BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy238
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 8/151 (5%)
Query: 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPR 60
+DTE VEV W E+Q +RK K++ ++ ++ E L L+HPNIV+F+ W T K
Sbjct: 46 LDTETTVEVAWCELQ--DRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKC 103
Query: 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTC 120
++ +TE +SG+LK +LKR K V K+ + + WC QIL L +LH+ +PPIIH +L C
Sbjct: 104 IVLVTELXTSGTLKTYLKRFK--VXKIKV--LRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 121 DTIFIQH-NGLVKIGCDTYTHTIENKKYLSA 150
D IFI G VKIG D T++ + A
Sbjct: 160 DNIFITGPTGSVKIG-DLGLATLKRASFAKA 189
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFI 64
+GV V +VQ + + KA+ + I+++ + L QL HPN++K++ + + + + +
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKEI-DLLKQLNHPNVIKYYASFIEDNE----LNIV 110
Query: 65 TEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF 124
E +G L + +K K+ + +P ++ Q+ SAL ++HS ++H ++ +F
Sbjct: 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVF 168
Query: 125 IQHNGLVKIG 134
I G+VK+G
Sbjct: 169 ITATGVVKLG 178
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR- 94
+ +L HPNIV F T P + +TEY+S GSL + L ++ + L +R
Sbjct: 88 MKRLRHPNIVLFMGAVTQP----PNLSIVTEYLSRGSLYRLLHKSGAREQ---LDERRRL 140
Query: 95 -WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQ 153
+ ++YLH+ +PPI+H NL + + VK+ CD ++ +LS ++
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV-CDFGLSRLKASTFLS-SKS 198
Query: 154 TYGRP 158
G P
Sbjct: 199 AAGTP 203
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLP 88
+++ E L L H NIVK+ T+ + + I E++ SGSLK++L + K K+
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNG--IKLIMEFLPSGSLKEYLPKNKN---KIN 124
Query: 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYL 148
L ++ QI + YL S +H +L + ++ VKIG T IE K
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 149 SATRQTYGRPI 159
+ P+
Sbjct: 183 XTVKDDRDSPV 193
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLP 88
+++ E L L H NIVK+ T+ + + I E++ SGSLK++L + K K+
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNG--IKLIMEFLPSGSLKEYLPKNKN---KIN 112
Query: 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYL 148
L ++ QI + YL S +H +L + ++ VKIG T IE K
Sbjct: 113 LKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 170
Query: 149 SATRQTYGRPI 159
+ P+
Sbjct: 171 XTVKDDRDSPV 181
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR- 94
+ +L HPNIV F T P + +TEY+S GSL + L ++ + L +R
Sbjct: 88 MKRLRHPNIVLFMGAVTQP----PNLSIVTEYLSRGSLYRLLHKSGAREQ---LDERRRL 140
Query: 95 -WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQ 153
+ ++YLH+ +PPI+H +L + + VK+ CD ++ +L ++
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV-CDFGLSRLKASXFLX-SKX 198
Query: 154 TYGRP 158
G P
Sbjct: 199 AAGTP 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 55/139 (39%), Gaps = 27/139 (19%)
Query: 17 SERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
SERK F + L+++ HPNIVK + + V + EY GSL
Sbjct: 44 SERKAFIVE-------LRQLSRVNHPNIVKLYGACLNP------VCLVMEYAEGGSLYNV 90
Query: 77 LKRTKRNVKKLP---LSAWKRWCSQILSALSYLHSCSP-PIIHGNLTCDTIFIQHNGLV- 131
L + LP + WC Q ++YLHS P +IH +L + + G V
Sbjct: 91 L----HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 146
Query: 132 -----KIGCDTYTHTIENK 145
CD TH NK
Sbjct: 147 KICDFGTACDIQTHMTNNK 165
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 55/139 (39%), Gaps = 27/139 (19%)
Query: 17 SERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
SERK F + L+++ HPNIVK + + V + EY GSL
Sbjct: 43 SERKAFIVE-------LRQLSRVNHPNIVKLYGACLNP------VCLVMEYAEGGSLYNV 89
Query: 77 LKRTKRNVKKLP---LSAWKRWCSQILSALSYLHSCSP-PIIHGNLTCDTIFIQHNGLV- 131
L + LP + WC Q ++YLHS P +IH +L + + G V
Sbjct: 90 L----HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 132 -----KIGCDTYTHTIENK 145
CD TH NK
Sbjct: 146 KICDFGTACDIQTHMTNNK 164
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 24 AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK----- 78
A + Q+ E LT L+H +IVKF+ D +I + EYM G L +FL+
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFY----GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPD 114
Query: 79 -------RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLV 131
+ ++ +L LS SQI S + YL S +H +L + N LV
Sbjct: 115 AMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLV 172
Query: 132 KIG 134
KIG
Sbjct: 173 KIG 175
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L+ + HP I+ R W T D ++ I +Y+ G L L++++R P K +
Sbjct: 60 LSIVTHPFII---RMWG-TFQDAQQIFMIMDYIEGGELFSLLRKSQR----FPNPVAKFY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
+++ AL YLHS II+ +L + I + NG +KI + + + Y Y
Sbjct: 112 AAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDY 169
Query: 156 GRP 158
P
Sbjct: 170 IAP 172
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 91
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH NL I
Sbjct: 92 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRNLATRNI 146
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 147 LVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 39 LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQ 98
LEHPN++KF + DK R+ FITEY+ G+L+ +K + P S +
Sbjct: 64 LEHPNVLKF---IGVLYKDK-RLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKD 116
Query: 99 ILSALSYLHSCSPPIIHGNLTCDTIFIQHN--------GLVKIGCDTYT 139
I S ++YLHS + IIH +L ++ N GL ++ D T
Sbjct: 117 IASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 98 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 152
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 153 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 156 GRPI 159
PI
Sbjct: 209 KIPI 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 71 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 125
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 126 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 156 GRPI 159
PI
Sbjct: 182 KIPI 185
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 88 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 142
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 143 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 156 GRPI 159
PI
Sbjct: 199 KIPI 202
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI+ T KP V+ ITEYM +GSL FL++ + L R
Sbjct: 84 MGQFDHPNIIHLEGVVTKC---KP-VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR- 138
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL S +H +L I + N + K+ + +E+ + T +
Sbjct: 139 --GIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 194
Query: 156 GRPI 159
PI
Sbjct: 195 KIPI 198
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 94
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 95 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 149
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 150 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 90
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 145
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 93
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 94 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 148
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 88
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 89 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 143
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 144 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 108
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 109 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 163
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 89
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 90 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 144
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 145 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 20 KNFKAQEEKIQQVFEN---LTQLEHPNIVKFHRYWTDTHN--------DKPRVIFI-TEY 67
K + EEK+ + L L H +V+++ W + N K +FI EY
Sbjct: 37 KKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEY 96
Query: 68 MSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH 127
+G+L + N ++ + R QIL ALSY+HS IIH +L IFI
Sbjct: 97 CENGTLYDLIHSENLNQQR---DEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDE 151
Query: 128 NGLVKIG 134
+ VKIG
Sbjct: 152 SRNVKIG 158
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 90
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 145
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 96
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 97 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 151
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 152 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 108
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 109 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 163
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 90
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 145
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 121
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 122 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 176
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 177 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 95
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 96 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 150
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 151 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 97
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 98 IMEYLPYGSLRDYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 152
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 153 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI+ T KP V+ ITEYM +GSL FL++ + L R
Sbjct: 69 MGQFDHPNIIHLEGVVTKC---KP-VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR- 123
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL S +H +L I + N + K+ + +E+ + T +
Sbjct: 124 --GIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 179
Query: 156 GRPI 159
PI
Sbjct: 180 KIPI 183
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TEYM +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI+ T + KP V+ +TEYM +GSL FLK+ + L R
Sbjct: 77 MGQFDHPNIIHLEGVVTKS---KP-VMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRG 132
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
S + + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 133 IS---AGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 187
Query: 156 GRPI 159
PI
Sbjct: 188 KIPI 191
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI+ T KP V+ ITEYM +GSL FL++ + L R
Sbjct: 63 MGQFDHPNIIHLEGVVTKC---KP-VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR- 117
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL S +H +L I + N + K+ + +E+ + T +
Sbjct: 118 --GIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 173
Query: 156 GRPI 159
PI
Sbjct: 174 KIPI 177
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 93
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I E++ GSL+++L++ K + + L ++ SQI + YL + IH +L I
Sbjct: 94 IMEFLPYGSLREYLQKHKERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 148
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E+I+ E L L+HPNI+K + D HN + + E G L + + + K
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHN----MYIVMETCEGGELLERIVSAQARGKA 120
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
L Q+++AL+Y HS ++H +L + I Q
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQ 158
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FK Q EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 46 FKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 101
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ R ++ + + +++ +ALSY HS +IH ++ + + + NG +KI
Sbjct: 102 ELQKLSRFDEQRTAT----YITELANALSYCHSKR--VIHRDIKPENLLLGSNGELKIA 154
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FK Q EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 46 FKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 101
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ R ++ + + +++ +ALSY HS +IH ++ + + + NG +KI
Sbjct: 102 ELQKLSRFDEQRTAT----YITELANALSYCHSKR--VIHRDIKPENLLLGSNGELKIA 154
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 6 GVEVVWNEVQFSERKNFKA-QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFI 64
G+EV + ++ +KA +++Q + QL+HP+I++ + Y+ D++ V +
Sbjct: 36 GLEVAIKMID--KKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----YVYLV 89
Query: 65 TEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF 124
E +G + ++L K VK + + + QI++ + YLHS I+H +LT +
Sbjct: 90 LEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLL 144
Query: 125 IQHNGLVKIG 134
+ N +KI
Sbjct: 145 LTRNMNIKIA 154
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 25/147 (17%)
Query: 10 VWNEVQFSERKNFKAQEEKIQQVFENLTQLE----HPNIVKFHRYWT----DTHNDKPRV 61
V + +++ ++ +EEK + + + + ++ HPNIV+F + ++ +
Sbjct: 50 VGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 62 IFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILS-------ALSYLHSCSPPII 114
+ +TE + G L +FLK+ + + PLS C +L A+ ++H PPII
Sbjct: 110 LLLTE-LCKGQLVEFLKKME---SRGPLS-----CDTVLKIFYQTCRAVQHMHRQKPPII 160
Query: 115 HGNLTCDTIFIQHNGLVKIGCDTYTHT 141
H +L + + + + G +K+ CD + T
Sbjct: 161 HRDLKVENLLLSNQGTIKL-CDFGSAT 186
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKFS--- 487
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 488 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545
Query: 147 YLSATR 152
Y A++
Sbjct: 546 YYKASK 551
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 20 KNFKAQEEKIQQVFEN---LTQLEHPNIVKFHRYWTDTHN--------DKPRVIFI-TEY 67
K + EEK+ + L L H +V+++ W + N K +FI EY
Sbjct: 37 KKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEY 96
Query: 68 MSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH 127
+ +L + N ++ + R QIL ALSY+HS IIH NL IFI
Sbjct: 97 CENRTLYDLIHSENLNQQR---DEYWRLFRQILEALSYIHSQG--IIHRNLKPXNIFIDE 151
Query: 128 NGLVKIG 134
+ VKIG
Sbjct: 152 SRNVKIG 158
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 20/125 (16%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E+I++ L Q+ HPNI+ H D + ++ V+ I E +S G L FL + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLH----DVYENRTDVVLILELVSGGELFDFLAQK----ES 111
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF-------IQHNGLVKIGCDTYT 139
L + QIL ++YLH + I H +L + I I H L+ G
Sbjct: 112 LSEEEATSFIKQILDGVNYLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL---A 166
Query: 140 HTIEN 144
H IE+
Sbjct: 167 HEIED 171
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 104
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 105 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162
Query: 147 YLSATR 152
Y A++
Sbjct: 163 YYKASK 168
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 111 LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 168
Query: 147 YLSATR 152
Y A++
Sbjct: 169 YYKASK 174
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 109
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 110 LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 167
Query: 147 YLSATR 152
Y A++
Sbjct: 168 YYKASK 173
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALS LH+ +IH ++ D+I
Sbjct: 226 VMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG--VIHRDIKSDSI 278
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ H+G VK+ C + + +K L T
Sbjct: 279 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 310
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 113 LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170
Query: 147 YLSATR 152
Y A++
Sbjct: 171 YYKASK 176
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 107
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 108 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Query: 147 YLSATR 152
Y A++
Sbjct: 166 YYKASK 171
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 59 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 114
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 115 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 167
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 107
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 108 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Query: 147 YLSATR 152
Y A++
Sbjct: 166 YYKASK 171
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS--- 135
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 136 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
Query: 147 YLSATR 152
Y A++
Sbjct: 194 YYKASK 199
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALS LH+ +IH ++ D+I
Sbjct: 149 VMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG--VIHRDIKSDSI 201
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ H+G VK+ C + + +K L T
Sbjct: 202 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 26 EEKIQQVFENLTQ-------LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78
+E I Q EN+ Q L+HPNI+ +P + + E+ G L + L
Sbjct: 43 DEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK----EPNLCLVMEFARGGPLNRVLS 98
Query: 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFI 125
K++P W QI ++YLH PIIH +L I I
Sbjct: 99 G-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 123
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 124 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 176
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 123
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 124 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 176
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALS LH+ +IH ++ D+I
Sbjct: 106 VMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG--VIHRDIKSDSI 158
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ H+G VK+ C + + +K L T
Sbjct: 159 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALS LH+ +IH ++ D+I
Sbjct: 104 VMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG--VIHRDIKSDSI 156
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ H+G VK+ C + + +K L T
Sbjct: 157 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 43 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 98
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 99 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 151
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TE M +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 100
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 101 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 153
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G + +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPRGEVYK 102
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 103 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 155
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G + +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPRGEVYK 102
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 103 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 155
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 44 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 99
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 100 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 152
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 102
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 103 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 155
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 30 QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPL 89
+Q + L L H +I+K+ D + + + EY+ GSL+ +L R + +L L
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCED--QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 121
Query: 90 SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
A QI ++YLHS IH NL + + ++ LVKIG
Sbjct: 122 FA-----QQICEGMAYLHSQH--YIHRNLAARNVLLDNDRLVKIG 159
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 100
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 101 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 153
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 102
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 103 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 155
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 100
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 101 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 153
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 102
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 103 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 43 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 98
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 99 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 151
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 43 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 98
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 99 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 151
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 30 QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPL 89
+ VFE + HP +V H + + R+ F+ EY++ G L ++R + KLP
Sbjct: 103 KHVFEQASN--HPFLVGLHSCF----QTESRLFFVIEYVNGGDLMFHMQRQR----KLPE 152
Query: 90 SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ + ++I AL+YLH II+ +L D + + G +K+
Sbjct: 153 EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKL 194
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 46 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 101
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 102 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 154
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 44 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 99
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 100 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 152
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALS LH+ +IH ++ D+I
Sbjct: 95 VMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG--VIHRDIKSDSI 147
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ H+G VK+ C + + +K L T
Sbjct: 148 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 41 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 96
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 97 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 149
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q EHPNI++ T N P V+ +TE+M +G+L FL+ + L R
Sbjct: 69 MGQFEHPNIIRLEGVVT---NSMP-VMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR- 123
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL S +H +L I + N + K+ + +E +++ TY
Sbjct: 124 --GIASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE----NSSDPTY 175
Query: 156 GRPISGQYEI 165
+ G+ I
Sbjct: 176 TSSLGGKIPI 185
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 100
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 101 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 153
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 39 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 94
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 95 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 147
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 100
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 101 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 153
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 30 QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPL 89
+ VFE + HP +V H + + R+ F+ EY++ G L ++R + KLP
Sbjct: 71 KHVFEQASN--HPFLVGLHSCF----QTESRLFFVIEYVNGGDLMFHMQRQR----KLPE 120
Query: 90 SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ + ++I AL+YLH II+ +L D + + G +K+
Sbjct: 121 EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKL 162
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALS LH+ +IH ++ D+I
Sbjct: 99 VMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG--VIHRDIKSDSI 151
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ H+G VK+ C + + +K L T
Sbjct: 152 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 150
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q EHPNI++ T N P V+ +TE+M +G+L FL+ + L R
Sbjct: 71 MGQFEHPNIIRLEGVVT---NSMP-VMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR- 125
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
I S + YL S +H +L I + N + K+
Sbjct: 126 --GIASGMRYLAEMS--YVHRDLAARNILVNSNLVCKV 159
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGTVYR 100
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 101 ELQK----LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIA 153
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FKAQ EK +++ E + L HPNI++ + Y+ +D RV I EY G++ +
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDSTRVYLILEYAPLGTVYR 97
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ + K + +++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 98 ELQK----LSKFDEQRTATYITELANALSYCHSKK--VIHRDIKPENLLLGSAGELKIA 150
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E+I++ L ++ HPNI+ H D +K V+ I E +S G L FL +
Sbjct: 53 EEIEREVNILREIRHPNIITLH----DIFENKTDVVLILELVSGGELFDFLAEK----ES 104
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L ++ QIL + YLHS I H +L + I +
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIML 141
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ L+H +VK H T K + ITE+M+ GSL FLK + + K PL +
Sbjct: 64 MKTLQHDKLVKLHAVVT-----KEPIYIITEFMAKGSLLDFLKSDEGS--KQPLPKLIDF 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+QI ++++ + IH +L I + + + KI IE+ +Y
Sbjct: 117 SAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 166
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 30 QQVFENLTQLEHPNIVKFHR-YWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLP 88
+ VFE + HP +V H + T++ R+ F+ EY++ G L ++R + KLP
Sbjct: 56 KHVFEQASN--HPFLVGLHSCFQTES-----RLFFVIEYVNGGDLMFHMQRQR----KLP 104
Query: 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ + ++I AL+YLH II+ +L D + + G +K+
Sbjct: 105 EEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKL 147
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 30 QQVFENLTQLEHPNIVKFHR-YWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLP 88
+ VFE + HP +V H + T++ R+ F+ EY++ G L ++R + KLP
Sbjct: 60 KHVFEQASN--HPFLVGLHSCFQTES-----RLFFVIEYVNGGDLMFHMQRQR----KLP 108
Query: 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ + ++I AL+YLH II+ +L D + + G +K+
Sbjct: 109 EEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKL 151
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E+I++ L ++ HPNI+ H D +K V+ I E +S G L FL +
Sbjct: 74 EEIEREVNILREIRHPNIITLH----DIFENKTDVVLILELVSGGELFDFLAEK----ES 125
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L ++ QIL + YLHS I H +L + I +
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIML 162
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ L+H +VK H T K + ITE+M+ GSL FLK + + K PL +
Sbjct: 237 MKTLQHDKLVKLHAVVT-----KEPIYIITEFMAKGSLLDFLKSDEGS--KQPLPKLIDF 289
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+QI ++++ + IH +L I + + + KI IE+ +Y
Sbjct: 290 SAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TE M +GSL FL++ + L R
Sbjct: 71 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR- 125
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 126 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 156 GRPI 159
PI
Sbjct: 182 KIPI 185
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + KP V+ +TE M +GSL FL++ + L R
Sbjct: 100 MGQFDHPNIIRLEGVVTKS---KP-VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I S + YL +H +L I I N + K+ + +E+ + T +
Sbjct: 155 --GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 156 GRPI 159
PI
Sbjct: 211 KIPI 214
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E+I++ L ++ HPNI+ H D +K V+ I E +S G L FL +
Sbjct: 60 EEIEREVNILREIRHPNIITLH----DIFENKTDVVLILELVSGGELFDFLAEK----ES 111
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L ++ QIL + YLHS I H +L + I +
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIML 148
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 28 KIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87
KI++ +NL HP+I+K ++ + T +D + + EY+S G L ++ + R +K
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVIS-TPSD---IFMVMEYVSGGELFDYICKNGRLDEK- 116
Query: 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+R QILS + Y H ++H +L + + + + KI ++ + + ++
Sbjct: 117 ---ESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171
Query: 148 LSATRQTYGRPISGQYEIVT 167
L R + G P E+++
Sbjct: 172 L---RXSCGSPNYAAPEVIS 188
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 169 YTA--RQGAKFPI 179
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 30 QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPL 89
+Q + L L H +I+K+ D + + + EY+ GSL+ +L R + +L L
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCED--QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 121
Query: 90 SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
A QI ++YLH+ IH NL + + ++ LVKIG
Sbjct: 122 FA-----QQICEGMAYLHAQH--YIHRNLAARNVLLDNDRLVKIG 159
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR--YWTDTHNDKPRVIF 63
G V ++Q S ++ + E +I E L L+H NIVK+ Y N K
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREI----EILKSLQHDNIVKYKGVCYSAGRRNLK----L 93
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
I EY+ GSL+ +L+ + + L ++ SQI + YL + IH +L I
Sbjct: 94 IMEYLPYGSLRDYLQAHAERIDHIKLL---QYTSQICKGMEYLGTKR--YIHRDLATRNI 148
Query: 124 FIQHNGLVKIGCDTYTHTIENKKYLSATRQTYGRPI 159
+++ VKIG T + K ++ PI
Sbjct: 149 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 19 RKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78
R+ ++E+ I++ E + +L HP +V+ + ++ + +TE+M G L +L
Sbjct: 41 REGAMSEEDFIEEA-EVMMKLSHPKLVQLY----GVCLEQAPICLVTEFMEHGCLSDYL- 94
Query: 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTY 138
RT+R + C + ++YL +IH +L + N ++K+
Sbjct: 95 RTQRGL--FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 139 THTIENKKYLSAT 151
T + + +Y S+T
Sbjct: 151 TRFVLDDQYTSST 163
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 36 LTQLEHPNIVKFHRY--WTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWK 93
L ++ HP+IV+ + TD H D P + EY+ Q LKR+K +KLP++
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGD-PVGYIVMEYVGG----QSLKRSKG--QKLPVAEAI 185
Query: 94 RWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGL 130
+ +IL ALSYLHS +++ +L + I + L
Sbjct: 186 AYLLEILPALSYLHSIG--LVYNDLKPENIMLTEEQL 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 169 YTA--RQGAKFPI 179
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 58 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 109
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 146
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILIGELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLR 103
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 104 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 160 YTA--RQGAKFPI 170
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLR 105
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 106 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 162 YTA--RQGAKFPI 172
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 20 KNFKAQEEKIQQVFEN---LTQLEHPNIVKFHRYWTDTHN--------DKPRVIFI-TEY 67
K + EEK+ + L L H +V+++ W + N K +FI EY
Sbjct: 37 KKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEY 96
Query: 68 MSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH 127
+ +L + N ++ + R QIL ALSY+HS IIH +L IFI
Sbjct: 97 CENRTLYDLIHSENLNQQR---DEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDE 151
Query: 128 NGLVKIG 134
+ VKIG
Sbjct: 152 SRNVKIG 158
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLR 101
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 102 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
Query: 147 YLSATRQTYGRPI 159
Y RQ PI
Sbjct: 158 Y--TARQGAKFPI 168
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 58 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 109
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 146
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKFS--- 487
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + VK+G + +E+
Sbjct: 488 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 545
Query: 147 YLSATR 152
Y A++
Sbjct: 546 YYKASK 551
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPR 60
MD G EV ++ ++ + +I + EN ++PNIV + D++
Sbjct: 41 MDVATGQEVAIRQMNLQQQPKKELIINEILVMREN----KNPNIVNY----LDSYLVGDE 92
Query: 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTC 120
+ + EY++ GSL + T + ++ C + L AL +LHS +IH N+
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLHSNQ--VIHRNIKS 145
Query: 121 DTIFIQHNGLVKI 133
D I + +G VK+
Sbjct: 146 DNILLGMDGSVKL 158
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLR 278
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 279 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 335 YTA--RQGAKFPI 345
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLR 278
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 279 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 335 YTA--RQGAKFPI 345
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E I++ L +++HPN++ H + + +K VI I E ++ G L FL +
Sbjct: 59 EDIEREVSILKEIQHPNVITLH----EVYENKTDVILILELVAGGELFDFLAEK----ES 110
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
L + QIL+ + YLHS I H +L + I +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++S LK+F+ + + +PL K +
Sbjct: 57 LKELNHPNIVKL----LDVIHTENKLYLVFEFLSM-DLKKFMDASA--LTGIPLPLIKSY 109
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + + I G +K+
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLA 146
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++S LK+F+ + + +PL K +
Sbjct: 59 LKELNHPNIVKL----LDVIHTENKLYLVFEFLSM-DLKKFMDASA--LTGIPLPLIKSY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + + I G +K+
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLA 148
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 19 RKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78
R+ ++E+ I++ E + +L HP +V+ + ++ + + E+M G L +L
Sbjct: 40 REGAMSEEDFIEEA-EVMMKLSHPKLVQLY----GVCLEQAPICLVFEFMEHGCLSDYL- 93
Query: 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTY 138
RT+R + C + ++YL S +IH +L + N ++K+
Sbjct: 94 RTQRGL--FAAETLLGMCLDVCEGMAYLEEAS--VIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 139 THTIENKKYLSAT 151
T + + +Y S+T
Sbjct: 150 TRFVLDDQYTSST 162
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 30 QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPL 89
+Q + L L H +I+K+ D + + EY+ GSL+ +L R + +L L
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDA--GAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 138
Query: 90 SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
A QI ++YLH+ IH +L + + ++ LVKIG
Sbjct: 139 FA-----QQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIG 176
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLR 361
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 362 LP--QLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 418 YTA--RQGAKFPI 428
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKFS--- 107
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + VK+G + +E+
Sbjct: 108 LDLASLILYAYQLSTALAYLE--SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 165
Query: 147 YLSATR 152
Y A++
Sbjct: 166 YYKASK 171
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 55 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 109
Query: 77 L--KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L TK +KKL A Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 110 LHASETKFEMKKLIDIA-----RQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIG 162
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVI 62
TE+G + V E+ S R + K +EE ++V L ++HPNIV++ + + + +
Sbjct: 46 TEDGRQYVIKEINIS-RMSSKEREESRREV-AVLANMKHPNIVQYRESFEENGS----LY 99
Query: 63 FITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR---WCSQILSALSYLHSCSPPIIHGNLT 119
+ +Y G L KR N +K L + W QI AL ++H I+H ++
Sbjct: 100 IVMDYCEGGDL---FKRI--NAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIK 152
Query: 120 CDTIFIQHNGLVKIG 134
IF+ +G V++G
Sbjct: 153 SQNIFLTKDGTVQLG 167
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLR 279
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 280 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNE 335
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 336 YTA--RQGAKFPI 346
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 43 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 97
Query: 77 L--KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L TK +KKL A Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 98 LHASETKFEMKKLIDIA-----RQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIG 150
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + ++ H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYA----VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 169 YTA--RQGAKFPI 179
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 270 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYM 323
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH NL + N LVK+ DTYT
Sbjct: 324 ATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
EK Q + Q +HP+IVK T+ V I E + G L+ FL+ K +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKFS--- 107
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
L L++ + Q+ +AL+YL S +H ++ + + N VK+G + +E+
Sbjct: 108 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Query: 147 YLSATR 152
A++
Sbjct: 166 XXKASK 171
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 29/166 (17%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND-----------KPRVIFI-TEY 67
K K EK ++ + L +L+H NIV ++ W D K + +FI E+
Sbjct: 42 KRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEF 101
Query: 68 MSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH 127
G+L+Q+++ KR +KL QI + Y+H S +I+ +L IF+
Sbjct: 102 CDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVD 157
Query: 128 NGLVKIGCDTYTHTIENK----------KYLSA---TRQTYGRPIS 160
VKIG +++N +Y+S + Q YG+ +
Sbjct: 158 TKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVD 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + T+ N +++ C +L ALSYLH+ +IH ++ D+I
Sbjct: 120 VMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQG--VIHRDIKSDSI 172
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ +G +K+ C + + +K L T
Sbjct: 173 LLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGT 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
++ L HPNIVK + HN PR++ E++ G L L +K S R
Sbjct: 77 MSNLNHPNIVKLYGL---MHN-PPRMVM--EFVPCGDLYHRLLDKAHPIK---WSVKLRL 127
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
I + Y+ + +PPI+H +L IF+Q
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
++ L HPNIVK + HN PR++ E++ G L L +K S R
Sbjct: 77 MSNLNHPNIVKLYGL---MHN-PPRMVM--EFVPCGDLYHRLLDKAHPIK---WSVKLRL 127
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
I + Y+ + +PPI+H +L IF+Q
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 267 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 320
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH NL + N LVK+ DTYT
Sbjct: 321 ATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
++ L HPNIVK + HN PR++ E++ G L L +K S R
Sbjct: 77 MSNLNHPNIVKLYGL---MHN-PPRMVM--EFVPCGDLYHRLLDKAHPIK---WSVKLRL 127
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
I + Y+ + +PPI+H +L IF+Q
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ 158
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++S LK F+ + + +PL K +
Sbjct: 58 LKELNHPNIVKL----LDVIHTENKLYLVFEFLSM-DLKDFMDASA--LTGIPLPLIKSY 110
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 147
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++S LK F+ + + +PL K +
Sbjct: 59 LKELNHPNIVKL----LDVIHTENKLYLVFEFLSM-DLKDFMDASA--LTGIPLPLIKSY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 148
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L LS+ HS ++H +L + I G +K+ TYTH +
Sbjct: 109 LFQLLQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 309 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 362
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH NL + N LVK+ DTYT
Sbjct: 363 ATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYM+ GSL FLK +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLR 109
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 110 LPQLV--DMSAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 166 YTA--RQGAKFPI 176
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + + EYMS GSL FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y RQ PI
Sbjct: 169 Y--TARQGAKFPI 179
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 17 SERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQ 75
+ KN + E+I L L+HPNI+K D DK +TE+ G L +Q
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF----DVFEDKKYFYLVTEFYEGGELFEQ 136
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKI 133
+ R K QILS + YLH I+H ++ + I +++ N L+ I
Sbjct: 137 IINR-----HKFDECDAANIMKQILSGICYLH--KHNIVHRDIKPENILLENKNSLLNI 188
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS G L FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 169 YTA--RQGAKFPI 179
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ E++ G+L + + + N +++ C +L AL+YLH+ +IH ++ D+I
Sbjct: 120 LMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQG--VIHRDIKSDSI 172
Query: 124 FIQHNGLVKIG----CDTYTHTIENKKYLSAT 151
+ +G VK+ C + + +K L T
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKXLVGT 204
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79
K E++ Q + + +L HP +VKF+ + + + +TEY+S+G L +L
Sbjct: 41 KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP----IYIVTEYISNGCLLNYL-- 94
Query: 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139
+ + K L S C + +++L S IH +L + + VK+ T
Sbjct: 95 -RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMT 151
Query: 140 HTIENKKYLSAT 151
+ + +Y+S+
Sbjct: 152 RYVLDDQYVSSV 163
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPN++ T + V+ ITE+M +GSL FL++ + L R
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTP----VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR- 142
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I + + YL + +H +L I + N + K+ + +E+ + TY
Sbjct: 143 --GIAAGMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLED----DTSDPTY 194
Query: 156 GRPISGQYEI 165
+ G+ I
Sbjct: 195 TSALGGKIPI 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 20 KNFKAQEEKIQQVF----ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
K K E +Q F E LT L+H +IV+F T+ +P ++ + EYM G L +
Sbjct: 77 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE---GRP-LLMVFEYMRHGDLNR 132
Query: 76 FLKRTKRNVKKL---------PLSAWKRW--CSQILSALSYLHSCSPPIIHGNLTCDTIF 124
FL+ + K L PL + SQ+ + + YL +H +L
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCL 190
Query: 125 IQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
+ +VKIG + I + Y +T
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 28 KIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87
KI++ +NL HP+I+K ++ + T D + EY+S G L ++ + R V+++
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVIS-TPTD---FFMVMEYVSGGELFDYICKHGR-VEEM 111
Query: 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+R QILSA+ Y H ++H +L + + + + KI ++ + + ++
Sbjct: 112 ---EARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
Query: 148 LSATRQTYGRPISGQYEIVT 167
L R + G P E+++
Sbjct: 167 L---RDSCGSPNYAAPEVIS 183
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + + EYMS GSL FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 169 YTA--RQGAKFPI 179
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFI 64
+G +VW E+ + +A+++ + L +L+HPNIV+++ D N + +
Sbjct: 30 DGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT--LYIV 85
Query: 65 TEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPP---IIHGNLTCD 121
EY G L + + + + L R +Q+ AL H S ++H +L
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 122 TIFIQHNGLVKIG 134
+F+ VK+G
Sbjct: 146 NVFLDGKQNVKLG 158
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFI 64
+G +VW E+ + +A+++ + L +L+HPNIV+++ D N + +
Sbjct: 30 DGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT--LYIV 85
Query: 65 TEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPP---IIHGNLTCD 121
EY G L + + + + L R +Q+ AL H S ++H +L
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 122 TIFIQHNGLVKIG 134
+F+ VK+G
Sbjct: 146 NVFLDGKQNVKLG 158
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 19 RKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78
R+ ++E+ I++ E + +L HP +V+ + ++ + + E+M G L +L
Sbjct: 38 REGAMSEEDFIEEA-EVMMKLSHPKLVQLY----GVCLEQAPICLVFEFMEHGCLSDYL- 91
Query: 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTY 138
RT+R + C + ++YL +IH +L + N ++K+
Sbjct: 92 RTQRGL--FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGM 147
Query: 139 THTIENKKYLSAT 151
T + + +Y S+T
Sbjct: 148 TRFVLDDQYTSST 160
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 19 RKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78
R+ ++E+ I++ E + +L HP +V+ + ++ + + E+M G L +L
Sbjct: 43 REGAMSEEDFIEEA-EVMMKLSHPKLVQLY----GVCLEQAPICLVFEFMEHGCLSDYL- 96
Query: 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTY 138
RT+R + C + ++YL +IH +L + N ++K+
Sbjct: 97 RTQRGL--FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGM 152
Query: 139 THTIENKKYLSAT 151
T + + +Y S+T
Sbjct: 153 TRFVLDDQYTSST 165
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 58 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 110
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + + I G +K+
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLA 147
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+ Q+ + L L IVK+ +P + + EY+ SG L+ FL+R +
Sbjct: 51 QQRDFQREIQILKALHSDFIVKYR--GVSYGPGRPELRLVMEYLPSGCLRDFLQRHR--- 105
Query: 85 KKLPLSAWKRWCSQILSALSYLHS--CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI 142
+L S + SQI + YL S C +H +L I ++ VKI +
Sbjct: 106 ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 161
Query: 143 ENKKYLSATRQTYGRPI 159
K R+ PI
Sbjct: 162 PLDKDXXVVREPGQSPI 178
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 19 RKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78
R+ ++E+ I++ E + +L HP +V+ + ++ + + E+M G L +L
Sbjct: 40 REGAMSEEDFIEEA-EVMMKLSHPKLVQLY----GVCLEQAPICLVFEFMEHGCLSDYL- 93
Query: 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTY 138
RT+R + C + ++YL +IH +L + N ++K+
Sbjct: 94 RTQRGL--FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 139 THTIENKKYLSAT 151
T + + +Y S+T
Sbjct: 150 TRFVLDDQYTSST 162
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 57 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 109
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + + I G +K+
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLA 146
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + + EYMS GSL FLK +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLR 278
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 279 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 335 YTA--RQGAKFPI 345
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 20 KNFKAQEEKIQQVFE--NLTQ-LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
K K +Q E NL + L+H +V+ + T ++P + ITEYM+ GSL F
Sbjct: 43 KTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT---REEP-IYIITEYMAKGSLLDF 98
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
LK + K+ L + +QI ++Y+ + IH +L + + + + KI
Sbjct: 99 LKSDEGG--KVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADF 154
Query: 137 TYTHTIENKKYLS 149
IE+ +Y +
Sbjct: 155 GLARVIEDNEYTA 167
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 20 KNFKAQEEKIQQVF----ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
K K E +Q F E LT L+H +IV+F T+ +P ++ + EYM G L +
Sbjct: 54 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE---GRP-LLMVFEYMRHGDLNR 109
Query: 76 FLKRTKRNVKKL---------PLSAWKRW--CSQILSALSYLHSCSPPIIHGNLTCDTIF 124
FL+ + K L PL + SQ+ + + YL +H +L
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCL 167
Query: 125 IQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
+ +VKIG + I + Y +T
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFI 64
+G +VW E+ + +A+++ + L +L+HPNIV+++ D N + +
Sbjct: 30 DGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT--LYIV 85
Query: 65 TEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPP---IIHGNLTCD 121
EY G L + + + + L R +Q+ AL H S ++H +L
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 122 TIFIQHNGLVKIG 134
+F+ VK+G
Sbjct: 146 NVFLDGKQNVKLG 158
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 63 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 115
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 116 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 20 KNFKAQEEKIQQVF----ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
K K E +Q F E LT L+H +IV+F T+ +P ++ + EYM G L +
Sbjct: 48 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE---GRP-LLMVFEYMRHGDLNR 103
Query: 76 FLKRTKRNVKKL---------PLSAWKRW--CSQILSALSYLHSCSPPIIHGNLTCDTIF 124
FL+ + K L PL + SQ+ + + YL +H +L
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCL 161
Query: 125 IQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
+ +VKIG + I + Y +T
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 60 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 112
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 113 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 168
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T P++ +T++ SL
Sbjct: 55 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----APQLAIVTQWCEGSSLYHH 109
Query: 77 L--KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L TK +KKL A Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 110 LHASETKFEMKKLIDIA-----RQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIG 162
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 57 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 109
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 165
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 25/129 (19%)
Query: 21 NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80
N + EK+ + + L +LEHP IV++ W + + TE + S K +L
Sbjct: 42 NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNT--------TEKLQPSSPKVYLYIQ 93
Query: 81 KRNVKKLPLSAWKRW-CS--------------QILSALSYLHSCSPPIIHGNLTCDTIFI 125
+ +K L W C+ QI A+ +LHS ++H +L IF
Sbjct: 94 MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFF 151
Query: 126 QHNGLVKIG 134
+ +VK+G
Sbjct: 152 TMDDVVKVG 160
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 55 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYMS GSL FLK +
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLR 102
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 103 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 158
Query: 147 YLSATRQTYGRPI 159
RQ PI
Sbjct: 159 --XTARQGAKFPI 169
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 55 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 55 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 63 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 115
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 116 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKDFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + + I G +K+
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLA 145
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 67 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 121
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 174
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 28 KIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87
KI++ +NL HP+I+K ++ + T D + EY+S G L ++ + R V+++
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVIS-TPTD---FFMVMEYVSGGELFDYICKHGR-VEEM 111
Query: 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+R QILSA+ Y H ++H +L + + + + KI ++ + + ++
Sbjct: 112 ---EARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
Query: 148 LSATRQTYGRPISGQYEIVT 167
L R + G P E+++
Sbjct: 167 L---RTSCGSPNYAAPEVIS 183
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 67 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 121
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 174
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +HPNIVK + +N + + E+ + G++ + +R + + S +
Sbjct: 88 LASCDHPNIVKLLDAFYYENN----LWILIEFCAGGAVDAVMLELERPLTE---SQIQVV 140
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
C Q L AL+YLH IIH +L I +G +K+
Sbjct: 141 CKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLA 177
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 59 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 113
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 114 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 166
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 63 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 117 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 66 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 120
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 121 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 173
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +HPNIVK + +N + + E+ + G++ + +R + + S +
Sbjct: 88 LASCDHPNIVKLLDAFYYENN----LWILIEFCAGGAVDAVMLELERPLTE---SQIQVV 140
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
C Q L AL+YLH IIH +L I +G +K+
Sbjct: 141 CKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLA 177
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 68 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYM 121
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 122 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +HPNIVK + +N + + E+ + G++ + +R + + S +
Sbjct: 88 LASCDHPNIVKLLDAFYYENN----LWILIEFCAGGAVDAVMLELERPLTE---SQIQVV 140
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
C Q L AL+YLH IIH +L I +G +K+
Sbjct: 141 CKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLA 177
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 63 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 117 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 34 ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV--------- 84
E LT L+H +IVKF Y D +I + EYM G L +FL+ +
Sbjct: 67 ELLTNLQHEHIVKF--YGVCVEGDP--LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+L S QI + + YL S +H +L + N LVKIG
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIG 170
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 14 VQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGS 72
V++ ER A +E +Q+ N L HPNIV+F T TH + I EY S G
Sbjct: 50 VKYIERG--AAIDENVQREIINHRSLRHPNIVRFKEVILTPTH-----LAIIMEYASGGE 102
Query: 73 LKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS 108
L + + N + + + Q+LS +SY HS
Sbjct: 103 LYERIC----NAGRFSEDEARFFFQQLLSGVSYCHS 134
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 44 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 98
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 99 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 151
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTK 81
K +E + + + L QL+HPNI+K + ++ DK + E + G L + + R
Sbjct: 91 KTDKESLLREVQLLKQLDHPNIMKLYEFF----EDKGYFYLVGEVYTGGELFDEIISR-- 144
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
K+ R Q+LS ++Y+H I+H +L + + ++
Sbjct: 145 ---KRFSEVDAARIIRQVLSGITYMH--KNKIVHRDLKPENLLLE 184
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTK 81
K +E + + + L QL+HPNI+K + ++ DK + E + G L + + R
Sbjct: 90 KTDKESLLREVQLLKQLDHPNIMKLYEFF----EDKGYFYLVGEVYTGGELFDEIISR-- 143
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
K+ R Q+LS ++Y+H I+H +L + + ++
Sbjct: 144 ---KRFSEVDAARIIRQVLSGITYMH--KNKIVHRDLKPENLLLE 183
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 44 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 98
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 99 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 151
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPN+V T KP V+ + E+M +G+L FL++ + L R
Sbjct: 98 MGQFDHPNVVHLEGVVT---RGKP-VMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR- 152
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
I + + YL +H +L I + N + K+ + IE+
Sbjct: 153 --GIAAGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 145
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 41 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 95
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 96 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 148
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ L+H +VK H T K + ITE+M+ GSL FLK + + K PL +
Sbjct: 231 MKTLQHDKLVKLHAVVT-----KEPIYIITEFMAKGSLLDFLKSDEGS--KQPLPKLIDF 283
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+QI ++++ + IH +L I + + + KI
Sbjct: 284 SAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIA 320
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 39 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 93
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 94 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 146
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 55 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 144
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 59 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 148
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 58 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 110
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 147
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 145
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T KP++ +T++ SL
Sbjct: 39 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHH 93
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 94 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 146
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 58 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 110
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 147
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 61 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+QI SA+ YL + IH +L + N LVK+
Sbjct: 115 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVA 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 145
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 57 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 109
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 146
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTK 81
K +E + + + L QL+HPNI+K + ++ DK + E + G L + + R
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIMKLYEFF----EDKGYFYLVGEVYTGGELFDEIISR-- 120
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
K+ R Q+LS ++Y+H I+H +L + + ++
Sbjct: 121 ---KRFSEVDAARIIRQVLSGITYMH--KNKIVHRDLKPENLLLE 160
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 64 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 117
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
+QI SA+ YL + IH +L + N LVK+ + + T TY
Sbjct: 118 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLM--------TGDTY 167
Query: 156 GRPISGQYEI 165
P ++ I
Sbjct: 168 TAPAGAKFPI 177
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 59 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 148
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 61 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+QI SA+ YL + IH +L + N LVK+
Sbjct: 115 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVA 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 57 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 109
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 146
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 55 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 144
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 56 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 108
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 145
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +HPNIVK + +N + + E+ + G++ + +R + + S +
Sbjct: 61 LASCDHPNIVKLLDAFYYENN----LWILIEFCAGGAVDAVMLELERPLTE---SQIQVV 113
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
C Q L AL+YLH IIH +L I +G +K+
Sbjct: 114 CKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLA 150
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 76 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 129
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 130 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 65 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 118
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
+QI SA+ YL + IH +L + N LVK+ + + T TY
Sbjct: 119 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLM--------TGDTY 168
Query: 156 GRPISGQYEI 165
P ++ I
Sbjct: 169 TAPAGAKFPI 178
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 60 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKKFMDASA--LTGIPLPLIKSY 112
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 113 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 149
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+TQL H N+V+ + +K + +TEYM+ GSL +L+ R+V L ++
Sbjct: 68 MTQLRHSNLVQLLGVIVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKF 122
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ A+ YL + +H +L + + + + K+
Sbjct: 123 SLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKV 158
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 68 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 121
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 122 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+TQL H N+V+ + +K + +TEYM+ GSL +L+ R+V L ++
Sbjct: 240 MTQLRHSNLVQLLGVIVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKF 294
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ A+ YL + +H +L + + + + K+
Sbjct: 295 SLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKV 330
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P ITE+M+ G+L +L+ R +++
Sbjct: 65 MKEIKHPNLVQLLGVCTR----EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 118
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 119 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 65 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 118
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 119 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 39 LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQ 98
L P IV + + P V E + GSL Q +K+ + LP + Q
Sbjct: 121 LSSPRIVPLY----GAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQ 172
Query: 99 ILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI 142
L L YLH+ I+HG++ D + + +G CD + H +
Sbjct: 173 ALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCD-FGHAL 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 20 KNFKAQEEKIQQVFE--NLTQ-LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
K K +Q E NL + L+H +V+ + T ++P + ITE+M+ GSL F
Sbjct: 42 KTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT---KEEP-IYIITEFMAKGSLLDF 97
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
LK + K+ L + +QI ++Y+ + IH +L + + + + KI
Sbjct: 98 LKSDEGG--KVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADF 153
Query: 137 TYTHTIENKKY 147
IE+ +Y
Sbjct: 154 GLARVIEDNEY 164
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FK+Q EK +++ E + L HPNI++ + Y+ +D+ R+ + E+ G L +
Sbjct: 49 FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF----HDRKRIYLMLEFAPRGELYK 104
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ R ++ + + ++ AL Y H +IH ++ + + + + G +KI
Sbjct: 105 ELQKHGRFDEQRSAT----FMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIA 157
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 39 LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQ 98
L P IV + + P V E + GSL Q +K+ + LP + Q
Sbjct: 123 LSSPRIVPLY----GAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQ 174
Query: 99 ILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI 142
L L YLH+ I+HG++ D + + +G CD + H +
Sbjct: 175 ALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCD-FGHAL 215
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 67 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 120
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 121 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 68 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 121
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 122 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FK+Q EK +++ E + L HPNI++ + Y+ +D+ R+ + E+ G L +
Sbjct: 48 FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF----HDRKRIYLMLEFAPRGELYK 103
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ R ++ + + ++ AL Y H +IH ++ + + + + G +KI
Sbjct: 104 ELQKHGRFDEQRSAT----FMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIA 156
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPN++ T + V+ ITE+M +GSL FL++ + L R
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTP----VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR- 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I + + YL + +H L I + N + K+ + +E+ + TY
Sbjct: 117 --GIAAGMKYLADMN--YVHRALAARNILVNSNLVCKVSDFGLSRFLED----DTSDPTY 168
Query: 156 GRPISGQYEI 165
+ G+ I
Sbjct: 169 TSALGGKIPI 178
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75
FK+Q EK +++ E + L HPNI++ + Y+ +D+ R+ + E+ G L +
Sbjct: 48 FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF----HDRKRIYLMLEFAPRGELYK 103
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L++ R ++ + + ++ AL Y H +IH ++ + + + + G +KI
Sbjct: 104 ELQKHGRFDEQRSAT----FMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIA 156
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 39 LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQ 98
L P IV + + P V E + GSL Q +K+ + LP + Q
Sbjct: 107 LSSPRIVPLY----GAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQ 158
Query: 99 ILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI 142
L L YLH+ I+HG++ D + + +G CD + H +
Sbjct: 159 ALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCD-FGHAL 199
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 63 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 117 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 63 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 117 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 29/140 (20%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWT------DTHND---------------- 57
+ K EK ++ + L +L+H NIV ++ W +T +D
Sbjct: 43 RRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSS 102
Query: 58 --KPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPII 114
K + +FI E+ G+L+Q+++ KR +KL QI + Y+H S +I
Sbjct: 103 RSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGVDYIH--SKKLI 158
Query: 115 HGNLTCDTIFIQHNGLVKIG 134
H +L IF+ VKIG
Sbjct: 159 HRDLKPSNIFLVDTKQVKIG 178
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+TQL H N+V+ + +K + +TEYM+ GSL +L+ R+V L ++
Sbjct: 59 MTQLRHSNLVQLLGVIVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKF 113
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ A+ YL + +H +L + + + + K+
Sbjct: 114 SLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKV 149
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 23 KAQEEKIQQVFEN---LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79
K EK Q + + L +L HPN +++ + H + EY GS L+
Sbjct: 92 KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT----AWLVMEY-CLGSASDLLEV 146
Query: 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K+ ++++ ++A L L+YLHS + +IH ++ I + GLVK+G
Sbjct: 147 HKKPLQEVEIAAVTHGA---LQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLG 196
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + +TEYM+ GSL FLK +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLR 109
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 110 LPQLV--DMSAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
Query: 147 YLSATRQTYGRPI 159
+ + RQ PI
Sbjct: 166 WTA--RQGAKFPI 176
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+TQL H N+V+ + +K + +TEYM+ GSL +L+ R+V L ++
Sbjct: 53 MTQLRHSNLVQLLGVIVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKF 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
+ A+ YL + +H +L + + + + K+
Sbjct: 108 SLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKV 143
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P ITE+M+ G+L +L+ R +++
Sbjct: 68 MKEIKHPNLVQL----LGVCTREPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYM 121
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+QI SA+ YL + IH +L + N LVK+
Sbjct: 122 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVA 158
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + + EYMS G L FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
Y + RQ PI
Sbjct: 169 YTA--RQGAKFPI 179
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK F+ + + +PL K +
Sbjct: 59 LKELNHPNIVKL----LDVIHTENKLYLVFEFLHQ-DLKTFMDASA--LTGIPLPLIKSY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 148
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 23 KAQEEKIQQVFEN---LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79
K EK Q + + L +L HPN +++ + H + EY GS L+
Sbjct: 53 KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT----AWLVMEY-CLGSASDLLEV 107
Query: 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K+ ++++ ++A L L+YLHS + +IH ++ I + GLVK+G
Sbjct: 108 HKKPLQEVEIAAVTHGA---LQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLG 157
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTK 81
K +E + + + L QL+HPNI+K + ++ DK + E + G L + + R
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYEFF----EDKGYFYLVGEVYTGGELFDEIISR-- 126
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
K+ R Q+LS ++Y+H I+H +L + + ++
Sbjct: 127 ---KRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLE 166
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK+F+ + + +PL K +
Sbjct: 59 LKELNHPNIVKL----LDVIHTENKLYLVFEHVDQ-DLKKFMDASA--LTGIPLPLIKSY 111
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L++ HS ++H +L + I G +K+
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLA 148
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 57 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL---E 108
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
C + A+ YL S +H +L + G+VK+ + + + +Y S+
Sbjct: 109 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 166
Query: 155 Y 155
+
Sbjct: 167 F 167
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 53 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL---E 104
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSAT 151
C + A+ YL S +H +L + G+VK+ + + + +Y S+
Sbjct: 105 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 22 FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
F+A+E L P IV + + P V E + GSL Q +K
Sbjct: 112 FRAEE------LMACAGLTSPRIVPLY----GAVREGPWVNIFMELLEGGSLGQLVKEQG 161
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141
LP + Q L L YLHS I+HG++ D + + +G CD + H
Sbjct: 162 ----CLPEDRALYYLGQALEGLEYLHSRR--ILHGDVKADNVLLSSDGSHAALCD-FGHA 214
Query: 142 I 142
+
Sbjct: 215 V 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 58 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 110
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+QI ++++ + IH NL I + KI IE+ +Y
Sbjct: 111 AAQIAEGMAFIEERN--YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY 160
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 58 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL---E 109
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
C + A+ YL S +H +L + G+VK+ + + + +Y S+
Sbjct: 110 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 167
Query: 155 Y 155
+
Sbjct: 168 F 168
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +L+H +V+ + +++P + +TEYM+ GSL FLK + KLP
Sbjct: 58 MKKLKHDKLVQLYA----VVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDM 110
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
+Q+ + ++Y+ + IH +L I + + + KI IE+ + RQ
Sbjct: 111 AAQVAAGMAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNE--XTARQGA 166
Query: 156 GRPI 159
PI
Sbjct: 167 KFPI 170
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 64 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LE 115
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
C + A+ YL S +H +L + G+VK+ + + + +Y S+
Sbjct: 116 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 173
Query: 155 Y 155
+
Sbjct: 174 F 174
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 22 FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
F+A+E L P IV + + P V E + GSL Q +K
Sbjct: 131 FRAEE------LMACAGLTSPRIVPLY----GAVREGPWVNIFMELLEGGSLGQLVKEQG 180
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141
LP + Q L L YLHS I+HG++ D + + +G CD + H
Sbjct: 181 ----CLPEDRALYYLGQALEGLEYLHSRR--ILHGDVKADNVLLSSDGSHAALCD-FGHA 233
Query: 142 I 142
+
Sbjct: 234 V 234
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 58 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL---E 109
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
C + A+ YL S +H +L + G+VK+ + + + +Y S+
Sbjct: 110 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 73 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LE 124
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQT 154
C + A+ YL S +H +L + G+VK+ + + + +Y S+
Sbjct: 125 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182
Query: 155 Y 155
+
Sbjct: 183 F 183
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E + EN L HP + +Y TH+ R+ F+ EY + G L F ++
Sbjct: 48 AKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHD---RLCFVMEYANGGEL--FFHLSR 101
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
V + + ++I+SAL YLHS +++ +L + + + +G +KI
Sbjct: 102 ERV--FSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKI 150
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Query: 12 NEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSG 71
++V K E+ + E + +L HP +V+ + ++ + + E+M G
Sbjct: 52 DKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLY----GVCLEQAPICLVFEFMEHG 107
Query: 72 SLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLV 131
L +L RT+R + C + ++YL +IH +L + N ++
Sbjct: 108 CLSDYL-RTQRGL--FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVI 162
Query: 132 KIGCDTYTHTIENKKYLSAT 151
K+ T + + +Y S+T
Sbjct: 163 KVSDFGMTRFVLDDQYTSST 182
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E + EN L HP + +Y TH+ R+ F+ EY + G L F ++
Sbjct: 50 AKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHD---RLCFVMEYANGGEL--FFHLSR 103
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
V + + ++I+SAL YLHS +++ +L + + + +G +KI
Sbjct: 104 ERV--FSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKI 152
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E + EN L HP + +Y TH+ R+ F+ EY + G L F ++
Sbjct: 49 AKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHD---RLCFVMEYANGGEL--FFHLSR 102
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
V + + ++I+SAL YLHS +++ +L + + + +G +KI
Sbjct: 103 ERV--FSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKI 151
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E + EN L HP + +Y TH+ R+ F+ EY + G L F ++
Sbjct: 191 AKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHD---RLCFVMEYANGGEL--FFHLSR 244
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
V + + ++I+SAL YLHS +++ +L + + + +G +KI
Sbjct: 245 ERV--FSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKI 293
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E + EN L HP + +Y TH+ R+ F+ EY + G L F ++
Sbjct: 188 AKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHD---RLCFVMEYANGGEL--FFHLSR 241
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
V + + ++I+SAL YLHS +++ +L + + + +G +KI
Sbjct: 242 ERV--FSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKI 290
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
E Q + + +L H +V+ + +++P + + EYMS GSL FLK +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYA----VVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLR 112
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
LP +QI S ++Y+ + +H +L I + N + K+ IE+ +
Sbjct: 113 LPQLV--DMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 147 YLSATRQTYGRPI 159
RQ PI
Sbjct: 169 --XTARQGAKFPI 179
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P I E+M+ G+L +L+ R +++
Sbjct: 63 MKEIKHPNLVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 117 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P I E+M+ G+L +L+ R +++
Sbjct: 63 MKEIKHPNLVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 117 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 21 NFKAQEEKIQQVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
N A + Q F+N L + H NI+ F Y T P++ +T++ SL
Sbjct: 39 NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----APQLAIVTQWCEGSSLYHH 93
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L + + + L R +Q + YLH+ S IIH +L + IF+ + VKIG
Sbjct: 94 LHIIETKFEMIKLIDIARQTAQ---GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIG 146
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + +TEYM +GSL FL+ + L R
Sbjct: 104 MGQFDHPNIIRLEGVVTRGR----LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 96 CS---QILSALSYLH---SCSPPIIHGNLTC 120
+ LS L Y+H + ++ NL C
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVC 190
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q +HPNI++ T + +TEYM +GSL FL+ + L R
Sbjct: 104 MGQFDHPNIIRLEGVVTRGR----LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 96 CS---QILSALSYLH---SCSPPIIHGNLTC 120
+ LS L Y+H + ++ NL C
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVC 190
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L HPNIVK D + + ++ + E++ LK F+ + + +PL K +
Sbjct: 55 LKELNHPNIVKL----LDVIHTENKLYLVFEHVHQ-DLKTFMDASA--LTGIPLPLIKSY 107
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG-----------CDTYTHTI 142
Q+L L++ HS ++H +L + I G +K+ TYTH +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 45 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 100
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 101 VFTEE----RARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 146
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 50 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 105
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 106 VFTEERA----RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 151
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 48 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 103
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 104 VFTEE----RARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 149
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 45 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 100
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 101 VFTEE----RARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 146
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 45 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 100
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 101 VFTEERA----RFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 146
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 45 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 100
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 101 VFTEE----RARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 146
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P I E+M+ G+L +L+ R +++
Sbjct: 61 MKEIKHPNLVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+QI SA+ YL + IH +L + N LVK+
Sbjct: 115 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVA 151
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 24 AQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
A++E V E+ L HP + +Y TH+ R+ F+ EY + G L L R +
Sbjct: 45 AKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHD---RLCFVMEYANGGELFFHLSRER 100
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
++ + + ++I+SAL YLHS +++ ++ + + + +G +KI
Sbjct: 101 VFTEE----RARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKI 146
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ Q H NI++ + KP +I ITEYM +G+L +FL+ L L R
Sbjct: 100 MGQFSHHNIIRLEGVISKY---KPMMI-ITEYMENGALDKFLREKDGEFSVLQLVGMLR- 154
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTY 155
I + + YL + + +H +L I + N + K+ + +E+ AT T
Sbjct: 155 --GIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP--EATYTTS 208
Query: 156 GRPI 159
G I
Sbjct: 209 GGKI 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTKRNVKKLPLSAWKR 94
L L+HPNI+K + ++ D N + E G L + + R K N +
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRN----YYLVMECYKGGELFDEIIHRMKFNEVDAAV----- 140
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFI---QHNGLVKIGCDTYTHTIENKKYL 148
Q+LS ++YLH + I+H +L + + + + + L+KI + EN+K +
Sbjct: 141 IIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM 195
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTK 81
K +E + + + L QL+HPNI K + ++ DK + E + G L + + R
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIXKLYEFF----EDKGYFYLVGEVYTGGELFDEIISR-- 120
Query: 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
K+ R Q+LS ++Y H I+H +L + + ++
Sbjct: 121 ---KRFSEVDAARIIRQVLSGITYXH--KNKIVHRDLKPENLLLE 160
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 32 VFENLTQLEHPNIVKFHRYWTDTHNDKP-RVIFITEYMSSGSLKQFLKRTKRNVKKLPLS 90
V +L EHPN+V+ T + D+ ++ + E++ L +L + +P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE--PGVPTE 120
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K Q+L L +LHS ++H +L I + +G +K+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLA 162
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 57 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 109
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+QI ++++ + IH +L I + KI IE+ +Y
Sbjct: 110 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 159
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P I E+M+ G+L +L+ R +++
Sbjct: 68 MKEIKHPNLVQL----LGVCTREPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYM 121
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N LVK+ DTYT
Sbjct: 122 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFI-TEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
+ L H +V+ + T K R IFI TEYM++G L +L+ + + L
Sbjct: 73 MMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LE 124
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
C + A+ YL S +H +L + G+VK+
Sbjct: 125 MCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKV 161
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ +P +TEYM G+L +L+ R +++
Sbjct: 82 MKEIKHPNLVQL----LGVCTLEPPFYIVTEYMPYGNLLDYLRECNR--EEVTAVVLLYM 135
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG---------CDTYT 139
+QI SA+ YL + IH +L + N +VK+ DTYT
Sbjct: 136 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ +++HPN+V+ T +P I E+M+ G+L +L+ R +++
Sbjct: 64 MKEIKHPNLVQLLGVCTR----EPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYM 117
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+QI SA+ YL + IH +L + N LVK+
Sbjct: 118 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVA 154
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 29 IQQVFEN---LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85
I+QV++ L +L+HPN+VK D + D ++F E ++ G + + +K
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVF--ELVNQGPVMEV-----PTLK 132
Query: 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENK 145
L + + ++ + YLH IIH ++ + + +G +KI + + E K
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIA--DFGVSNEFK 188
Query: 146 KYLSATRQTYGRPISGQYEIVTKTNNV 172
+ T G P E +++T +
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKI 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 32 VFENLTQLEHPNIVKFHRYWTDTHNDKP-RVIFITEYMSSGSLKQFLKRTKRNVKKLPLS 90
V +L EHPN+V+ T + D+ ++ + E++ L +L + +P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE--PGVPTE 120
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K Q+L L +LHS ++H +L I + +G +K+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLA 162
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 32 VFENLTQLEHPNIVKFHRYWTDTHNDK-PRVIFITEYMSSGSLKQFLKRTKRNVKKLPLS 90
V +L EHPN+V+ T + D+ ++ + E++ L +L + +P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE--PGVPTE 120
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K Q+L L +LHS ++H +L I + +G +K+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLA 162
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 72 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 124
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLS 149
+QI ++++ + IH +L I + KI IE+ +Y +
Sbjct: 125 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 176
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 68 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 120
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLS 149
+QI ++++ + IH +L I + KI IE+ +Y +
Sbjct: 121 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 172
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 67 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 119
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLS 149
+QI ++++ + IH +L I + KI IE+ +Y +
Sbjct: 120 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 171
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKF-HRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
E K+ + E+ I ++ E L +HP IVK Y+ D ++ + E+ G++
Sbjct: 45 ETKSEEELEDYIVEI-EILATCDHPYIVKLLGAYYHDG-----KLWIMIEFCPGGAVDAI 98
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + + + C Q+L AL++LHS IIH +L + + G +++
Sbjct: 99 MLELDRGLTEPQIQVV---CRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLA-- 151
Query: 137 TYTHTIENKKYLSATRQTYGRPISGQYEIV 166
+ + +N K L G P E+V
Sbjct: 152 DFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 181
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKF-HRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
E K+ + E+ I ++ E L +HP IVK Y+ D ++ + E+ G++
Sbjct: 53 ETKSEEELEDYIVEI-EILATCDHPYIVKLLGAYYHDG-----KLWIMIEFCPGGAVDAI 106
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + + + C Q+L AL++LHS IIH +L + + G +++
Sbjct: 107 MLELDRGLTEPQIQVV---CRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLA-- 159
Query: 137 TYTHTIENKKYLSATRQTYGRPISGQYEIV 166
+ + +N K L G P E+V
Sbjct: 160 DFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 189
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 62 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
+QI ++++ + IH +L I + KI IE+ +Y
Sbjct: 115 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWT-DTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83
++ +++V+ + +H ++V++ W D H ++ EY + GSL + R
Sbjct: 54 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRI 108
Query: 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
+ + K Q+ L Y+HS S ++H ++ IFI
Sbjct: 109 MSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWT-DTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83
++ +++V+ + +H ++V++ W D H ++ EY + GSL + R
Sbjct: 50 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRI 104
Query: 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
+ + K Q+ L Y+HS S ++H ++ IFI
Sbjct: 105 MSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWT-DTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83
++ +++V+ + +H ++V++ W D H ++ EY + GSL + R
Sbjct: 52 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRI 106
Query: 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
+ + K Q+ L Y+HS S ++H ++ IFI
Sbjct: 107 MSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFI 146
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+ Q+ + L L IVK+ R++ EY+ SG L+ FL+R +
Sbjct: 54 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM--EYLPSGCLRDFLQRHR--- 108
Query: 85 KKLPLSAWKRWCSQILSALSYLHS--CSPPIIHGNLTCDTIFIQHNGLVKIG 134
+L S + SQI + YL S C +H +L I ++ VKI
Sbjct: 109 ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIA 156
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWT-DTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83
++ +++V+ + +H ++V++ W D H ++ EY + GSL + R
Sbjct: 52 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRI 106
Query: 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI 125
+ + K Q+ L Y+HS S ++H ++ IFI
Sbjct: 107 MSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFI 146
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+ Q+ + L L IVK+ R++ EY+ SG L+ FL+R +
Sbjct: 67 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM--EYLPSGCLRDFLQRHR--- 121
Query: 85 KKLPLSAWKRWCSQILSALSYLHS--CSPPIIHGNLTCDTIFIQHNGLVKIG 134
+L S + SQI + YL S C +H +L I ++ VKI
Sbjct: 122 ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIA 169
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 7 VEVVWNEVQFSERKN-FKAQEEKIQQVFEN--LTQLEHPNIVKFHRYWTDTHNDKPRVIF 63
E V+ V+ ++K K +EEK N L ++HP +V H + ++ F
Sbjct: 61 AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----KLYF 116
Query: 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTI 123
+ +Y++ G L L+R + ++ + + ++I SAL YLHS + I++ +L + I
Sbjct: 117 VLDYINGGELFYHLQRERCFLE----PRARFYAAEIASALGYLHSLN--IVYRDLKPENI 170
Query: 124 FIQHNG 129
+ G
Sbjct: 171 LLDSQG 176
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+ Q+ + L L IVK+ R++ EY+ SG L+ FL+R +
Sbjct: 55 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVM--EYLPSGCLRDFLQRHR--- 109
Query: 85 KKLPLSAWKRWCSQILSALSYLHS--CSPPIIHGNLTCDTIFIQHNGLVKIG 134
+L S + SQI + YL S C +H +L I ++ VKI
Sbjct: 110 ARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIA 157
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 39 LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQ 98
+ H NI+ F ++ IT+Y +GSL +LK T + K + A+
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSS---- 143
Query: 99 ILSALSYLHS------CSPPIIHGNLTCDTIFIQHNG 129
+S L +LH+ P I H +L I ++ NG
Sbjct: 144 -VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 36 LTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
L + P IV F+ +++D + E+M GSL Q LK KR +P +
Sbjct: 68 LHECNSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKEAKR----IPEEILGK 118
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+L L+YL I+H ++ I + G +K+ CD
Sbjct: 119 VSIAVLRGLAYLREKH-QIMHRDVKPSNILVNSRGEIKL-CD 158
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I ++ ++HPN+V ++ + K V + EY+ + +
Sbjct: 76 KRFKNRELQIMRI------VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-----ETV 124
Query: 78 KRTKRNVKKL----PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ-HNGLVK 132
R R+ KL P+ K + Q+L +L+Y+HS I H ++ + + +G++K
Sbjct: 125 YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLK 182
Query: 133 I 133
+
Sbjct: 183 L 183
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 62 IFITEYMSSGSLKQFLKRTKRNVKKLP------LSAWKRWCSQILSALSYLHSCSPPIIH 115
+ + E M+ G LK +L+ + + P L + ++I ++YL++ +H
Sbjct: 97 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVH 154
Query: 116 GNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
NL + H+ VKIG T I Y
Sbjct: 155 RNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 186
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 62 IFITEYMSSGSLKQFLKRTKRNVKKLP------LSAWKRWCSQILSALSYLHSCSPPIIH 115
+ + E M+ G LK +L+ + + P L + ++I ++YL++ +H
Sbjct: 96 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVH 153
Query: 116 GNLTCDTIFIQHNGLVKIGCDTYTHTIENKKY 147
NL + H+ VKIG T I Y
Sbjct: 154 RNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 26/121 (21%)
Query: 33 FENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR---------- 82
F L Q+ HP+++K + D P ++ I EY GSL+ FL+ +++
Sbjct: 77 FNVLKQVNHPHVIKLY---GACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 83 ----------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVK 132
+ + L + + QI + YL S ++H +L I + +K
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRKMK 190
Query: 133 I 133
I
Sbjct: 191 I 191
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTKRNVKKLPLSAWKR 94
L QL+HPNI+K + ++ D N + E G L + + R K + +
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRN----YYLVMEVYRGGELFDEIILRQKFSEVDAAV----- 108
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ---HNGLVKI 133
Q+LS +YLH + I+H +L + + ++ + L+KI
Sbjct: 109 IMKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKI 148
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 20 KNFKAQEEKI---QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
K F +++EK + N L H NI+ F + + ++ IT Y GSL +
Sbjct: 37 KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLH------SCSPPIIHGNLTCDTIFIQHNG 129
L+ T L + R I S L++LH P I H +L I ++ NG
Sbjct: 97 LQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 20 KNFKAQEEKI---QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
K F +++EK + N L H NI+ F + + ++ IT Y GSL +
Sbjct: 66 KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 125
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLH------SCSPPIIHGNLTCDTIFIQHNG 129
L+ T L + R I S L++LH P I H +L I ++ NG
Sbjct: 126 LQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 179
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 20 KNFKAQEEKI---QQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76
K F +++EK + N L H NI+ F + + ++ IT Y GSL +
Sbjct: 37 KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLH------SCSPPIIHGNLTCDTIFIQHNG 129
L+ T L + R I S L++LH P I H +L I ++ NG
Sbjct: 97 LQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q EK+ L H ++V FH ++ D ND V + E SL + KR
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFED--ND--FVFVVLELCRRRSLLELHKRR---- 111
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K L + + QI+ YLH +IH +L +F+ + VKIG
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIG 159
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q EK+ L H ++V FH ++ D ND V + E SL + KR
Sbjct: 58 QREKMSMEISIHRSLAHQHVVGFHGFFED--ND--FVFVVLELCRRRSLLELHKRR---- 109
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K L + + QI+ YLH +IH +L +F+ + VKIG
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIG 157
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q EK+ L H ++V FH ++ D ND V + E SL + KR
Sbjct: 82 QREKMSMEISIHRSLAHQHVVGFHGFFED--ND--FVFVVLELCRRRSLLELHKRR---- 133
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K L + + QI+ YLH +IH +L +F+ + VKIG
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIG 181
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q EK+ L H ++V FH ++ D ND V + E SL + KR
Sbjct: 84 QREKMSMEISIHRSLAHQHVVGFHGFFED--ND--FVFVVLELCRRRSLLELHKRR---- 135
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K L + + QI+ YLH +IH +L +F+ + VKIG
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIG 183
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q EK+ L H ++V FH ++ D ND V + E SL + KR
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFED--ND--FVFVVLELCRRRSLLELHKRR---- 111
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K L + + QI+ YLH +IH +L +F+ + VKIG
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIG 159
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
+ E + Q E ++ H N+++ R + T ++ + + YM++GS+ L+ +R
Sbjct: 76 QGGELQFQTEVEMISMAVHRNLLRL-RGFCMTPTER---LLVYPYMANGSVASCLR--ER 129
Query: 83 NVKKLPLSAWKRWCSQILSA--LSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139
+ PL KR + SA L+YLH C P IIH ++ I + +G
Sbjct: 130 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189
Query: 140 HTIENKK--YLSATRQTYGRPISGQYEIVTKTNNVT 173
++ K A R T G I+ +Y K++ T
Sbjct: 190 KLMDYKDXHVXXAVRGTIGH-IAPEYLSTGKSSEKT 224
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+EK+ L++P++V FH ++ D V + E SL + KR K
Sbjct: 69 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF----VYVVLEICRRRSLLELHKRRKAVT 124
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ + + Q + + YLH+ +IH +L +F+ + VKIG
Sbjct: 125 E----PEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIG 168
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q EK+ L H ++V FH ++ D ND V + E SL + KR
Sbjct: 64 QREKMSMEISIHRSLAHQHVVGFHGFFED--ND--FVFVVLELCRRRSLLELHKRR---- 115
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K L + + QI+ YLH +IH +L +F+ + VKIG
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIG 163
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTKRNVKKLPLSAWKR 94
L QL+HPNI+K + ++ D N + E G L + + R K + +
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRN----YYLVMEVYRGGELFDEIILRQKFSEVDAAV----- 125
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ---HNGLVKI 133
Q+LS +YLH + I+H +L + + ++ + L+KI
Sbjct: 126 IMKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKI 165
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF---ITEYMSSGSLKQF 76
K FK +E +I + +L+H NIV+ RY+ + +K V++ + +Y+ ++ +
Sbjct: 57 KRFKNRELQIMR------KLDHCNIVRL-RYFFYSSGEKKDVVYLNLVLDYVPE-TVYRV 108
Query: 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 109 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 9 VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYM 68
+V +V F + + E ++++ E L HPNI++ + Y+ D+ R+ I EY
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFY----DRRRIYLILEYA 105
Query: 69 SSGSLKQFLKRT 80
G L + L+++
Sbjct: 106 PRGELYKELQKS 117
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+EK+ L++P++V FH ++ D V + E SL + KR K
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF----VYVVLEICRRRSLLELHKRRKAVT 140
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ + + Q + + YLH+ +IH +L +F+ + VKIG
Sbjct: 141 E----PEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIG 184
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + ITEYM +GSL FLK T + KL ++
Sbjct: 70 MKQLQHQRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 122
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 123 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 169
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR------TKRNVKKLPLSAWK 93
+H NIV TH V+ ITEY G L FL+R K + + L L
Sbjct: 108 QHENIVNL--LGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 163
Query: 94 RWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ SQ+ +++L S + IH ++ + + + + KIG
Sbjct: 164 HFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIG 202
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+EK+ L++P++V FH ++ D V + E SL + KR K
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF----VYVVLEICRRRSLLELHKRRKAVT 140
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ + + Q + + YLH+ +IH +L +F+ + VKIG
Sbjct: 141 E----PEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIG 184
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
Q+EK+ L++P++V FH ++ D V + E SL + KR K
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF----VYVVLEICRRRSLLELHKRRKAVT 140
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ + + Q + + YLH+ +IH +L +F+ + VKIG
Sbjct: 141 E----PEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIG 184
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81
+ E + Q E ++ H N+++ + T T + + YM++GS+ L+ +
Sbjct: 68 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLR--E 120
Query: 82 RNVKKLPLSAWKRWCSQILSA--LSYLHS-CSPPIIHGNLTCDTIFI 125
R + PL KR + SA L+YLH C P IIH ++ I +
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSG--SLKQFLKRTKRNVK--KLPLSA 91
L +L+HPN++ + + +H D+ +V + +Y + +F + +K N K +LP
Sbjct: 72 LRELKHPNVISLQKVFL-SHADR-KVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGM 129
Query: 92 WKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG 129
K QIL + YLH+ ++H +L I + G
Sbjct: 130 VKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEG 165
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFL-- 77
K F ++ +Q E + L+HPNI++ + +T D + + E + G L + +
Sbjct: 44 KYFVEDVDRFKQEIEIMKSLDHPNIIRLY----ETFEDNTDIYLVMELCTGGELFERVVH 99
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNL 118
KR R S R +LSA++Y H + + H +L
Sbjct: 100 KRVFRE------SDAARIMKDVLSAVAYCHKLN--VAHRDL 132
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + ITEYM +GSL FLK T + KL ++
Sbjct: 68 MKQLQHQRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 120
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 121 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFL-- 77
K F ++ +Q E + L+HPNI++ + +T D + + E + G L + +
Sbjct: 61 KYFVEDVDRFKQEIEIMKSLDHPNIIRLY----ETFEDNTDIYLVMELCTGGELFERVVH 116
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNL 118
KR R S R +LSA++Y H + + H +L
Sbjct: 117 KRVFRE------SDAARIMKDVLSAVAYCHKLN--VAHRDL 149
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 62 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+QI ++++ + IH +L I + KI IE+ +
Sbjct: 115 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + ITEYM +GSL FLK T + KL ++
Sbjct: 71 MKQLQHQRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 123
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 124 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 170
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 62 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 115 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 33 FENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
F L Q+ HP+++K + D P ++ I EY GSL+ FL+ +++
Sbjct: 77 FNVLKQVNHPHVIKLY---GACSQDGP-LLLIVEYAKYGSLRGFLRESRK 122
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 63 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 115
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 116 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 162
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 34 ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTKRNVKKLPLSAW 92
E L +L+HPNI+K D+ + + E + G L + +KR K+
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSS----FYIVGELYTGGELFDEIIKR-----KRFSEHDA 123
Query: 93 KRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
R Q+ S ++Y+H + I+H +L + I ++
Sbjct: 124 ARIIKQVFSGITYMHKHN--IVHRDLKPENILLE 155
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 33 FENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
F L Q+ HP+++K + D P ++ I EY GSL+ FL+ +++
Sbjct: 77 FNVLKQVNHPHVIKLY---GACSQDGP-LLLIVEYAKYGSLRGFLRESRK 122
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 64 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 116
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 117 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 163
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR------TKRNVKKLPLSAWK 93
+H NIV TH V+ ITEY G L FL+R K + + L L
Sbjct: 100 QHENIVNL--LGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 155
Query: 94 RWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ SQ+ +++L S + IH ++ + + + + KIG
Sbjct: 156 HFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIG 194
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
+ QL+H +V+ + T + + ITEYM +GSL FLK T + KL ++
Sbjct: 62 MKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSLVDFLK-TPSGI-KLTINKLLDM 114
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+QI ++++ + IH +L I + KI IE+
Sbjct: 115 AAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 7/148 (4%)
Query: 26 EEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85
E +++ + L +L H N+++ + +K ++ + EY G +++ L K
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYN--EEKQKMYMVMEYCVCG-MQEMLDSVPE--K 104
Query: 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENK 145
+ P+ + Q++ L YLHS I+H ++ + + G +KI +
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 146 KYLSATRQTYGRPISGQYEIVTKTNNVT 173
R + G P EI + +
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFS 190
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 26 EEKIQQVFENLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
+E +++ N L HPNIV+F T TH + + EY S G L + + N
Sbjct: 59 DENVKREIINHRSLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERIC----NA 109
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+ + + Q++S +SY H+ + H +L + + + ++ + ++ ++
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYS-KS 166
Query: 145 KKYLSATRQTYGRPISGQYEIVTK 168
S + T G P E++ K
Sbjct: 167 SVLHSQPKDTVGTPAYIAPEVLLK 190
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 26 EEKIQQVFENLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
+E +++ N L HPNIV+F T TH + + EY S G L + + N
Sbjct: 59 DENVKREIINHRSLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERIC----NA 109
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN 144
+ + + Q++S +SY H+ + H +L + + + ++ + ++ ++
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYS-KS 166
Query: 145 KKYLSATRQTYGRPISGQYEIVTK 168
S + T G P E++ K
Sbjct: 167 SVLHSQPKSTVGTPAYIAPEVLLK 190
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 26 EEKIQQVFENLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
+E +++ N L HPNIV+F T TH + + EY S G L + + N
Sbjct: 59 DENVKREIINHRSLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERIC----NA 109
Query: 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
+ + + Q++S +SY H+ + H +L + +
Sbjct: 110 GRFSEDEARFFFQQLISGVSYAHAMQ--VAHRDLKLENTLLD 149
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ + ++ +
Sbjct: 57 KAFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVA 109
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 26 EEKIQQVFENLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84
+E +++ N L HPNIV+F T TH + + EY S G L + + N
Sbjct: 58 DENVKREIINHRSLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERIC----NA 108
Query: 85 KKLPLSAWKRWCSQILSALSYLHS 108
+ + + Q++S +SY H+
Sbjct: 109 GRFSEDEARFFFQQLISGVSYCHA 132
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L+H NIV+ H H+DK ++ + E+ LK++ ++ K +
Sbjct: 55 LKELKHKNIVRLHDVL---HSDK-KLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSF 106
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L + HS + ++H +L + I NG +K+
Sbjct: 107 LFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLA 143
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L +L+H NIV+ H H+DK ++ + E+ LK++ ++ K +
Sbjct: 55 LKELKHKNIVRLHDVL---HSDK-KLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSF 106
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
Q+L L + HS + ++H +L + I NG +K+
Sbjct: 107 LFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLA 143
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 36 LTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
L + P IV F+ +++D + E+M GSL Q LK+ R +P +
Sbjct: 85 LHECNSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAGR----IPEQILGK 135
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
++ L+YL I+H ++ I + G +K+ CD
Sbjct: 136 VSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 175
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 31 QVFEN----LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86
Q F N L + H NI+ F Y T K + +T++ SL + L + +
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMT-----KDNLAIVTQWCEGSSLYKHLHVQETKFQM 131
Query: 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
L R +Q + YLH+ + IIH ++ + IF+ VKIG
Sbjct: 132 FQLIDIARQTAQ---GMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIG 174
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 31 QVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF---ITEYMSSGSLKQFLKRTKRNVKKL 87
Q+ ++L L HPNIV+ Y+ R I+ + EY+ + +R V
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPP 127
Query: 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI-QHNGLVKIGCD 136
P+ K + Q++ ++ LH S + H ++ + + + +G +K+ CD
Sbjct: 128 PI-LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKL-CD 175
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 36 LTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
L + P IV F+ +++D + E+M GSL Q LK+ R +P +
Sbjct: 120 LHECNSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAGR----IPEQILGK 170
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
++ L+YL I+H ++ I + G +K+ CD
Sbjct: 171 VSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKL-CD 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 36 LTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
L + P IV F+ +++D + E+M GSL Q LK+ R +P +
Sbjct: 77 LHECNSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAGR----IPEQILGK 127
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
++ L+YL I+H ++ I + G +K+ CD
Sbjct: 128 VSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 167
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 34 ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTKRNVKKLPLSAW 92
E L +L+HPNI+K D+ + + E + G L + +KR K+
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSS----FYIVGELYTGGELFDEIIKR-----KRFSEHDA 123
Query: 93 KRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
R Q+ S ++Y+H + I+H +L + I ++
Sbjct: 124 ARIIKQVFSGITYMHKHN--IVHRDLKPENILLE 155
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 34 ENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL-KQFLKRTKRNVKKLPLSAW 92
E L +L+HPNI+K D+ + + E + G L + +KR K+
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSS----FYIVGELYTGGELFDEIIKR-----KRFSEHDA 123
Query: 93 KRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
R Q+ S ++Y+H + I+H +L + I ++
Sbjct: 124 ARIIKQVFSGITYMHKHN--IVHRDLKPENILLE 155
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 57 KRFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 109
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 24 AQEEKIQQVFENLTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
A +I + + L + P IV F+ +++D + E+M GSL Q LK+ R
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGR 103
Query: 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+P + ++ L+YL I+H ++ I + G +K+ CD
Sbjct: 104 ----IPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 151
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 70 KRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 122
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 123 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 179
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 61 KRFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 113
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 114 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 170
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 76 KRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 128
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 129 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 185
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQ 75
+ K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 67 QDKRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR 119
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V C
Sbjct: 120 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 177
Query: 136 D 136
D
Sbjct: 178 D 178
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 57 KRFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 109
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 57 KRFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 109
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWK------ 93
+H NIV TH V+ ITEY G L FL+R R ++ P A
Sbjct: 108 QHENIVNL--LGACTHGGP--VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 94 ----RWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ SQ+ +++L S IH ++ + + + + KIG
Sbjct: 164 RDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIG 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 65 KRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 117
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 118 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 174
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQ 75
+ K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 60 QDKRFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR 112
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V C
Sbjct: 113 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 170
Query: 136 D 136
D
Sbjct: 171 D 171
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 69 KRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 121
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 122 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 178
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWK------ 93
+H NIV TH V+ ITEY G L FL+R R ++ P A
Sbjct: 108 QHENIVNL--LGACTHGGP--VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLST 163
Query: 94 ----RWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
+ SQ+ +++L S IH ++ + + + + KIG
Sbjct: 164 RDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIG 206
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 58 KRFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 110
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 111 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 167
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 57 KAFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 109
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 24 AQEEKIQQVFENLTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
A +I + + L + P IV F+ +++D + E+M GSL Q LK+ R
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAGR 100
Query: 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+P + ++ L+YL I+H ++ I + G +K+ CD
Sbjct: 101 ----IPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 148
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 24 AQEEKIQQVFENLTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
A +I + + L + P IV F+ +++D + E+M GSL Q LK+ R
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAGR 100
Query: 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+P + ++ L+YL I+H ++ I + G +K+ CD
Sbjct: 101 ----IPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 148
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 19 RKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL----- 73
+K + +E ++ L +++HPNIV D + + I + +S G L
Sbjct: 53 KKALEGKEGSMENEIAVLHKIKHPNIVAL----DDIYESGGHLYLIMQLVSGGELFDRIV 108
Query: 74 -KQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF 124
K F T+R+ +L Q+L A+ YLH I+H +L + +
Sbjct: 109 EKGFY--TERDASRLIF--------QVLDAVKYLHDLG--IVHRDLKPENLL 148
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQ 75
+ K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 134 QDKRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR 186
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V C
Sbjct: 187 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 244
Query: 136 D 136
D
Sbjct: 245 D 245
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 24 AQEEKIQQVFENLTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
A +I + + L + P IV F+ +++D + E+M GSL Q LK+ R
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGR 100
Query: 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+P + ++ L+YL I+H ++ I + G +K+ CD
Sbjct: 101 ----IPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 148
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQ 75
+ K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 83 QDKRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR 135
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V C
Sbjct: 136 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 193
Query: 136 D 136
D
Sbjct: 194 D 194
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 24 AQEEKIQQVFENLTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82
A +I + + L + P IV F+ +++D + E+M GSL Q LK+ R
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGR 100
Query: 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+P + ++ L+YL I+H ++ I + G +K+ CD
Sbjct: 101 ----IPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 148
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 57 KAFKNRELQIMR------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 109
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 166
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 36 LTQLEHPNIVKFH-RYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
L + P IV F+ +++D + E+M GSL Q LK+ R +P +
Sbjct: 58 LHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGR----IPEQILGK 108
Query: 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
++ L+YL I+H ++ I + G +K+ CD
Sbjct: 109 VSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKL-CD 148
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQ 75
+ K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 91 QDKRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR 143
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V C
Sbjct: 144 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 201
Query: 136 D 136
D
Sbjct: 202 D 202
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 91 KRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 143
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 144 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 200
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 20 KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQFL 77
K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 91 KRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 143
Query: 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V CD
Sbjct: 144 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCD 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 33 FENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS----LKQFLKRTKRNVKKLP 88
+ ++Q HPNIV ++ + K + + + +S GS +K + + + L
Sbjct: 64 IQAMSQCHHPNIVSYYTSFV----VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119
Query: 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
S ++L L YLH IH ++ I + +G V+I
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIA 163
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 18 ERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIF--ITEYMSSGSLKQ 75
+ K FK +E +I + +L+H NIV+ ++ + K V + +Y+ ++ +
Sbjct: 93 QDKRFKNRELQI------MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR 145
Query: 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135
+ R + LP+ K + Q+ +L+Y+HS I H ++ + + + V C
Sbjct: 146 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLC 203
Query: 136 D 136
D
Sbjct: 204 D 204
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 33 FENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS----LKQFLKRTKRNVKKLP 88
+ ++Q HPNIV ++ + K + + + +S GS +K + + + L
Sbjct: 59 IQAMSQCHHPNIVSYYTSFV----VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 114
Query: 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
S ++L L YLH IH ++ I + +G V+I
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIA 158
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTC 120
V +T+ M G L L + N +L WC QI +SYL ++H +L
Sbjct: 93 VQLVTQLMPYGCL---LDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR--LVHRDLAA 147
Query: 121 DTIFIQHNGLVKI 133
+ ++ VKI
Sbjct: 148 RNVLVKSPNHVKI 160
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 35 NLTQLEHPNIVKFHRY-WTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWK 93
N L HPNIV+F T TH + + EY S G L + + N + +
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERIC----NAGRFSEDEAR 118
Query: 94 RWCSQILSALSYLHS 108
+ Q++S +SY H+
Sbjct: 119 FFFQQLISGVSYCHA 133
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 86 KHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 140
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +LT + + N ++KI I N
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 199 YYKKT--TNGR 207
>pdb|1T9F|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Structure
Of A Protein With Unknown Function
Length = 187
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 147 YLSATRQTYGRPISGQYEIVTKTNNVT 173
YLS + Q +GRPI GQ E+V T+++T
Sbjct: 142 YLSLSGQQFGRPIHGQREVV-GTDSIT 167
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 26/151 (17%)
Query: 24 AQEEKIQQVFENLTQLE----HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79
A EE + + + ++ H NI+ T D P + I EY S G+L+++L R
Sbjct: 79 ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-R 133
Query: 80 TKR--------NVKKLPLS--AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQ 126
+R ++ ++P +K S Q+ + YL S IH +L + +
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT 191
Query: 127 HNGLVKIGCDTYTHTIENKKYLSATRQTYGR 157
N ++KI I N Y T T GR
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKT--TNGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 41 HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQIL 100
HPNIVK H + +D+ + E ++ G L + +K+ K++ + S R +++
Sbjct: 65 HPNIVKLHEVF----HDQLHTFLVMELLNGGELFERIKK-KKHFSETEASYIMR---KLV 116
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFI 125
SA+S++H ++H +L + +
Sbjct: 117 SAVSHMHDVG--VVHRDLKPENLLF 139
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 81 KRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHN 128
K N + LPL K+ Q+L L YLH+ C IIH ++ + I + N
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 21 NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDK 58
N + EK+ + + L +LEHP IV++ W +T +K
Sbjct: 43 NRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 62 IFITEYMSSGSLKQFLKRTKRNVKKLPLSAWK-RWCSQILSALSYLHSCSPPIIHGNLTC 120
I + E++ GSL +LK+ K + L WK Q+ +A+ +L + +IHGN+
Sbjct: 88 ILVQEFVKFGSLDTYLKKNKNCINIL----WKLEVAKQLAAAMHFLEENT--LIHGNVCA 141
Query: 121 DTIFI 125
I +
Sbjct: 142 KNILL 146
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 81 KRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHN 128
K N + LPL K+ Q+L L YLH+ C IIH ++ + I + N
Sbjct: 121 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|2OUV|A Chain A, Crystal Structure Of Pde10a2 Mutant Of D564n
pdb|2OUV|B Chain B, Crystal Structure Of Pde10a2 Mutant Of D564n
pdb|2OUY|A Chain A, Crystal Structure Of Pde10a2 Mutant D564a In Complex With
Camp.
pdb|2OUY|B Chain B, Crystal Structure Of Pde10a2 Mutant D564a In Complex With
Camp
Length = 331
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 28 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 80
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 81 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHNLDHRGFSNS 128
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 129 YLQKFDHPLAALYSTST 145
>pdb|4AEL|A Chain A, Pde10a In Complex With The Inhibitor Az5
pdb|4AEL|B Chain B, Pde10a In Complex With The Inhibitor Az5
Length = 344
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 28 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 80
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 81 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 128
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 129 YLQKFDHPLAALYSTST 145
>pdb|4DDL|A Chain A, Pde10a Crystal Structure Complexed With Novel Inhibitor
pdb|4DDL|B Chain B, Pde10a Crystal Structure Complexed With Novel Inhibitor
Length = 338
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 22 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 74
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 75 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 122
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 123 YLQKFDHPLAALYSTST 139
>pdb|2Y0J|A Chain A, Triazoloquinazolines As A Novel Class Of Phosphodiesterase
10a (Pde10a) Inhibitors, Part 2, Lead-Optimisation.
pdb|2Y0J|B Chain B, Triazoloquinazolines As A Novel Class Of Phosphodiesterase
10a (Pde10a) Inhibitors, Part 2, Lead-Optimisation
Length = 340
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 32 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 84
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T + L+ C H ++++ + ++
Sbjct: 85 NWKH-------AVTVAH-CMYAILQNNHTLFTDLERKGLLIACLC----HDLDHRGFSNS 132
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 133 YLQKFDHPLAALYSTST 149
>pdb|3SN7|A Chain A, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SN7|B Chain B, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNI|A Chain A, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNI|B Chain B, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNL|A Chain A, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|3SNL|B Chain B, Highly Potent, Selective, And Orally Active
Phosphodiestarase 10a Inhibitors
pdb|4FCB|A Chain A, Potent And Selective Phosphodiesterase 10a Inhibitors
pdb|4FCB|B Chain B, Potent And Selective Phosphodiesterase 10a Inhibitors
pdb|4FCD|A Chain A, Potent And Selective Phosphodiesterase 10a Inhibitors
pdb|4FCD|B Chain B, Potent And Selective Phosphodiesterase 10a Inhibitors
Length = 345
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 29 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 81
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 82 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 129
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 130 YLQKFDHPLAALYSTST 146
>pdb|4HEU|A Chain A, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
((1-(3-(4-
((1h-Benzo[d]imidazol-2-Yl)amino)phenoxy)pyridin-2-
Yl)piperidin-4- Yl)methanol)
pdb|4HEU|B Chain B, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
((1-(3-(4-
((1h-Benzo[d]imidazol-2-Yl)amino)phenoxy)pyridin-2-
Yl)piperidin-4- Yl)methanol)
pdb|4HF4|A Chain A, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
(1-(1-(3-(4-
(Benzo[d]thiazol-2-Ylamino)phenoxy)pyrazin-2-
Yl)piperidin-4-Yl) Ethanol)
pdb|4HF4|B Chain B, Crystal Structure Of Pde10a With A Biaryl Ether Inhibitor
(1-(1-(3-(4-
(Benzo[d]thiazol-2-Ylamino)phenoxy)pyrazin-2-
Yl)piperidin-4-Yl) Ethanol)
Length = 318
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 22 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 74
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 75 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 122
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 123 YLQKFDHPLAALYSTST 139
>pdb|2OUN|A Chain A, Crystal Structure Of Pde10a2 In Complex With Amp
pdb|2OUN|B Chain B, Crystal Structure Of Pde10a2 In Complex With Amp
pdb|2OUP|A Chain A, Crystal Structure Of Pde10a
pdb|2OUP|B Chain B, Crystal Structure Of Pde10a
pdb|2OUQ|A Chain A, Crystal Structure Of Pde10a2 In Complex With Gmp
pdb|2OUQ|B Chain B, Crystal Structure Of Pde10a2 In Complex With Gmp
Length = 331
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 28 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 80
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 81 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 128
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 129 YLQKFDHPLAALYSTST 145
>pdb|4DFF|A Chain A, The Sar Development Of Dihydroimidazoisoquinoline
Derivatives As Phosphodiesterase 10a Inhibitors For The
Treatment Of Schizophrenia
pdb|4DFF|B Chain B, The Sar Development Of Dihydroimidazoisoquinoline
Derivatives As Phosphodiesterase 10a Inhibitors For The
Treatment Of Schizophrenia
Length = 352
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 36 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 88
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 89 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 136
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 137 YLQKFDHPLAALYSTST 153
>pdb|2WEY|A Chain A, Human Pde-Papaverine Complex Obtained By Ligand Soaking Of
Cross-Linked Protein Crystals
pdb|2WEY|B Chain B, Human Pde-Papaverine Complex Obtained By Ligand Soaking Of
Cross-Linked Protein Crystals
Length = 343
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 27 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 79
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 80 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 127
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 128 YLQKFDHPLAALYSTST 144
>pdb|3UI7|A Chain A, Discovery Of Orally Active Pyrazoloquinoline As A Potent
Pde10 Inhibitor For The Management Of Schizophrenia
pdb|3UI7|B Chain B, Discovery Of Orally Active Pyrazoloquinoline As A Potent
Pde10 Inhibitor For The Management Of Schizophrenia
Length = 333
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 36 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 88
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 89 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 136
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 137 YLQKFDHPLAALYSTST 153
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L+ HP++V + +++ +I I +YM +G+LK+ L + +
Sbjct: 89 LSFCRHPHLVSLIGFC----DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
C L YLH+ + IIH ++ I + N + KI
Sbjct: 145 CIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKI 180
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L+ HP++V + +++ +I I +YM +G+LK+ L + +
Sbjct: 89 LSFCRHPHLVSLIGFC----DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI 133
C L YLH+ + IIH ++ I + N + KI
Sbjct: 145 CIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKI 180
>pdb|2OUR|A Chain A, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Camp
pdb|2OUR|B Chain B, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Camp
pdb|2OUS|A Chain A, Crystal Structure Of Pde10a2 Mutant D674a
pdb|2OUS|B Chain B, Crystal Structure Of Pde10a2 Mutant D674a
pdb|2OUU|A Chain A, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Cgmp
pdb|2OUU|B Chain B, Crystal Structure Of Pde10a2 Mutant D674a In Complex With
Cgmp
Length = 331
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 28 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 80
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 81 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 128
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 129 YLQKFDHPLAALYSTST 145
>pdb|3UUO|A Chain A, The Discovery Of Potent, Selectivity, And Orally
Bioavailable Pyrozoloquinolines As Pde10 Inhibitors For
The Treatment Of Schizophrenia
pdb|3UUO|B Chain B, The Discovery Of Potent, Selectivity, And Orally
Bioavailable Pyrozoloquinolines As Pde10 Inhibitors For
The Treatment Of Schizophrenia
Length = 337
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 40 ELFHFDIGPFENMW-------PGIFVYMVHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 92
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSA 150
WK A++ H C I+ N T T ++ GL+ I C H ++++ + ++
Sbjct: 93 NWKH-------AVTVAH-CMYAILQNNHTLFTD-LERKGLL-IAC--LCHDLDHRGFSNS 140
Query: 151 TRQTYGRPISGQYEIVT 167
Q + P++ Y T
Sbjct: 141 YLQKFDHPLAALYSTST 157
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 145 KHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 199
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N ++KI I N
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 258 YYKKT--TNGR 266
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 99 KHKNIITLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 153
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N ++KI I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 212 YYKKT--TNGR 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 91 KHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 145
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N ++KI I N
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 204 YYKKT--TNGR 212
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 99 KHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 153
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N ++KI I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 212 YYKNT--TNGR 220
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 88 KHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 142
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N ++KI I N
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 201 YYKKT--TNGR 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 39 LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN--VKKLPLSAWKRWC 96
L HPN++ P V+ YM G L QF++ +RN VK L +
Sbjct: 79 LNHPNVLALIGIMLPPEG-LPHVLL--PYMCHGDLLQFIRSPQRNPTVKDL-----ISFG 130
Query: 97 SQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKKYLSATRQTYG 156
Q+ + YL +H +L + + VK+ I +++Y S + +
Sbjct: 131 LQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 157 R 157
R
Sbjct: 189 R 189
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 99 KHKNIIHLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 153
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N ++KI I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 212 YYKKT--TNGR 220
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 10 VWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMS 69
V+N + F + + +E FE L +L H NIVK + + + I E+
Sbjct: 41 VFNNISFLRPVDVQMRE------FEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCP 92
Query: 70 SGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF 124
GSL L+ N LP S + ++ +++L I+H N+ I
Sbjct: 93 CGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIM 144
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPR 60
+D ++G ++NE F +R Q K ++++ L P + F H DK R
Sbjct: 82 LDAKDGR--LFNEQNFFQRAAKPLQVNKWKKLYST-PLLAIPTCMGF-----GVHQDKYR 133
Query: 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTC 120
+ + SL+ L + ++V L + + ++L AL +LH +HGN+T
Sbjct: 134 FLVLPSL--GRSLQSALDVSPKHV--LSERSVLQVACRLLDALEFLHENE--YVHGNVTA 187
Query: 121 DTIFI 125
+ IF+
Sbjct: 188 ENIFV 192
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 135
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 136 KALDYCHSQG--IMHRDVKPHNVMIDH 160
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 135
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 136 KALDYCHSQG--IMHRDVKPHNVMIDH 160
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 135
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 136 KALDYCHSQG--IMHRDVKPHNVMIDH 160
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T +++ + ++L
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDIRY--------YIYELL 156
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 157 KALDYCHSQG--IMHRDVKPHNVMIDH 181
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 135
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 136 KALDYCHSQG--IMHRDVKPHNVMIDH 160
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 136
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 137 KALDYCHSQG--IMHRDVKPHNVMIDH 161
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 136
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 137 KALDYCHSQG--IMHRDVKPHNVMIDH 161
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 135
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 136 KALDYCHSQG--IMHRDVKPHNVMIDH 160
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 137
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 138 KALDYCHSQG--IMHRDVKPHNVMIDH 162
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 42 PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLK-QFLKRTKRNVKKLPLSAWKRWCSQIL 100
PNIVK D H+ P +IF EY+++ K + T ++ + + ++L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF--EYVNNTDFKVLYPTLTDYDI--------RYYIYELL 135
Query: 101 SALSYLHSCSPPIIHGNLTCDTIFIQH 127
AL Y HS I+H ++ + I H
Sbjct: 136 KALDYCHSQG--IMHRDVKPHNVMIDH 160
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 10 VWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMS 69
V+N + F + + +E FE L +L H NIVK + + + I E+
Sbjct: 41 VFNNISFLRPVDVQMRE------FEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCP 92
Query: 70 SGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF 124
GSL L+ N LP S + ++ +++L I+H N+ I
Sbjct: 93 CGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIM 144
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 42 PNIVKF--HRYWTDTHNDKPRVIFIT---EYMSSGSLKQFL-KRTKRNVKKLPLSAWKRW 95
P+IV+ H + N + +V+ +T Y SSG+ K+FL ++T+ V+ L LS
Sbjct: 29 PSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGLILD 88
Query: 96 CS-QILSAL 103
C I++A+
Sbjct: 89 CEIPIIAAM 97
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--------NVKKLPLS- 90
+H NI+ T D P + I EY S G+L+++L R +R ++ ++P
Sbjct: 99 KHKNIINLLGACT---QDGPLYV-IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQ 153
Query: 91 -AWKRWCS---QILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIENKK 146
+K S Q+ + YL S IH +L + + N +++I I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 147 YLSATRQTYGR 157
Y T T GR
Sbjct: 212 YYKKT--TNGR 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 11/100 (11%)
Query: 35 NLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKR 94
N L H NI+ F + N ++ IT Y GSL FL+R + L R
Sbjct: 55 NTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLEPHLALR 109
Query: 95 WCSQILSALSYLH------SCSPPIIHGNLTCDTIFIQHN 128
L++LH P I H + + ++ N
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSN 149
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 62 IFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILS-ALSYLHSCSPPIIHGNLTC 120
I + E++ GSL +LK+ K + L WK ++ L+ A+ +L + +IHGN+
Sbjct: 88 ILVQEFVKFGSLDTYLKKNKNCINIL----WKLEVAKQLAWAMHFLEENT--LIHGNVCA 141
Query: 121 DTIFI 125
I +
Sbjct: 142 KNILL 146
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 25/114 (21%)
Query: 40 EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR-------------------T 80
+H NIV TH V+ ITEY G L FL+R
Sbjct: 93 QHENIVNL--LGACTHGGP--VLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIG 134
K + + L L + SQ+ +++L S + IH ++ + + + + KIG
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIG 200
>pdb|3LXG|A Chain A, Crystal Structure Of Rat Phosphodiesterase 10a In Complex
Wi Web-3
Length = 308
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 30/139 (21%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 11 ELFHFDIGPFENMW-------PGIFVYMIHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 63
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF--IQHNGLVKIGCDTYTHTIENKKYL 148
WK A++ H C I+ N + +F ++ GL+ I C H ++++ +
Sbjct: 64 NWKH-------AVTVAH-CMYAILQNN---NGLFTDLERKGLL-IAC--LCHDLDHRGFS 109
Query: 149 SATRQTYGRPISGQYEIVT 167
++ Q + P++ Y T
Sbjct: 110 NSYLQKFDHPLAALYSTST 128
>pdb|2O8H|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat
Phosphodiesterase 10a
pdb|2OVV|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat
Phosphodiesterase 10a
pdb|2OVY|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat
Phosphodiesterase 10a
pdb|3QPN|A Chain A, Structure Of Pde10-Inhibitor Complex
pdb|3QPO|A Chain A, Structure Of Pde10-Inhibitor Complex
pdb|3QPP|A Chain A, Structure Of Pde10-Inhibitor Complex
Length = 362
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 30/139 (21%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 41 ELFHFDIGPFENMW-------PGIFVYMIHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 93
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF--IQHNGLVKIGCDTYTHTIENKKYL 148
WK A++ H C I+ N + +F ++ GL+ I C H ++++ +
Sbjct: 94 NWKH-------AVTVAH-CMYAILQNN---NGLFTDLERKGLL-IAC--LCHDLDHRGFS 139
Query: 149 SATRQTYGRPISGQYEIVT 167
++ Q + P++ Y T
Sbjct: 140 NSYLQKFDHPLAALYSTST 158
>pdb|3HQW|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
Length = 376
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 30/139 (21%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 55 ELFHFDIGPFENMW-------PGIFVYMIHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 107
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF--IQHNGLVKIGCDTYTHTIENKKYL 148
WK A++ H C I+ N + +F ++ GL+ I C H ++++ +
Sbjct: 108 NWKH-------AVTVAH-CMYAILQNN---NGLFTDLERKGLL-IAC--LCHDLDHRGFS 153
Query: 149 SATRQTYGRPISGQYEIVT 167
++ Q + P++ Y T
Sbjct: 154 NSYLQKFDHPLAALYSTST 172
>pdb|3HQY|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
pdb|3HQZ|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
pdb|3HR1|A Chain A, Discovery Of Novel Inhibitors Of Pde10a
Length = 380
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 30/139 (21%)
Query: 38 QLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGS-------LKQFLKRTKRNVKKLPLS 90
+L H +I F W P + + S G+ L +F+ K+N +++P
Sbjct: 59 ELFHFDIGPFENMW-------PGIFVYMIHRSCGTSCFELEKLCRFIMSVKKNYRRVPYH 111
Query: 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF--IQHNGLVKIGCDTYTHTIENKKYL 148
WK A++ H C I+ N + +F ++ GL+ I C H ++++ +
Sbjct: 112 NWKH-------AVTVAH-CMYAILQNN---NGLFTDLERKGLL-IAC--LCHDLDHRGFS 157
Query: 149 SATRQTYGRPISGQYEIVT 167
++ Q + P++ Y T
Sbjct: 158 NSYLQKFDHPLAALYSTST 176
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 81 KRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFI 125
K N + LP+ K Q+L L YLHS C IIH ++ + I +
Sbjct: 131 KSNYQGLPVRCVKSIIRQVLQGLDYLHSKCK--IIHTDIKPENILM 174
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRW 95
L QL H N+V + K R + E++ L + L +++
Sbjct: 78 LKQLRHENLVNL----LEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKY 129
Query: 96 CSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136
QI++ + + HS + IIH ++ + I + +G+VK+ CD
Sbjct: 130 LFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKL-CD 167
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,338,855
Number of Sequences: 62578
Number of extensions: 198383
Number of successful extensions: 1167
Number of sequences better than 100.0: 482
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 425
Number of HSP's that attempted gapping in prelim test: 1000
Number of HSP's gapped (non-prelim): 492
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)