: 489 MDLWAPWLVVAVFGVLVMIAGAALQIMQLAVSIRHRDKLRDETGDPWDGRSLEWSTSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKK--NNFKFP--KDKFQDILMPKNTNIGILISIFSLIMGF 536
           PV+N+A +P +   + +W +K+     K P  ++ ++ I MP+N+  G + + FS ++GF
Sbjct: 549 PVFNYARLPYVEDEEPYWRIKQRAREEKRPGAEEGYEPIEMPRNSPTGFVTAFFSTLIGF 608

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           AL+WH+W L I+ FI      +   +    +Y I +EE+  I+   
Sbjct: 609 ALIWHIWWLAIVGFIGAYATFVVFAWRDHGDYEIPAEEVARIDDDH 654


>gi|254472548|ref|ZP_05085947.1| cytochrome o ubiquinol oxidase, subunit I [Pseudovibrio sp. JE062]
 gi|211958012|gb|EEA93213.1| cytochrome o ubiquinol oxidase, subunit I [Pseudovibrio sp. JE062]
          Length = 665

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/585 (58%), Positives = 441/585 (75%), Gaps = 2/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++  +  GYL PEH++Q+F++HG IMIFF+AMP +TG+IN +V
Sbjct: 68  MLVRGFVDALMMRSQQAMALNND-GYLAPEHFDQVFSSHGTIMIFFMAMPFLTGLINIVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFPF+N++S W+T+ GA LVM+SL IG+F++ GW GYPP SG   SPGVGV
Sbjct: 127 PQQIGARDVAFPFMNSISLWLTAAGAALVMVSLVIGKFSTAGWTGYPPYSGAEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+L ++G+G+ ++GIN + TIIK RAP M+LM MP+FTWT LCT++L+  AFP LT
Sbjct: 187 DYWIWALLVSGVGSTMTGINFVVTIIKCRAPKMRLMQMPLFTWTTLCTSLLMAFAFPALT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            V  +  LDR +G HFFTND GGN+M Y NLIWIWGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 247 VVAAMLGLDRILGFHFFTNDSGGNMMNYANLIWIWGHPEVYILILPAFGVFSEVVATFSQ 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+VYAT VIT+LS+ VWLHHFFTMGS  NVNA FGI TMII++PTG KIF+W+
Sbjct: 307 KRLFGYKSLVYATAVITVLSFSVWLHHFFTMGSSPNVNAVFGIVTMIIAVPTGVKIFDWV 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +L+TIGF++TFV+GG++GV+LA+P A+FL+HNS FLVAHFHNV+I G
Sbjct: 367 FTMYKGRIIFHPAMLFTIGFLVTFVLGGVSGVLLAIPPADFLMHNSTFLVAHFHNVLIPG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG  +G  YWFPKA G+KL+  WG  SFWFW+IGFY+AFMPLY LGFMG++RRM  ++
Sbjct: 427 AVFGYFAGFQYWFPKATGFKLDEKWGARSFWFWIIGFYLAFMPLYALGFMGMSRRMERYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q +  +AA G L + +GI+   +QL VS R R    DITGDP+NGRTLEW T+SPP
Sbjct: 487 VAEWQPFLIVAAVGALSVLIGIVCQGMQLYVSIRDREKNRDITGDPYNGRTLEWQTASPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP I   D++W MK+    + P   ++DI +P+NT IG+ +     ++GFA+ 
Sbjct: 547 AEYNFAKIPDIQDIDAFWDMKQRGVAYAPAKGYEDIHLPRNTGIGVFLGGLGFLIGFAVT 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++W L  + F+  L  +I  +        I + EI   EK RI+
Sbjct: 607 WYIWWLVALGFLGVLACLITRSSQDHTYQIIPAAEIEAYEKARIK 651


>gi|70732359|ref|YP_262115.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas protegens
           Pf-5]
 gi|68346658|gb|AAY94264.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas protegens
           Pf-5]
          Length = 672

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/585 (58%), Positives = 445/585 (76%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N +V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMK+M+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKMMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRITSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A  G ++IA+GI   +IQL VS R R   + ++GDPWN  TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMVGAVMIAVGIACQLIQLYVSVRDRKQNMCVSGDPWNAHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P     D +   K+N   + +  ++Q I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVLPKAEGIDPFTEAKENGTAYAQPGRYQPIHMPNNTATGLVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           WH+W L I S   T+I    +     + Y +  E I  IE ++ +
Sbjct: 608 WHIWWLAIASLAGTVIYFAIHAARDDQGYMVPVETIERIEAEQHK 652


>gi|399009278|ref|ZP_10711718.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM17]
 gi|398112873|gb|EJM02726.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM17]
          Length = 672

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/583 (58%), Positives = 445/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMK+M+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKMMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRITSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R     ++GDPWN  TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAVMIAIGIACQLIQLYVSVRDRKQNQTVSGDPWNAHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P  +  D +   K+N   + K  +++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVLPKANGIDPFTEAKENGTAYQKPARYEPIHMPNNTATGLVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I S   T+I  + +     + Y +  + I  IE ++
Sbjct: 608 WHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVDVIERIEAEQ 650


>gi|389685754|ref|ZP_10177077.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas chlororaphis
           O6]
 gi|425901393|ref|ZP_18877984.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
 gi|388550096|gb|EIM13366.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas chlororaphis
           O6]
 gi|397883662|gb|EJL00149.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
          Length = 672

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/583 (58%), Positives = 445/583 (76%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMK+M+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKMMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y GR+R    +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYHGRLRITSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G +++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +     +  +A FG ++IA+GI   +IQL VS R R     ++GDPWN  TLEWSTSSPP
Sbjct: 488 NPEWVPYLYVAMFGAVMIAIGIACQLIQLYVSVRDRKQNQCVSGDPWNAHTLEWSTSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P  +  D +   K+N   + K  +++ I MP NT  G+++     + GFA++
Sbjct: 548 PFYNFAVLPKANGIDPFTEAKENGTAYQKPARYEPIHMPNNTATGLVMGALLTVFGFAMI 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+W L I S   T+I  + +     + Y +  + I  IE ++
Sbjct: 608 WHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVDVIERIEAEQ 650


>gi|238562366|ref|ZP_00440567.2| putative cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           mallei GB8 horse 4]
 gi|238522787|gb|EEP86229.1| putative cytochrome o ubiquinol oxidase, subunit I [Burkholderia
           mallei GB8 horse 4]
          Length = 560

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/541 (62%), Positives = 431/541 (79%), Gaps = 3/541 (0%)

Query: 43  MIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTG 102
           MIFF+AM L+ G+ N IVPLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TG
Sbjct: 1   MIFFMAMALLVGLFNLIVPLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTG 60

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           WL YPPLS +  SPGVGVDYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FT
Sbjct: 61  WLAYPPLSELQFSPGVGVDYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFT 120

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           WTALC+N+LI+A FP+LT  L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYI
Sbjct: 121 WTALCSNVLIMATFPILTVALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYI 180

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           LVLP FGI+SEV++TFS K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFG
Sbjct: 181 LVLPAFGIYSEVIATFSKKPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFG 240

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           I TM+I+IPTG KIFNWLFTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+
Sbjct: 241 IMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFV 300

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHN IIGGV+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+
Sbjct: 301 LHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFV 360

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LI 460
           PLY+LGFMG+TRR++H+++ +   W  +AA G  LIA+G+L  + Q+ V+ R R+     
Sbjct: 361 PLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGVALIALGVLHQVAQVWVAVRNRNAPGYR 420

Query: 461 DITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPK 519
           D TGDPWNGRTLEW+T+SPPPVYNFA IP +H  D   Y K++     K+  +QDI MP 
Sbjct: 421 DTTGDPWNGRTLEWATASPPPVYNFAVIPTVHALDELAYRKEHGIGVGKNAVYQDIHMPS 480

Query: 520 NTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           NT+ G+ + +FSL++GFALVWH+W L I SF+  + +V+  +      YYI+++ +  IE
Sbjct: 481 NTSAGLFVGMFSLVLGFALVWHIWWLAIASFVGIVAMVVLYSAGENDGYYIAADTVREIE 540

Query: 580 K 580
           +
Sbjct: 541 E 541


>gi|295698390|ref|YP_003603045.1| Cytochrome o ubiquinol oxidase, subunit I [Candidatus Riesia
           pediculicola USDA]
 gi|291157497|gb|ADD79942.1| Cytochrome o ubiquinol oxidase, subunit I [Candidatus Riesia
           pediculicola USDA]
          Length = 671

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/589 (59%), Positives = 444/589 (75%), Gaps = 11/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAIS---FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIIN 57
           MLFRGFTDA++MR QQ I+   F    G+L  +HYNQIFTAHGVIMIFF+AMPLV G++N
Sbjct: 68  MLFRGFTDAILMRTQQTIASTNFLGGNGFLSSDHYNQIFTAHGVIMIFFMAMPLVIGLMN 127

Query: 58  FIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPG 117
            IVPLQIG+RDVAFP LN++SFW+     IL+ +S FIGEFA TGWL YPPLS    SP 
Sbjct: 128 IIVPLQIGSRDVAFPRLNSISFWIFLSSVILMNLSFFIGEFAKTGWLAYPPLSEKNYSPD 187

Query: 118 VGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFP 177
           VGVDY+IWSLQIAG+ T L+GIN+I TI+KMRA GM +M +P+FTWT LC+NILIVA+FP
Sbjct: 188 VGVDYWIWSLQIAGVSTTLNGINLITTILKMRAEGMSMMKIPVFTWTVLCSNILIVASFP 247

Query: 178 VLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVST 237
           +LTS + L ++DRY+G HFFTND GGN+M+Y+NLIW WGHPEVYIL+LP FGIFSEV ST
Sbjct: 248 ILTSTIALLSMDRYLGAHFFTNDGGGNMMLYINLIWAWGHPEVYILILPAFGIFSEVTST 307

Query: 238 FSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIF 297
           F  K +FGY S+V ATV IT++S++VWLHHFFTMGSGA VN+ FGI TMII+IPTG K+F
Sbjct: 308 FCRKSIFGYQSLVLATVAITVMSFMVWLHHFFTMGSGAKVNSIFGIATMIIAIPTGVKMF 367

Query: 298 NWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVI 357
           NWLFTM++G I F  P+LWT+GF+ITF +GG AGV+L++P+ANF LHNSLFLVAHFHNVI
Sbjct: 368 NWLFTMFKGNISFRSPMLWTLGFIITFTVGGAAGVLLSIPSANFFLHNSLFLVAHFHNVI 427

Query: 358 IGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMS 417
           IGGV+FG  SGI YWFPK FG+ L    G  SF  W+IGF +AF+PLY LG  G+TRR+S
Sbjct: 428 IGGVVFGCFSGITYWFPKVFGFLLNEKIGILSFSLWIIGFLLAFVPLYFLGLDGMTRRLS 487

Query: 418 HFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTS 477
              +    +   +A FGT++IA+GIL  IIQ+I S   ++  +D+TGDPWNGRTLEWS  
Sbjct: 488 QHINPRYHLLLSVACFGTIIIAIGILCQIIQVIYSCLNKN--MDVTGDPWNGRTLEWSIR 545

Query: 478 SPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK------FQDILMPKNTNIGILISIFS 531
           SP PVYNFAF+P +   D WW +KK+  +  + K      ++ I +P  +  GILI    
Sbjct: 546 SPAPVYNFAFLPKVKSRDDWWEIKKSRKRMQEMKKRRSKGYRSICLPNRSFSGILIGFSC 605

Query: 532 LIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LI GF++VW++W + I    + L+  I++    ++  YI S+++  IE+
Sbjct: 606 LIFGFSMVWYIWWMAIFGMSLILVFSIHSFLTKEKMVYIDSKDVQRIEE 654


>gi|330811631|ref|YP_004356093.1| cytochrome o subunit I [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|423699187|ref|ZP_17673677.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           Q8r1-96]
 gi|327379739|gb|AEA71089.1| Cytochrome o subunit I [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|387996890|gb|EIK58220.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           Q8r1-96]
          Length = 676

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/587 (58%), Positives = 448/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVVKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   ++WT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSHVMWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWITGFFVAFMPLYVLGFMGMTRRLNTTT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCDHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   +P   K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADVIDPFTEAKENGTAYPVPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S + T++    +     + Y +  + I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLVGTVVYFAIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398903217|ref|ZP_10651527.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM50]
 gi|398177412|gb|EJM65093.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM50]
          Length = 676

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/588 (58%), Positives = 449/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWITGFFVAFMPLYVLGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAFGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKAETIDPFTEAKENGTAYKAPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I+S + T+   + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIVSLVGTVGYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|433773892|ref|YP_007304359.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium
           australicum WSM2073]
 gi|433665907|gb|AGB44983.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium
           australicum WSM2073]
          Length = 667

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/585 (57%), Positives = 442/585 (75%), Gaps = 5/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++     GYLPPEHY+QIF+AHG IMIFF AMP + G++NF+V
Sbjct: 68  MLLRGFIDAIMMRTQQVLAIHGP-GYLPPEHYDQIFSAHGTIMIFFAAMPFIIGLMNFVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++SFW+T+ GA+LV ISL IGEFA TGWL Y PLS    SPGVGV
Sbjct: 127 PLQLGIRDVAFPTLNSVSFWLTATGALLVNISLVIGEFARTGWLPYAPLSETTYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+WS+QI+G+GTLL+G+N++ TI+KMRAPGM  + MP+F WT+L +N+LIVAAFP+LT
Sbjct: 187 DYYLWSIQISGVGTLLTGVNLVTTILKMRAPGMGYLRMPMFCWTSLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+ GGN MM+VNLIW WGHPEVYILVLP FGIFSE+ STFSS
Sbjct: 247 ATLAMLTLDRYLGFHFFTNEAGGNQMMFVNLIWAWGHPEVYILVLPAFGIFSEIFSTFSS 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+GA+VNA FGI T +I++ TG KI+NWL
Sbjct: 307 KPLFGYRSMVAATMFICIVSFMVWLHHFFTMGAGADVNAAFGIATSVIAVGTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GR+RF+ P+LW + F+ TF +GGM GV+LAVP A+F+LHNSLFLVAHFHNVII G
Sbjct: 367 FTMYGGRVRFDTPMLWALAFVTTFTVGGMTGVLLAVPPADFVLHNSLFLVAHFHNVIISG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L   WGK +FW  L+G+ + F+PLYI+G +G+TRR+ H +
Sbjct: 427 VLFGAFAGFTYWFPKAFGFRLHEGWGKAAFWVTLVGYMLVFVPLYIVGLLGMTRRLQHID 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  +AAFG L++ +G    I+QL+VS R R  L D TGDPW+GR+LEWST SPP
Sbjct: 487 MDLWAPWLVVAAFGVLVMIIGAALQIMQLVVSIRHRDKLRDETGDPWDGRSLEWSTPSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP----KDKFQDILMPKNTNIGILISIFSLIMGF 536
           P +NFA +P +   + +W +K+   +      +  ++ I MP+N+  G + + FS ++GF
Sbjct: 547 PAFNFARLPHVENEEPYWTIKQRGIEEQGAETEAAYEPIEMPRNSPTGFVTAFFSTLIGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           AL+WH+W L I+ FI      +   +    +Y I ++E+  I++ 
Sbjct: 607 ALIWHIWWLAIVGFIGAYATFVVFAWRDHGDYEIPADEVARIDRN 651


>gi|398927963|ref|ZP_10663186.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM48]
 gi|398169278|gb|EJM57267.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM48]
          Length = 676

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADVVDPFTEAKENGTAYKAPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I     T+I  + +     + YY+  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIAGLAGTVIYFVIHAARDDQGYYVPVDVIERIEAEQHK 654


>gi|398880798|ref|ZP_10635820.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM67]
 gi|398882144|ref|ZP_10637114.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM60]
 gi|398191447|gb|EJM78639.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM67]
 gi|398199393|gb|EJM86335.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM60]
          Length = 676

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMIYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWITGFFVAFMPLYVLGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKAETIDPFTEAKENGTAYKAPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L     I T++  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAAFGLIGTVVYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|121600667|ref|YP_993718.1| ubiquinol oxidase subunit 1 [Burkholderia mallei SAVP1]
 gi|124385811|ref|YP_001028824.1| ubiquinol oxidase, subunit I [Burkholderia mallei NCTC 10229]
 gi|167001104|ref|ZP_02266905.1| ubiquinol oxidase, subunit I [Burkholderia mallei PRL-20]
 gi|121229477|gb|ABM51995.1| ubiquinol oxidase subunit 1 (Ubiquinol oxidasepolypeptide I)
           (Cytochrome A1 subunit 1) (Oxidase BA(3) subunit 1)
           [Burkholderia mallei SAVP1]
 gi|243063055|gb|EES45241.1| ubiquinol oxidase, subunit I [Burkholderia mallei PRL-20]
          Length = 560

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/541 (62%), Positives = 431/541 (79%), Gaps = 3/541 (0%)

Query: 43  MIFFVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTG 102
           MIFF+AM L+ G+ N IVPLQIGARDVAFPFLN+LSFWMT+  A+L+ +SL +GEFA TG
Sbjct: 1   MIFFMAMALLVGLFNLIVPLQIGARDVAFPFLNSLSFWMTAVAALLMNVSLVVGEFAQTG 60

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           WL YPPLS +  SPGVGVDYY+W+LQI+G+GTL++ IN   TII+MRAPGM LM MP+FT
Sbjct: 61  WLAYPPLSELQFSPGVGVDYYLWALQISGVGTLITAINFFVTIIRMRAPGMTLMKMPVFT 120

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           WTALC+N+LI+A FP+LT  L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYI
Sbjct: 121 WTALCSNVLIMATFPILTVALALLALDRYLGMHFFTNDAGGNAMVYLNLIWAWGHPEVYI 180

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           LVLP FGI+SEV++TFS K LFGY +MVYA+ VI +L+++VWLHHFFTMGSGANVNAFFG
Sbjct: 181 LVLPAFGIYSEVIATFSKKPLFGYKTMVYASCVIMVLAFLVWLHHFFTMGSGANVNAFFG 240

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           I TM+I+IPTG KIFNWLFTMYRGRI F  P+LWTIGFM+TF +GGM GV++A+P A+F+
Sbjct: 241 IMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPVLWTIGFMVTFTLGGMTGVMMAIPGADFV 300

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHN IIGGV+FG ++G +YWFPKAFG+KL+   GK +FW W IGFYV+F+
Sbjct: 301 LHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFPKAFGFKLDEKLGKRAFWCWFIGFYVSFV 360

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHT--LI 460
           PLY+LGFMG+TRR++H+++ +   W  +AA G  LIA+G+L  + Q+ V+ R R+     
Sbjct: 361 PLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGVALIALGVLHQVAQVWVAVRNRNAPGYR 420

Query: 461 DITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPK 519
           D TGDPW+GRTLEW+T+SPPPVYNFA IP +H  D   Y K++     K+  +QDI MP 
Sbjct: 421 DTTGDPWDGRTLEWATASPPPVYNFAVIPTVHALDELAYRKEHGIGVGKNAVYQDIHMPS 480

Query: 520 NTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           NT+ G+ + +FSL++GFALVWH+W L I SF+  + +V+  +      YYI+++ +  IE
Sbjct: 481 NTSAGLFVGMFSLVLGFALVWHIWWLAIASFVGIVAMVVLYSAGENDGYYIAADTVREIE 540

Query: 580 K 580
           +
Sbjct: 541 E 541


>gi|27904895|ref|NP_778021.1| ubiquinol oxidase polypeptide I [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395810|sp|Q89AA4.1|CYOB_BUCBP RecName: Full=Ubiquinol oxidase subunit 1; AltName: Full=Cytochrome
           o subunit 1; AltName: Full=Cytochrome o ubiquinol
           oxidase subunit 1; AltName: Full=Oxidase BO(3) subunit
           1; AltName: Full=Ubiquinol oxidase polypeptide I
 gi|27904293|gb|AAO27126.1| ubiquinol oxidase polypeptide I [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 659

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/575 (64%), Positives = 449/575 (78%), Gaps = 10/575 (1%)

Query: 1   MLFRGFTDAVMMRLQQ---AISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIIN 57
           MLFRGF DA+MMR+QQ   +   G+  G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N
Sbjct: 68  MLFRGFADAIMMRMQQFLVSSYHGNGTGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMN 127

Query: 58  FIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPG 117
           F+VPLQIG+RDVAFPFLNNLS W+T   A+L+ +SL IGEFA TGWL YPPLS +  SPG
Sbjct: 128 FVVPLQIGSRDVAFPFLNNLSLWLTIFSALLMNVSLGIGEFAQTGWLAYPPLSELQYSPG 187

Query: 118 VGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFP 177
           VGVDY+IWSLQI+GIGT L+ IN + TIIKMR+ GM    +P+FTWT+ CTNILI+A+FP
Sbjct: 188 VGVDYWIWSLQISGIGTTLTAINFLVTIIKMRSSGMNWFKIPVFTWTSFCTNILIIASFP 247

Query: 178 VLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVST 237
           VLT  L L TLDRY+G HFFTND GGN+MMYVNLIWIWGHPEVYIL+LPVFGIFSEVV+T
Sbjct: 248 VLTVSLLLLTLDRYLGFHFFTNDFGGNMMMYVNLIWIWGHPEVYILILPVFGIFSEVVAT 307

Query: 238 FSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIF 297
           FSSK LFGY+S+++AT+VIT+LS+IVWLHHFFTMG+ ANVNAFFGITTMIISIPTG KIF
Sbjct: 308 FSSKELFGYTSLIWATIVITILSFIVWLHHFFTMGASANVNAFFGITTMIISIPTGVKIF 367

Query: 298 NWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVI 357
           NWLFTMYRG +R    +LWTIGF+ITF IGGMAGV+L++P  +F LHNSLFLVAHFHNVI
Sbjct: 368 NWLFTMYRGNVRINSIMLWTIGFLITFSIGGMAGVLLSLPVIDFSLHNSLFLVAHFHNVI 427

Query: 358 IGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMS 417
           IGGV+FG  +GI YWFPK FG+ L   WGK +FW W  GF+ AFMPLY LG MG+TRR+S
Sbjct: 428 IGGVVFGCFAGITYWFPKLFGFMLSEKWGKRAFWCWFFGFFCAFMPLYALGLMGMTRRLS 487

Query: 418 HFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTS 477
              +        IAA GT+LI +GI+  IIQ+ VS R R+   D +GDPWNGRTLEWST+
Sbjct: 488 QNINPQFHSMLTIAALGTILIFIGIVFQIIQIFVSIRDRNLNRDCSGDPWNGRTLEWSTT 547

Query: 478 SPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK----FQDILMPKNTNIGILISIFSLI 533
           SPPP YNFA +P++   DS+W  KK+   F  +K    +    MPKNT  G LI  F+ +
Sbjct: 548 SPPPFYNFAVLPIVQFRDSFWESKKS---FKSNKLPILYTSFHMPKNTKFGFLIGFFAFL 604

Query: 534 MGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNY 568
           +GF+ VW+++ L  ISF + + +++  + +   +Y
Sbjct: 605 LGFSAVWYIFWLFFISFFVIIYLLVIKSLDTNCDY 639


>gi|423093626|ref|ZP_17081422.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           Q2-87]
 gi|397887565|gb|EJL04048.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           Q2-87]
          Length = 676

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/587 (58%), Positives = 447/587 (76%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVVKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   ++WT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVMWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWITGFFVAFMPLYVLGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   +    K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADVIDPFTEAKENGTAYQAPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S + T++    +     + Y +  + I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLVGTVVYFAIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|426407765|ref|YP_007027864.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. UW4]
 gi|426265982|gb|AFY18059.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. UW4]
          Length = 676

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K+Q I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYKAPA-KYQPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398853596|ref|ZP_10610195.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM80]
 gi|398239431|gb|EJN25142.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM80]
          Length = 676

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/587 (58%), Positives = 445/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAAGIACQLIQLYVSVRDRNKPENVCDHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   + +  K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYQQPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S   T+I  + +     + Y +  E I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVETIERIEAEQHK 654


>gi|398989236|ref|ZP_10692632.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM24]
 gi|399015221|ref|ZP_10717497.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM16]
 gi|398109232|gb|EJL99171.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM16]
 gi|398148156|gb|EJM36843.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM24]
          Length = 676

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/587 (58%), Positives = 446/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENVCDHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   + +  K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYQRPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S   T+I  + +     + Y +  E I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVETIERIEAEQHK 654


>gi|333982994|ref|YP_004512204.1| cytochrome o ubiquinol oxidase subunit I [Methylomonas methanica
           MC09]
 gi|333807035|gb|AEF99704.1| cytochrome o ubiquinol oxidase, subunit I [Methylomonas methanica
           MC09]
          Length = 671

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/583 (56%), Positives = 436/583 (74%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++ G++ G+L P HY+QIFTAHG IMI F+AMP +TG++N ++
Sbjct: 68  MLLRGFADAIMMRAQQWLAEGANQGFLTPNHYDQIFTAHGTIMIIFMAMPFLTGLMNIVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFPFLN LS W+T  GA+L+M+SL +GEF++ GW GYPP S +  SPG GV
Sbjct: 128 PLQLGKRDVAFPFLNALSLWLTVAGAMLIMVSLAVGEFSTAGWTGYPPYSELQYSPGEGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+L ++G  + ++GIN + T++  RAPGM LM MP+F WTALCT+IL+  AFP LT
Sbjct: 188 DYWIWALMLSGAASTMTGINFLVTVLFERAPGMTLMRMPLFCWTALCTSILMTLAFPALT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDRY+G HFFTN  GGN+M +VNL WIWGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 VATVLLGLDRYLGMHFFTNGNGGNMMNFVNLFWIWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+VYAT+VI LLS+ VWLHHFFTMG+ A VNA FGI TM+I++PTG KIF+WL
Sbjct: 308 KRLFGYRSLVYATLVIALLSFTVWLHHFFTMGASAGVNAAFGIATMVIAVPTGVKIFDWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TMYRGRIRF VP+LW + F+ +F IGG  GV+LAVP  +F++HNS FLVAHFHN++I G
Sbjct: 368 LTMYRGRIRFNVPMLWALAFLPSFAIGGATGVLLAVPPVDFMMHNSEFLVAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG ++G +YWFPKAFG++L+  WGK +FW WL+GFY+AFMPLY+LG MG+ RRM H++
Sbjct: 428 ALFGYLAGYSYWFPKAFGFRLDEKWGKLAFWNWLMGFYLAFMPLYVLGLMGMPRRMEHYD 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   Q    +AA G   I +GI    IQL VS + R   +D  GDPWNGR+LEW+ +SPP
Sbjct: 488 NPEWQPLLMVAAAGAFFIFLGIGCLAIQLWVSIKNREANLDTLGDPWNGRSLEWAIASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALV 539
           PVYNFA IP ++  D++W +K  N    +  ++QDI +P+N+++GI+    + + GFA+V
Sbjct: 548 PVYNFAVIPEVNSIDAFWRIKPENIATKQAIQYQDIDLPRNSSVGIVFGACAFVFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           WH+  L + + +  L  +I  +F+    Y +++ E+  IE+ R
Sbjct: 608 WHIGWLAVAAGLAMLSAIILRSFDDATEYRLTAAEVEQIERGR 650


>gi|399004036|ref|ZP_10706671.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM18]
 gi|398120538|gb|EJM10195.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM18]
          Length = 676

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   ++WT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVMWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYVLGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADVVDPFTEAKENGTAYKAPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I     T+I    +     + YY+  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIAGLAGTVIYFAIHAARDDQGYYVPVDVIERIEAEQHK 654


>gi|77460868|ref|YP_350375.1| cytochrome-c oxidase [Pseudomonas fluorescens Pf0-1]
 gi|398978363|ref|ZP_10687738.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM25]
 gi|77384871|gb|ABA76384.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Pseudomonas
           fluorescens Pf0-1]
 gi|398137163|gb|EJM26229.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM25]
          Length = 676

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/588 (58%), Positives = 447/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYKAPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I  + +     + Y +  E I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVETIERIEAEQHK 654


>gi|398997547|ref|ZP_10700370.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM21]
 gi|398123945|gb|EJM13473.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM21]
          Length = 676

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY+LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWITGFFVAFMPLYVLGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   +I   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENICDHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  +++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYKAPA-RYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398891950|ref|ZP_10645197.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM55]
 gi|398918372|ref|ZP_10658459.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM49]
 gi|398171427|gb|EJM59330.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM49]
 gi|398186154|gb|EJM73536.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM55]
          Length = 676

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/588 (58%), Positives = 447/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADVVDPFTEAKENGTAYKVPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I    +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFAIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398937735|ref|ZP_10667401.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp.
           GM41(2012)]
 gi|398166503|gb|EJM54597.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp.
           GM41(2012)]
          Length = 676

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 447/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KRLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAAGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  +++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADTIDPFTEAKENGTAYKAPA-RYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I+  + T+   + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIVGLVGTVGYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398838482|ref|ZP_10595758.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM102]
 gi|398115858|gb|EJM05632.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM102]
          Length = 676

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R    ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSIRDRKLPQNMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  +++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKAETIDPFTEAKENGTAYKAPA-RYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S + T++  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLVGTVVYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398948304|ref|ZP_10672718.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM33]
 gi|398160958|gb|EJM49209.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM33]
          Length = 676

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/588 (58%), Positives = 447/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADVVDPFTEAKENGTAYKVPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I    +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFAIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398969839|ref|ZP_10683082.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM30]
 gi|398141351|gb|EJM30275.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM30]
          Length = 675

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/587 (58%), Positives = 445/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   +    K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYQAPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S   T+I  + +     + Y +  E I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVETIERIEAEQHK 654


>gi|398870196|ref|ZP_10625544.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM74]
 gi|398209240|gb|EJM95919.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM74]
          Length = 676

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SMVYA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMVYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  +++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADVVDPFTEAKENGTAYKAPA-RYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|407363709|ref|ZP_11110241.1| cytochrome o ubiquinol oxidase subunit I [Pseudomonas mandelii
           JR-1]
          Length = 676

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/588 (58%), Positives = 447/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGANVNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   ++ P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYRAPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S   T+I  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|398866371|ref|ZP_10621867.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM78]
 gi|398241040|gb|EJN26702.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM78]
          Length = 676

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/588 (58%), Positives = 446/588 (75%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FG+FSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHKSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R    ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRKKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  K++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKADCVDPFTEAKENGTAYKVPA-KYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L I S + T++    +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAIASLVGTVVYFAIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|424924792|ref|ZP_18348153.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           R124]
 gi|404305952|gb|EJZ59914.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas fluorescens
           R124]
          Length = 675

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/587 (58%), Positives = 445/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   ++WT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVMWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFGFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   +    K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYQAPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S   T+I  + +     + Y +  E I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLAGTVIYFVIHAARDDQGYMVPVETIERIEAEQHK 654


>gi|398858469|ref|ZP_10614158.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM79]
 gi|398238928|gb|EJN24647.1| cytochrome o ubiquinol oxidase, subunit I [Pseudomonas sp. GM79]
          Length = 676

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/588 (57%), Positives = 448/588 (76%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STF+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISILGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R    ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSIRDRKLPQNMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           PPP YNFA +P     D +   K+N   +K P  +++ I MP NT  G+++     + GF
Sbjct: 548 PPPFYNFAVLPKAETIDPFTEAKENGTAYKAPA-RYEPIHMPNNTATGVVMGALLTVFGF 606

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           A++WH+W L + S + T++  + +     + Y +  + I  IE ++ +
Sbjct: 607 AMIWHIWWLAVASLVGTVVYFVIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|213417282|ref|ZP_03350426.1| cytochrome o ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 551

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/538 (63%), Positives = 430/538 (79%), Gaps = 1/538 (0%)

Query: 46  FVAMPLVTGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLG 105
           FVAMP V G++N +VPLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL 
Sbjct: 1   FVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLA 60

Query: 106 YPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTA 165
           YPPLSGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +
Sbjct: 61  YPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWAS 120

Query: 166 LCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVL 225
           LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+L
Sbjct: 121 LCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILIL 180

Query: 226 PVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITT 285
           PVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITT
Sbjct: 181 PVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITT 240

Query: 286 MIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHN 345
           MII+IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHN
Sbjct: 241 MIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHN 300

Query: 346 SLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLY 405
           SLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY
Sbjct: 301 SLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLY 360

Query: 406 ILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGD 465
           +LGFMG+TRR+S   D        +AA G  LIA+GIL  +IQ+ VS R R    D+TGD
Sbjct: 361 VLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGD 420

Query: 466 PWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIG 524
           PW GRTLEWSTSSPPP YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  G
Sbjct: 421 PWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAG 480

Query: 525 ILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           I+I+ F+ + GFA++WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 481 IVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 538


>gi|71730390|gb|EAO32472.1| Cytochrome-c oxidase [Xylella fastidiosa Ann-1]
          Length = 622

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/529 (65%), Positives = 419/529 (79%), Gaps = 1/529 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+ MR Q AI+   + G  PP HY+QIFTAHGVIMIFF+AMPL+TG++N IV
Sbjct: 67  MLLRGFADAIFMRTQLAIAHSGNEGIFPPHHYDQIFTAHGVIMIFFMAMPLMTGLLNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+  GGA L+ ISL +GEFA TGWL YPPLS +  SPGVGV
Sbjct: 127 PLQIGARDVAYPFLNSLSFWLFVGGAALINISLAVGEFAQTGWLAYPPLSELEYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+LQI+G+GTLL+GIN + TI++MRAPGM LM MP+FTWTAL TNILI+AAFP+LT
Sbjct: 187 DYYLWALQISGLGTLLTGINFLVTIMRMRAPGMTLMRMPVFTWTALITNILIIAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L   DRY+GTHFFTND GGN MMYVNLIWIWGHPEVYIL LP FGI+SE+V+T+  
Sbjct: 247 VTLALLGADRYLGTHFFTNDGGGNAMMYVNLIWIWGHPEVYILALPAFGIYSELVATYCR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY+SMVYAT  I +LS+IVWLHHFFTMGSGANVNAFFGITTMIISIPTG KIFNWL
Sbjct: 307 KKLFGYTSMVYATSCIGVLSFIVWLHHFFTMGSGANVNAFFGITTMIISIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGR+ F  P+ WTIGFMITF IGGM GV+LA+PA +F+LHNSLFL+AHFHN IIG 
Sbjct: 367 FTMYRGRVHFSAPMWWTIGFMITFTIGGMTGVMLAIPAVDFVLHNSLFLIAHFHNTIIGA 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G+ YWFPKAFG+KL    GK SF  W++GF+VAFMPLY LGFMG+TRR++ + 
Sbjct: 427 AVFGYLAGMTYWFPKAFGFKLNETLGKASFACWIVGFFVAFMPLYALGFMGMTRRLNSYN 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +   + W  +AA G ++I +GI   ++Q   S        D+TGDPW+GRTLEWSTSSPP
Sbjct: 487 NPQWEPWLLVAAGGAVIIGIGIFLNLVQFAYSLWTHKQNRDLTGDPWDGRTLEWSTSSPP 546

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILIS 528
           P YNFA +P +   D +W  K+    + K DK++DI MP+NT  G  I 
Sbjct: 547 PFYNFAHVPHVDSLDQFWEDKQRGKAWKKPDKYEDIHMPRNTAAGFWIG 595


>gi|354594363|ref|ZP_09012402.1| cytochrome o ubiquinol oxidase subunit I [Commensalibacter
           intestini A911]
 gi|353672039|gb|EHD13739.1| cytochrome o ubiquinol oxidase subunit I [Commensalibacter
           intestini A911]
          Length = 645

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/588 (58%), Positives = 446/588 (75%), Gaps = 5/588 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA+MMR QQAI+F S  GYLPP HY+QIFTAHG IMIFF+AM  + G+ N IV
Sbjct: 51  MLFRGFCDALMMRTQQAIAFDSP-GYLPPHHYDQIFTAHGTIMIFFMAMAFMQGLFNLIV 109

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+T+ GAILV ISLFIGEF++ GWL YPP+S +  SPGVGV
Sbjct: 110 PLQIGARDVAFPFLNSLSFWLTTAGAILVNISLFIGEFSTAGWLAYPPVSELQFSPGVGV 169

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+GIGT+L+ +N + TI KMRAPGM  M MP+FTWT   + I+I   FP LT
Sbjct: 170 DYYIWAVQISGIGTVLTAVNFLTTICKMRAPGMTWMRMPVFTWTVFASCIMIFTTFPALT 229

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             +   TLDRY+G HFFTND GGN+M+Y+NLIW WGHPEVYILV+P FG FSE+V  F  
Sbjct: 230 VSIAELTLDRYLGMHFFTNDGGGNVMLYLNLIWAWGHPEVYILVIPAFGCFSELVPVFCK 289

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MVYAT+ IT+LS +VW+HHFFTMG+GANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 290 KPLFGYATMVYATLTITVLSLLVWVHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFNWL 349

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F  P+ WTIGFMI FVIGGM GV+LA+PA++F+LHNS FL+AHFHN IIGG
Sbjct: 350 FTMYRGRIEFTAPMYWTIGFMIVFVIGGMTGVMLAIPASDFVLHNSEFLIAHFHNTIIGG 409

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+N+W PK  G+K+    GK +FWFW  GF+++F+PLYI GF G+ RR++H++
Sbjct: 410 VYFGYIAGMNFWAPKVTGFKMSQGLGKAAFWFWFFGFFLSFVPLYITGFDGMIRRLNHYD 469

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSS 478
           +    IW  IA  G   I +G++  ++QL +      +    D+TGD W+GRTLEWSTSS
Sbjct: 470 NPDWHIWLIIACIGAFCILIGVVCQLLQLFLGIWNMDKPGHKDVTGDLWDGRTLEWSTSS 529

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           P PVYNFA IP++   D++ Y K++  + +   + +QDI+MPKNT+ G  I + +L++GF
Sbjct: 530 PAPVYNFAHIPVVQARDAFAYDKEHGIDTRRTSEPYQDIIMPKNTSAGFWIGMLALVLGF 589

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
             VWH+W L +++ +I L+  +  +F   + + I + E+  IEK+  R
Sbjct: 590 GAVWHIWWLVVVAAVIILLTAVGYSFKEDKEFVIPAAEVERIEKEHSR 637


>gi|378952730|ref|YP_005210218.1| cytochrome O ubiquinol oxidase subunit I [Pseudomonas fluorescens
           F113]
 gi|359762744|gb|AEV64823.1| Cytochrome O ubiquinol oxidase subunit I [Pseudomonas fluorescens
           F113]
          Length = 676

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/587 (58%), Positives = 445/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVG+
Sbjct: 128 PLQIGARDVAYPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+STFS 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGAISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   +LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSHVLWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+KL   WGK +FWFW+ GF+VAFMPLY LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFKLHEGWGKAAFWFWISGFFVAFMPLYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENMCEHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+    +    K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADVIDPFTEAKEAGTAYQAPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S + T++    +     + Y +  + I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLVGTVVYFTIHAARDDQGYMVPVDVIERIEAEQHK 654


>gi|208780575|ref|ZP_03247914.1| cytochrome o ubiquinol oxidase subunit I [Francisella novicida FTG]
 gi|208743550|gb|EDZ89855.1| cytochrome o ubiquinol oxidase subunit I [Francisella novicida FTG]
          Length = 645

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/589 (59%), Positives = 443/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIFTAHGVIMIFFVAMPL+  ++N++V
Sbjct: 49  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFTAHGVIMIFFVAMPLIFALMNWVV 108

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 109 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 168

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 169 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 228

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 229 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 288

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 289 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 348

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 349 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 408

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 409 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 468

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 469 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 527

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 528 PVPFYNFSHDPVVEERDAYWDHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 587

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 588 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 636


>gi|118496810|ref|YP_897860.1| cytochrome bo terminal oxidase subunit I [Francisella novicida
           U112]
 gi|194324509|ref|ZP_03058281.1| cytochrome o ubiquinol oxidase subunit I [Francisella novicida FTE]
 gi|254373655|ref|ZP_04989139.1| hypothetical protein FTDG_01663 [Francisella novicida GA99-3548]
 gi|118422716|gb|ABK89106.1| cytochrome bo terminal oxidase subunit I [Francisella novicida
           U112]
 gi|151571377|gb|EDN37031.1| hypothetical protein FTDG_01663 [Francisella novicida GA99-3548]
 gi|194321344|gb|EDX18830.1| cytochrome o ubiquinol oxidase subunit I [Francisella tularensis
           subsp. novicida FTE]
          Length = 676

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/589 (59%), Positives = 443/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIFTAHGVIMIFFVAMPL+  ++N++V
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFTAHGVIMIFFVAMPLIFALMNWVV 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEERDAYWDHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|385792126|ref|YP_005825102.1| hypothetical protein [Francisella cf. novicida Fx1]
 gi|328676272|gb|AEB27142.1| Cytochrome O ubiquinol oxidase subunit I [Francisella cf. novicida
           Fx1]
          Length = 676

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/589 (59%), Positives = 444/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIFTAHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFTAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+++WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLSFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEERDAYWDHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|254368563|ref|ZP_04984579.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica FSC022]
 gi|157121466|gb|EDO65657.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica FSC022]
          Length = 676

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/589 (59%), Positives = 445/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKF---PKD---KFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+        P D   K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEKRDAYWDHKQKGLNVDNTPVDSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|301058573|ref|ZP_07199578.1| cytochrome o ubiquinol oxidase, subunit I [delta proteobacterium
           NaphS2]
 gi|300447305|gb|EFK11065.1| cytochrome o ubiquinol oxidase, subunit I [delta proteobacterium
           NaphS2]
          Length = 687

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/583 (57%), Positives = 440/583 (75%), Gaps = 1/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DAVMMR QQA++ G+S GYLPP H++Q+F+AHG IMI F+AMP   G++N  V
Sbjct: 68  MLLRGFSDAVMMRSQQALAAGASHGYLPPHHFDQVFSAHGTIMIIFMAMPFFIGLMNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVA+PFLN++S WMT+ GA+LVM+SL +GEF+ TGW G  PL     SPG GV
Sbjct: 128 PPQIGARDVAYPFLNSVSLWMTTAGAVLVMVSLGVGEFSQTGWFGIAPLFETEYSPGTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+ QIAG G+L++GIN + TI KMRAPGMKLM MP+F WT L +N+L+V +FPVLT
Sbjct: 188 DYWLWAFQIAGAGSLMTGINFLVTIFKMRAPGMKLMRMPLFVWTCLTSNVLMVLSFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
              FL  LDRY+G HFFTN LGGN+MM+ NL W+WGHPEVYIL+LP FGIFSEVV+TFS 
Sbjct: 248 VAFFLLALDRYLGMHFFTNGLGGNMMMWNNLFWMWGHPEVYILILPAFGIFSEVVATFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+VYAT  I +LS+ VWLHHFFTMG+   VN FFGITTM+I+IPTG K+F+W+
Sbjct: 308 KRLFGYNSLVYATAAIMVLSFAVWLHHFFTMGNAPGVNTFFGITTMMIAIPTGVKVFDWV 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIRF  P+ WT+GF+ TFVIGGM GV++A+P A++++HNSLFL+AHFHN++I G
Sbjct: 368 FTMYRGRIRFTTPMYWTLGFLTTFVIGGMTGVLMALPPADYVVHNSLFLIAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG  +G  YWFPKA G++L+  WGK +FW W IGFY+AF+PLY LGFMG+ RRM H+ 
Sbjct: 428 AVFGFFAGYAYWFPKALGFRLDEKWGKRAFWCWFIGFYLAFIPLYALGFMGMPRRMDHYW 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +++ Q +  +AA G  +I  GI    +QL VS RKRH   D+TGDPWNGRTLEW+T+SPP
Sbjct: 488 NLAWQPYLIVAAAGAAVILAGIFFQGVQLAVSIRKRHDNRDLTGDPWNGRTLEWATASPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP++H  D+   MK+    +     + DI +PKN   G ++ + + + GFA+V
Sbjct: 548 APYNFAAIPVVHDIDALADMKERGVSWKYSGPYHDIHVPKNAVHGPIMGVLAFLFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W++W L +   +  ++ V+  + +    Y I S+E+  IE +R
Sbjct: 608 WYIWWLALAGLVGIVLAVVIRSTDDDTEYTIPSDEVKRIEAER 650


>gi|17224967|gb|AAL37189.1|AF321090_1 cytochrome o ubiquinol oxidase B [Pseudomonas putida]
          Length = 676

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/587 (57%), Positives = 444/587 (75%), Gaps = 3/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   S GYLPPEHY+QIFTAHGVIMI F+AMP  TG++N  V
Sbjct: 68  MLLRGFADAIMMRTQLAMATEGSPGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPL G+  SPGVG+
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVSGVVLINLSLGVGEFAKTGWVAYPPLPGLQYSPGVGM 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N +AT++KMR PGMKLM+MPIFTWT    N+LIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLATVLKMRTPGMKLMDMPIFTWTCTWANVLIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L TLDRY+  H FTN+LGGN MMYVNL W WGHPEVYIL+LP FGIFSEV+S F+ 
Sbjct: 248 ATLALLTLDRYMDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGIFSEVISAFTG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFG+ SM+YA+  I++L ++VWLHHFFTMGSGA+VNAFFG+ TM+ISIPTG K+FNWL
Sbjct: 308 KKLFGHHSMIYASGRISVLGFMVWLHHFFTMGSGASVNAFFGLATMLISIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GR+RF   ++WT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTIYQGRLRFTSQVMWTLGFMVTFAIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  ++FPKAFG+ L   WGK +FWFW+ GF+VAFMP Y LGFMG+TRR++   
Sbjct: 428 AVFGYIAGFAFYFPKAFGFDLHEGWGKAAFWFWISGFFVAFMPFYALGFMGMTRRLNATT 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT--GDPWNGRTLEWSTSS 478
           +     +  +A FG ++IA+GI   +IQL VS R R+   ++   GDPWN  TLEWSTSS
Sbjct: 488 NPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRNKPENVCDHGDPWNAHTLEWSTSS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA +P     D +   K+N   + +  K++ I MP NT  G+++     + GFA
Sbjct: 548 PPPFYNFAVLPKADCIDPFTEAKENGTAYQRPAKYEPIHMPNNTATGVVMGALLTVFGFA 607

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           ++WH+W L I S + T++  + +     + Y +  E I  IE ++ +
Sbjct: 608 MIWHIWWLAIASLVGTVVYFVIHAARDDQGYMVPVETIERIEAEQHK 654


>gi|254372174|ref|ZP_04987666.1| hypothetical protein FTCG_01557 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569904|gb|EDN35558.1| hypothetical protein FTCG_01557 [Francisella novicida GA99-3549]
          Length = 676

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/589 (58%), Positives = 443/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEERDAYWDHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|187932183|ref|YP_001892168.1| cytochrome bo terminal oxidase subunit I [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187713092|gb|ACD31389.1| cytochrome bo terminal oxidase subunit I [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 676

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/589 (58%), Positives = 443/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEKRDAYWDHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|89255626|ref|YP_512987.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica LVS]
 gi|115314130|ref|YP_762853.1| cytochrome o ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica OSU18]
 gi|254367020|ref|ZP_04983056.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica 257]
 gi|290953475|ref|ZP_06558096.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica URFT1]
 gi|422938126|ref|YP_007011273.1| cytochrome bo terminal oxidase subunit I [Francisella tularensis
           subsp. holarctica FSC200]
 gi|423049940|ref|YP_007008374.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica F92]
 gi|89143457|emb|CAJ78633.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica LVS]
 gi|115129029|gb|ABI82216.1| cytochrome o ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134252846|gb|EBA51940.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica 257]
 gi|407293277|gb|AFT92183.1| cytochrome bo terminal oxidase subunit I [Francisella tularensis
           subsp. holarctica FSC200]
 gi|421950662|gb|AFX69911.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. holarctica F92]
          Length = 676

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/589 (58%), Positives = 443/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEKRDAYWDHKQKGLNVDNTPVGSAKKYEDINMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|156501575|ref|YP_001427640.1| cytochrome C oxidase/ubiquinol oxidase subunit I [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|156252178|gb|ABU60684.1| cytochrome C oxidase/ubiquinol oxidase, subunit I [Francisella
           tularensis subsp. holarctica FTNF002-00]
          Length = 645

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/589 (58%), Positives = 443/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 49  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 108

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 109 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 168

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 169 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 228

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 229 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 288

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 289 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 348

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 349 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 408

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 409 VVFGAFSGLTFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 468

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 469 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 527

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 528 PVPFYNFSHDPVVEKRDAYWDHKQKGLNVDNTPVGSAKKYEDINMPKNTAVGVIIGAFSF 587

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 588 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 636


>gi|218507580|ref|ZP_03505458.1| cytochrome O ubiquinol oxidase protein, subunit I [Rhizobium etli
           Brasil 5]
          Length = 417

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/417 (79%), Positives = 379/417 (90%)

Query: 65  GARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYI 124
           GARDV+FPFLNN SFWMT+ GAI++M+SLFIGEFA TGWL YPPLSG A SPGVGVDYYI
Sbjct: 1   GARDVSFPFLNNFSFWMTTAGAIIIMLSLFIGEFAQTGWLAYPPLSGAAYSPGVGVDYYI 60

Query: 125 WSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLF 184
           W LQ+AG+GT LSGIN+IATI+KMRAPGM  M MP+FTWTALCTN+LIVA+FP+LT+ L 
Sbjct: 61  WGLQVAGVGTTLSGINLIATIVKMRAPGMTFMKMPVFTWTALCTNVLIVASFPILTATLV 120

Query: 185 LSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLF 244
           L +LDRY GT+FFTNDLGGN MMY+NLIWIWGHPEVYILVLP FGIFSEVV+TFS KRLF
Sbjct: 121 LLSLDRYAGTNFFTNDLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSGKRLF 180

Query: 245 GYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMY 304
           GY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VN+FFGITTMIISIPTGAKIFNWLFTMY
Sbjct: 181 GYASMVYATCVIMILSYIVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWLFTMY 240

Query: 305 RGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFG 364
           RGRIR+EVP+LWT+GFM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGVLFG
Sbjct: 241 RGRIRYEVPMLWTVGFMVTFVIGGMTGVMLAVPPADFVLHNSLFLIAHFHNVIIGGVLFG 300

Query: 365 LMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISL 424
           + +G+NYWFPKAFG+KL+PFWGK SFWFW IGF+ AFMPLY+LG MGVTRRMS FED SL
Sbjct: 301 MFAGVNYWFPKAFGFKLDPFWGKLSFWFWQIGFWFAFMPLYVLGLMGVTRRMSQFEDPSL 360

Query: 425 QIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPP 481
           QIWF IAAFG  LIA+GI +F+IQ++VS+ KR  L D +GDPW+GRTLEWST+SPPP
Sbjct: 361 QIWFIIAAFGVGLIALGIAAFLIQIVVSFMKREELRDDSGDPWDGRTLEWSTASPPP 417


>gi|56707436|ref|YP_169332.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110669907|ref|YP_666464.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis FSC198]
 gi|134302624|ref|YP_001122595.1| cytochrome o ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|254370871|ref|ZP_04986876.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis FSC033]
 gi|254874273|ref|ZP_05246983.1| cytochrome O ubiquinol oxidase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|379716627|ref|YP_005304963.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis TIGB03]
 gi|379716705|ref|YP_005305041.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis TIGB03]
 gi|379725309|ref|YP_005317495.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis TI0902]
 gi|385794043|ref|YP_005830449.1| cytochrome o ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis NE061598]
 gi|421754906|ref|ZP_16191865.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 80700075]
 gi|421758111|ref|ZP_16194970.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 80700103]
 gi|421759939|ref|ZP_16196763.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 70102010]
 gi|424675265|ref|ZP_18112172.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 70001275]
 gi|56603928|emb|CAG44915.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110320240|emb|CAL08298.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis FSC198]
 gi|134050401|gb|ABO47472.1| cytochrome o ubiquinol oxidase, subunit I [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151569114|gb|EDN34768.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis FSC033]
 gi|254840272|gb|EET18708.1| cytochrome O ubiquinol oxidase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158578|gb|ADA77969.1| cytochrome o ubiquinol oxidase, subunit I [Francisella tularensis
           subsp. tularensis NE061598]
 gi|377826758|gb|AFB80006.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis TI0902]
 gi|377828304|gb|AFB78383.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis TIGB03]
 gi|377828382|gb|AFB78461.1| Cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis TIGB03]
 gi|409089537|gb|EKM89574.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 80700075]
 gi|409089856|gb|EKM89888.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 70102010]
 gi|409090534|gb|EKM90549.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 80700103]
 gi|417434020|gb|EKT88992.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 70001275]
          Length = 676

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/589 (58%), Positives = 442/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK S W W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSLWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEKRDAYWGHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|421752514|ref|ZP_16189538.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis AS_713]
 gi|421754380|ref|ZP_16191354.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 831]
 gi|409084768|gb|EKM84932.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis 831]
 gi|409084942|gb|EKM85099.1| cytochrome O ubiquinol oxidase subunit I [Francisella tularensis
           subsp. tularensis AS_713]
          Length = 676

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/589 (58%), Positives = 442/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRGF DA MMR QQA++ G S GYL PEH++QIF+AHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MMFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFSAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ +L+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVVLVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+ +WFPK FG+KL    GK S W W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLTFWFPKIFGFKLNERLGKYSLWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  IIQ+ VS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWVGAMIIGLGILLQIIQIFVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEKRDAYWGHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++++  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADQVKEVESR 667


>gi|193212538|ref|YP_001998491.1| cytochrome o ubiquinol oxidase subunit I [Chlorobaculum parvum NCIB
           8327]
 gi|193086015|gb|ACF11291.1| cytochrome o ubiquinol oxidase, subunit I [Chlorobaculum parvum
           NCIB 8327]
          Length = 663

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/585 (56%), Positives = 440/585 (75%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF+DA++MRLQQA++ G++ G+LPP H++QIF +HG IMI FV MP +TG++N ++
Sbjct: 68  MLVRGFSDAMLMRLQQAMAAGANPGFLPPPHFDQIFGSHGTIMIVFVLMPFLTGLMNIVI 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGARDVAFP +N++S  +T  GA LVMISL +G+F + GW G  PL     +PG GV
Sbjct: 128 PQQIGARDVAFPLMNSISLGLTIAGAFLVMISLGVGQFTTAGWSGIAPLFEKQFNPGTGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY++W+LQI+G+G+ L+GIN + TIIKMRAPG+  M +P+F WTAL TN+L++ +FPVLT
Sbjct: 188 DYWMWALQISGVGSTLTGINFLVTIIKMRAPGLTFMRLPLFVWTALTTNVLMILSFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LFL  LDRY+G HF+TNDLGGN+M++ NL W+WGHPEVYIL+LP FG+FSEVV+TFS 
Sbjct: 248 AALFLLALDRYLGMHFYTNDLGGNMMLWNNLFWMWGHPEVYILILPAFGVFSEVVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY S+VYATV I  LS+ VWLHHFFTMG+   VN FFGITTM+I+IPTG K+++WL
Sbjct: 308 KKLFGYKSLVYATVAIMFLSFTVWLHHFFTMGNTPEVNVFFGITTMLIAIPTGVKVYDWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F VP+ WT+GF+  FV+GGM GV+L++P A+F+ HNS+FL+AHFHN++I G
Sbjct: 368 FTMYRGRITFSVPMYWTMGFLTIFVLGGMTGVLLSIPPADFVFHNSVFLIAHFHNMLIPG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +GI YWFPKAFG++L+  WGK +FW W IGF VAFMPLYILGFMG+ RRMSH+ 
Sbjct: 428 ALFGYFAGIQYWFPKAFGFRLDEKWGKRAFWGWFIGFLVAFMPLYILGFMGMPRRMSHYS 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           +++      +A  G + IA GILS IIQ IVS + R   +D+TGDPW GRTLEW+TSSPP
Sbjct: 488 NLAWHPLLIVALAGAVFIAFGILSLIIQFIVSIKNRKDNVDVTGDPWGGRTLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA IP +   D +W  K+    + + +K+ DI MPKN   G++I   +L  GFA+V
Sbjct: 548 AEYNFAVIPTVQNIDDFWDRKERGVAYQRPEKYHDIRMPKNRPHGVIICALALTFGFAMV 607

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++W L  +S    +  VI +       Y I + E+  IE++R R
Sbjct: 608 WYIWWLAALSMAGIIGTVIMSAVTDDTEYVIPAHEVQRIEEERFR 652


>gi|383640215|ref|ZP_09952621.1| cytochrome o ubiquinol oxidase, subunit I [Sphingomonas elodea ATCC
           31461]
          Length = 669

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/555 (58%), Positives = 428/555 (77%), Gaps = 4/555 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA + G + GYLPPEHY+QIF+AHG IMIFF AMP++ G++NF+V
Sbjct: 68  MLLRGFVDAIMMRTQQASAIGHAQGYLPPEHYDQIFSAHGTIMIFFGAMPVIIGLMNFVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN+ SFW+T+ GA+LV +SL IGEFA TGWL Y PLS    SPGVGV
Sbjct: 128 PLQLGVRDVAFPTLNSTSFWLTAAGALLVNMSLVIGEFARTGWLPYAPLSETTYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W++QI+G+GTL+SGIN++ TI+K+RAPGM  + MP+F WTAL  N+LIVAAFP+LT
Sbjct: 188 DYYVWAIQISGVGTLMSGINLVTTILKLRAPGMGYLRMPMFCWTALGANMLIVAAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFTN+ GGN+MM+VNLIW WGHPEVYIL+LP FGIFSE+ STFSS
Sbjct: 248 ATLAMLTLDRYLGFHFFTNEAGGNMMMFVNLIWAWGHPEVYILILPAFGIFSEIFSTFSS 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S+ VWLHHFFTMG+G +VNA FGI T II++ TG KI+NWL
Sbjct: 308 KPLFGYRSMVAATLFIVVVSFTVWLHHFFTMGAGGDVNAAFGIATSIIAVGTGVKIYNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM  GR+RF  P+LW++ FM+TFVIGGM GV+LAVP A+F+LHNS+FLVAHFHNVI  G
Sbjct: 368 FTMVGGRLRFPTPMLWSLAFMMTFVIGGMTGVLLAVPPADFMLHNSMFLVAHFHNVINSG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +GI YWFPKAFG++L+ +WGK +F   L GF + F  LY+LG  G+TRR+ H +
Sbjct: 428 VVFGAFAGITYWFPKAFGFRLDEYWGKMAFCLTLAGFLIVFGALYVLGLEGMTRRLQHID 487

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
                 W  ++  G  ++ +G+ S I+Q++VS R R  L D TGDPW+GR+LEW+TSSPP
Sbjct: 488 FTEWAPWLYVSVAGIGVMILGVASQIVQIVVSIRNREALRDETGDPWDGRSLEWATSSPP 547

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK----FPKDKFQDILMPKNTNIGILISIFSLIMGF 536
           P +NFA +P +H  + +W +K+   +      +  ++ I MP+N+  G++ + F+ ++GF
Sbjct: 548 PAFNFAVLPKVHGEEPYWTIKRQAIESQGLADEPPYEAIEMPRNSATGVVTAFFATLIGF 607

Query: 537 ALVWHMWLLTIISFI 551
           +++W +W L  + F+
Sbjct: 608 SMIWMIWWLAALGFV 622


>gi|387823765|ref|YP_005823236.1| Cytochrome O ubiquinol oxidase subunit I [Francisella cf. novicida
           3523]
 gi|328675364|gb|AEB28039.1| Cytochrome O ubiquinol oxidase subunit I [Francisella cf. novicida
           3523]
          Length = 676

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/589 (59%), Positives = 445/589 (75%), Gaps = 9/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DA MMR QQA++ G S GYL PEH++QIFTAHGVIMIFFVAMPL+  ++N+++
Sbjct: 80  MLFRGFVDAAMMRTQQALASGDSTGYLIPEHFDQIFTAHGVIMIFFVAMPLIFALMNWVI 139

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP++N+LSFW+   GA+L+ ISL +G+FA  GWL YPP S    SP VG 
Sbjct: 140 PLQIGARDVAFPYMNSLSFWLFVVGAMLINISLLVGDFAHAGWLAYPPFSETTYSPTVGT 199

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW LQI+GIG+L++GIN   TIIKMR  GM LM MPIFTW +LC+ IL+VAAFPVLT
Sbjct: 200 DYYIWGLQISGIGSLMTGINFFVTIIKMRCKGMTLMKMPIFTWASLCSVILVVAAFPVLT 259

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L TLDRY GTHFFT   GG+ MMYVNLIWIWGHPEVYILVLP+FG+FSEV +TFS 
Sbjct: 260 VTLGLLTLDRYFGTHFFTVSGGGDQMMYVNLIWIWGHPEVYILVLPLFGVFSEVAATFSK 319

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY++MV+A++VIT+LS+ VWLHHFFTMG+ ANVNAFFGI TMII+IPTG KIFNWL
Sbjct: 320 KPLFGYTTMVWASIVITILSFTVWLHHFFTMGASANVNAFFGIMTMIIAIPTGVKIFNWL 379

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F  P++W IGFMI F +GGM GV+L+VP  +F +HNS+FL+AHFHNVIIGG
Sbjct: 380 FTMYKGRITFATPMMWLIGFMIVFSVGGMTGVLLSVPGVDFQMHNSVFLIAHFHNVIIGG 439

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  SG+++WFPK FG+KL    GK SFW W IGF+VAFMPLYILG MG+TRR+ H++
Sbjct: 440 VVFGAFSGLSFWFPKIFGFKLNERLGKYSFWCWFIGFFVAFMPLYILGTMGMTRRLYHYD 499

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSS 478
             +  Q    +A  G ++I +GIL  ++Q+IVS ++R     +  D W  GRTLEW   S
Sbjct: 500 AATGYQPLLIVAWIGAIIIGLGILLQVLQIIVSIKQRDQN-RVGADAWGYGRTLEWGIPS 558

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK------DKFQDILMPKNTNIGILISIFSL 532
           P P YNF+  P++ + D++W  K+              K++DI MPKNT +G++I  FS 
Sbjct: 559 PVPFYNFSHDPVVEERDAYWDHKQKGLNVDNTPVGSAKKYEDIHMPKNTAVGVIIGAFSF 618

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + GFA VWH+W L I+  +  +  V+Y +F+Y  +YY+ ++E+  +E +
Sbjct: 619 VFGFAAVWHIWWLAIVGVVGIIGTVLYRSFDYDIDYYVKADEVKEVESR 667


>gi|395792556|ref|ZP_10471980.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella vinsonii
           subsp. arupensis Pm136co]
 gi|423713218|ref|ZP_17687478.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella vinsonii
           subsp. arupensis OK-94-513]
 gi|395423259|gb|EJF89454.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella vinsonii
           subsp. arupensis OK-94-513]
 gi|395432113|gb|EJF98102.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella vinsonii
           subsp. arupensis Pm136co]
          Length = 672

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/589 (56%), Positives = 431/589 (73%), Gaps = 11/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQAMALGSETAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFSELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMKMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLVVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK   F G  SFW W +GFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRFLGIASFWCWFVGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYR---KRHTLIDIT-GDPW-NGRTLEW 474
            + S Q  F IAA G  +I +GIL F++Q++++ R   K    + +T  D W +GRTLEW
Sbjct: 493 MEPSWQPMFIIAALGAFIILLGILCFVLQVVLAIRYGIKHKGRLPVTLNDSWGDGRTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP +   D++W+MKKN ++ P   F  I MP NT+ GI+   FSL++
Sbjct: 553 SVSSPPPAYNFAIIPEVQHDDAYWHMKKNGYQRPTSGFSKIHMPSNTSAGIIAGFFSLVI 612

Query: 535 GFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E 
Sbjct: 613 GFALVWHIWWLVAIGLIGFIAT--IVRHSLTGDHHGYYIPAEEVQKTED 659


>gi|417472919|ref|ZP_12168481.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Rubislaw str. A4-653]
 gi|353652700|gb|EHC94460.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Rubislaw str. A4-653]
          Length = 540

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/519 (63%), Positives = 414/519 (79%), Gaps = 1/519 (0%)

Query: 65  GARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYI 124
           GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGVDY+I
Sbjct: 9   GARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWI 68

Query: 125 WSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLF 184
           W+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + 
Sbjct: 69  WALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVA 128

Query: 185 LSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLF 244
           L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLF
Sbjct: 129 LLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLF 188

Query: 245 GYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMY 304
           GY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY
Sbjct: 189 GYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMY 248

Query: 305 RGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFG 364
           +GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG
Sbjct: 249 QGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFG 308

Query: 365 LMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISL 424
             +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D   
Sbjct: 309 CFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQF 368

Query: 425 QIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYN 484
                +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPPP YN
Sbjct: 369 HTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYN 428

Query: 485 FAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMW 543
           FA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++WH+W
Sbjct: 429 FAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIW 488

Query: 544 LLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 489 WLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 527


>gi|417331685|ref|ZP_12115845.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Alachua str. R6-377]
 gi|353584600|gb|EHC44668.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Alachua str. R6-377]
          Length = 541

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/519 (63%), Positives = 414/519 (79%), Gaps = 1/519 (0%)

Query: 65  GARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYI 124
           GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGVDY+I
Sbjct: 10  GARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWI 69

Query: 125 WSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLF 184
           W+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + 
Sbjct: 70  WALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVA 129

Query: 185 LSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLF 244
           L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLF
Sbjct: 130 LLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLF 189

Query: 245 GYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMY 304
           GY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY
Sbjct: 190 GYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMY 249

Query: 305 RGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFG 364
           +GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG
Sbjct: 250 QGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFG 309

Query: 365 LMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISL 424
             +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D   
Sbjct: 310 CFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQF 369

Query: 425 QIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYN 484
                +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPPP YN
Sbjct: 370 HTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYN 429

Query: 485 FAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMW 543
           FA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++WH+W
Sbjct: 430 FAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIW 489

Query: 544 LLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 490 WLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 528


>gi|406941845|gb|EKD74225.1| hypothetical protein ACD_45C00029G0005, partial [uncultured
           bacterium]
          Length = 533

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/533 (60%), Positives = 411/533 (77%), Gaps = 5/533 (0%)

Query: 56  INFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQS 115
           IN ++PLQIGARDVA+PFLN+LSFW+   GA+LV ISL IG+FA+TGWL YPPLS +A S
Sbjct: 1   INLVLPLQIGARDVAYPFLNSLSFWLAVVGAMLVNISLLIGDFAATGWLAYPPLSELAYS 60

Query: 116 PGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAA 175
           PGVGVDYYIW+LQI+G+GTLLSGIN + T++KMR PGM +M MPIF WTA C+ IL++ A
Sbjct: 61  PGVGVDYYIWALQISGVGTLLSGINFVVTVLKMRCPGMTMMKMPIFVWTAFCSMILVILA 120

Query: 176 FPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVV 235
           FPVLT  L L  LDRY G HFFT D GGN MMY+N+IWIWGHPEVYIL+LP FGI+SE+V
Sbjct: 121 FPVLTVTLALLFLDRYFGMHFFTTDAGGNAMMYINMIWIWGHPEVYILILPAFGIYSEIV 180

Query: 236 STFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAK 295
           +TFS K LFGY +MV+AT  IT+L++IVWLHHFFTMG+GANVNAFFGI TMIIS+PTG K
Sbjct: 181 ATFSKKYLFGYETMVWATACITILAFIVWLHHFFTMGAGANVNAFFGIMTMIISVPTGVK 240

Query: 296 IFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHN 355
           +FNWLFTMYRGRI F  P+LWTIGF+ TFV GG+ GV++AVPA ++ +HNSLFLVAHFHN
Sbjct: 241 VFNWLFTMYRGRITFSTPMLWTIGFITTFVFGGVTGVLMAVPAIDYQVHNSLFLVAHFHN 300

Query: 356 VIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRR 415
            IIGGV+FG + G+ YWFPKAFG+KL    GKC+FW WLIGFY+AF+PLY+LG MG+TRR
Sbjct: 301 AIIGGVVFGYLGGLTYWFPKAFGFKLNETLGKCAFWCWLIGFYIAFIPLYLLGLMGMTRR 360

Query: 416 MSHFE-DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEW 474
           ++H++       +  IAA G  +I  GI+  ++QLIVS + R    D+TGDPW+GRTLEW
Sbjct: 361 LNHYDVSTGWHPYLVIAAIGASIIVCGIIFQVLQLIVSIKNREQNRDVTGDPWDGRTLEW 420

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMK----KNNFKFPKDKFQDILMPKNTNIGILISIF 530
           S  SP P YNFA  P++   D++W  K    +NN   P   + DI MPKNT+ G +I++F
Sbjct: 421 SIPSPAPFYNFAVTPIVDSRDAFWAAKLQKSENNNLNPAPHYHDIHMPKNTSAGFMIAVF 480

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           S ++GFA +WH+  L  +  +  +  ++ ++FN   +YY+ S EI  ++ +R+
Sbjct: 481 SGLVGFATIWHIVWLMALGLLGVIFTMVVHSFNMSTDYYLKSNEIEKLDLQRV 533


>gi|296444726|ref|ZP_06886689.1| Cytochrome-c oxidase [Methylosinus trichosporium OB3b]
 gi|296257674|gb|EFH04738.1| Cytochrome-c oxidase [Methylosinus trichosporium OB3b]
          Length = 670

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/545 (58%), Positives = 420/545 (77%), Gaps = 3/545 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RGF DAV+MR QQA+++ +  GYLPPEH++QIF++HG IMIFF AMPL  G++NF++
Sbjct: 70  MMLRGFADAVLMRSQQAMAYRAP-GYLPPEHFDQIFSSHGTIMIFFGAMPLTIGLMNFVI 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP  N+  FW+T+ GA+LV ISL +G F+  GWL YPPLS +  SP VGV
Sbjct: 129 PLQLGMRDVAFPTWNSTGFWLTATGALLVNISLVVGVFSRAGWLPYPPLSELEFSPDVGV 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L I+GIGTL++GIN++ TI+KMRAPGM  + MP+F WTAL +++LIVAAFP+LT
Sbjct: 189 DYYLWALLISGIGTLVTGINLVTTILKMRAPGMGYLKMPMFCWTALASSLLIVAAFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFT   GGN+MM++NLIW WGHPEVYILVLP FG+FSEV+STFS 
Sbjct: 249 ATLAMLALDRYLGFHFFTTAGGGNMMMFINLIWAWGHPEVYILVLPAFGVFSEVISTFSG 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++SY+VWLHHFFTMG+G  VNA FGI T +I++ TG K+FNW+
Sbjct: 309 KPLFGYRSMVLATLGICIISYLVWLHHFFTMGAGGTVNAAFGIATSVIAVVTGVKVFNWV 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TMY GRIRF  P+LW+IGF++TFVIGGM GV+LAVP A+FLLHNSLFLVAHFHN IIGG
Sbjct: 369 LTMYGGRIRFATPMLWSIGFIVTFVIGGMTGVLLAVPPADFLLHNSLFLVAHFHNTIIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG+ +G+ YWFPKAFG++L   WG  +FWF L GF   F+PLY+LG +G+ RRM H++
Sbjct: 429 VVFGVFAGVAYWFPKAFGFRLHEGWGVAAFWFTLAGFCAVFIPLYMLGLLGMPRRMQHYD 488

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               + W Q A  G  L A+ ++  I+QL+VS R+R +L D TGDPWNGR+LEW+TSSPP
Sbjct: 489 MEMWRPWTQAAMIGVYLFAIALICQIVQLVVSIRRRDSLRDDTGDPWNGRSLEWATSSPP 548

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKD--KFQDILMPKNTNIGILISIFSLIMGFAL 538
           P +NFA  P +   + +W +K+   +  ++  +++ I MP+N   G +   F+ + GFA+
Sbjct: 549 PSFNFAAEPNVRGEEPYWEIKRRAIETQQNDARYEAIAMPRNNATGFVTGFFATVTGFAM 608

Query: 539 VWHMW 543
           VW +W
Sbjct: 609 VWRIW 613


>gi|417379154|ref|ZP_12147606.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Johannesburg str.
           S5-703]
 gi|353618336|gb|EHC69043.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Johannesburg str.
           S5-703]
          Length = 533

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/519 (63%), Positives = 414/519 (79%), Gaps = 1/519 (0%)

Query: 65  GARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYI 124
           GARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGVDY+I
Sbjct: 2   GARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWI 61

Query: 125 WSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLF 184
           W+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + 
Sbjct: 62  WALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVA 121

Query: 185 LSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLF 244
           L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLF
Sbjct: 122 LLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLF 181

Query: 245 GYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMY 304
           GY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY
Sbjct: 182 GYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMY 241

Query: 305 RGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFG 364
           +GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG
Sbjct: 242 QGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFG 301

Query: 365 LMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISL 424
             +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D   
Sbjct: 302 CFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQF 361

Query: 425 QIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYN 484
                +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPPP YN
Sbjct: 362 HTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYN 421

Query: 485 FAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMW 543
           FA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++WH+W
Sbjct: 422 FAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIW 481

Query: 544 LLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 482 WLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 520


>gi|451941419|ref|YP_007462056.1| cytochrome o ubiquinol oxidase subunit I [Bartonella vinsonii
           subsp. berkhoffii str. Winnie]
 gi|451900806|gb|AGF75268.1| cytochrome o ubiquinol oxidase subunit I [Bartonella vinsonii
           subsp. berkhoffii str. Winnie]
          Length = 672

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/592 (56%), Positives = 431/592 (72%), Gaps = 17/592 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQAMALGSETAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+  AIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAAAILINISLGVGNFGRGGWLMYPPFSELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMKMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLVVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+++WFPK FGYK   F G  SFW W +GFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLSFWFPKVFGYKPNRFLGIASFWCWFVGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q+I++  Y  +H      TL D  GD   GRT
Sbjct: 493 MEPSWQPMFIIAALGAFIILLGILCFVLQVILAIWYGIKHKGRLPVTLNDSWGD---GRT 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEWS SSPPP YNFA IP +   D++W+MKKN ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWSISSPPPAYNFAIIPEVQNDDAYWHMKKNGYQRPTSGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           L++GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E 
Sbjct: 610 LVVGFALVWHIWWLVAIGLIGFIAT--IVRHSLTGDHHGYYIPAEEVQKTED 659


>gi|395789155|ref|ZP_10468685.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella taylorii
           8TBB]
 gi|395431289|gb|EJF97316.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella taylorii
           8TBB]
          Length = 672

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/591 (56%), Positives = 426/591 (72%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS S GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSESAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMKMPVFCWSAFVSNILILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 AVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSMLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TM++GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMHKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRALGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G L+I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGALIILLGILCFVLQVVLAIWYGIKHKGRLPITLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEWSTSSPPP YNFA IP +   D++W MKKN ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWSTSSPPPSYNFAIIPRVETDDAYWNMKKNGYQRPTSGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L  I  I     IV ++       YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAIGMIGFVATIVCHSLIGDHHGYYIPAEEVQKTEDA 660


>gi|395791558|ref|ZP_10471014.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella alsatica IBS
           382]
 gi|395407861|gb|EJF74481.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella alsatica IBS
           382]
          Length = 672

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/591 (56%), Positives = 429/591 (72%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++FGS + GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALAFGSETAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GA+L+ ISL IG F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAMLINISLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN IATI+KMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFIATIVKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLVVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++GI +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGIAFWFPKVFGYKPNRMLGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAFIILLGILCFVLQVVLAIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA IP +   D++W MKKN ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPSYNFAIIPEVQADDAYWNMKKNGYQRPTSGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRN-YYISSEEITCIEKK 581
           L++GFALVWH+W L  I  I  +  +++++     + YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAIGMISFVATIVHHSLTGDHHGYYIPAEEVQKTEDA 660


>gi|444920646|ref|ZP_21240486.1| Ubiquinol oxidase subunit 1 [Wohlfahrtiimonas chitiniclastica SH04]
 gi|444508216|gb|ELV08388.1| Ubiquinol oxidase subunit 1 [Wohlfahrtiimonas chitiniclastica SH04]
          Length = 668

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/585 (56%), Positives = 428/585 (73%), Gaps = 4/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAI-SFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF+DA+MMR Q A+ S G   GYLPPEHY+QIF+AHGVIMIFF+AMP + G++N I
Sbjct: 68  MLLRGFSDAIMMRTQMALASTGDRVGYLPPEHYDQIFSAHGVIMIFFMAMPFIIGLMNII 127

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +P Q+G RDVAFP LN +S W+T  GAIL+ +SL IGEFA TGW+ Y PLS    SPGVG
Sbjct: 128 IPQQLGRRDVAFPVLNAVSVWLTVAGAILINLSLGIGEFAKTGWVAYAPLSESLYSPGVG 187

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WS+QI+G+GT  + INM  TI++MRAPGMK+  MP+F+W+  CT+ILI+A FP+L
Sbjct: 188 VDYYMWSIQISGLGTTFAAINMFVTILRMRAPGMKMFQMPLFSWSTFCTSILILATFPIL 247

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGG-NIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTF 238
           T+ + L  LDRY+G   FTN LGG + MMYVNLIW WGHPEVYIL+LPVFGIFSEVVSTF
Sbjct: 248 TATMLLLALDRYLGFEIFTNTLGGGSQMMYVNLIWAWGHPEVYILILPVFGIFSEVVSTF 307

Query: 239 SSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFN 298
           S K LFGY ++V+A + I  +S  VWLHHFFTMG+G NVNAFFGITTM+I+IPTG K+FN
Sbjct: 308 SRKYLFGYKALVWAIIAILFMSLTVWLHHFFTMGAGVNVNAFFGITTMLIAIPTGVKVFN 367

Query: 299 WLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVII 358
           WLFT+YRG++R E P+LW +GF++ FV+GGM GV+LA+P  N+ +HN++F+VAHFHN II
Sbjct: 368 WLFTIYRGQVRMEPPMLWAVGFLVLFVLGGMTGVMLAIPGVNYSVHNTMFVVAHFHNTII 427

Query: 359 GGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSH 418
           GGV+FG+M+G NYWFPKAFG+KL   WG  SF+ W  GF  AF+PLY++GF G+ RR+S 
Sbjct: 428 GGVVFGVMAGYNYWFPKAFGFKLNKGWGVASFYLWFFGFLFAFVPLYLVGFDGMPRRVSQ 487

Query: 419 FEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
             D     +  +A FG ++I  GI++ +IQL VS + R  L D TGDPWNGRTLEWS  S
Sbjct: 488 NIDYRYGPYLVVAFFGAVMILFGIITMLIQLFVSIKHREQLRDETGDPWNGRTLEWSIPS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILI-SIFSLIMGF 536
           PPP YNFA IP +   D +W +K+    + P   ++DI +PK+T +G +   + + +  F
Sbjct: 548 PPPAYNFAVIPEVDDIDMFWKLKQEGKAYDPHRTYEDIYVPKHTALGFVSGGVLAGLTAF 607

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            LVW +W L II F   +I  I  +F       I  E I   ++ 
Sbjct: 608 CLVWSIWWLGIIFFGAAIIFWIIESFREHEEVRIPKENIAAADQA 652


>gi|121601749|ref|YP_989523.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella bacilliformis
           KC583]
 gi|421761325|ref|ZP_16198128.1| cytochrome o ubiquinol oxidase subunit I [Bartonella bacilliformis
           INS]
 gi|120613926|gb|ABM44527.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella bacilliformis
           KC583]
 gi|411173109|gb|EKS43157.1| cytochrome o ubiquinol oxidase subunit I [Bartonella bacilliformis
           INS]
          Length = 672

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/587 (56%), Positives = 422/587 (71%), Gaps = 7/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSS-FGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           MLFRGF DA+MMR  QA++ GS   GYLPP+H++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLFRGFADAIMMRTHQALALGSEKSGYLPPDHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NN  FW+T   AIL+ +SL IG F   GWL YPP SG+  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNFGFWITVAAAILINVSLGIGNFGRGGWLMYPPFSGLQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ+AGIGT +  +N+IATIIKMRAPGM ++ MP+F W A  +NILIV  +PVL
Sbjct: 193 VDYYLWSLQLAGIGTTMGSVNLIATIIKMRAPGMTMLKMPVFCWGAFVSNILIVVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SE+V TFS
Sbjct: 253 AVAFLLLAGDRYLGMNFFTNTAGGNPMVWINYVWIFGHPEVYVLVIPAFGIISEIVPTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMIISIPTG KIFNW
Sbjct: 313 SKRLFGYASMVWAIIVILVLSLLVWGHHFFTMGGGEAVNTFFGIATMIISIPTGVKIFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GRIRFE P+LW IG + TFV GG+ GV++++  A++  HNSLFL+AHFH+ IIG
Sbjct: 373 LFTMYKGRIRFEPPMLWCIGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLIAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  + G+ +WFPK FG K     G  SFW W +GFY+AF P+YILG MG TRR+ H+
Sbjct: 433 GVVFAYLGGLAFWFPKVFGVKPNRALGIASFWCWFVGFYLAFFPVYILGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRHT--LIDITGDPW-NGRTLEW 474
            +   Q  F IAA G  +I +GIL  ++Q++++  Y  +H   L  I  DPW + RTLEW
Sbjct: 493 IEPGWQPMFIIAALGACIILIGILCLVLQIVLAIWYGVKHKGRLPVIINDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP +H  D++W MKK  ++ P   F  I MP NT+ G++ S FSLI+
Sbjct: 553 SVSSPPPDYNFAIIPTVHAEDAYWDMKKRGYQRPTSGFSKIHMPANTSAGVIASFFSLIV 612

Query: 535 GFALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEK 580
            F+LVWH+W L +I  I     I+  +       YYI +EE+   E 
Sbjct: 613 AFSLVWHIWWLVVIGLIGFIATIMCRSLLGNHHGYYIPAEEVQKTED 659


>gi|338733527|ref|YP_004672000.1| ubiquinol oxidase subunit 1 [Simkania negevensis Z]
 gi|336482910|emb|CCB89509.1| ubiquinol oxidase subunit 1 [Simkania negevensis Z]
          Length = 653

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/584 (57%), Positives = 433/584 (74%), Gaps = 4/584 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML +GF DA+MMR QQAI+ G + GYL  EHY QIFTAHGV MIFFV M ++ G+IN I+
Sbjct: 67  MLVKGFIDALMMRAQQAIACGDNLGYLGAEHYQQIFTAHGVTMIFFVGMGVIFGLINIIL 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFP LN++SFW+ + G + ++ISL IG FA TGW  YPPL+G+  +PGVGV
Sbjct: 127 PLQLGARDVAFPLLNSISFWLFTAGGLYILISLVIGVFAGTGWTAYPPLAGLKYNPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+QI+GIG+LLSG+N   TI+KMR PGM L  MP+F W  L   ILI+A+FP+LT
Sbjct: 187 DYWIWSIQISGIGSLLSGVNFFVTILKMRCPGMTLWRMPVFAWATLGCVILIIASFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + + DR + T  FT   GGN MMY+NL+W WGHPEVYIL+LP+FG+FSE V  FS 
Sbjct: 247 ANLAMLSTDRLLDTKIFTAGFGGNPMMYINLLWAWGHPEVYILILPIFGVFSEYVPVFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A +VI  LS+IVWLHHFFTMG+G +VNAFFGI TMII++PTG K+FNWL
Sbjct: 307 KKLFGYPSMVWAIIVIVFLSFIVWLHHFFTMGAGPSVNAFFGIMTMIIAVPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+++F  P+LW +GF+ITF +GGM GV++AVP  +F +HNSLFL+AHFH VIIGG
Sbjct: 367 FTMYRGKVQFTSPMLWFVGFVITFALGGMTGVMMAVPGIDFQVHNSLFLIAHFHQVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG   G  YWFPK FG+ L   +GK +FW W  GF +AFMPLY+LGFMG TRR++H+E
Sbjct: 427 VVFGFFGGFTYWFPKMFGFTLIEKYGKAAFWCWFFGFLIAFMPLYLLGFMGATRRLNHYE 486

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
                Q  F  AA G+L+IA+G+   ++QL VS + R    D TGDPW+GRTLEW+T+SP
Sbjct: 487 ASTGWQPLFVTAAIGSLIIAVGVFFQVLQLWVSIKHRKENRDTTGDPWDGRTLEWATTSP 546

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK--FQDILMPKNTNIGILISIFSLIMGFA 537
           PP YNFAF P +H  D++W MK +  K P D   ++DI MP N+ IG  I + S I GFA
Sbjct: 547 PPFYNFAFTPEVHGRDAFWDMKYSKRK-PLDNRPYEDIHMPSNSGIGFYIGVLSCIGGFA 605

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            VWHM+ L  +S +  +I +I    N   +YY+ ++E+  IE +
Sbjct: 606 FVWHMFWLAGLSVLGIIISLIARLGNKHPHYYVKADEVERIETR 649


>gi|395780381|ref|ZP_10460843.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella washoensis
           085-0475]
 gi|395418727|gb|EJF85044.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella washoensis
           085-0475]
          Length = 672

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/593 (56%), Positives = 427/593 (72%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS S GYLPP+H++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSESAGYLPPDHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFSELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 AVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLVVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++GI +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGIAFWFPKVFGYKPNRLLGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQ--LIVSYRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q  L++ Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAFIILLGILCFVLQVVLVIWYGIKHKGHLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA IP +   D++W MKK+ ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPSYNFAIIPQVQSDDAYWNMKKSGYQRPTSGFTKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E+ 
Sbjct: 610 LVVGFALVWHIWWLVAIGLIGFIAT--IVCHSLTGDHHGYYIPAEEVQKTEEA 660


>gi|319898314|ref|YP_004158407.1| cytochrome o ubiquinol oxidase subunit I [Bartonella clarridgeiae
           73]
 gi|319402278|emb|CBI75817.1| cytochrome o ubiquinol oxidase subunit I [Bartonella clarridgeiae
           73]
          Length = 672

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/587 (55%), Positives = 427/587 (72%), Gaps = 7/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++FGS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALAFGSETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T   A+L+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAAAVLINISLGVGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N +ATIIKMRAPGM +M MP+F W+A  +N LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSVNFVATIIKMRAPGMTMMKMPVFCWSAFVSNTLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SE+VSTFS
Sbjct: 253 GVAFVLLAADRYLGMNFFTNVAGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEIVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A +VI +LS +VW HHFFTMG G  VN FFGI TMIIS+PTG K+FNW
Sbjct: 313 SKRLFGYASMIWAIIVILVLSLLVWGHHFFTMGGGEAVNTFFGIATMIISVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FG K     G  SFW W +GFY+AF P+Y+LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGIKPNRILGIASFWCWFVGFYLAFFPVYMLGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRHT--LIDITGDPW-NGRTLEW 474
            +   Q  F IAA G  +I +GIL F++Q++++  Y  +H   L   + DPW + RTLEW
Sbjct: 493 IEPGWQPMFMIAAVGAFVILLGILCFVLQMVLTIWYGIKHKGHLPVTSNDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP +   D++W MKK  ++ P   F  I MP NT+ GI+   FSLI+
Sbjct: 553 SISSPPPSYNFAIIPEVQSEDAYWDMKKRGYQRPTSGFVKIHMPSNTSAGIVAGFFSLIV 612

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRN-YYISSEEITCIEK 580
           GFALVWH+W L I+  I  +  +IY++     + YYIS+EE+   E 
Sbjct: 613 GFALVWHIWWLVILGLIGFITTIIYHSLTGDHHGYYISAEEVQKTED 659


>gi|417537118|ref|ZP_12190088.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Wandsworth str. A4-580]
 gi|353669028|gb|EHD06050.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Wandsworth str. A4-580]
          Length = 540

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/515 (62%), Positives = 410/515 (79%), Gaps = 1/515 (0%)

Query: 69  VAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQ 128
           VAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGVDY+IW+LQ
Sbjct: 13  VAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQ 72

Query: 129 IAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTL 188
           ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + L TL
Sbjct: 73  LSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTL 132

Query: 189 DRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSS 248
           DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S
Sbjct: 133 DRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTS 192

Query: 249 MVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRI 308
           +V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI
Sbjct: 193 LVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRI 252

Query: 309 RFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSG 368
            F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G
Sbjct: 253 VFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAG 312

Query: 369 INYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWF 428
           + YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D       
Sbjct: 313 MTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTML 372

Query: 429 QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFI 488
            +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPPP YNFA +
Sbjct: 373 MVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVV 432

Query: 489 PLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTI 547
           P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++WH+W L I
Sbjct: 433 PHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAI 492

Query: 548 ISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 493 VGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 527


>gi|417504408|ref|ZP_12174129.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Senftenberg str.
           A4-543]
 gi|353651613|gb|EHC93654.1| Cytochrome O ubiquinol oxidase subunit 1, partial [Salmonella
           enterica subsp. enterica serovar Senftenberg str.
           A4-543]
          Length = 528

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/515 (62%), Positives = 410/515 (79%), Gaps = 1/515 (0%)

Query: 69  VAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQ 128
           VAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SP VGVDY+IW+LQ
Sbjct: 1   VAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQ 60

Query: 129 IAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTL 188
           ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + L TL
Sbjct: 61  LSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTL 120

Query: 189 DRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSS 248
           DRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S
Sbjct: 121 DRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTS 180

Query: 249 MVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRI 308
           +V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI
Sbjct: 181 LVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRI 240

Query: 309 RFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSG 368
            F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G
Sbjct: 241 VFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAG 300

Query: 369 INYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWF 428
           + YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D       
Sbjct: 301 MTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTML 360

Query: 429 QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFI 488
            +AA G  LIA+GIL  +IQ+ VS R R    D+TGDPW GRTLEWSTSSPPP YNFA +
Sbjct: 361 MVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVV 420

Query: 489 PLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTI 547
           P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+ + GFA++WH+W L I
Sbjct: 421 PHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAI 480

Query: 548 ISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 481 VGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 515


>gi|319945341|ref|ZP_08019603.1| cytochrome o ubiquinol oxidase subunit I [Lautropia mirabilis ATCC
           51599]
 gi|319741911|gb|EFV94336.1| cytochrome o ubiquinol oxidase subunit I [Lautropia mirabilis ATCC
           51599]
          Length = 667

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/585 (56%), Positives = 427/585 (72%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML  GF  A+M+ LQ A S G   GYL P HY+QI TAHGVIM+FFVAMPL+TG +N++V
Sbjct: 78  MLLPGFAGALMLLLQHARSAGGGPGYLSPHHYDQILTAHGVIMVFFVAMPLITGFMNYLV 137

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGAR  AFPFL NL FWM++ GA+LV++SLF+G F+  GWL YPPLSGI  SP VG+
Sbjct: 138 PLQIGARGTAFPFLGNLGFWMSAFGAVLVVLSLFVGGFSQVGWLAYPPLSGIEFSPDVGM 197

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY+W+L IAG G  LS IN+I T++KMR PGM LM MP+FTW+ALC N+LI+A FPV  
Sbjct: 198 DYYLWALLIAGGGATLSAINLIVTLVKMRCPGMGLMKMPLFTWSALCANVLIIAIFPVFM 257

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LFL  LDR+ GTHFFTNDLGGN M+YVNLI  W  PEV +L+LP FGIFSE+ +TFS 
Sbjct: 258 AALFLLALDRFAGTHFFTNDLGGNAMIYVNLIRAWVLPEVCVLMLPAFGIFSEITTTFSG 317

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MV AT  +TLL+ +V L H   +G+G   + F G++T+I +IP GA + NW+
Sbjct: 318 KRLFGYTAMVGATCSVTLLAVLVGLLHLLPLGAGTRTDTFLGLSTLIFAIPVGAMVLNWV 377

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+YRG IRFEVP++W +GF+I   IG +AGV LAV  A+ +LH+SLF+ A FH+VI+G 
Sbjct: 378 FTLYRGAIRFEVPMMWVLGFLIMVAIGAVAGVQLAVLPADSVLHDSLFVTAFFHHVILGC 437

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+  LM+GI YWFPKAFGY+L PFWG+ SFW   +G  +A  PLY+LG MGV  RMSH +
Sbjct: 438 VVHALMAGIAYWFPKAFGYQLIPFWGRLSFWCEFLGIGLAITPLYMLGLMGVPPRMSHVD 497

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D SLQ+ F IAA G  LI +GILS I QL+ S+ +R  L D TGDPW+ RTLEWST+SPP
Sbjct: 498 DPSLQVGFLIAASGAGLILVGILSLIAQLVHSFIRRPALRDETGDPWDARTLEWSTASPP 557

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALVW 540
           P YNFAF P++H+ D+WW MK+N +  P   F  I MPKNT  G  I+    + GF ++W
Sbjct: 558 PDYNFAFTPVVHEIDAWWDMKRNGYVRPTRGFIPIPMPKNTAAGFTIAALGAVFGFCMIW 617

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            +WLL   SFI+ L  +I + F++ R + I++ ++   E  R RL
Sbjct: 618 QIWLLAGASFIVLLGAIIAHAFSHGRGFPITAAQVERTEAGRTRL 662


>gi|423712024|ref|ZP_17686329.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella washoensis
           Sb944nv]
 gi|395412872|gb|EJF79352.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella washoensis
           Sb944nv]
          Length = 672

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/592 (56%), Positives = 427/592 (72%), Gaps = 17/592 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS S GYLPP+H++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSESAGYLPPDHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFSELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRA GM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRASGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLVVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++GI +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGIAFWFPKVFGYKPNRLLGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQ--LIVSYRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q  L++ Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAFIILLGILCFVLQVVLVIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA IP +   D++W MKK+ ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPSYNFAIIPQVQSDDAYWNMKKSGYQRPTSGFTKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           L++GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E+
Sbjct: 610 LVVGFALVWHIWWLVAIGLIGFIAT--IVCHSLTGDHHGYYIPAEEVQKTEE 659


>gi|415782264|ref|ZP_11491464.1| ubiquinol oxidase subunit 1 domain protein, partial [Escherichia
           coli EPECa14]
 gi|323157115|gb|EFZ43239.1| ubiquinol oxidase subunit 1 domain protein [Escherichia coli
           EPECa14]
          Length = 503

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/489 (64%), Positives = 391/489 (79%), Gaps = 1/489 (0%)

Query: 95  IGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMK 154
           +GEFA TGWL YPPLSGI  SPGVGVDY+IWSLQ++GIGT L+GIN   TI+KMRAPGM 
Sbjct: 2   VGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMT 61

Query: 155 LMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWI 214
           +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW 
Sbjct: 62  MFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWA 121

Query: 215 WGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSG 274
           WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+G
Sbjct: 122 WGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAG 181

Query: 275 ANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVIL 334
           ANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   +LWTIGF++TF +GGM GV+L
Sbjct: 182 ANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLL 241

Query: 335 AVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWL 394
           AVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+
Sbjct: 242 AVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWI 301

Query: 395 IGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYR 454
           IGF+VAFMPLY LGFMG+TRR+S   D        IAA G +LIA+GIL  +IQ+ VS R
Sbjct: 302 IGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIR 361

Query: 455 KRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQ 513
            R    D+TGDPW GRTLEW+TSSPPP YNFA +P +H+ D++W MK+    + K D ++
Sbjct: 362 DRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYE 421

Query: 514 DILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSE 573
           +I MPKN+  GI+I+ FS I GFA++WH+W L I+ F   +I  I  +F+   +YY+   
Sbjct: 422 EIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVA 481

Query: 574 EITCIEKKR 582
           EI  +E + 
Sbjct: 482 EIEKLENQH 490


>gi|395785524|ref|ZP_10465256.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella tamiae Th239]
 gi|423717577|ref|ZP_17691767.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella tamiae Th307]
 gi|395425071|gb|EJF91242.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella tamiae Th239]
 gi|395426977|gb|EJF93093.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella tamiae Th307]
          Length = 673

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/588 (55%), Positives = 423/588 (71%), Gaps = 7/588 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGFTDA++MR  QA++ GS + G+LPP+HY+QIF+AHG IMIFF+A P++ GI+N++
Sbjct: 74  MLVRGFTDALLMRSHQALALGSETAGFLPPDHYDQIFSAHGTIMIFFMATPMLFGILNYV 133

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           VPLQ+GARDVAFPF NNL FW+T+ GAIL+ IS  +G F   GWL YPP + +  SP  G
Sbjct: 134 VPLQLGARDVAFPFANNLGFWITAAGAILINISFVMGNFGRGGWLMYPPFTALENSPDTG 193

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N +ATIIKMRAPGM +M MP+F WTAL  NILI+  +PVL
Sbjct: 194 VDYYLWSLQLSGIATTMGAVNFVATIIKMRAPGMTMMKMPVFCWTALVANILILIIYPVL 253

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T  L +   DRY+  +FFTN  G N M+++N +WI+GHPEVY+LV+P FGI SE+V TFS
Sbjct: 254 TVALAMLAGDRYLDMNFFTNTAGANPMVWINFVWIFGHPEVYVLVIPAFGIISEIVPTFS 313

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN+FFGI TMII++PTG K+FNW
Sbjct: 314 SKRLFGYASMVWAVLVILILSCLVWAHHFFTMGGGEIVNSFFGIATMIIAVPTGVKVFNW 373

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GRIRFE P+LW +G M TFV GG+ GV+LAV  A+   HNSLFLVAHFH+ IIG
Sbjct: 374 LFTMYKGRIRFEPPMLWAMGMMFTFVGGGLTGVLLAVVPADMQFHNSLFLVAHFHHTIIG 433

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+   + G+ YWFPKAFG K     G  SFW W +GFY AF PLY +G MG TRRM H+
Sbjct: 434 GVVLSYLGGLAYWFPKAFGVKPNRKLGIASFWCWFVGFYFAFFPLYAVGLMGATRRMQHY 493

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
                  +F +AA G L+I +GIL F++Q++++    Y+ +  L  I  DPW + RTLEW
Sbjct: 494 TREDWAPFFWVAAVGALIILIGILCFVLQILIAIWYGYKHKGKLPVIHNDPWGDSRTLEW 553

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP++   D++W MK+   K     F  I MP N++ GI+ S F L +
Sbjct: 554 SISSPPPAYNFATIPIVQSDDAFWDMKQRGEKRKLKGFDKIHMPSNSSAGIIASAFLLAV 613

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRN-YYISSEEITCIEKK 581
           GFALVWH+W L  +  +   I +  ++ N   + YYIS+ E+  IE +
Sbjct: 614 GFALVWHIWWLAAVGLVGFSITIFAHSLNGDHHGYYISANEVQKIEDE 661


>gi|335419844|ref|ZP_08550888.1| cytochrome-c oxidase [Salinisphaera shabanensis E1L3A]
 gi|335420872|ref|ZP_08551906.1| cytochrome-c oxidase [Salinisphaera shabanensis E1L3A]
 gi|334893618|gb|EGM31828.1| cytochrome-c oxidase [Salinisphaera shabanensis E1L3A]
 gi|334895734|gb|EGM33899.1| cytochrome-c oxidase [Salinisphaera shabanensis E1L3A]
          Length = 678

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/584 (54%), Positives = 434/584 (74%), Gaps = 1/584 (0%)

Query: 2   LFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIVP 61
           L RGF DA M+R QQA +     GYL   H+ ++FT HG +MIFF+AMP + G++N  +P
Sbjct: 55  LLRGFIDAAMVRAQQASAGPGMDGYLEAAHFAELFTGHGTMMIFFMAMPFLVGLMNIAIP 114

Query: 62  LQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVD 121
           LQIGARDV+FP LN +S W+T+    LVMISL +G F+  GW GY P SG+A SPG GVD
Sbjct: 115 LQIGARDVSFPLLNAISVWLTAAAGALVMISLLVGSFSEAGWSGYTPFSGLAHSPGPGVD 174

Query: 122 YYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTS 181
           Y+IW+LQI+GI T L+G+N + TI+K RAPGM LM MP+FTWT LCT+ILIV +FP LT+
Sbjct: 175 YWIWALQISGISTTLTGVNFVTTILKKRAPGMTLMRMPMFTWTVLCTSILIVVSFPALTA 234

Query: 182 VLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSK 241
            L L  LDR +GTHFFT+ +GG+ M+Y+N+ W+WGHPEVYILVLP FGIFSEVV+T+ +K
Sbjct: 235 ALALLALDRSVGTHFFTSIMGGDQMLYINMFWLWGHPEVYILVLPAFGIFSEVVTTYCNK 294

Query: 242 RLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLF 301
           RLFGY+SMV+AT+ I  LS+ VW+HHF+TMG     N+ FGI TM+I+IPTG KI++W++
Sbjct: 295 RLFGYTSMVWATMAIAFLSFGVWVHHFYTMGQDPLRNSIFGIATMVIAIPTGVKIYDWIW 354

Query: 302 TMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGV 361
           TM+RGRI +++P+LWT+GF+ITFV+GGM+GV+LA+P A++ +HNSLFLVAHFHNV+I G 
Sbjct: 355 TMFRGRIEYKLPMLWTLGFLITFVMGGMSGVLLAIPGADYKMHNSLFLVAHFHNVLIPGT 414

Query: 362 LFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFED 421
           +FGL++G  YWFPK FG++L+  WG+ SFW WL+GFYVAF+PLY+LG MG+ RRM  +++
Sbjct: 415 MFGLLAGFYYWFPKVFGFRLDEKWGRHSFWGWLVGFYVAFVPLYMLGIMGMPRRMVTYDN 474

Query: 422 ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPP 481
            +   W  IAA G +++A GI +  +Q+ VS+R R    D+TGDPW GRTLEWS  SPPP
Sbjct: 475 PAWHFWLVIAAIGAIIVAYGIFAMFMQIYVSWRDREKNADLTGDPWGGRTLEWSIPSPPP 534

Query: 482 VYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVW 540
            YNFA +P +   D++  MK N++ + +   ++DI MPK+T + I+I+  S + GFA VW
Sbjct: 535 EYNFAVVPEVRDRDAFMEMKVNDWAYQRPSAYEDIHMPKSTPLAIVIAALSFVFGFAYVW 594

Query: 541 HMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           H+W L  +  + T+  VI  +FN +  + I + E+   E    R
Sbjct: 595 HIWWLAGLCVLGTVAAVIVRSFNDETEFVIPAAEVEADEDAFHR 638


>gi|282891620|ref|ZP_06300109.1| hypothetical protein pah_c186o004 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498483|gb|EFB40813.1| hypothetical protein pah_c186o004 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 656

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/585 (54%), Positives = 414/585 (70%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  +GF DA+MMRLQQA+S G + G++ PEH+ ++F++HG  MIFFV M +V G++N ++
Sbjct: 67  MFCKGFADALMMRLQQALSVGDAHGFISPEHFQEVFSSHGTTMIFFVGMGVVFGLLNLVI 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + GA+L ++SL IG+F+S GWL YPPLSGI  SP  G+
Sbjct: 127 PLQIGARDVAFPFLNALSFWLFASGAMLTLVSLAIGKFSSAGWLAYPPLSGIEYSPDEGI 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW +QI+G+GT LSG+N + TI+ MR PGM  M MPIFTW+ALC+ +L++ AFP+LT
Sbjct: 187 DYWIWVVQISGVGTTLSGVNFLVTILTMRCPGMTFMKMPIFTWSALCSVVLVIFAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFT   GGN MMYVNLIW WGHPEVYIL+LP FGIFSEVV TFS 
Sbjct: 247 ATLAMLTLDRYLGMHFFTAGNGGNPMMYVNLIWAWGHPEVYILILPAFGIFSEVVPTFSE 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+A + I  LS+IVWLHHFFTMG+   VNAFF I TM+I+IPTG KIFNWL
Sbjct: 307 KRLFGYVSMVWALIFIAFLSFIVWLHHFFTMGASPKVNAFFAIMTMLIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT +RGR+ F  P+LW   F++ F +GGM G++L+ P  +F +HNSLFL+AHFH ++IGG
Sbjct: 367 FTKFRGRVHFTSPMLWFFAFVLNFSVGGMTGILLSSPPVDFQVHNSLFLIAHFHGMVIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           +LFG  SG  YWFPK  G+ L     + +FW W  GF +AFMPLY+LGFMG TRR+ H+E
Sbjct: 427 LLFGFFSGFTYWFPKFTGFFLSETLNRYAFWCWFTGFLLAFMPLYMLGFMGATRRLDHYE 486

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
                   F     G L+I  GI   I  L  S  +R T  D TGDPWNGRTLEWS  SP
Sbjct: 487 ASTGWHPLFVTVGIGALVILCGICIQIYGLFKSIAERKTNRDKTGDPWNGRTLEWSIPSP 546

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP+YNFA  P ++  D  W +K+      +  ++DI +PKNT +G+ I + SLI GFA+ 
Sbjct: 547 PPIYNFAITPRVNHRDPLWAIKRGEAPPQEKDYEDIYLPKNTPMGLYIGVLSLIFGFAMT 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++  L I S I  +  VI    +   +  I++ ++  +E   +R
Sbjct: 607 WYISWLAITSLIGIVACVITRLSSEDEHEVITAAQVKQMEDAHLR 651


>gi|338174054|ref|YP_004650864.1| ubiquinol oxidase subunit 1 [Parachlamydia acanthamoebae UV-7]
 gi|336478412|emb|CCB85010.1| ubiquinol oxidase subunit 1 [Parachlamydia acanthamoebae UV-7]
          Length = 656

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/585 (54%), Positives = 414/585 (70%), Gaps = 1/585 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  +GF DA+MMRLQQA+S G + G++ PEH+ ++F++HG  MIFFV M +V G++N ++
Sbjct: 67  MFCKGFADALMMRLQQALSVGDAHGFISPEHFQEVFSSHGTTMIFFVGMGVVFGLLNLVI 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+ + GA+L ++SL IG+F+S GWL YPPLSGI  SP  G+
Sbjct: 127 PLQIGARDVAFPFLNALSFWLFASGAMLTLVSLAIGKFSSAGWLAYPPLSGIEYSPDEGI 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW +QI+G+GT LSG+N + TI+ MR PGM  M MPIFTW+ALC+ +L++ AFP+LT
Sbjct: 187 DYWIWVVQISGVGTTLSGVNFLVTILTMRCPGMTFMKMPIFTWSALCSVVLVIFAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L + TLDRY+G HFFT   GGN MMYVNLIW WGHPEVYIL+LP FGIFSEVV TFS 
Sbjct: 247 ATLAMLTLDRYLGMHFFTAGNGGNPMMYVNLIWAWGHPEVYILILPAFGIFSEVVPTFSE 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+A + I  LS+IVWLHHFFTMG+   VNAFF I TM+I+IPTG KIFNWL
Sbjct: 307 KRLFGYVSMVWALIFIAFLSFIVWLHHFFTMGASPKVNAFFAIMTMLIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT +RGR+ F  P+LW   F++ F +GGM G++L+ P  +F +HNSLFL+AHFH ++IGG
Sbjct: 367 FTKFRGRVHFTSPMLWFFAFVLNFSVGGMTGILLSSPPVDFQVHNSLFLIAHFHGMVIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           +LFG  SG  YWFPK  G+ L     + +FW W  GF +AFMPLY+LGFMG TRR+ H+E
Sbjct: 427 LLFGFFSGFTYWFPKFTGFFLSETLNRYAFWCWFTGFLLAFMPLYMLGFMGATRRLDHYE 486

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
                   F     G L+I  GI   I  L  S  +R T  D TGDPWNGRTLEWS  SP
Sbjct: 487 ASTGWHPLFVTVGIGALVILCGICIQIYGLFKSIAERKTNRDKTGDPWNGRTLEWSIPSP 546

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           PP+YNFA  P ++  D  W +K+      +  ++DI +PKNT +G+ I + SLI GFA+ 
Sbjct: 547 PPIYNFAITPRVNHRDPLWAIKRGEAPPQEKDYEDIYLPKNTPMGLYIGVLSLIFGFAMT 606

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           W++  L I S I  +  VI    +   +  I++ ++  +E   +R
Sbjct: 607 WYISWLAIASLIGIVACVITRLSSEDEHEVITAAQVKQMEDAHLR 651


>gi|395767993|ref|ZP_10448519.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella doshiae NCTC
           12862]
 gi|395413247|gb|EJF79725.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella doshiae NCTC
           12862]
          Length = 672

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/588 (56%), Positives = 426/588 (72%), Gaps = 7/588 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS S GYLPP+H++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSESAGYLPPDHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP + +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFTELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           LFTMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LFTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPKAFGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKAFGYKPNRALGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            + S Q  F IAA G  +I +GIL F++Q++++     + R  L     D W + RTLEW
Sbjct: 493 MEPSWQPMFVIAALGAFIILLGILCFVLQVVLAIWYGIKHRGCLPVTINDSWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA +P +   D++W MKKN ++ P   F  I MP NT+ GI+   FSL++
Sbjct: 553 SISSPPPSYNFAILPEVQSDDAYWNMKKNGYQRPTSGFAKIHMPSNTSAGIIAGFFSLVV 612

Query: 535 GFALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           GFALVWH+W L  I  I     IV ++       YYIS+EE+   E  
Sbjct: 613 GFALVWHIWWLVAIGLIGFVATIVCHSLTGDHHGYYISAEEVQKTEDA 660


>gi|163867420|ref|YP_001608617.1| cytochrome o ubiquinol oxidase subunit I [Bartonella tribocorum CIP
           105476]
 gi|161017064|emb|CAK00622.1| cytochrome o ubiquinol oxidase subunit I [Bartonella tribocorum CIP
           105476]
          Length = 672

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/593 (55%), Positives = 428/593 (72%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADALMMRTHQALALGSETAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP + +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFTELQTSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N IAT+IKMRAPGM +M MP+F W+A  +N+LIV  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSVNFIATMIKMRAPGMTMMRMPVFCWSAFVSNVLIVVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+  +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLNMNFFTNVGGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A VVI +LS +VW HHFFTMG G  VN FF I TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMIWAMVVILILSLLVWGHHFFTMGGGEAVNTFFSIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFL+AHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLIAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPKAFGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKAFGYKPNRMLGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G L+I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFIIAALGALIILLGILCFVLQVVLAIWYGIKHKGHLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA +P I   D++W MKK+ ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPSYNFALLPKIQSDDAYWNMKKSGYQRPTSGFTKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L    ++ F+ TL  V ++       YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAIGLVGFVATL--VCHSLTGDHHGYYIPAEEVQKTEDA 660


>gi|420246225|ref|ZP_14749693.1| heme/copper-type cytochrome/quinol oxidase, subunit 1, partial
           [Rhizobium sp. CF080]
 gi|398042864|gb|EJL35821.1| heme/copper-type cytochrome/quinol oxidase, subunit 1, partial
           [Rhizobium sp. CF080]
          Length = 414

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/413 (76%), Positives = 363/413 (87%)

Query: 103 WLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFT 162
           WL YPPLSG   SPGVGVDYYIW LQ+AGIGT LSGIN+IATI+KMRAPGM  M MPIFT
Sbjct: 1   WLAYPPLSGADYSPGVGVDYYIWGLQVAGIGTTLSGINLIATIVKMRAPGMTFMKMPIFT 60

Query: 163 WTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYI 222
           WT+LCTN+LIVA+FP+LT+ L L +LDRY GT+FFTNDLGGN MMYVNLIWIWGHPEVYI
Sbjct: 61  WTSLCTNVLIVASFPILTATLVLLSLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPEVYI 120

Query: 223 LVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFG 282
           LVLP FGIFSEVV+TF  KRLFGY+SMVYAT VI +LSYIVWLHHFFTMGSGA+VNAFFG
Sbjct: 121 LVLPAFGIFSEVVATFCGKRLFGYASMVYATCVIMILSYIVWLHHFFTMGSGASVNAFFG 180

Query: 283 ITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFL 342
           ITTMIISIPTGAK+FNWLFTMYRGRIR+E+P++WT+GFM+TFVIGGM GV+LAVP A+F+
Sbjct: 181 ITTMIISIPTGAKMFNWLFTMYRGRIRYELPMMWTVGFMVTFVIGGMTGVMLAVPPADFV 240

Query: 343 LHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFM 402
           LHNSLFL+AHFHNVIIGGV+FGLM+G+ YW+PKAFGYKL+ FWGK SFW WLIGFYVAFM
Sbjct: 241 LHNSLFLIAHFHNVIIGGVVFGLMAGVVYWWPKAFGYKLDTFWGKISFWCWLIGFYVAFM 300

Query: 403 PLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDI 462
           PLY+LG MGVTRR+S FED SLQIWF IAAFG ++IA GI +FIIQ++VSY KR  L + 
Sbjct: 301 PLYVLGLMGVTRRVSQFEDPSLQIWFIIAAFGAVIIACGIGAFIIQIVVSYLKRDQLRET 360

Query: 463 TGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDI 515
           +GDPW+GRTLEWSTSSPPP YNFAF P++H  DSW+ MK   ++ P   F+ I
Sbjct: 361 SGDPWDGRTLEWSTSSPPPDYNFAFTPVVHDHDSWYDMKSRGYERPLGGFKPI 413


>gi|421596751|ref|ZP_16040502.1| cytochrome-c oxidase, partial [Bradyrhizobium sp. CCGE-LA001]
 gi|404271138|gb|EJZ35067.1| cytochrome-c oxidase, partial [Bradyrhizobium sp. CCGE-LA001]
          Length = 476

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/401 (79%), Positives = 363/401 (90%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQ ++FG S GYL   HY+Q+FTAHGVIMIFFVAMPLVTG++N++V
Sbjct: 76  MLLRGFADALMMRGQQMLAFGGSEGYLNAHHYDQVFTAHGVIMIFFVAMPLVTGLMNYVV 135

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV+FPFLNN SFWMT GGA+LVM SLFIGEFA TGWL YPPLS I  SP VGV
Sbjct: 136 PLQIGARDVSFPFLNNFSFWMTVGGAVLVMASLFIGEFARTGWLAYPPLSNIGYSPDVGV 195

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQIAG+GT LSGIN+I TI+K+R PGM +M MP+FTWT+LCTNILIVA+FPVLT
Sbjct: 196 DYYIWALQIAGVGTTLSGINLICTIVKLRCPGMTMMKMPVFTWTSLCTNILIVASFPVLT 255

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYILVLP FGIFSEV STFS 
Sbjct: 256 VVLALLSLDRYVGTNFFTNDFGGSPMMYVNLIWIWGHPEVYILVLPAFGIFSEVTSTFSG 315

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIISIPTGAK+FNWL
Sbjct: 316 KRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKMFNWL 375

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR+E+P++WTI FM+TFVIGGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 376 FTMYRGRIRYELPMMWTIAFMLTFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGG 435

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAF 401
           V+FG  +GINYWFPKAFG+KL+PFWGK SFWFW+ GFY+AF
Sbjct: 436 VVFGAFAGINYWFPKAFGFKLDPFWGKMSFWFWVTGFYLAF 476


>gi|389759511|ref|ZP_10191796.1| ubiquinol oxidase subunit I [Rhodanobacter sp. 115]
 gi|388430438|gb|EIL87610.1| ubiquinol oxidase subunit I [Rhodanobacter sp. 115]
          Length = 519

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/498 (61%), Positives = 394/498 (79%), Gaps = 1/498 (0%)

Query: 87  ILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATII 146
           +L+M+SLFIG+F++TGWL YPPLS +  SP VGVDYYIW+LQ+AG+GT LSGIN + TI+
Sbjct: 2   VLIMLSLFIGDFSATGWLAYPPLSELKFSPTVGVDYYIWALQLAGLGTTLSGINFVVTIL 61

Query: 147 KMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIM 206
           +MR PGM LM MP+FTWTAL TNILIVAAFP LT  L L   DRY+G HFFTNDLGGN M
Sbjct: 62  RMRTPGMALMKMPVFTWTALVTNILIVAAFPALTVALALLGADRYLGMHFFTNDLGGNAM 121

Query: 207 MYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLH 266
           MY+NLIWIWGHPEVYIL++P FG++SE++STFS K LFGY SMVYATV I ++S++VWLH
Sbjct: 122 MYINLIWIWGHPEVYILMVPCFGVYSEIISTFSGKPLFGYKSMVYATVAIGVMSFLVWLH 181

Query: 267 HFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVI 326
           HFFTMGSGANVNAFFGI TMIISIPTG K+FNWLFTMYRGRIRF VP+LWTIGFM+TFVI
Sbjct: 182 HFFTMGSGANVNAFFGIATMIISIPTGVKVFNWLFTMYRGRIRFTVPVLWTIGFMVTFVI 241

Query: 327 GGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWG 386
           GGM GV+LAVP A+F+LHNSLFL+AHFHN+IIGGV+FG ++ +N+WFPKA G+KLE  WG
Sbjct: 242 GGMTGVLLAVPGADFVLHNSLFLIAHFHNMIIGGVVFGCLAALNFWFPKAMGFKLEERWG 301

Query: 387 KCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFI 446
           K SFW WL+GFYVAF+PLY+LG MG TRRM H+++ + Q +F +A  G  +I  GI   +
Sbjct: 302 KWSFWCWLVGFYVAFVPLYMLGLMGATRRMQHYDNPAWQPYFVVAFIGAAIIFAGIGFTL 361

Query: 447 IQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFK 506
           +Q++VS R R    D+TGDPW GRTLEW+TSSPPP YNFA +P   + D +W+ K+    
Sbjct: 362 LQIVVSVRNREANRDLTGDPWGGRTLEWATSSPPPFYNFAVLPKGEELDQFWHDKEAGVA 421

Query: 507 FPKD-KFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYK 565
           + +  K++DI MP+NT +G+ +  F +++GF L+WH+W L I+  +  +   +   ++  
Sbjct: 422 YRQPAKYEDIHMPRNTGVGVFMGAFGVLLGFGLIWHIWWLAILGLVGMIGSFLTRAYDRD 481

Query: 566 RNYYISSEEITCIEKKRI 583
            +YY+ + E+  IE+ R+
Sbjct: 482 VDYYVPAAEVEKIERARM 499


>gi|49473793|ref|YP_031835.1| cytochrome o ubiquinol oxidase subunit I [Bartonella quintana str.
           Toulouse]
 gi|49239296|emb|CAF25622.1| Cytochrome o ubiquinol oxidase subunit I [Bartonella quintana str.
           Toulouse]
          Length = 672

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/593 (56%), Positives = 425/593 (71%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T   AIL+ +SL IG F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAAAILINVSLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 AVAFALLACDRYLGMNFFTNAAGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW IG + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCIGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVIFAYLAGLAFWFPKVFGYKPNRALGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F +Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAFIILLGILCFGLQIVLAIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEWSTSSPPP YNFA IP I   D++W MKKN ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWSTSSPPPSYNFAMIPKIQSDDAYWNMKKNGYQRPTSGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L +GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E  
Sbjct: 610 LAVGFALVWHIWWLVAIGLIGFIAT--IVCHSLMGDHHGYYIPAEEVQKTEDA 660


>gi|319407991|emb|CBI81645.1| cytochrome o ubiquinol oxidase subunit I [Bartonella
           schoenbuchensis R1]
          Length = 672

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/589 (56%), Positives = 423/589 (71%), Gaps = 11/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ G+ + GYLPPEH++QIF+AHGVIMIFF+A P++ GI N++
Sbjct: 73  MLVRGFADAIMMRTHQAMALGNETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGIFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T  GAIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAGAILLNISLGVGNFGRGGWLMYPPFSELQSSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM LM MP+F W A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTLMKMPVFCWGAFVSNILILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SE+V TFS
Sbjct: 253 AVAFALLAGDRYLGMNFFTNAAGGNPMVWINYVWIFGHPEVYVLVIPAFGIISEIVPTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGYSSMV+A +VI +LS IVW HHFFTMG G  VN FFG+ TMII+IPTG K+FNW
Sbjct: 313 SKRLFGYSSMVWAILVILILSLIVWGHHFFTMGGGEAVNTFFGVATMIIAIPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G M TFV GG+ GV++A+  A++  HNSLFLV HFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMMFTFVGGGLTGVLMAIVPADWQFHNSLFLVGHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  + G+ +WFPK FG K     G  SFW W IGFYVAF P+YILG MG TRR+ H+
Sbjct: 433 GVVFAYLGGLAFWFPKVFGVKPNRMLGIASFWCWFIGFYVAFFPVYILGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            + S Q  F IAA G  +I +GIL F++Q++++     + +  L   + DPW + RTLEW
Sbjct: 493 IEPSWQPMFIIAAVGAFIILLGILCFVLQVVLAIWYGIKHKGRLPVTSNDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
             SSPPP YNFA IP +   D++W MKKN ++ P   F  I MP NT+ G++  +FSLI+
Sbjct: 553 LASSPPPAYNFAIIPEVQAEDAYWDMKKNGYQRPTSGFTKIHMPSNTSAGVIAGLFSLIV 612

Query: 535 GFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E 
Sbjct: 613 GFALVWHIWWLVAIGVIGFIAT--IVCHSLMGDHHGYYIPAEEVQKTED 659


>gi|395779011|ref|ZP_10459522.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella elizabethae
           Re6043vi]
 gi|423714859|ref|ZP_17689083.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella elizabethae
           F9251]
 gi|395417186|gb|EJF83538.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella elizabethae
           Re6043vi]
 gi|395431078|gb|EJF97106.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella elizabethae
           F9251]
          Length = 672

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/593 (54%), Positives = 426/593 (71%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADALMMRTHQALALGSETAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP + +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFTELQTSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N +AT+IKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAVNFVATMIKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+  +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLSMNFFTNVGGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A VVI +LS +VW HHFFTMG G  VN FF I TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMIWAMVVILILSLLVWGHHFFTMGGGEAVNTFFSIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFL+AHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLIAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRILGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFVIAALGAFIILLGILCFVLQVVLAIWYGIKHKGHLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA +P I   D++W MKK+ ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPAYNFALLPEIKSDDAYWNMKKSGYQRPTSGFTKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L    ++ F+ TL  V ++       YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAIGLVGFVATL--VCHSLTGDHHGYYIPAEEVQKTEDA 660


>gi|403530040|ref|YP_006664569.1| cytochrome o ubiquinol oxidase subunit I [Bartonella quintana
           RM-11]
 gi|403232112|gb|AFR25855.1| cytochrome o ubiquinol oxidase subunit I [Bartonella quintana
           RM-11]
          Length = 672

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/593 (56%), Positives = 426/593 (71%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+  AIL+ +SL IG F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAAAILINVSLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 AVAFALLACDRYLGMNFFTNAAGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW IG + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCIGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVIFAYLAGLAFWFPKVFGYKPNRALGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F +Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAFIILLGILCFGLQIVLAIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEWSTSSPPP YNFA IP I   D++W MKKN ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWSTSSPPPSYNFAMIPKIQSDDAYWNMKKNGYQRPTSGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L +GFALVWH+W L    +I FI T  I+ ++       YYI +EE+   E  
Sbjct: 610 LAVGFALVWHIWWLVAIGLIGFIAT--ILCHSLMGDHHGYYIPAEEVQKTEDA 660


>gi|319403606|emb|CBI77191.1| cytochrome o ubiquinol oxidase subunit I [Bartonella rochalimae
           ATCC BAA-1498]
          Length = 672

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/587 (55%), Positives = 426/587 (72%), Gaps = 7/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++FGS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALAFGSEAAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T   A+L+ ISL IG F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAAAVLINISLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N +ATIIKMRAPGM +M MP+F W+A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSVNFVATIIKMRAPGMTMMKMPVFCWSAFVSNILILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SE+VSTFS
Sbjct: 253 AVAFVLLAADRYLGMNFFTNVAGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEIVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A VVI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYASMIWAIVVILVLSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FG K     G  SFW W IGFY+AF P+Y+LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGIKPNRILGIASFWCWFIGFYLAFFPVYLLGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            +   Q  F +AA G  +I +GIL F++Q++++     + +  L   + DPW + RTLEW
Sbjct: 493 IEPGWQPMFMVAAVGAFIILLGILCFVLQMLLAIWYGIKHKGRLPVTSNDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP +   D++W MKK  ++ P   F  I MP NT+ GI+   FSLI+
Sbjct: 553 SISSPPPSYNFAVIPEVQSEDAYWDMKKRGYQRPTSGFAKIHMPSNTSAGIIAGFFSLIV 612

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTF-NYKRNYYISSEEITCIEK 580
           GFALVWH+W L I+  +  +  +IY++       YYIS+EE+   E 
Sbjct: 613 GFALVWHIWWLVILGLVGFVTTIIYHSLMGDHHGYYISAEEVQKTED 659


>gi|319406523|emb|CBI80165.1| cytochrome o ubiquinol oxidase subunit I [Bartonella sp. 1-1C]
          Length = 672

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/587 (55%), Positives = 426/587 (72%), Gaps = 7/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++FGS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALAFGSEAAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T   A+L+ ISL IG F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAAAVLINISLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N +ATIIKMRAPGM +M MP+F W+A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSVNFVATIIKMRAPGMTMMKMPVFCWSAFVSNILILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SE+VSTFS
Sbjct: 253 AVAFVLLAADRYLGMNFFTNVAGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEIVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A VVI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYASMIWAIVVILVLSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FG K     G  SFW W IGFY+AF P+Y+LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGIKPNRILGIASFWCWFIGFYLAFFPVYLLGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            +   Q  F +AA G  +I +GIL F++Q++++     + +  L   + DPW + RTLEW
Sbjct: 493 IEPGWQPMFMVAAVGAFIILLGILCFVLQMLLAIWYGIKHKGRLPVTSNDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP +   D++W MKK  ++ P   F  I MP NT+ GI+   FSLI+
Sbjct: 553 SISSPPPSYNFAIIPEVRSEDAYWDMKKRGYQRPTSGFAKIHMPSNTSAGIIAGFFSLIV 612

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTF-NYKRNYYISSEEITCIEK 580
           GFALVWH+W L I+  +  +  +IY++       YYIS+EE+   E 
Sbjct: 613 GFALVWHIWWLVILGLVGFVTTIIYHSLMGDHHGYYISAEEVQKTED 659


>gi|46446824|ref|YP_008189.1| cytochrome o ubiquinol oxidase chain I cyoB [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400465|emb|CAF23914.1| probable cytochrome o ubiquinol oxidase chain I cyoB [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 653

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/583 (55%), Positives = 414/583 (71%), Gaps = 2/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M F+GFTDA+M+RLQQA+S G S G++   H+ ++F+AHG  MIFFVAM  V G++N I+
Sbjct: 67  MFFKGFTDALMIRLQQALSVGESQGFISSTHFQEVFSAHGTTMIFFVAMGAVFGLLNLII 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN +SFW+ + GA+L +ISL IG+F+  GWL YPPLS +  SPG GV
Sbjct: 127 PLQIGARDVAFPFLNAVSFWLFTAGAMLTLISLAIGQFSIAGWLAYPPLSALEYSPGEGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW LQI+GIG+ LSGIN + TI+KMR PGM LM MPIF W++LC+ +LI+ AFP+LT
Sbjct: 187 DYWIWMLQISGIGSTLSGINFLVTILKMRCPGMTLMKMPIFVWSSLCSMVLIIFAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + LF+ +LDRY+  HFFT   GGN MMYVNLIW WGHPEVYIL+LP+FG+FSE+V TFS 
Sbjct: 247 ATLFMFSLDRYLDMHFFTTGGGGNPMMYVNLIWAWGHPEVYILILPIFGVFSEIVPTFSE 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY SMV+A V+I   S++VW+HHFFTMG+  +VNA FGI TMII+IPTG KIFNWL
Sbjct: 307 KRLFGYVSMVWALVLIAFFSFVVWVHHFFTMGASPHVNALFGILTMIIAIPTGVKIFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT +RGR+ F  P+LW   F++ F I GM G++LA P  ++ +HNSLFL+AHFH ++IGG
Sbjct: 367 FTKFRGRVHFTSPMLWFFAFLLNFTIAGMTGILLASPPVDYQVHNSLFLIAHFHGMVIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPK  G+ L+    + +FW WL GF +AFMPLY+LGFMG TRR+ H++
Sbjct: 427 VLFGFFAGFTYWFPKFTGFMLDEKLNRYAFWCWLSGFLLAFMPLYMLGFMGATRRLDHYD 486

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT-GDPWNGRTLEWSTSS 478
                   F I AFG  +IA G       L  S + R    D T GDPWNGRTLEWS  S
Sbjct: 487 VSTGWHPLFLIVAFGAFIIACGAFIQFFGLFWSIKNRKKNWDSTGGDPWNGRTLEWSIPS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P P+YNFA IP + Q D +W +K+      K  ++DI +PKNT +   I   SLI GFA+
Sbjct: 547 PVPIYNFAIIPTVDQIDPFWAIKRGVAPEQKKNYEDIYLPKNTPMAFYIGTLSLIFGFAM 606

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            WH+W L + SF+  L  +I    +   +  I+  EI  IE  
Sbjct: 607 TWHIWWLALGSFVGILACLIVRLSHDDPHEVITVAEIKKIEAS 649


>gi|395783594|ref|ZP_10463443.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella melophagi
           K-2C]
 gi|395425716|gb|EJF91876.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella melophagi
           K-2C]
          Length = 672

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/589 (56%), Positives = 421/589 (71%), Gaps = 11/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ G+ + GYLPPEH++QIF+AHGVIMIFF+A P++ GI N++
Sbjct: 73  MLVRGFADAIMMRTHQAMALGNETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGIFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T   AIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAAAILLNISLGVGNFGRGGWLMYPPFSELQSSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM LM MP+F W A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTLMKMPVFCWGAFVSNILIIVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SE+V TFS
Sbjct: 253 AVAFALLAGDRYLGMNFFTNAAGGNPMVWINYVWIFGHPEVYVLVIPAFGIISEIVPTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGYSSMV+A +VI +LS IVW HHFFTMG G  VN FFG+ TMII+IPTG K+FNW
Sbjct: 313 SKRLFGYSSMVWAILVILILSLIVWGHHFFTMGGGEAVNTFFGVATMIIAIPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW IG M TFV GG+ GV++A+  A++  HNSLFLV HFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCIGMMFTFVGGGLTGVLMAIVPADWQFHNSLFLVGHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  + G+ +WFPK FG K     G  SFW W +GFY+AF P+YILG MG TRR+ H+
Sbjct: 433 GVVFAYLGGLAFWFPKVFGVKPNRILGIASFWCWFVGFYIAFFPVYILGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            + S Q  F IAA G  +I +GIL F++Q++++     + +  L   + DPW + RTLEW
Sbjct: 493 IEPSWQPMFIIAAVGAFIILLGILCFVLQVVLAIWYGIKHKGRLPVTSNDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
             SSPPP YNFA IP +   D++W MKKN ++     F  I MP NT+ G++  +FSLI+
Sbjct: 553 LASSPPPAYNFAIIPEVQAEDAYWDMKKNGYQRSTSGFTKIHMPSNTSAGVIAGLFSLII 612

Query: 535 GFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           GFALVWH+W L    +I FI T  IV ++       YYI +EE+   E 
Sbjct: 613 GFALVWHIWWLVAIGVIGFIAT--IVCHSLMGDHHGYYIPAEEVQKTED 659


>gi|49474941|ref|YP_032982.1| cytochrome o ubiquinol oxidase subunit I [Bartonella henselae str.
           Houston-1]
 gi|49237746|emb|CAF26938.1| Cytochrome o ubiquinol oxidase subunit I [Bartonella henselae str.
           Houston-1]
          Length = 672

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/591 (56%), Positives = 427/591 (72%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA + GS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQAFALGSETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFSELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +N+LI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFVATIIKMRAPGMTMMRMPVFCWSAFVSNVLILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 AVAFALLACDRYLGMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFG++SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGHTSMVWAMLVILILSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGF++AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRALGIASFWCWFIGFHLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAFIILLGILCFVLQVVLAIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA IP +   D++W MKKN ++   + F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPSYNFAVIPKVQSDDAYWNMKKNGYQRQINGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L +I FI     IV ++       YYIS+EE+   E  
Sbjct: 610 LVLGFALVWHIWWLVVIGFIGFIATIVCHSLTGDHHGYYISAEEVQKTEDA 660


>gi|395764984|ref|ZP_10445604.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella sp. DB5-6]
 gi|395413801|gb|EJF80263.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella sp. DB5-6]
          Length = 672

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/591 (56%), Positives = 424/591 (71%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGSETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T  GAIL+ ISL IG F   GWL YPP S +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITVAGAILINISLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN +ATIIKMRAPGM +M MP+F W+A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSINFVATIIKMRAPGMTMMKMPVFCWSAFVSNILILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+  +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 AVAFALLACDRYLDMNFFTNVGGGNPMVWINYVWIFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TM++GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMHKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRALGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G ++I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFMIAALGAIIILLGILCFVLQVVLAIWYGIKHKGRLPITLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEWS SSPPP YNFA +P +   D++W MKK+ ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWSISSPPPSYNFAILPRVETDDAYWNMKKDGYQRPTSGFSKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L  I  I     IV ++       YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAIGMIGFVATIVCHSLIGNHHGYYIPAEEVQKTEDA 660


>gi|307069534|ref|YP_003878011.1| putative cytochrome bo terminal oxidase subunit I/cytochrome bo
           terminal oxidase subunit III fusion protein [Candidatus
           Zinderia insecticola CARI]
 gi|306482794|gb|ADM89665.1| putative cytochrome bo terminal oxidase subunit I/cytochrome bo
           terminal oxidase subunit III fusion protein [Candidatus
           Zinderia insecticola CARI]
          Length = 812

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/555 (61%), Positives = 432/555 (77%), Gaps = 17/555 (3%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MM++ Q+ISFG+S G+L P HYNQIFT HGVIMIFFVAMP++ GI+N+I+
Sbjct: 74  MLLRGFIDALMMKIHQSISFGNSRGFLSPNHYNQIFTVHGVIMIFFVAMPIIIGIMNYII 133

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIG++D+AFPFLNNLSFWMT+  A L+MISLF+GEFA TGWL YPPLS I++SP VGV
Sbjct: 134 PLQIGSKDLAFPFLNNLSFWMTTFAAFLIMISLFLGEFAKTGWLAYPPLSEISESPYVGV 193

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWS+QI+GI TL+S IN I TIIK+R P +   NMPIF WT LC+NILI+ +FPVLT
Sbjct: 194 DYYIWSIQISGISTLISSINFIVTIIKLRIPNINFFNMPIFVWTTLCSNILIIISFPVLT 253

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           SVL + +LDR  G HFFTN+LGGN MMY+NLIWIWGHPEVYIL+LP FGIFSE+  TF  
Sbjct: 254 SVLIMLSLDRIFGMHFFTNNLGGNSMMYINLIWIWGHPEVYILILPAFGIFSEITVTFCR 313

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SM++A+++IT+LSYIVWLHHFFTMG G NVN FFGI TMII+IPTG KIFNW+
Sbjct: 314 KKLFGYYSMIFASLIITILSYIVWLHHFFTMGGGPNVNTFFGIATMIIAIPTGVKIFNWI 373

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY G+I FE+P+LWT+ F+ TF IGGMAG+IL++P A++LLHNSLFLVAHFH VIIGG
Sbjct: 374 FTMYYGKITFEIPMLWTLAFITTFSIGGMAGIILSIPPADYLLHNSLFLVAHFHTVIIGG 433

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F + + INYW+PK FGY+L  FWG CSF  W  GFY+ F+P+YILGFMGVTRR++HF 
Sbjct: 434 VVFSIFAAINYWYPKVFGYRLNKFWGLCSFILWTFGFYITFIPIYILGFMGVTRRINHFN 493

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWN-GRTLEWSTSSP 479
           D+SL+IWF+I+ FGT++I +GI+SFIIQ+IVSY  R+       + W   +TLEW+    
Sbjct: 494 DLSLKIWFKISLFGTIIILLGIISFIIQIIVSYLYRNIEKKKIENYWKYSKTLEWNN--- 550

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             + NF             Y+KK N  F  +K ++  + K T  G ++S   +++ F ++
Sbjct: 551 --LKNFK-----------KYIKKENLLFKINKIKNNNIKKKTYNGFILSFLFMLLCFLII 597

Query: 540 WHMWLLTIISFIITL 554
           W ++ L  I  ++T+
Sbjct: 598 WKIFFLFSIILLLTI 612


>gi|319405033|emb|CBI78643.1| cytochrome o ubiquinol oxidase subunit I [Bartonella sp. AR 15-3]
          Length = 672

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/587 (56%), Positives = 426/587 (72%), Gaps = 7/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++FGS + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALAFGSEAAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           VPLQIGARDVAFPF NNL FW+T   A+L+ ISL IG F   GWL YPP S +  SP  G
Sbjct: 133 VPLQIGARDVAFPFANNLGFWITVAAAVLINISLGIGNFGRGGWLMYPPFSELQNSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N +ATIIKMRAPGM +M MPIF W+A  +NILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSVNFVATIIKMRAPGMTMMKMPIFCWSAFVSNILILVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SE+VSTFS
Sbjct: 253 AVAFLLLAADRYLGMNFFTNVAGGNPMVWINYVWVFGHPEVYVLVVPAFGIISEIVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A VVI +LS +VW HHFFTMG G  VN FFGI TMII++PTG K+FNW
Sbjct: 313 SKRLFGYASMIWAIVVILVLSLLVWGHHFFTMGGGEAVNTFFGIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FG K     G  SFW W IGFY AF P+YILG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGIKPNRILGIASFWCWFIGFYFAFFPVYILGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            + S Q  F +AA G  +I +GIL F++Q++++     + +  L   + DPW + RTLEW
Sbjct: 493 IEPSWQPMFMVAAIGAFIILLGILCFVLQMVLAIWYGIKHKGRLPVTSNDPWGDTRTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           S SSPPP YNFA IP +   D++W MKK  ++ P   F  I MP NT  GI+ S FSLI+
Sbjct: 553 SISSPPPSYNFAIIPEVWSEDAYWNMKKKGYQRPTSGFVKIHMPSNTLAGIVASFFSLII 612

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTF-NYKRNYYISSEEITCIEK 580
           GFALVWH+W L I+  +  +  +IY++       YYIS+EE+   E 
Sbjct: 613 GFALVWHIWWLAILGLVGFIATIIYHSLMGDHHGYYISAEEVQKTED 659


>gi|92118912|ref|YP_578641.1| cytochrome-c oxidase [Nitrobacter hamburgensis X14]
 gi|91801806|gb|ABE64181.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Nitrobacter
           hamburgensis X14]
          Length = 658

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/583 (53%), Positives = 414/583 (71%), Gaps = 5/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  DA+M+R QQA +F    GYLPPEH++QIFT+H  IM+FFVAMP V G+ N +V
Sbjct: 68  MLVRGVIDALMIRTQQAFAF-EPHGYLPPEHFDQIFTSHATIMMFFVAMPFVLGLFNIVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGAR +AFPF+N+ S W+T+ GA LVMISL +G+F++  W  YPP SG+  SPGVGV
Sbjct: 127 PQQIGARQMAFPFMNSASLWLTASGAALVMISLVVGKFSTAYWTAYPPQSGVQLSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++ +G +LSG+N + TI+K RAPGM+LM MP+FTWTALCT ILI+ A+P L 
Sbjct: 187 DYWIWAILLSSVGAMLSGLNFLVTIVKRRAPGMRLMMMPLFTWTALCTGILIIFAYPALI 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDR++G HFFT + GGN+  YV+L WIWGHP VYIL+LP FGI+SEVV+TFS 
Sbjct: 247 VAAALLGLDRHLGMHFFTGE-GGNVTNYVSLFWIWGHPHVYILILPAFGIYSEVVATFSG 305

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           +RL GY+ +VY+TV IT LS++VWLHHFFTMGSGA+VNAFFG    +I++PT   I  WL
Sbjct: 306 RRLSGYTPLVYSTVAITALSFVVWLHHFFTMGSGADVNAFFGSAAPLIAVPTVVTIVGWL 365

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TMYRGR++F VP+L+T+GF+ITF++GGM G + AV  ++  +HN+ F VAHFHN++I G
Sbjct: 366 LTMYRGRVQFSVPMLFTLGFVITFLVGGMTGFLFAVAPSD--MHNTTFRVAHFHNLLIPG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKAFG++LE  WG+ +FW W+IGF +AFMPLY+LG MG+ +R++   
Sbjct: 424 ALFGYFAGYQYWFPKAFGFRLEEKWGRRAFWCWIIGFCLAFMPLYVLGLMGMPQRLNRNA 483

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q +  +A FG L I  GI    IQ+ VS R R  L   +GDPWNGRTLEW+T+SPP
Sbjct: 484 VADWQPYLIVAQFGVLFIMCGIACLAIQIAVSIRDRAALAGSSGDPWNGRTLEWATASPP 543

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN-FKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +H  DSWW MK+         +F DI+MP ++  GI++   S +  FA++
Sbjct: 544 AAYNFAVVPQVHGIDSWWTMKQTRAADRGPARFHDIIMPDDSGAGIVLGAMSFVFAFAMI 603

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           W +W L  +  +      +  TF+    + I + E+  IE +R
Sbjct: 604 WQIWWLAAVGGLGMFAAALSQTFHDHAEHRIPASEVEAIESRR 646


>gi|395788248|ref|ZP_10467823.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella birtlesii
           LL-WM9]
 gi|395409581|gb|EJF76169.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella birtlesii
           LL-WM9]
          Length = 672

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/589 (55%), Positives = 424/589 (71%), Gaps = 11/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFG-SSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ G  + GYLPPEH++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGGETAGYLPPEHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GA+L+ ISL IG F   GWL YPP + +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAVLINISLGIGNFGRGGWLMYPPFTELQTSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N IATIIKMRAPGM +M MP+F W+A  +N+LIV  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAVNFIATIIKMRAPGMTMMRMPVFCWSAFVSNVLIVVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+  +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVTFALLACDRYLDMNFFTNVGGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SMV+A +VI +LS +VW HHFFTMG G  VN FF I TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMVWAMLVILILSLLVWGHHFFTMGGGEAVNTFFSIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFL+AHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLIAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W +GFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRLLGIASFWCWFVGFYLAFFPVYGLGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS----YRKRHTLIDITGDPW-NGRTLEW 474
            + S Q  F IAA G  +I +GIL F++Q++++     + +  L     D W +GRTLEW
Sbjct: 493 TEPSWQPMFIIAAVGACIILLGILCFVLQVVLAIWYGIKHKGRLPVTVNDSWGDGRTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
             SSPPP YNFA +P +   D++W MKKN ++ P   F  I MP NT+ GI+   FSL++
Sbjct: 553 LASSPPPAYNFAILPKVGSDDAYWNMKKNGYQRPTSGFTKIHMPSNTSAGIIAGFFSLVV 612

Query: 535 GFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           GFALVWH+W L    +I F+ TL  V ++       YYIS+EE+   E 
Sbjct: 613 GFALVWHIWWLAAVGLIGFVTTL--VCHSLTGDHHGYYISAEEVQKTED 659


>gi|315125953|ref|YP_004067956.1| ubiquinol oxidase subunit 1 [Pseudoalteromonas sp. SM9913]
 gi|315014467|gb|ADT67805.1| ubiquinol oxidase subunit 1 [Pseudoalteromonas sp. SM9913]
          Length = 526

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/514 (60%), Positives = 388/514 (75%), Gaps = 1/514 (0%)

Query: 71  FPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIA 130
           F FLNNLSFW T+ GAIL+ +SL  GEFA TGW+ YPPLS +  SPGVGVDYYIW+LQI+
Sbjct: 4   FHFLNNLSFWFTASGAILINLSLIFGEFAKTGWVAYPPLSELTFSPGVGVDYYIWALQIS 63

Query: 131 GIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDR 190
           G+GTLL+ +N + T+ KMRAPGM LM MPIFTW     NILI A+FP+LT+VL + TLDR
Sbjct: 64  GLGTLLTAVNFLVTVFKMRAPGMTLMKMPIFTWACTWANILIAASFPILTAVLAMLTLDR 123

Query: 191 YIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMV 250
           Y+  HFFTN+ GGN MMY+NL W WGHPEVYILVLP FGIFSE+VSTF+ KRLFGY SMV
Sbjct: 124 YLDFHFFTNEAGGNAMMYINLFWAWGHPEVYILVLPAFGIFSEIVSTFTGKRLFGYKSMV 183

Query: 251 YATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRF 310
           YA+  I++L +IVWLHHFFTMGS ANVNAFFG+ TM+I++PTG K+F+WLFT+YRGR+R 
Sbjct: 184 YASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFSWLFTIYRGRLRI 243

Query: 311 EVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGIN 370
            VP+LWT+GFM+TF IGGM GV+LA+P A+++LHNSLFL+AHFHN IIGG +FG ++G  
Sbjct: 244 TVPVLWTLGFMVTFSIGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGFV 303

Query: 371 YWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQI 430
           +WFPKA G+KL+  WGK SFW WLIGF+VAFMPLY+LGF+G+TRR++H  +    IW  I
Sbjct: 304 FWFPKAMGFKLDERWGKASFWCWLIGFFVAFMPLYVLGFLGMTRRLNHSNNPDWNIWLYI 363

Query: 431 AAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPL 490
           AA G ++I  GI+  +IQL VS++ R  L D TGDPWNG TLEWSTSSPP  YNFA IP 
Sbjct: 364 AAVGAVIIMFGIICQVIQLYVSFKNREALDDTTGDPWNGHTLEWSTSSPPQYYNFAEIPH 423

Query: 491 IHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIIS 549
           +   D+W  MK+    +  K  +  I MPKNT  G+LI+       FA++WH+W L  + 
Sbjct: 424 VDDIDTWTDMKEKGLAYQGKSSYSPIHMPKNTASGVLIAASLTAFCFAMIWHIWWLAGLG 483

Query: 550 FIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           FI  + + I   +    +YY+ ++EI  IE   I
Sbjct: 484 FIGAIALFINRAYTSDVDYYVQNDEILQIEGAHI 517


>gi|393722106|ref|ZP_10342033.1| cytochrome-c oxidase [Sphingomonas sp. PAMC 26605]
          Length = 684

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/582 (52%), Positives = 419/582 (71%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML R   +A++MRLQQA +     G++ PEH+ Q+F+ HG IMIFFVAMPL+TG+INF +
Sbjct: 74  MLARALVEAILMRLQQADAVNQP-GFVEPEHFAQLFSTHGTIMIFFVAMPLLTGVINFAM 132

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN++S  +T  GA L+M +L +G F++ GW GYPP +GIA SPGVG 
Sbjct: 133 PLQIGARDVAFPLLNSISLCLTWAGAWLMMAALVLGRFSTGGWTGYPPYTGIAFSPGVGP 192

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ +A IG+LL+GIN   T+ K RAPGM   +MP+F WTALCT+IL++ A P LT
Sbjct: 193 DYWIWAVTLASIGSLLTGINFAVTLYKGRAPGMTWFHMPLFCWTALCTSILLIFAIPPLT 252

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDRY G HFFTN+ GGN+M Y NL W++GHPEVYIL+LP FG++SEV++TFSS
Sbjct: 253 VATGLLALDRYAGMHFFTNEAGGNVMNYANLFWLFGHPEVYILILPAFGVYSEVIATFSS 312

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY S+V AT+ I +LS+ VWLHHFFTMG  A+VNA FGI TM+I IPTG K+++W+
Sbjct: 313 KRLFGYVSLVCATMAIAVLSFTVWLHHFFTMGQSADVNAAFGIATMLIGIPTGVKVYDWI 372

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           +TM+RGRIRF VP+L+++ F++TFVIGGM G+ILA+P  +++ HN++FLVAHFHN++I G
Sbjct: 373 WTMFRGRIRFTVPMLYSLAFIVTFVIGGMTGIILAMPPLDYVTHNTVFLVAHFHNMLIPG 432

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           +LF +++  +YWFPKAFGY+L  FWG+ S   W+ GFY+AFMPLY+LG   + RR     
Sbjct: 433 LLFAMLAAYHYWFPKAFGYRLNEFWGRVSCACWVGGFYLAFMPLYVLGLEAMPRRSQQVS 492

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  IAAFG L++     +  IQL VS R R       GDPW+ R LEW+ S+PP
Sbjct: 493 EAAYQPWLLIAAFGGLVLFCAFAALAIQLWVSIRDRDQNRVAVGDPWDARGLEWAISAPP 552

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H  D++W  K++ F + P D ++ I MP+N+ +G +I +      F LV
Sbjct: 553 PEYNFAVVPQVHGRDAFWQAKQDGFAYAPPDSYEAIEMPRNSAVGPVIGLAGAGCAFGLV 612

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L ++   + +  VI  +F    +  IS++E+   E +
Sbjct: 613 WHIWWLALLGLAVAIGAVIARSFVRDTHRVISADEVAATEAR 654


>gi|240849794|ref|YP_002971182.1| cytochrome o ubiquinol oxidase subunit I [Bartonella grahamii
           as4aup]
 gi|240266917|gb|ACS50505.1| cytochrome o ubiquinol oxidase subunit I [Bartonella grahamii
           as4aup]
          Length = 672

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/593 (55%), Positives = 424/593 (71%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS S GYLPP+H++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADALMMRTHQALALGSESAGYLPPDHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL +G F   GWL YPP + +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLGVGNFGRGGWLMYPPFTELQTSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN IATIIKMRAPGM +M MPIF W+A  +N+LIV  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSINFIATIIKMRAPGMTMMKMPIFCWSAFVSNVLIVVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L + DRY+  +FFTN  GGN M+++N +W++GHPEVY+L +P FGI SEVVSTFS
Sbjct: 253 AVTFALLSCDRYLNMNFFTNVAGGNPMVWINYVWVFGHPEVYVLAVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A +VI +LS +VW HHFFTMG G  VN  F I TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMIWAMLVILILSLLVWGHHFFTMGGGEAVNTSFSIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRILGIASFWCWFIGFYLAFFPVYALGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFIIAALGAFIILLGILCFVLQVVLAIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEWS SSPPP YNFA +P I   D++W MKK+ ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWSISSPPPSYNFAIVPKIQSDDAYWNMKKSGYQRPTSGFTKIHMPSNTSAGIIAGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L    +I FI TL  V ++       YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAVGLIGFIATL--VCHSLTGDHHGYYIPAEEVQKTEDA 660


>gi|451940166|ref|YP_007460804.1| cytochrome o ubiquinol oxidase subunit I [Bartonella australis
           Aust/NH1]
 gi|451899553|gb|AGF74016.1| cytochrome o ubiquinol oxidase subunit I [Bartonella australis
           Aust/NH1]
          Length = 672

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/588 (55%), Positives = 422/588 (71%), Gaps = 7/588 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFG-SSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ G  + GYLPPEH++QIF+AHGVIMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADAIMMRTHQALALGDETAGYLPPEHFDQIFSAHGVIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           VPLQIGARDVAFPF NNL FW+T+ GA+L+ ISL IG F   GWL YPP S +  SP  G
Sbjct: 133 VPLQIGARDVAFPFANNLGFWITAAGAVLINISLGIGNFGRGGWLMYPPFSELQGSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  IN IATIIKMRAPGM +M MP+F W A  TNILI+  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGAINFIATIIKMRAPGMTMMRMPVFCWAAFVTNILILIIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
                L   DRY+G +FFTN  GGN M+++N +WI+GHPEVY+LV+P FGI SE+V TFS
Sbjct: 253 AVAFALLAGDRYLGMNFFTNTAGGNPMVWINYVWIFGHPEVYVLVIPAFGIVSEIVPTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGYSSMV+A +VI +LS +VW HHFFTMG G  VN FF + TMII++PTG K+FNW
Sbjct: 313 SKRLFGYSSMVWAILVILVLSLLVWGHHFFTMGGGEAVNTFFSVATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV++++  A++  HNSLFLVAHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMLFTFVGGGLTGVLMSIVPADWQFHNSLFLVAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPKAFG K     G  SFW W IGFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVIFSYLAGLAFWFPKAFGVKPNRVLGIASFWCWFIGFYLAFFPVYTLGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSY----RKRHTLIDITGDPW-NGRTLEW 474
            + S Q  F IAA G  +I +GIL F++Q++++     + +  L   + DPW + RTLEW
Sbjct: 493 IEPSWQPMFIIAAAGACIILLGILCFVLQIVLAVWYGIKHKGRLPITSNDPWGDARTLEW 552

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           STSSPPP YNFA IP +   D++W MKK  ++ P   F  I MP NT+ G++   FSLI+
Sbjct: 553 STSSPPPSYNFAIIPEVQTEDAYWDMKKRGYQRPISGFTKIHMPSNTSAGVIAGFFSLIV 612

Query: 535 GFALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           GFALVWH+W L  I  +     I+ ++       YYIS+EE+   E  
Sbjct: 613 GFALVWHIWWLAAIGLVGFAATIIGHSLVGDHHGYYISAEEVQKTEDA 660


>gi|395782279|ref|ZP_10462683.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella
           rattimassiliensis 15908]
 gi|395419218|gb|EJF85519.1| cytochrome o ubiquinol oxidase, subunit I [Bartonella
           rattimassiliensis 15908]
          Length = 672

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/593 (54%), Positives = 425/593 (71%), Gaps = 17/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS-SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFI 59
           ML RGF DA+MMR  QA++ GS + GYLPP+H++QIF+AHG IMIFF+A P++ G+ N++
Sbjct: 73  MLVRGFADALMMRTHQALALGSETAGYLPPDHFDQIFSAHGTIMIFFMATPILFGLFNYL 132

Query: 60  VPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVG 119
           +PLQIGARDVAFPF NNL FW+T+ GAIL+ ISL IG F   GWL YPP + +  SP  G
Sbjct: 133 IPLQIGARDVAFPFANNLGFWITAAGAILINISLAIGNFGRGGWLMYPPFTELQMSPDTG 192

Query: 120 VDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVL 179
           VDYY+WSLQ++GI T +  +N IAT+IKMRAPGM +M MP+F W+A  +N+LIV  +PVL
Sbjct: 193 VDYYLWSLQLSGIATTMGSVNFIATMIKMRAPGMTMMRMPVFCWSAFVSNVLIVVIYPVL 252

Query: 180 TSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFS 239
           T    L   DRY+  +FFTN  GGN M+++N +W++GHPEVY+LV+P FGI SEVVSTFS
Sbjct: 253 TVAFALLACDRYLSMNFFTNVGGGNPMVWINYVWVFGHPEVYVLVVPAFGIVSEVVSTFS 312

Query: 240 SKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNW 299
           SKRLFGY+SM++A +VI +LS +VW HHFFTMG G  VN FF I TMII++PTG K+FNW
Sbjct: 313 SKRLFGYTSMIWAMLVILILSLLVWGHHFFTMGGGEAVNTFFSIATMIIAVPTGVKVFNW 372

Query: 300 LFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIG 359
           L TMY+GRIRFE P+LW +G + TFV GG+ GV+L++  A++  HNSLFL+AHFH+ IIG
Sbjct: 373 LLTMYKGRIRFEPPMLWCMGMIFTFVGGGLTGVLLSIVPADWQFHNSLFLIAHFHHTIIG 432

Query: 360 GVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF 419
           GV+F  ++G+ +WFPK FGYK     G  SFW W +GFY+AF P+Y LG MG TRR+ H+
Sbjct: 433 GVVFAYLAGLAFWFPKVFGYKPNRILGIASFWCWFLGFYLAFFPIYGLGLMGATRRLQHY 492

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRH------TLIDITGDPWNGRT 471
            + S Q  F IAA G  +I +GIL F++Q++++  Y  +H      TL D  GD    RT
Sbjct: 493 MEPSWQPMFIIAALGAFIILLGILCFVLQVVLAIWYGIKHKGRLPVTLNDSWGD---ART 549

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFS 531
           LEW TSSPPP YNFA +P I   D++W MKK  ++ P   F  I MP NT+ GI+   FS
Sbjct: 550 LEWFTSSPPPSYNFAILPKIQSDDAYWNMKKGGYQRPTSGFTKIHMPSNTSAGIITGFFS 609

Query: 532 LIMGFALVWHMWLLT---IISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           L++GFALVWH+W L    +I F+ TL  V ++       YYI +EE+   E  
Sbjct: 610 LVVGFALVWHIWWLVAVGLIGFVATL--VCHSLIGDHHGYYIPAEEVQKTEDA 660


>gi|409399167|ref|ZP_11249511.1| cytochrome-c oxidase [Acidocella sp. MX-AZ02]
 gi|409131624|gb|EKN01318.1| cytochrome-c oxidase [Acidocella sp. MX-AZ02]
          Length = 694

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/582 (52%), Positives = 424/582 (72%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+ RG  + V+MR+QQ ++  +  G L P+H+ Q F+ HG IMIFFV MPL++G++NF +
Sbjct: 85  MIVRGVIEGVLMRVQQDLAVNAP-GILAPDHFAQFFSTHGTIMIFFVVMPLISGLVNFAM 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN++  W++ GGA+LVM+SL IGEF++ GW GYPP + +A + GVG 
Sbjct: 144 PLQIGARDVAFPFLNSVGLWLSVGGAVLVMVSLVIGEFSTGGWSGYPPYTELAFNGGVGP 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++ +  +L+G+N   TI K+RAPGM  M +P+F+WTALCT IL++ A P LT
Sbjct: 204 DYWIWAVTMSSLSAMLTGLNFAVTIYKLRAPGMSWMRLPLFSWTALCTAILMIFAMPPLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L   DRY+G HFFTNDLGGN+M YVNL W++GHPEVYIL+LP FG++SEVVS +SS
Sbjct: 264 VATLLLAADRYLGMHFFTNDLGGNMMNYVNLFWLFGHPEVYILILPPFGVYSEVVSAYSS 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K L+GY S+V AT+ I +LS+ VWLHHFFTMG  ANVNAFFGI TM+I IPTG K++NW 
Sbjct: 324 KELYGYVSLVIATMAIAVLSFTVWLHHFFTMGQSANVNAFFGIATMLIGIPTGVKLYNWT 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           +TM+RGR+R+  P+L+T+ F+ITFVIGG++G+ILA P  ++++HN+LFLVAHFHN++I G
Sbjct: 384 WTMFRGRVRYTAPMLFTLAFLITFVIGGLSGIILATPPLDYMMHNTLFLVAHFHNMLIPG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG+++G  YWFPKAFG++LE  WGK + +FW++GFY+AFMPLY+LG  G TRR   F 
Sbjct: 444 TLFGMIAGCQYWFPKAFGFRLEEKWGKRAVFFWVVGFYMAFMPLYVLGADGATRRTVEFS 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + Q W  +A  G  LI  G+ S  IQ+ VS +KR  L    GDPW+ R LEWS S+PP
Sbjct: 504 NPAFQPWLLLAMCGGFLILAGLASLFIQVWVSVKKRDMLAVPVGDPWDARGLEWSISAPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNF  IP +   D++++ K+N+  + P D ++DI MPKNT  G++  +   +  F LV
Sbjct: 564 PEYNFVSIPQVGHRDAFYWRKRNHGAYKPADHYRDIEMPKNTGWGLIFGLGMAVCFFGLV 623

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W + I+  ++++   +  +F    +  I + EI   ++ 
Sbjct: 624 WHIWWMAILFGLLSIAAGLVRSFQRDLHKIIPAAEIEAQDRH 665


>gi|337751398|ref|YP_004645560.1| protein QoxB [Paenibacillus mucilaginosus KNP414]
 gi|379724376|ref|YP_005316507.1| protein QoxB [Paenibacillus mucilaginosus 3016]
 gi|386727105|ref|YP_006193431.1| protein QoxB [Paenibacillus mucilaginosus K02]
 gi|336302587|gb|AEI45690.1| QoxB [Paenibacillus mucilaginosus KNP414]
 gi|378573048|gb|AFC33358.1| QoxB [Paenibacillus mucilaginosus 3016]
 gi|384094230|gb|AFH65666.1| protein QoxB [Paenibacillus mucilaginosus K02]
          Length = 658

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/585 (55%), Positives = 411/585 (70%), Gaps = 11/585 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MRLQ A+       +L PEHYNQIFT HGVIMI F+AMPL+ G+ N I+
Sbjct: 71  MLFRGGVDALLMRLQLAVPNAE---FLHPEHYNQIFTTHGVIMILFMAMPLMFGLFNVIM 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  +S  IG     GWL YPPLSG+  SPGVG 
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFFFGAMLFNVSFIIGGSPDAGWLAYPPLSGLEHSPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TI+KMRAPGM LM MP+FTW+   + I+I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTILKMRAPGMTLMKMPMFTWSVFSSCIIIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR++G HFFT D GGN MMY+NLIW+WGHPEVYI++LP FGIFSE+V+TFS 
Sbjct: 248 VTLALLFLDRFLGAHFFTLDGGGNPMMYINLIWMWGHPEVYIVILPAFGIFSEIVATFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV+A ++I++LS+  W+HHFFTMGSGA+VN FF ITTM I+IPTGAK+FNWL
Sbjct: 308 KTLFGYKSMVFAMLIISVLSFFTWVHHFFTMGSGADVNVFFAITTMAIAIPTGAKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI+F  P+LWTI F+  FVIGGM GV+L+V  A+F  HNS FL+AHFH V+IGG
Sbjct: 368 FTMYRGRIKFTTPMLWTIAFIPCFVIGGMTGVLLSVAPADFQFHNSYFLIAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG  +G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LG  G+TRR+S ++
Sbjct: 428 VAFGYFAGLYYWWPKMFGFKLNEHLGKWAFWLWNIGFYVCFMPQYFLGLDGMTRRVSTYD 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+       ++  G  L+ +G +  + Q  ++Y  +H   D+TGDPW+GRTLEWS  SP
Sbjct: 488 FDMGWGSLNMVSTVGGFLMGIGFIFQVWQ--IAYSIKHHEKDVTGDPWDGRTLEWSIPSP 545

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNN-----FKFPKDKFQDILMPKNTNIGILISIFSLIM 534
            PVYNFA  P +   D WW  K+        K P+  ++ I MPKN+ I  + S     +
Sbjct: 546 APVYNFAVTPHVEHVDDWWETKQKRAAAGAAKEPRPVYEPIHMPKNSAIPFVKSALWFFV 605

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           GF  VW    + I + I   I ++  +F Y  +YYI  +EI   E
Sbjct: 606 GFGFVWDWMWMAIPALIGVGICMLARSFTYDDDYYIQVDEIERTE 650


>gi|297620728|ref|YP_003708865.1| cytochrome o ubiquinol oxidase, subunit I [Waddlia chondrophila WSU
           86-1044]
 gi|297376029|gb|ADI37859.1| cytochrome o ubiquinol oxidase, subunit I [Waddlia chondrophila WSU
           86-1044]
 gi|337294035|emb|CCB92021.1| Ubiquinol oxidase subunit 1 [Waddlia chondrophila 2032/99]
          Length = 656

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/583 (53%), Positives = 417/583 (71%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  +GF DA+MMR+QQA + G++  +L  EH+ ++F+AHG  MIFFVAM  + GI+N I+
Sbjct: 68  MFLKGFADAMMMRIQQATATGAANPFLTSEHFQEVFSAHGATMIFFVAMGFMFGIMNLII 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFPFLN +SFW+ + G +L++ISL IG F+ +GWL YPPLS +A SP  GV
Sbjct: 128 PLQIGARDLAFPFLNAVSFWLFAAGGMLILISLGIGHFSVSGWLAYPPLSEVAYSPNEGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+ WS+QI+GIG+  SGIN + TI+KMR PGM LM MPIF W++LC  +L++ AFP+LT
Sbjct: 188 DYWAWSVQISGIGSTFSGINFLVTILKMRCPGMTLMKMPIFVWSSLCAMVLVIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + + L  LDRY+G HFFT   GGN M+Y NLIW WGHPEVYIL+LP FGIFSEVV TFS 
Sbjct: 248 ATVGLLMLDRYLGMHFFTASGGGNPMLYFNLIWAWGHPEVYILILPAFGIFSEVVPTFSE 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+SMV+A V+I  LS++VWLHHFFTMG+  +VN FF + TM+++IPTG KIFNWL
Sbjct: 308 KRLFGYTSMVWAMVLIAFLSFLVWLHHFFTMGASPSVNTFFSVMTMLVAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT YRG++ F  P+LW   F++ F I GM G++LA P  +F +HNSLFL+AHFH ++IGG
Sbjct: 368 FTKYRGKVHFTSPMLWFFSFVLNFSIAGMTGILLAAPPVDFQVHNSLFLIAHFHGMVIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPK  G+ +     + +F+ W  GF +AFMPLY+LGFMG TRR+ H++
Sbjct: 428 VLFGFFAGFTYWFPKYTGFFISERLNRWAFFCWFAGFLLAFMPLYMLGFMGATRRLDHYD 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDIT-GDPWNGRTLEWSTSS 478
                Q  F IAA G ++I +G L   + L  S  KR   +D T G+PWNGRTLEW+T S
Sbjct: 488 PSTGWQPLFVIAAMGGVIIFIGALIQFVGLFWSIYKRKDNMDTTGGNPWNGRTLEWATHS 547

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PPP+YNFA IP I+Q D  W  K    +  K +++DI +P NT I   I   S+++GFA+
Sbjct: 548 PPPIYNFAVIPTINQRDPLWAEKPATEE--KPEYEDIHLPANTPISFYIGALSMVLGFAM 605

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
            W ++ L ++SF   L ++I    +   ++ IS+EE+  IE+ 
Sbjct: 606 TWQIYWLGVLSFAGILGLIIARLSSKDEHFTISAEEVKKIEES 648


>gi|315646199|ref|ZP_07899319.1| quinol oxidase polypeptide I [Paenibacillus vortex V453]
 gi|315278398|gb|EFU41714.1| quinol oxidase polypeptide I [Paenibacillus vortex V453]
          Length = 657

 Score =  639 bits (1648), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/586 (54%), Positives = 426/586 (72%), Gaps = 14/586 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q A+       +LPP+HYNQIFT HGVIMI F+AMP + G+ N +V
Sbjct: 71  MLFRGGVDALLMRAQLAMP---ELNFLPPDHYNQIFTTHGVIMILFMAMPFMFGLFNIMV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVA+PFLN+LSFW+   GA+L  +S  IG     GWL YPP SG   +PGVG 
Sbjct: 128 PLQLGARDVAYPFLNSLSFWLFFSGAMLFNLSFVIGGSPDAGWLAYPPYSGTMYNPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+G+G+L++GIN + TI+KMRAPGMKLM MP+F+W+ L + I I+ +FP+LT
Sbjct: 188 DFYIWGIQISGLGSLMTGINFLVTILKMRAPGMKLMKMPMFSWSVLSSCIAIIFSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGIFSE+VSTFS 
Sbjct: 248 ATLALLFLDRYAGAHFFTLDGGGNPMMYINLIWMWGHPEVYIIVLPAFGIFSEIVSTFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A ++I++LS++VW HHFFTMGSGA+VNAFF +TTM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVWAMMIISVLSFLVWAHHFFTMGSGADVNAFFALTTMLIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI FE P+LWTIGF+  F++GG+ GV+L+V  A+F  HNS FLVAHFH VIIGG
Sbjct: 368 FTMFRGRITFETPMLWTIGFIPCFIVGGLTGVLLSVAPADFQFHNSYFLVAHFHQVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+ L    GK +FWFW IGFY  FMP Y+LG MG+TRR+  + 
Sbjct: 428 VVFGYFAGLYYWWPKMFGFTLNERIGKWAFWFWNIGFYCCFMPQYVLGLMGMTRRVVTYS 487

Query: 421 DISLQIWFQ---IAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTS 477
               + W++   ++  G +L+A+  L  + Q++  ++ +    D TGDPWNGRTLEWS  
Sbjct: 488 --WDKGWWELNLVSTIGAVLMAIAFLFQVWQIVDGFKHQAKNRDTTGDPWNGRTLEWSIP 545

Query: 478 SPPPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMG 535
           SP PVYNFA +P   + D WW  K++    +  K K + I MPKN+ + I++S F  I G
Sbjct: 546 SPAPVYNFAVLPNASRQDEWWEQKQSAGAHQAIKQKLEPIHMPKNSGVPIVMSAFWFIAG 605

Query: 536 FALV--WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           F  +  W  ++ T ++ ++  +  +Y++FNY  +YYI  +EI   E
Sbjct: 606 FGFIFDWTGFIYTGLAGVVGCL--VYHSFNYDTDYYIPVDEIERTE 649


>gi|417324506|ref|ZP_12110754.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Adelaide str. A4-669]
 gi|417363834|ref|ZP_12136944.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Hvittingfoss str. A4-620]
 gi|417388722|ref|ZP_12152764.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Minnesota str. A4-603]
 gi|353578816|gb|EHC40537.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Adelaide str. A4-669]
 gi|353599232|gb|EHC55463.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Hvittingfoss str. A4-620]
 gi|353624615|gb|EHC73607.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Minnesota str. A4-603]
          Length = 502

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 305/489 (62%), Positives = 390/489 (79%), Gaps = 1/489 (0%)

Query: 95  IGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMK 154
           +GEFA TGWL YPPLSGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPGM 
Sbjct: 1   MGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMT 60

Query: 155 LMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWI 214
           +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW 
Sbjct: 61  MFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWA 120

Query: 215 WGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSG 274
           WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+G
Sbjct: 121 WGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAG 180

Query: 275 ANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVIL 334
           ANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV+L
Sbjct: 181 ANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLL 240

Query: 335 AVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWL 394
           AVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+
Sbjct: 241 AVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWI 300

Query: 395 IGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYR 454
           IGF+VAFMPLY+LGFMG+TRR+S   D        +AA G  LIA+GIL  +IQ+ VS R
Sbjct: 301 IGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVSIR 360

Query: 455 KRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQ 513
            R    D+TGDPW GRTLEWSTSSPPP YNFA +P +H+ D++W MK+    + +  +++
Sbjct: 361 DRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYE 420

Query: 514 DILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSE 573
           +I MPKN+  GI+I+ F+ + GFA++WH+W L I+ F   +I  I  +F+   +YY+   
Sbjct: 421 EIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVP 480

Query: 574 EITCIEKKR 582
           E+  +E + 
Sbjct: 481 EVEKLENQH 489


>gi|417406166|ref|ZP_12157826.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Mississippi str. A4-633]
 gi|353628141|gb|EHC76277.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Mississippi str. A4-633]
          Length = 502

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 305/489 (62%), Positives = 390/489 (79%), Gaps = 1/489 (0%)

Query: 95  IGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMK 154
           +GEFA TGWL YPPLSGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPGM 
Sbjct: 1   MGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMT 60

Query: 155 LMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWI 214
           +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW 
Sbjct: 61  MFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWA 120

Query: 215 WGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSG 274
           WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+G
Sbjct: 121 WGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAG 180

Query: 275 ANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVIL 334
           ANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV+L
Sbjct: 181 ANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLL 240

Query: 335 AVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWL 394
           AVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+
Sbjct: 241 AVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWI 300

Query: 395 IGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYR 454
           IGF+VAFMPLY+LGFMG+TRR+S   D        +AA G  LIA+GIL  +IQ+ VS R
Sbjct: 301 IGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVSIR 360

Query: 455 KRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQ 513
            R    D+TGDPW GRTLEWSTSSPPP YNFA +P +H+ D++W MK+    + +  +++
Sbjct: 361 DRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYE 420

Query: 514 DILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSE 573
           +I MPKN+  GI+I+ F+ + GFA++WH+W L I+ F   +I  I  +F+   +YY+   
Sbjct: 421 EIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVP 480

Query: 574 EITCIEKKR 582
           E+  +E + 
Sbjct: 481 EVEKLESQH 489


>gi|420591053|ref|ZP_15084518.1| ubiquinol oxidase subunit 1, partial [Yersinia pestis PY-09]
 gi|391458139|gb|EIR17024.1| ubiquinol oxidase subunit 1, partial [Yersinia pestis PY-09]
          Length = 492

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 304/475 (64%), Positives = 377/475 (79%), Gaps = 1/475 (0%)

Query: 107 PPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTAL 166
           PPLSGI  SPGVGVDY+IWSLQI+G+GTLL+G+N  ATI+KMRAPGM +M MP+FTW A 
Sbjct: 3   PPLSGIEYSPGVGVDYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSMMKMPVFTWAAF 62

Query: 167 CTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLP 226
           CTNILI+ +FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLP
Sbjct: 63  CTNILIIVSFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLP 122

Query: 227 VFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTM 286
           VFG+FSEV +TFS KRLFGY+S+V+AT+ IT+LS+IVWLHHFFTMGSGANVNAFFGI TM
Sbjct: 123 VFGVFSEVTATFSRKRLFGYTSLVWATIAITVLSFIVWLHHFFTMGSGANVNAFFGIATM 182

Query: 287 IISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNS 346
           IISIPTG KIFNWLFTMY+GRI+    +LWTIGF++TF IGGM GV+LAVP ANF+LHNS
Sbjct: 183 IISIPTGVKIFNWLFTMYQGRIQINSAMLWTIGFIVTFSIGGMTGVLLAVPGANFVLHNS 242

Query: 347 LFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYI 406
           LFL+AHFHNVIIGGV+FG  +G+ YW+PK+FG+ L   WG  +FWFW+IGF+VAFMPLY+
Sbjct: 243 LFLIAHFHNVIIGGVVFGCFAGLTYWWPKSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYV 302

Query: 407 LGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDP 466
           LGFMG+TRR+S   +        +AA G  LIA GIL  +IQ+ VS R R    D+TGDP
Sbjct: 303 LGFMGMTRRLSQDINPEFHTMLMVAAGGAALIACGILCQVIQVFVSIRDREQNRDLTGDP 362

Query: 467 WNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGI 525
           W  RTLEWSTSSPPP YNFA +P +   D +W MK+    + +  K+++I MPKNT  G+
Sbjct: 363 WGARTLEWSTSSPPPFYNFAVVPNVVDRDEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGV 422

Query: 526 LISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           +I+ FSLI GFA+VW++W L II F+  ++  I  +F+   +YY+ + E+  IE 
Sbjct: 423 IIAGFSLIFGFAMVWYIWWLAIIGFVGMIVTWIVKSFDEDVDYYVPAAEVERIEN 477


>gi|417339743|ref|ZP_12121230.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Baildon str. R6-199]
 gi|357959992|gb|EHJ84008.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Baildon str. R6-199]
          Length = 529

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 303/432 (70%), Positives = 363/432 (84%), Gaps = 11/432 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARD-----------VAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPL 109
           PLQIGARD           VAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPL
Sbjct: 128 PLQIGARDSAADRRAGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPL 187

Query: 110 SGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTN 169
           SGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N
Sbjct: 188 SGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCAN 247

Query: 170 ILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFG 229
           +LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG
Sbjct: 248 VLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFG 307

Query: 230 IFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIIS 289
           +FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+
Sbjct: 308 VFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIA 367

Query: 290 IPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFL 349
           IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL
Sbjct: 368 IPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFL 427

Query: 350 VAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGF 409
           +AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGF
Sbjct: 428 IAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGF 487

Query: 410 MGVTRRMSHFED 421
           MG+TRR+S   D
Sbjct: 488 MGMTRRLSQQID 499


>gi|417451297|ref|ZP_12163038.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Montevideo str. S5-403]
 gi|353636591|gb|EHC82606.1| Cytochrome O ubiquinol oxidase subunit 1 [Salmonella enterica
           subsp. enterica serovar Montevideo str. S5-403]
          Length = 502

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 304/489 (62%), Positives = 389/489 (79%), Gaps = 1/489 (0%)

Query: 95  IGEFASTGWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMK 154
           +GEFA TGWL YPPLSGI  SP VGVDY+IW+LQ++GIGT L+GIN   TI+KMRAPGM 
Sbjct: 1   MGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMT 60

Query: 155 LMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWI 214
           +  MP+FTW +LC N+LI+A+FP+LT  + L TLDRY+GTHFFTND+GGN+MMY+NLIW 
Sbjct: 61  MFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWA 120

Query: 215 WGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSG 274
           WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+G
Sbjct: 121 WGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAG 180

Query: 275 ANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVIL 334
           ANVNAFFGITTMII+IPTG KIFNWLFTMY+GRI F   ++WTIGF++TF +GGM GV+L
Sbjct: 181 ANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLL 240

Query: 335 AVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWL 394
           AVP A+F+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PKAFG+KL   WGK +FWFW+
Sbjct: 241 AVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWI 300

Query: 395 IGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYR 454
           IGF+VAFMPLY+LGFMG+TRR+S   D        +AA G  LIA+GIL  + Q+ VS R
Sbjct: 301 IGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLTQIFVSIR 360

Query: 455 KRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQ 513
            R    D+TGDPW GRTLEWSTSSPPP YNFA +P +H+ D++W MK+    + +  +++
Sbjct: 361 DRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYE 420

Query: 514 DILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSE 573
           +I MPKN+  GI+I+ F+ + GFA++WH+W L I+ F   +I  I  +F+   +YY+   
Sbjct: 421 EIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVP 480

Query: 574 EITCIEKKR 582
           E+  +E + 
Sbjct: 481 EVEKLENQH 489


>gi|374605247|ref|ZP_09678184.1| quinol oxidase polypeptide I [Paenibacillus dendritiformis C454]
 gi|374389143|gb|EHQ60528.1| quinol oxidase polypeptide I [Paenibacillus dendritiformis C454]
          Length = 654

 Score =  633 bits (1632), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 319/584 (54%), Positives = 417/584 (71%), Gaps = 10/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q A+       +L P+HYNQIFT HGVIMI F+AMP + G+ N +V
Sbjct: 71  MLFRGGVDALLMRAQLAMP---ELSFLTPDHYNQIFTTHGVIMILFMAMPFMFGLFNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPP S    +PGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFWGAMLFNLSFVIGGSPDAGWLAYPPYSERMFNPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L++GIN I TI+KMRAPGMKLM MP+F W+ L + I I+ +FP+LT
Sbjct: 188 DFYIWGIQISGIGSLMTGINFIVTILKMRAPGMKLMKMPLFPWSVLSSCIAIIFSFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L L  LDRY+G HFFT D GGN MMY+NLIW+WGHPEVYI++LP FGIFSE+VSTF+ 
Sbjct: 248 ATLALLFLDRYLGAHFFTLDGGGNPMMYINLIWMWGHPEVYIIILPAFGIFSEIVSTFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMVYA ++I++LS++VW HHFFTMGSGA+VNAFF +TTM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVYAMMIISILSFLVWAHHFFTMGSGADVNAFFALTTMLIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RG+I FE P+LWTIGF++ F++GGM GV+L+V  A+F  HNS FL+AHFHN IIGG
Sbjct: 368 FTMFRGKITFETPMLWTIGFIVCFIVGGMTGVLLSVAPADFQFHNSYFLIAHFHNTIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+ L    GK +FWFW IGFYV FMP Y+LG MG+TRR+  + 
Sbjct: 428 VVFGYFAGLYYWWPKLFGFTLNERIGKWAFWFWNIGFYVCFMPQYVLGLMGMTRRLVTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D        ++  G +L+A+  L  + Q++  Y  +++  D TGDPWNGRTLEWS  SP
Sbjct: 488 WDKGWWEMNLVSTIGAVLMAIAFLLQVWQIV--YSVKYSPKDTTGDPWNGRTLEWSIPSP 545

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPK----DKFQDILMPKNTNIGILISIFSLIMG 535
            P YNFA +P +   D WW  K+   +  +     K + I MP+N+ I  ++S+F    G
Sbjct: 546 APHYNFATLPQVSSQDEWWEEKQRRARGEQPSIPPKLEPIHMPRNSGIPFVMSMFWFTAG 605

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           F  V+    +T+       + ++ ++FNY  +YYI  EEIT  E
Sbjct: 606 FGFVFDWVWMTVAGLAGVAVCMLVHSFNYNTDYYIPVEEITRTE 649


>gi|404253158|ref|ZP_10957126.1| cytochrome-c oxidase [Sphingomonas sp. PAMC 26621]
          Length = 695

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 287/588 (48%), Positives = 426/588 (72%), Gaps = 6/588 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML R   +AV+MR QQA++  +  G+L P+H+ ++F+ HG IMIFF+AMP +TG+INF++
Sbjct: 85  MLSRALVEAVLMRGQQAVAINNP-GFLTPDHFGELFSTHGSIMIFFMAMPFLTGLINFVM 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFP+ N+++ W+T GGA L+M SL +G+F++ GW GYPP +  A SP VG 
Sbjct: 144 PLQIGARDMAFPWANSVALWLTGGGAGLMMASLVVGQFSTGGWTGYPPYTETAFSPDVGP 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ +  IG+ ++GIN+  T+ K RAPGM+ M +P+F WT+LCT IL++ A P LT
Sbjct: 204 DYWIWAVSLGSIGSTMAGINIACTLYKKRAPGMEWMRLPLFCWTSLCTAILMIFAMPPLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDRY+G H FTNDLGGN+M Y NL W++GHPEVYIL+LP FG++SEVVSTFS+
Sbjct: 264 VATALLALDRYLGFHLFTNDLGGNMMNYANLFWLFGHPEVYILILPAFGVYSEVVSTFST 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K L+GY+S+V AT+ I +LS+ VW+HHFFTMG  AN+NA FGI TM I +PTG KI++W+
Sbjct: 324 KDLYGYTSLVLATMAIAVLSFTVWVHHFFTMGQSANLNAVFGIATMTIGVPTGVKIYDWI 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           +TM+RG +RF VP+L+ + FM+TFV+GG  G++LA+P  ++L+HN+LFLVAHFHN++I G
Sbjct: 384 WTMFRGEVRFTVPMLYALAFMMTFVLGGFTGILLAMPPLDYLVHNTLFLVAHFHNMLIPG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           +L+G+++G +YWFPKAFG++L+  WG+ +F  WL+GFY+AFMPLY+LG  G+ RR     
Sbjct: 444 LLYGMLAGYHYWFPKAFGFRLDERWGRIAFGCWLLGFYLAFMPLYVLGASGMARRTHEIF 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + + W  +A  G  ++   + S  +QL+VS R R       GDPW+GR+LEWS ++PP
Sbjct: 504 DPAFRPWLYVAMAGAGVLFCALGSLAVQLVVSIRDRELTRVYAGDPWDGRSLEWSIAAPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK----FQDILMPKNTNIGILISIFSLIMGF 536
           P YNFA +P + Q D ++  K +    P       ++DI++P+N+  G+ I +F+ +  F
Sbjct: 564 PEYNFARLPQVGQQDEFYNRKHDEGLDPPYAEPYGYEDIVIPRNSATGVAIGVFAAVSAF 623

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            L+WH+W L +++ ++T+  ++  +F   ++  + + E+   E +R R
Sbjct: 624 GLIWHIWWLAVLAAMVTVAALVVRSFGRNQHRVLHAVEV-AREDRRWR 670


>gi|334139567|ref|ZP_08512954.1| quinol oxidase, subunit 1 [Paenibacillus sp. HGF7]
 gi|333601642|gb|EGL13083.1| quinol oxidase, subunit 1 [Paenibacillus sp. HGF7]
          Length = 656

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 324/586 (55%), Positives = 412/586 (70%), Gaps = 14/586 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q A+       +L PEHYNQIFT HGVIMI F+AMPL+ G+ N  V
Sbjct: 71  MLFRGGVDALLMRTQLAMP---DMEFLQPEHYNQIFTTHGVIMILFMAMPLMFGLFNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPPLS ++ SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFFGAMLFNMSFVIGGSPDAGWLAYPPLSELSHSPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L++GIN I TI+KMRAPGMKLM MP+F+W+ L + I I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLMTGINFIVTILKMRAPGMKLMKMPMFSWSVLSSCIAIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR++G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGIFSEVV+TF+ 
Sbjct: 248 VTLALLFLDRFMGAHFFTLDGGGNPMMYINLIWMWGHPEVYIVVLPAFGIFSEVVATFAK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A ++I++LS+  W HHFFTMGSGANVNAFF ITTMII+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVFAMMIISVLSFFTWAHHFFTMGSGANVNAFFAITTMIIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+IRF+ P+LWTIGF+  F++GGM GV+L+V  A+F  HNS FL+AHFH V+IGG
Sbjct: 368 FTMYRGKIRFDTPMLWTIGFIPCFIVGGMTGVLLSVAPADFQFHNSYFLIAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG  +G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LG  G+TRR+S + 
Sbjct: 428 VAFGYFAGLYYWWPKIFGFKLNEKLGKWAFWLWNIGFYVCFMPQYFLGLDGMTRRLSTYG 487

Query: 421 DISLQIWFQI---AAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTS 477
             S   W+ +   +  G  L+ +G +  + Q  +++  +    D TGDPW+GRTLEWS  
Sbjct: 488 WDSG--WYGLNLTSTIGGFLMGIGFIFQVWQ--IAHSIKFMERDTTGDPWDGRTLEWSIP 543

Query: 478 SPPPVYNFAFIPLIHQSDSWWYMKKN----NFKFPKDKFQDILMPKNTNIGILISIFSLI 533
           SP P+YNFA IP     D +W  K+         PK K + I MPKN+ I  + S+   I
Sbjct: 544 SPAPLYNFATIPTASVQDPYWEEKQRLEQGGKPAPKAKLEPIHMPKNSAIPFIKSLCWFI 603

Query: 534 MGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
            GF  V+      I   I   + ++ ++FNY  +YYI  +EI   E
Sbjct: 604 AGFGFVFGWMFFAIPGMIGVAVCMLAHSFNYDTDYYIPVDEIERTE 649


>gi|395492768|ref|ZP_10424347.1| cytochrome-c oxidase [Sphingomonas sp. PAMC 26617]
          Length = 695

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 287/588 (48%), Positives = 426/588 (72%), Gaps = 6/588 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML R   +AV+MR QQA++  +  G+L P+H+ ++F+ HG IMIFF+AMP +TG+INF++
Sbjct: 85  MLSRALVEAVLMRGQQAVAINNP-GFLTPDHFGELFSTHGSIMIFFMAMPFLTGLINFVM 143

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFP+ N+++ W+T GGA L+M SL +G+F++ GW GYPP +  A SP VG 
Sbjct: 144 PLQIGARDMAFPWANSVALWLTGGGAGLMMASLVVGQFSTGGWTGYPPYTETAFSPDVGP 203

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ +  IG+ ++GIN+  T+ K RAPGMK M +P+F WT+LCT IL++ A P LT
Sbjct: 204 DYWIWAVSLGSIGSTMAGINIACTLYKKRAPGMKWMRLPLFCWTSLCTAILMIFAMPPLT 263

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDRY+G H FTNDLGGN+M Y NL W++GHPEVYIL+LP FG++SEVVSTFS+
Sbjct: 264 VATALLALDRYLGFHLFTNDLGGNMMNYANLFWLFGHPEVYILILPAFGVYSEVVSTFST 323

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K L+GY+S+V AT+ I +LS+ VW+HHFFTMG  AN+NA FGI TM I +PTG KI++W+
Sbjct: 324 KDLYGYTSLVLATMAIAVLSFTVWVHHFFTMGQSANLNAVFGIATMTIGVPTGVKIYDWI 383

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           +TM+RG +RF VP+L+ + FM+TFV+GG  G++LA+P  ++L+HN+LFLVAHFHN++I G
Sbjct: 384 WTMFRGEVRFTVPMLYALAFMMTFVLGGFTGILLAMPPLDYLVHNTLFLVAHFHNMLIPG 443

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           +L+G+++G +YWFPKAFG++L+  WG+ +F  W++GFY+AFMPLY+LG  G+ RR     
Sbjct: 444 LLYGMLAGYHYWFPKAFGFRLDERWGRIAFGCWVLGFYLAFMPLYVLGASGMARRTHEIF 503

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D + + W  +A  G  ++   + S  +QL+VS R R       GDPW+GR+LEWS ++PP
Sbjct: 504 DPAFRPWLYVAMAGAGVLFCALGSLAVQLVVSIRDREFTRVYAGDPWDGRSLEWSIAAPP 563

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK----FQDILMPKNTNIGILISIFSLIMGF 536
           P YNFA +P + Q D ++  K +    P       ++DI++P+N+  G+ I +F+ +  F
Sbjct: 564 PEYNFARLPQVGQQDEFYNRKHDEGLDPPYAEPYGYEDIVIPRNSATGVAIGVFAAVSAF 623

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            L+WH+W L +++ ++T+  ++  +F   ++  + + E+   E +R R
Sbjct: 624 GLIWHIWWLAVLAAMVTVAALVVRSFGRNQHRVLHAVEV-AREDRRWR 670


>gi|94495039|ref|ZP_01301620.1| ubiquinol oxidase polypeptide I [Sphingomonas sp. SKA58]
 gi|94425305|gb|EAT10325.1| ubiquinol oxidase polypeptide I [Sphingomonas sp. SKA58]
          Length = 687

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/583 (50%), Positives = 409/583 (70%), Gaps = 4/583 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML R   +A +MRLQQA++ G+  G++ PEH+ ++F+ HG IMIFF+AMP +TG+IN++V
Sbjct: 78  MLARALVEANLMRLQQAVAIGNP-GFVAPEHFAELFSTHGSIMIFFMAMPFLTGLINYLV 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN +S W+T+ GA L+M SL IG F++ GW GYPP + I  +PGVG 
Sbjct: 137 PLQIGARDVAFPVLNAISLWLTAAGAALMMASLVIGRFSTGGWSGYPPFTEIGFNPGVGP 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ +  + + ++GIN+  TI KMR PGMKLM MP+FTWT+LCT IL++ A P LT
Sbjct: 197 DYWIWAVTLGSLASTMTGINIAVTIYKMRCPGMKLMRMPLFTWTSLCTAILMIFAMPPLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDRY+  HFFTN LGGN+M Y NL W++GHPEVYI++LP FGI+SEVVSTFSS
Sbjct: 257 VATALLALDRYLDFHFFTNALGGNMMHYANLFWMFGHPEVYIVILPAFGIYSEVVSTFSS 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K L+GY S+V AT+ I +LS+ VWLHHFFTMG  A++NA FGI TM I +PTG KI+NW+
Sbjct: 317 KELYGYKSLVIATMAIAVLSFTVWLHHFFTMGQSASINAAFGIATMAIGVPTGVKIYNWI 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           +TM+RG +RF  P+++ + FM+TFV+GG+ G+ILA P  ++++HN+LFLVAHFHN++I G
Sbjct: 377 WTMFRGEVRFTTPMIYALAFMMTFVLGGLTGIILAFPPLDYIVHNTLFLVAHFHNMLIPG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            L+GL++   +WFPK FGY+L+  WG+ S   W++GFY+AFMPLY+LG  G+ RR     
Sbjct: 437 TLYGLLAAYTFWFPKVFGYRLDERWGRISCLCWIVGFYLAFMPLYVLGASGMARRTQAVM 496

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + + + W  +A  G L++     + I+QL VS R R       GDPW+GR LEWS S+PP
Sbjct: 497 ETAYRPWLFMAEAGALILLCAFAALIVQLWVSIRSRGANDVFVGDPWDGRALEWSVSAPP 556

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFK--FPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P +NFA +P + Q+  W+Y  K  +    P   + DI MP+N+ +  +I I S    F L
Sbjct: 557 PEFNFARLPHVDQAH-WFYDAKRKYAPYAPPIAYHDIWMPRNSAVAPVIGIASGAATFGL 615

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           VWHMW L I   I+    V+  +F    +  I + E+  I++ 
Sbjct: 616 VWHMWWLAIFGLIVIFAAVVARSFVRDTHRVIPASEVARIDES 658


>gi|357008605|ref|ZP_09073604.1| QoxB [Paenibacillus elgii B69]
          Length = 657

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 324/586 (55%), Positives = 417/586 (71%), Gaps = 12/586 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MRLQ A+       +L  +HYN IFT HGVIMI F+AMPL+ G+ N +V
Sbjct: 71  MLFRGGVDALLMRLQLAMP---GVEFLQADHYNAIFTTHGVIMILFMAMPLMFGLFNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFWM   GA+L  +S  IG     GWL YPPLS ++ SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNSLSFWMFFFGAMLFNVSFVIGGSPDAGWLAYPPLSELSHSPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TI+KMRAPGMKLM MP+F+W+ L + I+I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTILKMRAPGMKLMKMPMFSWSVLSSCIMIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             LFL  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+V+P FGIFSEVVSTFS 
Sbjct: 248 VTLFLLFLDRFTGAHFFTLDGGGNPMMYINLIWMWGHPEVYIVVVPAFGIFSEVVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGYSSMV+A + I++LS+  W+HHFFTMGSGA+VNAFF ITTM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYSSMVFAMIGISVLSFFTWVHHFFTMGSGADVNAFFAITTMLIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRIRF  P++W + F+  FVIGGM GV+L+V  A+F  HNS FL+AHFH V+IGG
Sbjct: 368 FTMFRGRIRFTTPMMWAVAFIPCFVIGGMTGVLLSVAPADFQFHNSYFLIAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    GK +FWFW IGFYV FMP Y LG  G+TRR   + 
Sbjct: 428 VVFGYFAGLYYWWPKMFGFKLNERLGKWAFWFWNIGFYVCFMPQYFLGLDGMTRRTYTYS 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQL-IVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
            D+       ++  G  L  MGI +FI Q+  ++Y  ++   D TGD W+GRTLEW+  S
Sbjct: 488 FDMGWGPLNFVSTIGGFL--MGI-AFIFQVWQIAYSIKNHEKDTTGDAWDGRTLEWTIPS 544

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFK----FPKDKFQDILMPKNTNIGILISIFSLIM 534
           P P+YNFA  P + ++D WW  K+   K     P  K + I MPKN+ I  + S    + 
Sbjct: 545 PAPMYNFAITPTVQETDDWWERKQKGEKPLAPIPDAKLEPIHMPKNSAIPFIKSSLWFLA 604

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           GF  VW+   LTI + +   I ++  +F+Y  +YYI  +E+   E+
Sbjct: 605 GFGFVWNWMWLTIPALVGIAICMLARSFSYDTDYYIPVDEVKRTEQ 650


>gi|226314761|ref|YP_002774657.1| quinol oxidase polypeptide I [Brevibacillus brevis NBRC 100599]
 gi|226097711|dbj|BAH46153.1| quinol oxidase polypeptide I [Brevibacillus brevis NBRC 100599]
          Length = 653

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 316/591 (53%), Positives = 420/591 (71%), Gaps = 12/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q A+       +L  +HYNQIFT HGVIMI F+AMPL+ G+ N IV
Sbjct: 67  MLFRGGVDALLMRAQLAMP---EMQFLSGDHYNQIFTTHGVIMILFMAMPLMFGLFNVIV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPP S +A +PG G 
Sbjct: 124 PLQLGARDVAFPFLNALSFWLFFSGAMLFNLSFVIGGSPDAGWLAYPPYSELAFNPGPGQ 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L++GIN I TI+K+RAPGM LM MP+F+W+ L + I IV AFP+LT
Sbjct: 184 DFYIWGIQISGIGSLMTGINFIVTILKVRAPGMTLMKMPMFSWSVLSSCIAIVFAFPILT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DRY+G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGIFSE+V+TFS 
Sbjct: 244 VTLALLFIDRYLGGHFFTLDGGGNPMMYINLIWMWGHPEVYIIVLPAFGIFSEIVATFSR 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A ++I++LS++VW HHFFTMGSGA+VNAFF +TTM+I+IPTG K+FNWL
Sbjct: 304 KKLFGYKSMVFAMIIISVLSFLVWAHHFFTMGSGADVNAFFAVTTMLIAIPTGVKVFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RG+I FE P+LW +G +  FVIGGM GV+L+V  A+F  HNS FLVAHFH VII G
Sbjct: 364 FTMFRGKITFETPMLWMVGIIPNFVIGGMTGVLLSVAPADFQYHNSYFLVAHFHQVIIAG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    G+ +FW W IGFY+ FMP Y LG MG+TRR+  + 
Sbjct: 424 VVFGFFAGLYYWWPKIFGFKLNERIGRWAFWLWNIGFYLCFMPQYALGLMGMTRRLYTYG 483

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQL-IVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
            D   + WF++    T+   +   +F++Q+  +++  +H   D TGDPWN RTLEWS  S
Sbjct: 484 WD---KGWFEMNLVSTIGAVIMGAAFLVQIWDIAHSIKHMKRDTTGDPWNARTLEWSIPS 540

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK---KNNFKFP-KDKFQDILMPKNTNIGILISIFSLIM 534
           P P YNFA +P +   D W   K   +   + P K + + I MPKN+ I I++S+F   +
Sbjct: 541 PAPFYNFAVMPQVTSQDDWHERKLRIEQGLEKPAKVELEPIHMPKNSGIPIVMSMFWFFV 600

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           GF L++    + +  FI  +  ++ ++FNY  +YY++ EEI   E +  R+
Sbjct: 601 GFGLIFDWLWMAVPGFIGVIACMVVHSFNYDTDYYVTVEEIKRTEAEAGRV 651


>gi|251794163|ref|YP_003008894.1| cytochrome-c oxidase [Paenibacillus sp. JDR-2]
 gi|247541789|gb|ACS98807.1| Cytochrome-c oxidase [Paenibacillus sp. JDR-2]
          Length = 658

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 317/593 (53%), Positives = 415/593 (69%), Gaps = 15/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA+++R Q A+       +L   HYN IFT HGVIMI F+AMPL+ G+ N +V
Sbjct: 72  MLFRGGVDALLIRTQLAVP---QLEFLHAGHYNAIFTTHGVIMILFMAMPLMFGLFNIVV 128

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN+LSFW+   GA+L  +S  IG     GWL YPPLS ++ SPG+G 
Sbjct: 129 PLQIGARDVAFPYLNSLSFWLFFFGAMLFNVSFVIGGSPDAGWLAYPPLSELSGSPGLGQ 188

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L SGIN + TI+KMRAPGMKLM MP+FTW+ L ++I I+ AFP+LT
Sbjct: 189 DFYIWGIQISGIGSLASGINFVVTILKMRAPGMKLMQMPMFTWSVLSSSITIMFAFPILT 248

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             LFL  +DRY+G HFFT D GGN MMYVNLIW+WGHPEVYI++LP FG+FS+VVSTFS 
Sbjct: 249 VTLFLLFIDRYLGAHFFTLDGGGNPMMYVNLIWMWGHPEVYIVILPAFGVFSDVVSTFSK 308

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A + I+  S+  WLHHFFTMGSGA+VNAFF +TTM+I+IPTG K+FNWL
Sbjct: 309 KKLFGYKSMVFALMSISFFSFFTWLHHFFTMGSGADVNAFFAVTTMLIAIPTGVKVFNWL 368

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI F  P+LWTI F+  FV+GGM GV+L+V  A+F  HNS FL+AHFH V+IGG
Sbjct: 369 FTMFRGRITFSQPMLWTIAFIPCFVVGGMTGVMLSVAPADFQFHNSYFLIAHFHQVLIGG 428

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LG MG+TRR + + 
Sbjct: 429 VVFGYFAGLYYWWPKMFGFKLHDGLGKWAFWLWNIGFYVCFMPQYALGLMGMTRRFNEYN 488

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWSTSS 478
            D+  Q    ++  G  ++ +G +  + Q  +++  +    + +GD W  GRTLEWS  S
Sbjct: 489 FDLGWQPLNIVSTVGAFIMGLGFIFQVWQ--IAHSIKFLKKEKSGDAWGEGRTLEWSIPS 546

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFK----FPKDKFQDILMPKNTNIGILISIFSLIM 534
           P P+YNFA +P +  SD WW  K+   K     P    + I MP+N+ I  ++S+F  I 
Sbjct: 547 PAPMYNFAHLPEVTSSDEWWEEKQRRAKGIQPKPPGPLEPIHMPRNSGIPFIMSVFFFIA 606

Query: 535 GFALVWHMWLLTIISFIITLIIVIY-NTFNYKRNYYISSEEITCIEK--KRIR 584
           GF  VWH W   I+  +I +   ++  +F+Y  +YYI  +EI   E   K +R
Sbjct: 607 GFGFVWH-WTWMIVPGLIGVACCMFARSFDYDPDYYIPVDEIERTEAALKGVR 658


>gi|398816367|ref|ZP_10575018.1| heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Brevibacillus sp. BC25]
 gi|398032758|gb|EJL26087.1| heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Brevibacillus sp. BC25]
          Length = 657

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 315/591 (53%), Positives = 419/591 (70%), Gaps = 12/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q  +       +L  +HYNQIFT HGVIMI F+AMPL+ G+ N IV
Sbjct: 71  MLFRGGVDALLMRAQLVMP---EMQFLSGDHYNQIFTTHGVIMILFMAMPLMFGLFNVIV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPP S +A +PG G 
Sbjct: 128 PLQLGARDVAFPFLNALSFWLFFSGAMLFNLSFVIGGSPDAGWLAYPPYSELAFNPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L++GIN I TI+K+RAPGM LM MP+F+W+ L + I IV AFP+LT
Sbjct: 188 DFYIWGIQISGIGSLMTGINFIVTILKVRAPGMTLMKMPMFSWSVLSSCIAIVFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DRY+G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLFIDRYLGGHFFTLDGGGNPMMYINLIWMWGHPEVYIIVLPAFGIFSEIVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A ++I++LS++VW HHFFTMGSGA+VNAFF +TTM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVFAMIIISVLSFLVWAHHFFTMGSGADVNAFFAVTTMLIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RG+I FE P+LW +G +  FVIGGM GV+L+V  A+F  HNS FLVAHFH VII G
Sbjct: 368 FTMFRGKITFETPMLWMVGIIPNFVIGGMTGVLLSVAPADFQYHNSYFLVAHFHQVIIAG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    G+ +FW W IGFY+ FMP Y LG MG+TRR+  + 
Sbjct: 428 VVFGFFAGLYYWWPKIFGFKLNERIGRWAFWLWNIGFYLCFMPQYALGLMGMTRRLYTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQL-IVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
            D   + WF++    T+   +   +F++Q+  +++  +H   D TGDPWN RTLEWS  S
Sbjct: 488 WD---KGWFEMNLVSTIGAVIMGAAFLVQIWDIAHSIKHMKRDTTGDPWNARTLEWSIPS 544

Query: 479 PPPVYNFAFIPLIHQSDSWWYMK---KNNFKFP-KDKFQDILMPKNTNIGILISIFSLIM 534
           P P YNFA +P +   D W   K   +   + P K + + I MPKN+ I I++S+F   +
Sbjct: 545 PAPFYNFAVMPQVTSQDDWHERKLRIEQGLEKPAKVELEPIHMPKNSGIPIVMSMFWFFV 604

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           GF L++    + +  FI  +  ++ ++FNY  +YY++ EEI   E +  R+
Sbjct: 605 GFGLIFDWLWMAVPGFIGVIGCMVVHSFNYDTDYYVTVEEIKRTEAEAGRV 655


>gi|260430581|ref|ZP_05784554.1| quinol oxidase subunit 1 [Citreicella sp. SE45]
 gi|260418610|gb|EEX11867.1| quinol oxidase subunit 1 [Citreicella sp. SE45]
          Length = 697

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 300/582 (51%), Positives = 404/582 (69%), Gaps = 3/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  + V+MR QQA  FG   G+L P+H++++F+ HG IMIFFVAMP + G+IN+++
Sbjct: 81  MLTRGVIEGVLMRTQQA--FGLHGGFLTPDHFSELFSTHGTIMIFFVAMPFIAGVINYVL 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARD+AFP +N +S  +T+ GA LVM+SL +GEF++ GW  YPP +G    PG G 
Sbjct: 139 PLQIGARDMAFPVMNQISLGLTATGAALVMLSLVVGEFSTGGWANYPPYTGADFQPGPGP 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWS+ IAGIGT LSGIN   TI K RAPGM  + MPIF WT +C +I+++ A P LT
Sbjct: 199 DYWIWSIVIAGIGTTLSGINFAVTIYKGRAPGMSFLRMPIFCWTVICASIIMIFALPPLT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               +   DRY+  HFFTNDLGGN+M YVNL W++GHPEVY+L++P +G+FSE+V TFS 
Sbjct: 259 VAALMLAADRYLDFHFFTNDLGGNMMNYVNLFWLFGHPEVYLLIIPCYGMFSEIVPTFSG 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR++GY SMVYAT+ I +LS+ VWLHHFFTMG  ANVNA FGI +M I+IPTG KI+NW+
Sbjct: 319 KRIYGYMSMVYATMAIAVLSFCVWLHHFFTMGQSANVNAAFGIASMAIAIPTGVKIYNWV 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T++RGRIR  VP+++ +GF   F +GG+ GV+LA P  ++ +HN+LFLVAHFHNVII G
Sbjct: 379 ATIFRGRIRMTVPMIYVVGFFYLFTVGGLTGVMLANPVISYQVHNTLFLVAHFHNVIIPG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL++  +YWFPKAFG++L   WG+ +   W+ GF   F+PLY LG  G+ RR   F 
Sbjct: 439 VLFGLLAAYHYWFPKAFGFRLHEGWGRRAALLWIAGFSFTFLPLYWLGLQGMPRRSVTFS 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S Q +  +A FG  LI   +    IQL VS R+R  L    GDPWNGR+LEWS  SPP
Sbjct: 499 DPSFQPFMWLAFFGAALILSALTCICIQLWVSIRQRDQLAAPLGDPWNGRSLEWSIPSPP 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP + Q D +   K     + + + ++DI MP NT IG+++ + +  +G ALV
Sbjct: 559 PAYNFAVIPQVTQRDEFTDAKATGRAYAEPEAYEDIEMPNNTAIGLIVCLCATALGLALV 618

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + +W L  +SF + + ++I  TF  +  + I + EI    + 
Sbjct: 619 FWIWWLAALSFCVMVAVLIGRTFLTETTHIIPAAEIAADHRA 660


>gi|310644021|ref|YP_003948779.1| transmembrane cytochrome o ubiquinol oxidase (subuniti
           oxidoreductase) [Paenibacillus polymyxa SC2]
 gi|309248971|gb|ADO58538.1| Probable transmembrane cytochrome o ubiquinol oxidase (SubunitI
           oxidoreductase protein) [Paenibacillus polymyxa SC2]
 gi|392304734|emb|CCI71097.1| cytochrome o ubiquinol oxidase subunit I [Paenibacillus polymyxa
           M1]
          Length = 658

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/584 (53%), Positives = 404/584 (69%), Gaps = 8/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A         L PEHYNQIFT HG IMI F+AMPL+ G+ N  V
Sbjct: 71  MLFRGGVDALLMRIQLATP---DVTLLHPEHYNQIFTTHGTIMILFMAMPLMFGLFNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPPLS +  SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFMGAMLFNLSFVIGGSPDAGWLSYPPLSELQFSPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TIIKMRAPGM  M MP+FTW+   + ++I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTIIKMRAPGMTWMKMPVFTWSVFSSCVIIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGI+SEV+S FS 
Sbjct: 248 VTLALLFLDRFGGGHFFTLDFGGNPMMYINLIWMWGHPEVYIVVLPAFGIYSEVISVFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMVYA  +I +LS+  W HHFFTMGSGA+VNAFF I+TM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVYAMFIIAILSFFTWAHHFFTMGSGADVNAFFAISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG++ F+ P++W+I F+  F+I G+ GV+L+V  A+F  HNS FL+AHFH+ +IGG
Sbjct: 368 FTMYRGKLEFKTPMMWSIAFIPNFLIAGLTGVMLSVAPADFQFHNSYFLIAHFHSALIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YW+PK FG+ L    GK +FWFW IGFYV F+P Y LG MG+TRR+S + 
Sbjct: 428 VVFGYLAGLYYWWPKMFGFTLPETPGKWAFWFWNIGFYVCFIPQYSLGLMGMTRRLSTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D   Q    ++  G  L+ +G L  ++Q+++  +    L D TGDPW G TLEWS  SP
Sbjct: 488 WDTGWQPLNMVSTVGAFLMGIGFLFQVLQILLGIKNYRKLKDTTGDPWGGHTLEWSIPSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFK--FPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
            P YNFA IP + + D WW  K    K  F K    + I MPKN+ I  ++S+F  I GF
Sbjct: 548 APEYNFATIPQVEERDDWWAEKDKRAKGIFRKQPPIEAIHMPKNSAIPFIMSVFFFIAGF 607

Query: 537 ALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIE 579
             V+      I   I + + ++  + F+Y  +YYI ++E+   E
Sbjct: 608 GFVFGWSFFYIPGLIGVAICMICRSFFSYDGDYYIPADEVKRTE 651


>gi|375310393|ref|ZP_09775664.1| transmembrane cytochrome o ubiquinol oxidase (subuniti
           oxidoreductase protein) [Paenibacillus sp. Aloe-11]
 gi|375077542|gb|EHS55779.1| transmembrane cytochrome o ubiquinol oxidase (subuniti
           oxidoreductase protein) [Paenibacillus sp. Aloe-11]
          Length = 658

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 313/584 (53%), Positives = 404/584 (69%), Gaps = 8/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A         L PEHYNQIFT HG IMI F+AMPL+ G+ N  V
Sbjct: 71  MLFRGGVDALLMRIQLA---SPDVTLLHPEHYNQIFTTHGTIMILFMAMPLMFGLFNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPPLS +  SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFMGAMLFNLSFVIGGSPDAGWLSYPPLSELQFSPGVGE 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TIIKMRAPGM  M MP+FTW+   + ++I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTIIKMRAPGMTWMKMPVFTWSVFSSCVIIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGI+SEV+S FS 
Sbjct: 248 ITLALLFLDRFGGGHFFTLDFGGNPMMYINLIWMWGHPEVYIVVLPAFGIYSEVISVFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMVYA  +I +LS+  W HHFFTMGSGA+VNAFF I+TM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVYAMFIIAILSFFTWAHHFFTMGSGADVNAFFAISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F+ P++W+I F+  F+I G+ GV+L+V  A+F  HNS FL+AHFH+ +IGG
Sbjct: 368 FTMYRGKIEFKTPMMWSIAFIPNFLIAGLTGVMLSVAPADFQFHNSYFLIAHFHSALIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YW+PK FG+ L    GK +FWFW IGFYV F+P Y LG MG+TRR+S + 
Sbjct: 428 VVFGYLAGLYYWWPKMFGFTLPETPGKWAFWFWNIGFYVCFIPQYSLGLMGMTRRLSTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D   Q    ++  G  L+ +G L  ++Q+++  +    L D TGDPW G TLEWS  SP
Sbjct: 488 WDTGWQPLNFVSTIGAFLMGIGFLFQVLQILLGIKNFRKLKDTTGDPWGGHTLEWSIPSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFK--FPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
            P YNFA IP + + D WW  K    K  F K    + I MPKN+ I  ++S+F  I GF
Sbjct: 548 APEYNFATIPQVEERDDWWAEKDKRAKGIFRKQPPIEAIHMPKNSAIPFIMSVFFFIAGF 607

Query: 537 ALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIE 579
             V+      I   I + + ++  + F+Y  +YYI ++E+   E
Sbjct: 608 GFVFGWSFFYIPGLIGVAICMICRSFFSYDADYYIPADEVKRTE 651


>gi|308070785|ref|YP_003872390.1| quinol oxidase aa3-600, subunit QoxB [Paenibacillus polymyxa E681]
 gi|305860064|gb|ADM71852.1| Quinol oxidase polypeptide I (Quinol oxidase aa3-600, subunit qoxB)
           [Paenibacillus polymyxa E681]
          Length = 658

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 313/584 (53%), Positives = 404/584 (69%), Gaps = 8/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A         L PEHYNQIFT HG IMI F+AMPL+ G+ N  V
Sbjct: 71  MLFRGGVDALLMRVQLATP---DVTLLHPEHYNQIFTTHGTIMILFMAMPLMFGLFNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPPLS +  SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFMGAMLFNLSFVIGGSPDAGWLSYPPLSELQFSPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TIIKMRAPGM  M MP+FTW+   + ++I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTIIKMRAPGMTWMKMPVFTWSVFSSCVIIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGI+SEV+S FS 
Sbjct: 248 VTLALLFLDRFGGGHFFTLDFGGNPMMYINLIWMWGHPEVYIVVLPAFGIYSEVISVFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMVYA  +I +LS+  W HHFFTMGSGA+VNAFF I+TM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVYAMFIIAILSFFTWAHHFFTMGSGADVNAFFAISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F+ P++W+I F+  F+I G+ GV+L+V  A+F  HNS FL+AHFH+ +IGG
Sbjct: 368 FTMYRGKITFKTPMMWSIAFIPNFLIAGLTGVMLSVAPADFQFHNSYFLIAHFHSALIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YW+PK FG+ L    GK +FWFW IGFYV F+P Y LG MG+TRR+S + 
Sbjct: 428 VVFGYLAGLYYWWPKMFGFTLPETPGKWAFWFWNIGFYVCFIPQYSLGLMGMTRRLSTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D   Q    ++  G  L+ +G L  ++Q+++  +    L D TGDPW G TLEWS  SP
Sbjct: 488 WDTGWQPLNLVSTVGAFLMGIGFLFQVLQILLGIKNYRKLKDTTGDPWGGHTLEWSIPSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFK--FPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
            P YNFA IP + + D WW  K    K  F K    + I MPKN+ I  ++S+F  I GF
Sbjct: 548 APEYNFATIPQVEERDDWWAEKDKRAKGIFRKQPPIEAIHMPKNSAIPFIMSVFFFIAGF 607

Query: 537 ALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIE 579
             V+      I   I + + ++  + F+Y  +YYI ++E+   E
Sbjct: 608 GFVFGWSFFYIPGLIGVAICMICRSFFSYDGDYYIPADEVKRTE 651


>gi|304407877|ref|ZP_07389528.1| cytochrome c oxidase subunit I [Paenibacillus curdlanolyticus YK9]
 gi|304343360|gb|EFM09203.1| cytochrome c oxidase subunit I [Paenibacillus curdlanolyticus YK9]
          Length = 657

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 310/589 (52%), Positives = 410/589 (69%), Gaps = 10/589 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MRLQ A+    +  +L  EHYN IFT HGVIMI F+AMP + G+ N +V
Sbjct: 70  MLFRGGVDALLMRLQLAMP---NTEFLHAEHYNAIFTTHGVIMILFMAMPFMFGLFNIVV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN+LSFW+   GA+L  +S  IG     GWL YPPLS ++ SPGVG 
Sbjct: 127 PLQIGARDVAYPFLNSLSFWLFFFGAMLFNVSFVIGGSPDAGWLAYPPLSELSHSPGVGQ 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN + TI+KMRAPGMKLM MP+FTW+ L + ++I+ AFP+LT
Sbjct: 187 NFYIWGIQISGIGSLATGINFVVTILKMRAPGMKLMKMPMFTWSVLSSCLMILFAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L  LDR++G HFFT D GGN MMY+N+IW+WGHPEVYI+V+P FGIFSEVV+TFS 
Sbjct: 247 VTMALLFLDRFLGAHFFTLDAGGNPMMYINMIWMWGHPEVYIVVVPAFGIFSEVVATFSR 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMV+A + I +LS+  W HHFFTMGSGA+VNAFF +TTMII+IPTG K+FNWL
Sbjct: 307 KKLFGYGSMVFAMIGIAVLSFFTWAHHFFTMGSGADVNAFFAVTTMIIAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRIRF  P+LWTI F+  F++GGM GV+L+V  A+F  HNS FL+AHFH V+IGG
Sbjct: 367 FTMFRGRIRFTTPMLWTIAFIPCFIVGGMTGVLLSVAPADFQFHNSYFLIAHFHQVLIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+ L+   GK +FW W IGFYV FMP Y LG  G+TRR+  ++
Sbjct: 427 VVFGYFAGLYYWWPKMFGFALDERLGKWAFWLWNIGFYVCFMPQYFLGLDGMTRRVYTYD 486

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+       ++  G  ++ +G +  + Q+  S +      D TGD W+ RTLEWS  SP
Sbjct: 487 FDMGWGPLNLVSTIGGFIMGIGFIFQVWQIAYSIKVHKR--DTTGDYWDARTLEWSIPSP 544

Query: 480 PPVYNFAFIPLIHQSDSWWYMKK---NNFKFP-KDKFQDILMPKNTNIGILISIFSLIMG 535
            P+YNFA  P +   D WW  K+      K P K   + I MPKN+ I  ++S+     G
Sbjct: 545 APLYNFATEPTVKDVDDWWETKQKLAKGEKLPAKPPLEPIHMPKNSAIPFIMSVCWFGAG 604

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           F  VW    + I S +   I ++  +F+Y  +YYI  +EI   E+  ++
Sbjct: 605 FGFVWDWLWMAIPSMVGVAICMLARSFSYDTDYYIPVDEIKRTEEAAMK 653


>gi|390452439|ref|ZP_10237967.1| transmembrane cytochrome o ubiquinol oxidase (subuniti
           oxidoreductase) [Paenibacillus peoriae KCTC 3763]
          Length = 658

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 312/584 (53%), Positives = 404/584 (69%), Gaps = 8/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A         L PEHYNQIFT HG IMI F+AMPL+ G+ N  V
Sbjct: 71  MLFRGGVDALLMRIQLA---SPDVTLLHPEHYNQIFTTHGTIMILFMAMPLMFGLFNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPPLS +  SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFMGAMLFNLSFVIGGSPDAGWLSYPPLSELQFSPGVGE 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TIIKMRAPGM  M MP+FTW+   + ++I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTIIKMRAPGMTWMKMPVFTWSVFSSCVIIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGI+SEV+S FS 
Sbjct: 248 ITLALLFLDRFGGGHFFTLDFGGNPMMYINLIWMWGHPEVYIVVLPAFGIYSEVISVFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMVYA  +I +LS+  W HHFFTMGSGA+VNAFF I+TM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVYAMFMIAILSFFTWAHHFFTMGSGADVNAFFAISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F+ P++W+I F+  F+I G+ GV+L+V  A+F  HNS FL+AHFH+ +IGG
Sbjct: 368 FTMYRGKIEFKTPMMWSIAFIPNFLIAGLTGVMLSVAPADFQFHNSYFLIAHFHSALIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YW+PK FG+ L    GK +FWFW IGFYV F+P Y LG MG+TRR+S + 
Sbjct: 428 VVFGYLAGLYYWWPKMFGFTLPETPGKWAFWFWNIGFYVCFIPQYSLGLMGMTRRLSTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D   Q    ++  G  L+ +G L  ++Q+++  +    L D TGDPW G TLEWS  SP
Sbjct: 488 WDTGWQPLNLVSTIGAFLMGIGFLFQVLQILLGIKNFRKLKDTTGDPWGGHTLEWSIPSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFK--FPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
            P YNFA IP + + D WW  K    K  F K    + I MPKN+ I  ++S+F  I GF
Sbjct: 548 APEYNFATIPQVEERDDWWAEKDKRAKGIFRKQPPIEAIHMPKNSAIPFIMSVFFFIAGF 607

Query: 537 ALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIE 579
             V+      I   + + + ++  + F+Y  +YYI ++E+   E
Sbjct: 608 GFVFGWSFFYIPGLLGVAICMICRSFFSYDADYYIPADEVKRTE 651


>gi|357031980|ref|ZP_09093920.1| cytochrome-c oxidase subunit 1 [Gluconobacter morbifer G707]
 gi|356414207|gb|EHH67854.1| cytochrome-c oxidase subunit 1 [Gluconobacter morbifer G707]
          Length = 682

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 286/582 (49%), Positives = 412/582 (70%), Gaps = 2/582 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  +A++MR QQA+++ S+ G+LPPEH+ Q+FT HG IMIFF+ MP + G+ NF++
Sbjct: 72  MLLRGAIEAILMRAQQAVAYQSA-GFLPPEHFAQLFTTHGTIMIFFMGMPFLIGLYNFVL 130

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDV++P +N +S   T+ GA+L+M+SL IG+F++ GW GYPP + +  SP VGV
Sbjct: 131 PLQLGARDVSYPVMNAVSLAFTAAGAVLLMVSLCIGKFSTGGWSGYPPYTELTYSPDVGV 190

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++ IG  ++GIN   TI K RAPGM L  MP+F WT LC +IL++ A P LT
Sbjct: 191 DYWIWAVTLSSIGNTMTGINFAVTIYKKRAPGMLLFRMPLFCWTGLCISILMIFAMPPLT 250

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               +  LDRY+  HFFTN  GGN+M YVN+ W++GHPEVYIL+LP FG++SE ++TFSS
Sbjct: 251 VATLMLALDRYMDMHFFTNTGGGNMMNYVNMFWLFGHPEVYILILPAFGVYSETIATFSS 310

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K L+GY+S+V+A++ I +LS+ VWLHHFFTMG   NVNA FGI T++I+IPTG K+++W+
Sbjct: 311 KTLYGYTSLVWASMCIAVLSFTVWLHHFFTMGQSGNVNAVFGIATLLIAIPTGVKVYDWI 370

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TM+RG++R  VP+L+   FMI F IGG  GV+LA P  ++  HN+LFLVAHFHN++I G
Sbjct: 371 LTMFRGQVRLTVPMLYACAFMILFTIGGSTGVMLANPGFDYQAHNTLFLVAHFHNMLIPG 430

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           +LFG++ G +YWFPKAFG++L   WG+ +F FW+ GF  AFMPLY LG +G+ RR   + 
Sbjct: 431 LLFGMLGGYHYWFPKAFGFRLHEGWGRAAFGFWVSGFVFAFMPLYALGVLGMPRRSQEYF 490

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           + +   +  +A FG LLI   +LS ++QL +S R R  L    GDPW+GRTLEWS S+PP
Sbjct: 491 EGAYLPYTIVALFGGLLIGAALLSMMVQLWISIRHRDELNVYAGDPWDGRTLEWSISAPP 550

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA +P +H  D+++  K +   +   + +  I +P NT +G +  +     GFAL 
Sbjct: 551 PEYNFAILPQVHSRDAFFAAKMDGTAWQAPETYHPIEIPTNTPLGPICCMSMAATGFALT 610

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           WH+W L ++  ++ +  +I  +FN      +++EE++ IE +
Sbjct: 611 WHIWWLALLGLMVFVAAIIIRSFNKHTTRILNAEEVSRIETR 652


>gi|374320461|ref|YP_005073590.1| quinol oxidase aa3-600, subunit QoxB [Paenibacillus terrae HPL-003]
 gi|357199470|gb|AET57367.1| quinol oxidase polypeptide I (quinol oxidase aa3-600, subunit qoxB)
           [Paenibacillus terrae HPL-003]
          Length = 658

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 313/584 (53%), Positives = 403/584 (69%), Gaps = 8/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A         L PEHYNQIFT HG IMI F+AMPL+ G+ N  V
Sbjct: 71  MLFRGGVDALLMRIQLATP---DVTLLHPEHYNQIFTTHGTIMILFMAMPLMFGLFNIAV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  +S  IG     GWL YPPLS +  SPGVG 
Sbjct: 128 PLQIGARDVAFPFLNALSFWLFFMGAMLFNLSFVIGGSPDAGWLSYPPLSELQFSPGVGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TIIKMRAPGM  M MP+FTW+   + ++I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTIIKMRAPGMTWMKMPVFTWSVFSSCVIIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+VLP FGI+SEV+S FS 
Sbjct: 248 VTLALLFLDRFGGGHFFTLDFGGNPMMYINLIWMWGHPEVYIVVLPAFGIYSEVISVFSK 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY SMVYA  +I +LS+  W HHFFTMGSGA+VNAFF I+TM+I+IPTG K+FNWL
Sbjct: 308 KKLFGYKSMVYAMFMIAILSFFTWAHHFFTMGSGADVNAFFAISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRG+I F+ P++W I F+  F+I G+ GV+L+V  A+F  HNS FL+AHFH+ +IGG
Sbjct: 368 FTMYRGKITFKTPMMWAIAFIPNFLIAGLTGVMLSVAPADFQFHNSYFLIAHFHSALIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YW+PK FG+ L    GK +FWFW IGFYV F+P Y LG MG+TRR+S + 
Sbjct: 428 VVFGYLAGLYYWWPKMFGFTLPETPGKWAFWFWNIGFYVCFIPQYSLGLMGMTRRLSTYG 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D   Q    ++  G  L+ +G L  ++Q+++  +    L D TGDPW G TLEWS  SP
Sbjct: 488 WDTGWQPLNLVSTVGAFLMGIGFLFQVLQILLGIKNFRKLKDTTGDPWGGHTLEWSIPSP 547

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFK--FPKDK-FQDILMPKNTNIGILISIFSLIMGF 536
            P YNFA IP + + D WW  K    K  F K    + I MPKN+ I  ++S+F  I GF
Sbjct: 548 APEYNFATIPQVEERDDWWAEKDKRAKGIFRKQSPIEAIHMPKNSAIPFIMSVFFFIAGF 607

Query: 537 ALVWHMWLLTIISFI-ITLIIVIYNTFNYKRNYYISSEEITCIE 579
             V+      I   I + + ++  + F+Y  +YYI ++E+   E
Sbjct: 608 GFVFGWSFFYIPGLIGVAICMICRSFFSYDGDYYIPADEVKRTE 651


>gi|346993422|ref|ZP_08861494.1| cytochrome-c oxidase [Ruegeria sp. TW15]
          Length = 696

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 301/586 (51%), Positives = 414/586 (70%), Gaps = 3/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  + V+MR QQA   G   G+L PEH+ ++F+ HG IMIFFVA+P V G+ N++V
Sbjct: 84  MLARGVLEGVVMRAQQAAGPGD--GFLKPEHFAELFSTHGTIMIFFVAVPFVFGVANYLV 141

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PL IGARDVAFP +N +S  +T    +++M+SL +GEF++ GW  YPP +G A +PGVG 
Sbjct: 142 PLMIGARDVAFPVINQISLGLTVSSGMMLMVSLVVGEFSTGGWTAYPPYTGAAFNPGVGP 201

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++G+GT L+GIN   TI K+RAPGMK M +P++ WT +C++ILIV A P L 
Sbjct: 202 DYWIWAIVVSGVGTTLTGINFAVTIYKLRAPGMKFMRLPMYCWTIICSSILIVFAMPPLG 261

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L   DRY+  HFFTNDLGGN+M Y NL W++GHPEVY+LVLP +GI+SEV +TFS+
Sbjct: 262 VAALLLAADRYLDFHFFTNDLGGNMMNYANLFWLFGHPEVYLLVLPAYGIYSEVFATFSA 321

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRL+GY+S+V AT+ I +LS+ VWLHHFFTMG  A +NA FGI TM+I+IPTG K+++W+
Sbjct: 322 KRLYGYNSLVIATMSIAVLSFTVWLHHFFTMGQSALINAVFGIATMLIAIPTGVKVYDWM 381

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T+YRGRIRF VP+L+ + F++ FVIGG++GVILA P  ++ +HN+LFLVAHFHNV++ G
Sbjct: 382 ATLYRGRIRFSVPMLYGLAFLMLFVIGGLSGVILANPTIDYQVHNTLFLVAHFHNVLLPG 441

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLF L++G NYWFPKAFG++L  FWG+ S   W +GF + FMPLY +G MG+ RR   +E
Sbjct: 442 VLFALLAGYNYWFPKAFGFRLNEFWGRVSVVCWTVGFLLTFMPLYFVGLMGMPRRSYSWE 501

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S   +  IA  G L+I  G+ S +IQL VS R R       GDPW+GRTLEWS  SPP
Sbjct: 502 DPSFHPYMIIAVIGALVITCGLFSILIQLWVSIRNREKTRAPIGDPWDGRTLEWSIPSPP 561

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +   D++   K+    +PK + ++DI MP+NT IG ++ + S +  FALV
Sbjct: 562 PPYNFAIIPEVTDRDNFAAAKERAAAYPKPEAYEDIEMPRNTGIGFILCVLSGVWMFALV 621

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           W +W L ++  I  ++ +I  +F+      I +EE+    +  + L
Sbjct: 622 WWIWWLALLMTITIILAIIIWSFDTSTEIIIPAEEVRKDHEAWLDL 667


>gi|254513062|ref|ZP_05125128.1| cytOchrome o ubiquinol oxidase, subunit I [Rhodobacteraceae
           bacterium KLH11]
 gi|221533061|gb|EEE36056.1| cytOchrome o ubiquinol oxidase, subunit I [Rhodobacteraceae
           bacterium KLH11]
          Length = 696

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 294/576 (51%), Positives = 406/576 (70%), Gaps = 3/576 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  + V+MR QQA   G   G+L P+H+ ++F+ HG IMIFFVA+P V G+ N++V
Sbjct: 84  MLARGVLEGVVMRAQQAAGPGD--GFLEPDHFAELFSTHGTIMIFFVAVPFVFGVANYLV 141

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PL IGARDVAFP +N +   +T    +++M+SL +GEF++ GW  YPP +G A +PGVG 
Sbjct: 142 PLMIGARDVAFPVMNQIGLGLTVSSGMMLMVSLVVGEFSTGGWTAYPPYTGAAFNPGVGP 201

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++GIGT L+GIN   TI K+RAPGMK M +P++ WT +C++ILIV A P L 
Sbjct: 202 DYWIWAIVVSGIGTTLTGINFAVTIYKLRAPGMKFMRLPMYCWTIICSSILIVFAMPPLG 261

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L   DRY+  HFFTNDLGGN+M Y NL W++GHPEVY+LVLP +GI+SEV +TFS+
Sbjct: 262 VAALLLAADRYLDFHFFTNDLGGNMMNYANLFWLFGHPEVYLLVLPAYGIYSEVFATFSA 321

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRL+GY+S+V AT+ I ++S+ VWLHHFFTMG  A +NA FGI TM+I+IPTG K+++W+
Sbjct: 322 KRLYGYNSLVIATMSIAIMSFTVWLHHFFTMGQSALINAVFGIATMLIAIPTGVKVYDWM 381

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T++RGRIRF VP+L+ + F++ FV+GG++GVILA P  ++ +HN+LFLVAHFHNV++ G
Sbjct: 382 ATLWRGRIRFTVPMLYGLAFLMLFVVGGLSGVILANPTVDYQVHNTLFLVAHFHNVLLPG 441

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL++  NYWFPKAFG++L  FWG+ S + W +GF + FMPLY +G MG+ RR   +E
Sbjct: 442 VLFGLLAAYNYWFPKAFGFRLNEFWGRVSVFCWTVGFLLTFMPLYFVGLMGMPRRSFSWE 501

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S   +   A  G L+I  G+ S +IQL VS R R       GDPW+ RTLEWS  SPP
Sbjct: 502 DPSFHPYMITAVIGALVITCGLFSILIQLWVSIRDRDQTRSPVGDPWDARTLEWSIPSPP 561

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFP-KDKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +   D +   K+    +P  D ++DI MP+NT IG ++ + S I  FALV
Sbjct: 562 PPYNFAIIPKVTDRDDFAAAKERGAAYPTPDAYEDIEMPRNTGIGFVLCVSSGIWMFALV 621

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEI 575
           W +W L  +  ++ ++  I  +F+      I +EE+
Sbjct: 622 WWIWWLAALMTVLMILAFIIWSFDTSTEVIIPAEEV 657


>gi|418536938|ref|ZP_13102604.1| ubiquinol oxidase, subunit I, partial [Burkholderia pseudomallei
           1026a]
 gi|385351310|gb|EIF57789.1| ubiquinol oxidase, subunit I, partial [Burkholderia pseudomallei
           1026a]
          Length = 486

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 285/469 (60%), Positives = 363/469 (77%), Gaps = 5/469 (1%)

Query: 119 GVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPV 178
           GVDYY+W+LQI+G+GTLL+G+N    I++MRAPGM LM MP+FTWTALCTN+LI+A+FP+
Sbjct: 1   GVDYYLWALQISGVGTLLTGVNFFVMILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPI 60

Query: 179 LTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTF 238
           LT  L L  LDRY+G HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T+
Sbjct: 61  LTVTLALLGLDRYLGMHFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATY 120

Query: 239 SSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFN 298
           + K LFGY +MVYA+  I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FN
Sbjct: 121 AKKPLFGYKTMVYASCAIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFN 180

Query: 299 WLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVII 358
           WLFT+YRGR+ F  PILWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVII
Sbjct: 181 WLFTIYRGRLEFSTPILWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVII 240

Query: 359 GGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSH 418
           GGVLFG ++G NYWFPK FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H
Sbjct: 241 GGVLFGYLAGFNYWFPKVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNH 300

Query: 419 FEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWST 476
           +++ +   W  +AA G  LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T
Sbjct: 301 YDNPAWHPWLIVAACGAALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWAT 360

Query: 477 SSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLI 533
           +SPPP YNFA IP +H  D + Y K+        K   ++DI MP NT+ G+ + +FSL+
Sbjct: 361 ASPPPAYNFATIPTVHALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLV 420

Query: 534 MGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           +GFA VWH+W L I +    L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 LGFAAVWHIWWLAIAALAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 469


>gi|422616270|ref|ZP_16684976.1| cytochrome o ubiquinol oxidase, subunit I, partial [Pseudomonas
           syringae pv. japonica str. M301072]
 gi|330895786|gb|EGH28075.1| cytochrome o ubiquinol oxidase, subunit I, partial [Pseudomonas
           syringae pv. japonica str. M301072]
          Length = 497

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 280/430 (65%), Positives = 357/430 (83%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR Q A++   + G+LPPEHY+QIFTAHGVIMI F+AMP  TG++N ++
Sbjct: 68  MLLRGFADAIMMRTQLAMAQNGAEGFLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNIVL 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN+LSFW+   G +L+ +SL +GEFA TGW+ YPPLSG+  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNSLSFWLLVAGMLLINLSLGVGEFAKTGWVAYPPLSGLQYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW+LQ++G+GT L+G+N + T++KMR PGMKLM+MPIFTWT    NILIVA+FP+LT
Sbjct: 188 DYYIWALQLSGLGTTLTGVNFLVTVLKMRTPGMKLMDMPIFTWTCTWANILIVASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L   TLDRY+  H FTN++GGN MMYVNL W WGHPEVYIL+LP FG+FSEV+STFS 
Sbjct: 248 ATLAFLTLDRYLDFHIFTNEMGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVISTFSG 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFG+ SM++A+  I +L ++VWLHHFFTMG+GANVNAFFG+ TM+I+IPTG K+FNWL
Sbjct: 308 KRLFGHKSMIFASGAICILGFMVWLHHFFTMGAGANVNAFFGLATMLIAIPTGVKLFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GR+RF  P+LWT+GFM+TF IGGM GV+LA+P A+F+LHNSLF++AHFHNVIIGG
Sbjct: 368 FTMYQGRLRFTAPVLWTLGFMVTFSIGGMTGVLLAIPGADFVLHNSLFVIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +FG ++G  +WFPKAFG+ L   WGK +FWFW++GF+VAFMPLY LGF+G+TRR++  +
Sbjct: 428 AVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWFWIVGFFVAFMPLYALGFLGMTRRLNATD 487

Query: 421 DISLQIWFQI 430
                I+  +
Sbjct: 488 MPEWNIYLDV 497


>gi|260430764|ref|ZP_05784736.1| quinol oxidase subunit 1 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260418205|gb|EEX11463.1| quinol oxidase subunit 1 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 696

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/576 (50%), Positives = 408/576 (70%), Gaps = 3/576 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  + V+MR QQA   G   G+L  +H+ ++F+ HG IMIFFVA+P V G+ NF+V
Sbjct: 84  MLARGVLEGVVMRAQQAAGPGE--GFLEAKHFAELFSTHGTIMIFFVAVPFVFGLANFLV 141

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PL IGARDVAFP +N +S  +T    +++M+SL +GEF++ GW  YPP +G A +PGVG 
Sbjct: 142 PLMIGARDVAFPVMNQISLGLTVSAGMMLMVSLVVGEFSTGGWTAYPPYTGAAFNPGVGP 201

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++GIGT L+GIN   TI K+RAPGMK M +P++ WT +C++ILIV A P L 
Sbjct: 202 DYWIWAIVVSGIGTTLTGINFAVTIYKLRAPGMKFMRLPMYCWTIICSSILIVFAMPPLG 261

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L   DRY+  HFFTNDLGGN+M Y NL W++GHPEVY+LVLP +GI+SEV +TFS+
Sbjct: 262 VAALLLAADRYLDFHFFTNDLGGNMMNYANLFWLFGHPEVYLLVLPAYGIYSEVFATFSA 321

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRL+GY+S+V AT+ I +LS+ VWLHHFFTMG  A +NA FGI TM+I+IPTG K+++W+
Sbjct: 322 KRLYGYNSLVIATMSIAVLSFTVWLHHFFTMGQSALINAVFGIATMLIAIPTGVKVYDWM 381

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T+YRGRIRF VP+L+ + F++ FVIGG++GVILA P  ++ +HN+LFLVAHFHNV++ G
Sbjct: 382 ATLYRGRIRFSVPMLYGLAFLMLFVIGGLSGVILANPTVDYQVHNTLFLVAHFHNVLLPG 441

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFGL++G NYWFPKAFG++L+  WG+ S   W +GF + F+PLY +G MG+ RR   +E
Sbjct: 442 VLFGLLAGYNYWFPKAFGFRLDEAWGRISVVLWTVGFMLTFLPLYFVGLMGMPRRSYSWE 501

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S   +   A  G L+I   +LS ++QL VS R R       GDPW+ RTLEWS  +PP
Sbjct: 502 DPSFHPYMITAVIGALVILAALLSVVVQLWVSIRNREQTRVPVGDPWDARTLEWSIPAPP 561

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALV 539
           P YNFA IP +   D +   K+    +P  D+++DI +P+NT+IG ++ + S +  FALV
Sbjct: 562 PPYNFAIIPRVTDRDDFAAAKERGAAYPHPDRYEDITIPRNTSIGFVLCVLSGVWMFALV 621

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEI 575
           W +W L  +  ++ ++  I  TF       +S+E++
Sbjct: 622 WWIWWLAALVTVMMILSFILWTFQTDTEEVVSAEDV 657


>gi|421599872|ref|ZP_16042991.1| cytochrome o ubiquinol oxidase subunit I, partial [Bradyrhizobium
           sp. CCGE-LA001]
 gi|404268015|gb|EJZ32576.1| cytochrome o ubiquinol oxidase subunit I, partial [Bradyrhizobium
           sp. CCGE-LA001]
          Length = 525

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 297/459 (64%), Positives = 377/459 (82%), Gaps = 1/459 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG +DA+MMR+QQA+++ S  GYLPPEHYNQIF+AHG IMIFFVAMP V G++N IV
Sbjct: 68  MLLRGGSDAIMMRIQQAVAYQSQ-GYLPPEHYNQIFSAHGTIMIFFVAMPFVIGLMNLIV 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+G RDVAFP LN++ FW+T+ GA+LV ISL +GEFA TGWL +PPLS ++ SPGVGV
Sbjct: 127 PLQLGVRDVAFPTLNSVGFWLTATGALLVNISLVVGEFARTGWLAFPPLSELSYSPGVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYY WSLQI+G+GTL++GIN++ T++K+R  GM  + MP+F WT L +N+LIVAAFP+LT
Sbjct: 187 DYYAWSLQISGVGTLVAGINLVTTVLKLRTKGMNYLRMPMFCWTTLASNLLIVAAFPILT 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           + L +  LDRY+G HFFTN+ GGN+MM++NLIW WGHPEVYILVLP FGIFSEVVSTFS 
Sbjct: 247 ATLAMLLLDRYLGFHFFTNEAGGNVMMFMNLIWAWGHPEVYILVLPAFGIFSEVVSTFSG 306

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMV AT+ I ++S++VWLHHFFTMG+G NVNA FGI +MII++PTG KI+NWL
Sbjct: 307 KALFGYRSMVLATMAICVISFMVWLHHFFTMGAGPNVNAIFGIASMIIAVPTGVKIYNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY GRIRF  P+LW IGFM+TF+IGG+ GV+LAVP A+F+LHNS+FLVAHFHNVIIGG
Sbjct: 367 FTMYGGRIRFATPMLWAIGFMVTFIIGGLTGVLLAVPPADFILHNSMFLVAHFHNVIIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG  +G  YWFPKAFG++L+  WGK +FWF   GF+V FMPLYI+G +G+TRRM H++
Sbjct: 427 VLFGAFAGFEYWFPKAFGFRLDERWGKAAFWFTFTGFFVTFMPLYIVGLLGMTRRMQHYD 486

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTL 459
             + + W  +AA G  ++ +G++  I+Q++VS R R  L
Sbjct: 487 VAAWRPWMIVAAIGMAVLTIGVICQIVQIVVSVRNREAL 525


>gi|85717117|ref|ZP_01048077.1| cytochrome c oxidase, subunit I [Nitrobacter sp. Nb-311A]
 gi|85696077|gb|EAQ33975.1| cytochrome c oxidase, subunit I [Nitrobacter sp. Nb-311A]
          Length = 657

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/584 (49%), Positives = 400/584 (68%), Gaps = 6/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  DA+M+R QQA +F    GYLPP+H++QIFT+H  IM+FFVAMP V G+ + ++
Sbjct: 68  MLVRGVVDALMIRTQQAFAF-EPHGYLPPDHFDQIFTSHATIMMFFVAMPFVLGLFSMVI 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGAR VAFPF+N+   W+T  GA LVMISL +G F++  W  YPP SG+  SP VGV
Sbjct: 127 PQQIGARQVAFPFMNSAGLWLTVSGAALVMISLVVGRFSAAYWTAYPPQSGMQFSPDVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++ +G++L+GI+   TI+K RAPGM+LM MP+FTWTALC +ILI+ A+P L 
Sbjct: 187 DYWIWAVLLSSVGSILAGISCFVTIVKRRAPGMRLMMMPLFTWTALCASILIIFAYPSLI 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDR++GT FF    G  +M Y++L WIWGHP VYIL+LP  GI+SEVV+TFS 
Sbjct: 247 VAAALLGLDRHLGTQFFAGSDG--VMNYISLFWIWGHPHVYILILPACGIYSEVVATFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           +RLFGY+S+VY+ + IT LS +VWLHHF+T+GSGA+VNAFFG    +I++PT   I  W 
Sbjct: 305 RRLFGYASLVYSMIAITALSLVVWLHHFYTIGSGADVNAFFGRAAPLIAVPTMVTIVCWS 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T+YRG+++F VP+L+T+GF++TF++GG+ G + AV   +  +H++ F  AHFHN++I G
Sbjct: 365 LTIYRGQVQFSVPMLFTLGFIVTFLVGGITGFLFAVIPPS--IHDTTFRAAHFHNLLIPG 422

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKAFG++LE  WG+ +FW W++GF +AFMPLYILGFMG+ +R++   
Sbjct: 423 ALFGYFAGYQYWFPKAFGFRLEEKWGRRAFWCWIVGFCLAFMPLYILGFMGMPQRLNRSN 482

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q +  IA  G L I  G+    +Q+ VS R R  L   + DPWNGRTLEW+T+SPP
Sbjct: 483 VADWQPYLIIAQAGVLFIVCGVAFLAVQIAVSIRDRKALAASSNDPWNGRTLEWATASPP 542

Query: 481 PVYNFAFIPLIHQSDSWWYMKK-NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            VYNFA +P +   D WW +K+         +F DILMP  +   I++   S +  FA++
Sbjct: 543 AVYNFAAVPRVQSVDPWWALKQAGTADHRPTRFHDILMPGKSGAAIMLGAMSFVFAFAMI 602

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           W +W L     +     V+  TF+    + I + E+  IE +R+
Sbjct: 603 WQIWWLAAAGGLGMFAAVVSQTFHDHAGHRIPASEVEAIESRRV 646


>gi|398815723|ref|ZP_10574387.1| heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Brevibacillus sp. BC25]
 gi|398034013|gb|EJL27292.1| heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Brevibacillus sp. BC25]
          Length = 656

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 310/595 (52%), Positives = 406/595 (68%), Gaps = 20/595 (3%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MRLQ A     +  +L  +HYN IFT HG IMI F+AMP++  + N +V
Sbjct: 71  MLFRGGVDALLMRLQLAFP---NVEFLNSDHYNAIFTTHGTIMILFMAMPMMFALFNMVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVA+PFLN LSFW+   GA+L  IS  IG     GWL YPPLS    SPG G 
Sbjct: 128 PLQLGARDVAYPFLNALSFWLFMLGAMLFNISFVIGGSPDAGWLSYPPLSQNEFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TI+KMRAPGMKL  MP+F+W+ L + I+I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTILKMRAPGMKLSKMPLFSWSVLSSCIMIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+V+P FGIFSE+V+TFS 
Sbjct: 248 VTLALLFLDRFAGAHFFTMDGGGNPMMYLNLIWMWGHPEVYIVVVPAFGIFSEIVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV+A ++I ++S+  W HHFFTMG+ A+V AFF I+TMI+ IPTG K+FNWL
Sbjct: 308 KKIFGYKSMVWAMMIIAVVSFFTWAHHFFTMGTSASVIAFFAISTMIVGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F+ P+LWTI F+  FVIGG  GV+LAV  A++  HNS FLVAHFH V+IGG
Sbjct: 368 FTMYRGRISFKQPMLWTIAFIPCFVIGGATGVMLAVAPADYQYHNSYFLVAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF- 419
           V+FG ++GI YW+PK FG+KL+   GK  FWFW IGFYV FMP Y LGFMG+TRR   + 
Sbjct: 428 VVFGYLAGIYYWWPKLFGFKLDEKLGKWGFWFWNIGFYVCFMPQYALGFMGMTRRYYTYG 487

Query: 420 -----EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEW 474
                 D++L     ++  G  ++ +G +  + Q  ++Y  +H   D TGDPWNGRTLEW
Sbjct: 488 WDRGWADMNL-----VSTVGAFMMGIGFIFQVWQ--IAYSIKHGERDTTGDPWNGRTLEW 540

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKK----NNFKFPKDKFQDILMPKNTNIGILISIF 530
           S  SP P YNFA +P + + D WW  K+      +K    K + I MPKN+ I  +++ F
Sbjct: 541 SIPSPAPFYNFAVVPQVKEMDDWWATKEAKANGTYKEQPAKLEPIHMPKNSGIPFIMANF 600

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
             ++GF   +    + +I FI     +   +F Y  +YY+  EE+   E    R+
Sbjct: 601 WFLVGFGFTFGWVWMAVIGFIGVFACMWARSFQYDTDYYVPVEEVRRTEASLGRV 655


>gi|399067403|ref|ZP_10748906.1| heme/copper-type cytochrome/quinol oxidase, subunit 1, partial
           [Novosphingobium sp. AP12]
 gi|398026825|gb|EJL20398.1| heme/copper-type cytochrome/quinol oxidase, subunit 1, partial
           [Novosphingobium sp. AP12]
          Length = 501

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 281/479 (58%), Positives = 368/479 (76%), Gaps = 4/479 (0%)

Query: 102 GWLGYPPLSGIAQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIF 161
           GWL YPPLS +  SPGVGVDYY+WSLQIAG+GTLLSGIN++ TI+K+RAPGM    MP+F
Sbjct: 1   GWLAYPPLSELDFSPGVGVDYYLWSLQIAGVGTLLSGINLVTTILKVRAPGMTYTRMPVF 60

Query: 162 TWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVY 221
            WTAL TN+LIVAAFP+LT+   + TLDRY+G HFFTN  GGN M+Y++LIW WGHPEVY
Sbjct: 61  CWTALATNLLIVAAFPILTATFAMLTLDRYLGFHFFTNGGGGNAMLYISLIWTWGHPEVY 120

Query: 222 ILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFF 281
           IL+LP FGIFSEVVSTFS K LFGY SM+ AT+ I +LS++VWLHHFFTMG+GANVNA F
Sbjct: 121 ILILPAFGIFSEVVSTFSGKPLFGYRSMIIATMAICILSFLVWLHHFFTMGAGANVNAVF 180

Query: 282 GITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANF 341
           GI TMII++PTG K+FNWLFTMY GR+RFEVP+LW +GFM+TFV+GGM GV++A+P A+F
Sbjct: 181 GIATMIIAVPTGVKVFNWLFTMYGGRVRFEVPMLWAVGFMVTFVLGGMTGVLMAIPPADF 240

Query: 342 LLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAF 401
           ++HNSLFLVAHFHNV+IGGV+FG+ +G  YWFPKAFG++L    GK +FW W +GFY+AF
Sbjct: 241 VVHNSLFLVAHFHNVVIGGVIFGVFAGYTYWFPKAFGFRLHEGLGKAAFWCWFLGFYLAF 300

Query: 402 MPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLID 461
           MPLY  G MG+TRRM H++D +   +  IA  G L+I  GIL    QL+VS R+R    D
Sbjct: 301 MPLYAAGLMGMTRRMQHYDDPNWVPYMHIAMVGALVILCGILCQAAQLVVSIRQRDQRRD 360

Query: 462 ITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMK----KNNFKFPKDKFQDILM 517
           +TGDPW+GR LEW+T+SPPP +NFA +P +H  +++W +K    K      + K++ I M
Sbjct: 361 LTGDPWDGRNLEWATTSPPPSFNFAVLPDVHGEEAYWGIKSLAIKQQRLVDEPKYEAIAM 420

Query: 518 PKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEIT 576
           P+N+  G++ S F+ + GFAL+WH+W L I+  +   ++ ++  +     + IS++E+ 
Sbjct: 421 PRNSPTGVVASFFAAVTGFALIWHIWWLVILGLLGAYVVFVFFAWRDVDEFVISADEVA 479


>gi|365892954|ref|ZP_09431179.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) (fragment) [Bradyrhizobium sp. STM 3809]
 gi|365330950|emb|CCE03710.1| cytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain
           A) (fragment) [Bradyrhizobium sp. STM 3809]
          Length = 423

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 283/416 (68%), Positives = 344/416 (82%)

Query: 170 ILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFG 229
           +LIVA+FPVLT+VL L +LDRY+GT+FFTND GG+ MMYVNLIWIWGHPEVYIL+LP FG
Sbjct: 1   MLIVASFPVLTAVLALLSLDRYVGTNFFTNDFGGDPMMYVNLIWIWGHPEVYILILPAFG 60

Query: 230 IFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIIS 289
           IFSEV STFS KRLFGY+SMVYATVVIT+LSY+VWLHHFFTMGSGA+VN+FFGITTMIIS
Sbjct: 61  IFSEVTSTFSGKRLFGYTSMVYATVVITILSYLVWLHHFFTMGSGASVNSFFGITTMIIS 120

Query: 290 IPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFL 349
           IPTGAK+FNWLFTMYRGRIRFE+P++WT+ FM+TFVIGGM GV+LAVP A+F+LHNSLFL
Sbjct: 121 IPTGAKMFNWLFTMYRGRIRFELPMMWTVAFMLTFVIGGMTGVLLAVPPADFVLHNSLFL 180

Query: 350 VAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGF 409
           VAHFHNVIIGGVLFGL +GI YWFPKAFG++L+PFWGK SFWFW +GFY AFMPLY+LG 
Sbjct: 181 VAHFHNVIIGGVLFGLFAGIAYWFPKAFGFRLDPFWGKMSFWFWTVGFYFAFMPLYVLGL 240

Query: 410 MGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNG 469
           MGVTRR+  F+D SLQIWF IA  G  LI +GI SF+IQ+ VS  +R  L D TGDPW+ 
Sbjct: 241 MGVTRRLRTFDDPSLQIWFVIAGVGAFLILLGIASFLIQIAVSVLRREQLADTTGDPWDA 300

Query: 470 RTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISI 529
           RTLEW+TSSPPP YNFAF P++H +D+WW MK+  +  P   F+ I MP NT  G++++ 
Sbjct: 301 RTLEWATSSPPPAYNFAFTPVVHDNDAWWDMKRRGYARPLAGFKAIHMPSNTGTGVILAG 360

Query: 530 FSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
            S  M F L+W+MW +   SF+  L + I +TFNY R+++I ++E+  +E+ R  L
Sbjct: 361 LSTTMAFGLIWYMWWMAAGSFVALLAVAIGHTFNYHRSFHIPADEVVSVERARTEL 416


>gi|75674966|ref|YP_317387.1| cytochrome c oxidase subunit I [Nitrobacter winogradskyi Nb-255]
 gi|74419836|gb|ABA04035.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Nitrobacter
           winogradskyi Nb-255]
          Length = 657

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 290/584 (49%), Positives = 399/584 (68%), Gaps = 6/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RG  DA+M+R QQA +F    GYLPP+H++QIFT+H  IM+FFVAMP V G+ + I+
Sbjct: 68  MLVRGVVDALMIRTQQAFAF-EPHGYLPPDHFDQIFTSHATIMMFFVAMPFVLGLFSIII 126

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           P QIGAR VAFPF+N    W+T  GA LVMISL +G F++  W  YPP SGI  SP VGV
Sbjct: 127 PQQIGARQVAFPFMNAAGLWLTVSGAALVMISLVVGRFSAAYWTAYPPQSGIQFSPDVGV 186

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW++ ++ IG +L+GI+ + TI+K RAPGMKLM MP+FTWTALCT+ILI+ A+P L 
Sbjct: 187 DYWIWAVLLSSIGAILAGISFLVTIVKRRAPGMKLMAMPLFTWTALCTSILIITAYPALI 246

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDR++G  FF    G  +  YV+L WIWGHP VYIL+LP  GI+SEVV+TFS 
Sbjct: 247 VAATLLGLDRHLGMQFFAGSNG--VANYVSLFWIWGHPHVYILILPACGIYSEVVATFSG 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           +RLFGY+++VY+ + IT+LS +VWLHHF T+GS A+V+AFFG    +I++PT   I  W 
Sbjct: 305 RRLFGYAALVYSMIAITVLSLVVWLHHFLTIGSAADVSAFFGRAAPLIAVPTIVTIVCWS 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T+YRG +RF VP+L+T+G+++TF+IGG+ G + AV  A   +H++ F VAHFHN++I G
Sbjct: 365 LTIYRGEVRFSVPMLFTLGYIVTFLIGGITGFLFAVVPAG--IHDTTFRVAHFHNLLIPG 422

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LFG  +G  YWFPKAFG++LE  WG+ +FW WL+GF +AFMPLYILG MG+ +R++  +
Sbjct: 423 ALFGYFAGYQYWFPKAFGFRLEEKWGRRAFWCWLVGFGLAFMPLYILGLMGMPQRLNRSD 482

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
               Q +   A  G LLI  G+    IQ+ VS R R  L   + DPWNGRTLEW+T+SPP
Sbjct: 483 VAEWQPYLIAAQAGVLLIVCGVAFLAIQIAVSIRDRKALAASSNDPWNGRTLEWATASPP 542

Query: 481 PVYNFAFIPLIHQSDSWWYMKK-NNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
             YNFA +P +   D WW MK+         +F DI+MP  ++ G+++   S +  FA++
Sbjct: 543 AAYNFAAVPPVQGIDPWWTMKQAGTADQGPARFHDIIMPGKSSAGVMLGAMSFVFAFAMI 602

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           WH+W L  +  +     V+  TF+      + + ++  IE +R+
Sbjct: 603 WHIWWLAAVGGLGMFAAVLSQTFHDHAGQRLPASDVEAIESRRL 646


>gi|226310780|ref|YP_002770674.1| quinol oxidase polypeptide I [Brevibacillus brevis NBRC 100599]
 gi|226093728|dbj|BAH42170.1| quinol oxidase polypeptide I [Brevibacillus brevis NBRC 100599]
          Length = 656

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 308/595 (51%), Positives = 406/595 (68%), Gaps = 20/595 (3%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A     +  +L  +HYN IFT HG IMI F+AMP++  + N +V
Sbjct: 71  MLFRGGVDALLMRVQLAFP---NVEFLHSDHYNAIFTTHGTIMILFMAMPMMFALFNMVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVA+PFLN LSFW+   GA+L  +S  IG     GWL YPPLS    SPG G 
Sbjct: 128 PLQLGARDVAYPFLNALSFWLFMLGAMLFNLSFVIGGSPDAGWLSYPPLSQNDFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN I TI+KMRAPGMKL  MP+F+W+ L + I+I+ AFP+LT
Sbjct: 188 NFYIWGIQISGIGSLATGINFIVTILKMRAPGMKLSKMPLFSWSVLSSCIMIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+V+P FGIFSE+V+TFS 
Sbjct: 248 VTLALLFLDRFAGAHFFTMDGGGNPMMYLNLIWMWGHPEVYIVVVPAFGIFSEIVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV+A ++I ++S+  W HHFFTMG+ A+V AFF I+TMI+ IPTG K+FNWL
Sbjct: 308 KKIFGYKSMVWAMMIIAVVSFFTWAHHFFTMGTSASVIAFFAISTMIVGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRI F+ P+LWTI F+  FVIGG  GV+LAV  A++  HNS FLVAHFH V+IGG
Sbjct: 368 FTMYRGRISFKQPMLWTIAFIPCFVIGGATGVMLAVAPADYQYHNSYFLVAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF- 419
           V+FG ++GI YW+PK FG+KL+   GK  FWFW IGFYV FMP Y LGFMG+TRR   + 
Sbjct: 428 VVFGYLAGIYYWWPKLFGFKLDEKLGKWGFWFWNIGFYVCFMPQYALGFMGMTRRYYTYG 487

Query: 420 -----EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEW 474
                 D++L     ++  G  ++ +G +  + Q  ++Y  +H   D TGDPWNGRTLEW
Sbjct: 488 WDRGWADLNL-----VSTVGAFMMGIGFIFQVWQ--IAYSIKHGERDTTGDPWNGRTLEW 540

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKK----NNFKFPKDKFQDILMPKNTNIGILISIF 530
           S  SP P YNFA +P + + D WW  K+      +K    K + I MPKN+ I  +++ F
Sbjct: 541 SIPSPAPFYNFAVVPQVKEMDDWWATKEAKANGTYKEQPAKLEPIHMPKNSGIPFIMANF 600

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
             ++GF   +    + +I FI     +   +F Y  +YY+  EE+   E    R+
Sbjct: 601 WFLVGFGFTFGWVWMAVIGFIGVFACMWARSFQYDTDYYVPVEEVRRTEASLGRV 655


>gi|295703990|ref|YP_003597065.1| cytochrome o quinol oxidase subunit I [Bacillus megaterium DSM 319]
 gi|294801649|gb|ADF38715.1| cytochrome o quinol oxidase, subunit I [Bacillus megaterium DSM
           319]
          Length = 655

 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/591 (52%), Positives = 403/591 (68%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A      + +L   HYN+IFT HG IMI F+AMPL+    N +V
Sbjct: 71  MLFRGGVDALLMRMQLAFP---QWHFLDSNHYNEIFTTHGTIMILFMAMPLMFAFFNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN +SFW+   GA+L  +S  IG     GWL YPPLSG+  SPG G 
Sbjct: 128 PLQIGARDVAYPFLNAVSFWLFFFGAMLFNLSFVIGGSPDAGWLSYPPLSGMQFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L SGIN I TI+KMRAPGMKLM+MP+FTW+ L + I+I+ AFPVLT
Sbjct: 188 DFYIWGIQISGIGSLASGINFIMTILKMRAPGMKLMHMPLFTWSVLASCIIIIFAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DR+   H FT   GGN MMY+NLIW+WGHPEVYI+VLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLFIDRFFDGHLFTMTGGGNPMMYINLIWMWGHPEVYIVVLPAFGIFSEIVATFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV++ ++I++LSY  W+HHFFTMG+GANVN FF ITTM I IPTG K+FNWL
Sbjct: 308 KKIFGYKSMVFSMMIISVLSYFTWVHHFFTMGAGANVNVFFAITTMAIGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI+   P+LWTI F+  FV+GG  GV+L+   A++  HNS FLVAHFH V+IGG
Sbjct: 368 FTMFRGRIQMTQPMLWTIAFIPCFVVGGATGVMLSAAPADYQYHNSYFLVAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LGFMG+TRR+  ++
Sbjct: 428 VVFGFFAGLYYWWPKMFGFKLNDRLGKWAFWTWNIGFYVCFMPQYALGFMGMTRRIYTYD 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLI--VSYRKRHTLIDITGDPWNGRTLEWSTS 477
            D+       I+  G   + +G +    Q++  + Y +R    D+TGDPWNGRTLEWS  
Sbjct: 488 FDMGWGPLNVISTVGAFFMGIGFIFQAWQILHGIKYGER----DVTGDPWNGRTLEWSIP 543

Query: 478 SPPPVYNFAFIPLIHQSDSWWYM---KKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           SPPP YNFA IP +   D+WW +   +K         F  I MPKN+ I  ++S+F  I 
Sbjct: 544 SPPPHYNFAVIPTVTGQDAWWTIKEERKKKKAKETATFSPIHMPKNSGIPFIMSVFWFIA 603

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           GF L +H   + I         ++  +F Y  +YYI  +EI   E    R+
Sbjct: 604 GFGLTFHWVWMAIFGLTGVGACLLARSFQYNSDYYIPVDEIRHTEDSVGRV 654


>gi|399050362|ref|ZP_10740543.1| heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Brevibacillus sp. CF112]
 gi|433546428|ref|ZP_20502752.1| quinol oxidase polypeptide I [Brevibacillus agri BAB-2500]
 gi|398051965|gb|EJL44272.1| heme/copper-type cytochrome/quinol oxidase, subunit 1
           [Brevibacillus sp. CF112]
 gi|432182280|gb|ELK39857.1| quinol oxidase polypeptide I [Brevibacillus agri BAB-2500]
          Length = 656

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 302/595 (50%), Positives = 408/595 (68%), Gaps = 20/595 (3%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MRLQ A     +  +L  +HYN IFT HG IMI F+AMP++ G+ N +V
Sbjct: 71  MLFRGGVDALLMRLQLAFP---NLEFLHADHYNAIFTTHGTIMILFMAMPMMFGLFNMVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  +S  IG     GWL YPPLS    SPG G 
Sbjct: 128 PLQIGARDVAYPFLNALSFWLFFLGAMLFNLSFVIGGSPDAGWLSYPPLSQNDFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +++IW +QI+GIG+L +GIN I TI+KMRAPGM L  MP+F+W+ L ++I+I+ AFP+LT
Sbjct: 188 NFWIWGIQISGIGSLATGINFIVTILKMRAPGMTLTKMPLFSWSVLSSSIMIIFAFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L  LDR+ G HFFT D GGN MMY+NLIW+WGHPEVYI+V+P FGIFSEVV+TFS 
Sbjct: 248 VTIALLFLDRFAGAHFFTMDGGGNPMMYLNLIWMWGHPEVYIVVVPAFGIFSEVVATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY SMV+A + I + S+  W HHFFTMG+ A+V AFF I+TM+I+IPTG K+FNWL
Sbjct: 308 KRIFGYKSMVWALMAIAIASFFTWAHHFFTMGTSASVIAFFAISTMVIAIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI F+ P+LWTI F+  F++GG  GV+LAV  A++  HNS FL+AHFH V+IGG
Sbjct: 368 FTMFRGRISFKQPMLWTIAFIPCFLVGGATGVMLAVAPADYQYHNSYFLIAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF- 419
           V+FG ++GI YW+PK FG+KL+   G+  FWFW IGFY+ FMP Y LGFMG+TRR   + 
Sbjct: 428 VVFGYLAGIYYWWPKLFGFKLDEKLGRWGFWFWNIGFYICFMPQYALGFMGMTRRYYTYG 487

Query: 420 -----EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEW 474
                ED++L     ++  G  ++ +G +  + Q  ++Y  +H   D TGDPW+ RTLEW
Sbjct: 488 WDRGWEDLNL-----VSTVGAFMMGIGFIFQVWQ--IAYSIKHGERDTTGDPWDARTLEW 540

Query: 475 STSSPPPVYNFAFIPLIHQSDSWWYMKK----NNFKFPKDKFQDILMPKNTNIGILISIF 530
           S  SP P YNFA +P + ++D WW  K+      +K      + I MPKN+ I I++S F
Sbjct: 541 SIPSPAPFYNFAVVPHVKEADDWWATKQAKANGTYKQEPAHLEPIHMPKNSGIPIIMSTF 600

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
             ++GF   +    + ++ FI   + +   +F Y  +YY+  +E+   E    R+
Sbjct: 601 WFLIGFGFTFGWVWMAVVGFIGVAVCMWVRSFQYDTDYYVPVDEVRRTEASLGRV 655


>gi|384047562|ref|YP_005495579.1| Quinol oxidase polypeptide I [Bacillus megaterium WSH-002]
 gi|345445253|gb|AEN90270.1| Quinol oxidase polypeptide I [Bacillus megaterium WSH-002]
          Length = 655

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 313/591 (52%), Positives = 403/591 (68%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A      + +L   HYN+IFT HG IMI F+AMPL+    N +V
Sbjct: 71  MLFRGGVDALLMRMQLAFP---QWHFLDSNHYNEIFTTHGTIMILFMAMPLMFAFFNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN +SFW+   GA+L  +S  IG     GWL YPPLSG+  SPG G 
Sbjct: 128 PLQIGARDVAYPFLNAVSFWLFFFGAMLFNLSFVIGGSPDAGWLSYPPLSGMQFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L SGIN I TI+KMRAPGMKLM+MP+FTW+ L + I+I+ AFPVLT
Sbjct: 188 DFYIWGIQISGIGSLASGINFIMTILKMRAPGMKLMHMPLFTWSVLASCIIIIFAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DR+   H FT   GGN MMY+NLIW+WGHPEVYI+VLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLFIDRFFDGHLFTMTGGGNPMMYINLIWMWGHPEVYIVVLPAFGIFSEIVATFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV++ ++I++LSY  W+HHFFTMG+GANVN FF ITTM I IPTG K+FNWL
Sbjct: 308 KKIFGYKSMVFSMMIISVLSYFTWVHHFFTMGAGANVNVFFAITTMAIGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI+   P+LWTI F+  FV+GG  GV+L+   A++  HNS FLVAHFH V+IGG
Sbjct: 368 FTMFRGRIQMTQPMLWTIAFIPCFVVGGATGVMLSAAPADYQYHNSYFLVAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LGFMG+TRR+  ++
Sbjct: 428 VVFGFFAGLYYWWPKMFGFKLNDRLGKWAFWTWNIGFYVCFMPQYALGFMGMTRRIYTYD 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLI--VSYRKRHTLIDITGDPWNGRTLEWSTS 477
            D+       I+  G   + +G +    Q++  + Y +R    D+TGDPWNGRTLEWS  
Sbjct: 488 FDMGWGPLNVISTVGAFFMGIGFIFQAWQILHGIKYGER----DVTGDPWNGRTLEWSIP 543

Query: 478 SPPPVYNFAFIPLIHQSDSWWYM---KKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           SPPP YNFA IP +   D+WW +   +K         F  I MPKN+ I  ++S+F  I 
Sbjct: 544 SPPPHYNFAVIPTVTGQDAWWTIKEERKKKKAKETAAFSPIHMPKNSGIPFIMSVFWFIA 603

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           GF L +H   + I         ++  +F Y  +YYI  +EI   E    R+
Sbjct: 604 GFGLTFHWVWVAIFGLTGVGACLLARSFQYNSDYYIPVDEIRHTEDSVGRV 654


>gi|294498631|ref|YP_003562331.1| cytochrome o quinol oxidase subunit I [Bacillus megaterium QM
           B1551]
 gi|294348568|gb|ADE68897.1| cytochrome o quinol oxidase, subunit I [Bacillus megaterium QM
           B1551]
          Length = 655

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 312/591 (52%), Positives = 404/591 (68%), Gaps = 13/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR+Q A      + +L   HYN+IFT HG IMI F+AMPL+    N +V
Sbjct: 71  MLFRGGIDALLMRIQLAFP---QWHFLDSNHYNEIFTTHGTIMILFMAMPLMFAFFNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN +SFW+   GA+L  +S  IG     GWL YPPLSG+  SPG G 
Sbjct: 128 PLQIGARDVAYPFLNAVSFWLFFFGAMLFNLSFVIGGSPDAGWLSYPPLSGMQFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           D+YIW +QI+GIG+L SGIN I TI+KMRAPGMKLM+MP+FTW+ L + I+I+ AFPVLT
Sbjct: 188 DFYIWGIQISGIGSLASGINFIMTILKMRAPGMKLMHMPLFTWSVLASCIIIIFAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DR+   H FT   GGN MMY+NLIW+WGHPEVYI+VLP FGIFSE+V+TFS 
Sbjct: 248 VTLALLFIDRFFDGHLFTMTGGGNPMMYINLIWMWGHPEVYIVVLPAFGIFSEIVATFSQ 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV++ ++I++LSY  W+HHFFTMG+GANVN FF ITTM I IPTG K+FNWL
Sbjct: 308 KKIFGYKSMVFSMMIISILSYFTWVHHFFTMGAGANVNVFFAITTMAIGIPTGVKVFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI+   P+LWTI F+  FV+GG  GV+L+   A++  HNS FLVAHFH V+IGG
Sbjct: 368 FTMFRGRIQMTQPMLWTIAFIPCFVVGGATGVMLSAAPADYQYHNSYFLVAHFHQVLIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG  +G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LGFMG+TRR+  ++
Sbjct: 428 VVFGFFAGLYYWWPKMFGFKLNDRLGKWAFWTWNIGFYVCFMPQYALGFMGMTRRIYTYD 487

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLI--VSYRKRHTLIDITGDPWNGRTLEWSTS 477
            D+       I+  G   + +G +    Q++  + Y +R    D+TGDPWNGRTLEWS  
Sbjct: 488 FDMGWGPLNVISTVGAFFMGIGFIFQAWQILHGIKYGER----DVTGDPWNGRTLEWSIP 543

Query: 478 SPPPVYNFAFIPLIHQSDSWWYM---KKNNFKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           SPPP YNFA IP +   D+WW +   +K         F  I MPKN+ I  ++++F  I 
Sbjct: 544 SPPPHYNFAVIPTVTGQDAWWAIKEERKKKKAKETAAFSAIHMPKNSGIPFIMAVFWFIA 603

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           GF L +H   + I+        ++  +F Y  +YYI  +EI   E    R+
Sbjct: 604 GFGLTFHWVWMAILGLTGVGACLLARSFQYNSDYYIPVDEIRHTEDSVGRV 654


>gi|392955462|ref|ZP_10320993.1| quinol oxidase polypeptide I [Bacillus macauensis ZFHKF-1]
 gi|391878389|gb|EIT86978.1| quinol oxidase polypeptide I [Bacillus macauensis ZFHKF-1]
          Length = 651

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 301/590 (51%), Positives = 403/590 (68%), Gaps = 11/590 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MRLQ A     +  +L  +HYN+IFT HG IMI F+AMP +  + N ++
Sbjct: 67  MLFRGGVDALLMRLQLA---APNTHFLTSQHYNEIFTTHGTIMILFMAMPFMFALFNIVI 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  +S  +G     GWL YPPLS IA SPG G 
Sbjct: 124 PLQIGARDVAYPFLNALSFWLFFFGALLFNLSFVVGGSPDAGWLSYPPLSEIAGSPGPGQ 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN + TI+KMRAPGMKLM MP+F+W+ L + I I+ AFPVLT
Sbjct: 184 NFYIWGIQISGIGSLATGINFLVTILKMRAPGMKLMKMPLFSWSVLSSCITIIFAFPVLT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DRY+G H FT D  GN MMYVNLIW+WGHPEVYI+VLP FGI+SE+VSTFS 
Sbjct: 244 VTLALLFVDRYLGAHIFTAD-SGNPMMYVNLIWMWGHPEVYIVVLPAFGIYSEIVSTFSK 302

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV++ ++I++L Y  W+HHFFTMG+GA+VN FF ITTM I IPTG KIFNWL
Sbjct: 303 KKIFGYKSMVFSMMIISILGYFTWVHHFFTMGAGADVNTFFAITTMAIGIPTGVKIFNWL 362

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI    P+LWTI F+  FV+GG  GV+LA+  A++  HNS FL+AHFH  +IGG
Sbjct: 363 FTMFRGRITISQPMLWTIAFIPCFVVGGATGVMLAIAPADYQYHNSYFLIAHFHQTLIGG 422

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+FG ++G+ YW+PK FG+KL    GK +FW W IGFYV FMP Y LGFMG+TRR+  + 
Sbjct: 423 VVFGYLAGLYYWWPKMFGFKLNERLGKWAFWTWNIGFYVCFMPQYALGFMGMTRRVYTYG 482

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+    +  ++  G  L+ +G +    Q++ S +      D+TGDPWNGRTLEWS  SP
Sbjct: 483 WDMGWAPFNMVSTVGAFLMGIGFIFQAWQILYSIKNGEK--DVTGDPWNGRTLEWSIPSP 540

Query: 480 PPVYNFAFIPLIHQSDSWWYMKK----NNFKFPKDKFQDILMPKNTNIGILISIFSLIMG 535
            P+YNFA IP +   D WW  KK    + +K    +++ I MPK + I  ++S    ++G
Sbjct: 541 APLYNFAVIPEVKHDDDWWETKKAMADSQYKKEPPQYEPIHMPKQSGIPFIMSACWFVVG 600

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           F   +    + +   +   + ++  +F  + +YYI  +E+   E    R+
Sbjct: 601 FGFTFGWSYVGLAGLLGVGLCLLARSFQQETDYYIPVDEVRKTEASLGRV 650


>gi|359779599|ref|ZP_09282826.1| cytochrome-c oxidase [Pseudomonas psychrotolerans L19]
 gi|359372215|gb|EHK72779.1| cytochrome-c oxidase [Pseudomonas psychrotolerans L19]
          Length = 687

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 283/578 (48%), Positives = 405/578 (70%), Gaps = 6/578 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RG  + VMMR QQA++  +  GYLPPEH+ Q+F+ HG IM+FFVAMP +TG+INF++
Sbjct: 78  MFSRGVVEGVMMRTQQALAIDAP-GYLPPEHFGQLFSTHGTIMVFFVAMPFLTGLINFVM 136

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDV FP LN +S W+T  GA LVM+SL +G F++ GW GYPP +G    PGVG 
Sbjct: 137 PLQIGARDVRFPLLNAISLWLTVAGAALVMVSLVLGRFSTGGWSGYPPYTGAEYQPGVGP 196

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+L ++ IG+ L+G+N   T+ K R PGM+L +M +F+WTALCT+IL++ A P LT
Sbjct: 197 DYWIWALTLSSIGSTLTGLNFAVTLYKERTPGMRLFHMTLFSWTALCTSILMIFAMPPLT 256

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
               L  LDRY+  HFFTN  GGN+M Y+NL W++GHPEVYIL+LP FG+FSEV +TFS+
Sbjct: 257 VATLLLALDRYLDFHFFTNTQGGNLMNYINLFWLFGHPEVYILILPAFGVFSEVFATFST 316

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRL+GY S+V+AT+VI +LS+ VWLHHFFTMG    +NA FGI TM+I IPTG KI++W+
Sbjct: 317 KRLYGYHSLVWATLVIAVLSFTVWLHHFFTMGQSPKINAAFGIATMLIGIPTGVKIYDWM 376

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TM+RGRIR   P+++ + F++ FVIGG+ G+ LA P  ++ +HN+++LVAHFHN++I G
Sbjct: 377 ATMFRGRIRLTTPLIYAVMFIMLFVIGGLTGITLATPPVDYQVHNTVYLVAHFHNMLIPG 436

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMS--H 418
           +LFG+++G ++WFPKAFG++L+  WG+ +   + +GF +AFMPLY+LG  G+ RR    H
Sbjct: 437 MLFGMLAGYHFWFPKAFGFRLDERWGRIAALNFGLGFLLAFMPLYVLGVSGLPRRSQAIH 496

Query: 419 FEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSS 478
             D +  +W  +A  G +++   + S +IQL+VS R R +     GDPWNGRTLEW+ ++
Sbjct: 497 NPDFAPLLW--VAELGAVILLAALASLVIQLVVSIRHRDSARVPVGDPWNGRTLEWAVAA 554

Query: 479 PPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFA 537
           PPP YNFA    I+  D + ++K++   + + + + DI +PKN+ +  ++        F 
Sbjct: 555 PPPEYNFAVPLPINDRDPFTWLKEHGLAYDRPRTYADIELPKNSAVPAIVGAAGFACAFG 614

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEI 575
           LVWH+  L ++   +    VI  +F       IS+ +I
Sbjct: 615 LVWHIGWLAVLGLGVAWGAVIARSFQRDTERLISAADI 652


>gi|406946588|gb|EKD77742.1| Cytochrome O ubiquinol oxidase subunit I, partial [uncultured
           bacterium]
          Length = 491

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 285/472 (60%), Positives = 357/472 (75%), Gaps = 6/472 (1%)

Query: 119 GVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPV 178
           GVDYYIW+LQIAG+G+LLSGIN + TI+KMR PGM LM MP+FTWTALC+ IL+  AFP+
Sbjct: 1   GVDYYIWALQIAGVGSLLSGINFMVTILKMRCPGMSLMKMPVFTWTALCSMILVALAFPI 60

Query: 179 LTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTF 238
            T+ L +  LDR++G HFFT   GGN MMY+NLIW WGHPEVYIL+LP FGIFSEVV+TF
Sbjct: 61  FTATLAMLFLDRFLGMHFFTAGHGGNAMMYINLIWAWGHPEVYILILPAFGIFSEVVATF 120

Query: 239 SSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFN 298
             K+LFGY+SM+YATV ITLLS++VWLHHFFTMGSGANVNAFFGI TMII+IPTG KIFN
Sbjct: 121 CRKKLFGYTSMIYATVSITLLSFVVWLHHFFTMGSGANVNAFFGIATMIIAIPTGVKIFN 180

Query: 299 WLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVII 358
           WLFTMYRGR+ F VP+LWTIGF+ TF IGGM GV++++P  +F LHNS+FLVAHFHNVII
Sbjct: 181 WLFTMYRGRVTFSVPMLWTIGFISTFAIGGMTGVVMSLPPVDFQLHNSVFLVAHFHNVII 240

Query: 359 GGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSH 418
           GGV+FG  +GI YWFPK FG++L   WGK SFW WL+GFYVAF PLY LG MG+TRR+ H
Sbjct: 241 GGVVFGYFAGITYWFPKLFGFELNEKWGKRSFWCWLVGFYVAFTPLYALGLMGMTRRLDH 300

Query: 419 F-EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWST 476
           +           IAAFG  +I  G+   IIQ+IVS ++R    D+TGD W NGRTLEWS 
Sbjct: 301 YAAGNGWHPLLMIAAFGACIIGAGVACQIIQVIVSIKEREKTRDLTGDVWVNGRTLEWSI 360

Query: 477 SSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQ----DILMPKNTNIGILISIFSL 532
            SP P YNFA  P++ + D++W MK+ N   P  + Q    DI MP+NT++G +I++F  
Sbjct: 361 PSPAPFYNFAATPVVSERDAYWDMKEKNTLNPNIQLQSHYADIHMPRNTSVGFIIAVFCG 420

Query: 533 IMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           I GF +VWH++ +  +  +      +  TFN   +YY++S+EI  +EK+R+R
Sbjct: 421 IFGFGMVWHIFWMIGLGLVGVFATAMSRTFNQNLDYYLTSDEIVKLEKERMR 472


>gi|452990132|emb|CCQ98706.1| cytochrome aa3-600 quinol oxidase (subunit I) [Clostridium
           ultunense Esp]
          Length = 653

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/585 (51%), Positives = 401/585 (68%), Gaps = 14/585 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q A     +  +L  EHYNQIFT HG IMI F+AMPL+  + N +V
Sbjct: 71  MLFRGGVDALLMRTQLAFP---NMEFLNSEHYNQIFTTHGTIMILFMAMPLMFALFNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQ+GARDVA+PFLN +SFW+   GA+L  +S  +G     GWL YPPLS    SPG G 
Sbjct: 128 PLQLGARDVAYPFLNAVSFWLFFFGAMLFNLSFVVGGSPDAGWLSYPPLSENTFSPGPGQ 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++YIW +QI+GIG+L +GIN + TI+KMRAPGM LM MP+F+W+ L + I I+ AFPVLT
Sbjct: 188 NFYIWGIQISGIGSLATGINFLVTILKMRAPGMSLMKMPLFSWSVLSSCIAIIFAFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L  +DR+ G HFFT D GGN M Y+NLIW+WGHPEVYI+VLP FGIFSEVVSTF+ 
Sbjct: 248 VTLGLLFVDRFFGAHFFTLDGGGNPMFYINLIWMWGHPEVYIVVLPAFGIFSEVVSTFAR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K++FGY SMV+A V I+LLS+  W+HHFFTM S   V+AFF +TTM ++IPTG K+FNWL
Sbjct: 308 KKIFGYKSMVFALVSISLLSFFTWVHHFFTMASN-TVDAFFAVTTMAVAIPTGVKVFNWL 366

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM+RGRI+ + P+LW  GF+ TF++GG  GV+LAV  ANF  HN+ FL+AHFH V+IGG
Sbjct: 367 FTMFRGRIQMKTPMLWMTGFIPTFLVGGATGVMLAVAPANFQYHNNYFLIAHFHQVLIGG 426

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG  +G+ YW+PK FG+ L  + GK +FW W IGFYV FMP Y LG MG+ RR   + 
Sbjct: 427 VTFGFFAGMYYWWPKVFGFMLNEYLGKWAFWLWNIGFYVTFMPQYALGLMGMPRRSYTYG 486

Query: 421 -DISLQIWFQIAAFGTLLIAMGILSFIIQLIVS--YRKRHTLIDITGDPWNGRTLEWSTS 477
            D+       ++  G  L+  G +  + Q++ S  +R+R    D+TGDPW+GRTLEWS  
Sbjct: 487 WDMGWWPLNFVSTIGAFLMGAGFVFQVWQIVYSIIHRQR----DLTGDPWDGRTLEWSIP 542

Query: 478 SPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGF 536
           SPPPVYNFA IP + + D WWY K+N     K  K++ I MPK++ I  +   F  + GF
Sbjct: 543 SPPPVYNFAVIPQVEKQDDWWYKKQNGSHRNKAVKYKPIHMPKDSGIPFITGFFWFVAGF 602

Query: 537 ALVWHMWLLTIISFIITLIIVIYNTFNYKR-NYYISSEEITCIEK 580
              +  W+   +S +I + + ++  +  K  +YYI +E++   E 
Sbjct: 603 GFTFE-WVWIGLSGLIGVAVSLFTRYLQKDTDYYIPAEQVEATES 646


>gi|114330711|ref|YP_746933.1| cytochrome-c oxidase [Nitrosomonas eutropha C91]
 gi|114307725|gb|ABI58968.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Nitrosomonas
           eutropha C91]
          Length = 703

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 292/586 (49%), Positives = 416/586 (70%), Gaps = 5/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML R   +AV+MR Q A+  G   G+L  +H+ Q+F+ HG IMIFF+AMP +TG+IN++V
Sbjct: 90  MLTRAIAEAVLMRAQGAVGLGG--GFLSSDHFAQLFSTHGTIMIFFMAMPFLTGLINYVV 147

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN++S W+T+ GA LVMISL +G F++ GW GYPP +    +PG+GV
Sbjct: 148 PLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNPGIGV 207

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSL +A +G+ L+GIN+  TI K RAPGMKL  MP+FTWTALCT I+++ A P LT
Sbjct: 208 DYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAMPPLT 267

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
            V     LDRY+  HFFTN LGGN M ++N+ W++GHPEVYIL+LP FG++SE+ STFS 
Sbjct: 268 VVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG 327

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY S+V+AT+ I  LS++VWLHHFFTMG   ++NA FGI +M+I IPTG KI++W+
Sbjct: 328 KVLFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWM 387

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           +TM RGRIRF VP+++++ F+  FVIGG+ G++LA P  ++ +HN++FLVAHFHN+++ G
Sbjct: 388 WTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFHNMVVPG 447

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           VLFG+++G  +WFPKAFG++L+  WG+ S + W+ G+  AF PLYILG MG+ RR   +E
Sbjct: 448 VLFGMLAGYTFWFPKAFGFRLDERWGRISAYCWIFGWMGAFFPLYILGLMGLPRRSVAYE 507

Query: 421 DISLQIWFQIAAF-GTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             S  +  +I AF G LL+A  +++ +IQL VS + R       GDPWNGR+LEW+TS+P
Sbjct: 508 QAS-YVPLEIVAFVGALLVAAALMALVIQLWVSIKYREKNRVFVGDPWNGRSLEWATSAP 566

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFAL 538
           PP YNF  +P I+  D++   K+    + + D + +I +P+N+ +G +    S ++ F L
Sbjct: 567 PPEYNFPVVPSINDRDAFTAAKEFGVGYQEPDAYVNIEIPQNSAMGPVFGGTSFLLAFGL 626

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           VW +W L I++ +IT+  ++   F       I +E +    +  I+
Sbjct: 627 VWQIWWLVILTGLITIGTLVMRGFQRDTLKIIPAEAVCRTHQHWIQ 672


>gi|417710985|ref|ZP_12359992.1| ubiquinol oxidase subunit 1 [Shigella flexneri K-272]
 gi|417715651|ref|ZP_12364587.1| ubiquinol oxidase subunit 1 [Shigella flexneri K-227]
 gi|333010889|gb|EGK30315.1| ubiquinol oxidase subunit 1 [Shigella flexneri K-272]
 gi|333021387|gb|EGK40640.1| ubiquinol oxidase subunit 1 [Shigella flexneri K-227]
          Length = 451

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 279/382 (73%), Positives = 331/382 (86%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMP V G++N +V
Sbjct: 68  MLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSLQ++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS 
Sbjct: 248 VTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITMLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLE 382
           V+FG  +G+ YW+PKAFG+KL 
Sbjct: 428 VVFGCFAGMTYWWPKAFGFKLN 449


>gi|423480766|ref|ZP_17457456.1| quinol oxidase subunit 1 [Bacillus cereus BAG6X1-2]
 gi|401147063|gb|EJQ54572.1| quinol oxidase subunit 1 [Bacillus cereus BAG6X1-2]
          Length = 644

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 407/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVLGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMKMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D+TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDVTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF-PK-DKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK      PK D+ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPKADELKPIHMPSNSGVPIIMSAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWIAAIGGIGILACLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|152974416|ref|YP_001373933.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cytotoxicus NVH
           391-98]
 gi|152023168|gb|ABS20938.1| Cytochrome aa3 quinol oxidase subunit I [Bacillus cytotoxicus NVH
           391-98]
          Length = 644

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/583 (52%), Positives = 407/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMIIFMAMPFVMGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLN LSFW+   GA+L  I+  IG     GW  Y P++G   SPGVG 
Sbjct: 122 PLQIGARDVAFPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTMYFPMAGTEFSPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++ +N + TI+KMRAPGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTAVNFLVTILKMRAPGMKLMQMPMFTWSILVTTVIILFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE+VSTF+ 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIVSTFAR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I +LS +VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAIAILSGLVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F +++G  +W+PK  G+ L    GK +FW ++IGF + F P+Y LG  G+TRRM ++ 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERIGKWTFWIFMIGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+      QIA+ G +++ +G +     +I  Y  RH   D+TGDPW+GRTLEW+T SP
Sbjct: 482 ADLGWGWLNQIASVGAVMMGIGFILLAYNVI--YSIRHGERDVTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF-PK-DKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I  SD +W MKKN     PK ++ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQPYNFAKLPEIKHSDVFWEMKKNGESITPKAEELKPIHMPSNSGVPIIMSSFIGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L I+  I  +  +I+ +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAIVGGIGMVACMIWRSFDYDEGYYISVDEIKKTEH 642


>gi|420575277|ref|ZP_15070245.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-06]
 gi|420580596|ref|ZP_15075080.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-07]
 gi|420585941|ref|ZP_15079921.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-08]
 gi|420682034|ref|ZP_15166392.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-47]
 gi|420698360|ref|ZP_15180795.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-53]
 gi|420780100|ref|ZP_15252161.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-88]
 gi|420801421|ref|ZP_15271184.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-92]
 gi|391443300|gb|EIR03626.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-06]
 gi|391455317|gb|EIR14444.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-07]
 gi|391456172|gb|EIR15222.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-08]
 gi|391552378|gb|EIS01805.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-47]
 gi|391568158|gb|EIS15923.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-53]
 gi|391650986|gb|EIS88215.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-88]
 gi|391678190|gb|EIT12428.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-92]
          Length = 462

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 280/447 (62%), Positives = 351/447 (78%), Gaps = 1/447 (0%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +L+G+N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT  + L TLDRY+GT
Sbjct: 1   MLTGVNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILTVTVALLTLDRYLGT 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS KRLFGY+S+V+AT+
Sbjct: 61  HFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSRKRLFGYTSLVWATI 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
            IT+LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWLFTMY+GRI+    +
Sbjct: 121 AITVLSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIQINSAM 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+P
Sbjct: 181 LWTIGFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGGVVFGCFAGLTYWWP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           K+FG+ L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   +        +AA G
Sbjct: 241 KSFGFMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDINPEFHTMLMVAAGG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQS 494
             LIA GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPPP YNFA +P +   
Sbjct: 301 AALIACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPPPFYNFAVVPNVVDR 360

Query: 495 DSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIIT 553
           D +W MK+    + +  K+++I MPKNT  G++I+ FSLI GFA+VW++W L II F+  
Sbjct: 361 DEFWDMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMVWYIWWLAIIGFVGM 420

Query: 554 LIIVIYNTFNYKRNYYISSEEITCIEK 580
           ++  I  +F+   +YY+ + E+  IE 
Sbjct: 421 IVTWIVKSFDEDVDYYVPAAEVERIEN 447


>gi|423614060|ref|ZP_17589919.1| quinol oxidase subunit 1 [Bacillus cereus VD107]
 gi|401240231|gb|EJR46635.1| quinol oxidase subunit 1 [Bacillus cereus VD107]
          Length = 644

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVLGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+GIGTL++GIN + TI+KMR PGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGIGTLMTGINFLVTILKMRTPGMKLMKMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D+TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDVTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMK+         ++ + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKQRGETVTPAAEELKPIHMPSNSGVPIIASAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKKTEH 642


>gi|423455756|ref|ZP_17432609.1| quinol oxidase subunit 1 [Bacillus cereus BAG5X1-1]
 gi|401133632|gb|EJQ41256.1| quinol oxidase subunit 1 [Bacillus cereus BAG5X1-1]
          Length = 644

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVLGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+GIGTL++GIN + TI+KMR PGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGIGTLMTGINFLVTILKMRTPGMKLMKMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIMSAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|296284677|ref|ZP_06862675.1| cytochrome-c oxidase [Citromicrobium bathyomarinum JL354]
          Length = 701

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/586 (48%), Positives = 397/586 (67%), Gaps = 5/586 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGS----SFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGII 56
           ML RG  +  +MR  QA + G+      G + P+H+ Q+F+ HG IMIFFVAMPL+ G+I
Sbjct: 84  MLARGIIEGFVMRAHQASALGTLSAQEGGLVAPDHFAQLFSTHGTIMIFFVAMPLLIGLI 143

Query: 57  NFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSP 116
           NF++P Q+GARD+AFP LN +S  +T+ GA LVMISL +G+F + GW  YPP +G   SP
Sbjct: 144 NFVLPQQLGARDMAFPVLNQVSLGLTAAGAALVMISLLVGDFGTGGWTMYPPYTGKIFSP 203

Query: 117 GVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAF 176
           G GVDY++W++ I+G+G+ L+G+N   TI K RAPGM LM MP+F WT+LC  I+++ A 
Sbjct: 204 GEGVDYWLWAILISGLGSTLTGMNFAVTIFKQRAPGMHLMRMPLFCWTSLCVAIMLIYAM 263

Query: 177 PVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVS 236
           P LT    +  LDRY G HFFTN+ GGN+M Y N+ W++GHPEVYIL+LP FG+FSE+ S
Sbjct: 264 PALTVSSAMLALDRYAGFHFFTNEAGGNMMNYANIFWMFGHPEVYILILPAFGVFSEISS 323

Query: 237 TFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKI 296
           TFS KRL+GY+S+V A++ I ++S+ VWLHHFFTMG  A VN  FGI TM+I IPTG KI
Sbjct: 324 TFSGKRLYGYTSLVIASMSIAVISFTVWLHHFFTMGQSAGVNIAFGIATMVIGIPTGVKI 383

Query: 297 FNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNV 356
           ++W+ TM+RGR+R   PI++  GF + FVIGG++G+ILA P+ ++ +HNS FLVAHFHNV
Sbjct: 384 YDWMATMWRGRVRITTPIVYLTGFFLLFVIGGLSGIILANPSIDYQVHNSTFLVAHFHNV 443

Query: 357 IIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM 416
           II GVL+G+++GI+YWFPKAFG++L   WG+ + + ++ GF   FMPLY+LG MG+ RR 
Sbjct: 444 IIPGVLYGMLAGIHYWFPKAFGFRLSETWGRRTAFLFVAGFIFTFMPLYVLGLMGMPRRS 503

Query: 417 SHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWST 476
             F++     W  +AAFG +L+   + S I     SYR R  L    GDPWNG TLEWST
Sbjct: 504 PTFQNPDFLPWMYVAAFGGVLMLCALASLIWTFWTSYRHRAALAVPGGDPWNGSTLEWST 563

Query: 477 SSPPPVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLIMG 535
            +P P + F  IP +     W   K+    +    ++ DI MP NT  G+LI++ + ++G
Sbjct: 564 PAPVPEWTFPCIPHVTARHDWGERKRAGDPWHGPTEYTDIEMPANTAHGLLIAVAAFLLG 623

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           FA+VWH+W L I+  +    +++           I + ++   + +
Sbjct: 624 FAMVWHIWWLAILGVLAIPGLMLLRAMRVIEPRIIPAAQVAEADSR 669


>gi|403070468|ref|ZP_10911800.1| cytochrome aa3 quinol oxidase subunit I [Oceanobacillus sp. Ndiop]
          Length = 649

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/582 (51%), Positives = 402/582 (69%), Gaps = 6/582 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DAVMMRLQ A+   S   +L  +HYN++FT HGV+MIFF+AM  V G++N+IV
Sbjct: 67  MLFRGGADAVMMRLQTAVPENS---FLDAQHYNEVFTTHGVVMIFFMAMAFVIGLMNYIV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN LSFW+   GA+L  IS  IG     GW  Y PL+G   S  VGV
Sbjct: 124 PLQIGARDVAFPRLNALSFWLYFAGAMLFNISFVIGGSPDAGWTNYYPLAGTDFSTSVGV 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY W+LQI+GIGTL++GIN IATIIKMRAPGM LM MP+F W+AL TN++IV AFPVLT
Sbjct: 184 NYYNWALQISGIGTLMTGINFIATIIKMRAPGMTLMKMPMFVWSALITNVIIVFAFPVLT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + T DR  GT FF    GG  MM+ NL WIWGHPEVYIL+LP FGI+S+++STFS 
Sbjct: 244 IALLMGTFDRQFGTFFFATTNGGMDMMWANLFWIWGHPEVYILILPAFGIYSQIISTFSE 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           + L+GY SMV + V+I+LLS++VW+HHFFTMG  A  N+ F ITTM I++PTG KIFNWL
Sbjct: 304 RNLYGYKSMVASMVIISLLSFVVWVHHFFTMGQDAVTNSIFSITTMAIAVPTGIKIFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TM++G+IRF  P+L+++ F+  F IGG+ GV+LA+ +A++  HN++FLVAHFHNVII G
Sbjct: 364 LTMWKGKIRFTTPMLYSVAFIPLFTIGGVTGVMLAIASADYQYHNTMFLVAHFHNVIIPG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
           V+F +++G+ YW+PK FG+ L    GK +FWF  +GF +AF P+YI G  G  RRM ++ 
Sbjct: 424 VVFAMIAGLIYWWPKMFGFMLNERIGKWAFWFITVGFCLAFFPMYITGLDGQARRMYTYS 483

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           E         ++ FG  L+A+G +  II   V Y  R+   ++  DPWN R+LEW+T +P
Sbjct: 484 EATGFGPLNMLSFFGAGLLAIGFV--IIVYNVYYSFRYAPRNVGDDPWNARSLEWATHNP 541

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            P YNFA  P +  S++ W  KKN     K K ++I MP N+   I+++    ++GF+ V
Sbjct: 542 VPEYNFALTPNVVSSEALWDAKKNGHTLFKGKLEEIHMPNNSGAPIIMAGLFFVLGFSAV 601

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +++W   II+ I  LI + Y +F      +IS+EEI   E +
Sbjct: 602 FYIWPGVIIAGIGILICLAYRSFEKDHGRHISTEEIQETEDR 643


>gi|167829292|ref|ZP_02460763.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 9]
          Length = 468

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 273/451 (60%), Positives = 349/451 (77%), Gaps = 3/451 (0%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G 
Sbjct: 1   MLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
            I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PI
Sbjct: 121 AIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPI 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           K FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+SPPP YNFA IP +H
Sbjct: 301 AALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVH 360

Query: 493 QSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFI 551
             D + Y K+      K  +++DI MP NT+ G+ + +FSL++GFA VWH+W L I +  
Sbjct: 361 ALDEFAYRKERGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHIWWLAIAALA 420

Query: 552 ITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
             L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 GILVTVIAYSAGENDGYYIPADAVRRIEEKR 451


>gi|423556396|ref|ZP_17532699.1| quinol oxidase subunit 1 [Bacillus cereus MC67]
 gi|401195098|gb|EJR02059.1| quinol oxidase subunit 1 [Bacillus cereus MC67]
          Length = 644

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 405/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVLGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMKMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFV--ILCYNVIWSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIMSAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YY+S EEI   E 
Sbjct: 600 LVFSWFWIAAIGGIGILGCLIYRSFDYDDGYYVSIEEIKETEH 642


>gi|229028501|ref|ZP_04184621.1| Quinol oxidase subunit 1 [Bacillus cereus AH1271]
 gi|228732814|gb|EEL83676.1| Quinol oxidase subunit 1 [Bacillus cereus AH1271]
          Length = 647

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 298/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTVIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 603 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKETEH 645


>gi|423526087|ref|ZP_17502538.1| quinol oxidase subunit 1 [Bacillus cereus HuA4-10]
 gi|401164389|gb|EJQ71723.1| quinol oxidase subunit 1 [Bacillus cereus HuA4-10]
          Length = 644

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVLGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMKMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIMSAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWIAAIGGIGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|423473622|ref|ZP_17450364.1| quinol oxidase subunit 1 [Bacillus cereus BAG6O-2]
 gi|402425491|gb|EJV57638.1| quinol oxidase subunit 1 [Bacillus cereus BAG6O-2]
          Length = 644

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 405/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVLGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMKMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFV--ILCYNVIWSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIMSAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWIAAIGGIGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|423398421|ref|ZP_17375622.1| quinol oxidase subunit 1 [Bacillus cereus BAG2X1-1]
 gi|423409284|ref|ZP_17386433.1| quinol oxidase subunit 1 [Bacillus cereus BAG2X1-3]
 gi|401647081|gb|EJS64691.1| quinol oxidase subunit 1 [Bacillus cereus BAG2X1-1]
 gi|401655480|gb|EJS73010.1| quinol oxidase subunit 1 [Bacillus cereus BAG2X1-3]
          Length = 644

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 298/583 (51%), Positives = 403/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMKMPMFTWSILITTVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FLVAHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLVAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         ++ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPAAEELKPIHMPSNSGVPIIMSAFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILGCLIYRSFDYDEGYYISVDEIKETEH 642


>gi|229171485|ref|ZP_04299069.1| Quinol oxidase subunit 1 [Bacillus cereus MM3]
 gi|423404657|ref|ZP_17381830.1| quinol oxidase subunit 1 [Bacillus cereus BAG2X1-2]
 gi|423474707|ref|ZP_17451422.1| quinol oxidase subunit 1 [Bacillus cereus BAG6X1-1]
 gi|228612023|gb|EEK69261.1| Quinol oxidase subunit 1 [Bacillus cereus MM3]
 gi|401646292|gb|EJS63917.1| quinol oxidase subunit 1 [Bacillus cereus BAG2X1-2]
 gi|402438348|gb|EJV70363.1| quinol oxidase subunit 1 [Bacillus cereus BAG6X1-1]
          Length = 644

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 298/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLILCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|329907981|ref|ZP_08274760.1| Cytochrome O ubiquinol oxidase subunit I [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546842|gb|EGF31767.1| Cytochrome O ubiquinol oxidase subunit I [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 444

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/344 (82%), Positives = 318/344 (92%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGFTDA+MMR QQA +FG S G+LP  HY+QIFTAHGVIMIFFVAMPLVTG++N+++
Sbjct: 101 MLLRGFTDALMMRAQQAFAFGDSGGFLPAHHYDQIFTAHGVIMIFFVAMPLVTGLMNYVI 160

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNN SFWMT+ G +LVM SLF+GEFA TGWL YPPLSGI  SP VGV
Sbjct: 161 PLQIGARDVAFPFLNNFSFWMTAFGGMLVMASLFVGEFARTGWLAYPPLSGILSSPDVGV 220

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIWSLQ+AG+GTLLSGIN+IATI+KMRAPGM LM MPIF WT+LCTNIL+VAAFPVL 
Sbjct: 221 DYYIWSLQVAGVGTLLSGINLIATIVKMRAPGMTLMKMPIFIWTSLCTNILVVAAFPVLA 280

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +VL + +LDR +GT+FFTNDLGGN MMYVNLIWIWGHPEVYILVLP FG+FSE+V+TFSS
Sbjct: 281 AVLGMLSLDRMVGTNFFTNDLGGNSMMYVNLIWIWGHPEVYILVLPAFGVFSEIVATFSS 340

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGY+SMVYAT+VIT+LSYIVWLHHFFTMGSGA+VNAFFGITTMIISIPTGAKIFNWL
Sbjct: 341 KRIFGYTSMVYATLVITILSYIVWLHHFFTMGSGASVNAFFGITTMIISIPTGAKIFNWL 400

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLH 344
           FTMYRGRIRFEVP+LWTIGFMITFVIGGM GV+LAVPAA+F+LH
Sbjct: 401 FTMYRGRIRFEVPMLWTIGFMITFVIGGMTGVLLAVPAADFVLH 444


>gi|228996024|ref|ZP_04155679.1| Quinol oxidase subunit 1 [Bacillus mycoides Rock3-17]
 gi|229003640|ref|ZP_04161455.1| Quinol oxidase subunit 1 [Bacillus mycoides Rock1-4]
 gi|228757606|gb|EEM06836.1| Quinol oxidase subunit 1 [Bacillus mycoides Rock1-4]
 gi|228763720|gb|EEM12612.1| Quinol oxidase subunit 1 [Bacillus mycoides Rock3-17]
          Length = 644

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MMFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   SPGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFSPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMRAPGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFMVTILKMRAPGMKLMQMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE+VSTFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIVSTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MVY+ V I  LS +VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYTAMVYSMVAIAALSGLVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM ++ 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+      QIA+ G +++A+G       ++  Y  RH   D+TGDPW+ RTLEW+T SP
Sbjct: 482 ADLGWGGLNQIASVGAVMMAIGFALLCYNVV--YSIRHGERDVTGDPWDARTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF-PK-DKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I  SD +W MKKN     PK ++ + I MP NT + I++S    + GFA
Sbjct: 540 VQHYNFAKLPEIKSSDVFWEMKKNGETITPKPEELKPIHMPSNTGVPIIMSCLIGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L I+  I  L  +I+ +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAIVGGIGMLGCMIWRSFDYDDGYYVSVDEIKKTEH 642


>gi|167724806|ref|ZP_02408042.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei DM98]
          Length = 470

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 273/453 (60%), Positives = 348/453 (76%), Gaps = 5/453 (1%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G 
Sbjct: 1   MLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
            I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PI
Sbjct: 121 AIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPI 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           K FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+SPPP YNFA IP +H
Sbjct: 301 AALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVH 360

Query: 493 QSDSWWYMKKNNFKFPKDK---FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIIS 549
             D + Y K+        K   ++DI MP NT+ G+ + +FSL++GFA VWH+W L I +
Sbjct: 361 ALDEFAYRKERGLGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHIWWLAIAA 420

Query: 550 FIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
               L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 LAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 453


>gi|228989833|ref|ZP_04149813.1| Quinol oxidase subunit 1 [Bacillus pseudomycoides DSM 12442]
 gi|228769980|gb|EEM18563.1| Quinol oxidase subunit 1 [Bacillus pseudomycoides DSM 12442]
          Length = 644

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M+FRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MMFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   SPGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFSPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMRAPGMKLM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFMVTILKMRAPGMKLMQMPMFTWSILITCVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE+VSTFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIVSTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY++MVY+ V I  LS +VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYTAMVYSMVAIAALSGLVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM ++ 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+      QIA+ G +++A+G       ++  Y  RH   D+TGDPW+ RTLEW+T SP
Sbjct: 482 ADLGWGWLNQIASVGAVMMAIGFALLCYNVV--YSIRHGERDVTGDPWDARTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF-PK-DKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I  SD +W MKKN     PK ++ + I MP  T + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKSSDVFWEMKKNGETITPKPEELKPIHMPSTTGVPIIMSCFIGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L I+  I  L  +I+ +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAIVGGIGMLGCMIWRSFDYDDGYYVSVDEIKKTEH 642


>gi|423421198|ref|ZP_17398287.1| quinol oxidase subunit 1 [Bacillus cereus BAG3X2-1]
 gi|401099453|gb|EJQ07459.1| quinol oxidase subunit 1 [Bacillus cereus BAG3X2-1]
          Length = 644

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/583 (51%), Positives = 403/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFL--ILCYNVIWSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         ++ + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETVTPAAEEIKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|167820937|ref|ZP_02452617.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 91]
          Length = 470

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/453 (59%), Positives = 347/453 (76%), Gaps = 5/453 (1%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G 
Sbjct: 1   MLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +M YA+ 
Sbjct: 61  HFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMAYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
            I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PI
Sbjct: 121 AIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPI 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           K FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+SPPP YNFA IP +H
Sbjct: 301 AALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVH 360

Query: 493 QSDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIIS 549
             D + Y K+           +++DI MP NT+ G+ + +FSL++GFA VWH+W L I +
Sbjct: 361 ALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHIWWLAIAA 420

Query: 550 FIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
               L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 LAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 453


>gi|229159781|ref|ZP_04287789.1| Quinol oxidase subunit 1 [Bacillus cereus R309803]
 gi|228623718|gb|EEK80536.1| Quinol oxidase subunit 1 [Bacillus cereus R309803]
          Length = 647

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T ++I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTVIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLILCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWFMKKRGETVIPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDDGYYVSVDEIKETEH 645


>gi|229083936|ref|ZP_04216239.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-44]
 gi|228699371|gb|EEL52053.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-44]
          Length = 644

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 406/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPDT-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   +PGVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFIGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NFYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMKMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ + I+LLS++VWLHHFFTMGSG  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMIAISLLSFVVWLHHFFTMGSGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FVIGG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVIGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERIGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     ++  +  RH   D TGDPWNGRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVV--WSARHGERDTTGDPWNGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF-PK-DKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MK+      PK D+ + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAYWFMKQRGETITPKADELKPIHMPSNSGVPIIMSSFIGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L II  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFGLAIIGGIGMLACMIYRSFDYDDGYYVSVDEIKKTEH 642


>gi|167850765|ref|ZP_02476273.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei B7210]
          Length = 469

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/452 (59%), Positives = 346/452 (76%), Gaps = 5/452 (1%)

Query: 136 LSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTH 195
           L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G H
Sbjct: 1   LTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGMH 60

Query: 196 FFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVV 255
           FFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +M YA+  
Sbjct: 61  FFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMAYASCA 120

Query: 256 ITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPIL 315
           I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PIL
Sbjct: 121 IMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPIL 180

Query: 316 WTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPK 375
           WTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFPK
Sbjct: 181 WTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFPK 240

Query: 376 AFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGT 435
            FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G 
Sbjct: 241 VFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGA 300

Query: 436 LLIAMGILSFIIQLIVSYRKRHTL--IDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQ 493
            LIA+GI   ++QL VS R R  L   D TGDPW GRTLEW+T+SPPP YNFA IP +H 
Sbjct: 301 ALIAIGIACQLLQLAVSLRDRRLLENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVHA 360

Query: 494 SDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISF 550
            D + Y K+           +++DI MP NT+ G+ + +FSL++GFA VWH+W L I + 
Sbjct: 361 LDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHIWWLAIAAL 420

Query: 551 IITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
              L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 AGILVTVIAYSAGENDGYYIPADAVRRIEEKR 452


>gi|167743747|ref|ZP_02416521.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 14]
          Length = 470

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/453 (59%), Positives = 348/453 (76%), Gaps = 5/453 (1%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G 
Sbjct: 1   MLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
            I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PI
Sbjct: 121 AIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPI 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           K FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+SPPP YNFA IP +H
Sbjct: 301 AALIAIGIACQLLQLAVSLRDRRRPESRDPTGDPWGGRTLEWATASPPPAYNFATIPTVH 360

Query: 493 QSDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIIS 549
             D + Y K+           +++DI MP NT+ G+ + +FSL++GFA VWH+W L I +
Sbjct: 361 ALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHVWWLAIAA 420

Query: 550 FIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
               L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 LAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 453


>gi|163938626|ref|YP_001643510.1| cytochrome aa3 quinol oxidase subunit I [Bacillus
           weihenstephanensis KBAB4]
 gi|229056469|ref|ZP_04195881.1| Quinol oxidase subunit 1 [Bacillus cereus AH603]
 gi|423370084|ref|ZP_17347512.1| quinol oxidase subunit 1 [Bacillus cereus VD142]
 gi|423485921|ref|ZP_17462603.1| quinol oxidase subunit 1 [Bacillus cereus BtB2-4]
 gi|423491645|ref|ZP_17468289.1| quinol oxidase subunit 1 [Bacillus cereus CER057]
 gi|423501562|ref|ZP_17478179.1| quinol oxidase subunit 1 [Bacillus cereus CER074]
 gi|423508663|ref|ZP_17485194.1| quinol oxidase subunit 1 [Bacillus cereus HuA2-1]
 gi|423515480|ref|ZP_17491961.1| quinol oxidase subunit 1 [Bacillus cereus HuA2-4]
 gi|423596832|ref|ZP_17572858.1| quinol oxidase subunit 1 [Bacillus cereus VD048]
 gi|423664676|ref|ZP_17639841.1| quinol oxidase subunit 1 [Bacillus cereus VDM022]
 gi|423666501|ref|ZP_17641530.1| quinol oxidase subunit 1 [Bacillus cereus VDM034]
 gi|423677453|ref|ZP_17652388.1| quinol oxidase subunit 1 [Bacillus cereus VDM062]
 gi|163860823|gb|ABY41882.1| Cytochrome aa3 quinol oxidase subunit I [Bacillus
           weihenstephanensis KBAB4]
 gi|228720866|gb|EEL72416.1| Quinol oxidase subunit 1 [Bacillus cereus AH603]
 gi|401075165|gb|EJP83554.1| quinol oxidase subunit 1 [Bacillus cereus VD142]
 gi|401152795|gb|EJQ60224.1| quinol oxidase subunit 1 [Bacillus cereus CER074]
 gi|401159465|gb|EJQ66849.1| quinol oxidase subunit 1 [Bacillus cereus CER057]
 gi|401167261|gb|EJQ74554.1| quinol oxidase subunit 1 [Bacillus cereus HuA2-4]
 gi|401218922|gb|EJR25592.1| quinol oxidase subunit 1 [Bacillus cereus VD048]
 gi|401292699|gb|EJR98354.1| quinol oxidase subunit 1 [Bacillus cereus VDM022]
 gi|401305638|gb|EJS11173.1| quinol oxidase subunit 1 [Bacillus cereus VDM034]
 gi|401306346|gb|EJS11838.1| quinol oxidase subunit 1 [Bacillus cereus VDM062]
 gi|402440883|gb|EJV72868.1| quinol oxidase subunit 1 [Bacillus cereus BtB2-4]
 gi|402457959|gb|EJV89714.1| quinol oxidase subunit 1 [Bacillus cereus HuA2-1]
          Length = 644

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 405/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  YW+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTYWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++A+G L  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMAIGFL--ILCYNVIWSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWIAAIGGIGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|420623606|ref|ZP_15113613.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-15]
 gi|420692581|ref|ZP_15175711.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-52]
 gi|420725989|ref|ZP_15204577.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-59]
 gi|420731571|ref|ZP_15209594.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-60]
 gi|420736592|ref|ZP_15214129.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-61]
 gi|420774482|ref|ZP_15247217.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-76]
 gi|420785696|ref|ZP_15257053.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-89]
 gi|391488724|gb|EIR44537.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-15]
 gi|391566965|gb|EIS14883.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-52]
 gi|391597093|gb|EIS40947.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-60]
 gi|391598263|gb|EIS42004.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-59]
 gi|391611515|gb|EIS53682.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-61]
 gi|391647352|gb|EIS84987.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-76]
 gi|391655495|gb|EIS92230.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-89]
          Length = 458

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/443 (62%), Positives = 347/443 (78%), Gaps = 1/443 (0%)

Query: 139 INMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFT 198
           +N  ATI+KMRAPGM +M MP+FTW A CTNILI+ +FP+LT  + L TLDRY+GTHFFT
Sbjct: 1   MNFFATILKMRAPGMSMMKMPVFTWAAFCTNILIIVSFPILTVTVALLTLDRYLGTHFFT 60

Query: 199 NDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITL 258
           ND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSEV +TFS KRLFGY+S+V+AT+ IT+
Sbjct: 61  NDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEVTATFSRKRLFGYTSLVWATIAITV 120

Query: 259 LSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTI 318
           LS+IVWLHHFFTMGSGANVNAFFGI TMIISIPTG KIFNWLFTMY+GRI+    +LWTI
Sbjct: 121 LSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIQINSAMLWTI 180

Query: 319 GFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFG 378
           GF++TF IGGM GV+LAVP ANF+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PK+FG
Sbjct: 181 GFIVTFSIGGMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGGVVFGCFAGLTYWWPKSFG 240

Query: 379 YKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLI 438
           + L   WG  +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   +        +AA G  LI
Sbjct: 241 FMLNEKWGIRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDINPEFHTMLMVAAGGAALI 300

Query: 439 AMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWW 498
           A GIL  +IQ+ VS R R    D+TGDPW  RTLEWSTSSPPP YNFA +P +   D +W
Sbjct: 301 ACGILCQVIQVFVSIRDREQNRDLTGDPWGARTLEWSTSSPPPFYNFAVVPNVVDRDEFW 360

Query: 499 YMKKNNFKFPK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIV 557
            MK+    + +  K+++I MPKNT  G++I+ FSLI GFA+VW++W L II F+  ++  
Sbjct: 361 DMKEKGEAYKRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMVWYIWWLAIIGFVGMIVTW 420

Query: 558 IYNTFNYKRNYYISSEEITCIEK 580
           I  +F+   +YY+ + E+  IE 
Sbjct: 421 IVKSFDEDVDYYVPAAEVERIEN 443


>gi|345022039|ref|ZP_08785652.1| cytochrome aa3 quinol oxidase subunit I [Ornithinibacillus
           scapharcae TW25]
          Length = 649

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/582 (51%), Positives = 405/582 (69%), Gaps = 6/582 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DAVMMRLQ A+   +   +L  +HYN++FT HGV+MI F+AM  + G++NF+V
Sbjct: 67  MLFRGGADAVMMRLQTAVPDNT---FLDAQHYNEVFTTHGVVMIIFMAMAFIIGMMNFVV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN +SFW+   GA+L  IS  IG     GW  Y PL+G   S  VGV
Sbjct: 124 PLQIGARDVAFPRLNAISFWLYFAGAMLFNISFVIGGSPDAGWTNYFPLAGTDFSETVGV 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY+W+LQI+G+GTL++GIN I TI KMRAPGM LM MP+FTW+AL TN++IV AFPVLT
Sbjct: 184 NYYMWALQISGLGTLMTGINFIVTIFKMRAPGMTLMKMPMFTWSALITNVIIVFAFPVLT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + T DR  GTHFF +  GG  M++ NL W+WGHPEVYIL+LP FG++SEV++TFS 
Sbjct: 244 IALLMGTFDRQFGTHFFASTNGGMDMLWANLFWVWGHPEVYILILPAFGVYSEVIATFSQ 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           + L+GY SMV + V+I+ +S++VW+HHFFTMG GA VN  F ITTM I++PTG KIFNWL
Sbjct: 304 RNLYGYKSMVGSMVLISFMSFLVWVHHFFTMGHGALVNGIFSITTMAIAVPTGIKIFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TM++G+IRF VP+L++IGF+  F IGG+ GV+LA+ +A++  HN++FLVAHFHNVII G
Sbjct: 364 LTMWKGKIRFTVPMLYSIGFIPLFTIGGVTGVMLAIASADYQYHNTMFLVAHFHNVIIPG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
           V+F +++G+ YW+PK FG+ L    GK  FWF  IGF +AF P+YI G  G  RRM ++ 
Sbjct: 424 VVFAMLAGLTYWWPKMFGFMLNERIGKWGFWFLSIGFCLAFFPMYITGLDGQARRMYTYS 483

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           E+        ++ FG  L+A+  +  +I   V Y  R+   ++  DPWN R+LEW+T +P
Sbjct: 484 EETGFGPLNMLSFFGAGLMAIAFI--LIVYNVYYSFRYAPRNVGQDPWNARSLEWATQTP 541

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            P YNFA  P+++ S+++W  KKN  +  KDK   I MP N+ + I+++ F  I GF+ V
Sbjct: 542 VPEYNFAVTPVVNSSEAYWDSKKNGHQLFKDKISKIHMPNNSGLPIIMAGFFFIFGFSFV 601

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + +W+  I+S +     + Y TF      YIS EEI   EK 
Sbjct: 602 FSIWVGVILSALGIFGCMAYRTFENDHGRYISEEEIHETEKN 643


>gi|229010130|ref|ZP_04167343.1| Quinol oxidase subunit 1 [Bacillus mycoides DSM 2048]
 gi|229131649|ref|ZP_04260530.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-ST196]
 gi|229165642|ref|ZP_04293414.1| Quinol oxidase subunit 1 [Bacillus cereus AH621]
 gi|228617816|gb|EEK74869.1| Quinol oxidase subunit 1 [Bacillus cereus AH621]
 gi|228651797|gb|EEL07753.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-ST196]
 gi|228751127|gb|EEM00940.1| Quinol oxidase subunit 1 [Bacillus mycoides DSM 2048]
          Length = 647

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 405/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  YW+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTYWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++A+G L  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMAIGFL--ILCYNVIWSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 603 LVFSWFWIAAIGGIGILGCLIYRSFDYDDGYYVSVDEIKETEH 645


>gi|167916042|ref|ZP_02503133.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 112]
          Length = 469

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/452 (59%), Positives = 347/452 (76%), Gaps = 5/452 (1%)

Query: 136 LSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTH 195
           L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G H
Sbjct: 1   LTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGMH 60

Query: 196 FFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVV 255
           FFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +MVYA+  
Sbjct: 61  FFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMVYASCA 120

Query: 256 ITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPIL 315
           I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PIL
Sbjct: 121 IMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPIL 180

Query: 316 WTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPK 375
           WTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFPK
Sbjct: 181 WTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFPK 240

Query: 376 AFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGT 435
            FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G 
Sbjct: 241 VFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGA 300

Query: 436 LLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQ 493
            LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+SPPP YNFA IP +H 
Sbjct: 301 ALIAIGIACQLLQLAVSLRDRRRPENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVHA 360

Query: 494 SDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISF 550
            D + Y K+           +++DI MP NT+ G+ + +FSL++GFA VWH+W L I + 
Sbjct: 361 LDEFAYRKERGLGLGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHIWWLAIAAL 420

Query: 551 IITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
              L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 AGILVTVIAYSAGENDGYYIPADAVRRIEEKR 452


>gi|423601842|ref|ZP_17577842.1| quinol oxidase subunit 1 [Bacillus cereus VD078]
 gi|401228241|gb|EJR34764.1| quinol oxidase subunit 1 [Bacillus cereus VD078]
          Length = 644

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 302/583 (51%), Positives = 405/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  YW+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTYWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++A+G L  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMAIGFL--ILCYNVIWSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         D+ + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETITPTADELKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWIAAIGGVGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|419958070|ref|ZP_14474136.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. cloacae GS1]
 gi|388608228|gb|EIM37432.1| cytochrome o ubiquinol oxidase subunit I [Enterobacter cloacae
           subsp. cloacae GS1]
          Length = 453

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/382 (71%), Positives = 328/382 (85%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           ML RGF DA+MMR QQA++     G+LPP HY+QIFTAHGVIMIFFVAMPLV G++N +V
Sbjct: 68  MLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVIGLMNVVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW T  G ILV +SL +GEFA TGWL YPPLSGI  SPGVGV
Sbjct: 128 PLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IW+LQ++G+GT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT
Sbjct: 188 DYWIWALQLSGVGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYILVLPVFG+FSE+ +TFS 
Sbjct: 248 VTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSEIAATFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY+S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWL
Sbjct: 308 KRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F   +LWTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGG
Sbjct: 368 FTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLE 382
           V+FG  +G+ YW+PK+     E
Sbjct: 428 VVFGCFAGVTYWWPKSVRLHAE 449


>gi|138897019|ref|YP_001127472.1| quinol oxidase subunit I [Geobacillus thermodenitrificans NG80-2]
 gi|134268532|gb|ABO68727.1| Quinol oxidase subunit I [Geobacillus thermodenitrificans NG80-2]
          Length = 648

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/590 (50%), Positives = 398/590 (67%), Gaps = 14/590 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q       +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLT---APNMNFLDAQHYNEIFTTHGTIMILFMAMPFIIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+G   SPGVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGAMLFNISFVIGGSPDAGWTAYFPLAGNEFSPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  SLQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T +LIV AFPVLT
Sbjct: 182 NYYAVSLQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTILITCVLIVFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR   T FFT   GG  M++ NL WIWGHPEVYI++LP FGIFSE+VSTF+ 
Sbjct: 242 VALALMTFDRLFDTQFFTMANGGMSMLWANLFWIWGHPEVYIVILPAFGIFSEIVSTFAQ 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MVY+ V I  LS+IVW+HHFFTMG+G  VN+ F ITTM ++IPTG KIFNWL
Sbjct: 302 KRLFGYKAMVYSIVGIAFLSFIVWVHHFFTMGAGPEVNSVFSITTMAVAIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IRF   +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLRKGKIRFTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F   +G++YW+PK FG+ L    GK +FW ++IGF V F P+Y LG MG+TRRM  + 
Sbjct: 422 VVFACFAGLHYWYPKMFGHMLNERLGKWTFWLFMIGFNVCFFPMYFLGLMGMTRRMYTYS 481

Query: 421 D----ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWST 476
           D      L +   +A  G +L+ +G +  ++   + Y  R+   D+TGDPWNGRTLEW+T
Sbjct: 482 DGLGWTPLNV---VATVGAVLMGIGFI--VLCYNIYYSARYGERDMTGDPWNGRTLEWAT 536

Query: 477 SSPPPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIM 534
           +SPP  YNF   P++   D++W MKK    F+  +++ + I MP N+     IS+   + 
Sbjct: 537 ASPPVHYNFPVTPIVDDLDAYWVMKKKQGGFQVKEEELKPIHMPSNSGRPFWISVAFFVA 596

Query: 535 GFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           GF LV+  + L I   +  ++ +I  +F     Y+I  +EI   E+   +
Sbjct: 597 GFGLVFKWFALAIAGALFIVLGLILRSFENDDGYHIGVDEIKRTERAARK 646


>gi|167899368|ref|ZP_02486769.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 7894]
          Length = 470

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/453 (59%), Positives = 348/453 (76%), Gaps = 5/453 (1%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G 
Sbjct: 1   MLTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
            I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PI
Sbjct: 121 AIMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPI 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           K FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KVFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+SPPP YNFA IP +H
Sbjct: 301 AALIAIGIACQLLQLAVSLRDRRRPENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVH 360

Query: 493 QSDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIIS 549
             D + Y K+           +++DI MP NT+ G+ + +FSL++GFA VWH+W L I +
Sbjct: 361 ALDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHVWWLAIAA 420

Query: 550 FIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
               L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 LAGILVTVIAYSAGENDGYYIPADAVRRIEEKR 453


>gi|218667210|ref|YP_002425121.1| cytochrome o ubiquinol oxidase subunit I [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218519423|gb|ACK80009.1| cytochrome o ubiquinol oxidase, subunit I [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 705

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 277/594 (46%), Positives = 399/594 (67%), Gaps = 12/594 (2%)

Query: 1   MLFRGFTDAVMMRLQQAIS--------FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLV 52
           MLFRGF D +M+R QQA +        FG++ GYL P H+ Q+++AHGVIMI   A PL+
Sbjct: 68  MLFRGFIDGLMIRTQQAWAVGPHSSGVFGATHGYLTPFHFGQVYSAHGVIMILLAATPLL 127

Query: 53  TGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGI 112
            G +N IVP+QIGARD+A+P+LN L  W T+    L+MISLF+G+FA  GW GY P+  +
Sbjct: 128 VGFMNIIVPIQIGARDMAYPYLNALGLWFTAAAGALIMISLFVGDFAHNGWFGYAPIFEL 187

Query: 113 AQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILI 172
             SPGVGVDY+IW++++  +GT L GIN++ATIIKMRAPGM    +PIF W ++ +N++ 
Sbjct: 188 QYSPGVGVDYWIWTMELLALGTTLGGINILATIIKMRAPGMTWGRLPIFVWASIASNVIA 247

Query: 173 VAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFS 232
           + +FP L   L L   DRY+G HFFT  LGGN+M+Y NL WIWGHPEVY ++LP FG+ S
Sbjct: 248 LTSFPALQVALALVAADRYLGAHFFTAGLGGNLMLYTNLFWIWGHPEVYFVILPAFGMMS 307

Query: 233 EVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPT 292
           E+  TFS K LFGY +MV A++ I  +S++VWLHHFFTMG+G  VN+ F + TM++ IPT
Sbjct: 308 EIFPTFSEKPLFGYMTMVLASMAIAGVSWLVWLHHFFTMGAGPYVNSAFSVATMLVGIPT 367

Query: 293 GAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAH 352
           G K+FNW FTMYRGR+ F   +LW IG +   ++GG+ G++LAVPA N+++HNS+F+VAH
Sbjct: 368 GVKVFNWAFTMYRGRLTFNAAMLWAIGALFLLLVGGLTGMMLAVPAINYMVHNSVFVVAH 427

Query: 353 FHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGV 412
           FH++++  +++ + + + YWFPK FG+KL  FW K  FW +  G  + F+P+Y+LGFMG+
Sbjct: 428 FHSMLL-TIVYAIFASVIYWFPKVFGFKLNEFWAKTMFWLFSAGTVLVFVPMYMLGFMGM 486

Query: 413 TRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRT 471
           TRR+ +  + +   +  +  FG ++  + +L+F   L VS R  H    +  D W   R+
Sbjct: 487 TRRLDYVFNTAWHPYLLVMEFGIVVYTLSVLAFFALLYVSVRD-HASNQVGADAWGTSRS 545

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIF 530
           LEW T SP P YNFA +P I+  D   + + N     + D ++DI MP NT + I++   
Sbjct: 546 LEWLTHSPVPFYNFAVLPHINARDEVAWRRDNGIDHVQPDHYEDIHMPNNTGVAIVLGGL 605

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           + ++GFALVW +W L   S +  + +VIY +F     Y I++ E+  +EK  +R
Sbjct: 606 TFVLGFALVWRIWWLCAFSLLAIIALVIYRSFKGDPGYIITAAELEQMEKAAMR 659


>gi|167923883|ref|ZP_02510974.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei BCC215]
          Length = 469

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 271/452 (59%), Positives = 347/452 (76%), Gaps = 5/452 (1%)

Query: 136 LSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTH 195
           L+G+N   TI++MRAPGM LM MP+FTWTALCTN+LI+A+FP+LT  L L  LDRY+G H
Sbjct: 1   LTGVNFFVTILRMRAPGMTLMKMPVFTWTALCTNVLIMASFPILTVTLALLGLDRYLGMH 60

Query: 196 FFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVV 255
           FFTND GGN M+Y+NLIW WGHPEVYIL+LP FGIFSEVV+T++ K LFGY +MVYA+  
Sbjct: 61  FFTNDAGGNAMLYLNLIWAWGHPEVYILILPAFGIFSEVVATYAKKPLFGYKTMVYASCA 120

Query: 256 ITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPIL 315
           I +LS++VWLHHFFTMGSGANVNAFFG+ TM+I+IPTG K+FNWLFT+YRGR+ F  PIL
Sbjct: 121 IMVLSFLVWLHHFFTMGSGANVNAFFGMMTMVIAIPTGVKVFNWLFTIYRGRLEFSTPIL 180

Query: 316 WTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPK 375
           WTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHNVIIGGVLFG ++G NYWFPK
Sbjct: 181 WTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFPK 240

Query: 376 AFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGT 435
            FG+KL    GK +FWFW +GFYVAF+PLY+LGFMG+TRR++H+++ +   W  +AA G 
Sbjct: 241 VFGFKLNETLGKAAFWFWQVGFYVAFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGA 300

Query: 436 LLIAMGILSFIIQLIVSY--RKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQ 493
            LIA+GI   ++QL VS   R+R    D TGDPW GRTLEW+T+SPPP YNFA IP +H 
Sbjct: 301 ALIAIGIACQLLQLAVSLRDRRRPENRDPTGDPWGGRTLEWATASPPPAYNFATIPTVHA 360

Query: 494 SDSWWYMKKNNFKF---PKDKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISF 550
            D + Y K+           +++DI MP NT+ G+ + +FSL++GFA VWH+W L I + 
Sbjct: 361 LDEFAYRKERGLGIGIGKPAEYRDIHMPSNTSAGLFVGVFSLVLGFAAVWHVWWLAIAAL 420

Query: 551 IITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
              L+ VI  +      YYI ++ +  IE+KR
Sbjct: 421 AGILVTVIAYSAGENDGYYIPADAVRRIEEKR 452


>gi|344199186|ref|YP_004783512.1| cytochrome c oxidase subunit I [Acidithiobacillus ferrivorans SS3]
 gi|343774630|gb|AEM47186.1| cytochrome c oxidase subunit I [Acidithiobacillus ferrivorans SS3]
          Length = 677

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 277/594 (46%), Positives = 397/594 (66%), Gaps = 12/594 (2%)

Query: 1   MLFRGFTDAVMMRLQQAIS--------FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLV 52
           MLFRGF D +M+R QQA +        FG++ GYL P H+ Q+++AHGVIMI   A PL+
Sbjct: 79  MLFRGFIDGLMIRTQQAWAVGAHSSGVFGATHGYLTPFHFGQVYSAHGVIMILLAATPLL 138

Query: 53  TGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGI 112
            G +N IVP+QIGARD+A+P+LN L  W+T+    L+MISLF+G+FA  GW GY P+  +
Sbjct: 139 VGFMNIIVPIQIGARDMAYPYLNALGLWLTAAAGALIMISLFVGDFAHNGWFGYAPIFEL 198

Query: 113 AQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILI 172
             SPGVGVDY+IW++++  +GT L GIN++ATIIKMRAPGM    +PIF W  L  N++ 
Sbjct: 199 QYSPGVGVDYWIWTMELVALGTTLGGINILATIIKMRAPGMTWGRLPIFVWATLSANVIA 258

Query: 173 VAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFS 232
           + +FP L   L L   DRY+G HFFT  LGGN+M+Y NL WIWGHPEVY ++LP FG+ S
Sbjct: 259 LTSFPALQVALALVAADRYLGAHFFTAGLGGNLMLYTNLFWIWGHPEVYFVILPAFGMMS 318

Query: 233 EVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPT 292
           E+  TFS K LFGY +MV A++ I  +S++VWLHHFFTMG+G  VN+ F + TM++ IPT
Sbjct: 319 EIFPTFSEKPLFGYITMVLASMAIAGVSWLVWLHHFFTMGAGPYVNSAFSVATMLVGIPT 378

Query: 293 GAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAH 352
           G K+FNW FTMYRGR+ F   +LW IG +   +IGG+ G++LA+PA N+++HNS+F+VAH
Sbjct: 379 GVKVFNWAFTMYRGRLTFNAAMLWAIGALFLLLIGGLTGMMLAIPAINYMVHNSVFVVAH 438

Query: 353 FHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGV 412
           FH +++  +++ + + + YWFPK FG+KL+ FW K  FW +  G  + F+P+Y+LGFMG+
Sbjct: 439 FHTMLL-VIVYAIFASVIYWFPKVFGFKLDEFWAKTMFWLFSAGTALVFVPMYMLGFMGM 497

Query: 413 TRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRT 471
           TRR+ +  +     +  +  FG  +  + +L+F+  L VS R  H    +  D W   R+
Sbjct: 498 TRRLDYVFNTVWHPYLLVMEFGIAVYMLSVLAFVALLYVSIRD-HAKNQVGADAWGTSRS 556

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIF 530
           LEW   SP P YNFA +P I   D   + + N     + D ++DI MP NT + I++   
Sbjct: 557 LEWLAHSPVPFYNFAVLPHISARDEVAWRRDNGIDHVQPDHYEDIHMPNNTGVAIILGGL 616

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           + ++GFALVW +W L  +S +  + +VIY +F     Y I++ E+  +EK+ +R
Sbjct: 617 TFVLGFALVWRIWWLCALSLLAIVALVIYRSFKGDPGYIITAAELEKMEKEALR 670


>gi|198282918|ref|YP_002219239.1| cytochrome-c oxidase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198247439|gb|ACH83032.1| Cytochrome-c oxidase [Acidithiobacillus ferrooxidans ATCC 53993]
          Length = 716

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 277/594 (46%), Positives = 399/594 (67%), Gaps = 12/594 (2%)

Query: 1   MLFRGFTDAVMMRLQQAIS--------FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLV 52
           MLFRGF D +M+R QQA +        FG++ GYL P H+ Q+++AHGVIMI   A PL+
Sbjct: 79  MLFRGFIDGLMIRTQQAWAVGPHSSGVFGATHGYLTPFHFGQVYSAHGVIMILLAATPLL 138

Query: 53  TGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGI 112
            G +N IVP+QIGARD+A+P+LN L  W T+    L+MISLF+G+FA  GW GY P+  +
Sbjct: 139 VGFMNIIVPIQIGARDMAYPYLNALGLWFTAAAGALIMISLFVGDFAHNGWFGYAPIFEL 198

Query: 113 AQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILI 172
             SPGVGVDY+IW++++  +GT L GIN++ATIIKMRAPGM    +PIF W ++ +N++ 
Sbjct: 199 QYSPGVGVDYWIWTMELLALGTTLGGINILATIIKMRAPGMTWGRLPIFVWASIASNVIA 258

Query: 173 VAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFS 232
           + +FP L   L L   DRY+G HFFT  LGGN+M+Y NL WIWGHPEVY ++LP FG+ S
Sbjct: 259 LTSFPALQVALALVAADRYLGAHFFTAGLGGNLMLYTNLFWIWGHPEVYFVILPAFGMMS 318

Query: 233 EVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPT 292
           E+  TFS K LFGY +MV A++ I  +S++VWLHHFFTMG+G  VN+ F + TM++ IPT
Sbjct: 319 EIFPTFSEKPLFGYMTMVLASMAIAGVSWLVWLHHFFTMGAGPYVNSAFSVATMLVGIPT 378

Query: 293 GAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAH 352
           G K+FNW FTMYRGR+ F   +LW IG +   ++GG+ G++LAVPA N+++HNS+F+VAH
Sbjct: 379 GVKVFNWAFTMYRGRLTFNAAMLWAIGALFLLLVGGLTGMMLAVPAINYMVHNSVFVVAH 438

Query: 353 FHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGV 412
           FH++++  +++ + + + YWFPK FG+KL  FW K  FW +  G  + F+P+Y+LGFMG+
Sbjct: 439 FHSMLL-TIVYAIFASVIYWFPKVFGFKLNEFWAKTMFWLFSAGTVLVFVPMYMLGFMGM 497

Query: 413 TRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRT 471
           TRR+ +  + +   +  +  FG ++  + +L+F   L VS R  H    +  D W   R+
Sbjct: 498 TRRLDYVFNTAWHPYLLVMEFGIVVYTLSVLAFFALLYVSVRD-HASNQVGADAWGTSRS 556

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIF 530
           LEW T SP P YNFA +P I+  D   + + N     + D ++DI MP NT + I++   
Sbjct: 557 LEWLTHSPVPFYNFAVLPHINARDEVAWRRDNGIDHVQPDHYEDIHMPNNTGVAIVLGGL 616

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           + ++GFALVW +W L   S +  + +VIY +F     Y I++ E+  +EK  +R
Sbjct: 617 TFVLGFALVWRIWWLCAFSLLAIIALVIYRSFKGDPGYIITAAELEQMEKAAMR 670


>gi|229016031|ref|ZP_04172987.1| Quinol oxidase subunit 1 [Bacillus cereus AH1273]
 gi|229022250|ref|ZP_04178795.1| Quinol oxidase subunit 1 [Bacillus cereus AH1272]
 gi|228739053|gb|EEL89504.1| Quinol oxidase subunit 1 [Bacillus cereus AH1272]
 gi|228745264|gb|EEL95310.1| Quinol oxidase subunit 1 [Bacillus cereus AH1273]
          Length = 644

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  YW+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTYWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFL--ILCYNVIWSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         ++ + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETVTPAAEEIKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|15614628|ref|NP_242931.1| cytochrome aa3 quinol oxidase subunit I [Bacillus halodurans C-125]
 gi|10174684|dbj|BAB05784.1| cytochrome aa3 quinol oxidase subunit I [Bacillus halodurans C-125]
          Length = 647

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 304/588 (51%), Positives = 404/588 (68%), Gaps = 16/588 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DAVMMR+Q A     +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDAVMMRMQLA---APNMTFLNSQHYNEIFTTHGTIMIIFMAMPFLIGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW    G  L  IS  IG   + GW  Y PL+    SPGVG 
Sbjct: 122 PLQIGARDVAFPFLNNLSFWTFFFGMALFNISFIIGGSPAAGWTSYFPLASNDFSPGVGQ 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y   LQ++GIGTL +GIN + TI+KMR  GM LM MP+FTWT L T+++IV AFPVLT
Sbjct: 182 NFYALGLQLSGIGTLATGINFLVTILKMRTKGMTLMKMPMFTWTVLITSLIIVLAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + T DR  GT FFT    G  M++ NL WIWGHPEVYI++LP FGIFS+++STF+ 
Sbjct: 242 VALAMMTFDRLFGTAFFTLQGQGLDMLWANLFWIWGHPEVYIVILPAFGIFSDIISTFAR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY++MV + VVI+ LS++VW+HHFFTMG+ A VN+FF ITTM ISIPTG KIFNW+
Sbjct: 302 KKLFGYNAMVASIVVISFLSFLVWVHHFFTMGNSAAVNSFFSITTMAISIPTGVKIFNWI 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+++GRIRF VP+LW+IGF+  FVIGG+ GV+LA+ AA++  HN+ FLV+HFH V+I G
Sbjct: 362 FTLHKGRIRFTVPMLWSIGFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F   +G+ YW+PK FG++L    GK  FW ++IGF V F P Y LG  G+ RR+  + 
Sbjct: 422 TVFACFAGLIYWYPKMFGHRLNETIGKWVFWVFMIGFNVCFFPQYFLGLDGMPRRI--YT 479

Query: 421 DISLQIWFQIAAF---GTLLIAMGILSFIIQLIVSYR--KRHTLIDITGDPWNGRTLEWS 475
            +    WF + A    G  ++A+G   F+  +  S+R  KR T    TGDPW+GR+LEW+
Sbjct: 480 YLESDNWFSLNAISTAGAFMMAIGFALFVYNIYFSWRYEKRET----TGDPWDGRSLEWA 535

Query: 476 TSSP-PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLI 533
           TSS  PP YNFA +P +   D++W MK+ + +   D  ++ + MP NT +G ++S    I
Sbjct: 536 TSSAVPPFYNFAKLPEVTDRDAFWTMKEKSIRLHADTNYEKVHMPSNTWLGFVMSFIMFI 595

Query: 534 MGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
             FALV+  + L IIS I   I +I  +F+Y   YY+S++EI  IE K
Sbjct: 596 ASFALVFSWFPLAIISGIGIFICMILRSFDYDEGYYVSAKEIQEIESK 643


>gi|423392913|ref|ZP_17370139.1| quinol oxidase subunit 1 [Bacillus cereus BAG1X1-3]
 gi|401632593|gb|EJS50378.1| quinol oxidase subunit 1 [Bacillus cereus BAG1X1-3]
          Length = 644

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 404/583 (69%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGMKLM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMKLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  YW+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTYWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L  I+   V +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFL--ILCYNVIWSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         ++ + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWFMKKRGETVTPAAEEIKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILGCLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|47568832|ref|ZP_00239526.1| quinol oxidase, subunit I [Bacillus cereus G9241]
 gi|47554508|gb|EAL12865.1| quinol oxidase, subunit I [Bacillus cereus G9241]
          Length = 647

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAQLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 645


>gi|228899385|ref|ZP_04063646.1| Quinol oxidase subunit 1 [Bacillus thuringiensis IBL 4222]
 gi|228860239|gb|EEN04638.1| Quinol oxidase subunit 1 [Bacillus thuringiensis IBL 4222]
          Length = 647

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDDGYYVSVDEIKETEH 645


>gi|218895755|ref|YP_002444166.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cereus G9842]
 gi|228906455|ref|ZP_04070336.1| Quinol oxidase subunit 1 [Bacillus thuringiensis IBL 200]
 gi|402562271|ref|YP_006604995.1| cytochrome aa3 quinol oxidase subunit I [Bacillus thuringiensis
           HD-771]
 gi|423363538|ref|ZP_17341035.1| quinol oxidase subunit 1 [Bacillus cereus VD022]
 gi|423564917|ref|ZP_17541193.1| quinol oxidase subunit 1 [Bacillus cereus MSX-A1]
 gi|434373746|ref|YP_006608390.1| cytochrome aa3 quinol oxidase subunit I [Bacillus thuringiensis
           HD-789]
 gi|218542715|gb|ACK95109.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus G9842]
 gi|228853182|gb|EEM97958.1| Quinol oxidase subunit 1 [Bacillus thuringiensis IBL 200]
 gi|401074880|gb|EJP83272.1| quinol oxidase subunit 1 [Bacillus cereus VD022]
 gi|401194931|gb|EJR01896.1| quinol oxidase subunit 1 [Bacillus cereus MSX-A1]
 gi|401790923|gb|AFQ16962.1| cytochrome aa3 quinol oxidase subunit I [Bacillus thuringiensis
           HD-771]
 gi|401872303|gb|AFQ24470.1| cytochrome aa3 quinol oxidase subunit I [Bacillus thuringiensis
           HD-789]
          Length = 644

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILACLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|423381332|ref|ZP_17358616.1| quinol oxidase subunit 1 [Bacillus cereus BAG1O-2]
 gi|423444818|ref|ZP_17421723.1| quinol oxidase subunit 1 [Bacillus cereus BAG4X2-1]
 gi|423450644|ref|ZP_17427522.1| quinol oxidase subunit 1 [Bacillus cereus BAG5O-1]
 gi|423461295|ref|ZP_17438092.1| quinol oxidase subunit 1 [Bacillus cereus BAG5X2-1]
 gi|423467451|ref|ZP_17444219.1| quinol oxidase subunit 1 [Bacillus cereus BAG6O-1]
 gi|423536851|ref|ZP_17513269.1| quinol oxidase subunit 1 [Bacillus cereus HuB2-9]
 gi|423542577|ref|ZP_17518966.1| quinol oxidase subunit 1 [Bacillus cereus HuB4-10]
 gi|423544115|ref|ZP_17520473.1| quinol oxidase subunit 1 [Bacillus cereus HuB5-5]
 gi|423620655|ref|ZP_17596465.1| quinol oxidase subunit 1 [Bacillus cereus VD115]
 gi|423626158|ref|ZP_17601935.1| quinol oxidase subunit 1 [Bacillus cereus VD148]
 gi|401125029|gb|EJQ32790.1| quinol oxidase subunit 1 [Bacillus cereus BAG5O-1]
 gi|401137203|gb|EJQ44786.1| quinol oxidase subunit 1 [Bacillus cereus BAG5X2-1]
 gi|401168073|gb|EJQ75340.1| quinol oxidase subunit 1 [Bacillus cereus HuB4-10]
 gi|401185278|gb|EJQ92374.1| quinol oxidase subunit 1 [Bacillus cereus HuB5-5]
 gi|401246595|gb|EJR52940.1| quinol oxidase subunit 1 [Bacillus cereus VD115]
 gi|401252712|gb|EJR58963.1| quinol oxidase subunit 1 [Bacillus cereus VD148]
 gi|401629593|gb|EJS47405.1| quinol oxidase subunit 1 [Bacillus cereus BAG1O-2]
 gi|402410340|gb|EJV42745.1| quinol oxidase subunit 1 [Bacillus cereus BAG4X2-1]
 gi|402413389|gb|EJV45732.1| quinol oxidase subunit 1 [Bacillus cereus BAG6O-1]
 gi|402460433|gb|EJV92154.1| quinol oxidase subunit 1 [Bacillus cereus HuB2-9]
          Length = 644

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDLKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|228942996|ref|ZP_04105501.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228977449|ref|ZP_04137843.1| Quinol oxidase subunit 1 [Bacillus thuringiensis Bt407]
 gi|228782273|gb|EEM30457.1| Quinol oxidase subunit 1 [Bacillus thuringiensis Bt407]
 gi|228816660|gb|EEM62780.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 647

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 603 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKETEH 645


>gi|229095351|ref|ZP_04226343.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-29]
 gi|229101462|ref|ZP_04232203.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-28]
 gi|229114301|ref|ZP_04243721.1| Quinol oxidase subunit 1 [Bacillus cereus Rock1-3]
 gi|407708663|ref|YP_006832248.1| hypothetical protein MC28_5427 [Bacillus thuringiensis MC28]
 gi|228669139|gb|EEL24561.1| Quinol oxidase subunit 1 [Bacillus cereus Rock1-3]
 gi|228681950|gb|EEL36086.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-28]
 gi|228688210|gb|EEL42096.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-29]
 gi|407386348|gb|AFU16849.1| Quinol oxidase subunit 1 [Bacillus thuringiensis MC28]
          Length = 647

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDLKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 603 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKETEH 645


>gi|391328261|ref|XP_003738608.1| PREDICTED: ubiquinol oxidase subunit 1-like, partial [Metaseiulus
           occidentalis]
          Length = 490

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/421 (67%), Positives = 347/421 (82%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRGF DAVMMR Q A+++  + GYLPP HY+QIFTAHG IMIFF+AM  + G++N +V
Sbjct: 68  MLFRGFADAVMMRSQLALAYKGNPGYLPPHHYDQIFTAHGTIMIFFMAMAFMVGLVNIVV 127

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPF+N+LSFW+T+  A+L+ +SLFIGEFA  GW+ YPPLS +  SPGVGV
Sbjct: 128 PLQIGARDVAFPFMNSLSFWLTTISAVLINVSLFIGEFAQCGWVIYPPLSELKFSPGVGV 187

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DYYIW++QI+G+ TLL+G+N   TI+KMRAPGMKLM MP+FTWT L T +L++A FPVLT
Sbjct: 188 DYYIWAVQISGVATLLTGVNFFTTIVKMRAPGMKLMQMPVFTWTVLITMVLVLATFPVLT 247

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L    LDRY G HFFTND GG+  +YV+LIW WGHPEVYILVLP FG+FSE+VSTFS 
Sbjct: 248 VALAELALDRYFGMHFFTNDGGGSAQLYVSLIWTWGHPEVYILVLPAFGVFSEIVSTFSR 307

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY  MVYATV I  LS IVW HHFFTMG+G NVNAFFG+ TMII++PTG KIFNWL
Sbjct: 308 KPLFGYRVMVYATVAIGFLSLIVWAHHFFTMGAGPNVNAFFGVATMIIAVPTGVKIFNWL 367

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+GRI F+  + W IGFM+ F IGGM GV+LA+PAA+F+LHNSLF+VAHFHNVIIGG
Sbjct: 368 FTMYKGRIHFDSTMYWVIGFMVIFSIGGMTGVMLAMPAADFILHNSLFVVAHFHNVIIGG 427

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V FG ++G+NYWFPK FG+K+   WGK +FWFW  GF+VAF+PLYI GF G+TRRM+H++
Sbjct: 428 VYFGYVAGMNYWFPKVFGFKMNQAWGKAAFWFWFFGFFVAFVPLYIAGFEGMTRRMNHYD 487

Query: 421 D 421
           +
Sbjct: 488 N 488


>gi|228919552|ref|ZP_04082916.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840195|gb|EEM85472.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 647

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK        ++  + I MP N+ + I+ S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAEEDIKPIHMPSNSGVPIIASGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 645


>gi|228975948|ref|ZP_04136469.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|384184765|ref|YP_005570661.1| cytochrome aa3 quinol oxidase polypeptide I [Bacillus thuringiensis
           serovar chinensis CT-43]
 gi|410673057|ref|YP_006925428.1| quinol oxidase subunit 1 [Bacillus thuringiensis Bt407]
 gi|423387849|ref|ZP_17365101.1| quinol oxidase subunit 1 [Bacillus cereus BAG1X1-2]
 gi|423531299|ref|ZP_17507744.1| quinol oxidase subunit 1 [Bacillus cereus HuB1-1]
 gi|452197066|ref|YP_007477147.1| AA3-600 quinol oxidase subunit I [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
 gi|228783784|gb|EEM31842.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|326938474|gb|AEA14370.1| cytochrome aa3 quinol oxidase polypeptide I [Bacillus thuringiensis
           serovar chinensis CT-43]
 gi|401627768|gb|EJS45627.1| quinol oxidase subunit 1 [Bacillus cereus BAG1X1-2]
 gi|402444182|gb|EJV76069.1| quinol oxidase subunit 1 [Bacillus cereus HuB1-1]
 gi|409172186|gb|AFV16491.1| quinol oxidase subunit 1 [Bacillus thuringiensis Bt407]
 gi|452102459|gb|AGF99398.1| AA3-600 quinol oxidase subunit I [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
          Length = 644

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILACLIYRSFDYDDGYYVSVDEIKETEH 642


>gi|423579029|ref|ZP_17555140.1| quinol oxidase subunit 1 [Bacillus cereus VD014]
 gi|423638676|ref|ZP_17614328.1| quinol oxidase subunit 1 [Bacillus cereus VD156]
 gi|401219420|gb|EJR26077.1| quinol oxidase subunit 1 [Bacillus cereus VD014]
 gi|401270428|gb|EJR76450.1| quinol oxidase subunit 1 [Bacillus cereus VD156]
          Length = 644

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK        ++  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAEEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 642


>gi|228963802|ref|ZP_04124942.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228795873|gb|EEM43341.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 588

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 9   MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 65

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 66  PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 125

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 126 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 185

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 186 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 245

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 246 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 305

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 306 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 365

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 366 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 425

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 426 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 483

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 484 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 543

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YY+S +EI   E 
Sbjct: 544 LVFSWFWLAAIGGIGILACLIYRSFDYDDGYYVSVDEIKETEH 586


>gi|228983901|ref|ZP_04144094.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775814|gb|EEM24187.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 647

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S+F  + GFA
Sbjct: 543 VQHYNFAQLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASLFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGVGILACLIYRSFDYDEGYYISVDEIKKSEH 645


>gi|167825086|ref|ZP_02456557.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 9]
          Length = 468

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 271/449 (60%), Positives = 353/449 (78%), Gaps = 3/449 (0%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT  L L  LDRY+G 
Sbjct: 1   MITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILTVALALLALDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
           VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWLFTMYRGRI F  P+
Sbjct: 121 VIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPV 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGGV+FG ++G +YWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           KAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+SPPPVYNFA IP++H
Sbjct: 301 VALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATASPPPVYNFAVIPIVH 360

Query: 493 QSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFI 551
             D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFALVWH+W L I SF+
Sbjct: 361 ALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFALVWHIWWLAIASFV 420

Query: 552 ITLIIVIYNTFNYKRNYYISSEEITCIEK 580
             + +V+  +      YYI+++ +  IE+
Sbjct: 421 GIVAMVVLYSAGENDGYYIAADTVREIEE 449


>gi|23099709|ref|NP_693175.1| cytochrome aa3 quinol oxidase subunit I [Oceanobacillus iheyensis
           HTE831]
 gi|22777939|dbj|BAC14210.1| cytochrome aa3 quinol oxidase subunit I [Oceanobacillus iheyensis
           HTE831]
          Length = 650

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/582 (51%), Positives = 404/582 (69%), Gaps = 6/582 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D VMMRLQ ++   S   +L  +HYN++FT HGV+MIFF+AM  + G++N+++
Sbjct: 68  MLFRGGADGVMMRLQTSVPDNS---FLDAQHYNEVFTTHGVVMIFFMAMAFIIGLMNYVI 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN LSFW+   GA+L  IS  +G     GW  Y PL+G   S  VGV
Sbjct: 125 PLQIGARDVAFPRLNALSFWLYFAGAMLFNISFVVGGSPDAGWTNYYPLAGPEFSEHVGV 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY W+LQI+GIGTL++GIN + TI+KMRAPGMKLM MP+FTW+AL TNI+IV AFPVLT
Sbjct: 185 NYYNWALQISGIGTLMTGINFVVTIMKMRAPGMKLMKMPMFTWSALITNIIIVFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + TLDR   T+FFT   GG  MM+ NL WIWGHPEVYIL+LP FGI+S+++STFS 
Sbjct: 245 IALLMGTLDRQFFTNFFTTSDGGMDMMWANLFWIWGHPEVYILILPAFGIYSQIISTFSQ 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           + L+GY SMV + V+I+LLS++VW+HHFFTMG GA  N+ F ITTM I++PTG KIFNWL
Sbjct: 305 RNLYGYKSMVASMVIISLLSFVVWVHHFFTMGQGALTNSIFSITTMAIAVPTGIKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            TM++G+IRF  P+L++I F+  F IGG+ GV+L++ +A++  HN++FLVAHFHNVII G
Sbjct: 365 LTMWKGKIRFTTPMLYSIAFIPLFTIGGVTGVMLSIASADYQYHNTMFLVAHFHNVIIPG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F +++G+ Y++PK FG+ L    GK +FW  +IGF ++F P+YI G  G  RRM  + 
Sbjct: 425 VVFAMIAGLIYYWPKMFGFLLNERIGKWAFWNIVIGFCLSFFPMYITGLDGQARRMYTYS 484

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLI-VSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           + S      + +FG   +A+  L FI+ +  + Y  RH   ++  DPWN R+LEW+T +P
Sbjct: 485 EASGFGPLNLLSFGG--VALLTLGFILLVYNIYYSFRHAPRNVGDDPWNARSLEWATHNP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            P YNFA  P +   +++W  KKN +K  K+   DI MP N+   I+++ F  I GF  V
Sbjct: 543 VPEYNFAVTPTVDSEEAFWDYKKNGYKLFKEPISDIHMPNNSGWSIILAGFFFIFGFFFV 602

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           +H+W   I+  I  L  ++Y TF     ++I  EEI   EKK
Sbjct: 603 FHVWAGVIVGAIGILGCLLYRTFEKDDGHHIHKEEIIETEKK 644


>gi|218234776|ref|YP_002365496.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cereus B4264]
 gi|296501452|ref|YP_003663152.1| cytochrome aa3 quinol oxidase polypeptide I [Bacillus thuringiensis
           BMB171]
 gi|423590463|ref|ZP_17566526.1| quinol oxidase subunit 1 [Bacillus cereus VD045]
 gi|423645873|ref|ZP_17621467.1| quinol oxidase subunit 1 [Bacillus cereus VD166]
 gi|423646764|ref|ZP_17622334.1| quinol oxidase subunit 1 [Bacillus cereus VD169]
 gi|218162733|gb|ACK62725.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus B4264]
 gi|296322504|gb|ADH05432.1| cytochrome aa3 quinol oxidase polypeptide I [Bacillus thuringiensis
           BMB171]
 gi|401220760|gb|EJR27390.1| quinol oxidase subunit 1 [Bacillus cereus VD045]
 gi|401266480|gb|EJR72556.1| quinol oxidase subunit 1 [Bacillus cereus VD166]
 gi|401287053|gb|EJR92862.1| quinol oxidase subunit 1 [Bacillus cereus VD169]
          Length = 644

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKTEH 642


>gi|49183693|ref|YP_026945.1| quinol oxidase subunit I [Bacillus anthracis str. Sterne]
 gi|49480264|ref|YP_034958.1| quinol oxidase subunit 1 (cytochrome c oxidase subunit I) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|52144609|ref|YP_082219.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus cereus E33L]
 gi|65318130|ref|ZP_00391089.1| COG0843: Heme/copper-type cytochrome/quinol oxidases, subunit 1
           [Bacillus anthracis str. A2012]
 gi|118476380|ref|YP_893531.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus thuringiensis str. Al Hakam]
 gi|228913390|ref|ZP_04077023.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228957120|ref|ZP_04118890.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229137499|ref|ZP_04266109.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-ST26]
 gi|229154402|ref|ZP_04282521.1| Quinol oxidase subunit 1 [Bacillus cereus ATCC 4342]
 gi|49177620|gb|AAT52996.1| quinol oxidase, subunit I [Bacillus anthracis str. Sterne]
 gi|49331820|gb|AAT62466.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|51978078|gb|AAU19628.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus cereus E33L]
 gi|118415605|gb|ABK84024.1| cytochrome aa3 quinol oxidase subunit 1 apoprotein [Bacillus
           thuringiensis str. Al Hakam]
 gi|228629050|gb|EEK85758.1| Quinol oxidase subunit 1 [Bacillus cereus ATCC 4342]
 gi|228645946|gb|EEL02170.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-ST26]
 gi|228802567|gb|EEM49414.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228846299|gb|EEM91318.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 647

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 645


>gi|196042067|ref|ZP_03109352.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus
           NVH0597-99]
 gi|218901896|ref|YP_002449730.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cereus AH820]
 gi|228925888|ref|ZP_04088972.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229120351|ref|ZP_04249601.1| Quinol oxidase subunit 1 [Bacillus cereus 95/8201]
 gi|229183034|ref|ZP_04310266.1| Quinol oxidase subunit 1 [Bacillus cereus BGSC 6E1]
 gi|196027092|gb|EDX65714.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus
           NVH0597-99]
 gi|218539147|gb|ACK91545.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus AH820]
 gi|228600491|gb|EEK58079.1| Quinol oxidase subunit 1 [Bacillus cereus BGSC 6E1]
 gi|228663161|gb|EEL18751.1| Quinol oxidase subunit 1 [Bacillus cereus 95/8201]
 gi|228833903|gb|EEM79456.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 644

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 401/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I++S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIMSGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWIAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 642


>gi|30260852|ref|NP_843229.1| quinol oxidase subunit I [Bacillus anthracis str. Ames]
 gi|47525983|ref|YP_017332.1| quinol oxidase subunit I [Bacillus anthracis str. 'Ames Ancestor']
 gi|165872919|ref|ZP_02217543.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0488]
 gi|167635170|ref|ZP_02393486.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0442]
 gi|170689429|ref|ZP_02880620.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0465]
 gi|170709003|ref|ZP_02899434.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0389]
 gi|190568587|ref|ZP_03021493.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           Tsiankovskii-I]
 gi|196035689|ref|ZP_03103092.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus W]
 gi|196047066|ref|ZP_03114284.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus 03BB108]
 gi|206977801|ref|ZP_03238691.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus H3081.97]
 gi|217958286|ref|YP_002336832.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cereus AH187]
 gi|222094457|ref|YP_002528516.1| quinol oxidase, subunit 1 (cytochrome C oxidase, subunit i)
           [Bacillus cereus Q1]
 gi|225862680|ref|YP_002748058.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus 03BB102]
 gi|227816427|ref|YP_002816436.1| cytochrome aa3 quinol oxidase subunit I [Bacillus anthracis str.
           CDC 684]
 gi|229195025|ref|ZP_04321802.1| Quinol oxidase subunit 1 [Bacillus cereus m1293]
 gi|229602525|ref|YP_002865297.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0248]
 gi|254684221|ref|ZP_05148081.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus anthracis str. CNEVA-9066]
 gi|254725883|ref|ZP_05187665.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus anthracis str. A1055]
 gi|254742103|ref|ZP_05199790.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus anthracis str. Kruger B]
 gi|254755775|ref|ZP_05207808.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus anthracis str. Vollum]
 gi|254762359|ref|ZP_05214203.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus anthracis str. Australia 94]
 gi|301052351|ref|YP_003790562.1| quinol oxidase subunit I [Bacillus cereus biovar anthracis str. CI]
 gi|375282774|ref|YP_005103211.1| quinol oxidase subunit I [Bacillus cereus NC7401]
 gi|376264666|ref|YP_005117378.1| Quinol oxidase subunit I [Bacillus cereus F837/76]
 gi|384178659|ref|YP_005564421.1| cytochrome aa3 quinol oxidase subunit I [Bacillus thuringiensis
           serovar finitimus YBT-020]
 gi|421507663|ref|ZP_15954582.1| cytochrome aa3 quinol oxidase subunit I [Bacillus anthracis str.
           UR-1]
 gi|421639498|ref|ZP_16080090.1| cytochrome aa3 quinol oxidase subunit I [Bacillus anthracis str.
           BF1]
 gi|423356881|ref|ZP_17334482.1| quinol oxidase subunit 1 [Bacillus cereus IS075]
 gi|423375979|ref|ZP_17353311.1| quinol oxidase subunit 1 [Bacillus cereus AND1407]
 gi|423553448|ref|ZP_17529775.1| quinol oxidase subunit 1 [Bacillus cereus ISP3191]
 gi|423570256|ref|ZP_17546502.1| quinol oxidase subunit 1 [Bacillus cereus MSX-A12]
 gi|423577452|ref|ZP_17553571.1| quinol oxidase subunit 1 [Bacillus cereus MSX-D12]
 gi|423607474|ref|ZP_17583367.1| quinol oxidase subunit 1 [Bacillus cereus VD102]
 gi|423630384|ref|ZP_17606132.1| quinol oxidase subunit 1 [Bacillus cereus VD154]
 gi|423653578|ref|ZP_17628877.1| quinol oxidase subunit 1 [Bacillus cereus VD200]
 gi|30254301|gb|AAP24715.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           Ames]
 gi|47501131|gb|AAT29807.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           'Ames Ancestor']
 gi|164711332|gb|EDR16885.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0488]
 gi|167529429|gb|EDR92180.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0442]
 gi|170126105|gb|EDS95001.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0389]
 gi|170666591|gb|EDT17363.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0465]
 gi|190560381|gb|EDV14360.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           Tsiankovskii-I]
 gi|195991656|gb|EDX55621.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus W]
 gi|196022047|gb|EDX60736.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus 03BB108]
 gi|206743998|gb|EDZ55415.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus H3081.97]
 gi|217066183|gb|ACJ80433.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus AH187]
 gi|221238514|gb|ACM11224.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus cereus Q1]
 gi|225786721|gb|ACO26938.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus 03BB102]
 gi|227007771|gb|ACP17514.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           CDC 684]
 gi|228588460|gb|EEK46501.1| Quinol oxidase subunit 1 [Bacillus cereus m1293]
 gi|229266933|gb|ACQ48570.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0248]
 gi|300374520|gb|ADK03424.1| quinol oxidase, subunit I [Bacillus cereus biovar anthracis str.
           CI]
 gi|324324743|gb|ADY20003.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus thuringiensis
           serovar finitimus YBT-020]
 gi|358351299|dbj|BAL16471.1| quinol oxidase, subunit I [Bacillus cereus NC7401]
 gi|364510466|gb|AEW53865.1| Quinol oxidase subunit I [Bacillus cereus F837/76]
 gi|401076639|gb|EJP84991.1| quinol oxidase subunit 1 [Bacillus cereus IS075]
 gi|401089664|gb|EJP97829.1| quinol oxidase subunit 1 [Bacillus cereus AND1407]
 gi|401183843|gb|EJQ90953.1| quinol oxidase subunit 1 [Bacillus cereus ISP3191]
 gi|401204159|gb|EJR10978.1| quinol oxidase subunit 1 [Bacillus cereus MSX-A12]
 gi|401204784|gb|EJR11596.1| quinol oxidase subunit 1 [Bacillus cereus MSX-D12]
 gi|401240268|gb|EJR46671.1| quinol oxidase subunit 1 [Bacillus cereus VD102]
 gi|401264917|gb|EJR71013.1| quinol oxidase subunit 1 [Bacillus cereus VD154]
 gi|401300599|gb|EJS06190.1| quinol oxidase subunit 1 [Bacillus cereus VD200]
 gi|401822423|gb|EJT21574.1| cytochrome aa3 quinol oxidase subunit I [Bacillus anthracis str.
           UR-1]
 gi|403393509|gb|EJY90753.1| cytochrome aa3 quinol oxidase subunit I [Bacillus anthracis str.
           BF1]
          Length = 644

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 642


>gi|229042563|ref|ZP_04190306.1| Quinol oxidase subunit 1 [Bacillus cereus AH676]
 gi|229108309|ref|ZP_04237928.1| Quinol oxidase subunit 1 [Bacillus cereus Rock1-15]
 gi|229126128|ref|ZP_04255149.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-Cer4]
 gi|229143426|ref|ZP_04271855.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-ST24]
 gi|229149040|ref|ZP_04277284.1| Quinol oxidase subunit 1 [Bacillus cereus m1550]
 gi|228634422|gb|EEK91007.1| Quinol oxidase subunit 1 [Bacillus cereus m1550]
 gi|228640054|gb|EEK96455.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-ST24]
 gi|228657335|gb|EEL13152.1| Quinol oxidase subunit 1 [Bacillus cereus BDRD-Cer4]
 gi|228675146|gb|EEL30371.1| Quinol oxidase subunit 1 [Bacillus cereus Rock1-15]
 gi|228726782|gb|EEL77996.1| Quinol oxidase subunit 1 [Bacillus cereus AH676]
          Length = 647

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKTEH 645


>gi|228932131|ref|ZP_04095022.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228944452|ref|ZP_04106825.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228815354|gb|EEM61602.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228827559|gb|EEM73302.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 647

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 645


>gi|228951200|ref|ZP_04113315.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229078013|ref|ZP_04210622.1| Quinol oxidase subunit 1 [Bacillus cereus Rock4-2]
 gi|229177230|ref|ZP_04304617.1| Quinol oxidase subunit 1 [Bacillus cereus 172560W]
 gi|228606236|gb|EEK63670.1| Quinol oxidase subunit 1 [Bacillus cereus 172560W]
 gi|228705351|gb|EEL57728.1| Quinol oxidase subunit 1 [Bacillus cereus Rock4-2]
 gi|228808497|gb|EEM55001.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 647

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWLAAIGGVGILACLIYRSFDYDEGYYISVDEIKKTEH 645


>gi|206968027|ref|ZP_03228983.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus AH1134]
 gi|229068386|ref|ZP_04201689.1| Quinol oxidase subunit 1 [Bacillus cereus F65185]
 gi|229188908|ref|ZP_04315941.1| Quinol oxidase subunit 1 [Bacillus cereus ATCC 10876]
 gi|365163741|ref|ZP_09359844.1| quinol oxidase subunit 1 [Bacillus sp. 7_6_55CFAA_CT2]
 gi|423415480|ref|ZP_17392600.1| quinol oxidase subunit 1 [Bacillus cereus BAG3O-2]
 gi|423422868|ref|ZP_17399899.1| quinol oxidase subunit 1 [Bacillus cereus BAG3X2-2]
 gi|423428728|ref|ZP_17405732.1| quinol oxidase subunit 1 [Bacillus cereus BAG4O-1]
 gi|423434310|ref|ZP_17411291.1| quinol oxidase subunit 1 [Bacillus cereus BAG4X12-1]
 gi|423505684|ref|ZP_17482275.1| quinol oxidase subunit 1 [Bacillus cereus HD73]
 gi|449087496|ref|YP_007419937.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar kurstaki
           str. HD73]
 gi|206736947|gb|EDZ54094.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus cereus AH1134]
 gi|228594613|gb|EEK52399.1| Quinol oxidase subunit 1 [Bacillus cereus ATCC 10876]
 gi|228714847|gb|EEL66719.1| Quinol oxidase subunit 1 [Bacillus cereus F65185]
 gi|363614928|gb|EHL66401.1| quinol oxidase subunit 1 [Bacillus sp. 7_6_55CFAA_CT2]
 gi|401095645|gb|EJQ03700.1| quinol oxidase subunit 1 [Bacillus cereus BAG3O-2]
 gi|401118545|gb|EJQ26376.1| quinol oxidase subunit 1 [Bacillus cereus BAG3X2-2]
 gi|401124474|gb|EJQ32238.1| quinol oxidase subunit 1 [Bacillus cereus BAG4O-1]
 gi|401127037|gb|EJQ34768.1| quinol oxidase subunit 1 [Bacillus cereus BAG4X12-1]
 gi|402451326|gb|EJV83147.1| quinol oxidase subunit 1 [Bacillus cereus HD73]
 gi|449021253|gb|AGE76416.1| Quinol oxidase subunit 1 [Bacillus thuringiensis serovar kurstaki
           str. HD73]
          Length = 644

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATHSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  +  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGVGILACLIYRSFDYDEGYYISVDEIKKTEH 642


>gi|167720489|ref|ZP_02403725.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei DM98]
          Length = 468

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/449 (60%), Positives = 352/449 (78%), Gaps = 3/449 (0%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT  L L  LDRY+G 
Sbjct: 1   MITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILTVALALLALDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
           VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWLFTMYRGRI F  P+
Sbjct: 121 VIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPV 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGGV+FG ++G +YWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           KAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+SPPPVYNFA IP +H
Sbjct: 301 VALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATASPPPVYNFAVIPTVH 360

Query: 493 QSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFI 551
             D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFALVWH+W L I SF+
Sbjct: 361 ALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFALVWHIWWLAITSFV 420

Query: 552 ITLIIVIYNTFNYKRNYYISSEEITCIEK 580
             + +V+  +      YYI+++ +  IE+
Sbjct: 421 GIVAMVVLYSAGENDGYYIAADTVREIEE 449


>gi|167911807|ref|ZP_02498898.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 112]
          Length = 467

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/448 (60%), Positives = 352/448 (78%), Gaps = 3/448 (0%)

Query: 136 LSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTH 195
           ++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT  L L  LDRY+G H
Sbjct: 1   ITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILTVALALLALDRYLGMH 60

Query: 196 FFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVV 255
           FFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS K LFGY +MVYA+ V
Sbjct: 61  FFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSKKPLFGYKTMVYASCV 120

Query: 256 ITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPIL 315
           I +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWLFTMYRGRI F  P+L
Sbjct: 121 IMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPVL 180

Query: 316 WTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPK 375
           WTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGGV+FG ++G +YWFPK
Sbjct: 181 WTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFPK 240

Query: 376 AFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGT 435
           AFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H+++ +   W  +AA G 
Sbjct: 241 AFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGV 300

Query: 436 LLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQ 493
            LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+SPPPVYNFA IP++H 
Sbjct: 301 ALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATASPPPVYNFAVIPIVHA 360

Query: 494 SDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFII 552
            D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFALVWH+W L I SF+ 
Sbjct: 361 LDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFALVWHIWWLAIASFVG 420

Query: 553 TLIIVIYNTFNYKRNYYISSEEITCIEK 580
            + +V+  +      YYI+++ +  IE+
Sbjct: 421 IVAMVVLYSAGENDGYYIAADTVREIEE 448


>gi|126730197|ref|ZP_01746009.1| oxidase [Sagittula stellata E-37]
 gi|126709577|gb|EBA08631.1| oxidase [Sagittula stellata E-37]
          Length = 692

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 283/587 (48%), Positives = 394/587 (67%), Gaps = 4/587 (0%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M  RG  + V+MR Q   S+    GYL P+H++++F+ HG IMIFFV MP + G +N +V
Sbjct: 81  MFARGVAEGVVMRSQYVTSYQG--GYLTPDHFSELFSTHGTIMIFFVLMPFLIGFMNLLV 138

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN +S   T  GA+L+MISL +G+FA+ GW GYPP +G+A  PG G 
Sbjct: 139 PLQIGARDVAFPRLNQISLGFTIVGAMLLMISLVVGQFATGGWTGYPPYTGVAFQPGTGP 198

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           DY+IWSL ++GIG+LL+GIN   TI KMR PGM  M MPIF WTALCT+IL+V A P LT
Sbjct: 199 DYWIWSLGLSGIGSLLTGINFAVTIYKMRCPGMTFMRMPIFVWTALCTSILLVFALPPLT 258

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
           +V+ +  LDRY+  HFFTNDLGGN+M + NL W++GHPEVYIL+LP FG++SE  + FS 
Sbjct: 259 AVVIMQALDRYLDFHFFTNDLGGNMMNFANLFWMFGHPEVYILILPAFGLYSEFTAIFSG 318

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR++GY S+V AT+ I +LS+ VWLHHFFTMG    +N  FG+ TM+I+IPTG K++ W+
Sbjct: 319 KRIYGYMSLVIATMAIAVLSFTVWLHHFFTMGQSPTINVAFGVATMLIAIPTGVKVYVWI 378

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T++ GRIR   PI++  GF+  F +GG  G++LA P  NF +HNS F+VAHFHNV++ G
Sbjct: 379 ATLWGGRIRMRTPIIYLAGFIFFFAVGGYTGILLANPTINFTVHNSQFVVAHFHNVLLPG 438

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            LF +++GI  WFPK FG++L+  W   + W +++GF  AFMPLY++G MG+ RR   F+
Sbjct: 439 TLFAVLAGIYVWFPKFFGFRLDERWSATTAWLFIVGFTFAFMPLYVVGLMGMPRRSPAFD 498

Query: 421 DISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPP 480
           D S   +  +   G L +   + + I   +VS ++R  L    GDPW+GRTLEW+T +P 
Sbjct: 499 DPSYIPYMIVTMGGALCVLAALGALIGTFVVSAKRREALAVPGGDPWDGRTLEWATPAPV 558

Query: 481 PVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
           P +NFAFIP +H  D++   K     +    + ++DI +   + IG+ I +F   +GFA+
Sbjct: 559 PEWNFAFIPEVHSQDAFAVEKSKGTVYDIEANSYEDIELAPTSWIGLTIIVFGTALGFAM 618

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           V+ MW L I+S +  LI  I   F   +   I ++ I   E+  I +
Sbjct: 619 VFWMWWLAILSGLALLIHAIGLGFVRDKGEIIPADVIERTERDWIAM 665


>gi|229089763|ref|ZP_04221023.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-42]
 gi|228693571|gb|EEL47274.1| Quinol oxidase subunit 1 [Bacillus cereus Rock3-42]
          Length = 647

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/583 (51%), Positives = 402/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 68  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 124

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 125 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 184

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 185 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 244

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 245 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 304

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 305 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 364

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 365 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 424

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 425 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 484

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 485 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 542

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++W+MKK         ++ + I MP N+ + I++S F  + GFA
Sbjct: 543 VQHYNFAKLPEIKEADAFWFMKKRGETVTPAAEELKPIHMPSNSGVPIIMSGFFGLAGFA 602

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + +  I  +  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 603 LVFSWFWIAAIGGVGILACLIYRSFDYDEGYYISVDEIKKTEH 645


>gi|417516413|ref|ZP_12179321.1| Cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Uganda str. R8-3404]
 gi|353654344|gb|EHC95642.1| Cytochrome O ubiquinol oxidase subunit I [Salmonella enterica
           subsp. enterica serovar Uganda str. R8-3404]
          Length = 484

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 276/471 (58%), Positives = 358/471 (76%), Gaps = 15/471 (3%)

Query: 127 LQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLS 186
           +Q++GIGT L+GIN   TI+KMRAPGM +  MP+FTW +LC N+LI+A+FP+LT  + L 
Sbjct: 1   MQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALL 60

Query: 187 TLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGY 246
           TLDRY+GTHFFTND+GGN+MMY+NLIW WGHPEVYIL+LPVFG+FSE+ +TFS KRLFGY
Sbjct: 61  TLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGY 120

Query: 247 SSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRG 306
           +S+V+ATV IT+LS+IVWLHHFFTMG+GANVNAFFGITTMII+IPTG KIFNWLFTMY+G
Sbjct: 121 TSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQG 180

Query: 307 RIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLM 366
           RI F   ++WTIGF++TF +GGM GV+LAVP A+F+LHNSLFL+AHFHNVIIGGV+FG  
Sbjct: 181 RIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCF 240

Query: 367 SGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQI 426
           +G+ YW+PKAFG+KL   WGK +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   D     
Sbjct: 241 AGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHT 300

Query: 427 WFQIAAFGTLLIAMGILSF--------------IIQLIVSYRKRHTLIDITGDPWNGRTL 472
              +AA G    A  I                 +IQ+ VS R R    D+TGDPW GRTL
Sbjct: 301 MLMVAAAGAAAGAALIAPAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTL 360

Query: 473 EWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIFS 531
           EWSTSSPPP YNFA +P +H+ D++W MK+    + +  ++++I MPKN+  GI+I+ F+
Sbjct: 361 EWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFA 420

Query: 532 LIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
            + GFA++WH+W L I+ F   +I  I  +F+   +YY+   E+  +E + 
Sbjct: 421 TVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQH 471


>gi|42779849|ref|NP_977096.1| quinol oxidase subunit I [Bacillus cereus ATCC 10987]
 gi|402553767|ref|YP_006595038.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cereus FRI-35]
 gi|42735766|gb|AAS39704.1| quinol oxidase, subunit I [Bacillus cereus ATCC 10987]
 gi|401794977|gb|AFQ08836.1| cytochrome aa3 quinol oxidase subunit I [Bacillus cereus FRI-35]
          Length = 644

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 400/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G +     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFVLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILACLIYRSFDYDEGYYISVDEIKKSEH 642


>gi|167816682|ref|ZP_02448362.1| ubiquinol oxidase polypeptide I [Burkholderia pseudomallei 91]
          Length = 468

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/449 (60%), Positives = 352/449 (78%), Gaps = 3/449 (0%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT  L L  LDRY+G 
Sbjct: 1   MITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILTVALALLALDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
           VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWLFTMYRGRI F  P+
Sbjct: 121 VIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPV 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGGV+FG ++G +YWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           KAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+SPPPVYNFA IP +H
Sbjct: 301 VALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATASPPPVYNFAVIPTVH 360

Query: 493 QSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFI 551
             D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFALVWH+W L I +F+
Sbjct: 361 ALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFALVWHIWWLAITAFV 420

Query: 552 ITLIIVIYNTFNYKRNYYISSEEITCIEK 580
             + +V+  +      YYI+++ +  IE+
Sbjct: 421 GIVAMVVLYSAGENDGYYIAADTVREIEE 449


>gi|167641837|ref|ZP_02400077.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0193]
 gi|177652787|ref|ZP_02935160.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0174]
 gi|254734417|ref|ZP_05192130.1| quinol oxidase, subunit 1 (cytochrome c oxidase, subunit I)
           [Bacillus anthracis str. Western North America USA6153]
 gi|167510185|gb|EDR85591.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0193]
 gi|172081821|gb|EDT66890.1| cytochrome aa3 quinol oxidase, subunit I [Bacillus anthracis str.
           A0174]
          Length = 644

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/584 (51%), Positives = 401/584 (68%), Gaps = 10/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWH-MWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+   WL  I  F I L  +IY +F+Y   YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGFGI-LACLIYRSFDYDEGYYISVDEIKKSEH 642


>gi|167744573|ref|ZP_02417347.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 14]
 gi|167895175|ref|ZP_02482577.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei 7894]
          Length = 468

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/449 (60%), Positives = 351/449 (78%), Gaps = 3/449 (0%)

Query: 135 LLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGT 194
           +++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT  L L  LDRY+G 
Sbjct: 1   MITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILTVALALLALDRYLGM 60

Query: 195 HFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATV 254
           HFFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS K LFGY +MVYA+ 
Sbjct: 61  HFFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSKKPLFGYKTMVYASC 120

Query: 255 VITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPI 314
           VI +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWLFTMYRGRI F  P+
Sbjct: 121 VIMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPV 180

Query: 315 LWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFP 374
           LWTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGGV+FG ++G +YWFP
Sbjct: 181 LWTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFP 240

Query: 375 KAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFG 434
           KAFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H+++ +   W  +AA G
Sbjct: 241 KAFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACG 300

Query: 435 TLLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIH 492
             LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+SPPPVYNFA IP +H
Sbjct: 301 VALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATASPPPVYNFAVIPTVH 360

Query: 493 QSDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFI 551
             D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFALVWH+W L I +F+
Sbjct: 361 ALDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFALVWHIWWLAIAAFV 420

Query: 552 ITLIIVIYNTFNYKRNYYISSEEITCIEK 580
             +  V+  +      YYI+++ +  IE+
Sbjct: 421 GIVATVVLYSAGENDGYYIAADTVREIEE 449


>gi|312112706|ref|YP_003991022.1| cytochrome C oxidase subunit I [Geobacillus sp. Y4.1MC1]
 gi|311217807|gb|ADP76411.1| cytochrome c oxidase, subunit I [Geobacillus sp. Y4.1MC1]
          Length = 648

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 297/583 (50%), Positives = 399/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q  +    +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLTVP---NMKFLDAQHYNEIFTTHGTIMILFMAMPFLIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+    SPGVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGALLFNISFVIGGSPDAGWTAYFPLASNEFSPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T++LI+ AFPV T
Sbjct: 182 NYYAVALQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTVLITSVLIIFAFPVFT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GT FF+   GG  M++ NL WIWGHPEVYI++LP FGIFSE+VSTF+ 
Sbjct: 242 VALALMTFDRLFGTQFFSMANGGMSMLWANLFWIWGHPEVYIVILPSFGIFSEIVSTFAR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV + V I  LS+IVW+HHFFTMG+G  VN+FF ITTM I+IPTG K+FNWL
Sbjct: 302 KRLFGYKAMVGSIVGIAFLSFIVWVHHFFTMGAGPAVNSFFSITTMAIAIPTGVKVFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IR    +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLRKGKIRLTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +GI+YW+PK FG+ L    GK +FW ++IGF + F P+Y LG MG+TRRM ++ 
Sbjct: 422 TVFACFAGIHYWYPKMFGHLLNEHLGKWAFWLFMIGFNICFFPMYFLGLMGMTRRMYTYA 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             +       +A  G +L+ +G + F     + Y  R+   D+TGDPW+GRTLEW+T+SP
Sbjct: 482 AGLGWTPLNVVATIGAVLMGIGFIVFCYN--IYYSARYGERDMTGDPWDGRTLEWATASP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P  YNF  +P +   D++W MKKN   ++  +++ + I MP N+    LISI     GF 
Sbjct: 540 PAHYNFPVVPEVTDLDAYWAMKKNGSGYEVKEEQLEPIHMPSNSGRPFLISIAFFFAGFG 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L II+ I  ++ +I  +F+    YYIS +EI   E+
Sbjct: 600 LVFKWFTLAIIAAIFIILGLILRSFDDDDGYYISVDEIKRTER 642


>gi|386734546|ref|YP_006207727.1| Quinol oxidase, subunit 1 [Bacillus anthracis str. H9401]
 gi|384384398|gb|AFH82059.1| Quinol oxidase, subunit 1 [Bacillus anthracis str. H9401]
          Length = 644

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/583 (51%), Positives = 399/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  D +M+R Q  ++F  +  YL  EHYN IFT HG +MI F+AMP V G++N +V
Sbjct: 65  MLFRGGMDGLMIRAQ--LTFPET-TYLNAEHYNGIFTTHGTVMILFMAMPFVMGLMNLVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVA+PFLN LSFW+   GA+L  I+  IG     GW  Y P++G   + GVG 
Sbjct: 122 PLQIGARDVAYPFLNALSFWLFFVGAMLFNIAFVIGGSPDAGWTSYFPMAGTEFTSGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+G+GTL++GIN + TI+KMR PGM LM MP+FTW+ L T I+I+ AFPVLT
Sbjct: 182 NYYAIALQISGLGTLMTGINFLVTILKMRTPGMTLMRMPMFTWSILITTIIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR    HFFT   GG  M++ NL W+WGHPEVYI++LP FGIFSE++STFS 
Sbjct: 242 VALALMTFDRLFDAHFFTMASGGMPMLWANLFWVWGHPEVYIVILPAFGIFSEIISTFSR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGYS+MVY+ V I+LLS++VWLHHFFTMG+G  VN+FF I+TM ISIPTG KIFNWL
Sbjct: 302 KRLFGYSAMVYSMVAISLLSFVVWLHHFFTMGAGPAVNSFFSISTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+Y+GRIRF VP+LW++ F+  FV+GG+ GV+L + AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLYKGRIRFTVPMLWSLAFIPNFVVGGVTGVMLGMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F +++G  +W+PK  G+ L    GK +FW ++ GF + F P+Y LG  G+TRRM  + 
Sbjct: 422 TVFAMLAGFTFWYPKMTGHMLNERLGKWTFWIFMSGFNICFFPMYFLGLDGMTRRMYTYS 481

Query: 421 DISLQIWF-QIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +     W  QIA+ G +++ +G L     +I  +  RH   D TGDPW+GRTLEW+T SP
Sbjct: 482 ESLGWGWLNQIASVGAVMMGIGFLLLCYNVI--WSARHGERDTTGDPWDGRTLEWATQSP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKF--PKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA +P I ++D++WYMKK         +  + I MP N+ + I+ S F  + GFA
Sbjct: 540 VQHYNFAKLPEIKEADAFWYMKKRGETVTPAAEDIKPIHMPSNSGVPIIASGFFGLAGFA 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L  I  I  L  +IY +F+    YYIS +EI   E 
Sbjct: 600 LVFSWFWLAAIGGIGILACLIYRSFDCDEGYYISVDEIKKSEH 642


>gi|336237168|ref|YP_004589784.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|423721663|ref|ZP_17695845.1| cytochrome aa3 quinol oxidase, subunit I [Geobacillus
           thermoglucosidans TNO-09.020]
 gi|335364023|gb|AEH49703.1| cytochrome aa3 quinol oxidase, subunit I [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|383365466|gb|EID42762.1| cytochrome aa3 quinol oxidase, subunit I [Geobacillus
           thermoglucosidans TNO-09.020]
          Length = 648

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 296/583 (50%), Positives = 399/583 (68%), Gaps = 8/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q  +    +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLTVP---NMKFLDAQHYNEIFTTHGTIMILFMAMPFLIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+    SPGVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGALLFNISFVIGGSPDAGWTAYFPLASNEFSPGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T++LI+ AFPV T
Sbjct: 182 NYYAVALQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTVLITSVLIIFAFPVFT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GT FF+   GG  M++ NL WIWGHPEVYI++LP FGIFSE+VSTF+ 
Sbjct: 242 VALALMTFDRLFGTQFFSMANGGMSMLWANLFWIWGHPEVYIVILPSFGIFSEIVSTFAR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV + V I  LS+IVW+HHFFTMG+G  VN+FF ITTM I+IPTG K+FNWL
Sbjct: 302 KRLFGYKAMVGSIVGIAFLSFIVWVHHFFTMGAGPAVNSFFSITTMAIAIPTGVKVFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IR    +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLRKGKIRLTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +G++YW+PK FG+ L    GK +FW ++IGF + F P+Y LG MG+TRRM ++ 
Sbjct: 422 TVFACFAGVHYWYPKMFGHLLNEHLGKWAFWLFMIGFNICFFPMYFLGLMGMTRRMYTYA 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             +       +A  G +L+ +G + F     + Y  R+   D+TGDPW+GRTLEW+T+SP
Sbjct: 482 AGLGWTPLNVVATIGAVLMGIGFIVFCYN--IYYSARYGERDMTGDPWDGRTLEWATASP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P  YNF  +P +   D++W MKKN   ++  +++ + I MP N+    LISI     GF 
Sbjct: 540 PAHYNFPVVPEVTDLDAYWAMKKNGSGYEVKEEQLEPIHMPSNSGRPFLISIAFFFAGFG 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEK 580
           LV+  + L II+ I  ++ +I  +F+    YYIS +EI   E+
Sbjct: 600 LVFKWFTLAIIAAIFIILGLILRSFDDDDGYYISVDEIKRTER 642


>gi|167846589|ref|ZP_02472097.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei B7210]
 gi|167919809|ref|ZP_02506900.1| ubiquinol oxidase, subunit I [Burkholderia pseudomallei BCC215]
          Length = 467

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/448 (60%), Positives = 350/448 (78%), Gaps = 3/448 (0%)

Query: 136 LSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTH 195
           ++ IN   TII+MRAPGM LM MP+FTWTALC+N+LI+A FP+LT  L L  LDRY+G H
Sbjct: 1   ITAINFFVTIIRMRAPGMTLMKMPVFTWTALCSNVLIMATFPILTVALALLALDRYLGMH 60

Query: 196 FFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVV 255
           FFTND GGN M+Y+NLIW WGHPEVYILVLP FGI+SEV++TFS K LFGY +MVYA+ V
Sbjct: 61  FFTNDAGGNAMVYLNLIWAWGHPEVYILVLPAFGIYSEVIATFSKKPLFGYKTMVYASCV 120

Query: 256 ITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPIL 315
           I +L+++VWLHHFFTMGSGANVNAFFGI TM+I+IPTG KIFNWLFTMYRGRI F  P+L
Sbjct: 121 IMVLAFLVWLHHFFTMGSGANVNAFFGIMTMVIAIPTGVKIFNWLFTMYRGRIEFTAPVL 180

Query: 316 WTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPK 375
           WTIGFM+TF +GGM GV++A+P A+F+LHNSLFL+AHFHN IIGGV+FG ++G +YWFPK
Sbjct: 181 WTIGFMVTFTLGGMTGVMMAIPGADFVLHNSLFLIAHFHNAIIGGVVFGYLAGFHYWFPK 240

Query: 376 AFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGT 435
           AFG+KL+   GK +FW W IGFYV+F+PLY+LGFMG+TRR++H+++ +   W  +AA G 
Sbjct: 241 AFGFKLDEKLGKRAFWCWFIGFYVSFVPLYVLGFMGMTRRLNHYDNPAWHPWLIVAACGV 300

Query: 436 LLIAMGILSFIIQLIVSYRKRHT--LIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQ 493
            LIA+G+L  + Q+ V+ R R+     D TGDPW+GRTLEW+T+SPPPVYNFA IP +H 
Sbjct: 301 ALIALGVLHQVAQVWVAVRNRNAPGYRDTTGDPWDGRTLEWATASPPPVYNFAVIPTVHA 360

Query: 494 SDSWWYMKKNNFKFPKDK-FQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFII 552
            D   Y K++     K+  +QDI MP NT+ G+ + +FSL++GFALVWH+W L I +F+ 
Sbjct: 361 LDELAYRKEHGIGVGKNAVYQDIHMPSNTSAGLFVGMFSLVLGFALVWHIWWLAIAAFVG 420

Query: 553 TLIIVIYNTFNYKRNYYISSEEITCIEK 580
            +  V+  +      YYI+++ +  IE+
Sbjct: 421 IVATVVLYSAGENDGYYIAADTVREIEE 448


>gi|420655404|ref|ZP_15142330.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-34]
 gi|391520819|gb|EIR73340.1| ubiquinol oxidase subunit 1 [Yersinia pestis PY-34]
          Length = 449

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/434 (62%), Positives = 340/434 (78%), Gaps = 1/434 (0%)

Query: 148 MRAPGMKLMNMPIFTWTALCTNILIVAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMM 207
           MRAPGM +M MP+FTW A CTNILI+ +FP+LT  + L TLDRY+GTHFFTND+GGN+MM
Sbjct: 1   MRAPGMSMMKMPVFTWAAFCTNILIIVSFPILTVTVALLTLDRYLGTHFFTNDMGGNMMM 60

Query: 208 YVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHH 267
           Y+NLIW WGHPEVYILVLPVFG+FSEV +TFS KRLFGY+S+V+AT+ IT+LS+IVWLHH
Sbjct: 61  YINLIWAWGHPEVYILVLPVFGVFSEVTATFSRKRLFGYTSLVWATIAITVLSFIVWLHH 120

Query: 268 FFTMGSGANVNAFFGITTMIISIPTGAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIG 327
           FFTMGSGANVNAFFGI TMIISIPTG KIFNWLFTMY+GRI+    +LWTIGF++TF IG
Sbjct: 121 FFTMGSGANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIQINSAMLWTIGFIVTFSIG 180

Query: 328 GMAGVILAVPAANFLLHNSLFLVAHFHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGK 387
           GM GV+LAVP ANF+LHNSLFL+AHFHNVIIGGV+FG  +G+ YW+PK+FG+ L   WG 
Sbjct: 181 GMTGVLLAVPGANFVLHNSLFLIAHFHNVIIGGVVFGCFAGLTYWWPKSFGFMLNEKWGI 240

Query: 388 CSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFII 447
            +FWFW+IGF+VAFMPLY+LGFMG+TRR+S   +        +AA G  LIA GIL  +I
Sbjct: 241 RAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQDINPEFHTMLMVAAGGAALIACGILCQVI 300

Query: 448 QLIVSYRKRHTLIDITGDPWNGRTLEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKF 507
           Q+ VS R R    D+TGDPW  RTLEWSTSSPPP YNFA +P +   D +W MK+    +
Sbjct: 301 QVFVSIRDREQNRDLTGDPWGARTLEWSTSSPPPFYNFAVVPNVVDRDEFWDMKEKGEAY 360

Query: 508 PK-DKFQDILMPKNTNIGILISIFSLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKR 566
            +  K+++I MPKNT  G++I+ FSLI GFA+VW++W L II F+  ++  I  +F+   
Sbjct: 361 KRPAKYEEIHMPKNTGAGVIIAGFSLIFGFAMVWYIWWLAIIGFVGMIVTWIVKSFDEDV 420

Query: 567 NYYISSEEITCIEK 580
           +YY+ + E+  IE 
Sbjct: 421 DYYVPAAEVERIEN 434


>gi|344200679|ref|YP_004785005.1| cytochrome c oxidase subunit I [Acidithiobacillus ferrivorans SS3]
 gi|343776123|gb|AEM48679.1| cytochrome c oxidase subunit I [Acidithiobacillus ferrivorans SS3]
          Length = 711

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 272/594 (45%), Positives = 395/594 (66%), Gaps = 12/594 (2%)

Query: 1   MLFRGFTDAVMMRLQQAIS--------FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLV 52
           MLFRGF D +MMR QQA++         G+  GYL P H+ Q+++AHG+IMI   A PL+
Sbjct: 79  MLFRGFIDGLMMRTQQAMAVGPHASGMMGAIHGYLTPFHFGQVYSAHGLIMILLAATPLL 138

Query: 53  TGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGI 112
            GI+N ++PLQIGARD+A+P+LN L  W+T+   +L+M SLF+G+FA  GW GY P+  +
Sbjct: 139 VGIMNIVIPLQIGARDMAYPYLNALGLWITAAAVVLIMASLFVGDFAHNGWFGYAPIFEL 198

Query: 113 AQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILI 172
           A SPGVGVDY+IW+LQ+  +GT L  IN IATI+KMRAPGMK   +P+FTWT+L  NI+ 
Sbjct: 199 AYSPGVGVDYWIWTLQLVALGTTLGSINFIATIVKMRAPGMKWSRLPMFTWTSLSANIIA 258

Query: 173 VAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFS 232
           + +FP L   + L+  DRY+GTHFFT   GGN+M+Y NL W+WGHPEVY ++LP FG+ S
Sbjct: 259 LTSFPCLQVAIGLTAADRYLGTHFFTAGFGGNLMLYTNLFWLWGHPEVYFVILPAFGMIS 318

Query: 233 EVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPT 292
           E++ TFS K LFGY +MV AT  I  +S++VWLHHFFTMG G  V+  F + TM++ IPT
Sbjct: 319 EIIPTFSEKPLFGYVTMVLATFAIAGVSWLVWLHHFFTMGMGPYVSTEFSVATMLVGIPT 378

Query: 293 GAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAH 352
           G K+FNW FTMYRGR+ +   + W +G +   ++GG+ G++L++PA N+++HNS+F+VAH
Sbjct: 379 GVKVFNWAFTMYRGRLTYTAAMCWALGALFLLLVGGLTGMMLSIPAINYMVHNSVFVVAH 438

Query: 353 FHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGV 412
           FH +++  +++ +   + YWFPK FGYKL   WGK  FW +  G  + F+P+++ GFMG+
Sbjct: 439 FHMMLL-CIVYAIFGSVIYWFPKVFGYKLNEAWGKAMFWLFSAGTALVFIPMFMEGFMGM 497

Query: 413 TRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRT 471
           TRR+    D     +  I   G L+  + IL+F++ L VS R R        D W   R+
Sbjct: 498 TRRLDWPFDPHWAPYLNIQVLGILVYVLSILAFVVMLYVSIRDRAQH-RAAADAWGTSRS 556

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQD-ILMPKNTNIGILISIF 530
           LEW T+SP P YNFA +P ++  D   + ++      +    D I MP NT I I+I   
Sbjct: 557 LEWLTASPVPFYNFAVVPQVNARDEVAWRREQGLSAQRASHYDAIHMPNNTGIAIIIGGL 616

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           + ++GFAL W +W L++IS +  ++++IY +      + I +EE+ C++++  R
Sbjct: 617 TFVLGFALTWRIWWLSLISLLAIIVMMIYRSAKGDPGHVIPAEEVECMDREAER 670


>gi|407796744|ref|ZP_11143696.1| cytochrome aa3 quinol oxidase subunit I [Salimicrobium sp. MJ3]
 gi|407018898|gb|EKE31618.1| cytochrome aa3 quinol oxidase subunit I [Salimicrobium sp. MJ3]
          Length = 649

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 291/583 (49%), Positives = 398/583 (68%), Gaps = 6/583 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA+MMR Q ++  G+    L    YN+IFT HGV+MIFF+AM  +T ++NF+V
Sbjct: 67  MLFRGGVDALMMRAQTSMP-GNEL--LSAAEYNEIFTTHGVVMIFFMAMAFITALMNFVV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN LSFW+   GA+L  +S  IG   S+GW  Y PL+G   SP +G 
Sbjct: 124 PLQIGARDVAFPRLNALSFWLYFMGAMLFNLSFVIGGSPSSGWTSYFPLAGNELSPHIGT 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY+ +LQIAG+GTL++GIN I TI KMRAPGMKLM MP+FTW+AL TN+LI  AFPVLT
Sbjct: 184 NYYMIALQIAGLGTLITGINFIVTIFKMRAPGMKLMKMPLFTWSALITNLLITFAFPVLT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + T+DR  GTHFFT D GG  M++ N  W+WGHPEVYILVLP FGI+SEV+STFS 
Sbjct: 244 VALAMGTMDRLFGTHFFTMDNGGMAMLWANFFWVWGHPEVYILVLPAFGIYSEVISTFSK 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           + L+GY+SMV A VVI+ L+++VW+HHFFTMG GA VN+ F ITTM I+IPTG KIFNWL
Sbjct: 304 RNLYGYTSMVVAIVVISTLAFLVWVHHFFTMGQGALVNSIFSITTMAIAIPTGIKIFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM++G+I+F VP+L+++GF+  F IGG+ GV+L + +A++  HN++FLVAHFH VII G
Sbjct: 364 FTMWKGKIQFTVPMLYSLGFIPIFTIGGVTGVMLGIASADYQYHNTMFLVAHFHIVIIPG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V+F +++G+ YW+PK FG+ L    GK +FW   IG  +AF P++I G  G  RRM  + 
Sbjct: 424 VVFAMLAGMTYWWPKMFGFMLNERIGKWAFWNIAIGTCLAFFPMFISGLDGQARRMYTYS 483

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +++   IW  ++ FG L +AMG +  +I   V Y  R+   DI  DPW+ RTLEW+T +P
Sbjct: 484 EVAGFGIWNLLSFFGALGLAMGFI--LIVFNVYYSARYATRDIGDDPWDARTLEWATRTP 541

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            P YNFA  P +   + +W  K       K++ +DI MP N+    ++  F  + GF LV
Sbjct: 542 VPEYNFAVTPQVDSREPFWDSKYEGKTLFKEEIKDIHMPNNSGQPFIMGAFFFVAGFGLV 601

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKR 582
           + +W +  ++     +++   +F      +I  +E+   E  +
Sbjct: 602 FSLWPVVYVAAAGIAVLLFIRSFEQDDGRHIHEQEVRDTENDK 644


>gi|403747726|ref|ZP_10955549.1| Cytochrome-c oxidase [Alicyclobacillus hesperidum URH17-3-68]
 gi|403120001|gb|EJY54434.1| Cytochrome-c oxidase [Alicyclobacillus hesperidum URH17-3-68]
          Length = 660

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 291/590 (49%), Positives = 395/590 (66%), Gaps = 10/590 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA ++R Q AI       +L  EHY+QIFT HG IMI F+AMP +  + N +V
Sbjct: 75  MLFRGGADAELLRTQLAIPNNH---FLSAEHYDQIFTTHGTIMILFMAMPFIFALFNIVV 131

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN +SFW+    A+L  +S   G      W+ YPPLS +   PG G 
Sbjct: 132 PLQIGARDVAFPYLNAISFWLFFFAAMLFNLSFVFGGSPDASWVSYPPLSELGFDPGPGE 191

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY+ +LQI GIG++ +GIN +ATI KMRAPGMKLM+MP+FTW+ +   ++I+ AFP L 
Sbjct: 192 NYYLLALQITGIGSIATGINFLATIFKMRAPGMKLMHMPLFTWSTVAACVVIIFAFPALA 251

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             + L TLDR  GTHFFT   GGN MM+VNL W+WGHPEVYI+VLP FG++SEVV+TF+ 
Sbjct: 252 IAIALLTLDRIFGTHFFTILHGGNPMMFVNLFWVWGHPEVYIVVLPAFGVYSEVVATFAR 311

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KR+FGYSSMV + ++I+++SY VW HHFFTMG+GA+VN FF + +M++ IPTG K+FNWL
Sbjct: 312 KRIFGYSSMVASLMLISVISYFVWAHHFFTMGAGADVNTFFAVASMLVGIPTGVKVFNWL 371

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMYRGRIR  +P+LWTI F+  F IGG  G++LA   A++  HNS FL+AHFH V+IGG
Sbjct: 372 FTMYRGRIRMTLPMLWTIAFVPCFAIGGATGIMLAAAPADYQYHNSYFLIAHFHQVLIGG 431

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
           V+FG+++G+ YW+PK FG+KL+   G+ +FWF+ IGFYV FMP Y LGFMG+ RRM ++ 
Sbjct: 432 VVFGMLAGMYYWWPKMFGFKLDERLGRWAFWFFNIGFYVCFMPQYALGFMGMQRRMYTYP 491

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
            D+       I+  G  ++A+G +  +IQ++  Y  ++   D+TGDPW+GRTLEWS  SP
Sbjct: 492 ADMGWNTLNLISTIGAYIMAIGFVFIVIQVL--YSVKYGERDLTGDPWDGRTLEWSLPSP 549

Query: 480 PPVYNFAFIPLIHQSDSWWYMKK----NNFKFPKDKFQDILMPKNTNIGILISIFSLIMG 535
            P YNFA IP +   D WW +K+    +  K   +  + I MPKN+     + +   + G
Sbjct: 550 APHYNFAVIPTVTSRDVWWELKEQGRTDELKPKAEDIKPIHMPKNSARPFFMGLAFFVAG 609

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIRL 585
           F  V+    L  +     +  +I     Y  +Y+I   E+   E    RL
Sbjct: 610 FGFVFDSMWLGFLGLAGVVACLIARALEYNDDYHIPVHEVVETEATLGRL 659


>gi|299820828|ref|ZP_07052717.1| quinol oxidase subunit I [Listeria grayi DSM 20601]
 gi|299817849|gb|EFI85084.1| quinol oxidase subunit I [Listeria grayi DSM 20601]
          Length = 658

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/581 (50%), Positives = 394/581 (67%), Gaps = 8/581 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M FRG  DA+MMR Q A+       +L  +HYN++F+ HGVIMI F+AMP + G++N  V
Sbjct: 65  MFFRGGVDALMMRTQLALP---GMKFLDSQHYNEVFSTHGVIMILFMAMPFIIGLMNIAV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW+   GA+L  +S  IG   + GW  Y PL+     PG G+
Sbjct: 122 PLQIGARDVAFPFLNNLSFWLFFMGAMLFNLSFVIGGSPAAGWTNYAPLAE-EFGPGYGI 180

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y+W +QIAGIGTL++GIN   TII+MR  GM LM MP+FTWT L T ++I+ AFPVLT
Sbjct: 181 NFYLWGIQIAGIGTLMTGINFFVTIIRMRTKGMTLMKMPMFTWTVLVTCLIIILAFPVLT 240

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T D   GT FFT   GG  MM+ NL W+WGHPEVYI+VLP FGIFSEV+STFS 
Sbjct: 241 VALALMTFDHLFGTAFFTLGNGGLPMMWANLFWVWGHPEVYIVVLPAFGIFSEVISTFSK 300

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY +MV A V+I++LS++VW+HHFFTMGSGA VN FF ITTM+ISIPTG KIFNWL
Sbjct: 301 KKLFGYPAMVAAVVLISVLSFLVWVHHFFTMGSGALVNTFFSITTMMISIPTGIKIFNWL 360

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTMY+G+I F  P+LW++ F+  FV+GG+ GV+LA+ AA++  HN+ FLV+HFH V+I G
Sbjct: 361 FTMYKGKITFTTPMLWSLAFIPNFVVGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAG 420

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +G  YW+PK FGYKL    GK  FW +++GF V F P Y LG  G+ RR+ ++ 
Sbjct: 421 TVFSCFAGFIYWYPKMFGYKLNEKIGKWFFWVFVVGFNVCFFPQYFLGLDGMPRRIYTYV 480

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           +         I+  G  ++ +G L     +I S+  +H+  +++GD W+GRTLEW+TSS 
Sbjct: 481 QGDGWTTLNFISTVGAFVMGIGFLILCYNIIYSF--KHSKREVSGDVWDGRTLEWATSSA 538

Query: 480 -PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFAL 538
            PP YNFA +P  ++ D +W MK+   K+    ++ I MP NT +G ++S+F  I GF  
Sbjct: 539 VPPKYNFAVLPEWNELDGFWEMKQAGKKYDNKNYKSIHMPSNTMLGFIMSVFLFIAGFGF 598

Query: 539 VWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIE 579
           +++ + +  I    TL  +IY +F     Y++  EEI   E
Sbjct: 599 IFYWYWIGFIGIAGTLACMIYRSFQVDDGYHVEVEEIVATE 639


>gi|261420867|ref|YP_003254549.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus sp. Y412MC61]
 gi|297531652|ref|YP_003672927.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus sp. C56-T3]
 gi|319768538|ref|YP_004134039.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus sp. Y412MC52]
 gi|261377324|gb|ACX80067.1| cytochrome aa3 quinol oxidase, subunit I [Geobacillus sp. Y412MC61]
 gi|297254904|gb|ADI28350.1| cytochrome aa3 quinol oxidase, subunit I [Geobacillus sp. C56-T3]
 gi|317113404|gb|ADU95896.1| cytochrome aa3 quinol oxidase, subunit I [Geobacillus sp. Y412MC52]
          Length = 648

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/587 (50%), Positives = 396/587 (67%), Gaps = 8/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q       +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLT---APNMKFLDAQHYNEIFTTHGTIMILFMAMPFIIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+G   S GVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGALLFNISFVIGGSPDAGWTAYFPLAGNEFSHGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T +LI+ AFPVLT
Sbjct: 182 NYYAVALQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTILITCVLIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GT FFT   GG  M++ NL WIWGHPEVYI++LP FGIFSEVVSTF+ 
Sbjct: 242 VALALMTFDRVFGTQFFTMANGGMSMLWANLFWIWGHPEVYIVILPSFGIFSEVVSTFAQ 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV + V I  LS+IVW+HHFFTMG+G  VN+ F ITTM I+IPTG KIFNWL
Sbjct: 302 KRLFGYKAMVGSIVGIAFLSFIVWVHHFFTMGAGPAVNSAFSITTMAIAIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IRF   +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTIRKGKIRFTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +G++YW+PK FG+ L    GK +FW ++IGF V F P+Y LG MG+TRRM ++ 
Sbjct: 422 TVFACFAGLHYWYPKMFGHILNERLGKWTFWLFMIGFNVCFFPMYFLGLMGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             +       +A  G +L+ +G +  ++   + Y  R+   D+TGDPWNGRTLEW+T+SP
Sbjct: 482 AGLGWTPLNVVATVGAVLMGIGFI--VLCYNIYYSARYGERDMTGDPWNGRTLEWATASP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P  YNF   P++   D++W MKK    F+  ++  + I MP N+     +S+   + GF 
Sbjct: 540 PVHYNFPVTPVVEDVDAYWVMKKKYGGFQVKEEDLKPIHMPSNSGRPFWMSVAFFVAGFG 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           LV+  + L I+  +  ++ +I  +F     YYI  +EI  +E+   +
Sbjct: 600 LVFKWFALAIVGALFIVLGLILRSFEDDDGYYIPVDEIKRMEQAARK 646


>gi|375010638|ref|YP_004984271.1| quinol oxidase subunit 1 [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|359289487|gb|AEV21171.1| Quinol oxidase subunit 1 [Geobacillus thermoleovorans CCB_US3_UF5]
          Length = 648

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 295/587 (50%), Positives = 395/587 (67%), Gaps = 8/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q       +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLT---APNMKFLDAQHYNEIFTTHGTIMILFMAMPFIIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+G   S GVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGALLFNISFVIGGSPDAGWTAYFPLAGNEFSHGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T +LI+ AFPVLT
Sbjct: 182 NYYAVALQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTILITCVLIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GT FFT   GG  M++ NL WIWGHPEVYI++LP FGIFSEVVSTF+ 
Sbjct: 242 VALALMTFDRVFGTQFFTMANGGMSMLWANLFWIWGHPEVYIVILPSFGIFSEVVSTFAQ 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV + V I  LS+IVW+HHFFTMG+G  VN+ F ITTM I+IPTG KIFNWL
Sbjct: 302 KRLFGYKAMVGSIVGIAFLSFIVWVHHFFTMGAGPAVNSAFSITTMAIAIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IRF   +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTIRKGKIRFTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +G++YW+PK FG+ L    GK +FW ++IGF V F P+Y LG MG+TRRM ++ 
Sbjct: 422 TVFACFAGLHYWYPKMFGHILNERLGKWTFWLFMIGFNVCFFPMYFLGLMGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             +       +A  G  L+ +G +  ++   + Y  R+   D+TGDPWNGRTLEW+T+SP
Sbjct: 482 AGLGWTPLNVVATVGAALMGIGFI--VLCYNIYYSARYGERDMTGDPWNGRTLEWATASP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P  YNF   P++   D++W MKK    F+  ++  + I MP N+     +S+   + GF 
Sbjct: 540 PVHYNFPVTPVVEDVDAYWVMKKKYGGFQVKEEDLKPIHMPSNSGRPFWMSVAFFVAGFG 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           LV+  + L I+  +  ++ +I  +F     YYI  +EI  +E+   +
Sbjct: 600 LVFKWFALAIVGALFIVLGLILRSFEDDDGYYIPVDEIKRMEQAARK 646


>gi|384084019|ref|ZP_09995194.1| cytochrome-c oxidase [Acidithiobacillus thiooxidans ATCC 19377]
          Length = 702

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 272/594 (45%), Positives = 397/594 (66%), Gaps = 12/594 (2%)

Query: 1   MLFRGFTDAVMMRLQQAIS--------FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLV 52
           MLFRGF D +M+R QQ  +        FGS  GYL P H+ Q+++AHG+IMI   A PL+
Sbjct: 79  MLFRGFIDGLMIRTQQVWAVGPHSSGVFGSLHGYLTPFHFGQVYSAHGLIMILLAATPLL 138

Query: 53  TGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGI 112
            G +N IVP+Q+GARD+A+P+LN L  W+T+  A L+MISLF+G+FA  GW  Y P+  +
Sbjct: 139 VGFMNIIVPIQVGARDMAYPYLNALGLWITAAAAALIMISLFVGDFAHNGWFEYAPIFEM 198

Query: 113 AQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILI 172
             SPGVGVDY+IW+LQ+  +GT L GIN++ATIIKMRAPGM    +PIF W +L  N++ 
Sbjct: 199 QYSPGVGVDYWIWTLQLVALGTTLGGINILATIIKMRAPGMTWGKLPIFVWASLSANVIA 258

Query: 173 VAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFS 232
           + +FP L   L L   DRY+G HFFT  +GGN+M+Y NL WIWGHPEVY ++LP FG+ S
Sbjct: 259 LTSFPALQIALALVAADRYLGAHFFTAGMGGNLMLYTNLFWIWGHPEVYFVILPAFGMMS 318

Query: 233 EVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPT 292
           E+  TFS K LFGY +MV A++ I  +S++VWLHHFFTMG+G  VN+ F + TM++ IPT
Sbjct: 319 EIFPTFSEKPLFGYITMVLASMAIAGVSWLVWLHHFFTMGAGPYVNSAFSVATMLVGIPT 378

Query: 293 GAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAH 352
           G K+FNW FTMYRGR+ F   +LW IG +   +IGG+ G++LA+PA N+++HNS+F+VAH
Sbjct: 379 GVKVFNWAFTMYRGRLTFNAAMLWAIGALFLLLIGGLTGMMLAIPAINYMVHNSVFVVAH 438

Query: 353 FHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGV 412
           FH++++  +++ +   + YWFPK FG+KL+ FW K  FW +  G  + F+P+Y+LGFMG+
Sbjct: 439 FHSMLL-VIVYAIFGSVLYWFPKVFGFKLDEFWAKTMFWLFSAGTALVFVPMYMLGFMGM 497

Query: 413 TRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRT 471
           TRR+ +  +   Q +  +   G ++  + +L+F I L VS R  H    +  D W   R+
Sbjct: 498 TRRLEYVFNTGWQPYLDVMELGIVVYTLSVLAFFILLYVSVRD-HAKNRVGADAWGTSRS 556

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFKFPK-DKFQDILMPKNTNIGILISIF 530
           LEW T SP P YNFA +P +++ D   + +++     + + + DI MP NT + I++   
Sbjct: 557 LEWLTHSPVPFYNFAVLPHVNERDELAWRRQHGIDNVRPEHYDDIHMPNNTGVAIIMGGL 616

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           + ++GFAL W +W L I+S +  + ++I  +F     Y I+  E+  +E++  R
Sbjct: 617 TFVLGFALTWRIWWLCIVSLLAIIGLMIIRSFRGDPGYIITGAELQRMEEEAYR 670


>gi|319654030|ref|ZP_08008122.1| cytochrome aa3 quinol oxidase subunit I [Bacillus sp. 2_A_57_CT2]
 gi|317394223|gb|EFV74969.1| cytochrome aa3 quinol oxidase subunit I [Bacillus sp. 2_A_57_CT2]
          Length = 649

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 289/582 (49%), Positives = 395/582 (67%), Gaps = 6/582 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA+MMR Q A+   +  G    + YN+IFT HGV+MI F+AM  +  ++NF V
Sbjct: 67  MLFRGGVDAIMMRAQTAVPENTLLG---AQEYNEIFTTHGVVMIIFMAMAFIMALMNFAV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN LSFW+   GA+L  IS  IG    +GW  Y PL+G   S  VG 
Sbjct: 124 PLQIGARDVAFPRLNALSFWLYFFGAMLFNISFVIGGSPDSGWSSYFPLAGTEYSESVGT 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY+ +LQI+G+GTL++GIN I TI+KMRAPGM LM MP+FTW+AL TN++IV AFPVLT
Sbjct: 184 NYYMLALQISGLGTLITGINFITTILKMRAPGMTLMKMPMFTWSALITNLIIVFAFPVLT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + T+DR   T+FFT   GG  M++ NL W+WGHPEVYIL+LP FGI+SE++STFS 
Sbjct: 244 VALLMGTMDRLFATNFFTTSNGGMDMLWANLFWVWGHPEVYILILPAFGIYSEIISTFSR 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           + L+GY SMV + V I++LS++VW+HHFFTMG GA VN+ F ITTM I++PTG KIFNWL
Sbjct: 304 RNLYGYKSMVISMVAISVLSFLVWVHHFFTMGQGALVNSIFSITTMAIAVPTGIKIFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+I F  P+L+++GF+  F IGG+ GV+L + +A++  HN++FLVAHFH VII G
Sbjct: 364 FTLRKGKIVFTTPMLYSLGFIPIFTIGGVTGVMLGMASADYQYHNTMFLVAHFHLVIIPG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
           V+F +++G+ YW+PK FG+ L    GK SFWF  I   V F P++I G  G  RRM ++ 
Sbjct: 424 VVFAMIAGLFYWWPKMFGFMLNERLGKWSFWFIAISVCVTFFPMFISGLDGQARRMYTYS 483

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
           E     IW  I+  G + +A+G    +I   + Y  R++  DI  DPW+ R+LEW+T SP
Sbjct: 484 ESTGFGIWNLISFIGAIGLAIGFA--LIVYNIYYSIRYSTRDIPADPWDARSLEWATHSP 541

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKDKFQDILMPKNTNIGILISIFSLIMGFALV 539
            P YNFA +P +  ++++W  KK  +K  K K++ I MP N+ +  L+ +   + GFA V
Sbjct: 542 VPEYNFAIVPEVDSTEAFWDYKKKGYKLFKGKYEPIHMPNNSGVPFLMGLVFFVWGFAFV 601

Query: 540 WHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           + MW+L +I+ I     + + +F      YIS EEI   EK 
Sbjct: 602 FGMWILAVIATIGIAACLAHRSFEKDHGRYISVEEIEKTEKD 643


>gi|56963901|ref|YP_175632.1| cytochrome aa3 quinol oxidase subunit I QoxB [Bacillus clausii
           KSM-K16]
 gi|56910144|dbj|BAD64671.1| cytochrome aa3 quinol oxidase subunit I QoxB [Bacillus clausii
           KSM-K16]
          Length = 647

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/586 (51%), Positives = 396/586 (67%), Gaps = 12/586 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA+MMRLQ          +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDAMMMRLQLT---APGMTFLNSQHYNEIFTTHGTIMIIFMAMPFLIGLMNVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFPFLNNLSFW    G  L  IS  IG   + GW  Y PL+    SPGVG 
Sbjct: 122 PLQIGARDVAFPFLNNLSFWTFFFGMALFNISFIIGGSPAAGWTSYFPLASNDFSPGVGQ 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           ++Y   LQ++GIGTL +GIN I TI KMR  GM LM MP+FTWT L T+++IV AFPVLT
Sbjct: 182 NFYALGLQLSGIGTLATGINFIVTIFKMRTKGMTLMKMPMFTWTVLITSMIIVLAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L + T DR  GT FFT    G  M++ NL WIWGHPEVYI++LP FGIFSE++STF+ 
Sbjct: 242 VALAMMTFDRLFGTAFFTLQGQGLDMLWANLFWIWGHPEVYIVILPAFGIFSEIISTFAR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY++MV + V+I+ LS++VW+HHFFTMG+ A VN+FF ITTM ISIPTG KIFNWL
Sbjct: 302 KKLFGYNAMVASVVIISFLSFLVWVHHFFTMGNSAAVNSFFSITTMAISIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+++G+IR  VP+LW++GF+  FVIGG+ GV+LA+ AA++  HN+ FLV+HFH V+I G
Sbjct: 362 FTLHKGKIRITVPMLWSLGFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
            +F   +G+ YW+PK FG++L    GK  FW ++IGF + F P Y LG  G+ RR+  + 
Sbjct: 422 TVFACFAGLVYWYPKMFGHRLNEKIGKWVFWIFMIGFNICFFPQYFLGLDGMPRRIYTY- 480

Query: 421 DISLQIWFQIAAF---GTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTS 477
            +    WF + A    G  ++A+G   F+  +  S+R      D TGDPW+GRTLEW+TS
Sbjct: 481 -LESDNWFSLNALSTVGAFMMAIGFALFVYNIYYSWRYEKR--DTTGDPWDGRTLEWATS 537

Query: 478 SP-PPVYNFAFIPLIHQSDSWWYMKKNNFKFPKD-KFQDILMPKNTNIGILISIFSLIMG 535
           S  PP YNFA +P + + D+ W MK+       D  +Q I MP NT +G ++S+   I  
Sbjct: 538 SAIPPFYNFAKVPEVAERDALWDMKEKGIDPNADTNYQKIHMPSNTWLGPVMSLIMFIAS 597

Query: 536 FALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           FALV+  + L II  I   I +I  +F+Y   YY+S EEIT IE K
Sbjct: 598 FALVFSWFPLAIIGGIGIFICMIIRSFDYNDGYYVSVEEITEIENK 643


>gi|452973780|gb|EME73602.1| cytochrome aa3 quinol oxidase subunit 1 [Bacillus sonorensis L12]
          Length = 647

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/591 (49%), Positives = 398/591 (67%), Gaps = 15/591 (2%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M FRG  D +MMR Q A+       +L   HYN++FT HG IMI F+AMP + G+IN +V
Sbjct: 65  MFFRGGVDGLMMRAQLALPNNH---FLDSNHYNEVFTTHGTIMIIFMAMPFLIGLINVVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LNNLSFW    GA+L  IS  IG   + GW  Y PL+G   SPG G 
Sbjct: 122 PLQIGARDVAFPYLNNLSFWTFMVGAMLFNISFVIGGSPNAGWTAYMPLAGNEMSPGPGQ 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY+  LQIAGIGTLL+GIN + TI+KMR  GM +  MP+FTWT L T+++I+ AFPVLT
Sbjct: 182 NYYLLGLQIAGIGTLLTGINFMVTILKMRTKGMTIWRMPMFTWTTLITSVIIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GT FFT   GG  M++ NL WIWGHPEVYI++LP FGIFSE+++TF+ 
Sbjct: 242 VALALMTFDRLFGTAFFTLQNGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIATFAR 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K+LFGY +MVY+ V I++LS++VWLHHFFTMG+ A+VN+FF ITTM IS+PTG KIFNWL
Sbjct: 302 KQLFGYKAMVYSIVAISMLSFLVWLHHFFTMGNSASVNSFFSITTMAISVPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
            T++RGRI+   P+LW++ F+  FVIGG+ GV+LA+ AA++  HN+ FLV+HFH V+I G
Sbjct: 362 LTLHRGRIKITTPMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHF- 419
            +F   +G  +W+PK FG+KL    GK  FW ++ GF + F P+Y LG  G+ RR+  + 
Sbjct: 422 TVFACFAGFIFWYPKMFGHKLNERIGKWFFWLFMTGFNICFFPMYFLGLQGMPRRIYTYG 481

Query: 420 -ED--ISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRTLEWS 475
            ED   +L +   IA  G LL+A G +     +  S+  RH+  + +GD W  GRTLEW+
Sbjct: 482 AEDGWTALNM---IATIGALLMAAGFIVLCYNIFYSF--RHSKREESGDAWGEGRTLEWA 536

Query: 476 TSSP-PPVYNFAFIPLIHQSDSWWYMKKNNFKF-PKDKFQDILMPKNTNIGILISIFSLI 533
           TSS  PP YNFA +P ++  D++W MK++     P+ KF+ I MP N+    ++S+F   
Sbjct: 537 TSSSIPPHYNFAVLPEVNSPDAFWKMKEDKVDIHPESKFKKIHMPSNSGRPFIMSLFFGF 596

Query: 534 MGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
            GF LV+  + + ++  I   + +I  +F Y   YY+S EEI   E+K  +
Sbjct: 597 AGFGLVFEWYWMGVVGLIGVFLCMILRSFEYDDGYYVSVEEIKETERKNAK 647


>gi|56421993|ref|YP_149311.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus kaustophilus
           HTA426]
 gi|56381835|dbj|BAD77743.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus kaustophilus
           HTA426]
          Length = 648

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 293/587 (49%), Positives = 395/587 (67%), Gaps = 8/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q       +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLT---APNMKFLDAQHYNEIFTTHGTIMILFMAMPFIIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+G   S GVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGAMLFNISFVIGGSPDAGWTAYFPLAGNEFSHGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T +LI+ AFPVLT
Sbjct: 182 NYYAVALQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTILITCVLIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR   T FFT   GG  M++ NL WIWGHPEVYI++LP FGIFSEVVSTF+ 
Sbjct: 242 VALALMTFDRLFDTQFFTMANGGMSMLWANLFWIWGHPEVYIVILPAFGIFSEVVSTFAQ 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV + V I  LS+IVW+HHFFTMG+G  VN+ F ITTM I+IPTG KIFNWL
Sbjct: 302 KRLFGYKAMVGSIVGIAFLSFIVWVHHFFTMGAGPAVNSAFSITTMAIAIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IRF   +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTLRKGKIRFTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +G++YW+PK FG+ L    GK +FW ++IGF + F P+Y LG MG+TRRM ++ 
Sbjct: 422 TVFACFAGLHYWYPKMFGHILNERLGKWTFWLFMIGFNICFFPMYFLGLMGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             +       +A  G +L+ +G +  ++   + Y  R+   D+TGDPWNGRTLEW+T+SP
Sbjct: 482 AGLGWTPLNVVATVGAVLMGIGFI--VLCYNIYYSARYGERDMTGDPWNGRTLEWATASP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P  YNF   P++   D++W MKK    F+  ++  + I MP N+     +S+   + GF 
Sbjct: 540 PVHYNFPVTPVVEDVDAYWVMKKKYGGFQVKEEDLKPIHMPSNSGRPFWMSVAFFVAGFG 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           LV+  + L I+  +  ++ +I  +F     YYI  +EI  +E+   +
Sbjct: 600 LVFKWFALAIVGALFIVLGLILRSFEDDDGYYIPVDEIKRMEQAARK 646


>gi|448239730|ref|YP_007403788.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus sp. GHH01]
 gi|445208572|gb|AGE24037.1| cytochrome aa3 quinol oxidase subunit I [Geobacillus sp. GHH01]
          Length = 648

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/587 (50%), Positives = 395/587 (67%), Gaps = 8/587 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           MLFRG  DA++MR Q       +  +L  +HYN+IFT HG IMI F+AMP + G++N +V
Sbjct: 65  MLFRGGVDALLMRAQLT---APNMKFLDAQHYNEIFTTHGTIMILFMAMPFIIGLMNIVV 121

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP+LN LSFW+   GA+L  IS  IG     GW  Y PL+G   S GVG 
Sbjct: 122 PLQIGARDVAFPYLNALSFWLFFFGALLFNISFVIGGSPDAGWTAYFPLAGNEFSHGVGN 181

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQI+GIGTL++GIN + TI+KMRAPGM LM MP+FTWT L T +LI+ AFPVLT
Sbjct: 182 NYYAVALQISGIGTLMTGINFLVTILKMRAPGMTLMRMPMFTWTILITCVLIIFAFPVLT 241

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GT FFT   GG  M++ NL WIWGHPEVYI++LP FGIFSEVVSTF+ 
Sbjct: 242 VALALMTFDRVFGTQFFTMANGGMSMLWANLFWIWGHPEVYIVILPAFGIFSEVVSTFAQ 301

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           KRLFGY +MV + V I  LS+IVW+HHFFTMG+G  VN+ F ITTM I+IPTG KIFNWL
Sbjct: 302 KRLFGYKAMVGSIVGIAFLSFIVWVHHFFTMGAGPAVNSAFSITTMAIAIPTGVKIFNWL 361

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FT+ +G+IRF   +LW++ F+  FVIGG+ GV+LA+ AA++  HNS FL+AHFH V+I G
Sbjct: 362 FTIRKGKIRFTTAMLWSLAFIPNFVIGGVTGVMLAMAAADYQYHNSYFLIAHFHYVLIAG 421

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRM-SHF 419
            +F   +G++YW+PK FG+ L    GK +FW ++IGF V F P+Y LG MG+TRRM ++ 
Sbjct: 422 TVFACFAGLHYWYPKMFGHILNERLGKWTFWLFMIGFNVCFFPMYFLGLMGMTRRMYTYS 481

Query: 420 EDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             +       +A  G +L+ +G +  ++   + Y  R+   D+TGDPWNGRTLEW+T+SP
Sbjct: 482 AGLGWTPLNVVATVGAVLMGIGFI--VLCYNIYYSARYGERDMTGDPWNGRTLEWATASP 539

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKN--NFKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
           P  YNF   P++   D++W MKK    F   ++  + I MP N+     +S+   + GF 
Sbjct: 540 PVHYNFPVTPVVEDVDAYWVMKKKYGGFHVKEEDLKPIHMPSNSGRPFWMSVAFFVAGFG 599

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRIR 584
           LV+  + L I+  +  ++ +I  +F     Y+I  +EI  +E+   +
Sbjct: 600 LVFKWFALAIVGALFIVLGLILRSFEDDDGYHIPVDEIKRMERAARK 646


>gi|255020822|ref|ZP_05292878.1| Cytochrome O ubiquinol oxidase subunit I [Acidithiobacillus caldus
           ATCC 51756]
 gi|340781390|ref|YP_004747997.1| cytochrome O ubiquinol oxidase subunit I [Acidithiobacillus caldus
           SM-1]
 gi|254969613|gb|EET27119.1| Cytochrome O ubiquinol oxidase subunit I [Acidithiobacillus caldus
           ATCC 51756]
 gi|340555543|gb|AEK57297.1| Cytochrome O ubiquinol oxidase subunit I [Acidithiobacillus caldus
           SM-1]
          Length = 717

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/593 (45%), Positives = 393/593 (66%), Gaps = 12/593 (2%)

Query: 1   MLFRGFTDAVMMRLQQAIS--------FGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLV 52
           MLFRGF D +M+R QQA +        FG+  GYL P HY Q+++AHG+IMI   A PL+
Sbjct: 79  MLFRGFVDGLMIRTQQAWAVGPDSSGVFGALHGYLTPFHYGQVYSAHGLIMILLAATPLL 138

Query: 53  TGIINFIVPLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGI 112
            G +N IVP+QIGARD+A+P+LN L  W+T+ GA L+M SLF+G FA  GW GY P+  I
Sbjct: 139 VGFMNIIVPIQIGARDMAYPYLNALGLWITAAGAALIMASLFVGNFAHNGWFGYAPIFEI 198

Query: 113 AQSPGVGVDYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILI 172
             SPGVGVDY++W+LQ+  +GT L GIN++ TIIKMRAPGM    +PIF W +L  NI+ 
Sbjct: 199 QYSPGVGVDYWMWTLQLLALGTTLGGINLLVTIIKMRAPGMTWFRLPIFVWASLSANIIA 258

Query: 173 VAAFPVLTSVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFS 232
           + +FP L   L L   DRY+G HFFT  LGGN+M+Y NL WIWGHPEVY ++LP FG+ S
Sbjct: 259 LTSFPALQVALGLVAADRYLGAHFFTAGLGGNLMLYTNLFWIWGHPEVYFVILPAFGMMS 318

Query: 233 EVVSTFSSKRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPT 292
           E+   FS K LFGY +MV A+  I  +S++VWLHHFFTMG+G +VN+FF + TM++ IPT
Sbjct: 319 EIFPVFSEKPLFGYITMVLASFAIAGVSWLVWLHHFFTMGAGPDVNSFFSVATMLVGIPT 378

Query: 293 GAKIFNWLFTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAH 352
           G K+FNW FTMYRGR+ F   +LW IG +   +IGG+ G++LA+PA N+++HNS+F++AH
Sbjct: 379 GVKVFNWAFTMYRGRLTFTAAMLWAIGALFLLLIGGLTGMMLAIPAINYMVHNSVFVIAH 438

Query: 353 FHNVIIGGVLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGV 412
           FH++++  +++ +   + +WFPK FG+KL+ FW K  FW +  G  + F+P+Y+LGFMG+
Sbjct: 439 FHSMLL-VIVYAVFGSVIFWFPKVFGFKLDEFWAKTMFWLFTTGTVLVFVPMYMLGFMGM 497

Query: 413 TRRMSHFEDISLQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPW-NGRT 471
           TRR+ +  ++  Q +  +   G ++  + + +F + L VS R R     +  D W   R+
Sbjct: 498 TRRLDYVFNVHWQPYLLVMEGGIVVYTLSVFAFFVLLYVSIRDR-VKNRVGADAWGTSRS 556

Query: 472 LEWSTSSPPPVYNFAFIPLIHQSDSWWYMKKNNFK-FPKDKFQDILMPKNTNIGILISIF 530
           LEW T SP P YNFA  P ++  D   + + N        K+ DI MP NT + + I   
Sbjct: 557 LEWLTHSPVPFYNFAVTPHVNARDEAAWRRANGIAGVQPAKYVDIHMPNNTAVALYIGAL 616

Query: 531 SLIMGFALVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKKRI 583
           + ++GFAL W +W L + S +  ++++I  ++     Y +++ E+  +E++ I
Sbjct: 617 TFVLGFALTWRIWWLCLASLVAIIVLMIVRSYRGDPGYIVTAAELERMEREAI 669


>gi|149182656|ref|ZP_01861124.1| cytochrome aa3 quinol oxidase subunit I [Bacillus sp. SG-1]
 gi|148849625|gb|EDL63807.1| cytochrome aa3 quinol oxidase subunit I [Bacillus sp. SG-1]
          Length = 658

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/584 (50%), Positives = 389/584 (66%), Gaps = 8/584 (1%)

Query: 1   MLFRGFTDAVMMRLQQAISFGSSFGYLPPEHYNQIFTAHGVIMIFFVAMPLVTGIINFIV 60
           M FRG  D ++M+ Q +        +L  +HYN+IFT HGVIMI F+AMP + G++N +V
Sbjct: 67  MFFRGGIDGLLMKAQTS---RPEMEFLSSQHYNEIFTTHGVIMILFMAMPFLIGLMNVVV 123

Query: 61  PLQIGARDVAFPFLNNLSFWMTSGGAILVMISLFIGEFASTGWLGYPPLSGIAQSPGVGV 120
           PLQIGARDVAFP LN LSFW+   GA+L  IS  IG     GW  Y PL+G   SPG+  
Sbjct: 124 PLQIGARDVAFPQLNALSFWLFFAGAMLFNISFVIGGSPDAGWTSYFPLAGKEFSPGIAN 183

Query: 121 DYYIWSLQIAGIGTLLSGINMIATIIKMRAPGMKLMNMPIFTWTALCTNILIVAAFPVLT 180
           +YY  +LQIAGIGTL++GIN I TI+KMR  GM LM MP+FTWT L T+++IVAAFP+ T
Sbjct: 184 NYYAVALQIAGIGTLMTGINFIVTILKMRTKGMGLMKMPMFTWTTLITSVIIVAAFPIFT 243

Query: 181 SVLFLSTLDRYIGTHFFTNDLGGNIMMYVNLIWIWGHPEVYILVLPVFGIFSEVVSTFSS 240
             L L T DR  GTHFFT   GG  M++ NL W+WGHPEVYI+ LP FGIFSEV++TFS 
Sbjct: 244 VALALMTTDRIFGTHFFTVSGGGMDMLWANLFWLWGHPEVYIVALPAFGIFSEVIATFSR 303

Query: 241 KRLFGYSSMVYATVVITLLSYIVWLHHFFTMGSGANVNAFFGITTMIISIPTGAKIFNWL 300
           K LFGY SMVYA V I +LS +VW+HHF+TMGSG  VN+FF ITTM+I++PTG KIFNWL
Sbjct: 304 KSLFGYKSMVYAIVGIAVLSMVVWVHHFYTMGSGPAVNSFFSITTMMIAVPTGVKIFNWL 363

Query: 301 FTMYRGRIRFEVPILWTIGFMITFVIGGMAGVILAVPAANFLLHNSLFLVAHFHNVIIGG 360
           FTM +GRI+    +LW + F+ TF IGG+ GV+LA+ AA++  HN+LFLVAHFH V+I G
Sbjct: 364 FTMRKGRIKMTTAMLWALAFIPTFTIGGVTGVMLAMGAADYQYHNTLFLVAHFHYVLIPG 423

Query: 361 VLFGLMSGINYWFPKAFGYKLEPFWGKCSFWFWLIGFYVAFMPLYILGFMGVTRRMSHFE 420
           V++ + +G+ YW+PK FG+ L    GK  FW + IGF V FMP++ LG  G  RR   F 
Sbjct: 424 VVYAVFAGLYYWWPKMFGHMLNEKLGKWHFWLFNIGFNVTFMPMFFLGLKGAVRRSYTFS 483

Query: 421 DIS-LQIWFQIAAFGTLLIAMGILSFIIQLIVSYRKRHTLIDITGDPWNGRTLEWSTSSP 479
             S     F ++A G++++A G   F     + +  R+   DI+ DPW+ RTLEW+T+SP
Sbjct: 484 AESGFSELFLVSAIGSIILAAGFAVFCYN--IYWSIRYADRDISSDPWDARTLEWATASP 541

Query: 480 PPVYNFAFIPLIHQSDSWWYMKKNN--FKFPKDKFQDILMPKNTNIGILISIFSLIMGFA 537
              YNFA  P +   D++W+MKKNN          + I MP N  +  ++ +F  I GF 
Sbjct: 542 VQYYNFAQQPEVKAIDAFWHMKKNNEGLTLSDSDIKKIHMPSNAGLPFIMCVFFGIAGFF 601

Query: 538 LVWHMWLLTIISFIITLIIVIYNTFNYKRNYYISSEEITCIEKK 581
           LV+   + TII+ +  +  +IY +F+Y   YYI  EEI  IE+ 
Sbjct: 602 LVFEWQIATIIASLGIIAGLIYRSFDYNDGYYIPVEEIKDIERS 645


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.332    0.145    0.476 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,595,141,514
Number of Sequences: 23463169
Number of extensions: 421277909
Number of successful extensions: 1937626
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 237274
Number of HSP's successfully gapped in prelim test: 2034
Number of HSP's that attempted gapping in prelim test: 1399647
Number of HSP's gapped (non-prelim): 263371
length of query: 585
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 437
effective length of database: 8,886,646,355
effective search space: 3883464457135
effective search space used: 3883464457135
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 80 (35.4 bits)