Query psy238
Match_columns 218
No_of_seqs 185 out of 1512
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 23:31:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy238.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/238hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0595|consensus 100.0 1.8E-37 3.8E-42 251.5 15.2 168 2-181 31-223 (429)
2 KOG0615|consensus 100.0 7.6E-37 1.6E-41 248.0 11.4 167 1-177 192-386 (475)
3 KOG0598|consensus 100.0 3.2E-36 6.9E-41 241.7 13.3 175 3-188 47-241 (357)
4 KOG0581|consensus 100.0 1.7E-35 3.8E-40 237.6 14.5 163 2-175 100-280 (364)
5 KOG0575|consensus 100.0 1.5E-35 3.3E-40 250.3 14.6 168 2-180 39-226 (592)
6 KOG0616|consensus 100.0 2.9E-34 6.3E-39 224.6 12.4 167 2-179 65-248 (355)
7 KOG0192|consensus 100.0 1.8E-33 3.8E-38 233.6 16.0 165 4-177 62-251 (362)
8 KOG0611|consensus 100.0 6.8E-34 1.5E-38 231.1 12.2 164 2-176 74-257 (668)
9 KOG1187|consensus 100.0 5.4E-33 1.2E-37 231.6 15.2 164 4-176 97-282 (361)
10 KOG0591|consensus 100.0 2.6E-34 5.6E-39 223.7 6.6 174 2-179 40-235 (375)
11 KOG0600|consensus 100.0 4.4E-33 9.5E-38 231.0 14.0 172 2-183 138-331 (560)
12 KOG0592|consensus 100.0 1.3E-33 2.8E-38 235.9 10.7 165 2-177 94-292 (604)
13 KOG0593|consensus 100.0 2.1E-33 4.6E-38 220.5 10.6 168 2-181 23-211 (396)
14 KOG0583|consensus 100.0 1.3E-32 2.8E-37 229.8 14.7 163 2-174 38-225 (370)
15 KOG0588|consensus 100.0 7.6E-33 1.6E-37 235.9 12.4 167 2-179 33-219 (786)
16 KOG0605|consensus 100.0 2.5E-31 5.4E-36 222.0 14.6 167 3-180 163-396 (550)
17 KOG0582|consensus 100.0 2.6E-31 5.7E-36 217.8 14.2 165 2-177 47-237 (516)
18 KOG0198|consensus 100.0 2.8E-31 6.1E-36 215.0 13.4 163 2-175 38-225 (313)
19 KOG0659|consensus 100.0 3.9E-31 8.6E-36 204.3 12.2 167 2-180 23-210 (318)
20 KOG0599|consensus 100.0 3.4E-31 7.3E-36 205.9 11.0 165 1-175 37-231 (411)
21 KOG0597|consensus 100.0 3.4E-31 7.4E-36 222.6 11.6 161 3-176 24-204 (808)
22 KOG0594|consensus 100.0 1.4E-30 3E-35 208.7 13.0 173 2-179 32-228 (323)
23 KOG0694|consensus 100.0 3.2E-31 7E-36 226.7 9.9 166 3-180 390-576 (694)
24 KOG0663|consensus 100.0 6.5E-31 1.4E-35 208.9 10.7 169 2-180 97-286 (419)
25 KOG0610|consensus 100.0 3.4E-30 7.5E-35 209.5 14.9 170 4-182 100-345 (459)
26 KOG0661|consensus 100.0 2.2E-31 4.8E-36 219.6 7.9 165 2-179 31-217 (538)
27 KOG0578|consensus 100.0 7E-31 1.5E-35 220.5 10.5 157 2-173 294-470 (550)
28 cd05628 STKc_NDR1 Catalytic do 100.0 7.7E-30 1.7E-34 213.8 16.3 167 2-179 22-243 (363)
29 KOG0585|consensus 100.0 1.8E-30 3.9E-35 214.3 11.6 168 2-177 118-324 (576)
30 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-29 2.9E-34 209.2 16.7 165 2-177 16-200 (323)
31 cd05625 STKc_LATS1 Catalytic d 100.0 2.4E-29 5.1E-34 212.2 17.0 165 2-177 22-253 (382)
32 PTZ00263 protein kinase A cata 100.0 1.7E-29 3.6E-34 209.2 15.7 165 2-177 39-220 (329)
33 cd05584 STKc_p70S6K Catalytic 100.0 2.4E-29 5.2E-34 207.7 16.6 166 3-178 21-206 (323)
34 cd05585 STKc_YPK1_like Catalyt 100.0 2.2E-29 4.9E-34 206.9 16.2 165 2-177 14-198 (312)
35 KOG0580|consensus 100.0 1E-30 2.2E-35 199.2 7.4 167 3-178 44-228 (281)
36 cd05593 STKc_PKB_gamma Catalyt 100.0 3.3E-29 7.1E-34 207.4 17.0 166 2-178 16-201 (328)
37 cd05612 STKc_PRKX_like Catalyt 100.0 1.6E-29 3.4E-34 205.8 14.4 166 2-178 22-204 (291)
38 cd05626 STKc_LATS2 Catalytic d 100.0 2.9E-29 6.3E-34 211.7 16.6 167 2-179 22-255 (381)
39 cd05629 STKc_NDR_like_fungal C 100.0 2.1E-29 4.7E-34 212.1 15.7 166 2-178 22-254 (377)
40 KOG0584|consensus 100.0 2.2E-30 4.9E-35 219.7 9.5 170 1-176 60-247 (632)
41 cd05598 STKc_LATS Catalytic do 100.0 2.3E-29 4.9E-34 211.8 15.6 166 2-178 22-250 (376)
42 cd05595 STKc_PKB_beta Catalyti 100.0 3.8E-29 8.1E-34 206.6 16.5 166 2-178 16-201 (323)
43 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.4E-29 9.5E-34 206.8 16.9 167 2-179 22-205 (333)
44 KOG0660|consensus 100.0 5.5E-30 1.2E-34 205.3 10.1 171 1-180 42-236 (359)
45 cd05631 STKc_GRK4 Catalytic do 100.0 5.8E-29 1.3E-33 201.8 16.4 167 2-177 21-206 (285)
46 cd05599 STKc_NDR_like Catalyti 100.0 4E-29 8.6E-34 209.4 15.6 166 2-178 22-245 (364)
47 KOG0586|consensus 100.0 1.3E-29 2.8E-34 214.7 12.6 167 2-180 77-263 (596)
48 PTZ00426 cAMP-dependent protei 100.0 5.2E-29 1.1E-33 207.2 16.0 162 6-178 56-234 (340)
49 cd05627 STKc_NDR2 Catalytic do 100.0 5.3E-29 1.2E-33 208.5 15.4 167 2-179 22-243 (360)
50 cd05594 STKc_PKB_alpha Catalyt 100.0 9.6E-29 2.1E-33 204.2 16.5 167 2-178 16-202 (325)
51 cd05621 STKc_ROCK2 Catalytic d 100.0 9.3E-29 2E-33 207.9 16.4 165 2-178 64-253 (370)
52 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-28 2.8E-33 199.3 16.5 169 2-177 14-202 (280)
53 KOG4717|consensus 100.0 4.6E-29 1E-33 208.1 14.0 170 2-182 39-229 (864)
54 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-28 2.8E-33 203.3 16.5 166 2-178 16-202 (323)
55 cd05582 STKc_RSK_N N-terminal 100.0 9.7E-29 2.1E-33 203.5 15.6 164 2-177 20-203 (318)
56 KOG0658|consensus 100.0 2.4E-30 5.1E-35 207.7 5.8 167 3-180 46-234 (364)
57 PTZ00267 NIMA-related protein 100.0 1.7E-28 3.8E-33 212.6 17.8 162 6-177 93-276 (478)
58 KOG0197|consensus 100.0 3.6E-29 7.8E-34 209.2 12.9 166 4-182 227-415 (468)
59 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-28 3.6E-33 202.5 16.0 167 2-179 16-203 (321)
60 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-28 2.9E-33 203.8 15.4 162 2-174 16-198 (329)
61 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-28 3.2E-33 202.8 15.4 167 2-179 16-203 (320)
62 KOG0986|consensus 100.0 5.3E-30 1.1E-34 210.6 6.6 166 3-177 207-391 (591)
63 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-28 3.9E-33 202.6 15.9 166 2-178 16-202 (325)
64 cd05596 STKc_ROCK Catalytic do 100.0 2E-28 4.4E-33 205.8 16.1 165 2-178 64-253 (370)
65 PHA02988 hypothetical protein; 100.0 3.3E-28 7.2E-33 197.4 16.6 169 4-178 41-228 (283)
66 cd05622 STKc_ROCK1 Catalytic d 100.0 2.5E-28 5.5E-33 205.3 16.2 164 2-177 64-252 (371)
67 cd05603 STKc_SGK2 Catalytic do 100.0 2.5E-28 5.5E-33 201.3 15.8 165 2-177 16-201 (321)
68 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-28 5.6E-33 202.1 15.5 163 3-175 25-210 (332)
69 cd05592 STKc_nPKC_theta_delta 100.0 3.7E-28 8.1E-33 200.1 16.1 166 2-178 16-202 (316)
70 cd05602 STKc_SGK1 Catalytic do 100.0 3.3E-28 7.1E-33 201.0 15.9 167 2-179 16-203 (325)
71 cd05618 STKc_aPKC_iota Catalyt 100.0 3.3E-28 7.1E-33 201.5 15.7 162 2-174 16-198 (329)
72 KOG0690|consensus 100.0 1.2E-29 2.7E-34 201.4 6.8 168 2-180 189-376 (516)
73 KOG0032|consensus 100.0 3.4E-28 7.4E-33 203.5 15.4 169 2-182 56-248 (382)
74 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.9E-28 6.2E-33 201.8 14.8 166 2-176 21-212 (338)
75 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.9E-28 1.3E-32 200.3 16.5 166 4-177 35-282 (338)
76 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.2E-28 9.2E-33 200.6 15.5 163 2-175 16-199 (327)
77 cd05605 STKc_GRK4_like Catalyt 100.0 9.7E-28 2.1E-32 194.7 16.8 167 2-177 21-206 (285)
78 cd05589 STKc_PKN Catalytic dom 100.0 5.9E-28 1.3E-32 199.4 15.8 165 2-178 20-207 (324)
79 KOG0607|consensus 100.0 5.6E-29 1.2E-33 197.1 8.9 161 1-175 98-294 (463)
80 cd05601 STKc_CRIK Catalytic do 100.0 5.6E-28 1.2E-32 199.9 15.3 168 2-179 22-216 (330)
81 cd06649 PKc_MEK2 Catalytic dom 100.0 1.6E-27 3.4E-32 197.5 17.9 165 2-178 26-208 (331)
82 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.6E-28 1E-32 196.8 14.3 164 2-178 26-210 (288)
83 cd05587 STKc_cPKC Catalytic do 100.0 9.9E-28 2.2E-32 198.1 16.5 166 2-178 21-207 (324)
84 cd05615 STKc_cPKC_alpha Cataly 100.0 7.5E-28 1.6E-32 198.8 15.6 166 2-178 21-207 (323)
85 cd05620 STKc_nPKC_delta Cataly 100.0 9.5E-28 2.1E-32 197.6 16.1 165 2-177 16-201 (316)
86 KOG0033|consensus 100.0 4.8E-29 1E-33 191.2 7.5 169 1-181 31-221 (355)
87 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.8E-28 1E-32 201.6 14.3 166 2-178 22-236 (350)
88 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1E-27 2.3E-32 196.0 15.7 163 2-177 26-209 (303)
89 KOG4721|consensus 100.0 8.7E-29 1.9E-33 208.4 9.2 149 5-174 146-313 (904)
90 cd05619 STKc_nPKC_theta Cataly 100.0 1.5E-27 3.2E-32 196.5 16.2 166 2-178 16-202 (316)
91 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-27 2.7E-32 198.1 15.8 166 2-177 22-213 (331)
92 PTZ00283 serine/threonine prot 100.0 1.6E-27 3.5E-32 207.2 17.2 172 2-177 53-250 (496)
93 cd05607 STKc_GRK7 Catalytic do 100.0 2.7E-27 5.9E-32 191.3 17.1 167 2-177 14-199 (277)
94 cd05616 STKc_cPKC_beta Catalyt 100.0 1.7E-27 3.7E-32 196.6 16.1 167 2-179 21-208 (323)
95 cd07848 STKc_CDKL5 Catalytic d 100.0 1.4E-27 3E-32 193.5 15.3 164 2-177 22-206 (287)
96 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-27 3.5E-32 196.4 15.7 166 2-178 16-202 (318)
97 KOG0589|consensus 100.0 5.9E-28 1.3E-32 201.0 12.7 168 2-178 25-212 (426)
98 cd05624 STKc_MRCK_beta Catalyt 100.0 2.2E-27 4.8E-32 196.6 16.1 166 2-177 22-213 (331)
99 cd06650 PKc_MEK1 Catalytic dom 100.0 5.9E-27 1.3E-31 194.3 17.7 164 2-177 26-207 (333)
100 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-27 3.2E-32 197.5 14.0 165 2-177 14-202 (330)
101 cd07876 STKc_JNK2 Catalytic do 100.0 5.1E-27 1.1E-31 196.4 16.7 165 2-177 42-227 (359)
102 KOG0667|consensus 99.9 2.1E-27 4.5E-32 202.7 13.5 165 2-180 207-396 (586)
103 cd05623 STKc_MRCK_alpha Cataly 99.9 7E-27 1.5E-31 193.7 16.0 165 3-177 23-213 (332)
104 KOG4236|consensus 99.9 1.2E-27 2.6E-32 200.1 11.4 162 2-175 585-769 (888)
105 cd05096 PTKc_DDR1 Catalytic do 99.9 1.8E-26 3.9E-31 188.7 18.2 165 5-178 45-248 (304)
106 KOG4250|consensus 99.9 6.3E-28 1.4E-32 207.3 9.8 166 2-173 34-225 (732)
107 cd05632 STKc_GRK5 Catalytic do 99.9 1.6E-26 3.4E-31 187.5 17.5 168 2-178 21-207 (285)
108 PHA03212 serine/threonine kina 99.9 5.7E-27 1.2E-31 198.3 15.4 153 2-175 113-286 (391)
109 PRK13184 pknD serine/threonine 99.9 7.5E-27 1.6E-31 211.1 17.1 168 2-176 23-235 (932)
110 PTZ00036 glycogen synthase kin 99.9 4.2E-27 9E-32 202.0 14.8 166 2-178 87-277 (440)
111 cd05630 STKc_GRK6 Catalytic do 99.9 1.9E-26 4.2E-31 187.1 17.1 166 2-176 21-205 (285)
112 cd07875 STKc_JNK1 Catalytic do 99.9 1.1E-26 2.4E-31 194.7 16.1 166 2-178 45-231 (364)
113 KOG0612|consensus 99.9 2.5E-28 5.5E-33 218.1 5.8 164 3-177 97-286 (1317)
114 cd07874 STKc_JNK3 Catalytic do 99.9 1.2E-26 2.6E-31 193.8 15.6 165 2-177 38-223 (355)
115 cd08227 PK_STRAD_alpha Pseudok 99.9 2.4E-26 5.1E-31 190.0 17.2 167 2-178 21-216 (327)
116 cd05106 PTKc_CSF-1R Catalytic 99.9 1.2E-26 2.7E-31 195.3 15.8 165 4-177 66-320 (374)
117 PLN00034 mitogen-activated pro 99.9 7.2E-27 1.6E-31 195.1 14.0 157 2-175 95-276 (353)
118 KOG0193|consensus 99.9 2.8E-27 6E-32 200.3 11.3 160 7-178 415-599 (678)
119 KOG0577|consensus 99.9 7.2E-28 1.6E-32 203.6 7.6 143 2-155 47-193 (948)
120 cd07862 STKc_CDK6 Catalytic do 99.9 1.7E-26 3.7E-31 187.4 15.3 167 5-178 26-215 (290)
121 KOG0194|consensus 99.9 7.8E-27 1.7E-31 197.4 13.5 162 9-180 189-371 (474)
122 cd08529 STKc_FA2-like Catalyti 99.9 3E-26 6.6E-31 182.3 16.2 165 2-176 21-205 (256)
123 cd07853 STKc_NLK Catalytic dom 99.9 1.8E-26 3.9E-31 194.0 15.7 168 2-178 21-211 (372)
124 KOG0574|consensus 99.9 7.1E-28 1.5E-32 189.8 6.6 158 1-173 53-230 (502)
125 KOG0201|consensus 99.9 3.4E-28 7.3E-33 199.1 4.8 160 1-173 33-212 (467)
126 PTZ00266 NIMA-related protein 99.9 2.2E-26 4.9E-31 209.0 16.8 171 2-176 34-247 (1021)
127 cd05580 STKc_PKA Catalytic dom 99.9 4.4E-26 9.5E-31 185.2 16.9 164 2-176 22-202 (290)
128 cd05064 PTKc_EphR_A10 Catalyti 99.9 5E-26 1.1E-30 182.7 17.0 163 4-178 31-215 (266)
129 cd05104 PTKc_Kit Catalytic dom 99.9 3.1E-26 6.7E-31 192.9 16.0 165 3-176 62-321 (375)
130 cd07872 STKc_PCTAIRE2 Catalyti 99.9 2.9E-26 6.3E-31 188.0 15.3 165 2-179 27-212 (309)
131 cd08228 STKc_Nek6 Catalytic do 99.9 6.9E-26 1.5E-30 181.5 16.8 167 3-176 24-210 (267)
132 KOG0604|consensus 99.9 1.2E-27 2.6E-32 188.0 6.4 159 2-173 83-264 (400)
133 cd07868 STKc_CDK8 Catalytic do 99.9 2.7E-26 5.9E-31 188.6 14.8 163 3-176 25-220 (317)
134 cd06625 STKc_MEKK3_like Cataly 99.9 6.9E-26 1.5E-30 181.0 16.8 164 2-175 23-210 (263)
135 cd07878 STKc_p38beta_MAPK11 Ca 99.9 3.5E-26 7.6E-31 190.1 15.6 165 2-176 36-220 (343)
136 cd06615 PKc_MEK Catalytic doma 99.9 9.1E-26 2E-30 185.1 17.2 163 2-176 22-202 (308)
137 cd08217 STKc_Nek2 Catalytic do 99.9 1.2E-25 2.6E-30 179.3 17.2 169 2-176 21-214 (265)
138 cd08219 STKc_Nek3 Catalytic do 99.9 1.3E-25 2.8E-30 178.9 17.0 164 2-176 21-204 (255)
139 cd05084 PTKc_Fes Catalytic dom 99.9 1.3E-25 2.9E-30 178.5 16.9 164 2-177 16-202 (252)
140 cd05116 PTKc_Syk Catalytic dom 99.9 1.4E-25 3.1E-30 179.0 17.0 163 3-178 19-205 (257)
141 KOG1989|consensus 99.9 2.2E-26 4.8E-31 201.8 13.2 166 4-175 60-261 (738)
142 cd05052 PTKc_Abl Catalytic dom 99.9 8.1E-26 1.7E-30 181.0 15.4 163 3-178 28-212 (263)
143 cd06619 PKc_MKK5 Catalytic dom 99.9 9.4E-26 2E-30 182.3 15.9 158 2-176 22-197 (279)
144 cd08229 STKc_Nek7 Catalytic do 99.9 9.5E-26 2.1E-30 180.7 15.8 168 2-176 23-210 (267)
145 KOG0608|consensus 99.9 7.5E-27 1.6E-31 198.8 9.8 161 6-177 654-876 (1034)
146 cd05049 PTKc_Trk Catalytic dom 99.9 2E-25 4.4E-30 180.0 17.5 166 4-178 33-231 (280)
147 cd06654 STKc_PAK1 Catalytic do 99.9 8.8E-26 1.9E-30 184.2 15.5 160 2-176 41-220 (296)
148 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.2E-25 2.5E-30 179.9 15.9 167 2-175 23-209 (267)
149 KOG1026|consensus 99.9 2.1E-26 4.5E-31 201.5 12.3 167 5-180 515-714 (774)
150 cd08223 STKc_Nek4 Catalytic do 99.9 2.5E-25 5.4E-30 177.2 17.5 166 2-176 21-206 (257)
151 cd06645 STKc_MAP4K3 Catalytic 99.9 1.5E-25 3.2E-30 179.7 16.2 160 2-175 30-212 (267)
152 cd06652 STKc_MEKK2 Catalytic d 99.9 2.1E-25 4.4E-30 178.8 17.0 166 2-175 23-212 (265)
153 cd08221 STKc_Nek9 Catalytic do 99.9 2E-25 4.3E-30 177.8 16.8 165 2-176 21-205 (256)
154 cd05108 PTKc_EGFR Catalytic do 99.9 1.9E-25 4.2E-30 183.7 17.1 159 8-179 38-219 (316)
155 cd05115 PTKc_Zap-70 Catalytic 99.9 2.5E-25 5.4E-30 177.9 17.3 161 5-178 21-205 (257)
156 cd05062 PTKc_IGF-1R Catalytic 99.9 2.6E-25 5.7E-30 179.3 17.6 166 4-178 34-228 (277)
157 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 2.1E-25 4.6E-30 181.0 17.1 168 2-176 22-207 (287)
158 cd07863 STKc_CDK4 Catalytic do 99.9 9.9E-26 2.1E-30 182.6 15.1 169 2-177 21-212 (288)
159 cd06655 STKc_PAK2 Catalytic do 99.9 1.2E-25 2.5E-30 183.5 15.6 161 2-177 40-220 (296)
160 cd05054 PTKc_VEGFR Catalytic d 99.9 2E-25 4.3E-30 185.5 17.1 165 4-176 35-280 (337)
161 cd05042 PTKc_Aatyk Catalytic d 99.9 2.2E-25 4.7E-30 179.0 16.8 164 5-177 21-215 (269)
162 cd06611 STKc_SLK_like Catalyti 99.9 1.7E-25 3.7E-30 180.6 16.2 161 3-176 27-212 (280)
163 cd05093 PTKc_TrkB Catalytic do 99.9 3E-25 6.5E-30 180.1 17.7 164 4-177 33-228 (288)
164 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.9E-25 4.2E-30 189.4 17.2 163 5-176 66-344 (400)
165 cd06613 STKc_MAP4K3_like Catal 99.9 3.5E-25 7.7E-30 176.7 17.7 164 2-178 24-210 (262)
166 cd07861 STKc_CDK1_euk Catalyti 99.9 9.8E-26 2.1E-30 182.3 14.6 165 2-176 21-206 (285)
167 cd07873 STKc_PCTAIRE1 Catalyti 99.9 9.8E-26 2.1E-30 184.1 14.7 164 2-178 27-211 (301)
168 KOG2345|consensus 99.9 3.5E-26 7.6E-31 175.4 11.1 168 2-173 42-242 (302)
169 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 2.8E-25 6E-30 179.8 17.1 161 4-176 31-214 (283)
170 cd05048 PTKc_Ror Catalytic Dom 99.9 3.5E-25 7.6E-30 179.0 17.5 166 5-179 34-234 (283)
171 cd05094 PTKc_TrkC Catalytic do 99.9 3.9E-25 8.5E-30 179.7 17.9 164 4-177 33-231 (291)
172 cd07867 STKc_CDC2L6 Catalytic 99.9 1.2E-25 2.5E-30 184.6 14.7 163 3-176 25-220 (317)
173 cd06646 STKc_MAP4K5 Catalytic 99.9 1.7E-25 3.7E-30 179.3 15.3 160 2-175 30-212 (267)
174 cd06643 STKc_SLK Catalytic dom 99.9 3.5E-25 7.7E-30 179.0 17.2 162 2-176 26-212 (282)
175 cd06656 STKc_PAK3 Catalytic do 99.9 1.7E-25 3.6E-30 182.6 15.2 159 2-175 40-218 (297)
176 PHA03207 serine/threonine kina 99.9 8.6E-26 1.9E-30 191.2 14.0 155 3-177 116-292 (392)
177 PF07714 Pkinase_Tyr: Protein 99.9 1.2E-25 2.6E-30 180.0 14.0 166 3-179 25-213 (259)
178 KOG4645|consensus 99.9 1.4E-27 2.9E-32 215.9 2.9 165 1-177 1255-1446(1509)
179 cd06628 STKc_MAPKKK_Byr2_like 99.9 2.8E-25 6E-30 178.0 16.0 165 2-176 21-216 (267)
180 cd08216 PK_STRAD Pseudokinase 99.9 3.5E-25 7.6E-30 181.7 16.9 165 3-177 22-215 (314)
181 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 3.9E-25 8.5E-30 177.6 16.8 166 4-178 20-216 (269)
182 KOG4279|consensus 99.9 2E-26 4.2E-31 198.1 9.7 161 2-175 596-781 (1226)
183 cd05072 PTKc_Lyn Catalytic dom 99.9 3.5E-25 7.5E-30 177.0 16.4 161 5-178 29-211 (261)
184 KOG0614|consensus 99.9 1.1E-27 2.4E-32 199.4 1.9 159 9-178 448-625 (732)
185 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 3.6E-25 7.8E-30 179.1 16.5 163 2-175 29-214 (284)
186 cd05114 PTKc_Tec_Rlk Catalytic 99.9 4.2E-25 9.1E-30 176.1 16.6 160 5-178 27-208 (256)
187 cd06653 STKc_MEKK3_like_1 Cata 99.9 4.6E-25 9.9E-30 176.8 16.8 166 2-175 23-212 (264)
188 cd05577 STKc_GRK Catalytic dom 99.9 4E-25 8.7E-30 178.4 16.6 167 2-177 14-199 (277)
189 PF00069 Pkinase: Protein kina 99.9 3.7E-25 8E-30 176.3 16.1 162 2-175 20-202 (260)
190 cd06638 STKc_myosinIIIA Cataly 99.9 3.4E-25 7.3E-30 179.3 16.0 168 2-176 39-233 (286)
191 cd06651 STKc_MEKK3 Catalytic d 99.9 4.1E-25 9E-30 177.2 16.4 166 2-175 23-212 (266)
192 cd06658 STKc_PAK5 Catalytic do 99.9 1.3E-25 2.9E-30 182.9 13.6 161 2-177 43-223 (292)
193 cd05572 STKc_cGK_PKG Catalytic 99.9 5E-25 1.1E-29 176.2 16.7 164 2-176 14-196 (262)
194 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 6.4E-25 1.4E-29 177.2 17.4 160 6-178 44-228 (274)
195 cd05609 STKc_MAST Catalytic do 99.9 6.4E-25 1.4E-29 179.7 17.6 166 2-178 22-222 (305)
196 cd06608 STKc_myosinIII_like Ca 99.9 5.9E-25 1.3E-29 176.3 16.9 166 3-175 28-221 (275)
197 cd06637 STKc_TNIK Catalytic do 99.9 3.9E-25 8.6E-30 177.6 15.7 165 3-176 28-220 (272)
198 cd05633 STKc_GRK3 Catalytic do 99.9 5E-25 1.1E-29 178.3 16.4 165 2-177 15-201 (279)
199 cd06642 STKc_STK25-YSK1 Cataly 99.9 2.7E-25 5.9E-30 179.3 14.8 161 2-176 25-205 (277)
200 PTZ00284 protein kinase; Provi 99.9 3.6E-25 7.8E-30 191.4 16.5 163 2-178 150-351 (467)
201 cd05613 STKc_MSK1_N N-terminal 99.9 4.2E-25 9.1E-30 179.3 16.0 163 3-175 25-211 (290)
202 cd07847 STKc_CDKL1_4 Catalytic 99.9 3.5E-25 7.5E-30 179.0 15.4 165 2-178 22-207 (286)
203 cd06659 STKc_PAK6 Catalytic do 99.9 1.8E-25 3.8E-30 182.5 13.8 160 2-176 42-221 (297)
204 KOG0984|consensus 99.9 1.3E-25 2.7E-30 168.5 11.7 167 2-178 67-258 (282)
205 cd06640 STKc_MST4 Catalytic do 99.9 6.3E-25 1.4E-29 177.3 16.6 161 2-176 25-205 (277)
206 cd06644 STKc_STK10_LOK Catalyt 99.9 9.4E-25 2E-29 177.5 17.6 162 2-176 33-219 (292)
207 KOG0696|consensus 99.9 1.1E-26 2.4E-31 189.7 6.0 173 5-188 373-566 (683)
208 cd05092 PTKc_TrkA Catalytic do 99.9 1E-24 2.2E-29 176.4 17.4 164 4-177 33-230 (280)
209 cd05611 STKc_Rim15_like Cataly 99.9 6E-25 1.3E-29 175.5 15.9 165 2-177 17-198 (260)
210 cd05574 STKc_phototropin_like 99.9 7.5E-25 1.6E-29 180.0 16.8 167 3-178 23-238 (316)
211 cd05090 PTKc_Ror1 Catalytic do 99.9 1E-24 2.2E-29 176.5 17.3 166 3-177 31-232 (283)
212 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 8.1E-25 1.7E-29 175.5 16.6 157 7-176 33-214 (262)
213 cd05578 STKc_Yank1 Catalytic d 99.9 2.8E-25 6E-30 177.3 13.8 166 2-178 21-205 (258)
214 cd07855 STKc_ERK5 Catalytic do 99.9 1.3E-25 2.8E-30 186.1 12.2 166 2-176 26-216 (334)
215 cd05083 PTKc_Chk Catalytic dom 99.9 9.5E-25 2.1E-29 173.9 16.7 160 4-178 27-204 (254)
216 cd05606 STKc_beta_ARK Catalyti 99.9 9.5E-25 2.1E-29 176.5 16.7 163 2-175 15-199 (278)
217 cd08226 PK_STRAD_beta Pseudoki 99.9 8.8E-25 1.9E-29 180.7 16.9 167 2-178 21-216 (328)
218 cd05032 PTKc_InsR_like Catalyt 99.9 6.2E-25 1.3E-29 176.9 15.6 167 4-179 34-229 (277)
219 KOG0662|consensus 99.9 4.6E-26 9.9E-31 167.9 8.1 154 2-167 23-187 (292)
220 cd05068 PTKc_Frk_like Catalyti 99.9 9.3E-25 2E-29 174.6 16.3 161 5-178 29-211 (261)
221 cd05088 PTKc_Tie2 Catalytic do 99.9 1E-24 2.2E-29 178.5 16.9 165 4-177 30-229 (303)
222 cd00192 PTKc Catalytic domain 99.9 1.2E-24 2.6E-29 173.1 16.8 164 5-177 22-213 (262)
223 cd05082 PTKc_Csk Catalytic dom 99.9 8E-25 1.7E-29 174.5 15.8 160 5-177 28-205 (256)
224 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 8.8E-25 1.9E-29 177.0 16.2 164 3-175 23-210 (286)
225 cd05091 PTKc_Ror2 Catalytic do 99.9 1.4E-24 3E-29 175.6 17.2 166 4-178 33-233 (283)
226 cd06630 STKc_MEKK1 Catalytic d 99.9 5.7E-25 1.2E-29 176.2 14.9 164 2-175 21-211 (268)
227 cd06631 STKc_YSK4 Catalytic do 99.9 9.3E-25 2E-29 174.9 16.0 163 4-176 22-212 (265)
228 cd05035 PTKc_Axl_like Catalyti 99.9 1.8E-24 4E-29 173.5 17.7 169 5-177 26-221 (273)
229 KOG0579|consensus 99.9 5.2E-26 1.1E-30 193.9 9.0 156 2-170 53-223 (1187)
230 cd05101 PTKc_FGFR2 Catalytic d 99.9 1.4E-24 3E-29 177.5 17.3 166 5-179 46-247 (304)
231 cd05103 PTKc_VEGFR2 Catalytic 99.9 1.3E-24 2.9E-29 180.8 17.4 166 3-176 34-286 (343)
232 cd06609 STKc_MST3_like Catalyt 99.9 7.1E-25 1.5E-29 176.5 15.2 161 2-176 22-202 (274)
233 cd05033 PTKc_EphR Catalytic do 99.9 2.3E-24 4.9E-29 172.8 17.9 162 5-178 31-215 (266)
234 cd05047 PTKc_Tie Catalytic dom 99.9 1.5E-24 3.2E-29 174.4 16.9 164 4-176 18-216 (270)
235 cd05085 PTKc_Fer Catalytic dom 99.9 2E-24 4.3E-29 171.4 17.5 163 4-178 17-201 (250)
236 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.9E-24 4.1E-29 183.4 18.4 165 4-177 65-347 (401)
237 cd05055 PTKc_PDGFR Catalytic d 99.9 1.2E-24 2.6E-29 178.0 16.6 162 4-176 63-248 (302)
238 cd06639 STKc_myosinIIIB Cataly 99.9 1.2E-24 2.6E-29 176.7 16.5 169 2-177 43-238 (291)
239 cd07839 STKc_CDK5 Catalytic do 99.9 2.2E-25 4.7E-30 180.3 12.0 162 2-175 21-203 (284)
240 cd06624 STKc_ASK Catalytic dom 99.9 1.4E-24 3E-29 174.2 16.6 161 2-175 29-214 (268)
241 cd07860 STKc_CDK2_3 Catalytic 99.9 4.3E-25 9.3E-30 178.5 13.6 165 2-177 21-206 (284)
242 cd07844 STKc_PCTAIRE_like Cata 99.9 5.4E-25 1.2E-29 178.7 14.2 162 2-176 26-208 (291)
243 cd05086 PTKc_Aatyk2 Catalytic 99.9 2.7E-24 5.8E-29 172.9 18.1 161 8-177 24-214 (268)
244 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.2E-24 2.7E-29 176.1 16.2 164 3-178 27-208 (284)
245 cd05111 PTK_HER3 Pseudokinase 99.9 1.7E-24 3.7E-29 175.1 17.0 158 8-178 38-218 (279)
246 cd05059 PTKc_Tec_like Catalyti 99.9 1E-24 2.2E-29 174.0 15.5 160 5-178 27-208 (256)
247 cd05053 PTKc_FGFR Catalytic do 99.9 1.8E-24 4E-29 175.7 17.2 166 5-179 41-242 (293)
248 cd05060 PTKc_Syk_like Catalyti 99.9 1.3E-24 2.8E-29 173.4 15.9 158 6-177 23-204 (257)
249 cd05579 STKc_MAST_like Catalyt 99.9 8.3E-25 1.8E-29 174.4 14.8 164 3-177 15-206 (265)
250 cd05040 PTKc_Ack_like Catalyti 99.9 1.9E-24 4.1E-29 172.2 16.7 160 7-178 24-207 (257)
251 cd05148 PTKc_Srm_Brk Catalytic 99.9 9.9E-25 2.2E-29 174.2 15.1 159 6-176 30-209 (261)
252 cd07832 STKc_CCRK Catalytic do 99.9 1.3E-24 2.9E-29 175.6 15.9 164 2-177 21-206 (286)
253 cd05045 PTKc_RET Catalytic dom 99.9 1.4E-24 3.1E-29 176.3 16.2 164 6-178 30-236 (290)
254 cd06632 STKc_MEKK1_plant Catal 99.9 2E-24 4.3E-29 171.9 16.6 165 2-176 21-206 (258)
255 cd05109 PTKc_HER2 Catalytic do 99.9 1.7E-24 3.6E-29 174.9 16.3 157 8-177 38-217 (279)
256 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.2E-24 2.5E-29 176.3 15.3 161 3-173 30-213 (284)
257 cd06917 STKc_NAK1_like Catalyt 99.9 1.1E-24 2.3E-29 175.6 15.0 161 2-176 22-206 (277)
258 cd05071 PTKc_Src Catalytic dom 99.9 1.7E-24 3.7E-29 173.4 15.9 158 7-178 31-210 (262)
259 cd05113 PTKc_Btk_Bmx Catalytic 99.9 1.7E-24 3.7E-29 172.9 15.8 158 6-177 28-207 (256)
260 cd08218 STKc_Nek1 Catalytic do 99.9 2E-24 4.3E-29 172.0 16.1 164 2-175 21-204 (256)
261 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.7E-24 3.6E-29 173.1 15.7 159 4-176 28-208 (260)
262 cd06636 STKc_MAP4K4_6 Catalyti 99.9 2E-24 4.3E-29 174.6 16.2 165 3-176 38-230 (282)
263 KOG0666|consensus 99.9 2.7E-26 5.9E-31 181.3 5.1 159 8-174 55-242 (438)
264 cd05069 PTKc_Yes Catalytic dom 99.9 1.6E-24 3.5E-29 173.2 15.5 159 6-178 30-210 (260)
265 cd07870 STKc_PFTAIRE2 Catalyti 99.9 1.9E-24 4.2E-29 175.5 16.1 163 2-177 26-209 (291)
266 cd05075 PTKc_Axl Catalytic dom 99.9 3.2E-24 6.9E-29 172.3 17.2 166 8-177 28-220 (272)
267 cd05066 PTKc_EphR_A Catalytic 99.9 2.4E-24 5.2E-29 172.9 16.3 160 6-177 32-215 (267)
268 cd05051 PTKc_DDR Catalytic dom 99.9 3E-24 6.4E-29 174.6 17.1 165 5-178 45-240 (296)
269 cd07836 STKc_Pho85 Catalytic d 99.9 1.5E-24 3.3E-29 175.2 15.2 166 2-178 21-207 (284)
270 cd07850 STKc_JNK Catalytic dom 99.9 2.1E-24 4.6E-29 180.2 16.5 164 2-176 37-221 (353)
271 cd06648 STKc_PAK_II Catalytic 99.9 2.9E-24 6.3E-29 174.3 16.7 159 2-175 40-218 (285)
272 cd05061 PTKc_InsR Catalytic do 99.9 4E-24 8.7E-29 173.6 17.5 164 5-177 35-227 (288)
273 cd05050 PTKc_Musk Catalytic do 99.9 2.3E-24 5E-29 174.8 16.0 167 3-178 32-239 (288)
274 cd05098 PTKc_FGFR1 Catalytic d 99.9 2.5E-24 5.4E-29 176.4 16.3 164 5-177 49-248 (307)
275 cd06617 PKc_MKK3_6 Catalytic d 99.9 2.3E-24 4.9E-29 174.1 15.8 164 2-175 22-210 (283)
276 cd05039 PTKc_Csk_like Catalyti 99.9 4.7E-24 1E-28 170.0 17.4 161 5-178 28-206 (256)
277 cd05099 PTKc_FGFR4 Catalytic d 99.9 3.7E-24 8.1E-29 175.9 17.2 165 5-178 43-243 (314)
278 cd08220 STKc_Nek8 Catalytic do 99.9 3.5E-24 7.6E-29 170.4 16.3 165 2-176 21-205 (256)
279 cd08530 STKc_CNK2-like Catalyt 99.9 3.2E-24 7E-29 170.5 16.0 169 2-178 21-207 (256)
280 cd07841 STKc_CDK7 Catalytic do 99.9 1.7E-24 3.7E-29 176.3 14.7 166 2-177 21-208 (298)
281 KOG1151|consensus 99.9 1.2E-24 2.7E-29 179.2 13.8 172 1-179 483-691 (775)
282 cd07837 STKc_CdkB_plant Cataly 99.9 2.1E-24 4.5E-29 175.4 15.0 170 2-176 22-216 (295)
283 cd05063 PTKc_EphR_A2 Catalytic 99.9 5.5E-24 1.2E-28 170.7 17.3 159 7-177 34-216 (268)
284 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.8E-24 6E-29 171.8 15.5 160 4-177 28-209 (260)
285 cd06641 STKc_MST3 Catalytic do 99.9 4.3E-24 9.3E-29 172.4 16.7 161 2-176 25-205 (277)
286 cd07842 STKc_CDK8_like Catalyt 99.9 1.6E-24 3.4E-29 177.7 14.2 168 5-178 26-222 (316)
287 cd05065 PTKc_EphR_B Catalytic 99.9 6E-24 1.3E-28 170.6 17.4 160 7-178 33-218 (269)
288 cd06607 STKc_TAO Catalytic dom 99.9 4.7E-24 1E-28 174.7 16.8 163 3-176 37-218 (307)
289 cd06612 STKc_MST1_2 Catalytic 99.9 4.6E-24 9.9E-29 169.7 16.3 159 4-177 26-204 (256)
290 cd06626 STKc_MEKK4 Catalytic d 99.9 4E-24 8.7E-29 170.8 16.0 162 2-175 21-209 (264)
291 cd05057 PTKc_EGFR_like Catalyt 99.9 5.7E-24 1.2E-28 171.7 17.1 159 8-179 38-219 (279)
292 cd07846 STKc_CDKL2_3 Catalytic 99.9 1.1E-24 2.5E-29 176.1 12.9 162 3-176 23-205 (286)
293 cd05089 PTKc_Tie1 Catalytic do 99.9 7.6E-24 1.6E-28 172.7 17.8 161 8-177 31-224 (297)
294 cd06605 PKc_MAPKK Catalytic do 99.9 3.2E-24 7E-29 171.5 15.2 162 2-175 22-202 (265)
295 cd05056 PTKc_FAK Catalytic dom 99.9 5.3E-24 1.1E-28 171.1 16.5 159 7-178 35-215 (270)
296 cd06647 STKc_PAK_I Catalytic d 99.9 2.6E-24 5.6E-29 175.3 14.7 159 2-175 40-218 (293)
297 cd07845 STKc_CDK10 Catalytic d 99.9 3.4E-24 7.3E-29 175.7 15.4 168 2-179 28-216 (309)
298 cd05095 PTKc_DDR2 Catalytic do 99.9 9.2E-24 2E-28 172.1 17.8 166 5-179 45-241 (296)
299 cd07849 STKc_ERK1_2_like Catal 99.9 1.8E-24 3.9E-29 179.4 13.8 164 2-176 26-214 (336)
300 cd06629 STKc_MAPKKK_Bck1_like 99.9 4.7E-24 1E-28 171.4 15.8 163 2-174 22-214 (272)
301 cd06657 STKc_PAK4 Catalytic do 99.9 3.1E-24 6.7E-29 174.9 14.9 159 3-176 42-220 (292)
302 cd07865 STKc_CDK9 Catalytic do 99.9 5.9E-24 1.3E-28 173.7 16.4 168 2-177 33-229 (310)
303 cd07843 STKc_CDC2L1 Catalytic 99.9 4.5E-24 9.7E-29 173.5 15.5 166 2-177 26-212 (293)
304 cd05110 PTKc_HER4 Catalytic do 99.9 4.9E-24 1.1E-28 174.4 15.8 157 8-177 38-217 (303)
305 cd05034 PTKc_Src_like Catalyti 99.9 6.3E-24 1.4E-28 169.6 15.9 160 5-177 29-210 (261)
306 cd07833 STKc_CDKL Catalytic do 99.9 2.2E-24 4.8E-29 174.5 13.4 163 2-176 22-206 (288)
307 PHA03211 serine/threonine kina 99.9 1.6E-24 3.4E-29 186.5 13.2 153 2-174 190-364 (461)
308 cd05097 PTKc_DDR_like Catalyti 99.9 9E-24 1.9E-28 172.1 17.0 164 7-179 45-240 (295)
309 cd05100 PTKc_FGFR3 Catalytic d 99.9 6.5E-24 1.4E-28 176.0 16.4 164 7-179 45-244 (334)
310 PLN00009 cyclin-dependent kina 99.9 4.7E-24 1E-28 173.5 15.2 165 2-177 23-209 (294)
311 cd07835 STKc_CDK1_like Catalyt 99.9 4.7E-24 1E-28 172.3 15.1 165 2-177 20-205 (283)
312 cd05576 STKc_RPK118_like Catal 99.9 3E-24 6.4E-29 169.8 13.3 155 2-175 14-185 (237)
313 PHA03390 pk1 serine/threonine- 99.9 6.2E-24 1.3E-28 170.9 15.4 157 2-177 37-211 (267)
314 cd06635 STKc_TAO1 Catalytic do 99.9 1.4E-23 3E-28 172.8 17.8 163 2-175 46-227 (317)
315 cd05041 PTKc_Fes_like Catalyti 99.9 1.2E-23 2.6E-28 167.1 16.8 161 6-178 19-202 (251)
316 cd07880 STKc_p38gamma_MAPK12 C 99.9 7E-24 1.5E-28 176.5 16.1 166 2-177 36-221 (343)
317 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 7.4E-24 1.6E-28 171.0 15.8 163 4-176 31-216 (284)
318 cd05044 PTKc_c-ros Catalytic d 99.9 4.2E-24 9.1E-29 171.3 14.2 164 5-177 25-219 (269)
319 KOG1006|consensus 99.9 2.6E-25 5.6E-30 172.4 6.8 167 2-177 85-274 (361)
320 KOG0196|consensus 99.9 8.9E-25 1.9E-29 189.6 10.9 163 7-181 658-844 (996)
321 cd06623 PKc_MAPKK_plant_like C 99.9 6E-24 1.3E-28 169.7 15.0 162 2-176 22-204 (264)
322 cd05058 PTKc_Met_Ron Catalytic 99.9 1.6E-23 3.5E-28 167.3 17.3 159 5-174 22-205 (262)
323 cd06614 STKc_PAK Catalytic dom 99.9 1.1E-23 2.4E-28 170.6 16.5 161 3-177 41-221 (286)
324 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 9.3E-24 2E-28 168.2 15.7 155 7-176 31-211 (259)
325 cd05043 PTK_Ryk Pseudokinase d 99.9 1.1E-23 2.4E-28 170.0 16.3 164 5-176 34-224 (280)
326 cd06627 STKc_Cdc7_like Catalyt 99.9 1.5E-23 3.3E-28 166.2 16.8 163 2-176 21-203 (254)
327 cd08215 STKc_Nek Catalytic dom 99.9 1.5E-23 3.4E-28 166.3 16.8 167 2-176 21-207 (258)
328 cd05036 PTKc_ALK_LTK Catalytic 99.9 1.4E-23 3.1E-28 169.3 16.8 165 5-178 35-228 (277)
329 cd05046 PTK_CCK4 Pseudokinase 99.9 1E-23 2.3E-28 169.7 15.9 164 5-177 34-224 (275)
330 cd08225 STKc_Nek5 Catalytic do 99.9 7.4E-24 1.6E-28 168.6 14.7 165 2-176 21-206 (257)
331 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 4.4E-24 9.5E-29 170.6 13.4 156 6-174 27-208 (258)
332 PHA03209 serine/threonine kina 99.9 4.4E-24 9.5E-29 178.7 14.0 151 3-173 88-257 (357)
333 KOG1094|consensus 99.9 6.9E-25 1.5E-29 185.3 9.1 167 5-182 561-751 (807)
334 cd05073 PTKc_Hck Catalytic dom 99.9 1.7E-23 3.6E-28 167.4 16.7 159 5-177 29-209 (260)
335 cd06633 STKc_TAO3 Catalytic do 99.9 2.1E-23 4.7E-28 171.4 17.7 164 2-176 42-224 (313)
336 KOG3653|consensus 99.9 2.5E-24 5.5E-29 177.9 11.8 141 4-156 231-390 (534)
337 cd05123 STKc_AGC Catalytic dom 99.9 1.2E-23 2.6E-28 166.7 15.3 164 3-177 15-198 (250)
338 KOG0983|consensus 99.9 1.1E-24 2.4E-29 169.6 8.9 162 3-176 114-298 (391)
339 cd05583 STKc_MSK_N N-terminal 99.9 8.7E-24 1.9E-28 171.4 14.7 162 3-174 25-210 (288)
340 cd07877 STKc_p38alpha_MAPK14 C 99.9 1.3E-23 2.8E-28 175.1 15.7 166 2-177 38-223 (345)
341 cd07858 STKc_TEY_MAPK_plant Ca 99.9 6.1E-24 1.3E-28 176.4 13.6 166 2-176 26-213 (337)
342 cd05074 PTKc_Tyro3 Catalytic d 99.9 3.4E-23 7.5E-28 166.4 17.4 170 4-177 25-221 (273)
343 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1.2E-23 2.6E-28 174.1 15.0 162 2-176 31-210 (328)
344 cd07852 STKc_MAPK15 Catalytic 99.9 1.6E-23 3.5E-28 173.7 15.7 165 2-178 28-219 (337)
345 smart00219 TyrKc Tyrosine kina 99.9 3.1E-23 6.8E-28 164.8 16.7 160 6-176 28-209 (258)
346 cd05112 PTKc_Itk Catalytic dom 99.9 2E-23 4.4E-28 166.2 15.4 160 5-178 27-208 (256)
347 cd06610 STKc_OSR1_SPAK Catalyt 99.9 2.3E-23 5E-28 166.5 15.8 165 3-177 23-212 (267)
348 KOG0695|consensus 99.9 9.2E-25 2E-29 174.6 7.5 161 3-174 272-453 (593)
349 PTZ00024 cyclin-dependent prot 99.9 2.2E-23 4.7E-28 172.7 15.9 166 2-178 30-240 (335)
350 cd08528 STKc_Nek10 Catalytic d 99.9 4.9E-23 1.1E-27 165.2 17.2 168 5-177 25-218 (269)
351 cd05122 PKc_STE Catalytic doma 99.9 3.2E-23 7E-28 163.7 15.4 160 3-175 22-200 (253)
352 KOG0669|consensus 99.9 2.6E-25 5.6E-30 171.5 3.1 171 3-181 39-238 (376)
353 cd07857 STKc_MPK1 Catalytic do 99.9 2.5E-23 5.4E-28 172.3 15.2 162 6-176 27-214 (332)
354 cd06606 STKc_MAPKKK Catalytic 99.9 3.7E-23 8.1E-28 164.0 15.6 165 2-176 21-207 (260)
355 cd07864 STKc_CDK12 Catalytic d 99.9 2.3E-23 5E-28 169.8 14.7 167 2-176 28-222 (302)
356 KOG1035|consensus 99.9 2.5E-24 5.3E-29 194.0 9.2 146 2-155 500-786 (1351)
357 cd06616 PKc_MKK4 Catalytic dom 99.9 3E-23 6.6E-28 168.1 14.9 166 2-176 25-214 (288)
358 cd07834 STKc_MAPK Catalytic do 99.9 1.7E-23 3.6E-28 172.9 13.5 169 2-179 21-214 (330)
359 cd05581 STKc_PDK1 Catalytic do 99.9 2E-23 4.3E-28 168.0 13.5 165 2-177 22-227 (280)
360 cd07879 STKc_p38delta_MAPK13 C 99.9 2.2E-23 4.7E-28 173.4 13.9 164 2-176 36-219 (342)
361 cd05610 STKc_MASTL Catalytic d 99.9 2.8E-23 6.2E-28 186.4 15.6 143 2-155 25-175 (669)
362 cd06634 STKc_TAO2 Catalytic do 99.9 6.4E-23 1.4E-27 168.2 16.5 163 2-175 36-217 (308)
363 cd07840 STKc_CDK9_like Catalyt 99.9 4.1E-23 8.9E-28 166.7 15.0 166 2-177 20-207 (287)
364 KOG0670|consensus 99.9 3.3E-24 7.2E-29 179.2 7.8 167 2-181 453-644 (752)
365 cd07831 STKc_MOK Catalytic dom 99.9 6.9E-23 1.5E-27 165.2 15.4 164 2-177 20-204 (282)
366 KOG2052|consensus 99.9 1E-23 2.2E-28 173.3 10.4 142 3-156 231-392 (513)
367 cd07866 STKc_BUR1 Catalytic do 99.9 3.8E-23 8.2E-28 169.0 13.8 169 2-178 29-233 (311)
368 cd05118 STKc_CMGC Catalytic do 99.9 4.2E-23 9.2E-28 166.4 13.9 164 2-177 20-204 (283)
369 KOG1152|consensus 99.9 5.5E-24 1.2E-28 179.7 8.9 163 1-173 581-770 (772)
370 cd07838 STKc_CDK4_6_like Catal 99.9 1.1E-22 2.4E-27 164.3 16.2 169 3-178 21-212 (287)
371 KOG1095|consensus 99.9 3E-23 6.4E-28 187.5 13.7 166 7-181 723-914 (1025)
372 cd07854 STKc_MAPK4_6 Catalytic 99.9 3.2E-23 7E-28 172.4 12.8 164 2-177 26-224 (342)
373 KOG4257|consensus 99.9 1.9E-23 4.1E-28 177.9 11.5 154 8-174 420-595 (974)
374 cd07851 STKc_p38 Catalytic dom 99.9 4.1E-23 8.8E-28 171.9 12.6 166 2-177 36-221 (343)
375 cd07829 STKc_CDK_like Catalyti 99.9 9E-23 2E-27 164.5 14.2 164 2-177 20-204 (282)
376 KOG0587|consensus 99.9 7E-23 1.5E-27 179.7 14.4 163 2-173 40-229 (953)
377 cd07830 STKc_MAK_like Catalyti 99.9 1.4E-22 3E-27 163.7 15.2 163 3-177 21-204 (283)
378 PHA03210 serine/threonine kina 99.9 6.9E-23 1.5E-27 178.5 13.8 141 25-172 206-368 (501)
379 cd06618 PKc_MKK7 Catalytic dom 99.9 2.2E-22 4.7E-27 164.0 15.4 160 4-175 38-221 (296)
380 KOG0671|consensus 99.9 3.1E-23 6.7E-28 167.6 9.9 164 2-179 110-316 (415)
381 KOG0603|consensus 99.9 2E-23 4.4E-28 178.0 8.0 158 2-178 343-519 (612)
382 KOG4278|consensus 99.9 6.6E-23 1.4E-27 174.8 9.3 158 7-177 293-472 (1157)
383 PHA02882 putative serine/threo 99.9 2.1E-21 4.6E-26 158.3 17.8 139 32-177 73-238 (294)
384 PLN00113 leucine-rich repeat r 99.9 2.4E-22 5.3E-27 187.4 13.7 152 3-174 712-880 (968)
385 cd08222 STKc_Nek11 Catalytic d 99.9 5.8E-22 1.2E-26 158.3 13.8 165 5-176 24-209 (260)
386 KOG0665|consensus 99.9 1.4E-23 3.1E-28 166.2 4.4 165 1-176 36-221 (369)
387 KOG1027|consensus 99.9 5.7E-23 1.2E-27 179.5 8.3 160 4-177 531-720 (903)
388 KOG0596|consensus 99.9 2.1E-22 4.6E-27 169.4 10.8 157 6-175 385-575 (677)
389 smart00220 S_TKc Serine/Threon 99.9 1.2E-21 2.6E-26 153.6 13.7 160 3-175 11-189 (244)
390 KOG0664|consensus 99.9 4.6E-24 9.9E-29 166.4 -1.8 158 1-167 73-243 (449)
391 PRK09188 serine/threonine prot 99.9 6.6E-21 1.4E-25 158.6 12.7 132 5-156 43-192 (365)
392 KOG0668|consensus 99.9 2.7E-21 5.9E-26 147.4 8.9 159 2-178 59-239 (338)
393 smart00221 STYKc Protein kinas 99.9 3.6E-20 7.9E-25 144.0 15.6 159 4-174 22-202 (225)
394 KOG1290|consensus 99.9 5.4E-21 1.2E-25 158.9 11.1 117 2-128 99-224 (590)
395 KOG0199|consensus 99.8 2.3E-21 4.9E-26 167.1 8.1 162 8-181 140-325 (1039)
396 KOG0576|consensus 99.8 8.3E-22 1.8E-26 168.8 2.0 140 2-155 36-183 (829)
397 KOG0200|consensus 99.8 1E-19 2.2E-24 161.6 13.3 162 6-176 328-526 (609)
398 KOG1345|consensus 99.8 1.8E-20 3.8E-25 146.1 7.4 157 2-173 45-226 (378)
399 cd05147 RIO1_euk RIO kinase fa 99.8 8.6E-20 1.9E-24 139.8 11.1 124 5-141 20-166 (190)
400 cd00180 PKc Catalytic domain o 99.8 7.5E-19 1.6E-23 134.3 15.1 141 4-156 16-165 (215)
401 KOG1025|consensus 99.8 4.9E-20 1.1E-24 161.3 7.4 161 7-180 726-909 (1177)
402 PLN03224 probable serine/threo 99.8 5.4E-19 1.2E-23 152.9 13.6 150 4-155 184-381 (507)
403 cd05145 RIO1_like RIO kinase f 99.8 6.8E-19 1.5E-23 134.9 12.4 125 5-142 20-167 (190)
404 PRK10345 hypothetical protein; 99.8 9.4E-19 2E-23 135.7 12.7 122 3-139 22-156 (210)
405 PLN03225 Serine/threonine-prot 99.8 8.1E-19 1.7E-23 154.6 11.3 96 58-155 207-328 (566)
406 PLN00181 protein SPA1-RELATED; 99.8 2.7E-19 5.7E-24 163.9 6.2 133 36-174 26-217 (793)
407 PRK12274 serine/threonine prot 99.8 1.2E-17 2.5E-22 128.2 13.0 152 5-177 24-212 (218)
408 KOG1167|consensus 99.8 2.2E-18 4.9E-23 141.0 9.5 117 5-140 63-181 (418)
409 KOG1163|consensus 99.7 1.8E-17 4E-22 127.5 10.6 161 2-178 36-227 (341)
410 PRK10359 lipopolysaccharide co 99.7 4.5E-17 9.7E-22 127.2 11.3 121 5-141 53-183 (232)
411 KOG1164|consensus 99.7 1.3E-16 2.9E-21 131.8 13.4 158 7-176 45-241 (322)
412 smart00090 RIO RIO-like kinase 99.7 8.7E-17 1.9E-21 127.2 10.1 125 2-141 50-197 (237)
413 PRK14879 serine/threonine prot 99.7 7.1E-16 1.5E-20 119.7 13.2 122 5-141 18-143 (211)
414 KOG1165|consensus 99.7 3.8E-16 8.3E-21 125.1 9.6 159 2-176 49-240 (449)
415 PRK01723 3-deoxy-D-manno-octul 99.7 1.5E-15 3.3E-20 120.3 12.5 126 6-142 55-192 (239)
416 TIGR03724 arch_bud32 Kae1-asso 99.7 1.5E-15 3.3E-20 116.8 11.9 120 4-141 15-138 (199)
417 COG0515 SPS1 Serine/threonine 99.6 9.7E-15 2.1E-19 118.1 14.5 163 7-177 23-216 (384)
418 cd05144 RIO2_C RIO kinase fami 99.6 2.6E-15 5.5E-20 115.7 10.3 118 4-141 37-174 (198)
419 KOG1266|consensus 99.6 2.9E-16 6.3E-21 125.7 4.3 157 1-157 86-255 (458)
420 KOG0590|consensus 99.6 3.2E-16 6.9E-21 138.5 4.6 141 29-180 368-533 (601)
421 KOG4158|consensus 99.6 2.7E-15 5.8E-20 123.0 8.7 127 40-174 274-459 (598)
422 PRK09605 bifunctional UGMP fam 99.6 9.6E-15 2.1E-19 128.5 12.7 97 26-141 380-476 (535)
423 smart00750 KIND kinase non-cat 99.5 2.3E-14 5.1E-19 107.9 8.9 93 71-176 1-108 (176)
424 KOG0603|consensus 99.5 1.2E-15 2.5E-20 130.9 1.9 158 5-174 21-193 (612)
425 KOG1024|consensus 99.5 2.4E-13 5.3E-18 111.3 11.9 154 23-181 328-508 (563)
426 cd05120 APH_ChoK_like Aminogly 99.5 1.1E-13 2.4E-18 100.8 8.5 115 6-141 21-138 (155)
427 cd05119 RIO RIO kinase family, 99.5 2.8E-13 6E-18 103.2 10.2 120 5-142 20-164 (187)
428 PF14531 Kinase-like: Kinase-l 99.5 1.9E-13 4.1E-18 110.0 9.3 174 2-179 33-257 (288)
429 KOG0195|consensus 99.4 7.6E-14 1.6E-18 109.5 3.9 166 4-177 211-394 (448)
430 KOG1166|consensus 99.4 4.6E-13 1E-17 121.9 5.4 140 5-161 721-882 (974)
431 cd05146 RIO3_euk RIO kinase fa 99.4 7.2E-12 1.6E-16 95.9 11.2 96 31-142 75-174 (197)
432 TIGR01982 UbiB 2-polyprenylphe 99.3 8.2E-12 1.8E-16 107.1 9.9 73 61-141 233-306 (437)
433 PRK15123 lipopolysaccharide co 99.3 1.5E-10 3.3E-15 93.0 14.6 133 5-141 44-194 (268)
434 cd05151 ChoK Choline Kinase (C 99.3 2E-11 4.2E-16 91.4 7.5 113 5-141 20-136 (170)
435 PRK04750 ubiB putative ubiquin 99.2 2.5E-11 5.4E-16 105.9 7.9 72 61-141 236-313 (537)
436 KOG1243|consensus 99.2 1.1E-10 2.4E-15 101.6 11.5 120 3-141 34-154 (690)
437 COG3642 Mn2+-dependent serine/ 99.2 9.6E-11 2.1E-15 87.6 9.3 118 6-141 19-140 (204)
438 KOG1023|consensus 99.2 4.3E-11 9.3E-16 102.4 7.6 137 36-181 1-167 (484)
439 KOG1240|consensus 99.2 8.1E-12 1.8E-16 113.4 2.6 138 5-155 46-198 (1431)
440 PF01163 RIO1: RIO1 family; I 99.2 1.6E-10 3.5E-15 88.0 9.2 122 4-142 8-156 (188)
441 KOG3087|consensus 99.1 4.8E-10 1E-14 83.8 10.2 131 3-141 27-165 (229)
442 PF06293 Kdo: Lipopolysacchari 99.1 1.3E-09 2.9E-14 84.5 11.8 110 26-141 55-170 (206)
443 KOG1033|consensus 99.0 3.8E-11 8.3E-16 101.6 0.1 90 60-155 330-433 (516)
444 KOG3741|consensus 99.0 1.7E-09 3.7E-14 92.0 9.2 131 3-139 298-440 (655)
445 KOG0590|consensus 99.0 6.8E-11 1.5E-15 104.9 0.1 161 8-179 48-237 (601)
446 cd05154 ACAD10_11_like Acyl-Co 99.0 1.8E-09 3.9E-14 83.9 6.8 128 5-141 21-206 (223)
447 KOG0606|consensus 98.9 7.6E-10 1.7E-14 100.5 3.9 79 100-180 153-266 (1205)
448 PRK09902 hypothetical protein; 98.8 7.7E-08 1.7E-12 74.2 10.8 132 6-141 41-179 (216)
449 PF06176 WaaY: Lipopolysacchar 98.7 1.5E-07 3.2E-12 73.0 9.5 66 61-141 118-183 (229)
450 COG0478 RIO-like serine/threon 98.6 1.2E-07 2.7E-12 75.1 6.5 117 4-140 113-250 (304)
451 COG0661 AarF Predicted unusual 98.6 1.4E-07 3E-12 82.2 7.1 69 61-141 241-314 (517)
452 KOG0601|consensus 98.5 8.8E-08 1.9E-12 82.6 5.0 126 3-140 288-415 (524)
453 KOG0601|consensus 98.5 1.3E-07 2.8E-12 81.6 4.4 143 3-157 140-301 (524)
454 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 3.3E-06 7.3E-11 66.4 10.0 125 6-141 22-182 (226)
455 PF12260 PIP49_C: Protein-kina 98.3 2.6E-06 5.5E-11 65.1 7.8 103 30-141 7-111 (188)
456 COG1718 RIO1 Serine/threonine 98.3 7.5E-06 1.6E-10 64.5 9.1 95 31-141 117-215 (268)
457 KOG0606|consensus 98.2 7.5E-07 1.6E-11 81.6 3.4 114 59-178 877-1041(1205)
458 PF01636 APH: Phosphotransfera 98.2 1.4E-05 3.1E-10 62.3 9.0 128 7-141 21-197 (239)
459 cd05150 APH Aminoglycoside 3'- 98.0 5.4E-05 1.2E-09 60.0 10.2 31 111-141 163-193 (244)
460 COG4248 Uncharacterized protei 98.0 8.2E-05 1.8E-09 62.8 10.0 114 60-175 84-225 (637)
461 cd05155 APH_ChoK_like_1 Unchar 97.9 7.8E-05 1.7E-09 58.8 9.3 31 111-141 164-194 (235)
462 PLN02876 acyl-CoA dehydrogenas 97.9 4.2E-05 9.2E-10 71.0 8.6 62 7-72 66-130 (822)
463 KOG2270|consensus 97.7 0.00028 6E-09 58.9 9.2 121 3-138 165-310 (520)
464 TIGR02721 ycfN_thiK thiamine k 97.7 0.00012 2.5E-09 58.6 6.9 29 112-141 147-175 (256)
465 KOG1235|consensus 97.7 0.00032 7E-09 61.5 9.7 74 61-141 277-354 (538)
466 COG5072 ALK1 Serine/threonine 97.6 0.00015 3.2E-09 60.3 6.5 84 56-150 296-379 (488)
467 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0017 3.8E-08 50.0 11.4 94 27-135 56-165 (199)
468 KOG2268|consensus 97.6 0.00012 2.6E-09 60.1 4.9 94 28-141 156-251 (465)
469 cd05153 HomoserineK_II Homoser 97.4 0.00049 1.1E-08 56.1 6.7 31 111-141 175-205 (296)
470 COG3173 Predicted aminoglycosi 97.3 0.002 4.4E-08 53.1 9.4 31 111-141 198-228 (321)
471 PRK05231 homoserine kinase; Pr 97.3 0.0095 2.1E-07 49.1 12.9 31 111-141 187-217 (319)
472 cd05156 ChoK_euk Choline Kinas 97.3 0.002 4.3E-08 52.7 8.7 31 111-141 179-213 (302)
473 KOG2137|consensus 97.2 0.00022 4.8E-09 63.3 2.4 67 90-157 99-182 (700)
474 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.003 6.6E-08 51.2 8.2 31 111-141 185-216 (276)
475 PRK10593 hypothetical protein; 97.0 0.0069 1.5E-07 49.7 9.7 46 27-73 52-100 (297)
476 COG2112 Predicted Ser/Thr prot 97.0 0.005 1.1E-07 46.4 8.0 111 4-141 43-155 (201)
477 PRK06148 hypothetical protein; 96.9 0.031 6.7E-07 53.4 14.5 31 111-141 203-236 (1013)
478 PLN02236 choline kinase 96.9 0.0049 1.1E-07 51.6 8.0 30 112-141 201-231 (344)
479 PRK09550 mtnK methylthioribose 96.9 0.021 4.5E-07 48.8 11.7 29 111-140 223-251 (401)
480 PF07387 Seadorna_VP7: Seadorn 96.8 0.0033 7.1E-08 49.2 5.7 85 28-137 104-188 (308)
481 KOG0576|consensus 96.7 0.00081 1.8E-08 59.6 1.9 114 28-155 279-401 (829)
482 cd05610 STKc_MASTL Catalytic d 96.6 0.0015 3.2E-08 59.6 2.8 65 114-178 499-586 (669)
483 PLN02756 S-methyl-5-thioribose 96.5 0.024 5.2E-07 48.5 9.5 28 111-139 230-257 (418)
484 KOG1236|consensus 96.1 0.042 9.2E-07 46.9 8.5 60 62-127 321-380 (565)
485 PF13095 FTA2: Kinetochore Sim 96.1 0.053 1.2E-06 41.8 8.4 91 25-139 97-206 (207)
486 COG0510 ycfN Thiamine kinase a 95.8 0.029 6.2E-07 45.4 6.1 47 95-141 137-183 (269)
487 TIGR01767 MTRK 5-methylthiorib 95.6 0.09 1.9E-06 44.3 8.6 29 111-140 192-220 (370)
488 cd05157 ETNK_euk Ethanolamine 95.6 0.023 4.9E-07 44.6 4.9 31 111-141 170-201 (235)
489 TIGR00938 thrB_alt homoserine 95.6 0.026 5.6E-07 46.4 5.3 31 111-141 187-217 (307)
490 PF07914 DUF1679: Protein of u 95.5 0.016 3.4E-07 49.8 3.8 28 112-139 269-301 (414)
491 PF03881 Fructosamin_kin: Fruc 95.5 0.1 2.2E-06 42.6 8.3 26 112-137 189-214 (288)
492 KOG1035|consensus 95.4 0.033 7.2E-07 52.9 5.7 110 26-141 226-340 (1351)
493 TIGR02906 spore_CotS spore coa 95.4 0.045 9.7E-07 44.8 6.0 30 111-141 187-216 (313)
494 PRK10271 thiK thiamine kinase; 95.1 0.021 4.6E-07 43.5 3.1 29 112-141 78-106 (188)
495 PTZ00384 choline kinase; Provi 94.7 0.22 4.7E-06 42.4 8.3 29 112-141 228-256 (383)
496 PF01633 Choline_kinase: Choli 94.3 0.057 1.2E-06 41.7 3.8 30 112-141 144-174 (211)
497 TIGR02904 spore_ysxE spore coa 94.3 0.082 1.8E-06 43.5 4.8 31 111-141 196-226 (309)
498 PHA03111 Ser/Thr kinase; Provi 94.2 0.1 2.3E-06 43.3 5.1 53 89-141 278-350 (444)
499 COG2334 Putative homoserine ki 94.1 0.093 2E-06 43.7 4.8 29 113-141 199-228 (331)
500 PF04655 APH_6_hur: Aminoglyco 94.0 0.13 2.8E-06 41.2 5.4 63 3-77 23-86 (253)
No 1
>KOG0595|consensus
Probab=100.00 E-value=1.8e-37 Score=251.49 Aligned_cols=168 Identities=22% Similarity=0.291 Sum_probs=146.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
++.+|..||||.+... .......+.+..||.+|+.++|||||.+++++.+.+ ++|+|||||.||+|.+|++.+.
T Consensus 31 h~~~~~~VAIK~i~~~--~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~----~i~lVMEyC~gGDLs~yi~~~~ 104 (429)
T KOG0595|consen 31 HKKSGTEVAIKCIAKK--KLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD----FIYLVMEYCNGGDLSDYIRRRG 104 (429)
T ss_pred eccCCceEEeeeehhh--ccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC----eEEEEEEeCCCCCHHHHHHHcC
Confidence 4578899999999854 224677888999999999999999999999998865 6999999999999999999875
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC------CcEEEeecCcccc-------ccCCCcc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN------GLVKIGCDTYTHT-------IENKKYL 148 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~------~~~ki~dfg~~~~-------~~~~~t~ 148 (218)
+ +++.+++.++.||+.||.+||+ ++||||||||+|||++.. -.+||+|||+++. .+.+|++
T Consensus 105 ~----l~e~t~r~Fm~QLA~alq~L~~--~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSp 178 (429)
T KOG0595|consen 105 R----LPEATARHFMQQLASALQFLHE--NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSP 178 (429)
T ss_pred C----CCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCc
Confidence 4 9999999999999999999999 889999999999999765 5689999999987 6789999
Q ss_pred cccccccCC--CCch----------hhhhhhCCCCCCcchhhhhH
Q psy238 149 SATRQTYGR--PISG----------QYEIVTKTNNVTEKKKEKEE 181 (218)
Q Consensus 149 ~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ee~~ 181 (218)
-|||||+.. .++. +|++++|+.||+....+|-.
T Consensus 179 lYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~ 223 (429)
T KOG0595|consen 179 LYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELL 223 (429)
T ss_pred cccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHH
Confidence 999999842 3333 79999999999977666543
No 2
>KOG0615|consensus
Probab=100.00 E-value=7.6e-37 Score=248.03 Aligned_cols=167 Identities=21% Similarity=0.251 Sum_probs=139.3
Q ss_pred CCCCCCcEEEEEEeeccccccc---HHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHH
Q psy238 1 MDTEEGVEVVWNEVQFSERKNF---KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~---~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l 77 (218)
+++.||+.||||+++....... ......+.+|+++|++++|||||+++++|..+. ..||||||+.||.|.+++
T Consensus 192 ~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d----s~YmVlE~v~GGeLfd~v 267 (475)
T KOG0615|consen 192 YEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD----SSYMVLEYVEGGELFDKV 267 (475)
T ss_pred EEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC----ceEEEEEEecCccHHHHH
Confidence 3578999999999986432221 123445789999999999999999999998876 479999999999999999
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC---CcEEEeecCcccc-------ccCCCc
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN---GLVKIGCDTYTHT-------IENKKY 147 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~---~~~ki~dfg~~~~-------~~~~~t 147 (218)
.... .+.+.....++.|++.|+.|||+ +||+||||||+|||+..+ ..+||+|||++.. .+.+||
T Consensus 268 v~nk----~l~ed~~K~~f~Qll~avkYLH~--~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGT 341 (475)
T KOG0615|consen 268 VANK----YLREDLGKLLFKQLLTAVKYLHS--QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGT 341 (475)
T ss_pred Hhcc----ccccchhHHHHHHHHHHHHHHHH--cCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCC
Confidence 8764 48888999999999999999999 889999999999999765 8999999999875 688999
Q ss_pred ccccccccC----CCCch-----------hhhhhhCCCCCCcchh
Q psy238 148 LSATRQTYG----RPISG-----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 148 ~~y~aPE~~----~~~~~-----------~~ei~tg~~p~~~~~~ 177 (218)
+.|.|||+. ...++ +|-++||-.||.+...
T Consensus 342 psYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~ 386 (475)
T KOG0615|consen 342 PSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT 386 (475)
T ss_pred ccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC
Confidence 999999972 22222 6778899999975443
No 3
>KOG0598|consensus
Probab=100.00 E-value=3.2e-36 Score=241.70 Aligned_cols=175 Identities=18% Similarity=0.241 Sum_probs=149.3
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..||+.||+|+++...... ........+|..||..++||+||.++..|++.. ++|||++|+.||.|...|.+.+
T Consensus 47 ~dt~kiYAmKvl~K~~iv~-~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~----kLylVld~~~GGeLf~hL~~eg- 120 (357)
T KOG0598|consen 47 KDTGKIYAMKVLKKKKIVE-KKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE----KLYLVLDYLNGGELFYHLQREG- 120 (357)
T ss_pred cccCceeehhhhhhhHhhh-hhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC----eEEEEEeccCCccHHHHHHhcC-
Confidence 4689999999998643332 345678899999999999999999999997754 6999999999999999999764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
.++++.++.|+..|+.||.|||+ .|||||||||+|||+|.+|+++|+|||++.. .+.+||+.|||||
T Consensus 121 ---~F~E~~arfYlaEi~lAL~~LH~--~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPE 195 (357)
T KOG0598|consen 121 ---RFSEDRARFYLAEIVLALGYLHS--KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPE 195 (357)
T ss_pred ---CcchhHHHHHHHHHHHHHHHHHh--CCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChH
Confidence 49999999999999999999999 7799999999999999999999999999874 5679999999999
Q ss_pred c--CCCCch----------hhhhhhCCCCCCcchhhhhHHHHHHHH
Q psy238 155 Y--GRPISG----------QYEIVTKTNNVTEKKKEKEEEEEEEKK 188 (218)
Q Consensus 155 ~--~~~~~~----------~~ei~tg~~p~~~~~~ee~~~~~~~~~ 188 (218)
+ ..+++. +|||++|.+||.+....+..+.-...+
T Consensus 196 il~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k 241 (357)
T KOG0598|consen 196 ILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK 241 (357)
T ss_pred HHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc
Confidence 7 223222 799999999999888766655544433
No 4
>KOG0581|consensus
Probab=100.00 E-value=1.7e-35 Score=237.60 Aligned_cols=163 Identities=21% Similarity=0.246 Sum_probs=142.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..||..+|+|.+.. .........+.+|++++..++||+||.+|+.|.+.+. .++++||||++|||++++...
T Consensus 100 Hk~t~~i~AlK~I~~---~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~- 172 (364)
T KOG0581|consen 100 HKPTGKIYALKVILL---NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRV- 172 (364)
T ss_pred EcCCCeEEEEEeecc---cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhc-
Confidence 567999999999964 3347788899999999999999999999999988652 499999999999999999876
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
+++++...-.++.+|+.||.|||.. ++||||||||+|||++..|.+||||||.+.. .+..||..|||||.
T Consensus 173 ---g~i~E~~L~~ia~~VL~GL~YLh~~-~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPER 248 (364)
T KOG0581|consen 173 ---GRIPEPVLGKIARAVLRGLSYLHEE-RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPER 248 (364)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhhc-cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhh
Confidence 3499999999999999999999952 5699999999999999999999999999876 78899999999996
Q ss_pred --CCCCch----------hhhhhhCCCCCCcc
Q psy238 156 --GRPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 156 --~~~~~~----------~~ei~tg~~p~~~~ 175 (218)
+..++. +.|+++|+.||...
T Consensus 249 i~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 249 ISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred hcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 333333 68999999999764
No 5
>KOG0575|consensus
Probab=100.00 E-value=1.5e-35 Score=250.31 Aligned_cols=168 Identities=27% Similarity=0.303 Sum_probs=147.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|++..+... .....+.+.+||+|.+.|.|||||+++++|+++. ++|||+|+|..++|..++..+
T Consensus 39 ~~~tge~~A~KvVpk~~l~-k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~----nVYivLELC~~~sL~el~Krr- 112 (592)
T KOG0575|consen 39 DLDTGEVVAVKVVPKKLLK-KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN----NVYIVLELCHRGSLMELLKRR- 112 (592)
T ss_pred EcCCCcEEEEEEeehHHhc-CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC----ceEEEEEecCCccHHHHHHhc-
Confidence 5789999999999964333 3667889999999999999999999999999876 599999999999999999955
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.++++..++.+++||+.||.|||+ ++|+|||||..|+|++++.++||+|||+|.. .+.+||+.|+||
T Consensus 113 ---k~ltEpEary~l~QIv~GlkYLH~--~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAP 187 (592)
T KOG0575|consen 113 ---KPLTEPEARYFLRQIVEGLKYLHS--LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAP 187 (592)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHHHHh--cCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccCh
Confidence 459999999999999999999999 7799999999999999999999999999987 678999999999
Q ss_pred ccCC------------CCchhhhhhhCCCCCCcchhhhh
Q psy238 154 TYGR------------PISGQYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 154 E~~~------------~~~~~~ei~tg~~p~~~~~~ee~ 180 (218)
|+.. ....+|-++.|++||..+.-++.
T Consensus 188 EVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket 226 (592)
T KOG0575|consen 188 EVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET 226 (592)
T ss_pred hHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH
Confidence 9722 11228999999999987755544
No 6
>KOG0616|consensus
Probab=100.00 E-value=2.9e-34 Score=224.57 Aligned_cols=167 Identities=18% Similarity=0.246 Sum_probs=144.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..+|+|+++...... ....+...+|..+|+.+.||+++.+++.|.+.. ++||||+|++||-|.++++..+
T Consensus 65 ~k~~g~yYAmKvL~k~~vVk-lKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~----~lymvmeyv~GGElFS~Lrk~~ 139 (355)
T KOG0616|consen 65 EKHSGNYYAMKVLDKQKVVK-LKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS----NLYMVMEYVPGGELFSYLRKSG 139 (355)
T ss_pred EccCCceeehhhcCHHHHHH-HHHHHHHhhHHHHHhhccCceeEEEEEeeccCC----eEEEEEeccCCccHHHHHHhcC
Confidence 35688999999998643332 456778899999999999999999999998765 6999999999999999999875
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
+++++.++.++.||+.||+|||+ .+|++|||||+|||+|.+|.++|+|||++.. .+.+||+.|+|||+.
T Consensus 140 ----rF~e~~arFYAAeivlAleylH~--~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii 213 (355)
T KOG0616|consen 140 ----RFSEPHARFYAAEIVLALEYLHS--LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEII 213 (355)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHh--cCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHh
Confidence 49999999999999999999999 5599999999999999999999999999875 678999999999962
Q ss_pred C--------CCch----hhhhhhCCCCCCcchhhh
Q psy238 157 R--------PISG----QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 157 ~--------~~~~----~~ei~tg~~p~~~~~~ee 179 (218)
. .++. .|||+.|..||.....-.
T Consensus 214 ~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 214 QSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred hcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 1 2222 699999999998766533
No 7
>KOG0192|consensus
Probab=100.00 E-value=1.8e-33 Score=233.55 Aligned_cols=165 Identities=25% Similarity=0.359 Sum_probs=140.9
Q ss_pred CCCcE-EEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVE-VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~-vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..|.. ||||++....... .....+.+|+.+|.+++|||||+++|++..... .+++||||+++|+|.+++...
T Consensus 62 ~~g~~~vavK~~~~~~~~~--~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---~~~iVtEy~~~GsL~~~l~~~-- 134 (362)
T KOG0192|consen 62 WRGTDVVAVKIISDPDFDD--ESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---SLCIVTEYMPGGSLSVLLHKK-- 134 (362)
T ss_pred eCCceeEEEEEecchhcCh--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---ceEEEEEeCCCCcHHHHHhhc--
Confidence 45777 9999998543322 227899999999999999999999999987541 489999999999999999884
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-cccCCCCCCcEEEecCC-cEEEeecCcccc--------ccCCCcccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPP-IIHGNLTCDTIFIQHNG-LVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~-iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
....+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++ ++||+|||+++. ....||+.|||
T Consensus 135 ~~~~l~~~~~l~~aldiArGm~YLH~--~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMA 212 (362)
T KOG0192|consen 135 RKRKLPLKVRLRIALDIARGMEYLHS--EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMA 212 (362)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhc--CCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccC
Confidence 22569999999999999999999999 77 99999999999999997 999999999965 22689999999
Q ss_pred cccCC----CCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYGR----PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~----~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+.. .++. ++||+||+.||.....
T Consensus 213 PEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~ 251 (362)
T KOG0192|consen 213 PEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP 251 (362)
T ss_pred hhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence 99855 2333 7999999999987665
No 8
>KOG0611|consensus
Probab=100.00 E-value=6.8e-34 Score=231.14 Aligned_cols=164 Identities=21% Similarity=0.370 Sum_probs=146.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+-..|+.||||.+......+ ......+.+||+||+.++||||+.+|.+|...+ .+.+||||..+|.|.+|+..+.
T Consensus 74 e~~sgR~VAiKsIrKdkIkd-eqDlvhIRREIeIMSsLNHPhII~IyEVFENkd----KIvivMEYaS~GeLYDYiSer~ 148 (668)
T KOG0611|consen 74 EHKSGREVAIKSIRKDKIKD-EQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD----KIVIVMEYASGGELYDYISERG 148 (668)
T ss_pred hccCCcEeehhhhhhhhccc-HHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc----eEEEEEEecCCccHHHHHHHhc
Confidence 34679999999998544333 567778999999999999999999999997765 5999999999999999999885
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. +++..++.+|+||++|+.|||. ++++|||||.+|||+|.+++++|+|||++.. .+.+|++-|.+||
T Consensus 149 ~----LsErEaRhfFRQIvSAVhYCHk--nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPE 222 (668)
T KOG0611|consen 149 S----LSEREARHFFRQIVSAVHYCHK--NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPE 222 (668)
T ss_pred c----ccHHHHHHHHHHHHHHHHHHhh--ccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCcc
Confidence 4 9999999999999999999999 8899999999999999999999999999875 7899999999999
Q ss_pred c--CCCCch-----------hhhhhhCCCCCCcch
Q psy238 155 Y--GRPISG-----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~--~~~~~~-----------~~ei~tg~~p~~~~~ 176 (218)
+ |.++.. +|-++.|.-||++..
T Consensus 223 IvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D 257 (668)
T KOG0611|consen 223 IVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD 257 (668)
T ss_pred ccCCCCCCCCccchhhHHHHHHHHhhcccccCCch
Confidence 7 555544 799999999999764
No 9
>KOG1187|consensus
Probab=100.00 E-value=5.4e-33 Score=231.59 Aligned_cols=164 Identities=23% Similarity=0.383 Sum_probs=138.2
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||||.+..... .. ...|.+|+.+|.+++|||+|+|+|||.+.+. ..++|+||+++|||.++|......
T Consensus 97 ~~~~~vAVK~~~~~~~---~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~---~~~LVYEym~nGsL~d~L~~~~~~ 169 (361)
T KOG1187|consen 97 SDGTVVAVKRLSSNSG---QG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGE---HRLLVYEYMPNGSLEDHLHGKKGE 169 (361)
T ss_pred CCCCEEEEEEecCCCC---cc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCc---eEEEEEEccCCCCHHHHhCCCCCC
Confidence 4568999998874321 11 4459999999999999999999999987542 489999999999999999986532
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCccccccC---------CCccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIEN---------KKYLSATRQ 153 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~~---------~~t~~y~aP 153 (218)
+++|..+..|+.+++.||.|||+ +...||||||||+|||+|+++.+||+|||++..... .||++|+||
T Consensus 170 --~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~P 247 (361)
T KOG1187|consen 170 --PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAP 247 (361)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCCh
Confidence 79999999999999999999999 645799999999999999999999999999876555 899999999
Q ss_pred ccCCC--Cch----------hhhhhhCCCCCCcch
Q psy238 154 TYGRP--ISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~~--~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+... .+. +.|++||+.+++...
T Consensus 248 Ey~~~g~lt~KsDVySFGVvllElitgr~~~d~~~ 282 (361)
T KOG1187|consen 248 EYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR 282 (361)
T ss_pred hhhccCCcCcccccccchHHHHHHHhCCcccCCCC
Confidence 98431 221 679999999998654
No 10
>KOG0591|consensus
Probab=100.00 E-value=2.6e-34 Score=223.70 Aligned_cols=174 Identities=20% Similarity=0.208 Sum_probs=148.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
++.+|..||+|.++..... ....+.+..|+.+|++++|||||+++++....++ ..+++|||+|.+|+|...+....
T Consensus 40 ~~~~g~l~a~K~i~f~~md--~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~--evlnivmE~c~~GDLsqmIk~~K 115 (375)
T KOG0591|consen 40 CLLDGKLVALKKIQFGMMD--AKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN--EVLNIVMELCDAGDLSQMIKHFK 115 (375)
T ss_pred eccCcchhhhhhcchhhcc--HHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc--hhhHHHHHhhcccCHHHHHHHHH
Confidence 5789999999999965433 5677889999999999999999999985433222 24899999999999999999988
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhc--CCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHS--CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
.....+|+.++|.++.|++.||..||+ ...-|+||||||.||+++.+|.+||+|||+++. .+.+||+.||
T Consensus 116 ~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYM 195 (375)
T KOG0591|consen 116 KQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYM 195 (375)
T ss_pred hccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCccc
Confidence 888889999999999999999999998 212389999999999999999999999999876 6689999999
Q ss_pred cccc--CCCCch----------hhhhhhCCCCCCcchhhh
Q psy238 152 RQTY--GRPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 152 aPE~--~~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
+||+ ..+++. +|||.+-..||.+.+--+
T Consensus 196 SPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~ 235 (375)
T KOG0591|consen 196 SPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS 235 (375)
T ss_pred CHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH
Confidence 9997 445444 689999999998875433
No 11
>KOG0600|consensus
Probab=100.00 E-value=4.4e-33 Score=231.04 Aligned_cols=172 Identities=22% Similarity=0.307 Sum_probs=146.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|+.||..||+|.+.+.+.. ........+||.||++|+||||++|.+...+.. .+.+|||||||+ .+|.-++....
T Consensus 138 ~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlVFeYMd-hDL~GLl~~p~ 212 (560)
T KOG0600|consen 138 DLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLVFEYMD-HDLSGLLSSPG 212 (560)
T ss_pred ecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEEEeccc-chhhhhhcCCC
Confidence 7899999999999976422 445567889999999999999999999988752 357999999997 69999987643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
-.|++.++..|+.||+.||.|||+ +||+|||||.+|||||.+|.++|+|||+++. +..+.|.||.|
T Consensus 213 ---vkft~~qIKc~mkQLl~Gl~~cH~--~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRp 287 (560)
T KOG0600|consen 213 ---VKFTEPQIKCYMKQLLEGLEYCHS--RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRP 287 (560)
T ss_pred ---cccChHHHHHHHHHHHHHHHHHhh--cCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccC
Confidence 349999999999999999999999 7799999999999999999999999999984 45677999999
Q ss_pred ccc--CC-CCch----------hhhhhhCCCCCCcchhhhhHHH
Q psy238 153 QTY--GR-PISG----------QYEIVTKTNNVTEKKKEKEEEE 183 (218)
Q Consensus 153 PE~--~~-~~~~----------~~ei~tg~~p~~~~~~ee~~~~ 183 (218)
||+ |. .+.. +.||++|+..|.+..+-++.+.
T Consensus 288 PELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~k 331 (560)
T KOG0600|consen 288 PELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHK 331 (560)
T ss_pred hHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHH
Confidence 996 22 2222 7999999999999888766543
No 12
>KOG0592|consensus
Probab=100.00 E-value=1.3e-33 Score=235.87 Aligned_cols=165 Identities=22% Similarity=0.302 Sum_probs=139.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..++.+||||++..... ........+..|-.+|..| .||+|++|+..|.|.. .+|+|++|+++|+|.++|...
T Consensus 94 ~~~t~keYAiKVl~K~~I-ike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~----sLYFvLe~A~nGdll~~i~K~ 168 (604)
T KOG0592|consen 94 EKATGKEYAIKVLDKRYI-IKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE----SLYFVLEYAPNGDLLDLIKKY 168 (604)
T ss_pred ecCCCceeeHhhhhHHHH-HhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc----ceEEEEEecCCCcHHHHHHHh
Confidence 577999999999984321 1133345667888899999 8999999999998865 599999999999999999988
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------------------
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------------- 141 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------------- 141 (218)
+. |++..++.|+.||+.||+|||+ +|||||||||+|||+|.|++++|+|||.+..
T Consensus 169 Gs----fde~caR~YAAeIldAleylH~--~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s 242 (604)
T KOG0592|consen 169 GS----FDETCARFYAAEILDALEYLHS--NGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASS 242 (604)
T ss_pred Cc----chHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccC
Confidence 54 9999999999999999999999 6699999999999999999999999997654
Q ss_pred --ccCCCcccccccccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 142 --IENKKYLSATRQTYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 142 --~~~~~t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
.+.+||..|.+||+.. ..+. +|.|+.|..||.+..+
T Consensus 243 ~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 243 RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred cccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 3478999999999733 1111 7999999999987654
No 13
>KOG0593|consensus
Probab=100.00 E-value=2.1e-33 Score=220.50 Aligned_cols=168 Identities=19% Similarity=0.268 Sum_probs=143.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..||+.||||.+.-+ .+.+.....+++||.+|+++.|||+|.|+.+|.... .+++|||||+ .++.+-+..++
T Consensus 23 nk~TgqIVAIKkF~Es--edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr----klhLVFE~~d-hTvL~eLe~~p 95 (396)
T KOG0593|consen 23 NKDTGQIVAIKKFVES--EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR----KLHLVFEYCD-HTVLHELERYP 95 (396)
T ss_pred cCCcccEEEEEeeccC--CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc----eeEEEeeecc-hHHHHHHHhcc
Confidence 6789999999988744 555788889999999999999999999999997754 6999999997 57777777765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~aP 153 (218)
. .++...+..+++|++.|+.|||+ +++|||||||+||||+.+|.++|||||+++.. ..+.|.||.||
T Consensus 96 ~---G~~~~~vk~~l~Q~l~ai~~cHk--~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaP 170 (396)
T KOG0593|consen 96 N---GVPSELVKKYLYQLLKAIHFCHK--NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAP 170 (396)
T ss_pred C---CCCHHHHHHHHHHHHHHhhhhhh--cCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccCh
Confidence 3 49999999999999999999999 88999999999999999999999999999873 34668999999
Q ss_pred cc--C-----CCCch------hhhhhhCCCCCCcchhhhhH
Q psy238 154 TY--G-----RPISG------QYEIVTKTNNVTEKKKEKEE 181 (218)
Q Consensus 154 E~--~-----~~~~~------~~ei~tg~~p~~~~~~ee~~ 181 (218)
|+ | .+++. ..||++|.+-|.+.++-.+.
T Consensus 171 ELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQL 211 (396)
T KOG0593|consen 171 ELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQL 211 (396)
T ss_pred hhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHH
Confidence 96 3 22222 68999999999887765443
No 14
>KOG0583|consensus
Probab=100.00 E-value=1.3e-32 Score=229.81 Aligned_cols=163 Identities=20% Similarity=0.298 Sum_probs=139.1
Q ss_pred CCCCCcEEEEEEeecccccccH-HHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFK-AQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~-~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||+|++......... .....+.+|+.+++.++ ||||++++.++.... .+|+||||+.||+|.+++..
T Consensus 38 ~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~----~~~ivmEy~~gGdL~~~i~~ 113 (370)
T KOG0583|consen 38 HRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT----KIYIVMEYCSGGDLFDYIVN 113 (370)
T ss_pred eccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC----eEEEEEEecCCccHHHHHHH
Confidence 4578899999977753211112 34556778999999998 999999999998755 49999999999999999998
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc--------ccCCCcccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
. +++.+..+..+|+|+++|+.|||+ +||+||||||+|||++.+ ++++|+|||++.. .+.+||+.|
T Consensus 114 ~----g~l~E~~ar~~F~Qlisav~y~H~--~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y 187 (370)
T KOG0583|consen 114 K----GRLKEDEARKYFRQLISAVAYCHS--RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAY 187 (370)
T ss_pred c----CCCChHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCccc
Confidence 4 359999999999999999999999 779999999999999999 9999999999874 568999999
Q ss_pred cccccCC--C-Cch-----------hhhhhhCCCCCCc
Q psy238 151 TRQTYGR--P-ISG-----------QYEIVTKTNNVTE 174 (218)
Q Consensus 151 ~aPE~~~--~-~~~-----------~~ei~tg~~p~~~ 174 (218)
+|||+.. . ++. +|-|++|..||+.
T Consensus 188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d 225 (370)
T KOG0583|consen 188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD 225 (370)
T ss_pred CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 9999833 3 443 7999999999987
No 15
>KOG0588|consensus
Probab=100.00 E-value=7.6e-33 Score=235.86 Aligned_cols=167 Identities=20% Similarity=0.320 Sum_probs=146.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..||+.+|||++.... .........+.+||-||+.+.||||+++|++++... ++|+|+||++||-|.+++...+
T Consensus 33 h~~TGqlaaiKii~k~~-~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~----~lylvlEyv~gGELFdylv~kG 107 (786)
T KOG0588|consen 33 HAETGQLAAIKIIPKRS-ELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ----HLYLVLEYVPGGELFDYLVRKG 107 (786)
T ss_pred cccccceeEEEeecccc-ccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc----eEEEEEEecCCchhHHHHHhhC
Confidence 46799999999998542 333556778999999999999999999999997754 6999999999999999998874
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
++++..+..++.||+.|+.|||. .+|+||||||+|+|+|..+++||+|||++.. .+.||++.|.|||
T Consensus 108 ----~l~e~eaa~ff~QIi~gv~yCH~--~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PE 181 (786)
T KOG0588|consen 108 ----PLPEREAAHFFRQILDGVSYCHA--FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPE 181 (786)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHhh--hcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCch
Confidence 49999999999999999999999 6699999999999999999999999999986 6789999999999
Q ss_pred c--CCCCch-----------hhhhhhCCCCCCcchhhh
Q psy238 155 Y--GRPISG-----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 155 ~--~~~~~~-----------~~ei~tg~~p~~~~~~ee 179 (218)
+ |.++.. +|-++||+.||++..-..
T Consensus 182 IV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~ 219 (786)
T KOG0588|consen 182 IVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV 219 (786)
T ss_pred hhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH
Confidence 7 555544 799999999999655443
No 16
>KOG0605|consensus
Probab=99.97 E-value=2.5e-31 Score=221.98 Aligned_cols=167 Identities=17% Similarity=0.253 Sum_probs=143.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..||..+|+|++..++... ......+..|-.+|....+|.||+|+..|.+.. ++||||||++||++..+|....
T Consensus 163 k~Tg~iyAmK~LkKS~M~~-~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~----~LYLiMEylPGGD~mTLL~~~~- 236 (550)
T KOG0605|consen 163 KDTGEIYAMKILKKSEMLK-KNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE----YLYLIMEYLPGGDMMTLLMRKD- 236 (550)
T ss_pred ccCCcEEeeecccHHHHHh-hhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC----eeEEEEEecCCccHHHHHHhcC-
Confidence 4689999999999765544 556778899999999999999999999998866 6999999999999999999874
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------------------
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------------------- 141 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------------------- 141 (218)
.|++..++.|+.+++.||..||. .|+|||||||+|+|||..|+++|+|||+|..
T Consensus 237 ---~L~e~~arfYiaE~vlAI~~iH~--~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~ 311 (550)
T KOG0605|consen 237 ---TLTEDWARFYIAETVLAIESIHQ--LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLS 311 (550)
T ss_pred ---cCchHHHHHHHHHHHHHHHHHHH--cCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhc
Confidence 49999999999999999999999 7799999999999999999999999998732
Q ss_pred ----------------------------------ccCCCccccccccc--CCCCc------h----hhhhhhCCCCCCcc
Q psy238 142 ----------------------------------IENKKYLSATRQTY--GRPIS------G----QYEIVTKTNNVTEK 175 (218)
Q Consensus 142 ----------------------------------~~~~~t~~y~aPE~--~~~~~------~----~~ei~tg~~p~~~~ 175 (218)
...+||+.|+|||+ +..+. . +||++.|-+||.+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~ 391 (550)
T KOG0605|consen 312 EAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSE 391 (550)
T ss_pred cCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23589999999997 22211 1 79999999999876
Q ss_pred hhhhh
Q psy238 176 KKEKE 180 (218)
Q Consensus 176 ~~ee~ 180 (218)
...+.
T Consensus 392 tp~~T 396 (550)
T KOG0605|consen 392 TPQET 396 (550)
T ss_pred CHHHH
Confidence 55443
No 17
>KOG0582|consensus
Probab=99.97 E-value=2.6e-31 Score=217.77 Aligned_cols=165 Identities=16% Similarity=0.214 Sum_probs=141.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
...++..||||++... ........+++|++.|+.++||||+.++..|.... .+|+||.||.+||+.+++...-
T Consensus 47 c~p~~e~VAIK~inLE---kc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~----~LWvVmpfMa~GS~ldIik~~~ 119 (516)
T KOG0582|consen 47 CIPTNEVVAIKIINLE---KCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS----ELWVVMPFMAGGSLLDIIKTYY 119 (516)
T ss_pred ecccCCEEEEEEeehh---hhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc----eeEEeehhhcCCcHHHHHHHHc
Confidence 3567899999999974 33445789999999999999999999999998755 5999999999999999999876
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKYLS 149 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t~~ 149 (218)
. ..+++..+..++++++.||.|||. +|-||||||+.||||+.+|.++|+|||.+.. .+..||+.
T Consensus 120 ~--~Gl~E~~Ia~iLre~LkaL~YLH~--~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~ 195 (516)
T KOG0582|consen 120 P--DGLEEASIATILREVLKALDYLHQ--NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPC 195 (516)
T ss_pred c--ccccHHHHHHHHHHHHHHHHHHHh--cCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCccc
Confidence 5 349999999999999999999999 8899999999999999999999999997643 55689999
Q ss_pred ccccccC----CCCch----------hhhhhhCCCCCCcchh
Q psy238 150 ATRQTYG----RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 150 y~aPE~~----~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|||||+. ..++. +.|+.+|..||.....
T Consensus 196 wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP 237 (516)
T KOG0582|consen 196 WMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP 237 (516)
T ss_pred ccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh
Confidence 9999982 13332 6788899999976553
No 18
>KOG0198|consensus
Probab=99.97 E-value=2.8e-31 Score=215.02 Aligned_cols=163 Identities=25% Similarity=0.348 Sum_probs=136.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|...|||.+... +... .+.+.+|+.+|..++|||||+++|....... ..++++|||+++|||.+++....
T Consensus 38 ~~~~g~~~AvK~v~~~---~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~~~i~mEy~~~GsL~~~~~~~g 111 (313)
T KOG0198|consen 38 NKKTGELMAVKSVELE---DSPT-SESLEREIRILSRLNHPNIVQYYGSSSSREN--DEYNIFMEYAPGGSLSDLIKRYG 111 (313)
T ss_pred ecCCCcceeeeeeecc---cchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccC--eeeEeeeeccCCCcHHHHHHHcC
Confidence 3456899999999864 1122 6778999999999999999999997444321 35899999999999999999875
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc-----------ccCCCccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT-----------IENKKYLS 149 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~-----------~~~~~t~~ 149 (218)
+ .++++.++.+++|++.||.|||+ +||+||||||+|||++. ++.++|+|||.+.. ....||+.
T Consensus 112 ~---~l~E~~v~~ytr~iL~GL~ylHs--~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~ 186 (313)
T KOG0198|consen 112 G---KLPEPLVRRYTRQILEGLAYLHS--KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPN 186 (313)
T ss_pred C---CCCHHHHHHHHHHHHHHHHHHHh--CCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCcc
Confidence 2 59999999999999999999999 88999999999999999 79999999997763 35789999
Q ss_pred ccccccCC-C--C----------chhhhhhhCCCCCCcc
Q psy238 150 ATRQTYGR-P--I----------SGQYEIVTKTNNVTEK 175 (218)
Q Consensus 150 y~aPE~~~-~--~----------~~~~ei~tg~~p~~~~ 175 (218)
|||||+.. . . ....||+||..||.+.
T Consensus 187 ~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~ 225 (313)
T KOG0198|consen 187 YMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF 225 (313)
T ss_pred ccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh
Confidence 99999843 1 1 1158999999999874
No 19
>KOG0659|consensus
Probab=99.97 E-value=3.9e-31 Score=204.28 Aligned_cols=167 Identities=19% Similarity=0.273 Sum_probs=140.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|+.||+.||||.+...+.. ......+++||..|+.++||||+.|+++|...+ .+.+|+||++ .+|..+++...
T Consensus 23 d~~t~~~VAIKKIkl~~~k--dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~----~l~lVfEfm~-tdLe~vIkd~~ 95 (318)
T KOG0659|consen 23 DTETGKRVAIKKIKLGNAK--DGINRTALREIKLLQELKHPNIIELIDVFPHKS----NLSLVFEFMP-TDLEVVIKDKN 95 (318)
T ss_pred ecCCCcEEEEEEeeccccc--cCccHHHHHHHHHHHHccCcchhhhhhhccCCC----ceEEEEEecc-ccHHHHhcccc
Confidence 7899999999999986433 345567899999999999999999999997755 4899999996 79999998764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..++...+..|+.+++.||+|||+ +.|+||||||.|+|++++|.+||+|||+++. ...+.|.||.||
T Consensus 96 ---i~l~pa~iK~y~~m~LkGl~y~H~--~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAP 170 (318)
T KOG0659|consen 96 ---IILSPADIKSYMLMTLKGLAYCHS--KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAP 170 (318)
T ss_pred ---cccCHHHHHHHHHHHHHHHHHHHh--hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccCh
Confidence 468999999999999999999999 7799999999999999999999999999986 234679999999
Q ss_pred cc--CC-----CCch------hhhhhhCCCCCCcchhhhh
Q psy238 154 TY--GR-----PISG------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 154 E~--~~-----~~~~------~~ei~tg~~p~~~~~~ee~ 180 (218)
|+ |+ +++. ..|++-+..-|.+.++=++
T Consensus 171 ELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ 210 (318)
T KOG0659|consen 171 ELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ 210 (318)
T ss_pred HHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH
Confidence 95 22 2211 6788888777777665443
No 20
>KOG0599|consensus
Probab=99.97 E-value=3.4e-31 Score=205.88 Aligned_cols=165 Identities=19% Similarity=0.273 Sum_probs=140.0
Q ss_pred CCCCCCcEEEEEEeecccccc----cHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHH
Q psy238 1 MDTEEGVEVVWNEVQFSERKN----FKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~----~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~ 75 (218)
++..+|.++|+|++....... .....+....|+.||+++ .||+|+.+.++|..+. .+++|++.|+.|.|.+
T Consensus 37 i~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s----F~FlVFdl~prGELFD 112 (411)
T KOG0599|consen 37 IHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA----FVFLVFDLMPRGELFD 112 (411)
T ss_pred hhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc----hhhhhhhhcccchHHH
Confidence 356899999999998743322 233456677899999998 7999999999997754 5899999999999999
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcc
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYL 148 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~ 148 (218)
+|..... +++...+.+++|++.|+.|||. +.||||||||+|||++++.+++|+|||++.. ...+||+
T Consensus 113 yLts~Vt----lSEK~tR~iMrqlfegVeylHa--~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTP 186 (411)
T KOG0599|consen 113 YLTSKVT----LSEKETRRIMRQLFEGVEYLHA--RNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTP 186 (411)
T ss_pred Hhhhhee----ecHHHHHHHHHHHHHHHHHHHH--hhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCC
Confidence 9988765 9999999999999999999999 6699999999999999999999999999987 5679999
Q ss_pred cccccccCC-------C-Cch----------hhhhhhCCCCCCcc
Q psy238 149 SATRQTYGR-------P-ISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 149 ~y~aPE~~~-------~-~~~----------~~ei~tg~~p~~~~ 175 (218)
+|+|||... + ++. +|.++.|-.||+..
T Consensus 187 gYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR 231 (411)
T KOG0599|consen 187 GYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR 231 (411)
T ss_pred cccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH
Confidence 999999511 1 111 78899999999844
No 21
>KOG0597|consensus
Probab=99.97 E-value=3.4e-31 Score=222.61 Aligned_cols=161 Identities=21% Similarity=0.267 Sum_probs=141.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
+.|++.||+|.+.... ........+.+|++|+..+.|||||.++++|+.+. ++|+|+||+.| +|..+|....
T Consensus 24 K~t~~~vAik~i~K~g--r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~----~~~vVte~a~g-~L~~il~~d~- 95 (808)
T KOG0597|consen 24 KYTIQVVAIKFIDKSG--RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA----HLWVVTEYAVG-DLFTILEQDG- 95 (808)
T ss_pred ccceeEEEEEEehhcC--CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc----eEEEEehhhhh-hHHHHHHhcc-
Confidence 4578899999998543 33556778999999999999999999999997754 69999999975 9999999764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
.+|++.+..++.+++.||.|||+ .+|+|||++|.|||++..+.+|+||||+++. ....||+-|||||
T Consensus 96 ---~lpEe~v~~~a~~LVsaL~yLhs--~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPE 170 (808)
T KOG0597|consen 96 ---KLPEEQVRAIAYDLVSALYYLHS--NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPE 170 (808)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHh--cCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHH
Confidence 49999999999999999999999 8899999999999999999999999999986 5679999999999
Q ss_pred c--CCCCch----------hhhhhhCCCCCCcch
Q psy238 155 Y--GRPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~--~~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+ +.+++. +||+++|++||....
T Consensus 171 lv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s 204 (808)
T KOG0597|consen 171 LVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS 204 (808)
T ss_pred HHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH
Confidence 7 445444 799999999997544
No 22
>KOG0594|consensus
Probab=99.97 E-value=1.4e-30 Score=208.70 Aligned_cols=173 Identities=19% Similarity=0.301 Sum_probs=143.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCc-ccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPN-IVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~-iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
+..+|..||+|.+...... ........+|+.+|..++|+| |+.|++++..... ..+.+++||||++ .+|..++.
T Consensus 32 ~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd 108 (323)
T KOG0594|consen 32 SKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMD 108 (323)
T ss_pred EecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHH
Confidence 5678999999999875322 335567799999999999999 9999999877542 2346899999995 79999999
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
........++...+..+++||+.||+|||+ ++|+||||||+||||+++|.+||+|||+++. .+..+|.+|
T Consensus 109 ~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~--~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWY 186 (323)
T KOG0594|consen 109 SLPKKPQGLPPRLIKSFMRQLLRGLAFLHS--HGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWY 186 (323)
T ss_pred hccccccCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeec
Confidence 876322347778999999999999999999 8899999999999999999999999999976 567889999
Q ss_pred ccccc--CC-CCch----------hhhhhhCCCCCCcchhhh
Q psy238 151 TRQTY--GR-PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 151 ~aPE~--~~-~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
.|||+ |+ .+++ .+||++++.-|.+..+..
T Consensus 187 RaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ 228 (323)
T KOG0594|consen 187 RAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID 228 (323)
T ss_pred cCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH
Confidence 99997 33 2222 689999999998887733
No 23
>KOG0694|consensus
Probab=99.97 E-value=3.2e-31 Score=226.75 Aligned_cols=166 Identities=14% Similarity=0.194 Sum_probs=139.6
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+++.+|||+++..... .....+....|..|+... +||++++|+.+|.... ++|+||||+.||++..+.+.
T Consensus 390 k~~~e~yAIK~LKK~~Il-~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~----~l~fvmey~~Ggdm~~~~~~-- 462 (694)
T KOG0694|consen 390 KGTNEYYAIKVLKKGDIL-QRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE----HLFFVMEYVAGGDLMHHIHT-- 462 (694)
T ss_pred cCCCcEEEEEEeecccee-ccccHHHHHHHHHHHHHhccCCeEeecccccccCC----eEEEEEEecCCCcEEEEEec--
Confidence 357889999999964432 245567788888888777 5999999999997754 79999999999994444432
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..|++..++.|+..|+.||.|||+ ++||+||||.+|||+|.+|+++|+|||++.. .+.+||+.||||
T Consensus 463 ---~~F~e~rarfyaAev~l~L~fLH~--~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aP 537 (694)
T KOG0694|consen 463 ---DVFSEPRARFYAAEVVLGLQFLHE--NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAP 537 (694)
T ss_pred ---ccccHHHHHHHHHHHHHHHHHHHh--cCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcCh
Confidence 349999999999999999999999 8899999999999999999999999999865 789999999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchhhhh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~ee~ 180 (218)
|+.. .++. +|||+.|..||.+..++|.
T Consensus 538 Eil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~ 576 (694)
T KOG0694|consen 538 EVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV 576 (694)
T ss_pred hhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 9733 3332 7999999999998877764
No 24
>KOG0663|consensus
Probab=99.97 E-value=6.5e-31 Score=208.87 Aligned_cols=169 Identities=19% Similarity=0.242 Sum_probs=142.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|+.|++.||+|.++... ......-..++||.+|.+++|||||.+-.+...+.. ..+||||+||+ .+|.+++....
T Consensus 97 dk~t~eIVALKr~kmek--ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~--d~iy~VMe~~E-hDLksl~d~m~ 171 (419)
T KOG0663|consen 97 DKKTDEIVALKRLKMEK--EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM--DKIYIVMEYVE-HDLKSLMETMK 171 (419)
T ss_pred cCCcceeEEeeeccccc--ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc--ceeeeeHHHHH-hhHHHHHHhcc
Confidence 78899999999999753 223344567899999999999999999998876554 35999999996 69999999865
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.+|....+..+..|++.||.|||+ +.|+||||||+|+|+++.|.++|+|||+++. +..+.|.||.||
T Consensus 172 ---q~F~~~evK~L~~QlL~glk~lH~--~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaP 246 (419)
T KOG0663|consen 172 ---QPFLPGEVKTLMLQLLRGLKHLHD--NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAP 246 (419)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHhh--ceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCH
Confidence 569999999999999999999999 7799999999999999999999999999986 556789999999
Q ss_pred cc--CC-CCch----------hhhhhhCCCCCCcchhhhh
Q psy238 154 TY--GR-PISG----------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 154 E~--~~-~~~~----------~~ei~tg~~p~~~~~~ee~ 180 (218)
|+ |. .++. +.|+++++.-|.+..+-.+
T Consensus 247 ELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ 286 (419)
T KOG0663|consen 247 ELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ 286 (419)
T ss_pred HHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH
Confidence 97 32 3333 5778888888888765443
No 25
>KOG0610|consensus
Probab=99.97 E-value=3.4e-30 Score=209.51 Aligned_cols=170 Identities=16% Similarity=0.206 Sum_probs=143.4
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..+|+|++....... .....+++.|.+||+.+.||+++.||..|.... ..|+|||||+||+|..+++...+
T Consensus 100 ~t~~~fAmKVmdK~~l~~-rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~----~~cl~meyCpGGdL~~LrqkQp~- 173 (459)
T KOG0610|consen 100 GTNCLFAMKVMDKESLAS-RKKLKRAQTEREILSLLDHPFLPTLYASFETDK----YSCLVMEYCPGGDLHSLRQKQPG- 173 (459)
T ss_pred CCCceEEEEEecHHHHhh-hhHHHHHHHHHHHHHhcCCCccchhhheeeccc----eeEEEEecCCCccHHHHHhhCCC-
Confidence 356889999998543332 556678888999999999999999999997754 68999999999999999998865
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------------------
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------------------- 141 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------------------- 141 (218)
..+++..++.|+.+|+.||+|||- .|||+|||||+||||.++|++.|+||.++..
T Consensus 174 -~~fse~~aRFYaAEvl~ALEYLHm--lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~ 250 (459)
T KOG0610|consen 174 -KRFSESAARFYAAEVLLALEYLHM--LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSC 250 (459)
T ss_pred -CccchhhHHHHHHHHHHHHHHHHh--hceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccc
Confidence 679999999999999999999999 6699999999999999999999999885422
Q ss_pred ------------------------------------------ccCCCccccccccc--CC------CCch----hhhhhh
Q psy238 142 ------------------------------------------IENKKYLSATRQTY--GR------PISG----QYEIVT 167 (218)
Q Consensus 142 ------------------------------------------~~~~~t~~y~aPE~--~~------~~~~----~~ei~t 167 (218)
...+||..|+|||+ |. .|+. +|||+.
T Consensus 251 ~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLy 330 (459)
T KOG0610|consen 251 RSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLY 330 (459)
T ss_pred ccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHh
Confidence 22468899999997 22 2222 799999
Q ss_pred CCCCCCcchhhhhHH
Q psy238 168 KTNNVTEKKKEKEEE 182 (218)
Q Consensus 168 g~~p~~~~~~ee~~~ 182 (218)
|..||.+...++.--
T Consensus 331 G~TPFKG~~~~~Tl~ 345 (459)
T KOG0610|consen 331 GTTPFKGSNNKETLR 345 (459)
T ss_pred CCCCcCCCCchhhHH
Confidence 999999988877643
No 26
>KOG0661|consensus
Probab=99.97 E-value=2.2e-31 Score=219.61 Aligned_cols=165 Identities=22% Similarity=0.241 Sum_probs=139.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHH-HHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEE-KIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~-~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
..++|..||||.++. .+-...+ .-++|+..|.+++ |||||+|.+++.+.+. .+|+|||||+ .+|.+++..
T Consensus 31 ~~~~~~~VAIK~MK~----Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~---~L~fVfE~Md-~NLYqLmK~ 102 (538)
T KOG0661|consen 31 SKETGELVAIKKMKK----KFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR---ILYFVFEFMD-CNLYQLMKD 102 (538)
T ss_pred ecCCCceeeHHHHHh----hhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc---eEeeeHHhhh-hhHHHHHhh
Confidence 367899999999983 2222333 3378999999998 9999999999988652 6999999996 799999998
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
++ ..|++..++.|++||++||+|+|. +|+.|||+||+|||+.....+||+|||+++. +..+.|.||.|
T Consensus 103 R~---r~fse~~irnim~QilqGL~hiHk--~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRA 177 (538)
T KOG0661|consen 103 RN---RLFSESDIRNIMYQILQGLAHIHK--HGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRA 177 (538)
T ss_pred cC---CcCCHHHHHHHHHHHHHHHHHHHh--cCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccc
Confidence 73 679999999999999999999999 8899999999999999999999999999986 55688999999
Q ss_pred cccCC---CCch----------hhhhhhCCCCCCcchhhh
Q psy238 153 QTYGR---PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~~---~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||+.. -++. ++||++-+.-|.+..+-.
T Consensus 178 PEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D 217 (538)
T KOG0661|consen 178 PEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID 217 (538)
T ss_pred hHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH
Confidence 99722 1111 799999999998776543
No 27
>KOG0578|consensus
Probab=99.97 E-value=7e-31 Score=220.55 Aligned_cols=157 Identities=22% Similarity=0.315 Sum_probs=137.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||||.+... .....+-+++|+.+|+..+|+|||.+++.|...+ .+|+||||++||+|.+++....
T Consensus 294 ~~~~~~~VaiK~m~l~----~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d----eLWVVMEym~ggsLTDvVt~~~ 365 (550)
T KOG0578|consen 294 KISTKQEVAIKRMDLR----KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD----ELWVVMEYMEGGSLTDVVTKTR 365 (550)
T ss_pred eccCCceEEEEEEEec----cCCchhhhHHHHHHHHhccchHHHHHHHHhcccc----eeEEEEeecCCCchhhhhhccc
Confidence 3467889999999853 2445677899999999999999999999887764 4999999999999999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
+++.++..++++++.||.|||. +||+|||||.+|||+..+|.+||+|||+|.. .+.+||+.||||
T Consensus 366 -----~~E~qIA~Icre~l~aL~fLH~--~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAP 438 (550)
T KOG0578|consen 366 -----MTEGQIAAICREILQGLKFLHA--RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAP 438 (550)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHh--cceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccch
Confidence 8999999999999999999999 8899999999999999999999999999876 678999999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCC
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVT 173 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~ 173 (218)
|+.. .+.+ +.||+-|..||-
T Consensus 439 EVvtrk~YG~KVDIWSLGIMaIEMveGEPPYl 470 (550)
T KOG0578|consen 439 EVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYL 470 (550)
T ss_pred hhhhhcccCccccchhhhhHHHHHhcCCCCcc
Confidence 9722 1111 799999999995
No 28
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=7.7e-30 Score=213.83 Aligned_cols=167 Identities=14% Similarity=0.184 Sum_probs=137.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+..|+.++..++||+|+++++++.+.. .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~- 95 (363)
T cd05628 22 KKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL----NLYLIMEFLPGGDMMTLLMKK- 95 (363)
T ss_pred ECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----eEEEEEcCCCCCcHHHHHHhc-
Confidence 456899999999974321 11334467788999999999999999999987654 589999999999999999864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 96 ---~~l~~~~~~~~~~qi~~aL~~lH~--~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~ 170 (363)
T cd05628 96 ---DTLTEEETQFYIAETVLAIDSIHQ--LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD 170 (363)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccc
Confidence 349999999999999999999999 7799999999999999999999999998753
Q ss_pred -----------------------ccCCCccccccccc--CCCCch----------hhhhhhCCCCCCcchhhh
Q psy238 142 -----------------------IENKKYLSATRQTY--GRPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 142 -----------------------~~~~~t~~y~aPE~--~~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
....||+.|+|||+ +..++. +|+|++|..||.+....+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~ 243 (363)
T cd05628 171 FTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE 243 (363)
T ss_pred ccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 12468999999997 222222 799999999998665443
No 29
>KOG0585|consensus
Probab=99.97 E-value=1.8e-30 Score=214.28 Aligned_cols=168 Identities=19% Similarity=0.246 Sum_probs=134.7
Q ss_pred CCCCCcEEEEEEeeccccc------ccH----HHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCC
Q psy238 2 DTEEGVEVVWNEVQFSERK------NFK----AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSG 71 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~------~~~----~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~ 71 (218)
|..+|..||||++...... ... ...+.+.+||.+|++++|||||+|+.+.-++. ...+|||+|||..|
T Consensus 118 ~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~--s~~~YlVley~s~G 195 (576)
T KOG0585|consen 118 DEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPE--SDKLYLVLEYCSKG 195 (576)
T ss_pred ecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcc--cCceEEEEEeccCC
Confidence 6778999999999854321 101 11257899999999999999999999987754 45899999999887
Q ss_pred CHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------
Q psy238 72 SLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------- 141 (218)
Q Consensus 72 sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------- 141 (218)
.+...-... ..++..+++.|++.++.||+|||. +|||||||||+|+|++++|.+||+|||.+..
T Consensus 196 ~v~w~p~d~----~els~~~Ar~ylrDvv~GLEYLH~--QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d 269 (576)
T KOG0585|consen 196 EVKWCPPDK----PELSEQQARKYLRDVVLGLEYLHY--QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSD 269 (576)
T ss_pred ccccCCCCc----ccccHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEEcCCCcEEeeccceeeecccCCccccH
Confidence 775433221 228999999999999999999999 8899999999999999999999999998863
Q ss_pred ---ccCCCcccccccccCCC---Cc-------------hhhhhhhCCCCCCcchh
Q psy238 142 ---IENKKYLSATRQTYGRP---IS-------------GQYEIVTKTNNVTEKKK 177 (218)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~---~~-------------~~~ei~tg~~p~~~~~~ 177 (218)
....||+.|+|||+... .+ ++|=++-|.-||.+...
T Consensus 270 ~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~ 324 (576)
T KOG0585|consen 270 DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE 324 (576)
T ss_pred HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence 44789999999997332 11 16778889999975543
No 30
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=1.4e-29 Score=209.17 Aligned_cols=165 Identities=16% Similarity=0.186 Sum_probs=136.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+.+|+.++..++||||+.+++++.... .+|+||||+++++|.+++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 89 (323)
T cd05571 16 EKATGKYYAMKILKKEVI-IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD----RLCFVMEYANGGELFFHLSRE- 89 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC----EEEEEEeCCCCCcHHHHHHHc-
Confidence 456899999999974321 11334456788999999999999999999887644 699999999999999998764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 90 ---~~~~~~~~~~~~~qi~~~L~~lH~--~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aP 164 (323)
T cd05571 90 ---RVFSEDRARFYGAEIVSALGYLHS--CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 164 (323)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccCh
Confidence 348999999999999999999999 7799999999999999999999999998764 235689999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. +|+|++|..||.....
T Consensus 165 E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 200 (323)
T cd05571 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200 (323)
T ss_pred hhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH
Confidence 9732 2222 7999999999976544
No 31
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=2.4e-29 Score=212.19 Aligned_cols=165 Identities=13% Similarity=0.195 Sum_probs=136.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++.... .........+.+|+.++..+.||||+++++++.+.. .+|+||||+++|+|.+++...
T Consensus 22 ~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~- 95 (382)
T cd05625 22 KVDTKALYAMKTLRKKD-VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD----NLYFVMDYIPGGDMMSLLIRM- 95 (382)
T ss_pred ECCCCCEEEEEEEeHHH-hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC----EEEEEEeCCCCCcHHHHHHhc-
Confidence 45688999999997432 112344567889999999999999999999997644 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 96 ---~~~~e~~~~~~~~qi~~al~~lH~--~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~ 170 (382)
T cd05625 96 ---GIFPEDLARFYIAELTCAVESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDS 170 (382)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccccccc
Confidence 348999999999999999999999 7799999999999999999999999998631
Q ss_pred -----------------------------------ccCCCcccccccccC--CCCch----------hhhhhhCCCCCCc
Q psy238 142 -----------------------------------IENKKYLSATRQTYG--RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 142 -----------------------------------~~~~~t~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~ 174 (218)
....||+.|+|||+. ..++. +|+|++|..||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 171 MDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred ccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 123689999999972 22222 7999999999986
Q ss_pred chh
Q psy238 175 KKK 177 (218)
Q Consensus 175 ~~~ 177 (218)
...
T Consensus 251 ~~~ 253 (382)
T cd05625 251 QTP 253 (382)
T ss_pred CCH
Confidence 654
No 32
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=1.7e-29 Score=209.16 Aligned_cols=165 Identities=20% Similarity=0.255 Sum_probs=137.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|+.||||++...... .......+.+|+.++..++||||+++++++.+.. .+|+||||+++++|.+++...
T Consensus 39 ~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 112 (329)
T PTZ00263 39 HKGTGEYYAIKCLKKREIL-KMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN----RVYFLLEFVVGGELFTHLRKA- 112 (329)
T ss_pred ECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC----EEEEEEcCCCCChHHHHHHHc-
Confidence 3567899999999743211 1234567889999999999999999999987654 699999999999999999865
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|||+.
T Consensus 113 ---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~ 187 (329)
T PTZ00263 113 ---GRFPNDVAKFYHAELVLAFEYLHS--KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVI 187 (329)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHH
Confidence 348999999999999999999999 7799999999999999999999999999875 345789999999962
Q ss_pred --CCCch----------hhhhhhCCCCCCcchh
Q psy238 157 --RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 157 --~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
...+. +|+|++|..||.+...
T Consensus 188 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 220 (329)
T PTZ00263 188 QSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP 220 (329)
T ss_pred cCCCCCCcceeechHHHHHHHHcCCCCCCCCCH
Confidence 22211 7999999999976544
No 33
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=2.4e-29 Score=207.66 Aligned_cols=166 Identities=18% Similarity=0.174 Sum_probs=136.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||||++..............+..|+.+|..++||||++++++|...+ .+|+||||+++++|.+++...
T Consensus 21 ~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~-- 94 (323)
T cd05584 21 ADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG----KLYLILEYLSGGELFMHLERE-- 94 (323)
T ss_pred CCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC----eEEEEEeCCCCchHHHHHHHc--
Confidence 45789999999975322222334456788999999999999999999987643 689999999999999998764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|||
T Consensus 95 --~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 170 (323)
T cd05584 95 --GIFMEDTACFYLSEISLALEHLHQ--QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPE 170 (323)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChh
Confidence 348889999999999999999999 7799999999999999999999999998753 2346899999999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
+.. ..+. +|+|++|..||......
T Consensus 171 ~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~ 206 (323)
T cd05584 171 ILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK 206 (323)
T ss_pred hccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH
Confidence 732 1111 79999999999865543
No 34
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=2.2e-29 Score=206.87 Aligned_cols=165 Identities=14% Similarity=0.153 Sum_probs=136.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ........+..|+.++..++||||+++++++.... .+|+||||+++++|.+++...
T Consensus 14 ~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~- 87 (312)
T cd05585 14 KRDTQRIYALKTIRKAHI-VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE----KLYLVLAFINGGELFHHLQRE- 87 (312)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC----eEEEEEcCCCCCcHHHHHHhc-
Confidence 456789999999974321 12344567788999999999999999999887643 689999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 88 ---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP 162 (312)
T cd05585 88 ---GRFDLSRARFYTAELLCALENLHK--FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAP 162 (312)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCH
Confidence 348999999999999999999999 7799999999999999999999999998764 234689999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. +|++++|..||.....
T Consensus 163 E~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~ 198 (312)
T cd05585 163 ELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV 198 (312)
T ss_pred HHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH
Confidence 9622 2222 7999999999976543
No 35
>KOG0580|consensus
Probab=99.97 E-value=1e-30 Score=199.25 Aligned_cols=167 Identities=19% Similarity=0.249 Sum_probs=142.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++-.||+|++-.+... .......+.+|++|-+.++||||+++|++|.+.. ++|+++||.+.|+|...|.....
T Consensus 44 kks~~IvalKVlfKsqi~-~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~----riyLilEya~~gel~k~L~~~~~ 118 (281)
T KOG0580|consen 44 KKSLFIVALKVLFKSQIL-KTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK----RIYLILEYAPRGELYKDLQEGRM 118 (281)
T ss_pred ccCCcEEEEeeeeHHHHH-HhcchhhhhheeEeecccCCccHHhhhhheeccc----eeEEEEEecCCchHHHHHHhccc
Confidence 457788999999865422 2345678889999999999999999999998865 69999999999999999996543
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCcccccccccC
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTYG 156 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~~ 156 (218)
..+++..+..+..|++.||.|||. .+||||||+|+|+|++.++.++|+|||++-. .+.+||+.|.+||..
T Consensus 119 --~~f~e~~~a~Yi~q~A~Al~y~h~--k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv 194 (281)
T KOG0580|consen 119 --KRFDEQRAATYIKQLANALLYCHL--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMV 194 (281)
T ss_pred --ccccccchhHHHHHHHHHHHHhcc--CCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhc
Confidence 559999999999999999999999 6699999999999999999999999998754 678999999999974
Q ss_pred CCC--ch----------hhhhhhCCCCCCcchhh
Q psy238 157 RPI--SG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 157 ~~~--~~----------~~ei~tg~~p~~~~~~e 178 (218)
.+- +. .||++.|..||......
T Consensus 195 ~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~ 228 (281)
T KOG0580|consen 195 EGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS 228 (281)
T ss_pred CCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH
Confidence 422 22 59999999999877633
No 36
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=3.3e-29 Score=207.37 Aligned_cols=166 Identities=17% Similarity=0.205 Sum_probs=136.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||||++..... ........+.+|+.+++.++||||+++++++...+ .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~lv~Ey~~~g~L~~~l~~~- 89 (328)
T cd05593 16 EKASGKYYAMKILKKEVI-IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD----RLCFVMEYVNGGELFFHLSRE- 89 (328)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC----EEEEEEeCCCCCCHHHHHHhc-
Confidence 456899999999974321 11334567788999999999999999999887644 689999999999999988754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 90 ---~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP 164 (328)
T cd05593 90 ---RVFSEDRTRFYGAEIVSALDYLHS--GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAP 164 (328)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccCh
Confidence 348999999999999999999999 7799999999999999999999999998764 234689999999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+. ..++. +|++++|..||.....+
T Consensus 165 E~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~ 201 (328)
T cd05593 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 201 (328)
T ss_pred hhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH
Confidence 972 22222 79999999999765443
No 37
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=1.6e-29 Score=205.80 Aligned_cols=166 Identities=18% Similarity=0.221 Sum_probs=137.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|+.||||++...... .......+.+|+.++..++||||+++++++.+.. .+|+||||+++++|.+++....
T Consensus 22 ~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~ 96 (291)
T cd05612 22 DRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR----FLYMLMEYVPGGELFSYLRNSG 96 (291)
T ss_pred EcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC----eEEEEEeCCCCCCHHHHHHHcC
Confidence 4567999999999753211 1234567889999999999999999998876643 6899999999999999997653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
.+++..+..++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....|++.|+|||+.
T Consensus 97 ----~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~ 170 (291)
T cd05612 97 ----RFSNSTGLFYASEIVCALEYLHS--KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVI 170 (291)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHH
Confidence 48999999999999999999999 7799999999999999999999999999875 345689999999962
Q ss_pred --CCCch----------hhhhhhCCCCCCcchhh
Q psy238 157 --RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 157 --~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
...+. +|+|++|..||.+....
T Consensus 171 ~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~ 204 (291)
T cd05612 171 QSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF 204 (291)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 22222 79999999999876543
No 38
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=2.9e-29 Score=211.65 Aligned_cols=167 Identities=13% Similarity=0.178 Sum_probs=137.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++...... .......+.+|+.++..++||||+++++++.+.. ++|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~- 95 (381)
T cd05626 22 KVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD----NLYFVMDYIPGGDMMSLLIRM- 95 (381)
T ss_pred ECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC----EEEEEEecCCCCcHHHHHHhc-
Confidence 4568999999999743211 1334567889999999999999999999997644 699999999999999999765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 96 ---~~~~e~~~~~~~~qi~~aL~~LH~--~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~ 170 (381)
T cd05626 96 ---EVFPEVLARFYIAELTLAIESVHK--MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDS 170 (381)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccc
Confidence 348999999999999999999999 7799999999999999999999999998631
Q ss_pred -----------------------------------ccCCCcccccccccC--CCCch----------hhhhhhCCCCCCc
Q psy238 142 -----------------------------------IENKKYLSATRQTYG--RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 142 -----------------------------------~~~~~t~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~ 174 (218)
....||+.|+|||+. ..++. +|+|++|..||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 171 MEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred cCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcC
Confidence 124689999999962 22222 7999999999987
Q ss_pred chhhh
Q psy238 175 KKKEK 179 (218)
Q Consensus 175 ~~~ee 179 (218)
....+
T Consensus 251 ~~~~~ 255 (381)
T cd05626 251 PTPTE 255 (381)
T ss_pred CCHHH
Confidence 65433
No 39
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=2.1e-29 Score=212.10 Aligned_cols=166 Identities=14% Similarity=0.178 Sum_probs=136.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+.+|+.++..++||||++++++|.+.. ++|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~- 95 (377)
T cd05629 22 KKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ----YLYLIMEFLPGGDLMTMLIKY- 95 (377)
T ss_pred ECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----eeEEEEeCCCCCcHHHHHHhc-
Confidence 456899999999874321 11334567888999999999999999999997644 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------------- 142 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------------- 142 (218)
..+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++...
T Consensus 96 ---~~~~~~~~~~~~~ql~~aL~~LH~--~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T cd05629 96 ---DTFSEDVTRFYMAECVLAIEAVHK--LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNK 170 (377)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccc
Confidence 348999999999999999999999 67999999999999999999999999987410
Q ss_pred ------------------------------------cCCCcccccccccC--CCCch----------hhhhhhCCCCCCc
Q psy238 143 ------------------------------------ENKKYLSATRQTYG--RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 143 ------------------------------------~~~~t~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~ 174 (218)
...||+.|+|||+. ..++. +|++++|..||.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 171 NRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred cccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCC
Confidence 24689999999972 22222 7999999999976
Q ss_pred chhh
Q psy238 175 KKKE 178 (218)
Q Consensus 175 ~~~e 178 (218)
....
T Consensus 251 ~~~~ 254 (377)
T cd05629 251 ENSH 254 (377)
T ss_pred CCHH
Confidence 5543
No 40
>KOG0584|consensus
Probab=99.96 E-value=2.2e-30 Score=219.71 Aligned_cols=170 Identities=36% Similarity=0.608 Sum_probs=149.8
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+|..+|.+|||-.++..+....+...+++..|+++|+.|.||||+++|++|.+..+ ..+.+|+|.+..|+|..|+..+
T Consensus 60 ~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in~iTEL~TSGtLr~Y~kk~ 137 (632)
T KOG0584|consen 60 FDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTINFITELFTSGTLREYRKKH 137 (632)
T ss_pred cccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC--ceeeeeeecccCCcHHHHHHHh
Confidence 58899999999999988777778888999999999999999999999999988654 4688999999999999999988
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc------ccCCCccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT------IENKKYLSATRQ 153 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~------~~~~~t~~y~aP 153 (218)
+. +....+..|++||+.||.|||+...+|||||||-+||+|+.+ |.|||+|+|++.. ....||+.||||
T Consensus 138 ~~----vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAP 213 (632)
T KOG0584|consen 138 RR----VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAP 213 (632)
T ss_pred cc----CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccCh
Confidence 54 899999999999999999999955789999999999999765 9999999999876 457999999999
Q ss_pred ccCC-CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR-PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~-~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+-. .+.. +.||+|+..||.+..
T Consensus 214 EmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~ 247 (632)
T KOG0584|consen 214 EMYEENYNELVDVYAFGMCMLEMVTSEYPYSECT 247 (632)
T ss_pred HHHhhhcchhhhhhhhhHHHHHHHhccCChhhhC
Confidence 9632 2222 789999999998654
No 41
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=2.3e-29 Score=211.83 Aligned_cols=166 Identities=13% Similarity=0.185 Sum_probs=136.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+.+|+.+|..+.||||+++++++.+.+ .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~----~~~lv~E~~~~g~L~~~i~~~- 95 (376)
T cd05598 22 KVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD----NLYFVMDYIPGGDMMSLLIRL- 95 (376)
T ss_pred ECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----EEEEEEeCCCCCcHHHHHHhc-
Confidence 456789999999874321 11234566788999999999999999999987644 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++..
T Consensus 96 ---~~~~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 170 (376)
T cd05598 96 ---GIFEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDS 170 (376)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccccc
Confidence 348999999999999999999999 7799999999999999999999999998631
Q ss_pred -------------------------------ccCCCcccccccccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 142 -------------------------------IENKKYLSATRQTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 142 -------------------------------~~~~~t~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
....||+.|+|||+. ..++. +|+|++|..||.+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 250 (376)
T cd05598 171 MEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA 250 (376)
T ss_pred ccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH
Confidence 124689999999962 22221 79999999999876543
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96 E-value=3.8e-29 Score=206.57 Aligned_cols=166 Identities=16% Similarity=0.192 Sum_probs=136.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ........+..|+.++..++||||++++++|.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~----~~~lv~E~~~~~~L~~~l~~~- 89 (323)
T cd05595 16 EKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----RLCFVMEYANGGELFFHLSRE- 89 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC----EEEEEEeCCCCCcHHHHHHHc-
Confidence 456899999999974321 11234456778999999999999999999987644 689999999999999888764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 90 ---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP 164 (323)
T cd05595 90 ---RVFTEERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 164 (323)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCc
Confidence 348999999999999999999999 7799999999999999999999999998754 235689999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+.. .++. +|++++|..||.....+
T Consensus 165 E~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~ 201 (323)
T cd05595 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 201 (323)
T ss_pred ccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 9732 2222 79999999999765543
No 43
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=4.4e-29 Score=206.83 Aligned_cols=167 Identities=14% Similarity=0.138 Sum_probs=138.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++...... .......+..|+.++..++||||+++++++.... .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~----~~~lv~e~~~g~~L~~~l~~~- 95 (333)
T cd05600 22 KKDTGEIVALKRMKKSLLF-KLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE----YLYLAMEYVPGGDFRTLLNNL- 95 (333)
T ss_pred ECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC----EEEEEEeCCCCCCHHHHHHHc-
Confidence 3567899999999743211 1234557788999999999999999999987644 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|||+.
T Consensus 96 ---~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~ 170 (333)
T cd05600 96 ---GVLSEDHARFYMAEMFEAVDALHE--LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVL 170 (333)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHh
Confidence 348999999999999999999999 7799999999999999999999999999875 456789999999972
Q ss_pred --CCCch----------hhhhhhCCCCCCcchhhh
Q psy238 157 --RPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 157 --~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
..++. +|+|++|..||.....++
T Consensus 171 ~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~ 205 (333)
T cd05600 171 RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE 205 (333)
T ss_pred cCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH
Confidence 22222 799999999998765443
No 44
>KOG0660|consensus
Probab=99.96 E-value=5.5e-30 Score=205.29 Aligned_cols=171 Identities=18% Similarity=0.195 Sum_probs=142.8
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeec-CCCCCCeEEEEEeccCCCCHHHHHHh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTD-THNDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~-~~~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+|+.||..||||.+.. .........+..+|+.+|+.++|+||+.+.+++.. .......+|+|+++| +.+|...++.
T Consensus 42 ~~~~t~~~VAIKKi~~--~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~ 118 (359)
T KOG0660|consen 42 KDKRTGEKVAIKKILN--PFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKS 118 (359)
T ss_pred EEcCCCCEeehhhhhh--hhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHc
Confidence 4788999999998862 24446778899999999999999999999999876 223345799999999 5799999987
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLS 149 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~ 149 (218)
.. .++...+..+++|++.||.|+|| .+|+||||||.|+|++.++.+||+|||+++.. ....|.|
T Consensus 119 ~~----~L~d~H~q~f~YQiLrgLKyiHS--AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRW 192 (359)
T KOG0660|consen 119 QQ----DLTDDHAQYFLYQILRGLKYIHS--ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRW 192 (359)
T ss_pred Cc----cccHHHHHHHHHHHHHhcchhhc--ccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeee
Confidence 53 39999999999999999999999 55999999999999999999999999999863 3456899
Q ss_pred ccccccCC---CCch----------hhhhhhCCCCCCcchhhhh
Q psy238 150 ATRQTYGR---PISG----------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 150 y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~~ee~ 180 (218)
|.|||+.. .++. +.||++|+.-|.++..-.+
T Consensus 193 YRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Q 236 (359)
T KOG0660|consen 193 YRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQ 236 (359)
T ss_pred ecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHH
Confidence 99999732 2322 6799999999987755433
No 45
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96 E-value=5.8e-29 Score=201.81 Aligned_cols=167 Identities=11% Similarity=0.119 Sum_probs=136.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+....... ......+.+|+.++..++|++|+.+++++.+.+ .+++||+|+++++|..++....
T Consensus 21 ~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~~~~~~ 95 (285)
T cd05631 21 VRATGKMYACKKLEKKRIKK-RKGEAMALNEKRILEKVNSRFVVSLAYAYETKD----ALCLVLTIMNGGDLKFHIYNMG 95 (285)
T ss_pred EecCCceEEEEEeeHhhhhh-hhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC----eEEEEEEecCCCcHHHHHHhhC
Confidence 35689999999987432221 223456788999999999999999999887644 5899999999999998886543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE 171 (285)
T cd05631 96 N--PGFDEQRAIFYAAELCCGLEDLQR--ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPE 171 (285)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHh
Confidence 2 358999999999999999999999 7799999999999999999999999998864 3456899999999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+.. .++. +|++++|+.||.....
T Consensus 172 ~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 206 (285)
T cd05631 172 VINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE 206 (285)
T ss_pred hhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCc
Confidence 732 2222 7999999999987654
No 46
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=4e-29 Score=209.38 Aligned_cols=166 Identities=14% Similarity=0.210 Sum_probs=136.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++...... .......+.+|+.++..++||||+++++++.+.. .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~----~~~lv~E~~~~g~L~~~l~~~- 95 (364)
T cd05599 22 KKDTGHIYAMKKLRKSEML-EKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN----YLYLIMEYLPGGDMMTLLMKK- 95 (364)
T ss_pred ECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC----eEEEEECCCCCcHHHHHHHHc-
Confidence 4568999999999743211 1234456788999999999999999999987754 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------------- 142 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------------- 142 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++...
T Consensus 96 ---~~l~~~~~~~~~~qi~~aL~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~ 170 (364)
T cd05599 96 ---DTFTEEETRFYIAETILAIDSIHK--LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSN 170 (364)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccc
Confidence 348999999999999999999999 77999999999999999999999999987531
Q ss_pred ---------------------------cCCCcccccccccCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 143 ---------------------------ENKKYLSATRQTYGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 143 ---------------------------~~~~t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
...||+.|+|||+.. .++. +|+|++|..||......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~ 245 (364)
T cd05599 171 FLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ 245 (364)
T ss_pred ccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH
Confidence 235899999999622 1111 79999999999866543
No 47
>KOG0586|consensus
Probab=99.96 E-value=1.3e-29 Score=214.68 Aligned_cols=167 Identities=22% Similarity=0.306 Sum_probs=144.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..||..||||+++.. .......+.+.+|+++|..++|||||+++++..... .+|+||||+.+|.+.+++..+.
T Consensus 77 ~~~t~~~VaiK~idkt--~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~----~lylV~eya~~ge~~~yl~~~g 150 (596)
T KOG0586|consen 77 HILTGTEVAIKIIDKT--QLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA----TLYLVMEYASGGELFDYLVKHG 150 (596)
T ss_pred ecCCCceEEEEEehhc--ccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc----eeEEEEEeccCchhHHHHHhcc
Confidence 4568999999999854 333555667999999999999999999999987755 4999999999999999999875
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
+ ..+..+..++.|+++|++|||+ +.|+|||||++|||++.+.+++|+|||++.. .+.+|++.|.|||
T Consensus 151 r----~~e~~ar~~F~q~vsaveYcH~--k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPE 224 (596)
T KOG0586|consen 151 R----MKEKEARAKFRQIVSAVEYCHS--KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPE 224 (596)
T ss_pred c----chhhhhhhhhHHHHHHHHHHhh--cceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChH
Confidence 4 6678999999999999999999 7799999999999999999999999999987 7889999999999
Q ss_pred c--CCCCch-----------hhhhhhCCCCCCcchhhhh
Q psy238 155 Y--GRPISG-----------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 155 ~--~~~~~~-----------~~ei~tg~~p~~~~~~ee~ 180 (218)
+ +..+.. +|-+++|..||++..-.+-
T Consensus 225 l~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L 263 (596)
T KOG0586|consen 225 LFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL 263 (596)
T ss_pred hhcCcccCCcceehhhhhhhheeeeecccccCCcccccc
Confidence 7 222222 6889999999997765443
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96 E-value=5.2e-29 Score=207.19 Aligned_cols=162 Identities=17% Similarity=0.198 Sum_probs=134.3
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+..... ........+.+|+.++..++||||+++++++.+.. .+|+||||+++++|.+++....
T Consensus 56 ~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----~~~lv~Ey~~~g~L~~~i~~~~---- 126 (340)
T PTZ00426 56 FPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES----YLYLVLEFVIGGEFFTFLRRNK---- 126 (340)
T ss_pred CeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC----EEEEEEeCCCCCcHHHHHHHcC----
Confidence 36899999874321 11334567889999999999999999999997644 6999999999999999998653
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC--CC
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG--RP 158 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~--~~ 158 (218)
.+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|||+. ..
T Consensus 127 ~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 204 (340)
T PTZ00426 127 RFPNDVGCFYAAQIVLIFEYLQS--LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVG 204 (340)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCC
Confidence 48999999999999999999999 7799999999999999999999999999864 345789999999972 11
Q ss_pred Cch----------hhhhhhCCCCCCcchhh
Q psy238 159 ISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 159 ~~~----------~~ei~tg~~p~~~~~~e 178 (218)
++. +|+|++|..||......
T Consensus 205 ~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 234 (340)
T PTZ00426 205 HGKAADWWTLGIFIYEILVGCPPFYANEPL 234 (340)
T ss_pred CCccccccchhhHHHHHhcCCCCCCCCCHH
Confidence 111 79999999999876543
No 49
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=5.3e-29 Score=208.49 Aligned_cols=167 Identities=14% Similarity=0.192 Sum_probs=137.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+..|+.++..++||+|+++++++.+.. .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~- 95 (360)
T cd05627 22 KKDTGHIYAMKILRKADM-LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR----NLYLIMEFLPGGDMMTLLMKK- 95 (360)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----EEEEEEeCCCCccHHHHHHhc-
Confidence 356889999999974321 11334567888999999999999999999987643 699999999999999999765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++..
T Consensus 96 ---~~l~~~~~~~~~~qi~~~L~~lH~--~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~ 170 (360)
T cd05627 96 ---DTLSEEATQFYIAETVLAIDAIHQ--LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSD 170 (360)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccc
Confidence 348999999999999999999999 7799999999999999999999999998652
Q ss_pred -----------------------ccCCCccccccccc--CCCCch----------hhhhhhCCCCCCcchhhh
Q psy238 142 -----------------------IENKKYLSATRQTY--GRPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 142 -----------------------~~~~~t~~y~aPE~--~~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
....||+.|+|||+ +..++. +|+|++|..||......+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~ 243 (360)
T cd05627 171 FSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE 243 (360)
T ss_pred ccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHH
Confidence 12468999999997 222222 799999999998765543
No 50
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=9.6e-29 Score=204.21 Aligned_cols=167 Identities=17% Similarity=0.189 Sum_probs=135.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|++...... .......+..|+.++..++||||+.+++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~----~~~lv~E~~~~~~L~~~l~~~- 89 (325)
T cd05594 16 EKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----RLCFVMEYANGGELFFHLSRE- 89 (325)
T ss_pred ECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC----EEEEEEeCCCCCcHHHHHHhc-
Confidence 4568999999999743211 1234456778999999999999999999887644 699999999999999988754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.||+.||.|||+. .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 90 ---~~l~~~~~~~~~~qi~~aL~~lH~~-~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP 165 (325)
T cd05594 90 ---RVFSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 165 (325)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCH
Confidence 3489999999999999999999961 3599999999999999999999999998753 234689999999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+. ..++. +|++++|..||.....+
T Consensus 166 E~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~ 202 (325)
T cd05594 166 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 202 (325)
T ss_pred HHHccCCCCCccccccccceeeeeccCCCCCCCCCHH
Confidence 972 22222 79999999999766543
No 51
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=9.3e-29 Score=207.88 Aligned_cols=165 Identities=13% Similarity=0.137 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ........+..|+.+++.++||||+++++++.+.. .+|+||||+++++|.+++...
T Consensus 64 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~----~~~lv~Ey~~gg~L~~~l~~~- 137 (370)
T cd05621 64 HKSSQKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK----YLYMVMEYMPGGDLVNLMSNY- 137 (370)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----EEEEEEcCCCCCcHHHHHHhc-
Confidence 356789999999974211 11233456788999999999999999999987643 699999999999999999653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
.+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 138 ----~~~~~~~~~~~~qil~aL~~LH~--~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~a 211 (370)
T cd05621 138 ----DVPEKWAKFYTAEVVLALDAIHS--MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYIS 211 (370)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCC
Confidence 38899999999999999999999 7799999999999999999999999998864 24568999999
Q ss_pred cccCC--C----Cch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYGR--P----ISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~~--~----~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+.. . ++. +|+|++|..||......
T Consensus 212 PE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~ 253 (370)
T cd05621 212 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 253 (370)
T ss_pred HHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH
Confidence 99622 1 111 79999999999866543
No 52
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=1.3e-28 Score=199.29 Aligned_cols=169 Identities=14% Similarity=0.131 Sum_probs=136.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+...... .......+..|+.+++.++||||+.+++++.... .+|+||||+++++|..++....
T Consensus 14 ~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~g~L~~~~~~~~ 88 (280)
T cd05608 14 MRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT----DLCLVMTIMNGGDLRYHIYNVD 88 (280)
T ss_pred EccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC----eEEEEEeCCCCCCHHHHHHhcc
Confidence 4568999999998743211 1223456778999999999999999998886643 5899999999999998886543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.....+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 89 ~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aP 166 (280)
T cd05608 89 EENPGFPEPRACFYTAQIISGLEHLHQ--RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAP 166 (280)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCH
Confidence 333569999999999999999999999 7799999999999999999999999998864 234688999999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+. ..++. +|++++|..||.....
T Consensus 167 E~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 202 (280)
T cd05608 167 ELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 202 (280)
T ss_pred HHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCc
Confidence 972 22222 7999999999976543
No 53
>KOG4717|consensus
Probab=99.96 E-value=4.6e-29 Score=208.13 Aligned_cols=170 Identities=18% Similarity=0.265 Sum_probs=144.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..||+.||||++.... ........+.+|+.-|+.++|||||+||.+.-.. ..+|+|+|+-++|+|.+||-.+.
T Consensus 39 HVFTGekVAVKviDKTK--lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ----TKlyLiLELGD~GDl~DyImKHe 112 (864)
T KOG4717|consen 39 HVFTGEKVAVKVIDKTK--LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ----TKLYLILELGDGGDLFDYIMKHE 112 (864)
T ss_pred hhcccceeEEEEecccc--cchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc----ceEEEEEEecCCchHHHHHHhhh
Confidence 35689999999998643 2345567889999999999999999999987442 36999999999999999998876
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc-------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT-------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~-------~~~~~t~~y~aP 153 (218)
. .+.++.+..||+||+.|+.|||.. .+|||||||+|+++.+ -|.++|.|||++.. .+.+|++.|-||
T Consensus 113 ~---Gl~E~La~kYF~QI~~AI~YCHqL--HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAP 187 (864)
T KOG4717|consen 113 E---GLNEDLAKKYFAQIVHAISYCHQL--HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAP 187 (864)
T ss_pred c---cccHHHHHHHHHHHHHHHHHHhhh--hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCc
Confidence 3 499999999999999999999995 4999999999998865 49999999999865 788999999999
Q ss_pred cc--CCCCch-----------hhhhhhCCCCCCcchhhhhHH
Q psy238 154 TY--GRPISG-----------QYEIVTKTNNVTEKKKEKEEE 182 (218)
Q Consensus 154 E~--~~~~~~-----------~~ei~tg~~p~~~~~~ee~~~ 182 (218)
|+ |..++. +|.+++|+.||.+..+.|..-
T Consensus 188 EILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT 229 (864)
T KOG4717|consen 188 EILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT 229 (864)
T ss_pred hhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh
Confidence 96 444433 799999999999887776543
No 54
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=1.3e-28 Score=203.29 Aligned_cols=166 Identities=20% Similarity=0.270 Sum_probs=132.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHH-HhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~-~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++....... ......+..|.. +++.++||||+++++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~ 90 (323)
T cd05575 16 HKADGKFYAVKVLQKKAILK-KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD----KLYFVLDYVNGGELFFHLQRE 90 (323)
T ss_pred ECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC----EEEEEEcCCCCCCHHHHHHhc
Confidence 45689999999997432211 222344555544 567889999999999887643 689999999999999998764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~~~~~~~~~~~~qi~~~l~~lH~--~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (323)
T cd05575 91 ----RSFPEPRARFYAAEIASALGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLA 164 (323)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcC
Confidence 348999999999999999999999 7799999999999999999999999998754 23468999999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+.. .++. +|+|++|..||.....+
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~ 202 (323)
T cd05575 165 PEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA 202 (323)
T ss_pred hhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH
Confidence 99722 2221 79999999999876543
No 55
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=9.7e-29 Score=203.55 Aligned_cols=164 Identities=16% Similarity=0.198 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... .......+..|+.++..++||||+++++++...+ .+|+||||+++++|.+++...
T Consensus 20 ~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 92 (318)
T cd05582 20 GPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG----KLYLILDFLRGGDLFTRLSKE- 92 (318)
T ss_pred cCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC----EEEEEEcCCCCCcHHHHHHHc-
Confidence 346889999999984321 1233456778999999999999999999987643 689999999999999998754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....|++.|+||
T Consensus 93 ---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aP 167 (318)
T cd05582 93 ---VMFTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 167 (318)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCH
Confidence 348999999999999999999999 6799999999999999999999999998764 234678999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. +|+|++|..||.....
T Consensus 168 E~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~ 203 (318)
T cd05582 168 EVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR 203 (318)
T ss_pred HHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH
Confidence 9722 2221 6999999999976544
No 56
>KOG0658|consensus
Probab=99.96 E-value=2.4e-30 Score=207.73 Aligned_cols=167 Identities=20% Similarity=0.314 Sum_probs=137.1
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCC-CCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND-KPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
.++++.||||.+-.... --.+|+++|+.+.|||||+|.-+|....++ .-.+.+||||++ .+|..+++...
T Consensus 46 ~e~~~~vAIKKv~~d~r--------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~ 116 (364)
T KOG0658|consen 46 RETEEEVAIKKVLQDKR--------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYT 116 (364)
T ss_pred cCCCceeEEEEecCCCC--------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHh
Confidence 46789999998864311 234689999999999999999888776654 335669999996 69999999876
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc-------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT-------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~-------~~~~~t~~y~aP 153 (218)
.+...+|.-.+.-+..||+.||.|||+ .+|+||||||.|+|+|.+ |.+||||||.|.. .+...|..|.||
T Consensus 117 ~~~~~mp~~~iKLYt~Qlfrgl~yLh~--~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaP 194 (364)
T KOG0658|consen 117 RANQRMPLLEIKLYTYQLFRGLAYLHS--HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAP 194 (364)
T ss_pred hcCCCCceeeeHHHHHHHHHHHHHHHh--cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCH
Confidence 666779999999999999999999999 779999999999999987 9999999999876 455678899999
Q ss_pred cc--CC-CCch----------hhhhhhCCCCCCcchhhhh
Q psy238 154 TY--GR-PISG----------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 154 E~--~~-~~~~----------~~ei~tg~~p~~~~~~ee~ 180 (218)
|+ |. .++. +.|++-|..-|.+.+.-.+
T Consensus 195 ELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ 234 (364)
T KOG0658|consen 195 ELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ 234 (364)
T ss_pred HHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH
Confidence 97 22 2222 7899999999988665444
No 57
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=1.7e-28 Score=212.56 Aligned_cols=162 Identities=20% Similarity=0.229 Sum_probs=134.6
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+... .......+..|+.+|..++||||++++++|...+ .+|+||||+++++|.+++........
T Consensus 93 ~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~~~~~~ 164 (478)
T PTZ00267 93 KEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSDD----KLLLIMEYGSGGDLNKQIKQRLKEHL 164 (478)
T ss_pred CeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC----EEEEEEECCCCCCHHHHHHHHHhccC
Confidence 678999977532 2344566788999999999999999999997654 69999999999999999876544445
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTY 155 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~ 155 (218)
++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.++|+|||++.. ....||+.|+|||+
T Consensus 165 ~l~~~~~~~i~~qi~~aL~~lH~--~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~ 242 (478)
T PTZ00267 165 PFQEYEVGLLFYQIVLALDEVHS--RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPEL 242 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh--CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhH
Confidence 68999999999999999999999 7799999999999999999999999999864 23358999999997
Q ss_pred C--CCCch----------hhhhhhCCCCCCcchh
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
. ..++. +++|++|..||.....
T Consensus 243 ~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~ 276 (478)
T PTZ00267 243 WERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ 276 (478)
T ss_pred hCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 3 22222 6899999999976544
No 58
>KOG0197|consensus
Probab=99.96 E-value=3.6e-29 Score=209.17 Aligned_cols=166 Identities=22% Similarity=0.264 Sum_probs=137.4
Q ss_pred CCCc-EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGV-EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~-~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.+|. .||+|.+... ....+.+.+|+++|.+|+|++||+|+++|....+ +|||||||+.|+|.++|....
T Consensus 227 ~~~~~~vavk~ik~~-----~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p----iyIVtE~m~~GsLl~yLr~~~- 296 (468)
T KOG0197|consen 227 WNGSTKVAVKTIKEG-----SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP----IYIVTEYMPKGSLLDYLRTRE- 296 (468)
T ss_pred EcCCCcccceEEecc-----ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCc----eEEEEEecccCcHHHHhhhcC-
Confidence 4455 7999999843 2344677899999999999999999999987553 999999999999999999843
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQ 153 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aP 153 (218)
+..+.....+.|+.|||.|++||.+ +++|||||..+||||+++..+||+|||+++. ....-...|.||
T Consensus 297 -~~~l~~~~Ll~~a~qIaeGM~YLes--~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAP 373 (468)
T KOG0197|consen 297 -GGLLNLPQLLDFAAQIAEGMAYLES--KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAP 373 (468)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHHh--CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCH
Confidence 3569999999999999999999999 7799999999999999999999999999986 233446789999
Q ss_pred ccCC--CCch----------hhhhhh-CCCCCCcchhhhhHH
Q psy238 154 TYGR--PISG----------QYEIVT-KTNNVTEKKKEKEEE 182 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~t-g~~p~~~~~~ee~~~ 182 (218)
|... .++. ++||+| |+.||.+....+.-+
T Consensus 374 Ea~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~ 415 (468)
T KOG0197|consen 374 EALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE 415 (468)
T ss_pred HHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH
Confidence 9622 3333 677766 888888887766543
No 59
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=1.7e-28 Score=202.47 Aligned_cols=167 Identities=14% Similarity=0.176 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++..... ........+..|..++..+ +||||+.+++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~----~~~lv~E~~~~~~L~~~l~~~ 90 (321)
T cd05591 16 LKGTDEVYAIKVLKKDVI-LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD----RLFFVMEYVNGGDLMFQIQRS 90 (321)
T ss_pred ECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----eEEEEEeCCCCCcHHHHHHHc
Confidence 356789999999974321 1123445667788888766 8999999999997654 689999999999999998765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. .+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ~----~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (321)
T cd05591 91 R----KFDEPRSRFYAAEVTLALMFLHR--HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIA 164 (321)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccC
Confidence 3 48999999999999999999999 7799999999999999999999999998764 33468999999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcchhhh
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||+.. .++. +|+|++|..||.....++
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~ 203 (321)
T cd05591 165 PEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD 203 (321)
T ss_pred HHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH
Confidence 99622 2222 799999999998765443
No 60
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=1.3e-28 Score=203.79 Aligned_cols=162 Identities=17% Similarity=0.213 Sum_probs=134.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++.... .........+..|+.++..+ +||||++++++|.+.. .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~~~~~ 90 (329)
T cd05588 16 LKKTRRIYAMKVIKKEL-VNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES----RLFFVIEFVSGGDLMFHMQRQ 90 (329)
T ss_pred ECCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC----EEEEEEeCCCCCCHHHHHHHc
Confidence 35678999999998432 11233445678899999888 7999999999987654 689999999999999988754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (329)
T cd05588 91 ----RKLPEEHARFYSAEISLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIA 164 (329)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccC
Confidence 349999999999999999999999 7799999999999999999999999998753 34578999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCc
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~ 174 (218)
||+. ..++. +|++++|+.||+.
T Consensus 165 PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred HHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 9972 22221 7999999999974
No 61
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=1.5e-28 Score=202.79 Aligned_cols=167 Identities=16% Similarity=0.200 Sum_probs=135.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++..... ........+..|+.++..+ +||||+++++++.... .+|+||||+++++|.+++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~----~~~iv~Ey~~~g~L~~~i~~~ 90 (320)
T cd05590 16 LKESGRLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD----RLFFVMEFVNGGDLMFHIQKS 90 (320)
T ss_pred EcCCCCEEEEEEEEHHHH-hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC----EEEEEEcCCCCchHHHHHHHc
Confidence 456889999999974311 1123445667788888776 7999999999987644 689999999999999988765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. .+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ~----~l~~~~~~~~~~ql~~~L~~lH~--~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a 164 (320)
T cd05590 91 R----RFDEARARFYAAEITSALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIA 164 (320)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccC
Confidence 3 48999999999999999999999 7799999999999999999999999998764 33568999999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcchhhh
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||+.. .++. +|++++|..||......+
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~ 203 (320)
T cd05590 165 PEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD 203 (320)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH
Confidence 99722 2111 799999999998765443
No 62
>KOG0986|consensus
Probab=99.96 E-value=5.3e-30 Score=210.58 Aligned_cols=166 Identities=14% Similarity=0.175 Sum_probs=139.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..||..||+|.+... +..........++|-.||+.++.|+||.+-..|...+ .+|+||..|.||+|.-.|.+.+.
T Consensus 207 raTGKMYAcKkL~KK-RiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd----~LClVLtlMNGGDLkfHiyn~g~ 281 (591)
T KOG0986|consen 207 RATGKMYACKKLDKK-RIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD----ALCLVLTLMNGGDLKFHIYNHGN 281 (591)
T ss_pred ecchhhHHHHHHHHH-HHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC----ceEEEEEeecCCceeEEeeccCC
Confidence 357888888887643 2222445567789999999999999999988887765 59999999999999999988764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY 155 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~ 155 (218)
..|++..++.|+.+|+.||.+||+ .+||+|||||+|||+|+.|+++|+|+|++.. ...+||.+|||||+
T Consensus 282 --~gF~e~ra~FYAAEi~cGLehlH~--~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEv 357 (591)
T KOG0986|consen 282 --PGFDEQRARFYAAEIICGLEHLHR--RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEV 357 (591)
T ss_pred --CCCchHHHHHHHHHHHhhHHHHHh--cceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHH
Confidence 569999999999999999999999 7799999999999999999999999999865 55699999999997
Q ss_pred CC--CCch----------hhhhhhCCCCCCcchh
Q psy238 156 GR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 156 ~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
.. .++. +|+|+.|..||....+
T Consensus 358 l~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 358 LQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred HcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 22 2222 7999999999965443
No 63
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=1.8e-28 Score=202.60 Aligned_cols=166 Identities=19% Similarity=0.250 Sum_probs=132.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHH-HhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~-~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++....... ......+..|.. +++.++||||+++++++...+ .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~ 90 (325)
T cd05604 16 RKLDGKCYAVKVLQKKIVLN-RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE----KLYFVLDFVNGGELFFHLQRE 90 (325)
T ss_pred ECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC----EEEEEEcCCCCCCHHHHHHHc
Confidence 45689999999997432111 223344555554 467789999999999887644 589999999999999888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.||+.||.|||+ .||+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~~~~~~~~~~~~qi~~al~~lH~--~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a 164 (325)
T cd05604 91 ----RSFPEPRARFYAAEIASALGYLHS--INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLA 164 (325)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCC
Confidence 348999999999999999999999 7799999999999999999999999998764 23468999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+. ..++. +|+|++|..||......
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~ 202 (325)
T cd05604 165 PEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA 202 (325)
T ss_pred HHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH
Confidence 9972 22222 79999999999766543
No 64
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=2e-28 Score=205.83 Aligned_cols=165 Identities=13% Similarity=0.150 Sum_probs=134.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ........+..|+.++..++||||+++++++.+.. .+|+||||+++++|.+++...
T Consensus 64 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~----~~~lv~Ey~~gg~L~~~l~~~- 137 (370)
T cd05596 64 HKSSKQVYAMKLLSKFEM-IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK----YLYMVMEYMPGGDLVNLMSNY- 137 (370)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC----EEEEEEcCCCCCcHHHHHHhc-
Confidence 456889999999974211 11233455778999999999999999999887644 699999999999999998653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
.+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 138 ----~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~a 211 (370)
T cd05596 138 ----DIPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYIS 211 (370)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeEC
Confidence 38899999999999999999999 7799999999999999999999999998754 23568999999
Q ss_pred cccCCC------Cch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYGRP------ISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~~~------~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+... ++. +|+|++|..||.+....
T Consensus 212 PE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~ 253 (370)
T cd05596 212 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 253 (370)
T ss_pred HHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH
Confidence 996221 111 79999999999876543
No 65
>PHA02988 hypothetical protein; Provisional
Probab=99.96 E-value=3.3e-28 Score=197.43 Aligned_cols=169 Identities=20% Similarity=0.232 Sum_probs=138.2
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||||.+.... .........+.+|+.+|..++||||+++++++.+...+...+++||||+++|+|.+++...
T Consensus 41 ~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--- 116 (283)
T PHA02988 41 FNNKEVIIRTFKKFH-KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--- 116 (283)
T ss_pred ECCEEEEEEeccccc-cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC---
Confidence 468899999997532 2223345678899999999999999999999877333335689999999999999999864
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccCC-
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYGR- 157 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~~- 157 (218)
..+++.....++.|++.||.|||+. .+++||||+|+|||++.++.++|+|||++.. ....++..|+|||+..
T Consensus 117 -~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~ 194 (283)
T PHA02988 117 -KDLSFKTKLDMAIDCCKGLYNLYKY-TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLND 194 (283)
T ss_pred -CCCChhHHHHHHHHHHHHHHHHHhc-CCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhh
Confidence 3488999999999999999999983 2599999999999999999999999999874 3456889999999842
Q ss_pred ---CCch----------hhhhhhCCCCCCcchhh
Q psy238 158 ---PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 158 ---~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
.++. +|+|++|..||......
T Consensus 195 ~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~ 228 (283)
T PHA02988 195 IFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK 228 (283)
T ss_pred ccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence 2222 69999999999876543
No 66
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96 E-value=2.5e-28 Score=205.30 Aligned_cols=164 Identities=13% Similarity=0.144 Sum_probs=134.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++...... .......+.+|+.++..++||||+++++++.... .+|+||||+++++|.+++...
T Consensus 64 ~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~----~~~lv~Ey~~gg~L~~~~~~~- 137 (371)
T cd05622 64 HKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR----YLYMVMEYMPGGDLVNLMSNY- 137 (371)
T ss_pred ECCCCcEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC----EEEEEEcCCCCCcHHHHHHhc-
Confidence 4568899999998743211 1233456778999999999999999999987643 699999999999999998653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
.+++..+..++.||+.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 138 ----~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~a 211 (371)
T cd05622 138 ----DVPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 211 (371)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccC
Confidence 38899999999999999999999 7799999999999999999999999998854 24568999999
Q ss_pred cccCC--C----Cch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYGR--P----ISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~--~----~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+.. . ++. +|+|++|..||.....
T Consensus 212 PE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~ 252 (371)
T cd05622 212 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 252 (371)
T ss_pred HHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH
Confidence 99722 1 111 7999999999986554
No 67
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=2.5e-28 Score=201.30 Aligned_cols=165 Identities=19% Similarity=0.234 Sum_probs=131.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHH-HhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~-~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++....... ......+..|+. +++.++||||+++++++.+.. .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~ 90 (321)
T cd05603 16 RKSDGSFYAVKVLQKKTILK-KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE----KLYFVLDYVNGGELFFHLQRE 90 (321)
T ss_pred ECCCCCEEEEEEEEHHHHHH-hhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC----EEEEEEcCCCCCCHHHHHHHc
Confidence 45678999999997432111 223344555554 578899999999999887644 689999999999999888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~~~~~~~~~~~~qi~~~L~~lH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (321)
T cd05603 91 ----RCFLEPRARFYAAEVASAIGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLA 164 (321)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCC
Confidence 348899999999999999999999 7799999999999999999999999998764 23468899999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+. ..++. +|+|++|..||.....
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 201 (321)
T cd05603 165 PEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV 201 (321)
T ss_pred HHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH
Confidence 9962 22221 7999999999977644
No 68
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=2.6e-28 Score=202.06 Aligned_cols=163 Identities=15% Similarity=0.189 Sum_probs=134.0
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+|..||+|++..............+..|+.++..+ +||+|+.+++++.... .+++||||+++++|.+++....
T Consensus 25 ~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~ 100 (332)
T cd05614 25 HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA----KLHLILDYVSGGEMFTHLYQRD 100 (332)
T ss_pred CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC----EEEEEEeCCCCCcHHHHHHHcC
Confidence 4678999999997432222233456678899999999 5899999999887643 5899999999999999987643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
.+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 101 ----~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~a 174 (332)
T cd05614 101 ----NFSEDEVRFYSGEIILALEHLHK--LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMA 174 (332)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccC
Confidence 48999999999999999999999 7799999999999999999999999998764 23568999999
Q ss_pred cccCC--C-Cch----------hhhhhhCCCCCCcc
Q psy238 153 QTYGR--P-ISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 153 PE~~~--~-~~~----------~~ei~tg~~p~~~~ 175 (218)
||+.. . .+. +|++++|..||...
T Consensus 175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 99622 1 111 79999999999754
No 69
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=3.7e-28 Score=200.05 Aligned_cols=166 Identities=14% Similarity=0.181 Sum_probs=132.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++...... .......+..|..++..+ +||||+++++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~----~~~lv~e~~~gg~L~~~~~~~ 90 (316)
T cd05592 16 LKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE----HLFFVMEYLNGGDLMFHIQSS 90 (316)
T ss_pred ECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EEEEEEcCCCCCcHHHHHHHc
Confidence 3567889999999743211 122334555666666654 8999999999987643 699999999999999998764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. .+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ~----~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~a 164 (316)
T cd05592 91 G----RFDEARARFYAAEIICGLQFLHK--KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIA 164 (316)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccC
Confidence 3 48999999999999999999999 7799999999999999999999999998864 33568999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+. ..++. ++++++|..||.+....
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~ 202 (316)
T cd05592 165 PEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED 202 (316)
T ss_pred HHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH
Confidence 9972 22222 79999999999876543
No 70
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=3.3e-28 Score=201.01 Aligned_cols=167 Identities=19% Similarity=0.230 Sum_probs=131.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHH-HhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~-~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++....... ......+..|.. ++..+.||||+++++++...+ .+|+||||+++++|.+++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~ 90 (325)
T cd05602 16 HKAEEKFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----KLYFVLDYINGGELFYHLQRE 90 (325)
T ss_pred ECCCCCEEEEEEEEHHHHHh-hhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC----eEEEEEeCCCCCcHHHHHHhc
Confidence 45678899999997432111 122234444443 567889999999999987654 589999999999999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.||+.||.|||+ .||+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~~~~~~~~~~~~qi~~~L~~lH~--~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~a 164 (325)
T cd05602 91 ----RCFLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLA 164 (325)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccC
Confidence 348889999999999999999999 7799999999999999999999999998763 33568999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||+. ..++. +|+|++|..||......+
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 203 (325)
T cd05602 165 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203 (325)
T ss_pred HHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH
Confidence 9962 22221 799999999998665443
No 71
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=3.3e-28 Score=201.47 Aligned_cols=162 Identities=19% Similarity=0.229 Sum_probs=133.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++..... ........+..|+.++..+ +||||+++++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~----~~~lv~E~~~~~~L~~~~~~~ 90 (329)
T cd05618 16 LKKTERIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ 90 (329)
T ss_pred ECCCCCEEEEEEEEhhHh-cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC----EEEEEEeCCCCCCHHHHHHHc
Confidence 456889999999984321 1233455677888888776 8999999999987644 689999999999999888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~l~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a 164 (329)
T cd05618 91 ----RKLPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 164 (329)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccC
Confidence 349999999999999999999999 7799999999999999999999999998764 23568999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCc
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~ 174 (218)
||+. ..++. +|++++|..||..
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred HHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 9972 22221 7999999999963
No 72
>KOG0690|consensus
Probab=99.96 E-value=1.2e-29 Score=201.39 Aligned_cols=168 Identities=18% Similarity=0.190 Sum_probs=142.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
.+.+|+.||+|+++..-. -........+.|-.+|+..+||++..|-..|...+ ++|+||||+.||.|.-.|....
T Consensus 189 EKat~k~YAiKIlkKevi-iakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d----rlCFVMeyanGGeLf~HLsrer 263 (516)
T KOG0690|consen 189 EKATGKLYAIKILKKEVI-IAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD----RLCFVMEYANGGELFFHLSRER 263 (516)
T ss_pred ecccCceeehhhhhhhhe-eehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc----eEEEEEEEccCceEeeehhhhh
Confidence 367899999999985322 22445566778889999999999999977776544 7999999999999998888764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.++++.++.+-..|++||.|||+ ++||.||||.+|+|+|.+|+++|+|||++.- .+.+||+.|+||
T Consensus 264 ----~FsE~RtRFYGaEIvsAL~YLHs--~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAP 337 (516)
T KOG0690|consen 264 ----VFSEDRTRFYGAEIVSALGYLHS--RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAP 337 (516)
T ss_pred ----cccchhhhhhhHHHHHHhhhhhh--CCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCc
Confidence 39999999999999999999999 7799999999999999999999999999865 678999999999
Q ss_pred ccCCCCch------------hhhhhhCCCCCCcchhhhh
Q psy238 154 TYGRPISG------------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 154 E~~~~~~~------------~~ei~tg~~p~~~~~~ee~ 180 (218)
|+....+. +|||++|+.||.....++.
T Consensus 338 EVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL 376 (516)
T KOG0690|consen 338 EVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL 376 (516)
T ss_pred hhhccccccceeehhhhhHHHHHHHhccCcccccchhHH
Confidence 97442222 8999999999987766654
No 73
>KOG0032|consensus
Probab=99.96 E-value=3.4e-28 Score=203.49 Aligned_cols=169 Identities=19% Similarity=0.227 Sum_probs=143.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..||..+|+|++......+ ......+.+|+.+|+.+. |||||.++++|.+.. .+++|||++.||.|.+.+...
T Consensus 56 ~~~tg~~~A~K~i~k~~~~~-~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~----~~~lvmEL~~GGeLfd~i~~~ 130 (382)
T KOG0032|consen 56 EKSTGKEVACKVIPKRKLRG-KEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD----SVYLVMELCEGGELFDRIVKK 130 (382)
T ss_pred ecCCCceeEEEEeehhhccc-cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC----eEEEEEEecCCchHHHHHHHc
Confidence 46789999999998543322 224568899999999997 999999999998866 599999999999999999876
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC----CcEEEeecCcccc-------ccCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN----GLVKIGCDTYTHT-------IENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~----~~~ki~dfg~~~~-------~~~~~t~~ 149 (218)
.+++..+..++.|++.|+.|||+ .||+||||||+|+|+... +.++++|||++.. ...+||+.
T Consensus 131 -----~~sE~da~~~~~~il~av~~lH~--~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~ 203 (382)
T KOG0032|consen 131 -----HYSERDAAGIIRQILEAVKYLHS--LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPE 203 (382)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHh--CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCcc
Confidence 29999999999999999999999 669999999999999643 5799999999876 56799999
Q ss_pred ccccccCC--CCch----------hhhhhhCCCCCCcchhhhhHH
Q psy238 150 ATRQTYGR--PISG----------QYEIVTKTNNVTEKKKEKEEE 182 (218)
Q Consensus 150 y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ee~~~ 182 (218)
|+|||+.. +++. .|.|++|..||.+..+.+.-.
T Consensus 204 y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~ 248 (382)
T KOG0032|consen 204 YVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL 248 (382)
T ss_pred ccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH
Confidence 99999843 4433 688999999999887665443
No 74
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96 E-value=2.9e-28 Score=201.84 Aligned_cols=166 Identities=19% Similarity=0.219 Sum_probs=134.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|..+|..||||.+... .........+.+|+.+++.++||||+++++++..... ....+|+||||+. ++|.+++...
T Consensus 21 ~~~~~~~vaiK~~~~~--~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~ 97 (338)
T cd07859 21 DTHTGEKVAIKKINDV--FEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAN 97 (338)
T ss_pred ECCCCCEEEEEEechh--hccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhc
Confidence 5678999999998732 1112344568899999999999999999998865432 2246899999995 7999988754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~ 149 (218)
. .+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+|..
T Consensus 98 ~----~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~ 171 (338)
T cd07859 98 D----DLTPEHHQFFLYQLLRALKYIHT--ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 171 (338)
T ss_pred c----cCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCC
Confidence 3 48999999999999999999999 7799999999999999999999999999864 12468899
Q ss_pred ccccccCC----CCch----------hhhhhhCCCCCCcch
Q psy238 150 ATRQTYGR----PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 150 y~aPE~~~----~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+|||+.. .++. +|+|++|..||.+..
T Consensus 172 y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 172 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999732 2222 689999999997654
No 75
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=5.9e-28 Score=200.30 Aligned_cols=166 Identities=16% Similarity=0.204 Sum_probs=131.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.++..||||++... ........+.+|+.++..+ +||||+++++++.... ..+++||||+++|+|.+++.....
T Consensus 35 ~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~L~~~l~~~~~ 108 (338)
T cd05102 35 SSCNTVAVKMLKEG---ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN---GPLMVIVEFCKYGNLSNFLRAKRE 108 (338)
T ss_pred ccchhhheeccccc---cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC---CceEEEEecCCCCcHHHHHHhcch
Confidence 45678999998732 2233456789999999999 8999999999886543 358999999999999999976421
Q ss_pred c----------------------------------------------------------CCCCCHHHHHHHHHHHHHHHH
Q psy238 83 N----------------------------------------------------------VKKLPLSAWKRWCSQILSALS 104 (218)
Q Consensus 83 ~----------------------------------------------------------~~~~~~~~~~~~~~qi~~~l~ 104 (218)
. ..++++..+..++.||+.||.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~ 188 (338)
T cd05102 109 FFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGME 188 (338)
T ss_pred hcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 1 124778889999999999999
Q ss_pred HhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccccC--CCCch----------h
Q psy238 105 YLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTYG--RPISG----------Q 162 (218)
Q Consensus 105 ~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~~--~~~~~----------~ 162 (218)
|||+ .+|+||||||+|||++.++.++|+|||++.. ....++..|+|||+. ..++. +
T Consensus 189 ~LH~--~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 266 (338)
T cd05102 189 FLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 266 (338)
T ss_pred HHHH--CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH
Confidence 9999 7799999999999999999999999998864 123445789999962 22222 6
Q ss_pred hhhhh-CCCCCCcchh
Q psy238 163 YEIVT-KTNNVTEKKK 177 (218)
Q Consensus 163 ~ei~t-g~~p~~~~~~ 177 (218)
|+|++ |..||.+...
T Consensus 267 ~el~~~g~~pf~~~~~ 282 (338)
T cd05102 267 WEIFSLGASPYPGVQI 282 (338)
T ss_pred HHHHhCCCCCCCCCCc
Confidence 88987 9999976543
No 76
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=4.2e-28 Score=200.61 Aligned_cols=163 Identities=18% Similarity=0.228 Sum_probs=134.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++..... ........+..|+.++..+ +||+|+.+++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~ 90 (327)
T cd05617 16 LKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS----RLFLVIEYVNGGDLMFHMQRQ 90 (327)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC----EEEEEEeCCCCCcHHHHHHHc
Confidence 346788999999984321 1133456678899998888 6999999999987644 699999999999999988754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (327)
T cd05617 91 ----RKLPEEHARFYAAEICIALNFLHE--RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIA 164 (327)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCC
Confidence 349999999999999999999999 7799999999999999999999999998763 34568999999
Q ss_pred ccc--CCCCch----------hhhhhhCCCCCCcc
Q psy238 153 QTY--GRPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 153 PE~--~~~~~~----------~~ei~tg~~p~~~~ 175 (218)
||+ +..++. +|+|++|..||...
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 165 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred HHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 997 222222 79999999999654
No 77
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=9.7e-28 Score=194.66 Aligned_cols=167 Identities=13% Similarity=0.132 Sum_probs=135.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+...... .......+.+|+.++..++||||+.+++++.... .+|+||||+++++|.+++....
T Consensus 21 ~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~ 95 (285)
T cd05605 21 VRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----ALCLVLTLMNGGDLKFHIYNMG 95 (285)
T ss_pred EcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC----eEEEEEeccCCCcHHHHHHhcC
Confidence 4567899999999743211 1223456778999999999999999999886643 5999999999999999887543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....|+..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE 171 (285)
T cd05605 96 N--PGFDEERAVFYAAEITCGLEDLHR--ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPE 171 (285)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcH
Confidence 2 458999999999999999999999 7799999999999999999999999998865 2346789999999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+.. .++. +|++++|..||.+...
T Consensus 172 ~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~ 206 (285)
T cd05605 172 VVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE 206 (285)
T ss_pred HhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch
Confidence 732 1111 7999999999987544
No 78
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=5.9e-28 Score=199.44 Aligned_cols=165 Identities=15% Similarity=0.198 Sum_probs=131.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHh---hcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENL---TQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l---~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
+..+|..||||++...... .......+..|+.++ ..++||||+++++++.... .+|+||||+++++|..++.
T Consensus 20 ~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~----~~~lv~E~~~~~~L~~~~~ 94 (324)
T cd05589 20 YKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED----HVCFVMEYAAGGDLMMHIH 94 (324)
T ss_pred ECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC----EEEEEEcCCCCCcHHHHhh
Confidence 3568899999999743211 122345566666554 5678999999999987644 6999999999999998875
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
. ..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....|++.|
T Consensus 95 ~-----~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y 167 (324)
T cd05589 95 T-----DVFSEPRAVFYAACVVLGLQYLHE--NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEF 167 (324)
T ss_pred c-----CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccc
Confidence 4 348999999999999999999999 7799999999999999999999999998764 235689999
Q ss_pred cccccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 151 TRQTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 151 ~aPE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
+|||+. ..++. +|+|++|..||.+...+
T Consensus 168 ~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~ 207 (324)
T cd05589 168 LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE 207 (324)
T ss_pred cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH
Confidence 999962 22221 79999999999876543
No 79
>KOG0607|consensus
Probab=99.96 E-value=5.6e-29 Score=197.13 Aligned_cols=161 Identities=19% Similarity=0.229 Sum_probs=138.3
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
++..||.+||||++. ........++.+|++++... .|+||++|++||.+.. ++|+|||-|.||+|...|..
T Consensus 98 v~i~t~~EYAVKiid----Kq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----~FYLVfEKm~GGplLshI~~ 169 (463)
T KOG0607|consen 98 VSIQTGKEYAVKIID----KQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----RFYLVFEKMRGGPLLSHIQK 169 (463)
T ss_pred eeeccchhhhhhhhh----cCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc----eEEEEEecccCchHHHHHHH
Confidence 356899999999998 33456778999999999888 6999999999998865 69999999999999999998
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC---CcEEEeecCcccc---------------
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN---GLVKIGCDTYTHT--------------- 141 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~---~~~ki~dfg~~~~--------------- 141 (218)
+.. |++..+..++..|+.||.|||. +||.||||||+|||..+. .-+|||||.++..
T Consensus 170 ~~~----F~E~EAs~vvkdia~aLdFlH~--kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L 243 (463)
T KOG0607|consen 170 RKH----FNEREASRVVKDIASALDFLHT--KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPEL 243 (463)
T ss_pred hhh----ccHHHHHHHHHHHHHHHHHHhh--cCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccc
Confidence 754 9999999999999999999999 779999999999999654 4689999997654
Q ss_pred ccCCCcccccccccCCCCch-----------------hhhhhhCCCCCCcc
Q psy238 142 IENKKYLSATRQTYGRPISG-----------------QYEIVTKTNNVTEK 175 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~~~~~~-----------------~~ei~tg~~p~~~~ 175 (218)
.+.+|+..|||||+-..+.. +|=|++|-.||.+.
T Consensus 244 ~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 244 LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 56789999999997332222 78999999999744
No 80
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=5.6e-28 Score=199.91 Aligned_cols=168 Identities=13% Similarity=0.151 Sum_probs=137.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+..|+.++..++||||+.+++++.+.. .+|+||||+++++|.+++....
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 96 (330)
T cd05601 22 EKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD----NLYLVMEYQPGGDLLSLLNRYE 96 (330)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC----eEEEEECCCCCCCHHHHHHHhc
Confidence 456899999999985321 12334567788999999999999999999887643 5899999999999999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+|+.|+|
T Consensus 97 ---~~l~~~~~~~~~~qi~~aL~~lH~--~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~a 171 (330)
T cd05601 97 ---DQFDEDMAQFYLAELVLAIHSVHQ--MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIA 171 (330)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccC
Confidence 358999999999999999999999 7799999999999999999999999998864 12468999999
Q ss_pred cccCC--------CCch----------hhhhhhCCCCCCcchhhh
Q psy238 153 QTYGR--------PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~~--------~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||+.. .++. +|+|++|..||......+
T Consensus 172 PE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~ 216 (330)
T cd05601 172 PEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK 216 (330)
T ss_pred HHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH
Confidence 99732 1111 799999999997665433
No 81
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=1.6e-27 Score=197.50 Aligned_cols=165 Identities=18% Similarity=0.197 Sum_probs=137.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++... ........+.+|+.+|..++||||+++++++...+ .+++||||+++++|.+++....
T Consensus 26 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 98 (331)
T cd06649 26 HKPSGLIMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EISICMEHMDGGSLDQVLKEAK 98 (331)
T ss_pred ECCCCcEEEEEEeecc---cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----EEEEEeecCCCCcHHHHHHHcC
Confidence 3567899999999753 22445678899999999999999999999987644 6899999999999999997653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
.+++..+..++.|++.||.|||+. .+|+|+||+|+|||++.++.++|+|||++.. ....+++.|+|||+
T Consensus 99 ----~~~~~~~~~~~~~i~~~l~~lH~~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~ 173 (331)
T cd06649 99 ----RIPEEILGKVSIAVLRGLAYLREK-HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 173 (331)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHhhc-CCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhH
Confidence 489999999999999999999982 2499999999999999999999999998864 34568999999997
Q ss_pred C--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
. ..++. +|++++|+.||......
T Consensus 174 ~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 174 LQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 3 22322 79999999999765443
No 82
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96 E-value=4.6e-28 Score=196.82 Aligned_cols=164 Identities=20% Similarity=0.251 Sum_probs=133.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ......+.+|+.+++.++||||+++++++.... .+++||||++ ++|.+++....
T Consensus 26 ~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~ 97 (288)
T cd07871 26 SKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKNLKHANIVTLHDIIHTER----CLTLVFEYLD-SDLKQYLDNCG 97 (288)
T ss_pred ECCCCCEEEEEEeccccc---CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC----eEEEEEeCCC-cCHHHHHHhcC
Confidence 356789999999975321 223346778999999999999999999987643 5899999997 59999887543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..++...+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 98 ---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aP 172 (288)
T cd07871 98 ---NLMSMHNVKIFMFQLLRGLSYCHK--RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 172 (288)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccCh
Confidence 347899999999999999999999 7799999999999999999999999998864 235678999999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+.. .++. +|+|++|..||.+....
T Consensus 173 E~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~ 210 (288)
T cd07871 173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK 210 (288)
T ss_pred HHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9632 2222 79999999999765543
No 83
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=9.9e-28 Score=198.07 Aligned_cols=166 Identities=16% Similarity=0.168 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCC-CcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH-PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~h-p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++..... ........+..|+.++..+.| ++|+.+++++...+ .+|+||||+++++|.+++...
T Consensus 21 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~~lv~E~~~~g~L~~~~~~~ 95 (324)
T cd05587 21 RKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD----RLYFVMEYVNGGDLMYHIQQV 95 (324)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC----EEEEEEcCCCCCcHHHHHHHc
Confidence 356788999999974321 112344567888999999866 45888888886643 599999999999999998764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 96 ----~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~a 169 (324)
T cd05587 96 ----GKFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIA 169 (324)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccC
Confidence 348999999999999999999999 7799999999999999999999999998753 23568999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+. .+++. +++|++|..||.+....
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~ 207 (324)
T cd05587 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 207 (324)
T ss_pred hhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 9972 22222 79999999999866543
No 84
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96 E-value=7.5e-28 Score=198.82 Aligned_cols=166 Identities=15% Similarity=0.173 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++...... .......+..|+.++..+. |++|+.+++++...+ .+|+||||+++++|.+++...
T Consensus 21 ~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~~lv~Ey~~~g~L~~~i~~~ 95 (323)
T cd05615 21 RKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD----RLYFVMEYVNGGDLMYHIQQV 95 (323)
T ss_pred ECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC----EEEEEEcCCCCCcHHHHHHHc
Confidence 4568999999999743111 1233456777888888885 577888988886644 589999999999999998764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 96 ----~~l~~~~~~~i~~qi~~al~~lH~--~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~a 169 (323)
T cd05615 96 ----GKFKEPQAVFYAAEISVGLFFLHR--RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIA 169 (323)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccC
Confidence 349999999999999999999999 7799999999999999999999999998764 23458999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+. .+++. ++++++|..||.+....
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~ 207 (323)
T cd05615 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 207 (323)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 9972 22222 79999999999876543
No 85
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=9.5e-28 Score=197.64 Aligned_cols=165 Identities=15% Similarity=0.167 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++...... .......+..|..++... +||+|+++++++...+ ++|+||||+++++|..++...
T Consensus 16 ~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~~lv~E~~~~g~L~~~i~~~ 90 (316)
T cd05620 16 LKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE----HLFFVMEFLNGGDLMFHIQDK 90 (316)
T ss_pred ECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC----EEEEEECCCCCCcHHHHHHHc
Confidence 4568899999999743111 122344566777777654 8999999999987643 699999999999999998764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (316)
T cd05620 91 ----GRFDLYRATFYAAEIVCGLQFLHS--KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIA 164 (316)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccC
Confidence 348999999999999999999999 7799999999999999999999999998763 34568999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+. ..++. +|+|++|..||.....
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~ 201 (316)
T cd05620 165 PEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE 201 (316)
T ss_pred HHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH
Confidence 9972 22222 7999999999976544
No 86
>KOG0033|consensus
Probab=99.96 E-value=4.8e-29 Score=191.19 Aligned_cols=169 Identities=16% Similarity=0.202 Sum_probs=139.1
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|+..||+.+|+|++...... ....+.+.+|+.|.+.++||||++|++.+... +..|||||++.|++|..=|-.+
T Consensus 31 ~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~ylvFe~m~G~dl~~eIV~R 104 (355)
T KOG0033|consen 31 VHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEE----SFHYLVFDLVTGGELFEDIVAR 104 (355)
T ss_pred HhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHHhcCCCcEeehhhhhccc----ceeEEEEecccchHHHHHHHHH
Confidence 46789999999999865333 33667899999999999999999998877553 4689999999999998877665
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec---CCcEEEeecCcccc-------ccCCCcccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH---NGLVKIGCDTYTHT-------IENKKYLSA 150 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~---~~~~ki~dfg~~~~-------~~~~~t~~y 150 (218)
..+++..+-.+++||+.+|.|+|+ ++|||||++|+|+|+.+ ..-+||+|||++.. .+..||++|
T Consensus 105 ----~~ySEa~aSH~~rQiLeal~yCH~--n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~f 178 (355)
T KOG0033|consen 105 ----EFYSEADASHCIQQILEALAYCHS--NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGY 178 (355)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcc
Confidence 338899999999999999999999 88999999999999953 36799999998865 567899999
Q ss_pred ccccc------CCCCch------hhhhhhCCCCCCcchhhhhH
Q psy238 151 TRQTY------GRPISG------QYEIVTKTNNVTEKKKEKEE 181 (218)
Q Consensus 151 ~aPE~------~~~~~~------~~ei~tg~~p~~~~~~ee~~ 181 (218)
||||+ +.+.+. +|-++.|..||++...+..-
T Consensus 179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly 221 (355)
T KOG0033|consen 179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 221 (355)
T ss_pred cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH
Confidence 99997 222222 78889999999985554443
No 87
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=4.8e-28 Score=201.60 Aligned_cols=166 Identities=19% Similarity=0.244 Sum_probs=137.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++...... .......+..|+.++..++||||+++++++.+.. ++|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 95 (350)
T cd05573 22 DKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQDEE----HLYLVMEYMPGGDLMNLLIRK- 95 (350)
T ss_pred ECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheecCC----eEEEEEcCCCCCCHHHHHHHc-
Confidence 3467999999999843211 1234567888999999999999999999887643 699999999999999999865
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..++.++.||+.||.|||+ .||+||||+|+|||++.++.++|+|||++..
T Consensus 96 ---~~l~~~~~~~i~~qi~~aL~~LH~--~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~ 170 (350)
T cd05573 96 ---DVFPEETARFYIAELVLALDSVHK--LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFR 170 (350)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccc
Confidence 348999999999999999999999 7799999999999999999999999998764
Q ss_pred -----------------ccCCCcccccccccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 142 -----------------IENKKYLSATRQTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 142 -----------------~~~~~t~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
....||+.|+|||+. ..++. +|+|++|..||......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 171 DNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 124589999999962 22222 79999999999876543
No 88
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95 E-value=1e-27 Score=196.00 Aligned_cols=163 Identities=20% Similarity=0.228 Sum_probs=132.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ......+.+|+.+++.++||||+.+++++.+.. .+|+||||+. ++|.+++....
T Consensus 26 ~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 97 (303)
T cd07869 26 SKVNGKLVALKVIRLQEE---EGTPFTAIREASLLKGLKHANIVLLHDIIHTKE----TLTLVFEYVH-TDLCQYMDKHP 97 (303)
T ss_pred ECCCCCEEEEEEeccccc---cccchhHHHHHHHHhhCCCCCcCeEEEEEecCC----eEEEEEECCC-cCHHHHHHhCC
Confidence 356889999999975321 222345678999999999999999999987643 6899999995 78888887543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..++...+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 98 ---~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (303)
T cd07869 98 ---GGLHPENVKLFLFQLLRGLSYIHQ--RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPP 172 (303)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCCh
Confidence 348899999999999999999999 7799999999999999999999999998754 235678999999
Q ss_pred ccC--C-CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYG--R-PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~--~-~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+. . .++. +++|++|..||.+...
T Consensus 173 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 209 (303)
T cd07869 173 DVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD 209 (303)
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 962 2 2222 7899999999986543
No 89
>KOG4721|consensus
Probab=99.95 E-value=8.7e-29 Score=208.40 Aligned_cols=149 Identities=23% Similarity=0.337 Sum_probs=128.7
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
.+++||||.+.- .-..+|.-|+.|.||||+.+.|+|.... -+|||||||+.|.|..+|....
T Consensus 146 ~netVAVKKV~e-----------lkETdIKHLRkLkH~NII~FkGVCtqsP----cyCIiMEfCa~GqL~~VLka~~--- 207 (904)
T KOG4721|consen 146 HNETVAVKKVRE-----------LKETDIKHLRKLKHPNIITFKGVCTQSP----CYCIIMEFCAQGQLYEVLKAGR--- 207 (904)
T ss_pred cCceehhHHHhh-----------hhhhhHHHHHhccCcceeeEeeeecCCc----eeEEeeeccccccHHHHHhccC---
Confidence 467899997752 1123577799999999999999998754 5899999999999999999764
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc--
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY-- 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~-- 155 (218)
.+.......|..+|+.|+.|||. +.|||||||.-||||..+..+||+|||.+.. ..+.||..|||||+
T Consensus 208 -~itp~llv~Wsk~IA~GM~YLH~--hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIr 284 (904)
T KOG4721|consen 208 -PITPSLLVDWSKGIAGGMNYLHL--HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIR 284 (904)
T ss_pred -ccCHHHHHHHHHHhhhhhHHHHH--hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhh
Confidence 48899999999999999999999 7799999999999999999999999998765 67899999999998
Q ss_pred CCCCch----------hhhhhhCCCCCCc
Q psy238 156 GRPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 156 ~~~~~~----------~~ei~tg~~p~~~ 174 (218)
..|++. ++||+||..||..
T Consensus 285 nePcsEKVDIwSfGVVLWEmLT~EiPYkd 313 (904)
T KOG4721|consen 285 NEPCSEKVDIWSFGVVLWEMLTGEIPYKD 313 (904)
T ss_pred cCCcccccceehhHHHHHHHHhcCCCccc
Confidence 334443 8999999999963
No 90
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.95 E-value=1.5e-27 Score=196.51 Aligned_cols=166 Identities=16% Similarity=0.202 Sum_probs=133.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhc-CCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~-l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++...... ..........|..++.. ++||||+++++++.+.. .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~ 90 (316)
T cd05619 16 LKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE----NLFFVMEYLNGGDLMFHIQSC 90 (316)
T ss_pred ECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC----EEEEEEeCCCCCcHHHHHHHc
Confidence 4567899999999843111 12233456667777775 48999999999987654 589999999999999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 91 ----~~~~~~~~~~~~~qi~~al~~LH~--~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a 164 (316)
T cd05619 91 ----HKFDLPRATFYAAEIICGLQFLHS--KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIA 164 (316)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccC
Confidence 348999999999999999999999 7799999999999999999999999998764 23468999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+. ..++. +|++++|..||.....+
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~ 202 (316)
T cd05619 165 PEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE 202 (316)
T ss_pred HHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH
Confidence 9972 22222 79999999999876543
No 91
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=1.2e-27 Score=198.14 Aligned_cols=166 Identities=13% Similarity=0.163 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ........+..|+.++..++||||+.+++++.+.+ ++|+||||+++++|.+++....
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~g~~L~~~l~~~~ 96 (331)
T cd05597 22 MKNTGQVYAMKILNKWEM-LKRAETACFREERDVLVNGDRRWITNLHYAFQDEN----NLYLVMDYYVGGDLLTLLSKFE 96 (331)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC----eEEEEEecCCCCcHHHHHHHhc
Confidence 356789999999974211 11334556788999999999999999999987644 6999999999999999997642
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
..+++..+..++.||+.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 97 ---~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~a 171 (331)
T cd05597 97 ---DRLPEDMARFYLAEMVLAIDSVHQ--LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYIS 171 (331)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccC
Confidence 348999999999999999999999 7799999999999999999999999998754 12358999999
Q ss_pred cccCC-------CCc----------hhhhhhhCCCCCCcchh
Q psy238 153 QTYGR-------PIS----------GQYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~-------~~~----------~~~ei~tg~~p~~~~~~ 177 (218)
||+.. .++ .+|+|++|..||.....
T Consensus 172 PE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 172 PEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred HHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 99732 111 17999999999976543
No 92
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=1.6e-27 Score=207.17 Aligned_cols=172 Identities=20% Similarity=0.243 Sum_probs=139.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC----CCCeEEEEEeccCCCCHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN----DKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~----~~~~~~lv~e~~~~~sL~~~l 77 (218)
+..+|..||||++..... .......+.+|+.++..+.|+||+.++..+..... ....+++||||+++|+|.+++
T Consensus 53 ~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l 130 (496)
T PTZ00283 53 RVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEI 130 (496)
T ss_pred EcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHH
Confidence 456899999999975422 24455678899999999999999999887754322 112478999999999999999
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCc
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKY 147 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t 147 (218)
.........+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||
T Consensus 131 ~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~--~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt 208 (496)
T PTZ00283 131 KSRAKTNRTFREHEAGLLFIQVLLAVHHVHS--KHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGT 208 (496)
T ss_pred HHhhccCCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCC
Confidence 8765445679999999999999999999999 7799999999999999999999999998754 235689
Q ss_pred ccccccccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 148 LSATRQTYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 148 ~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+.|+|||+.. .++. +|++++|..||.....
T Consensus 209 ~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~ 250 (496)
T PTZ00283 209 PYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM 250 (496)
T ss_pred cceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 9999999733 3332 7999999999976543
No 93
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95 E-value=2.7e-27 Score=191.29 Aligned_cols=167 Identities=16% Similarity=0.206 Sum_probs=134.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+....... ......+..|+.++..++||||+++++++.... ++|+||||++|++|.+++....
T Consensus 14 ~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~----~~~lv~e~~~g~~L~~~~~~~~ 88 (277)
T cd05607 14 VKNTGKMYACKKLDKKRLKK-KSGEKMALLEKEILEKVNSPFIVNLAYAFESKT----HLCLVMSLMNGGDLKYHIYNVG 88 (277)
T ss_pred EccCCcEEEEEEEcHHHhhc-chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC----eEEEEEecCCCCCHHHHHHhcc
Confidence 35679999999987432111 223345567999999999999999999887643 6899999999999999886543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....++..|+|||
T Consensus 89 ~--~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE 164 (277)
T cd05607 89 E--RGLEMERVIHYSAQITCGILHLHS--MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPE 164 (277)
T ss_pred c--cCCCHHHHHHHHHHHHHHHHHHHH--CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHH
Confidence 2 348899999999999999999999 7799999999999999999999999998764 2356889999999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+. ..++. +|++++|..||.....
T Consensus 165 ~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~ 199 (277)
T cd05607 165 ILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE 199 (277)
T ss_pred HHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc
Confidence 72 22222 7999999999976543
No 94
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95 E-value=1.7e-27 Score=196.61 Aligned_cols=167 Identities=15% Similarity=0.168 Sum_probs=133.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++..... ........+..|..++..+ +||+|+.+++++...+ .+|+||||+++++|.+++...
T Consensus 21 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~~lv~E~~~~g~L~~~~~~~ 95 (323)
T cd05616 21 RKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD----RLYFVMEYVNGGDLMYQIQQV 95 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC----EEEEEEcCCCCCCHHHHHHHc
Confidence 456788999999974321 1122344566777887777 6899999999887644 689999999999999998765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. .+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 96 ~----~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a 169 (323)
T cd05616 96 G----RFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIA 169 (323)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHH--CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcC
Confidence 3 48999999999999999999999 7799999999999999999999999998764 24568999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||+. .+++. +|++++|..||.+....+
T Consensus 170 PE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~ 208 (323)
T cd05616 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208 (323)
T ss_pred HHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH
Confidence 9962 22222 799999999998765443
No 95
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.95 E-value=1.4e-27 Score=193.47 Aligned_cols=164 Identities=16% Similarity=0.222 Sum_probs=132.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++.... ........+.+|+.++..++||||+++++++...+ .+|+||||++++++..+....
T Consensus 22 ~~~~~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~- 94 (287)
T cd07848 22 HKETKEIVAIKKFKDSE--ENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG----KLYLVFEYVEKNMLELLEEMP- 94 (287)
T ss_pred ECCCCcEEEEEEEeccc--ccccchhhHHHHHHHHHhCCCccccchhhhEecCC----EEEEEEecCCCCHHHHHHhcC-
Confidence 45678999999997542 22344567788999999999999999999986643 689999999876665444322
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+++.|+|
T Consensus 95 ---~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a 169 (287)
T cd07848 95 ---NGVPPEKVRSYIYQLIKAIHWCHK--NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRS 169 (287)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCC
Confidence 348999999999999999999999 7799999999999999999999999998864 12467899999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+. ..++. +|++++|+.||.....
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~ 206 (287)
T cd07848 170 PELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESE 206 (287)
T ss_pred cHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCH
Confidence 9962 22222 7999999999987554
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.95 E-value=1.6e-27 Score=196.39 Aligned_cols=166 Identities=16% Similarity=0.214 Sum_probs=134.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++...... .......+..|+.++..+ +||||+++++++.... .+|+||||+++++|..++...
T Consensus 16 ~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~ 90 (318)
T cd05570 16 LKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD----RLFFVMEYVNGGDLMFHIQRS 90 (318)
T ss_pred ECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EEEEEEcCCCCCCHHHHHHHc
Confidence 3567889999999843211 123445667888888877 7999999999987644 699999999999999988765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. .+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+++.|+|
T Consensus 91 ~----~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~a 164 (318)
T cd05570 91 G----RFDEPRARFYAAEIVLGLQFLHE--RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIA 164 (318)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHh--CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccC
Confidence 3 49999999999999999999999 7799999999999999999999999998753 23468999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+. ..++. ++++++|..||.....+
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~ 202 (318)
T cd05570 165 PEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED 202 (318)
T ss_pred HHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH
Confidence 9972 22222 78999999999765543
No 97
>KOG0589|consensus
Probab=99.95 E-value=5.9e-28 Score=200.95 Aligned_cols=168 Identities=22% Similarity=0.347 Sum_probs=144.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
++.++..||+|.+.... .+......+++|+.+++++.|||||.+.+.|...+ ..+|+||+||+||+|.+.|....
T Consensus 25 hk~~~~~~vlK~I~l~~--~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~---~~l~Ivm~Y~eGg~l~~~i~~~k 99 (426)
T KOG0589|consen 25 HKSDDKLYVLKKINLEK--LTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG---QLLCIVMEYCEGGDLAQLIKEQK 99 (426)
T ss_pred hccCCceEEEEEEeccc--cCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC---ceEEEEEeecCCCCHHHHHHHHh
Confidence 45677899999998763 33455568899999999999999999999998755 35899999999999999999886
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
+ ..|++..++.|+.|++.|+.|||+ .+|+|||||+.||++..++.++|.|||++.. .+..||+.|++|
T Consensus 100 ~--~~f~E~~i~~~~~Q~~~av~ylH~--~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcP 175 (426)
T KOG0589|consen 100 G--VLFPEERILKWFVQILLAVNYLHE--NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCP 175 (426)
T ss_pred h--ccccHHHHHHHHHHHHHHHHHHHh--hhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCH
Confidence 4 569999999999999999999999 7899999999999999999999999999876 557899999999
Q ss_pred ccCC--CC----------chhhhhhhCCCCCCcchhh
Q psy238 154 TYGR--PI----------SGQYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~~--~~----------~~~~ei~tg~~p~~~~~~e 178 (218)
|+.. ++ +.+|||.+-+.+|.+..-.
T Consensus 176 Eil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~ 212 (426)
T KOG0589|consen 176 EILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS 212 (426)
T ss_pred HHhCCCCCCccCcchhhcchHHHHHhcccccCccchH
Confidence 9733 22 2279999999999866543
No 98
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=2.2e-27 Score=196.64 Aligned_cols=166 Identities=12% Similarity=0.136 Sum_probs=135.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ........+..|+.++..+.|++|+.+++++.+.+ .+|+||||++||+|.+++....
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~----~~~lv~Ey~~gg~L~~~l~~~~ 96 (331)
T cd05624 22 MKHTERIYAMKILNKWEM-LKRAETACFREERNVLVNGDCQWITTLHYAFQDEN----YLYLVMDYYVGGDLLTLLSKFE 96 (331)
T ss_pred ECCCCCEEEEEEEeHHHH-HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----EEEEEEeCCCCCcHHHHHHHhc
Confidence 356788999999874211 11234456788999999999999999999987644 6899999999999999998642
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 97 ---~~l~~~~~~~~~~qi~~~L~~lH~--~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~a 171 (331)
T cd05624 97 ---DRLPEDMARFYIAEMVLAIHSIHQ--LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYIS 171 (331)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCC
Confidence 348999999999999999999999 7799999999999999999999999998754 22468999999
Q ss_pred cccCC-------CCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYGR-------PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~-------~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+.. .++. +|+|++|..||.....
T Consensus 172 PE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 172 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred HHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 99632 1111 7999999999976543
No 99
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=5.9e-27 Score=194.29 Aligned_cols=164 Identities=17% Similarity=0.193 Sum_probs=136.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++... ........+.+|+.++..++||||++++++|.+.+ .+|+||||+++++|.+++...
T Consensus 26 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 97 (333)
T cd06650 26 HKPSGLIMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EISICMEHMDGGSLDQVLKKA- 97 (333)
T ss_pred ECCCCcEEEEEEeecc---cCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC----EEEEEEecCCCCcHHHHHHHc-
Confidence 3457889999988753 22345567899999999999999999999998754 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.|||+. .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+|||+
T Consensus 98 ---~~~~~~~~~~~~~~l~~~l~~lH~~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~ 173 (333)
T cd06650 98 ---GRIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 173 (333)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHH
Confidence 3488999999999999999999972 2599999999999999999999999998864 34568999999997
Q ss_pred CC--CCch----------hhhhhhCCCCCCcchh
Q psy238 156 GR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 156 ~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
.. .++. +|++++|+.||.....
T Consensus 174 ~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~ 207 (333)
T cd06650 174 LQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA 207 (333)
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcch
Confidence 32 2222 6899999999976544
No 100
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.95 E-value=1.5e-27 Score=197.49 Aligned_cols=165 Identities=15% Similarity=0.121 Sum_probs=131.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC---CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l---~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
+..+|..||||++....... .........|..++... .||+|+.+++++.... .+|+||||+++++|..++.
T Consensus 14 ~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~ 88 (330)
T cd05586 14 KKDTRRIYAMKVLSKKEIVA-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS----DLYLVTDYMSGGELFWHLQ 88 (330)
T ss_pred ECCCCCEEEEEEEeHHHHhh-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC----eEEEEEcCCCCChHHHHHH
Confidence 45789999999997432111 12233445566666554 6999999999987654 5899999999999999887
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
.. ..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||..|
T Consensus 89 ~~----~~~~~~~~~~~~~qil~al~~LH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y 162 (330)
T cd05586 89 KE----GRFSEDRAKFYIAELVLALEHLHK--YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEY 162 (330)
T ss_pred hc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccc
Confidence 64 348999999999999999999999 7799999999999999999999999998764 245689999
Q ss_pred cccccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 151 TRQTYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+|||+.. .++. +|+|++|..||.....
T Consensus 163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~ 202 (330)
T cd05586 163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT 202 (330)
T ss_pred cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH
Confidence 9999622 1222 7999999999976543
No 101
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=5.1e-27 Score=196.43 Aligned_cols=165 Identities=18% Similarity=0.155 Sum_probs=133.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..+|..||||++... .........+.+|+.++..++||||+++++++..... ....+|+||||+. ++|...+..
T Consensus 42 ~~~~~~~vavK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 118 (359)
T cd07876 42 DTVLGINVAVKKLSRP--FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHM 118 (359)
T ss_pred EcCCCceeEEEEeccc--ccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHhc
Confidence 4678999999998743 1223455677899999999999999999999865432 2235799999996 577777643
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
.++...+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+|..|+|
T Consensus 119 ------~~~~~~~~~~~~qi~~~L~~LH~--~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~a 190 (359)
T cd07876 119 ------ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRA 190 (359)
T ss_pred ------cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCC
Confidence 37889999999999999999999 7799999999999999999999999998864 33567899999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+. ..++. +|+|++|..||.+...
T Consensus 191 PE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~ 227 (359)
T cd07876 191 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH 227 (359)
T ss_pred chhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 9973 22222 7999999999986643
No 102
>KOG0667|consensus
Probab=99.95 E-value=2.1e-27 Score=202.73 Aligned_cols=165 Identities=22% Similarity=0.246 Sum_probs=138.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-C-----CcccceeeeeecCCCCCCeEEEEEeccCCCCHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-H-----PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h-----p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~ 75 (218)
|..||+.||||+++.. .......+.|+.+|..++ | -|||+++++|...+ |+|||+|.+. .+|.+
T Consensus 207 d~~T~e~VAIKIiKN~-----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~----HlciVfELL~-~NLYe 276 (586)
T KOG0667|consen 207 DHKTGEIVAIKIIKNK-----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN----HLCIVFELLS-TNLYE 276 (586)
T ss_pred ecCCCcEEEEEeeccC-----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc----ceeeeehhhh-hhHHH
Confidence 7789999999999732 667778889999999987 3 45999999997754 8999999995 79999
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC--CcEEEeecCcccc-----ccCCCcc
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN--GLVKIGCDTYTHT-----IENKKYL 148 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~--~~~ki~dfg~~~~-----~~~~~t~ 148 (218)
+|... .+.++++..++.++.||+.||.+||+ .+|||+||||+|||+.+. ..+||+|||.|.. .+...+.
T Consensus 277 llK~n--~f~Glsl~~ir~~~~Qil~~L~~L~~--l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSR 352 (586)
T KOG0667|consen 277 LLKNN--KFRGLSLPLVRKFAQQILTALLFLHE--LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSR 352 (586)
T ss_pred HHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeecc
Confidence 99987 44679999999999999999999999 669999999999999653 6899999999876 4556688
Q ss_pred ccccccc--CCCCch----------hhhhhhCCCCCCcchhhhh
Q psy238 149 SATRQTY--GRPISG----------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 149 ~y~aPE~--~~~~~~----------~~ei~tg~~p~~~~~~ee~ 180 (218)
.|.|||+ |.+++. +.||++|-.-|.+.++-.+
T Consensus 353 fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQ 396 (586)
T KOG0667|consen 353 FYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQ 396 (586)
T ss_pred ccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHH
Confidence 9999997 555555 6889999887876655443
No 103
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=7e-27 Score=193.67 Aligned_cols=165 Identities=13% Similarity=0.164 Sum_probs=134.1
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|++..... ........+..|+.++..++|++|+.+++++.+.. .+|+||||+++|+|.+++....
T Consensus 23 ~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~- 96 (332)
T cd05623 23 KNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDNQWITTLHYAFQDEN----NLYLVMDYYVGGDLLTLLSKFE- 96 (332)
T ss_pred CCCCCEEEEEEEeHHHH-HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----EEEEEEeccCCCcHHHHHHHhc-
Confidence 45678899999863211 11233445778999999999999999999987643 6899999999999999997643
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQ 153 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aP 153 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+||
T Consensus 97 --~~l~~~~~~~~~~qi~~al~~lH~--~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aP 172 (332)
T cd05623 97 --DRLPEDMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 172 (332)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCH
Confidence 348999999999999999999999 7799999999999999999999999998753 234689999999
Q ss_pred ccCC-------CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR-------PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~-------~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. +|+|++|+.||.....
T Consensus 173 E~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 173 EILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred HHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 9632 1111 7999999999976543
No 104
>KOG4236|consensus
Probab=99.95 E-value=1.2e-27 Score=200.12 Aligned_cols=162 Identities=22% Similarity=0.273 Sum_probs=132.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHH-HHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ-FLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~ 80 (218)
+..+|+.||||++..-... ......+.+|+.||+.++||+||.+-.-|+..+ ++++|||-+. |+... +|...
T Consensus 585 hRktGrdVAvKvIdKlrFp--~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e----rvFVVMEKl~-GDMLEMILSsE 657 (888)
T KOG4236|consen 585 HRKTGRDVAVKVIDKLRFP--TKQESQLRNEVAILQNLHHPGIVNLECMFETPE----RVFVVMEKLH-GDMLEMILSSE 657 (888)
T ss_pred ecccCceeeeeeeecccCC--CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc----eEEEEehhhc-chHHHHHHHhh
Confidence 5679999999999854322 345578899999999999999999988887755 6999999995 56554 45443
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC---CcEEEeecCcccc-------ccCCCcccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN---GLVKIGCDTYTHT-------IENKKYLSA 150 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~---~~~ki~dfg~~~~-------~~~~~t~~y 150 (218)
. +++++.....++.||+.||.|||. .+|+|+||||+|||+.+. .++||||||+++. .+..||+.|
T Consensus 658 k---gRL~er~TkFlvtQIL~ALr~LH~--knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAY 732 (888)
T KOG4236|consen 658 K---GRLPERITKFLVTQILVALRYLHF--KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAY 732 (888)
T ss_pred c---ccchHHHHHHHHHHHHHHHHHhhh--cceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccc
Confidence 3 569999999999999999999999 779999999999999654 6899999999987 678999999
Q ss_pred cccccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 151 TRQTYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 151 ~aPE~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
+|||+.. .+.. .|--++|.-||++.
T Consensus 733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred cCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 9999732 3333 45667899999754
No 105
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=1.8e-26 Score=188.68 Aligned_cols=165 Identities=21% Similarity=0.255 Sum_probs=129.8
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc--
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR-- 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-- 82 (218)
++..||+|++... ........+.+|+.++..++||||+++++++.+.. .+++||||+++++|.+++.....
T Consensus 45 ~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~ 117 (304)
T cd05096 45 RPLLVAVKILRPD---ANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDED----PLCMITEYMENGDLNQFLSSHHLDD 117 (304)
T ss_pred cceEEEEEEecCC---CCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCC----ceEEEEecCCCCcHHHHHHhccccc
Confidence 4557999998742 22445667889999999999999999999997654 48999999999999999875421
Q ss_pred -------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-------
Q psy238 83 -------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------- 142 (218)
Q Consensus 83 -------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------- 142 (218)
....+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~ 195 (304)
T cd05096 118 KEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS--LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR 195 (304)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHHHHHHHH--CCccccCcchhheEEcCCccEEECCCccceecccCceeE
Confidence 11236788899999999999999999 67999999999999999999999999988641
Q ss_pred ---cCCCcccccccccC--CCCch----------hhhhhh--CCCCCCcchhh
Q psy238 143 ---ENKKYLSATRQTYG--RPISG----------QYEIVT--KTNNVTEKKKE 178 (218)
Q Consensus 143 ---~~~~t~~y~aPE~~--~~~~~----------~~ei~t--g~~p~~~~~~e 178 (218)
...++..|+|||+. ..++. ++++++ +..||.+...+
T Consensus 196 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 248 (304)
T cd05096 196 IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE 248 (304)
T ss_pred ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH
Confidence 23346789999962 22222 677765 56777765443
No 106
>KOG4250|consensus
Probab=99.95 E-value=6.3e-28 Score=207.29 Aligned_cols=166 Identities=23% Similarity=0.217 Sum_probs=137.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
++.||+.||||.+.. .+.....+...+|+++|++++|||||+++++=..... ....-.+|||||+||||..++..
T Consensus 34 nketG~~vAvK~~~~---~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~ 110 (732)
T KOG4250|consen 34 NKETGRLVAVKTFNK---ESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNS 110 (732)
T ss_pred ccccccchhHHhhhh---hcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcC
Confidence 578999999999875 2345677888999999999999999999887544321 12345799999999999999987
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec--C--CcEEEeecCcccc-------ccCCCcc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH--N--GLVKIGCDTYTHT-------IENKKYL 148 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~--~--~~~ki~dfg~~~~-------~~~~~t~ 148 (218)
.. +...+|+..++.++..++.||.|||+ +||+||||||.||++.. + -.-||+|||.|+. .+..||.
T Consensus 111 PE-N~~GLpE~e~l~lL~d~~~al~~LrE--n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~ 187 (732)
T KOG4250|consen 111 PE-NAYGLPESEFLDLLSDLVSALRHLRE--NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTE 187 (732)
T ss_pred cc-cccCCCHHHHHHHHHHHHHHHHHHHH--cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCch
Confidence 54 44569999999999999999999999 77999999999999953 3 3678999999976 6789999
Q ss_pred cccccccCC--CCch-----------hhhhhhCCCCCC
Q psy238 149 SATRQTYGR--PISG-----------QYEIVTKTNNVT 173 (218)
Q Consensus 149 ~y~aPE~~~--~~~~-----------~~ei~tg~~p~~ 173 (218)
.|++||+.. .+++ +|+..||..||.
T Consensus 188 ~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 188 EYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred hhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 999999743 1211 899999999995
No 107
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=1.6e-26 Score=187.54 Aligned_cols=168 Identities=13% Similarity=0.127 Sum_probs=136.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... .......+.+|+.+++.++|++|+.+++++...+ .+|+||+|+++++|.+++....
T Consensus 21 ~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~ 95 (285)
T cd05632 21 VRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYETKD----ALCLVLTIMNGGDLKFHIYNMG 95 (285)
T ss_pred ECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC----EEEEEEEeccCccHHHHHHHhc
Confidence 4567899999998743211 1233455778999999999999999998886643 5899999999999998887543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.++|+|||++.. ....++..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~ql~~~l~~lH~--~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE 171 (285)
T cd05632 96 N--PGFEEERALFYAAEILCGLEDLHR--ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPE 171 (285)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChH
Confidence 2 359999999999999999999999 7799999999999999999999999998753 3356799999999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
+. ..++. ++++++|..||......
T Consensus 172 ~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~ 207 (285)
T cd05632 172 VLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK 207 (285)
T ss_pred HhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 72 22222 78999999999876543
No 108
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=5.7e-27 Score=198.34 Aligned_cols=153 Identities=21% Similarity=0.271 Sum_probs=127.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|+.||+|... ...+.+|+.+|+.++||||++++++|.... ..++||+++. ++|..++....
T Consensus 113 d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~lv~e~~~-~~L~~~l~~~~ 177 (391)
T PHA03212 113 DNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNK----FTCLILPRYK-TDLYCYLAAKR 177 (391)
T ss_pred ECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC----eeEEEEecCC-CCHHHHHHhcC
Confidence 56788999999653 124678999999999999999999987643 5899999994 79998887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
.+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 178 ----~l~~~~~~~i~~qi~~aL~ylH~--~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~a 251 (391)
T PHA03212 178 ----NIAICDILAIERSVLRAIQYLHE--NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNA 251 (391)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCC
Confidence 48999999999999999999999 7799999999999999999999999999853 23578999999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcc
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~ 175 (218)
||+. ..++. +|++++|..||.+.
T Consensus 252 PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~ 286 (391)
T PHA03212 252 PELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK 286 (391)
T ss_pred hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 9973 23333 68999999887543
No 109
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.95 E-value=7.5e-27 Score=211.10 Aligned_cols=168 Identities=20% Similarity=0.189 Sum_probs=136.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||||++... ..........+.+|+.++..++||||+++++++.+.+ ..|+||+|++|++|.+++....
T Consensus 23 d~~tg~~VAIK~I~~~-l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~----~lyLVMEY~eGGSL~~lL~s~~ 97 (932)
T PRK13184 23 DPVCSRRVALKKIRED-LSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD----PVYYTMPYIEGYTLKSLLKSVW 97 (932)
T ss_pred ECCCCcEEEEEEECcc-cccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC----EEEEEEEcCCCCCHHHHHHHhh
Confidence 4668999999998742 1223455678899999999999999999999987654 5899999999999999987532
Q ss_pred cc-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc------------
Q psy238 82 RN-------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------ 142 (218)
Q Consensus 82 ~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------ 142 (218)
.. ...++...++.++.||+.||.|||+ .||+||||||+|||++.++.++|+|||++...
T Consensus 98 ~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs--~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~ 175 (932)
T PRK13184 98 QKESLSKELAEKTSVGAFLSIFHKICATIEYVHS--KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDV 175 (932)
T ss_pred hccccchhhhcccCHHHHHHHHHHHHHHHHHHHH--CCccccCCchheEEEcCCCCEEEEecCcceeccccccccccccc
Confidence 11 1235667889999999999999999 77999999999999999999999999987542
Q ss_pred --------------cCCCcccccccccC--CCCch----------hhhhhhCCCCCCcch
Q psy238 143 --------------ENKKYLSATRQTYG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 143 --------------~~~~t~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
...||+.|+|||+. .+.+. +++|+||..||....
T Consensus 176 ~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~ 235 (932)
T PRK13184 176 DERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK 235 (932)
T ss_pred ccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence 13689999999973 23332 799999999997643
No 110
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95 E-value=4.2e-27 Score=202.01 Aligned_cols=166 Identities=17% Similarity=0.187 Sum_probs=130.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCC----CCCCeEEEEEeccCCCCHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH----NDKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~----~~~~~~~lv~e~~~~~sL~~~l 77 (218)
+..+|..||||.+... .....+|+.+|+.++||||+++++++.... .....+++||||++ ++|.+++
T Consensus 87 ~~~~~~~vAiK~i~~~--------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~ 157 (440)
T PTZ00036 87 CIDTSEKVAIKKVLQD--------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYM 157 (440)
T ss_pred ECCCCCEEEEEEEecC--------cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHH
Confidence 4568899999988632 112346999999999999999988775422 12235779999996 6888887
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-cEEEeecCcccc-------ccCCCccc
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-LVKIGCDTYTHT-------IENKKYLS 149 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~-------~~~~~t~~ 149 (218)
.........+++..++.++.||+.||.|||+ .+|+||||||+|||++.++ .++|+|||++.. ....+|+.
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~--~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~ 235 (440)
T PTZ00036 158 KHYARNNHALPLFLVKLYSYQLCRALAYIHS--KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRF 235 (440)
T ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcC
Confidence 7654444669999999999999999999999 7799999999999998664 799999999864 34567899
Q ss_pred ccccccC--C-CCch----------hhhhhhCCCCCCcchhh
Q psy238 150 ATRQTYG--R-PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 150 y~aPE~~--~-~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+|||+. . .++. +|+|++|..||.+....
T Consensus 236 y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 277 (440)
T PTZ00036 236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV 277 (440)
T ss_pred ccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 9999962 2 2332 79999999999876544
No 111
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.95 E-value=1.9e-26 Score=187.11 Aligned_cols=166 Identities=13% Similarity=0.141 Sum_probs=135.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|+.||||.+...... .......+.+|+.++..++|++|+.+++.+.+.+ .+|+||+|+++++|.+++....
T Consensus 21 ~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~g~~L~~~l~~~~ 95 (285)
T cd05630 21 VRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKD----ALCLVLTLMNGGDLKFHIYHMG 95 (285)
T ss_pred EcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC----EEEEEEEecCCCcHHHHHHHhc
Confidence 4568899999998743222 1233456778999999999999999999887643 6899999999999999986543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....|+..|+|||
T Consensus 96 ~--~~l~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE 171 (285)
T cd05630 96 E--AGFEEGRAVFYAAEICCGLEDLHQ--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 171 (285)
T ss_pred c--cCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChH
Confidence 2 358999999999999999999999 6799999999999999999999999998764 2346889999999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcch
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.. .++. ++++++|..||....
T Consensus 172 ~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~ 205 (285)
T cd05630 172 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205 (285)
T ss_pred HHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 732 2222 799999999998654
No 112
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=1.1e-26 Score=194.72 Aligned_cols=166 Identities=16% Similarity=0.130 Sum_probs=134.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCC--CCCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH--NDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~--~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..++..||||++... .........+.+|+.+++.++||||+.+++++.... .....+|+||||++ ++|..++..
T Consensus 45 ~~~~~~~vaiK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 121 (364)
T cd07875 45 DAILERNVAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM 121 (364)
T ss_pred ECCCCcEEEEEEeCcc--ccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh
Confidence 4567899999998742 222344567889999999999999999999876532 12346899999996 588887753
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
.++...+..++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....+|..|+|
T Consensus 122 ------~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~a 193 (364)
T cd07875 122 ------ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193 (364)
T ss_pred ------cCCHHHHHHHHHHHHHHHHHHhh--CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCC
Confidence 27889999999999999999999 7799999999999999999999999999865 34578999999
Q ss_pred ccc--CCCCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTY--GRPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~--~~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+ +..++. +|+|++|..||.+....
T Consensus 194 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 231 (364)
T cd07875 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231 (364)
T ss_pred HHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 997 223322 79999999999876543
No 113
>KOG0612|consensus
Probab=99.95 E-value=2.5e-28 Score=218.14 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=138.0
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
+.|+..||.|+++.-.+ ........|..|-.+|...+.+=|+.++..|.+.. ++||||+|++||+|..++..+.
T Consensus 97 k~t~~VYAMK~lnK~eM-lKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~----~LYlVMdY~pGGDlltLlSk~~- 170 (1317)
T KOG0612|consen 97 KSTEKVYAMKILNKWEM-LKRAETACFREERDIMVFGNSEWIVQLHYAFQDER----YLYLVMDYMPGGDLLTLLSKFD- 170 (1317)
T ss_pred eccccchhHHHhhHHHH-hhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc----ceEEEEecccCchHHHHHhhcC-
Confidence 56888999999874221 11344567888999999999999999999998865 6999999999999999999764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQ 153 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aP 153 (218)
++|+..++.|+..|+.||+.||+ .|+|||||||+|||+|..|+++|+|||.+-. ...+|||.|++|
T Consensus 171 ---~~pE~~ArFY~aEiVlAldslH~--mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISP 245 (1317)
T KOG0612|consen 171 ---RLPEDWARFYTAEIVLALDSLHS--MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISP 245 (1317)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHh--ccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCH
Confidence 59999999999999999999999 5699999999999999999999999997643 678999999999
Q ss_pred cc----CCC---------Cch----hhhhhhCCCCCCcchh
Q psy238 154 TY----GRP---------ISG----QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~----~~~---------~~~----~~ei~tg~~p~~~~~~ 177 (218)
|+ +.. |+. +|||+.|..||...+-
T Consensus 246 EvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl 286 (1317)
T KOG0612|consen 246 EVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL 286 (1317)
T ss_pred HHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH
Confidence 96 111 111 7999999999985543
No 114
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95 E-value=1.2e-26 Score=193.85 Aligned_cols=165 Identities=17% Similarity=0.149 Sum_probs=133.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..+|..||||.+... .........+.+|+.+++.++||||+++++++..... ....+|+||||++ ++|...+..
T Consensus 38 ~~~~~~~vaiK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 114 (355)
T cd07874 38 DAVLDRNVAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM 114 (355)
T ss_pred ecCCCceEEEEEeCCc--ccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh
Confidence 4568899999998743 2223455678889999999999999999998865331 2245799999996 578777753
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
.++...++.++.|++.||.|||+ +||+||||+|+|||++.++.++|+|||++.. ....+|..|+|
T Consensus 115 ------~l~~~~~~~~~~qi~~aL~~LH~--~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~a 186 (355)
T cd07874 115 ------ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186 (355)
T ss_pred ------cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccC
Confidence 38889999999999999999999 7799999999999999999999999999865 34578999999
Q ss_pred ccc--CCCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTY--GRPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~--~~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+ +..++. +++|++|..||.+...
T Consensus 187 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 223 (355)
T cd07874 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223 (355)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 997 222222 7999999999986543
No 115
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=2.4e-26 Score=190.02 Aligned_cols=167 Identities=16% Similarity=0.174 Sum_probs=135.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ........+.+|+.+++.++||||++++++|.... .+|+||||+++++|.+++....
T Consensus 21 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~ 94 (327)
T cd08227 21 YKPTGEYVTVRRINLEA--CTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN----ELWVVTSFMAYGSAKDLICTHF 94 (327)
T ss_pred ecccCcEEEEEEechhh--ccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC----EEEEEEeccCCCcHHHHHHhhc
Confidence 46789999999997532 22345567888999999999999999999997754 5899999999999999997653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------------ccCCC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------------IENKK 146 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------------~~~~~ 146 (218)
. ..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++++||+.... ....+
T Consensus 95 ~--~~l~~~~~~~i~~qi~~~L~~LH~--~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (327)
T cd08227 95 M--DGMSELAIAYILQGVLKALDYIHH--MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVK 170 (327)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccc
Confidence 2 348999999999999999999999 7799999999999999999999999875322 12345
Q ss_pred cccccccccCC----CCch----------hhhhhhCCCCCCcchhh
Q psy238 147 YLSATRQTYGR----PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 147 t~~y~aPE~~~----~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
+..|+|||+.. .++. ++++++|..||......
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 216 (327)
T cd08227 171 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 216 (327)
T ss_pred eecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence 67799999732 2222 68999999999765443
No 116
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95 E-value=1.2e-26 Score=195.26 Aligned_cols=165 Identities=20% Similarity=0.248 Sum_probs=130.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.++..||||.+... ........+.+|+.+++.+ +||||++++++|...+ .+++||||+++|+|.+++.....
T Consensus 66 ~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~~ 138 (374)
T cd05106 66 DNVLRVAVKMLKAS---AHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG----PVLVITEYCCYGDLLNFLRKKAE 138 (374)
T ss_pred cccceeEEEeccCC---CCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC----CeEEeHhhccCCcHHHHHHhhhh
Confidence 34568999999743 1233456788999999999 8999999999987654 58999999999999999865321
Q ss_pred ------------------------------------------------------------------cCCCCCHHHHHHHH
Q psy238 83 ------------------------------------------------------------------NVKKLPLSAWKRWC 96 (218)
Q Consensus 83 ------------------------------------------------------------------~~~~~~~~~~~~~~ 96 (218)
...++++..++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 218 (374)
T cd05106 139 TFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFS 218 (374)
T ss_pred hhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHH
Confidence 11247888999999
Q ss_pred HHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccccCC--CCch---
Q psy238 97 SQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQTYGR--PISG--- 161 (218)
Q Consensus 97 ~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE~~~--~~~~--- 161 (218)
.||+.||.|||+ ++|+||||+|+|||++.++.++|+|||++... ...++..|+|||+.. .++.
T Consensus 219 ~qi~~aL~yLH~--~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 296 (374)
T cd05106 219 SQVAQGMDFLAS--KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSD 296 (374)
T ss_pred HHHHHHHHHHHH--CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCcccc
Confidence 999999999999 77999999999999999999999999988641 123456799999632 2222
Q ss_pred -------hhhhhh-CCCCCCcchh
Q psy238 162 -------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 162 -------~~ei~t-g~~p~~~~~~ 177 (218)
++++++ |..||.....
T Consensus 297 vwSlGvil~ellt~G~~Pf~~~~~ 320 (374)
T cd05106 297 VWSYGILLWEIFSLGKSPYPGILV 320 (374)
T ss_pred HHHHHHHHHHHHhCCCCCCccccc
Confidence 688987 9999976543
No 117
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95 E-value=7.2e-27 Score=195.14 Aligned_cols=157 Identities=18% Similarity=0.191 Sum_probs=129.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++... ........+.+|+.++..++|+||+++++++...+ .+++||||+++++|....
T Consensus 95 ~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~---- 163 (353)
T PLN00034 95 HRPTGRLYALKVIYGN---HEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG----EIQVLLEFMDGGSLEGTH---- 163 (353)
T ss_pred ECCCCCEEEEEEEecC---CcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC----eEEEEEecCCCCcccccc----
Confidence 4567899999998642 22445667889999999999999999999987644 589999999999986532
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||..|+||
T Consensus 164 ----~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP 237 (353)
T PLN00034 164 ----IADEQFLADVARQILSGIAYLHR--RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSP 237 (353)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCc
Confidence 25677888999999999999999 7799999999999999999999999998864 245789999999
Q ss_pred ccCC------CC-----c------hhhhhhhCCCCCCcc
Q psy238 154 TYGR------PI-----S------GQYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~~------~~-----~------~~~ei~tg~~p~~~~ 175 (218)
|+.. .+ + .+|++++|+.||...
T Consensus 238 E~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 276 (353)
T PLN00034 238 ERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG 276 (353)
T ss_pred cccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 9631 11 1 179999999999743
No 118
>KOG0193|consensus
Probab=99.95 E-value=2.8e-27 Score=200.33 Aligned_cols=160 Identities=22% Similarity=0.271 Sum_probs=138.8
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
.+||||++...... +...+.|.+|+.++++-+|.||+-+.|+|..+. +.+|+.+|.|.+|..+++... ..
T Consensus 415 GdVAVK~Lnv~~pt--~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~-----~AIiTqwCeGsSLY~hlHv~e---tk 484 (678)
T KOG0193|consen 415 GDVAVKLLNVDDPT--PEQLQAFKNEVAVLKKTRHENILLFMGACMNPP-----LAIITQWCEGSSLYTHLHVQE---TK 484 (678)
T ss_pred cceEEEEEecCCCC--HHHHHHHHHHHHHHhhcchhhheeeehhhcCCc-----eeeeehhccCchhhhhccchh---hh
Confidence 37999999976433 568899999999999999999999999998765 599999999999999998765 35
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccccC
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTYG 156 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~~ 156 (218)
|.+.+.+.|+.|+++|+.|||. ++|||+|||..||++++++.|+|+|||++.. ....|..-|||||+.
T Consensus 485 fdm~~~idIAqQiaqGM~YLHA--K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvI 562 (678)
T KOG0193|consen 485 FDMNTTIDIAQQIAQGMDYLHA--KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVI 562 (678)
T ss_pred hhHHHHHHHHHHHHHhhhhhhh--hhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHH
Confidence 8899999999999999999999 7799999999999999999999999999876 446678899999983
Q ss_pred C-----CCch----------hhhhhhCCCCCCcchhh
Q psy238 157 R-----PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 157 ~-----~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
. +++. .|||++|..||.....+
T Consensus 563 Rmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d 599 (678)
T KOG0193|consen 563 RMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD 599 (678)
T ss_pred hhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh
Confidence 2 4444 79999999999844433
No 119
>KOG0577|consensus
Probab=99.94 E-value=7.2e-28 Score=203.64 Aligned_cols=143 Identities=22% Similarity=0.295 Sum_probs=127.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+.+.||||.++.++..+ ....+.++.|+..|.++.|||+|.+-|+|..... .|+|||||- ||-.+++.-+.
T Consensus 47 d~~n~evVAIKKMsySGKQs-~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~T----aWLVMEYCl-GSAsDlleVhk 120 (948)
T KOG0577|consen 47 DVRNSEVVAIKKMSYSGKQS-NEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHT----AWLVMEYCL-GSASDLLEVHK 120 (948)
T ss_pred ccCccceeeeeecccccccc-HHHHHHHHHHHHHHHhccCCCcccccceeeccch----HHHHHHHHh-ccHHHHHHHHh
Confidence 67788999999999876444 5566789999999999999999999999987553 799999995 79999888776
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~ 155 (218)
.++.+-.+..++.+.+.||.|||+ .+.||||||..|||+++.|.|+|+|||.+.. .+++||+.|||||+
T Consensus 121 ---KplqEvEIAAi~~gaL~gLaYLHS--~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEV 193 (948)
T KOG0577|consen 121 ---KPLQEVEIAAITHGALQGLAYLHS--HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEV 193 (948)
T ss_pred ---ccchHHHHHHHHHHHHHHHHHHHH--hhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhH
Confidence 468888899999999999999999 7799999999999999999999999998776 78999999999997
No 120
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.94 E-value=1.7e-26 Score=187.35 Aligned_cols=167 Identities=17% Similarity=0.237 Sum_probs=129.2
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC---CCCcccceeeeeecCC-CCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTH-NDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l---~hp~iv~l~~~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+|..||||.+...... ......+.+|+.+++.+ .||||+++++++.... .....+++||||++ ++|.+++...
T Consensus 26 ~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~ 102 (290)
T cd07862 26 GGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKV 102 (290)
T ss_pred CCeEEEEEEEecccCC--CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhC
Confidence 4678999998754221 12223445666666554 7999999999886432 22356899999996 6999998765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQ 153 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aP 153 (218)
.. ..+++..++.++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+|+.|+||
T Consensus 103 ~~--~~~~~~~~~~i~~qi~~aL~~lH~--~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP 178 (290)
T cd07862 103 PE--PGVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 178 (290)
T ss_pred CC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccCh
Confidence 32 348999999999999999999999 7799999999999999999999999998864 345678999999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+. ..++. +|++++|..||.+....
T Consensus 179 E~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~ 215 (290)
T cd07862 179 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 215 (290)
T ss_pred HHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH
Confidence 962 22221 79999999999876554
No 121
>KOG0194|consensus
Probab=99.94 E-value=7.8e-27 Score=197.42 Aligned_cols=162 Identities=23% Similarity=0.276 Sum_probs=137.1
Q ss_pred EEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCC
Q psy238 9 VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLP 88 (218)
Q Consensus 9 vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~ 88 (218)
||||....+ ..........+++|.++|+.++|||||++||++.+..+ +++|||+|+||+|.++|..... .++
T Consensus 189 VAvK~~k~~-~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P----l~ivmEl~~gGsL~~~L~k~~~---~v~ 260 (474)
T KOG0194|consen 189 VAVKTTKGS-SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP----LMLVMELCNGGSLDDYLKKNKK---SLP 260 (474)
T ss_pred eEEEeeccc-ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc----cEEEEEecCCCcHHHHHHhCCC---CCC
Confidence 899998842 23446778899999999999999999999999988765 8999999999999999998652 599
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCcccccccccCC--C
Q psy238 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATRQTYGR--P 158 (218)
Q Consensus 89 ~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~aPE~~~--~ 158 (218)
......++.+++.||+|||+ .++|||||-.+|+|++.++.+||+|||++... ...-...|+|||... .
T Consensus 261 ~~ek~~~~~~AA~Gl~YLh~--k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~ 338 (474)
T KOG0194|consen 261 TLEKLRFCYDAARGLEYLHS--KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGI 338 (474)
T ss_pred HHHHHHHHHHHHhHHHHHHH--CCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCc
Confidence 99999999999999999999 77999999999999999999999999998863 223458999999622 2
Q ss_pred Cch----------hhhhhh-CCCCCCcchhhhh
Q psy238 159 ISG----------QYEIVT-KTNNVTEKKKEKE 180 (218)
Q Consensus 159 ~~~----------~~ei~t-g~~p~~~~~~ee~ 180 (218)
++. ++||++ |..||.+....+.
T Consensus 339 ~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v 371 (474)
T KOG0194|consen 339 FSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV 371 (474)
T ss_pred cccccchhheeeeEEeeeccCCCCCCCCCHHHH
Confidence 222 688888 8889988776643
No 122
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.94 E-value=3e-26 Score=182.26 Aligned_cols=165 Identities=20% Similarity=0.280 Sum_probs=137.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... ......+.+|+.+++.++||||+++++++.... ..|+||||+++++|.+++....
T Consensus 21 ~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 94 (256)
T cd08529 21 RKADKRVYAMKQIDLSKMN--RREREEAIDEARVLAKLDSSYIIRYYESFLDKG----KLNIVMEYAENGDLHKLLKMQR 94 (256)
T ss_pred EcCCCcEEEEEEeehhhCC--HHHHHHHHHHHHHHHhcCCCCeehheeeeccCC----EEEEEEEeCCCCcHHHHHHHhc
Confidence 3467899999998754222 445667889999999999999999999987643 6899999999999999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ..++...++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....+++.|+||
T Consensus 95 ~--~~~~~~~~~~i~~~l~~al~~lH~--~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aP 170 (256)
T cd08529 95 G--RPLPEDQVWRFFIQILLGLAHLHS--KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSP 170 (256)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCH
Confidence 2 458999999999999999999999 7799999999999999999999999998764 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..||....
T Consensus 171 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 205 (256)
T cd08529 171 ELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN 205 (256)
T ss_pred HHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 9732 2222 789999999997665
No 123
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.94 E-value=1.8e-26 Score=194.04 Aligned_cols=168 Identities=17% Similarity=0.187 Sum_probs=135.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCC-CCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND-KPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|..+|..||||.+... .........+.+|+.++..++||||+++++++...... ...+|+||+|+. ++|..++...
T Consensus 21 ~~~~~~~vaiK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~ 97 (372)
T cd07853 21 DPRDGKRVALKKMPNV--FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSP 97 (372)
T ss_pred ECCCCCEEEEEecccc--ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcC
Confidence 4578999999988632 12233456788999999999999999999998765421 236899999995 6888887643
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSAT 151 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~ 151 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....++..|+
T Consensus 98 ----~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~ 171 (372)
T cd07853 98 ----QPLSSDHVKVFLYQILRGLKYLHS--AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYR 171 (372)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcC
Confidence 358999999999999999999999 7799999999999999999999999998864 2345688999
Q ss_pred ccccCC--C-Cch----------hhhhhhCCCCCCcchhh
Q psy238 152 RQTYGR--P-ISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 152 aPE~~~--~-~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|||+.. . ++. +++|++|+.||.+....
T Consensus 172 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 211 (372)
T cd07853 172 APEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI 211 (372)
T ss_pred CHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH
Confidence 999732 1 222 79999999999876543
No 124
>KOG0574|consensus
Probab=99.94 E-value=7.1e-28 Score=189.79 Aligned_cols=158 Identities=15% Similarity=0.195 Sum_probs=137.5
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
++.++|..||||.+.. ....+.+..||.||+++..|.+|++||.|.... .+|+|||||..||+.+.++.+
T Consensus 53 IH~EsG~v~AIK~VPV------~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s----DLWIVMEYCGAGSiSDI~R~R 122 (502)
T KOG0574|consen 53 IHRESGHVLAIKKVPV------DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS----DLWIVMEYCGAGSISDIMRAR 122 (502)
T ss_pred HHhccCcEEEEEecCc------cchHHHHHHHHHHHHHcCCchhhhhhhhhccCC----ceEeehhhcCCCcHHHHHHHh
Confidence 4678999999999985 356778999999999999999999999876544 399999999889999999886
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
+ .++.+..+-.+++..+.||.|||. ..-||||||..|||++-+|+.+|+|||.+.. .+..||+.|||
T Consensus 123 ~---K~L~E~EIs~iL~~TLKGL~YLH~--~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMA 197 (502)
T KOG0574|consen 123 R---KPLSEQEISAVLRDTLKGLQYLHD--LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMA 197 (502)
T ss_pred c---CCccHHHHHHHHHHHHhHHHHHHH--HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCccccc
Confidence 5 569999999999999999999999 4589999999999999999999999998765 77899999999
Q ss_pred cccCC--CC----------chhhhhhhCCCCCC
Q psy238 153 QTYGR--PI----------SGQYEIVTKTNNVT 173 (218)
Q Consensus 153 PE~~~--~~----------~~~~ei~tg~~p~~ 173 (218)
||+.. .+ -.+.||.-|+.||.
T Consensus 198 PEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYs 230 (502)
T KOG0574|consen 198 PEVIEEIGYDTKADIWSLGITAIEMAEGRPPYS 230 (502)
T ss_pred HHHHHHhccchhhhHhhhcchhhhhhcCCCCcc
Confidence 99722 11 12688888999986
No 125
>KOG0201|consensus
Probab=99.94 E-value=3.4e-28 Score=199.11 Aligned_cols=160 Identities=21% Similarity=0.228 Sum_probs=139.1
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+|..+++.||||++.... .......+++|+.+|..++++||..+|+.|.... .++++||||.||++.+.+...
T Consensus 33 ~d~~t~k~vAiKii~Le~---~~deIediqqei~~Ls~~~~~~it~yygsyl~g~----~LwiiMey~~gGsv~~lL~~~ 105 (467)
T KOG0201|consen 33 IDNKTKKVVAIKIIDLEE---AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT----KLWIIMEYCGGGSVLDLLKSG 105 (467)
T ss_pred eeccccceEEEEEechhh---cchhhHHHHHHHHHHHhcCcchHHhhhhheeecc----cHHHHHHHhcCcchhhhhccC
Confidence 478899999999999743 3445677899999999999999999999998754 599999999999999999865
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. .+++..+..++++++.||.|||+ .+.+|||||+.|||++.+|.++++|||.+.. .+..||+.|||
T Consensus 106 ~----~~~E~~i~~ilre~l~~l~ylH~--~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMA 179 (467)
T KOG0201|consen 106 N----ILDEFEIAVILREVLKGLDYLHS--EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMA 179 (467)
T ss_pred C----CCccceeeeehHHHHHHhhhhhh--cceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccc
Confidence 3 25788888899999999999999 7799999999999999999999999998765 67899999999
Q ss_pred ccc--CCCCch----------hhhhhhCCCCCC
Q psy238 153 QTY--GRPISG----------QYEIVTKTNNVT 173 (218)
Q Consensus 153 PE~--~~~~~~----------~~ei~tg~~p~~ 173 (218)
||+ +..++. ++||.+|.+|+.
T Consensus 180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s 212 (467)
T KOG0201|consen 180 PEVIKQSGYDTKADIWSLGITAIELAKGEPPHS 212 (467)
T ss_pred hhhhccccccchhhhhhhhHHHHHHhcCCCCCc
Confidence 998 333333 799999999996
No 126
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=2.2e-26 Score=209.00 Aligned_cols=171 Identities=15% Similarity=0.257 Sum_probs=137.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||+|++.... ........+..|+.+|..+.||||++++++|.... ...+||||||+++++|.++|....
T Consensus 34 dk~tg~~vAlKvIk~~~--l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--~~~lyIVMEY~~gGSL~~lL~k~~ 109 (1021)
T PTZ00266 34 HKRTQEFFCWKAISYRG--LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--NQKLYILMEFCDAGDLSRNIQKCY 109 (1021)
T ss_pred ECCCCeEEEEEEEeccc--cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC--CCEEEEEEeCCCCCcHHHHHHHHh
Confidence 45678899999997542 22445677889999999999999999999887643 246899999999999999998754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCcccCCCCCCcEEEecC-----------------CcEEEeecCcc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCS-----PPIIHGNLTCDTIFIQHN-----------------GLVKIGCDTYT 139 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-----~~iiH~dlkp~NiLl~~~-----------------~~~ki~dfg~~ 139 (218)
.....+++..++.|+.||+.||.|||+.+ .+|+|+||+|+||||+.+ +.++|+|||++
T Consensus 110 ~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlA 189 (1021)
T PTZ00266 110 KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLS 189 (1021)
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcc
Confidence 44456999999999999999999999832 349999999999999642 45899999988
Q ss_pred cc-------ccCCCcccccccccC--C--CCch----------hhhhhhCCCCCCcch
Q psy238 140 HT-------IENKKYLSATRQTYG--R--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 140 ~~-------~~~~~t~~y~aPE~~--~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
.. ....+|+.|+|||+. . .++. +|+|++|..||....
T Consensus 190 r~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 190 KNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 64 345789999999963 1 1222 799999999997543
No 127
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=4.4e-26 Score=185.25 Aligned_cols=164 Identities=17% Similarity=0.236 Sum_probs=136.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|+.||+|++..... ........+.+|+.+++.+.||||+++++++.+.. .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~- 95 (290)
T cd05580 22 HKGSGKYYALKILSKAKI-VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS----NLYLVMEYVPGGELFSHLRKS- 95 (290)
T ss_pred EcCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC----eEEEEEecCCCCCHHHHHHHc-
Confidence 345789999999874321 12344567889999999999999999999987643 589999999999999999765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
..++...+..++.|++.||.|||+ .+++|+||+|.|||++.++.++|+|||++.. ....+++.|+|||..
T Consensus 96 ---~~l~~~~~~~~~~qil~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~ 170 (290)
T cd05580 96 ---GRFPEPVARFYAAQVVLALEYLHS--LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEII 170 (290)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhh
Confidence 348999999999999999999999 7799999999999999999999999998875 345678899999963
Q ss_pred C--CCch----------hhhhhhCCCCCCcch
Q psy238 157 R--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 157 ~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
. ..+. ++++++|..||....
T Consensus 171 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 171 LSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 2211 699999999997655
No 128
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.94 E-value=5e-26 Score=182.70 Aligned_cols=163 Identities=18% Similarity=0.240 Sum_probs=132.0
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
..+..||+|.+... ........+.+|+.++..+.||||+++++++.... .+++||||+++++|.+++....
T Consensus 31 ~~~~~vaik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~-- 101 (266)
T cd05064 31 KRELPVAIHTLRAG---CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN----TMMIVTEYMSNGALDSFLRKHE-- 101 (266)
T ss_pred CceeeEEEEecCCC---CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC----CcEEEEEeCCCCcHHHHHHhCC--
Confidence 45678999998742 22344567889999999999999999999987543 5899999999999999997643
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQT 154 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE 154 (218)
..+++..++.++.|++.||.|||+ .+++||||+|+|||++.++.++++|||.+... ...++..|+|||
T Consensus 102 -~~l~~~~~~~~~~~i~~al~~lH~--~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 178 (266)
T cd05064 102 -GQLVAGQLMGMLPGLASGMKYLSE--MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPE 178 (266)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHH--CCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHH
Confidence 358999999999999999999999 77999999999999999999999999976541 233457899999
Q ss_pred c--CCCCch----------hhhhhh-CCCCCCcchhh
Q psy238 155 Y--GRPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 155 ~--~~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
+ +..++. ++++++ |..||......
T Consensus 179 ~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~ 215 (266)
T cd05064 179 AIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ 215 (266)
T ss_pred HHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence 6 223332 578664 99999876544
No 129
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94 E-value=3.1e-26 Score=192.92 Aligned_cols=165 Identities=21% Similarity=0.239 Sum_probs=130.6
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..++..||||++.... .......+.+|+.+|..+ +||||++++++|.+.+ ..++||||+++|+|.+++....
T Consensus 62 ~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~----~~~lv~E~~~~g~L~~~l~~~~ 134 (375)
T cd05104 62 SDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG----PTLVITEYCCYGDLLNFLRRKR 134 (375)
T ss_pred CccceeEEEEeccCCc---CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC----cceeeehhccCCcHHHHHHhcc
Confidence 3456789999987432 133456788999999999 8999999999987754 4899999999999999997532
Q ss_pred c-----------------------------------------------------------------------cCCCCCHH
Q psy238 82 R-----------------------------------------------------------------------NVKKLPLS 90 (218)
Q Consensus 82 ~-----------------------------------------------------------------------~~~~~~~~ 90 (218)
. ....+++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (375)
T cd05104 135 DSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTE 214 (375)
T ss_pred cccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHH
Confidence 1 01247888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccccC--CC
Q psy238 91 AWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQTYG--RP 158 (218)
Q Consensus 91 ~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE~~--~~ 158 (218)
.++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++... ...++..|+|||+. ..
T Consensus 215 ~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 292 (375)
T cd05104 215 DLLSFSYQVAKGMSFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV 292 (375)
T ss_pred HHHHHHHHHHHHHHHHHH--CCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCC
Confidence 899999999999999999 77999999999999999999999999988641 12334679999973 22
Q ss_pred Cch----------hhhhhh-CCCCCCcch
Q psy238 159 ISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 159 ~~~----------~~ei~t-g~~p~~~~~ 176 (218)
++. +++|++ |..||....
T Consensus 293 ~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 293 YTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 222 688887 888987653
No 130
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94 E-value=2.9e-26 Score=187.97 Aligned_cols=165 Identities=18% Similarity=0.238 Sum_probs=133.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..++..||+|.+..... ......+.+|+.+++.++||||+++++++...+ .+++||||++ ++|.+++....
T Consensus 27 ~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 98 (309)
T cd07872 27 SKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK----SLTLVFEYLD-KDLKQYMDDCG 98 (309)
T ss_pred ecCCCCeEEEEEeecccc---CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC----eEEEEEeCCC-CCHHHHHHhcC
Confidence 456788999999875322 222345678999999999999999999987644 5899999996 58988887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..++...+..++.|++.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 99 ---~~~~~~~~~~~~~qi~~aL~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 173 (309)
T cd07872 99 ---NIMSMHNVKIFLYQILRGLAYCHR--RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 173 (309)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCC
Confidence 348899999999999999999999 7799999999999999999999999998764 234568899999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchhhh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
|+.. .++. +++|++|..||.+....+
T Consensus 174 E~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 212 (309)
T cd07872 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212 (309)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 9632 2222 799999999998765443
No 131
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94 E-value=6.9e-26 Score=181.52 Aligned_cols=167 Identities=20% Similarity=0.246 Sum_probs=136.7
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||||.+...... .......+.+|+.+++.++||||+++++++.+.+ ..++||+|+++++|.+++.....
T Consensus 24 ~~~~~~~~iK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~~~ 98 (267)
T cd08228 24 LLDRKPVALKKVQIFEMM-DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN----ELNIVLELADAGDLSQMIKYFKK 98 (267)
T ss_pred eCCCCEEEEEEeeccccC-CHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC----eEEEEEEecCCCcHHHHHHHhhh
Confidence 457899999988743222 2455567889999999999999999999987643 58999999999999999876543
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
....++...++.++.|++.||.|||+ ++++|+||+|+|||++.++.++|+|||++.. ....++..|+|||
T Consensus 99 ~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE 176 (267)
T cd08228 99 QKRLIPERTVWKYFVQLCSAVEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 176 (267)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChh
Confidence 33458899999999999999999999 7799999999999999999999999998764 2356788999999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcch
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
.. ..++. ++++++|..||....
T Consensus 177 ~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~ 210 (267)
T cd08228 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred hhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence 73 22222 689999999996543
No 132
>KOG0604|consensus
Probab=99.94 E-value=1.2e-27 Score=188.02 Aligned_cols=159 Identities=14% Similarity=0.098 Sum_probs=133.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..||+.+|+|++.. ...+.+|+++--.. .|||||.++++|.....+...+.+|||+|+||.|.+.++.+
T Consensus 83 ~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~ 153 (400)
T KOG0604|consen 83 HKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDR 153 (400)
T ss_pred eccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHc
Confidence 467888888888752 13456777765554 79999999999988777777888999999999999999998
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEe---cCCcEEEeecCcccc-------ccCCCcccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ---HNGLVKIGCDTYTHT-------IENKKYLSA 150 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~---~~~~~ki~dfg~~~~-------~~~~~t~~y 150 (218)
+. ..+++..+-.++.||+.|+.|||+ .+|.||||||+|+|.. .|..+||+|||++.. .+.+-|+.|
T Consensus 154 g~--~afTErea~eI~~qI~~Av~~lH~--~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyY 229 (400)
T KOG0604|consen 154 GD--QAFTEREASEIMKQIGLAVRYLHS--MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYY 229 (400)
T ss_pred cc--ccchHHHHHHHHHHHHHHHHHHHh--cchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccc
Confidence 65 669999999999999999999999 5599999999999995 467899999999976 457789999
Q ss_pred cccccCC------------CCchhhhhhhCCCCCC
Q psy238 151 TRQTYGR------------PISGQYEIVTKTNNVT 173 (218)
Q Consensus 151 ~aPE~~~------------~~~~~~ei~tg~~p~~ 173 (218)
.|||+.. ....+|-+++|-.||.
T Consensus 230 vaPevlg~eKydkscdmwSlgVimYIlLCGyPPFY 264 (400)
T KOG0604|consen 230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264 (400)
T ss_pred cCHHHhCchhcCCCCCccchhHHHHHhhcCCCccc
Confidence 9999722 1122788999999996
No 133
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.94 E-value=2.7e-26 Score=188.59 Aligned_cols=163 Identities=17% Similarity=0.220 Sum_probs=128.3
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|.+.... ....+.+|+.+|+.++||||+++++++.... ...+|+||+|+. ++|.+++.....
T Consensus 25 ~~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~ 95 (317)
T cd07868 25 GKDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHA--DRKVWLLFDYAE-HDLWHIIKFHRA 95 (317)
T ss_pred CCCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCC--CcEEEEEEeccC-CCHHHHHHhccc
Confidence 3567899999886421 1234678999999999999999999886533 346899999995 699988764321
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEE----ecCCcEEEeecCcccc-----------c
Q psy238 83 -----NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI----QHNGLVKIGCDTYTHT-----------I 142 (218)
Q Consensus 83 -----~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl----~~~~~~ki~dfg~~~~-----------~ 142 (218)
....+++..++.++.||+.||.|||+ .+|+||||+|+|||+ +.++.++|+|||++.. .
T Consensus 96 ~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 173 (317)
T cd07868 96 SKANKKPVQLPRGMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 173 (317)
T ss_pred ccccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccC
Confidence 11248999999999999999999999 779999999999999 4558999999998854 2
Q ss_pred cCCCcccccccccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 143 ENKKYLSATRQTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 143 ~~~~t~~y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
...+|+.|+|||+.. .++. ++++++|..||....
T Consensus 174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 356789999999622 1222 689999999997543
No 134
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94 E-value=6.9e-26 Score=181.01 Aligned_cols=164 Identities=23% Similarity=0.287 Sum_probs=134.4
Q ss_pred CCCCCcEEEEEEeecccccc-cHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKN-FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~-~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|.+....... .......+.+|+.+++.++||||+++++++.... .+++||||+++++|.+++...
T Consensus 23 ~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~~~~l~~~~~~~ 98 (263)
T cd06625 23 DVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE----TLSIFMEYMPGGSVKDQLKAY 98 (263)
T ss_pred EcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----eEEEEEEECCCCcHHHHHHHh
Confidence 45688999999987542221 1233467888999999999999999999987654 699999999999999998765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~ 149 (218)
..++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..
T Consensus 99 ----~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~ 172 (263)
T cd06625 99 ----GALTETVTRKYTRQILEGVEYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPY 172 (263)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCcc
Confidence 348899999999999999999999 6699999999999999999999999998764 12346788
Q ss_pred ccccccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 150 ATRQTYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 150 y~aPE~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+|||+.. ..+. ++++++|..||...
T Consensus 173 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 210 (263)
T cd06625 173 WMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF 210 (263)
T ss_pred ccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence 99999732 2212 68999999999754
No 135
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.94 E-value=3.5e-26 Score=190.12 Aligned_cols=165 Identities=16% Similarity=0.150 Sum_probs=132.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..+|..||||.+... .........+.+|+.+|+.++||||+++++++..... ....+|++++++ +++|.+++..
T Consensus 36 ~~~~~~~vavK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~ 112 (343)
T cd07878 36 DTRLRQKVAVKKLSRP--FQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC 112 (343)
T ss_pred ECCCCCEEEEEEeCch--hhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc
Confidence 4578899999998742 1122344567789999999999999999998864321 123578999998 7899988754
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQT 154 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE 154 (218)
..+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+|..|+|||
T Consensus 113 -----~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE 185 (343)
T cd07878 113 -----QKLSDEHVQFLIYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPE 185 (343)
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCch
Confidence 349999999999999999999999 7799999999999999999999999999875 3456899999999
Q ss_pred cCC---CCch----------hhhhhhCCCCCCcch
Q psy238 155 YGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.. .++. +|+|++|..||.+..
T Consensus 186 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 220 (343)
T cd07878 186 IMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND 220 (343)
T ss_pred HhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence 732 1221 799999999997654
No 136
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94 E-value=9.1e-26 Score=185.07 Aligned_cols=163 Identities=17% Similarity=0.193 Sum_probs=134.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... ........+.+|++++..++||||+++++++...+ .+|+||||+++++|.+++...
T Consensus 22 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~ey~~~~~L~~~l~~~- 93 (308)
T cd06615 22 HRPSGLIMARKLIHLE---IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG----EISICMEHMDGGSLDQVLKKA- 93 (308)
T ss_pred EcCCCeEEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----EEEEEeeccCCCcHHHHHHhc-
Confidence 3567889999988742 22345567889999999999999999999987644 699999999999999999765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.|||+. .+++|+||+|+|||++.++.++|+|||++.. ....++..|+|||+
T Consensus 94 ---~~~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~ 169 (308)
T cd06615 94 ---GRIPENILGKISIAVLRGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 169 (308)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhh-CCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhH
Confidence 3489999999999999999999972 2599999999999999999999999998764 34567899999997
Q ss_pred C--CCCch----------hhhhhhCCCCCCcch
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
. ..++. ++++++|+.||....
T Consensus 170 ~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~ 202 (308)
T cd06615 170 LQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD 202 (308)
T ss_pred hcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc
Confidence 3 22222 689999999997543
No 137
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=1.2e-25 Score=179.26 Aligned_cols=169 Identities=21% Similarity=0.326 Sum_probs=139.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... .......+..|+.+++.++||||+++++++.... ...++++|||+++++|.+++....
T Consensus 21 ~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~~~~e~~~~~~L~~~l~~~~ 96 (265)
T cd08217 21 RKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS--NQTLYIVMEYCEGGDLAQLIQKCK 96 (265)
T ss_pred ecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC--CCEEEEEehhccCCCHHHHHHHHh
Confidence 457889999999875422 2455677889999999999999999999876532 346899999999999999998765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLH-----SCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYL 148 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH-----~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~ 148 (218)
.....+++..++.++.|++.||.||| + .+++|+||+|+||+++.++.++|+|||++.. ....++.
T Consensus 97 ~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~--~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 174 (265)
T cd08217 97 KERKYIEEEFIWRILTQLLLALYECHNRSDPG--NTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTP 174 (265)
T ss_pred hcccCCCHHHHHHHHHHHHHHHHHHhcCcccc--CcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCC
Confidence 44466999999999999999999999 7 6799999999999999999999999998775 2346788
Q ss_pred cccccccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 149 SATRQTYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 149 ~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
.|+|||+.. ..+. ++++++|..||....
T Consensus 175 ~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 175 YYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN 214 (265)
T ss_pred CccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence 999999732 2211 689999999998655
No 138
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=1.3e-25 Score=178.91 Aligned_cols=164 Identities=20% Similarity=0.316 Sum_probs=135.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... ......+.+..|+.+++.+.||||+++++++.+.. .+|+||+|+++++|.+++....
T Consensus 21 ~~~~~~~~~iK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~ 93 (255)
T cd08219 21 HVNSDQKYAMKEIRLP---KSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG----HLYIVMEYCDGGDLMQKIKLQR 93 (255)
T ss_pred EcCCCceEEEEEEEcC---cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC----EEEEEEeeCCCCcHHHHHHhcc
Confidence 4568899999998643 22345567888999999999999999999987643 6999999999999999987643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ..++...++.++.|++.||.|||+ ++|+|+||+|+||+++.++.++++|||.+.. ....++..|+||
T Consensus 94 ~--~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP 169 (255)
T cd08219 94 G--KLFPEDTILQWFVQMCLGVQHIHE--KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPP 169 (255)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCH
Confidence 2 458899999999999999999999 7799999999999999999999999998865 234578889999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. ..+. ++++++|..||....
T Consensus 170 E~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 204 (255)
T cd08219 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS 204 (255)
T ss_pred HHHccCCcCchhhhhhhchhheehhhccCCCCCCC
Confidence 9732 2221 688999999997644
No 139
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=1.3e-25 Score=178.48 Aligned_cols=164 Identities=17% Similarity=0.200 Sum_probs=131.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... ........+.+|+.+++.++||||+++++++.... .+++||||+++++|.+++....
T Consensus 16 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~ 88 (252)
T cd05084 16 LRADNTPVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIYIVMELVQGGDFLTFLRTEG 88 (252)
T ss_pred EecCCceEEEEecCcc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----CeEEEEeeccCCcHHHHHHhCC
Confidence 4568899999987632 22445567889999999999999999999987644 5899999999999999987532
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccccc----------CCCccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIE----------NKKYLSAT 151 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~----------~~~t~~y~ 151 (218)
..+++..++.++.|++.||.|||+ ++++|+||+|+|||++.++.++|+|||++.... ...+..|+
T Consensus 89 ---~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 163 (252)
T cd05084 89 ---PRLKVKELIQMVENAAAGMEYLES--KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWT 163 (252)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeec
Confidence 358899999999999999999999 779999999999999999999999999876411 12235699
Q ss_pred ccccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 152 RQTYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 152 aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
|||+.. ..+. +|++++ |..||.....
T Consensus 164 aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~ 202 (252)
T cd05084 164 APEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN 202 (252)
T ss_pred CchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH
Confidence 999732 2222 688887 8888876544
No 140
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=1.4e-25 Score=179.00 Aligned_cols=163 Identities=15% Similarity=0.214 Sum_probs=131.8
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|++... .........+..|+.++..+.||||+++++++... .+++||+|+++++|.+++...
T Consensus 19 ~~~~~~~aiK~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~-- 89 (257)
T cd05116 19 KKSEKTVAVKILKND--NNDPALKDELLREANVMQQLDNPYIVRMIGICEAE-----SWMLVMELAELGPLNKFLQKN-- 89 (257)
T ss_pred CCCceEEEEEEccCC--CCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CcEEEEecCCCCcHHHHHHhc--
Confidence 346788999998743 22345667889999999999999999999987542 378999999999999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLSAT 151 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~y~ 151 (218)
..+++..+..++.|++.||.|||+ ++|+|+||+|.|||++.++.++|+|||++... ...++..|+
T Consensus 90 --~~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~ 165 (257)
T cd05116 90 --KHVTEKNITELVHQVSMGMKYLEE--TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWY 165 (257)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCcccc
Confidence 348999999999999999999999 77999999999999999999999999987641 122347899
Q ss_pred ccccCC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 152 RQTYGR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 152 aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
|||+.. ..+. +|++++ |..||......
T Consensus 166 aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 205 (257)
T cd05116 166 APECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN 205 (257)
T ss_pred CHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999632 2221 799998 99999765443
No 141
>KOG1989|consensus
Probab=99.94 E-value=2.2e-26 Score=201.80 Aligned_cols=166 Identities=21% Similarity=0.305 Sum_probs=135.1
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeee-ecC-CCC-CCeEEEEEeccCCCCHHHHHHh
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYW-TDT-HND-KPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~-~~~-~~~-~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
..|..||+|++-. ........+.+||.+|+.| .|+|||.|++.. ... +.+ ...++|+||||.||+|-+++..
T Consensus 60 ~~~~~~AlKrm~~----~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~ 135 (738)
T KOG1989|consen 60 KGGKKYALKRMYV----NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNT 135 (738)
T ss_pred CCCceeeeeeeec----CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHH
Confidence 4458999999874 2467788899999999999 599999999943 222 222 3467899999999999999998
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------------c
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------------I 142 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------------~ 142 (218)
+.. ..|++..++.|+++++.|+.+||.+..+|||||||-+||||+.++..||||||-+.. .
T Consensus 136 Rlq--~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI 213 (738)
T KOG1989|consen 136 RLQ--TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEI 213 (738)
T ss_pred HHh--ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHH
Confidence 765 349999999999999999999999767899999999999999999999999998765 1
Q ss_pred cCCCccccccccc-----CCCCch----------hhhhhhCCCCCCcc
Q psy238 143 ENKKYLSATRQTY-----GRPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 143 ~~~~t~~y~aPE~-----~~~~~~----------~~ei~tg~~p~~~~ 175 (218)
...-|+.|.|||. +.+++. +|-+.-...||.+.
T Consensus 214 ~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 214 EKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES 261 (738)
T ss_pred HhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence 2244899999996 334444 57777788888654
No 142
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=8.1e-26 Score=181.05 Aligned_cols=163 Identities=21% Similarity=0.259 Sum_probs=132.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|.+... ......+.+|+.++..+.||||+++++++...+ .+++||||+++++|.+++.....
T Consensus 28 ~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~ 98 (263)
T cd05052 28 KKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYIITEFMTYGNLLDYLRECNR 98 (263)
T ss_pred ecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCC----CcEEEEEeCCCCcHHHHHHhCCC
Confidence 456889999988632 223456888999999999999999999987644 58999999999999999976432
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQ 153 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ....+..|+||
T Consensus 99 --~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aP 174 (263)
T cd05052 99 --QEVNAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 174 (263)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCH
Confidence 358999999999999999999999 77999999999999999999999999987651 12235679999
Q ss_pred ccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 154 TYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
|+. ...+. ++++++ |..||.+...+
T Consensus 175 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 175 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 962 23322 788998 99999765443
No 143
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=9.4e-26 Score=182.32 Aligned_cols=158 Identities=16% Similarity=0.169 Sum_probs=131.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|++... ........+.+|+.++..++||||+++++++.... ..++||||+++++|..+.
T Consensus 22 ~~~~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~l~~~~---- 90 (279)
T cd06619 22 HLLTRRILAVKVIPLD---ITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN----RISICTEFMDGGSLDVYR---- 90 (279)
T ss_pred EcCCCcEEEEEEEecC---CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC----EEEEEEecCCCCChHHhh----
Confidence 4578899999998742 22445567889999999999999999999987754 589999999999986542
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
.+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+|||+
T Consensus 91 ----~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~ 164 (279)
T cd06619 91 ----KIPEHVLGRIAVAVVKGLTYLWS--LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPER 164 (279)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHHH--CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCcee
Confidence 37888999999999999999999 7799999999999999999999999998864 34578899999997
Q ss_pred CC--CCch----------hhhhhhCCCCCCcch
Q psy238 156 GR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 156 ~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
.. .++. ++++++|..||....
T Consensus 165 ~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~ 197 (279)
T cd06619 165 ISGEQYGIHSDVWSLGISFMELALGRFPYPQIQ 197 (279)
T ss_pred ecCCCCCCcchHHHHHHHHHHHHhCCCCchhhc
Confidence 32 2221 699999999997543
No 144
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.94 E-value=9.5e-26 Score=180.71 Aligned_cols=168 Identities=20% Similarity=0.263 Sum_probs=137.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+...... .......+.+|+.++..+.||||+++++++...+ ..+++|+|+++++|.+++....
T Consensus 23 ~~~~~~~~~vK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~~ 97 (267)
T cd08229 23 CLLDGVPVALKKVQIFDLM-DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----ELNIVLELADAGDLSRMIKHFK 97 (267)
T ss_pred ecCCCceEEEEeeeehhhh-hHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC----eEEEEEEecCCCCHHHHHHHhh
Confidence 3568899999988743222 2344567889999999999999999999987644 5899999999999999987644
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.....+++..++.++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ap 175 (267)
T cd08229 98 KQKRLIPEKTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 175 (267)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCH
Confidence 334568999999999999999999999 7799999999999999999999999998754 234678899999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcch
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+. ...+. ++++++|..||....
T Consensus 176 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08229 176 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred HHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence 973 22222 689999999997543
No 145
>KOG0608|consensus
Probab=99.94 E-value=7.5e-27 Score=198.82 Aligned_cols=161 Identities=12% Similarity=0.159 Sum_probs=131.9
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
...||.|.+...+ .........+..|-.||..-.++=||+||..|.+.+ .+|+||+|++||++..+|...+.
T Consensus 654 ~~lYAmKTLrKaD-Vl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd----nLYFVMdYIPGGDmMSLLIrmgI--- 725 (1034)
T KOG0608|consen 654 RALYAMKTLRKAD-VLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD----NLYFVMDYIPGGDMMSLLIRMGI--- 725 (1034)
T ss_pred hhHHHHhhhHHHH-HHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC----ceEEEEeccCCccHHHHHHHhcc---
Confidence 3456666555322 222344556677889999999999999999998876 49999999999999999998754
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------------------
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------------------ 141 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------------------ 141 (218)
|++..++.|+..+..|+++.|. .|+|||||||+|||||.+|++||+|||+|+.
T Consensus 726 -FeE~LARFYIAEltcAiesVHk--mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~ 802 (1034)
T KOG0608|consen 726 -FEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPS 802 (1034)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHh--ccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCc
Confidence 9999999999999999999999 6699999999999999999999999998854
Q ss_pred --------------------------ccCCCcccccccccCC--------CCc----hhhhhhhCCCCCCcchh
Q psy238 142 --------------------------IENKKYLSATRQTYGR--------PIS----GQYEIVTKTNNVTEKKK 177 (218)
Q Consensus 142 --------------------------~~~~~t~~y~aPE~~~--------~~~----~~~ei~tg~~p~~~~~~ 177 (218)
...+||..|+|||+.. .|+ .+|||+.|+.||-....
T Consensus 803 ~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 803 PEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP 876 (1034)
T ss_pred hhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC
Confidence 2358999999999722 111 18999999999965443
No 146
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94 E-value=2e-25 Score=179.96 Aligned_cols=166 Identities=23% Similarity=0.267 Sum_probs=134.1
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
.++..||||.+... ........+.+|+.++..+.||||+++++++.... ..++||+|+++++|.+++.....
T Consensus 33 ~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~~ 105 (280)
T cd05049 33 NDKELVAVKTLKET---ASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD----PPIMVFEYMEHGDLNKFLRSHGPD 105 (280)
T ss_pred CCcceEEEEeeccc---CCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC----CeEEEEecCCCCCHHHHHHhcCCc
Confidence 45688999998742 22335678899999999999999999999987653 58999999999999999976421
Q ss_pred ---------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------cc
Q psy238 83 ---------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IE 143 (218)
Q Consensus 83 ---------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~ 143 (218)
....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ..
T Consensus 106 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 183 (280)
T cd05049 106 AAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS--QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGH 183 (280)
T ss_pred hhhhcccccccccccHHHHHHHHHHHHHHHHHHhh--CCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCC
Confidence 12347889999999999999999999 7799999999999999999999999998763 12
Q ss_pred CCCccccccccc--CCCCch----------hhhhhh-CCCCCCcchhh
Q psy238 144 NKKYLSATRQTY--GRPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 144 ~~~t~~y~aPE~--~~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
..+++.|+|||+ +..++. ++++++ |..||.....+
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~ 231 (280)
T cd05049 184 TMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE 231 (280)
T ss_pred CcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 234678999997 223332 688998 99999765543
No 147
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=8.8e-26 Score=184.18 Aligned_cols=160 Identities=19% Similarity=0.288 Sum_probs=133.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|.+.... ......+.+|+.+++.+.||||+++++.+.... +.|+||+|+++++|.+++...
T Consensus 41 ~~~~~~~v~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 111 (296)
T cd06654 41 DVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWVVMEYLAGGSLTDVVTET- 111 (296)
T ss_pred ECCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC----EEEEeecccCCCCHHHHHHhc-
Confidence 45688999999987432 223466888999999999999999999987643 689999999999999998642
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.++...+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 112 ----~~~~~~~~~i~~ql~~aL~~LH~--~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 185 (296)
T cd06654 112 ----CMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185 (296)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCH
Confidence 37889999999999999999999 7799999999999999999999999998764 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. ..+. ++++++|..||....
T Consensus 186 E~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred HHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 9732 2212 799999999997544
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.94 E-value=1.2e-25 Score=179.94 Aligned_cols=167 Identities=20% Similarity=0.273 Sum_probs=136.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+....... ......+.+|+.+++.+.|+||+.+++++...+ ..++||||+++++|.+++....
T Consensus 23 ~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 97 (267)
T cd08224 23 CLLDGRVVALKKVQIFEMMD-AKARQDCLKEIDLLKQLDHPNVIKYLASFIENN----ELNIVLELADAGDLSRMIKHFK 97 (267)
T ss_pred EcCCCCEEEEEEeecccccc-hhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----eEEEEEecCCCCCHHHHHHHhc
Confidence 34589999999987533222 344677889999999999999999999987653 5899999999999999997654
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.....++...++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~ap 175 (267)
T cd08224 98 KQKRLIPERTIWKYFVQLCSALEHMHS--KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 175 (267)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCH
Confidence 333558999999999999999999999 7799999999999999999999999998754 234678889999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcc
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~ 175 (218)
|.. ..++. ++++++|..||...
T Consensus 176 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 176 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred HHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 962 22221 68999999999644
No 149
>KOG1026|consensus
Probab=99.94 E-value=2.1e-26 Score=201.53 Aligned_cols=167 Identities=19% Similarity=0.244 Sum_probs=139.2
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc--
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR-- 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-- 82 (218)
+-..||||.++. .......+.|++|+++|..++|||||+|+|+|....+ +|||||||..|+|..||..+..
T Consensus 515 ~~~lVAVK~LKd---~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P----~~MvFEYm~~GDL~eFLra~sP~a 587 (774)
T KOG1026|consen 515 DEQLVAVKALKD---KAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP----LCMVFEYMDHGDLHEFLRARSPKA 587 (774)
T ss_pred cceehhHhhhcc---cccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe----eEEEEEecccccHHHHHHhhCCcc
Confidence 345699999984 3335578899999999999999999999999988765 8999999999999999987532
Q ss_pred ----c----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccC
Q psy238 83 ----N----VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IEN 144 (218)
Q Consensus 83 ----~----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~ 144 (218)
. ..+++..+.+.++.||+.|+.||.+ +.+|||||-++|+||+++..|||+|||+++. ...
T Consensus 588 ~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~--~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t 665 (774)
T KOG1026|consen 588 DKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS--HHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNT 665 (774)
T ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCc
Confidence 1 2237888999999999999999999 7799999999999999999999999999986 123
Q ss_pred CCccccccccc--CCCCch----------hhhhhh-CCCCCCcchhhhh
Q psy238 145 KKYLSATRQTY--GRPISG----------QYEIVT-KTNNVTEKKKEKE 180 (218)
Q Consensus 145 ~~t~~y~aPE~--~~~~~~----------~~ei~t-g~~p~~~~~~ee~ 180 (218)
.-...|||||- -..++. ++||+| |..||.+.+.+|.
T Consensus 666 ~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 666 LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 44689999994 223333 677765 8899998888775
No 150
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94 E-value=2.5e-25 Score=177.20 Aligned_cols=166 Identities=23% Similarity=0.372 Sum_probs=135.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ........+.+|+.+++.++|||++++++.+.... ..+|+||||+++++|.+++....
T Consensus 21 ~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~lv~e~~~~~~l~~~l~~~~ 95 (257)
T cd08223 21 HRTDGKQYVIKKLNLRN--ASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED---GLLYIVMGFCEGGDLYHKLKEQK 95 (257)
T ss_pred EcCCCcEEEEEEEehhh--cCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC---CEEEEEecccCCCcHHHHHHHhc
Confidence 45678899999987432 22344567888999999999999999998775322 35899999999999999998643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ..+++..++.++.|++.||.+||+ .+++|+||+|+||+++.++.++|+|||++.. ....+++.|+||
T Consensus 96 ~--~~l~~~~~~~~~~~l~~~l~~lH~--~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aP 171 (257)
T cd08223 96 G--KLLPENQVVEWFVQIAMALQYLHE--KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSP 171 (257)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccCh
Confidence 2 458999999999999999999999 7799999999999999999999999998764 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..||....
T Consensus 172 E~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 206 (257)
T cd08223 172 ELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD 206 (257)
T ss_pred hHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 9732 2222 699999999997654
No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.5e-25 Score=179.73 Aligned_cols=160 Identities=17% Similarity=0.173 Sum_probs=132.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... .......+.+|+.++..++||||+++++++...+ .+|+||||+++++|.+++...
T Consensus 30 ~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 100 (267)
T cd06645 30 NVNTGELAAIKVIKLE----PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD----KLWICMEFCGGGSLQDIYHVT- 100 (267)
T ss_pred EcCCCcEEEEEEEecC----chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC----EEEEEEeccCCCcHHHHHHhc-
Confidence 4567899999998743 1233456778999999999999999999987644 589999999999999998754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....|+..|+||
T Consensus 101 ---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 175 (267)
T cd06645 101 ---GPLSESQIAYVSRETLQGLYYLHS--KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAP 175 (267)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccCh
Confidence 348999999999999999999999 7799999999999999999999999998754 234678999999
Q ss_pred ccCC-----CCch----------hhhhhhCCCCCCcc
Q psy238 154 TYGR-----PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~~-----~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+.. .++. ++++++|..||...
T Consensus 176 E~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 176 EVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred hhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 9731 1221 68999999998644
No 152
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.94 E-value=2.1e-25 Score=178.79 Aligned_cols=166 Identities=23% Similarity=0.259 Sum_probs=134.6
Q ss_pred CCCCCcEEEEEEeecccc-cccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSER-KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~-~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||.+..... .........+.+|+.+++.+.||||+++++++.+.. ...+++||||+++++|.+++...
T Consensus 23 ~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~ 100 (265)
T cd06652 23 DADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM--ERTLSIFMEHMPGGSIKDQLKSY 100 (265)
T ss_pred EcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--CceEEEEEEecCCCcHHHHHHHc
Confidence 456899999998864321 122345568889999999999999999999886643 23588999999999999998765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~ 149 (218)
. .+++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++..
T Consensus 101 ~----~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~ 174 (265)
T cd06652 101 G----ALTENVTRKYTRQILEGVSYLHS--NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPY 174 (265)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCcc
Confidence 3 37889999999999999999999 6799999999999999999999999998753 23457889
Q ss_pred ccccccC--CCCch----------hhhhhhCCCCCCcc
Q psy238 150 ATRQTYG--RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 150 y~aPE~~--~~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+|||+. ..++. +|++++|..||...
T Consensus 175 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 175 WMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred ccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 9999973 22222 79999999999754
No 153
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94 E-value=2e-25 Score=177.78 Aligned_cols=165 Identities=23% Similarity=0.334 Sum_probs=136.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ........+.+|+.+++.++|+||+++++++.+.. .+++||||+++++|.+++....
T Consensus 21 ~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~L~~~~~~~~ 94 (256)
T cd08221 21 RTEDDSLVVWKEVNLTR--LSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN----TLLIEMEYANGGTLYDKIVRQK 94 (256)
T ss_pred EcCCCcEEEEEEEeecc--cchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC----eEEEEEEecCCCcHHHHHHhcc
Confidence 35678999999987542 22445567889999999999999999999997643 6899999999999999998653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ..++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....+++.|+||
T Consensus 95 ~--~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ap 170 (256)
T cd08221 95 G--QLFEEEMVLWYLFQIVSAVSYIHK--AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSP 170 (256)
T ss_pred c--cCCCHHHHHHHHHHHHHHHHHHHh--CCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCH
Confidence 2 458999999999999999999999 6699999999999999999999999998765 235678999999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..||....
T Consensus 171 e~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08221 171 ELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN 205 (256)
T ss_pred hhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC
Confidence 9732 2211 689999999997643
No 154
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.94 E-value=1.9e-25 Score=183.71 Aligned_cols=159 Identities=16% Similarity=0.246 Sum_probs=128.9
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.||+|++.. .........+..|+.+++.+.||||+++++++.... .++|++|+++|+|.+++.... ..+
T Consensus 38 ~vaiK~~~~---~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~-----~~~v~e~~~~g~l~~~l~~~~---~~~ 106 (316)
T cd05108 38 PVAIKELRE---ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHK---DNI 106 (316)
T ss_pred eEEEEeccc---cCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC-----ceeeeecCCCCCHHHHHHhcc---ccC
Confidence 489999863 222445667889999999999999999999987643 689999999999999998643 348
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccccCC
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQTYGR 157 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE~~~ 157 (218)
+...++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++... ....+..|+|||+..
T Consensus 107 ~~~~~~~~~~qi~~~L~~LH~--~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~ 184 (316)
T cd05108 107 GSQYLLNWCVQIAKGMNYLEE--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL 184 (316)
T ss_pred CHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhc
Confidence 889999999999999999999 77999999999999999999999999998741 122356799999732
Q ss_pred --CCch----------hhhhhh-CCCCCCcchhhh
Q psy238 158 --PISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 158 --~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
.++. +|++++ |..||.+...++
T Consensus 185 ~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~ 219 (316)
T cd05108 185 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 219 (316)
T ss_pred cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 2222 688887 999998755443
No 155
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=2.5e-25 Score=177.87 Aligned_cols=161 Identities=19% Similarity=0.272 Sum_probs=129.7
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..||+|++... ........+.+|+.+++.++||||+++++++... .+++||||+++++|.+++....
T Consensus 21 ~~~~vavk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~--- 89 (257)
T cd05115 21 KQIDVAIKVLKNE---NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE-----ALMLVMEMASGGPLNKFLSGKK--- 89 (257)
T ss_pred CceeEEEEEcccc---cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC-----CeEEEEEeCCCCCHHHHHHhCC---
Confidence 4557999998743 2244556788999999999999999999987542 4799999999999999987543
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLSATRQ 153 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+||
T Consensus 90 ~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 167 (257)
T cd05115 90 DEITVSNVVELMHQVSMGMKYLEG--KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAP 167 (257)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCH
Confidence 358999999999999999999999 77999999999999999999999999988641 12224689999
Q ss_pred ccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 154 TYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
|+. ..++. ++++++ |..||......
T Consensus 168 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 205 (257)
T cd05115 168 ECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP 205 (257)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence 962 22222 688886 99999766543
No 156
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94 E-value=2.6e-25 Score=179.34 Aligned_cols=166 Identities=16% Similarity=0.184 Sum_probs=130.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..||||.+... ........+.+|+.+++.++||||+++++++.... ..++||||+++++|.+++......
T Consensus 34 ~~~~~~aik~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~ 106 (277)
T cd05062 34 EPETRVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ----PTLVIMELMTRGDLKSYLRSLRPE 106 (277)
T ss_pred CceeEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CeEEEEecCCCCCHHHHHHHcCcc
Confidence 34678999988632 22344566889999999999999999999986543 589999999999999999764321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCc
Q psy238 84 ------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKY 147 (218)
Q Consensus 84 ------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t 147 (218)
...+++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 184 (277)
T cd05062 107 MENNPVQAPPSLKKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 184 (277)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccC
Confidence 1235778899999999999999999 7799999999999999999999999998753 123446
Q ss_pred ccccccccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 148 LSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 148 ~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
..|+|||+. ..++. ++++++ |..||.+...+
T Consensus 185 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~ 228 (277)
T cd05062 185 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE 228 (277)
T ss_pred HhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 789999973 22222 688888 78898766543
No 157
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=2.1e-25 Score=180.96 Aligned_cols=168 Identities=19% Similarity=0.209 Sum_probs=137.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||+|.+... ........+.+|+++++.++||||++++++|.+.. ...+|+||||+++++|.+++....
T Consensus 22 ~~~~~~~~~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~ 96 (287)
T cd06621 22 LKNTGMIFALKTITTD---PNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES--SSSIGIAMEYCEGGSLDSIYKKVK 96 (287)
T ss_pred ECCCCeEEEEEEEecC---CchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC--CCeEEEEEEecCCCCHHHHHHHHH
Confidence 3457889999998743 22345677899999999999999999999886643 246899999999999999877544
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
.....++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|||.
T Consensus 97 ~~~~~l~~~~~~~i~~~i~~~L~~lH~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~ 174 (287)
T cd06621 97 KRGGRIGEKVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPER 174 (287)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHH
Confidence 334568999999999999999999999 7799999999999999999999999998764 23456889999996
Q ss_pred C--CCCch----------hhhhhhCCCCCCcch
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
. ..++. +|++++|..||....
T Consensus 175 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (287)
T cd06621 175 IQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEG 207 (287)
T ss_pred hcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence 2 22222 699999999998663
No 158
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.94 E-value=9.9e-26 Score=182.60 Aligned_cols=169 Identities=18% Similarity=0.254 Sum_probs=129.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhc---CCCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ---LEHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~---l~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l 77 (218)
+..+|..||+|.+...... ......+.+|+.++.. +.||||+++++++..... ....+++||++++ ++|.+++
T Consensus 21 ~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~ 97 (288)
T cd07863 21 DPHSGHFVALKSVRVQTNE--DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYL 97 (288)
T ss_pred ECCCCcEEEEEEeccCcCC--CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHH
Confidence 5678999999998753211 1112234456665554 479999999998865322 2356899999996 5999988
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccc
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSA 150 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y 150 (218)
..... ..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|
T Consensus 98 ~~~~~--~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y 173 (288)
T cd07863 98 DKVPP--PGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWY 173 (288)
T ss_pred HhcCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccc
Confidence 76532 348999999999999999999999 7799999999999999999999999998864 234578899
Q ss_pred cccccC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 151 TRQTYG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+|||+. ..++. +|++++|..||.....
T Consensus 174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~ 212 (288)
T cd07863 174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 212 (288)
T ss_pred cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH
Confidence 999963 22222 7899999999976544
No 159
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=1.2e-25 Score=183.55 Aligned_cols=161 Identities=20% Similarity=0.301 Sum_probs=134.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||||.+... .......+.+|+.+++.++||||+.+++++.... .+|+|+||+++++|..++...
T Consensus 40 ~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 110 (296)
T cd06655 40 DVATGQEVAIKQINLQ----KQPKKELIINEILVMKELKNPNIVNFLDSFLVGD----ELFVVMEYLAGGSLTDVVTET- 110 (296)
T ss_pred EcCCCcEEEEEEEecc----cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc----eEEEEEEecCCCcHHHHHHhc-
Confidence 5678999999998743 1233467889999999999999999999987643 689999999999999988642
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 111 ----~l~~~~~~~i~~~l~~al~~LH~--~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 184 (296)
T cd06655 111 ----CMDEAQIAAVCRECLQALEFLHA--NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184 (296)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCc
Confidence 38999999999999999999999 7799999999999999999999999998764 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|... .++. ++++++|..||.....
T Consensus 185 E~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~ 220 (296)
T cd06655 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (296)
T ss_pred chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9622 2222 6899999999976544
No 160
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94 E-value=2e-25 Score=185.46 Aligned_cols=165 Identities=17% Similarity=0.223 Sum_probs=131.2
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.+++.||+|++... ........+..|+.++..+ +||||++++++|...+ ..++++|+|+++++|.+++.....
T Consensus 35 ~~~~~va~K~~~~~---~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~---~~~~~v~ey~~~~~L~~~i~~~~~ 108 (337)
T cd05054 35 ASCRTVAVKMLKEG---ATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEYCKFGNLSNYLRSKRE 108 (337)
T ss_pred cccceeeeeeccCC---CCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC---CCEEEEEecCCCCCHHHHHHhccc
Confidence 46789999998742 1233446678899999999 8999999999886543 368999999999999999865321
Q ss_pred c---------------------------------------------------------CCCCCHHHHHHHHHHHHHHHHH
Q psy238 83 N---------------------------------------------------------VKKLPLSAWKRWCSQILSALSY 105 (218)
Q Consensus 83 ~---------------------------------------------------------~~~~~~~~~~~~~~qi~~~l~~ 105 (218)
. ..++++..+..++.||+.||.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~ 188 (337)
T cd05054 109 CFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEF 188 (337)
T ss_pred cccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 1 1258899999999999999999
Q ss_pred hhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccccccc--CCCCch----------hh
Q psy238 106 LHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTY--GRPISG----------QY 163 (218)
Q Consensus 106 lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~--~~~~~~----------~~ 163 (218)
||+ .+|+||||+|+|||++.++.++|+|||++.. ....++..|+|||+ +..++. ++
T Consensus 189 lH~--~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~ 266 (337)
T cd05054 189 LAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLW 266 (337)
T ss_pred HHh--CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHH
Confidence 999 7799999999999999999999999998864 12344678999996 233332 68
Q ss_pred hhhh-CCCCCCcch
Q psy238 164 EIVT-KTNNVTEKK 176 (218)
Q Consensus 164 ei~t-g~~p~~~~~ 176 (218)
++++ |..||.+..
T Consensus 267 el~t~g~~p~~~~~ 280 (337)
T cd05054 267 EIFSLGASPYPGVQ 280 (337)
T ss_pred HHHHcCCCCCCCCC
Confidence 8887 999997643
No 161
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94 E-value=2.2e-25 Score=179.01 Aligned_cols=164 Identities=18% Similarity=0.221 Sum_probs=127.9
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
....+|+|.+... ........+.+|+.+++.++||||+++++.+.... .+|+||||+++++|.+++......
T Consensus 21 ~~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~ 93 (269)
T cd05042 21 SKARVVVKELRAS---ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI----PYLLVLEFCPLGDLKNYLRSNRGMV 93 (269)
T ss_pred CCeEEEEeecCcc---CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC----ceEEEEEeCCCCcHHHHHHhccccc
Confidence 3456888877532 22444567888999999999999999999987654 589999999999999999875421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQ 153 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aP 153 (218)
...+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....++..|+||
T Consensus 94 ~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 171 (269)
T cd05042 94 AQMAQKDVLQRMACEVASGLLWLHQ--ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAP 171 (269)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHh--cCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCH
Confidence 1235678889999999999999999 7799999999999999999999999998754 122345679999
Q ss_pred ccCC---------CCch----------hhhhhh-CCCCCCcchh
Q psy238 154 TYGR---------PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 154 E~~~---------~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
|+.. ..+. ++++++ |..||.....
T Consensus 172 E~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (269)
T cd05042 172 ELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD 215 (269)
T ss_pred HHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence 9621 1111 688888 7888876543
No 162
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.94 E-value=1.7e-25 Score=180.64 Aligned_cols=161 Identities=20% Similarity=0.249 Sum_probs=134.6
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++... .......+..|+.+++.++||||+++++++.... .+|+||||+++++|.+++....
T Consensus 27 ~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~- 97 (280)
T cd06611 27 KETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN----KLWILIEFCDGGALDSIMLELE- 97 (280)
T ss_pred cCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC----eEEEEeeccCCCcHHHHHHHhc-
Confidence 357889999999742 3445577889999999999999999999987643 5899999999999999987643
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
..+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....+++.|+|||
T Consensus 98 --~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE 173 (280)
T cd06611 98 --RGLTEPQIRYVCRQMLEALNFLHS--HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPE 173 (280)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHH
Confidence 358999999999999999999999 7799999999999999999999999998754 2345788999999
Q ss_pred cCC-------CCch----------hhhhhhCCCCCCcch
Q psy238 155 YGR-------PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~-------~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.. +++. ++++++|..||....
T Consensus 174 ~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~ 212 (280)
T cd06611 174 VVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN 212 (280)
T ss_pred HHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC
Confidence 621 1211 689999999997654
No 163
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=3e-25 Score=180.14 Aligned_cols=164 Identities=23% Similarity=0.269 Sum_probs=132.2
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
.++..||+|.+.. ........+.+|+.++..+.||||+++++++...+ .+++||||+++++|.+++.....
T Consensus 33 ~~~~~~~ik~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~~ 104 (288)
T cd05093 33 QDKILVAVKTLKD----ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD----PLIMVFEYMKHGDLNKFLRAHGPD 104 (288)
T ss_pred CcceEEEEEecCC----cCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----ccEEEEEcCCCCCHHHHHHHcCCc
Confidence 4556799998863 22445667899999999999999999999987643 58999999999999999975431
Q ss_pred --------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccC
Q psy238 83 --------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IEN 144 (218)
Q Consensus 83 --------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~ 144 (218)
....+++..++.++.|++.||.|||+ .+++||||+|+|||++.++.++|+|||++.. ...
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 182 (288)
T cd05093 105 AVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS--QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 182 (288)
T ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCC
Confidence 12348999999999999999999999 7799999999999999999999999998863 122
Q ss_pred CCcccccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 145 KKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 145 ~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.+++.|+|||+. ..++. ++++++ |..||.....
T Consensus 183 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~ 228 (288)
T cd05093 183 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 228 (288)
T ss_pred CccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 336789999963 22222 689998 8999876554
No 164
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.94 E-value=1.9e-25 Score=189.44 Aligned_cols=163 Identities=16% Similarity=0.181 Sum_probs=129.7
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
++..||||++... ......+.+.+|+.+|..+. ||||+++++++...+ .+|+||||+++|+|.+++.....
T Consensus 66 ~~~~vavK~l~~~---~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~----~~~lv~Ey~~~g~L~~~l~~~~~~ 138 (400)
T cd05105 66 PVMKVAVKMLKPT---ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG----PIYIITEYCFYGDLVNYLHKNRDN 138 (400)
T ss_pred CceEEEEEecCCC---CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC----ceEEEEEecCCCcHHHHHHHhhhh
Confidence 3457999999743 22345567899999999995 999999999997644 58999999999999999875421
Q ss_pred --------------------------------------------------------------------------------
Q psy238 83 -------------------------------------------------------------------------------- 82 (218)
Q Consensus 83 -------------------------------------------------------------------------------- 82 (218)
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
T cd05105 139 FLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSN 218 (400)
T ss_pred hhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcc
Confidence
Q ss_pred -----------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------
Q psy238 83 -----------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------- 141 (218)
Q Consensus 83 -----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------- 141 (218)
....+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++..
T Consensus 219 ~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~ 296 (400)
T cd05105 219 DSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS--KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSK 296 (400)
T ss_pred hhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccccccc
Confidence 01247788889999999999999999 7799999999999999999999999998764
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcch
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
....++..|+|||+. ..++. +++|++ |..||....
T Consensus 297 ~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 297 GSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred CCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 123456789999963 22222 688886 999997653
No 165
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=3.5e-25 Score=176.68 Aligned_cols=164 Identities=21% Similarity=0.260 Sum_probs=135.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..+|+|.+.... ......+.+|+.+++.++||||+++++++.+.. .+|++|||+++++|.+++....
T Consensus 24 ~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~l~~e~~~~~~l~~~~~~~~ 95 (262)
T cd06613 24 DIATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD----KLWIVMEYCGGGSLQDIYQVTR 95 (262)
T ss_pred ecCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC----EEEEEEeCCCCCcHHHHHHhhc
Confidence 34577889999998532 235577889999999999999999999887643 6899999999999999987642
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 96 ---~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P 170 (262)
T cd06613 96 ---GPLSELQIAYVCRETLKGLAYLHE--TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAP 170 (262)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCc
Confidence 348999999999999999999999 7799999999999999999999999998764 234667889999
Q ss_pred ccCC-----CCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYGR-----PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~~-----~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+.. .++. +++|++|..||......
T Consensus 171 e~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~ 210 (262)
T cd06613 171 EVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM 210 (262)
T ss_pred hhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9732 2221 79999999999865543
No 166
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94 E-value=9.8e-26 Score=182.26 Aligned_cols=165 Identities=19% Similarity=0.259 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+..... .......+.+|+.++..+.||||+++++++.+.. .+|+||+|++ ++|.+++....
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~-~~l~~~~~~~~ 93 (285)
T cd07861 21 NKKTGQIVAMKKIRLESE--EEGVPSTAIREISLLKELQHPNIVCLQDVLMQES----RLYLIFEFLS-MDLKKYLDSLP 93 (285)
T ss_pred ECCCCcEEEEEEeccccc--cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC----eEEEEEecCC-CCHHHHHhcCC
Confidence 356789999999875321 1223456788999999999999999999987643 6899999996 68998887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ...+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 94 ~-~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 170 (285)
T cd07861 94 K-GQYMDAELVKSYLYQILQGILFCHS--RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAP 170 (285)
T ss_pred C-CCcCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccCh
Confidence 2 2458999999999999999999999 7799999999999999999999999998764 234568899999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. +++++||+.||.+..
T Consensus 171 E~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~ 206 (285)
T cd07861 171 EVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS 206 (285)
T ss_pred HHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 9632 2222 799999999997654
No 167
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.94 E-value=9.8e-26 Score=184.10 Aligned_cols=164 Identities=20% Similarity=0.248 Sum_probs=133.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... ......+.+|+.++..++||||+++++++.... .+++||||++ ++|.+++....
T Consensus 27 ~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~ 98 (301)
T cd07873 27 SKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK----SLTLVFEYLD-KDLKQYLDDCG 98 (301)
T ss_pred EcCCCcEEEEEEEecccc---cCchhHHHHHHHHHHhcCCCCcceEEEEEecCC----eEEEEEeccc-cCHHHHHHhcC
Confidence 456789999999875322 222345678999999999999999999987643 5899999996 69999887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+||
T Consensus 99 ---~~~~~~~~~~~~~qi~~aL~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~P 173 (301)
T cd07873 99 ---NSINMHNVKLFLFQLLRGLNYCHR--RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPP 173 (301)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCc
Confidence 348899999999999999999999 7799999999999999999999999998864 234568899999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+.. .++. +++|++|..||.....+
T Consensus 174 E~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~ 211 (301)
T cd07873 174 DILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE 211 (301)
T ss_pred HHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9632 1221 79999999999866543
No 168
>KOG2345|consensus
Probab=99.94 E-value=3.5e-26 Score=175.42 Aligned_cols=168 Identities=15% Similarity=0.169 Sum_probs=142.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..++..||+|.+... .....+..++|++..+.++|||+++++++...... +....|++++|...|||.+.+...
T Consensus 42 ~~s~~~~YAlKkI~c~----~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~ 117 (302)
T KOG2345|consen 42 GLSTGHLYALKKILCH----SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERL 117 (302)
T ss_pred ccCcccchhhheeecc----chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHH
Confidence 3568899999999853 35677889999999999999999999888765433 344689999999999999999998
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------------cc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------------IE 143 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------------~~ 143 (218)
...+..+++..++.|+.+|+.||.+||+...++.||||||.|||+++++.+.|.|||.++. ..
T Consensus 118 k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~ 197 (302)
T KOG2345|consen 118 KIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAE 197 (302)
T ss_pred hhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHH
Confidence 8777789999999999999999999999334499999999999999999999999998765 34
Q ss_pred CCCcccccccccCC-----CCch----------hhhhhhCCCCCC
Q psy238 144 NKKYLSATRQTYGR-----PISG----------QYEIVTKTNNVT 173 (218)
Q Consensus 144 ~~~t~~y~aPE~~~-----~~~~----------~~ei~tg~~p~~ 173 (218)
...|..|.|||+.. ..+. +|.|+-|..||+
T Consensus 198 e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe 242 (302)
T KOG2345|consen 198 ERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE 242 (302)
T ss_pred HhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence 67799999999732 2211 799999999996
No 169
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94 E-value=2.8e-25 Score=179.77 Aligned_cols=161 Identities=23% Similarity=0.328 Sum_probs=130.7
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||+|++... ........+.+|+.+++.++||||+++++++.... ...+++||||+++++|.+++...
T Consensus 31 ~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~--- 102 (283)
T cd05080 31 GTGEMVAVKTLKRE---CGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--GKGLQLIMEYVPLGSLRDYLPKH--- 102 (283)
T ss_pred CCCceEEEEEeccc---cChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--CceEEEEecCCCCCCHHHHHHHc---
Confidence 46789999998743 22345567888999999999999999999876532 23589999999999999999653
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCcccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLSATR 152 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~y~a 152 (218)
.+++..++.++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++... ...++..|+|
T Consensus 103 --~l~~~~~~~i~~~l~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (283)
T cd05080 103 --KLNLAQLLLFAQQICEGMAYLHS--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178 (283)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHH--CCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeC
Confidence 38999999999999999999999 77999999999999999999999999987641 1234566999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||... ..+. ++++++|..|+....
T Consensus 179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 214 (283)
T cd05080 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214 (283)
T ss_pred HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence 99632 1111 799999999986543
No 170
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94 E-value=3.5e-25 Score=178.97 Aligned_cols=166 Identities=19% Similarity=0.224 Sum_probs=133.2
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
++..||+|.+... ........+.+|+.++..++||||+++++++.... ..|++|||+++++|.+++......
T Consensus 34 ~~~~v~~K~~~~~---~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~L~~~l~~~~~~~ 106 (283)
T cd05048 34 SATSVAIKTLKEN---AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ----PTCMLFEYLAHGDLHEFLVRNSPHS 106 (283)
T ss_pred ceeeEEEEecccC---CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC----ceEEEEecCCCCcHHHHHHhcCCCc
Confidence 3467999988742 22445567889999999999999999999987644 489999999999999999764211
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------c
Q psy238 84 -----------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------I 142 (218)
Q Consensus 84 -----------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~ 142 (218)
...+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. .
T Consensus 107 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~ 184 (283)
T cd05048 107 DVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS--HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQS 184 (283)
T ss_pred ccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccccceEEEcCCCcEEECCCcceeeccccccccccC
Confidence 1347889999999999999999999 7799999999999999999999999998754 2
Q ss_pred cCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhhh
Q psy238 143 ENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 143 ~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
...+++.|+|||+. ..++. +|++++ |..||.+...++
T Consensus 185 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05048 185 KSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE 234 (283)
T ss_pred CCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 23456789999963 22222 688998 999998765543
No 171
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94 E-value=3.9e-25 Score=179.71 Aligned_cols=164 Identities=26% Similarity=0.279 Sum_probs=132.0
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
.++..||+|.+.. ........+.+|+.+++.++||||+++++++.... ..++||||+++++|.+++.....
T Consensus 33 ~~~~~~~~k~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~~ 104 (291)
T cd05094 33 KDKMLVAVKALKD----PTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD----PLIMVFEYMKHGDLNKFLRAHGPD 104 (291)
T ss_pred CcceeeEEEecCC----ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC----ceEEEEecCCCCcHHHHHHhcCcc
Confidence 4556788988763 33445567889999999999999999999987643 58999999999999999976431
Q ss_pred -----------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------
Q psy238 83 -----------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------- 141 (218)
Q Consensus 83 -----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------- 141 (218)
....+++..++.++.||+.||.|||+ ++|+|+||+|+|||++.++.++|+|||++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~ 182 (291)
T cd05094 105 AMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS--QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 182 (291)
T ss_pred cccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecC
Confidence 11347899999999999999999999 7799999999999999999999999998753
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
....++..|+|||+. ..++. +++++| |..||.....
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 183 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred CCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 223446789999962 22222 689998 9999876544
No 172
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.94 E-value=1.2e-25 Score=184.65 Aligned_cols=163 Identities=18% Similarity=0.225 Sum_probs=127.7
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|.+.... ....+.+|+.+++.++||||+++++++.... ...+++||+|+. ++|.+++.....
T Consensus 25 ~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~ 95 (317)
T cd07867 25 GKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHS--DRKVWLLFDYAE-HDLWHIIKFHRA 95 (317)
T ss_pred CCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccC--CCeEEEEEeeeC-CcHHHHHHhhhc
Confidence 3467889999886321 1235678999999999999999999886533 346899999995 688888764321
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEE----ecCCcEEEeecCcccc-----------c
Q psy238 83 -----NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI----QHNGLVKIGCDTYTHT-----------I 142 (218)
Q Consensus 83 -----~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl----~~~~~~ki~dfg~~~~-----------~ 142 (218)
....+++..++.++.|++.||.|||+ .+|+||||+|+|||+ +.++.++|+|||++.. .
T Consensus 96 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 173 (317)
T cd07867 96 SKANKKPMQLPRSMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 173 (317)
T ss_pred cccCCCCccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccC
Confidence 12348899999999999999999999 779999999999999 4568999999999864 2
Q ss_pred cCCCcccccccccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 143 ENKKYLSATRQTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 143 ~~~~t~~y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
...+|+.|+|||+.. .++. +++|+||..||....
T Consensus 174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 346688999999632 2222 699999999997544
No 173
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.7e-25 Score=179.31 Aligned_cols=160 Identities=18% Similarity=0.186 Sum_probs=131.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++.... ......+.+|+.++..+.||||+++++++.... .+++||||+++++|.+++...
T Consensus 30 ~~~~~~~~aik~~~~~~----~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~----~~~iv~e~~~~~~L~~~~~~~- 100 (267)
T cd06646 30 NLHTGELAAVKIIKLEP----GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE----KLWICMEYCGGGSLQDIYHVT- 100 (267)
T ss_pred ECCCCeEEEEEEEecCc----cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC----EEEEEEeCCCCCcHHHHHHhc-
Confidence 35678899999997431 223346788999999999999999999987643 589999999999999998754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 101 ---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P 175 (267)
T cd06646 101 ---GPLSELQIAYVCRETLQGLAYLHS--KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAP 175 (267)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCH
Confidence 348999999999999999999999 7799999999999999999999999998764 234577899999
Q ss_pred ccCC-----CCch----------hhhhhhCCCCCCcc
Q psy238 154 TYGR-----PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~~-----~~~~----------~~ei~tg~~p~~~~ 175 (218)
|... .++. ++++++|..||...
T Consensus 176 E~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 176 EVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred hHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9631 1111 78999999999644
No 174
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94 E-value=3.5e-25 Score=179.05 Aligned_cols=162 Identities=20% Similarity=0.231 Sum_probs=133.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..+|+|.+... .......+.+|+.+++.+.||||+++++++.... ..++||||+++++|..++....
T Consensus 26 ~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~~~v~e~~~~~~l~~~~~~~~ 97 (282)
T cd06643 26 NKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELE 97 (282)
T ss_pred ECCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC----EEEEEEEecCCCcHHHHHHhcC
Confidence 3457888999988632 2445567888999999999999999999987643 6899999999999998876532
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.++++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++..|+||
T Consensus 98 ---~~l~~~~~~~~~~qi~~~L~~LH~--~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (282)
T cd06643 98 ---RPLTEPQIRVVCKQTLEALNYLHE--NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 172 (282)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCH
Confidence 358999999999999999999999 7799999999999999999999999998754 234678999999
Q ss_pred ccCC-------CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR-------PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~-------~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..||....
T Consensus 173 E~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 212 (282)
T cd06643 173 EVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN 212 (282)
T ss_pred hhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence 9631 1111 689999999997654
No 175
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=1.7e-25 Score=182.62 Aligned_cols=159 Identities=20% Similarity=0.295 Sum_probs=132.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ......+.+|+.+++.++||||+++++++.... .+|+||+|+++++|.+++...
T Consensus 40 ~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 110 (297)
T cd06656 40 DIATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWVVMEYLAGGSLTDVVTET- 110 (297)
T ss_pred ECCCCCEEEEEEEecCc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----EEEEeecccCCCCHHHHHHhC-
Confidence 45789999999997432 233466788999999999999999999987643 689999999999999998652
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.+++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 111 ----~~~~~~~~~~~~~l~~~L~~LH~--~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 184 (297)
T cd06656 111 ----CMDEGQIAAVCRECLQALDFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184 (297)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCH
Confidence 37889999999999999999999 7799999999999999999999999998764 234678899999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcc
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~ 175 (218)
|.. ..++. ++++++|..||...
T Consensus 185 E~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~ 218 (297)
T cd06656 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (297)
T ss_pred HHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 972 22222 68999999999654
No 176
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=8.6e-26 Score=191.24 Aligned_cols=155 Identities=19% Similarity=0.242 Sum_probs=127.4
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|.+... ....+|+.+|..++||||+++++++.... .+|+||+++. ++|..++...
T Consensus 116 ~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~-- 179 (392)
T PHA03207 116 DEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKS----TVCMVMPKYK-CDLFTYVDRS-- 179 (392)
T ss_pred CccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCC----EEEEEehhcC-CCHHHHHHhc--
Confidence 345678999987632 13457999999999999999999887543 6899999995 7899988543
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATR 152 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~a 152 (218)
..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||+.|+|
T Consensus 180 --~~l~~~~~~~i~~ql~~aL~~LH~--~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~a 255 (392)
T PHA03207 180 --GPLPLEQAITIQRRLLEALAYLHG--RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNS 255 (392)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccC
Confidence 459999999999999999999999 7799999999999999999999999998754 23468999999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+.. .++. +|+|++|+.||.+...
T Consensus 256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 292 (392)
T PHA03207 256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQV 292 (392)
T ss_pred HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence 99732 2222 7999999999976543
No 177
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=1.2e-25 Score=180.02 Aligned_cols=166 Identities=28% Similarity=0.386 Sum_probs=132.5
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
...+..|+||++.. .........+.+|++++..++||||+++++++.... .+++||||+++|+|.+++.....
T Consensus 25 ~~~~~~V~vk~~~~---~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~----~~~lv~e~~~~g~L~~~L~~~~~ 97 (259)
T PF07714_consen 25 NDKNQPVAVKILKP---SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE----PLFLVMEYCPGGSLDDYLKSKNK 97 (259)
T ss_dssp TSSEEEEEEEEEST---TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS----SEEEEEE--TTEBHHHHHHHTCT
T ss_pred CCCCEEEEEEEecc---ccccccceeeeecccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence 45577899999963 233445788999999999999999999999998543 38999999999999999998722
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATR 152 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~a 152 (218)
..+++..++.|+.||+.||.|||+ .+++|++|+|+|||++.++.++|+|||++... .......|+|
T Consensus 98 --~~~~~~~~~~i~~~i~~~l~~Lh~--~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~a 173 (259)
T PF07714_consen 98 --EPLSEQQRLSIAIQIAEALSYLHS--NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLA 173 (259)
T ss_dssp --TTSBHHHHHHHHHHHHHHHHHHHH--TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-
T ss_pred --cccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 458999999999999999999999 77999999999999999999999999988652 2456788999
Q ss_pred cccC--CCCch----------hhhhhh-CCCCCCcchhhh
Q psy238 153 QTYG--RPISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
||+. ..++. ++||++ |..||.....++
T Consensus 174 PE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~ 213 (259)
T PF07714_consen 174 PEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE 213 (259)
T ss_dssp HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccc
Confidence 9973 22222 799999 789987765444
No 178
>KOG4645|consensus
Probab=99.93 E-value=1.4e-27 Score=215.87 Aligned_cols=165 Identities=20% Similarity=0.264 Sum_probs=138.4
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
++..||...|+|-+...... ......+.+|..++..++|||+|+++|+=.+.. .+++.||||.+|+|.+++...
T Consensus 1255 vN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe----kv~IFMEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1255 VNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE----KVYIFMEYCEGGSLASLLEHG 1328 (1509)
T ss_pred ecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHH----HHHHHHHHhccCcHHHHHHhc
Confidence 57889999999998865322 444566788999999999999999999977654 489999999999999999876
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCcc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKYL 148 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t~ 148 (218)
+. .++.....+..|++.|+.|||+ +|||||||||.||+++.+|.+|++|||.+.. ....||+
T Consensus 1329 ri----~dE~vt~vyt~qll~gla~LH~--~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~ 1402 (1509)
T KOG4645|consen 1329 RI----EDEMVTRVYTKQLLEGLAYLHE--HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTP 1402 (1509)
T ss_pred ch----hhhhHHHHHHHHHHHHHHHHHh--cCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCc
Confidence 43 7788888899999999999999 7799999999999999999999999998754 4568999
Q ss_pred cccccccCCCCc---------------hhhhhhhCCCCCCcchh
Q psy238 149 SATRQTYGRPIS---------------GQYEIVTKTNNVTEKKK 177 (218)
Q Consensus 149 ~y~aPE~~~~~~---------------~~~ei~tg~~p~~~~~~ 177 (218)
-|||||+..... ...||+||++||.....
T Consensus 1403 ~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1403 MYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred hhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence 999999722111 15899999999975443
No 179
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.93 E-value=2.8e-25 Score=178.00 Aligned_cols=165 Identities=18% Similarity=0.281 Sum_probs=133.9
Q ss_pred CCCCCcEEEEEEeeccccccc-----HHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNF-----KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQF 76 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~-----~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~ 76 (218)
+..+|..||+|.+........ ......+.+|+.+++.++||||+++++++.... ..++||||+++++|.++
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~ 96 (267)
T cd06628 21 NASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD----HLNIFLEYVPGGSVAAL 96 (267)
T ss_pred ecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC----ccEEEEEecCCCCHHHH
Confidence 456788999998875322211 123457888999999999999999999987644 58999999999999999
Q ss_pred HHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------------
Q psy238 77 LKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-------------- 142 (218)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-------------- 142 (218)
+... ..++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++...
T Consensus 97 l~~~----~~l~~~~~~~~~~~l~~~l~~lH~--~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 170 (267)
T cd06628 97 LNNY----GAFEETLVRNFVRQILKGLNYLHN--RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170 (267)
T ss_pred HHhc----cCccHHHHHHHHHHHHHHHHHHHh--cCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCcccccc
Confidence 9765 348899999999999999999999 67999999999999999999999999987642
Q ss_pred cCCCcccccccccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 143 ENKKYLSATRQTYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 143 ~~~~t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
...++..|+|||+.. .++. ++++++|..||....
T Consensus 171 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 216 (267)
T cd06628 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216 (267)
T ss_pred ccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence 134678899999732 2221 799999999997653
No 180
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=3.5e-25 Score=181.70 Aligned_cols=165 Identities=20% Similarity=0.249 Sum_probs=136.0
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||||++.... ........+..|+.+++.++||||+++++++.... .++++|+|+++++|.+++.....
T Consensus 22 ~~~~~~~avK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~l~~~~~ 95 (314)
T cd08216 22 KPTNTLVAVKKINLDS--CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS----ELYVVSPLMAYGSCEDLLKTHFP 95 (314)
T ss_pred cCCCCEEEEEEEeccc--cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC----eEEEEEeccCCCCHHHHHHHhcc
Confidence 4589999999997531 22445678999999999999999999999987654 58999999999999999987533
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------------ccCCCc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------------IENKKY 147 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------------~~~~~t 147 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||.+.. ....++
T Consensus 96 --~~~~~~~~~~~~~~l~~~L~~LH~--~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (314)
T cd08216 96 --EGLPELAIAFILKDVLNALDYIHS--KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN 171 (314)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence 348899999999999999999999 7799999999999999999999999997643 223567
Q ss_pred ccccccccCC----CCch----------hhhhhhCCCCCCcchh
Q psy238 148 LSATRQTYGR----PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 148 ~~y~aPE~~~----~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
..|+|||+.. .++. ++++++|..||.....
T Consensus 172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~ 215 (314)
T cd08216 172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA 215 (314)
T ss_pred ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 7899999732 1222 6899999999986543
No 181
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93 E-value=3.9e-25 Score=177.62 Aligned_cols=166 Identities=18% Similarity=0.220 Sum_probs=130.1
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
.++..+|+|.+... ........+.+|+.++..++||||+++++++.+.. .+++||||+++++|.+++.....
T Consensus 20 ~~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~ 92 (269)
T cd05087 20 YTPAQVVVKELRVS---ASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT----PYLLVMEFCPLGDLKGYLRSCRKA 92 (269)
T ss_pred CCceEEEEEecCCC---CChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC----CcEEEEECCCCCcHHHHHHHhhhc
Confidence 35567999988643 22334457888999999999999999999987644 48999999999999999976432
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATR 152 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~a 152 (218)
....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|
T Consensus 93 ~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~a 170 (269)
T cd05087 93 ELMTPDPTTLQRMACEIALGLLHLHK--NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIA 170 (269)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccC
Confidence 11246677888999999999999999 7799999999999999999999999998853 12345678999
Q ss_pred cccCCC---------Cch----------hhhhhh-CCCCCCcchhh
Q psy238 153 QTYGRP---------ISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~~~---------~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
||+... ++. ++++++ |..||.....+
T Consensus 171 PE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 216 (269)
T cd05087 171 PELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE 216 (269)
T ss_pred HhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH
Confidence 997321 111 688886 99999765443
No 182
>KOG4279|consensus
Probab=99.93 E-value=2e-26 Score=198.06 Aligned_cols=161 Identities=20% Similarity=0.266 Sum_probs=136.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..|...+|||.+.- ......+.+..||.+-+.++|.|||+++|.+... +++-+.||-++||||.++++..
T Consensus 596 D~~tqvrIaIKEIpe----kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen----Gf~kIFMEqVPGGSLSsLLrsk- 666 (1226)
T KOG4279|consen 596 DMDTQVRIAIKEIPE----KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN----GFFKIFMEQVPGGSLSSLLRSK- 666 (1226)
T ss_pred cccceeEEEeeeccc----ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC----CeEEEEeecCCCCcHHHHHHhc-
Confidence 677888999999873 2345667899999999999999999999998654 3688999999999999999874
Q ss_pred ccCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc--------ccCCCcccc
Q psy238 82 RNVKKL--PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 82 ~~~~~~--~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
++++ .+.++-.+..||+.||.|||+ +.|||||||-+|+||+- .|.+||+|||.+.. .+..||..|
T Consensus 667 --WGPlKDNEstm~fYtkQILeGLkYLHe--n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQY 742 (1226)
T KOG4279|consen 667 --WGPLKDNESTMNFYTKQILEGLKYLHE--NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQY 742 (1226)
T ss_pred --cCCCccchhHHHHHHHHHHHHhhhhhh--cceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhh
Confidence 4567 889999999999999999999 77999999999999974 59999999998865 678999999
Q ss_pred ccccc---CCC-C----------chhhhhhhCCCCCCcc
Q psy238 151 TRQTY---GRP-I----------SGQYEIVTKTNNVTEK 175 (218)
Q Consensus 151 ~aPE~---~~~-~----------~~~~ei~tg~~p~~~~ 175 (218)
||||+ |.. + +...||.||++||.+.
T Consensus 743 MAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El 781 (1226)
T KOG4279|consen 743 MAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL 781 (1226)
T ss_pred hChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence 99997 221 1 1168899999999754
No 183
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.93 E-value=3.5e-25 Score=176.99 Aligned_cols=161 Identities=21% Similarity=0.262 Sum_probs=130.3
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..||+|.+... ....+.+.+|+.+++.++||||+++++++.+.. ..++||||+++++|.+++.....
T Consensus 29 ~~~~v~iK~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~-- 97 (261)
T cd05072 29 NSTKVAVKTLKPG-----TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE----PIYIITEYMAKGSLLDFLKSDEG-- 97 (261)
T ss_pred CCceEEEEEccCC-----chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CcEEEEecCCCCcHHHHHHHhcC--
Confidence 4567999987632 223567889999999999999999998886643 58999999999999999976532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~ 155 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 175 (261)
T cd05072 98 GKVLLPKLIDFSAQIAEGMAYIER--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHH
Confidence 458889999999999999999999 77999999999999999999999999998651 2234567999996
Q ss_pred C--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 G--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
. ..++. +|+++| |..||.+...+
T Consensus 176 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 211 (261)
T cd05072 176 INFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS 211 (261)
T ss_pred hccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence 2 22222 688998 99999765443
No 184
>KOG0614|consensus
Probab=99.93 E-value=1.1e-27 Score=199.41 Aligned_cols=159 Identities=16% Similarity=0.185 Sum_probs=136.5
Q ss_pred EEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCC
Q psy238 9 VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLP 88 (218)
Q Consensus 9 vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~ 88 (218)
+|+|+++..+..+ ....+.+..|-.||..++.|.||++|..|.++. ++||+||-|-||.|+..++.++ .|+
T Consensus 448 fAlKilkK~hIVd-tkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k----yvYmLmEaClGGElWTiLrdRg----~Fd 518 (732)
T KOG0614|consen 448 FALKILKKKHIVD-TKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK----YVYMLMEACLGGELWTILRDRG----SFD 518 (732)
T ss_pred HHHHHHhHhhccc-hhHHHHHHhHHHHHHhcCchHHHHHHHHhccch----hhhhhHHhhcCchhhhhhhhcC----Ccc
Confidence 6777776544444 456678889999999999999999999998754 6999999999999999999874 499
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc----CC
Q psy238 89 LSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY----GR 157 (218)
Q Consensus 89 ~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~----~~ 157 (218)
..++..++..++.|++|||+ ++||+|||||+|.|++.+|.+||.|||++.. .+.+||+.|.|||+ |-
T Consensus 519 d~tarF~~acv~EAfeYLH~--k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGH 596 (732)
T KOG0614|consen 519 DYTARFYVACVLEAFEYLHR--KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGH 596 (732)
T ss_pred cchhhhhHHHHHHHHHHHHh--cCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCc
Confidence 99999999999999999999 7799999999999999999999999999865 67899999999996 22
Q ss_pred ----CCch----hhhhhhCCCCCCcchhh
Q psy238 158 ----PISG----QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 158 ----~~~~----~~ei~tg~~p~~~~~~e 178 (218)
.++. .||+++|.+||.+...=
T Consensus 597 D~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 597 DRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred chhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 2222 69999999999876543
No 185
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.93 E-value=3.6e-25 Score=179.09 Aligned_cols=163 Identities=23% Similarity=0.329 Sum_probs=130.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+... .......+.+|+.+++.+.||||+++++++...+ ...+++||||+++++|.+++....
T Consensus 29 ~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~ 102 (284)
T cd05081 29 QDNTGEVVAVKKLQHS----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--RRNLRLVMEYLPYGSLRDYLQKHR 102 (284)
T ss_pred cCCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC--CCceEEEEEecCCCCHHHHHHhcC
Confidence 5567899999998732 2445567889999999999999999999876532 235899999999999999997543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccccc-----------CCCcccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIE-----------NKKYLSA 150 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~-----------~~~t~~y 150 (218)
..+++..++.++.|++.||.|||+ +|++|+||+|+|||++.++.++|+|||++.... ..++..|
T Consensus 103 ---~~l~~~~~~~~~~~l~~aL~~LH~--~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y 177 (284)
T cd05081 103 ---ERLDHRKLLLYASQICKGMEYLGS--KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFW 177 (284)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEe
Confidence 348899999999999999999999 779999999999999999999999999887521 1223459
Q ss_pred cccccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 151 TRQTYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 151 ~aPE~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
+|||+.. .++. ++++++|..|+...
T Consensus 178 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 214 (284)
T cd05081 178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP 214 (284)
T ss_pred eCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCc
Confidence 9999732 2222 68888887776543
No 186
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.93 E-value=4.2e-25 Score=176.14 Aligned_cols=160 Identities=19% Similarity=0.304 Sum_probs=128.8
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..||+|.+.... .....+.+|+.+++.++||||+++++++.... .+++||||+++++|.+++....
T Consensus 27 ~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~iv~e~~~~~~L~~~~~~~~--- 94 (256)
T cd05114 27 AQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK----PLYIVTEFMENGCLLNYLRQRQ--- 94 (256)
T ss_pred cCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC----CEEEEEEcCCCCcHHHHHHhCc---
Confidence 34679999876321 12356788999999999999999999987644 5899999999999999987543
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~ 155 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+|||+
T Consensus 95 ~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~ 172 (256)
T cd05114 95 GKLSKDMLLSMCQDVCEGMEYLER--NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV 172 (256)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhh
Confidence 248899999999999999999999 7799999999999999999999999998764 12234567999997
Q ss_pred CC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 GR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.. .++. ++++++ |..||......
T Consensus 173 ~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~ 208 (256)
T cd05114 173 FNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY 208 (256)
T ss_pred cccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 32 2222 688888 89999766543
No 187
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=4.6e-25 Score=176.78 Aligned_cols=166 Identities=23% Similarity=0.301 Sum_probs=135.0
Q ss_pred CCCCCcEEEEEEeecccc-cccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSER-KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~-~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|..+|..||+|.+..... .........+.+|+.+++.++||||+++++++.+.. ...+++||||+++++|.+++...
T Consensus 23 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~ 100 (264)
T cd06653 23 DADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE--EKKLSIFVEYMPGGSIKDQLKAY 100 (264)
T ss_pred EcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--CCEEEEEEEeCCCCcHHHHHHHc
Confidence 456899999998864321 122345567889999999999999999999886643 24688999999999999998754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~ 149 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..
T Consensus 101 ----~~l~~~~~~~~~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~ 174 (264)
T cd06653 101 ----GALTENVTRRYTRQILQGVSYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPY 174 (264)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCccc
Confidence 348899999999999999999999 7799999999999999999999999998864 12357889
Q ss_pred ccccccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 150 ATRQTYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 150 y~aPE~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+|||+.. .++. ++++++|..||...
T Consensus 175 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 175 WMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred ccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 99999732 2221 78999999999754
No 188
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.93 E-value=4e-25 Score=178.37 Aligned_cols=167 Identities=14% Similarity=0.155 Sum_probs=135.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... .......+..|+.+++.++||||+.+++++...+ .+|+||||+++++|.+++....
T Consensus 14 ~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 88 (277)
T cd05577 14 VKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD----DLCLVMTLMNGGDLKYHIYNVG 88 (277)
T ss_pred EcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC----eEEEEEecCCCCcHHHHHHHcC
Confidence 3567899999998743211 1234456678999999999999999999887643 5899999999999999998654
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+|||
T Consensus 89 ~--~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE 164 (277)
T cd05577 89 E--PGFPEARAIFYAAQIICGLEHLHQ--RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPE 164 (277)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHH
Confidence 2 358999999999999999999999 6799999999999999999999999998764 2346678999999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+. ..++. ++++++|..||.....
T Consensus 165 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 199 (277)
T cd05577 165 VLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE 199 (277)
T ss_pred HhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcc
Confidence 72 22221 6899999999976554
No 189
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93 E-value=3.7e-25 Score=176.27 Aligned_cols=162 Identities=25% Similarity=0.336 Sum_probs=135.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++...... ........+|+.++..++||||+++++++.+.. .+++||+++++++|.+++...
T Consensus 20 ~~~~~~~~~~K~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~~v~~~~~~~~L~~~l~~~- 92 (260)
T PF00069_consen 20 NKKNGQKVAVKIIDKSEIE--EEEREENIREIKILRRLRHPNIVQILDVFQDDN----YLYIVMEYCPGGSLQDYLQKN- 92 (260)
T ss_dssp ETTTTEEEEEEEEESTTHH--HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS----EEEEEEEEETTEBHHHHHHHH-
T ss_pred ECCCCeEEEEEEecccccc--ccccchhhhhhhccccccccccccccccccccc----ccccccccccccccccccccc-
Confidence 4567889999999864222 223334456999999999999999999998743 689999999888999999843
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.+||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+||
T Consensus 93 ---~~~~~~~~~~~~~qi~~~L~~Lh~--~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 167 (260)
T PF00069_consen 93 ---KPLSEEEILKIAYQILEALAYLHS--KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAP 167 (260)
T ss_dssp ---SSBBHHHHHHHHHHHHHHHHHHHH--TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCH
T ss_pred ---cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 348999999999999999999999 7799999999999999999999999998852 457789999999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcc
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+.. ..+. +++|++|..||...
T Consensus 168 E~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 168 EVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp HHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred ccccccccccccccccccccccccccccccccccc
Confidence 9843 3333 68999999999877
No 190
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.93 E-value=3.4e-25 Score=179.33 Aligned_cols=168 Identities=15% Similarity=0.192 Sum_probs=134.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCC-CCCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTH-NDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||+|++... ......+.+|+.++..+ +||||+++++++.... ..+..+++||||+++++|.+++..
T Consensus 39 ~~~~~~~~~ik~~~~~-----~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 113 (286)
T cd06638 39 NKKNGSKAAVKILDPI-----HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKG 113 (286)
T ss_pred ECCCCceeEEEeeccc-----cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHH
Confidence 4567889999987632 12235677899999998 6999999999875432 234578999999999999998875
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
.......+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....+++.|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 191 (286)
T cd06638 114 FLKRGERMEEPIIAYILHEALMGLQHLHV--NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWM 191 (286)
T ss_pred hhccCccccHHHHHHHHHHHHHHHHHHHh--CCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCccc
Confidence 43333568899999999999999999999 7799999999999999999999999998764 2346889999
Q ss_pred ccccCC-------CCch----------hhhhhhCCCCCCcch
Q psy238 152 RQTYGR-------PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 152 aPE~~~-------~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|||+.. .++. ++++++|..||....
T Consensus 192 aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 192 APEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred ChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999631 1111 689999999997553
No 191
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93 E-value=4.1e-25 Score=177.22 Aligned_cols=166 Identities=24% Similarity=0.294 Sum_probs=134.3
Q ss_pred CCCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~-~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|.+...... ........+.+|+.+++.++||||+++++++.... ...++++|+|+++++|.+++...
T Consensus 23 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~l~~e~~~~~~L~~~l~~~ 100 (266)
T cd06651 23 DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA--EKTLTIFMEYMPGGSVKDQLKAY 100 (266)
T ss_pred EcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--CCEEEEEEeCCCCCcHHHHHHHc
Confidence 4567899999998753221 12334567889999999999999999999886532 24689999999999999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~ 149 (218)
..++...++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..
T Consensus 101 ----~~l~~~~~~~~~~qi~~~l~~LH~--~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~ 174 (266)
T cd06651 101 ----GALTESVTRKYTRQILEGMSYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPY 174 (266)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCcccc
Confidence 348899999999999999999999 6699999999999999999999999998753 12357889
Q ss_pred ccccccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 150 ATRQTYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 150 y~aPE~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+|||+.. .++. ++++++|..||...
T Consensus 175 y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 175 WMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred ccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 99999732 2221 79999999999754
No 192
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93 E-value=1.3e-25 Score=182.86 Aligned_cols=161 Identities=16% Similarity=0.263 Sum_probs=133.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+... .......+.+|+.++..++||||+++++.+...+ ..|+||||+++++|.+++..
T Consensus 43 ~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~-- 112 (292)
T cd06658 43 EKHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD----ELWVVMEFLEGGALTDIVTH-- 112 (292)
T ss_pred ECCCCCEEEEEEEecc----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC----eEEEEEeCCCCCcHHHHHhc--
Confidence 3457889999988632 2345567889999999999999999999887643 68999999999999998854
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.||+.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 113 ---~~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP 187 (292)
T cd06658 113 ---TRMNEEQIATVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAP 187 (292)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCH
Confidence 248899999999999999999999 7799999999999999999999999998754 234578899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. ++++++|..||.....
T Consensus 188 E~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 223 (292)
T cd06658 188 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 223 (292)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9732 2222 7999999999975443
No 193
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.93 E-value=5e-25 Score=176.18 Aligned_cols=164 Identities=20% Similarity=0.215 Sum_probs=135.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ........+.+|+.+++.++||||+++++++.+.. .+|+||||+++++|.+++....
T Consensus 14 ~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 88 (262)
T cd05572 14 VKSKNRTFALKCVKKRHI-VETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK----YIYMLMEYCLGGELWTILRDRG 88 (262)
T ss_pred ECCCCcEEEEEEEehhcc-hhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC----ccEEEEecCCCCcHHHHHhhcC
Confidence 345789999999974321 22345577899999999999999999999887643 5899999999999999997643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-------cCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-------ENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-------~~~~t~~y~aPE 154 (218)
.++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..|+|||
T Consensus 89 ----~l~~~~~~~~~~~i~~~l~~lH~--~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE 162 (262)
T cd05572 89 ----LFDEYTARFYIACVVLAFEYLHN--RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPE 162 (262)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChh
Confidence 38999999999999999999999 77999999999999999999999999988752 245688999999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcch
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+. ..++. +|++++|..||....
T Consensus 163 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 163 IILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred HhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 62 22211 699999999997765
No 194
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.93 E-value=6.4e-25 Score=177.23 Aligned_cols=160 Identities=20% Similarity=0.284 Sum_probs=127.1
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
...||+|++... .......+..|+.+++.++||||+++++++.... ..++||||+++++|..++.... .
T Consensus 44 ~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~---~ 112 (274)
T cd05076 44 ELRVVLKVLDPS----HRDIALAFFETASLMSQVSHIHLAFVHGVCVRGS----ENIMVEEFVEHGPLDVCLRKEK---G 112 (274)
T ss_pred eeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCC----ceEEEEecCCCCcHHHHHHhcC---C
Confidence 346999988732 2344567888899999999999999999987654 5899999999999999987532 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-------cEEEeecCcccc----ccCCCcccccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-------LVKIGCDTYTHT----IENKKYLSATRQT 154 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-------~~ki~dfg~~~~----~~~~~t~~y~aPE 154 (218)
.+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++ .++++|||.+.. ....++..|+|||
T Consensus 113 ~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe 190 (274)
T cd05076 113 RVPVAWKITVAQQLASALSYLED--KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPE 190 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHc--CCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCch
Confidence 58999999999999999999999 7799999999999997643 489999998754 3445788899999
Q ss_pred cCC---CCch----------hhhh-hhCCCCCCcchhh
Q psy238 155 YGR---PISG----------QYEI-VTKTNNVTEKKKE 178 (218)
Q Consensus 155 ~~~---~~~~----------~~ei-~tg~~p~~~~~~e 178 (218)
+.. .++. ++++ ++|..||......
T Consensus 191 ~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 191 CVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred hhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 632 1222 5777 5799999765543
No 195
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93 E-value=6.4e-25 Score=179.70 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=134.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||+|.+..... ........+.+|+.++..++||||+++++.+.... ++++||||++|++|.+++...
T Consensus 22 ~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~g~~L~~~l~~~- 95 (305)
T cd05609 22 HKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR----HLCMVMEYVEGGDCATLLKNI- 95 (305)
T ss_pred ECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC----EEEEEEecCCCCcHHHHHHHc-
Confidence 356788999998874321 11334567789999999999999999999886543 689999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------------
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------------------- 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------------------- 141 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 96 ---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 170 (305)
T cd05609 96 ---GALPVDMARMYFAETVLALEYLHN--YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTRE 170 (305)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhh
Confidence 348999999999999999999999 7799999999999999999999999998752
Q ss_pred ---ccCCCcccccccccCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 142 ---IENKKYLSATRQTYGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 142 ---~~~~~t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
....++..|+|||+.. .++. ++++++|..||.+...+
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~ 222 (305)
T cd05609 171 FLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222 (305)
T ss_pred ccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 1135677899999622 2222 68999999999765443
No 196
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93 E-value=5.9e-25 Score=176.32 Aligned_cols=166 Identities=17% Similarity=0.228 Sum_probs=135.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCC--CCCCeEEEEEeccCCCCHHHHHHh
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTH--NDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~--~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
..++..||+|++... ......+.+|+.++..+ .||||+++++++.... .....+|+||+|+++++|.+++..
T Consensus 28 ~~~~~~~~~k~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 102 (275)
T cd06608 28 KKTGQLVAIKIMDII-----EDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKG 102 (275)
T ss_pred CCCCcEEEEEEEecC-----chhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHH
Confidence 457889999998743 22345788999999998 7999999999987654 234578999999999999999876
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
.......+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~ 180 (275)
T cd06608 103 LRKKGKRLKEEWIAYILRETLRGLAYLHE--NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWM 180 (275)
T ss_pred HhhcCCCCCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCcccccccc
Confidence 54223568999999999999999999999 7799999999999999999999999998754 3455788999
Q ss_pred ccccCCC-------Cch----------hhhhhhCCCCCCcc
Q psy238 152 RQTYGRP-------ISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 152 aPE~~~~-------~~~----------~~ei~tg~~p~~~~ 175 (218)
|||+... ++. ++++++|..||...
T Consensus 181 aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 181 APEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred CHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 9996321 111 68999999999754
No 197
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93 E-value=3.9e-25 Score=177.57 Aligned_cols=165 Identities=18% Similarity=0.214 Sum_probs=133.5
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCC--CCeEEEEEeccCCCCHHHHHHh
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHND--KPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
..+++.||+|.+... ......+..|+.++..+ +||||+++++++...... ...+|+||||+++++|.+++..
T Consensus 28 ~~~~~~~aik~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~ 102 (272)
T cd06637 28 VKTGQLAAIKVMDVT-----GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 102 (272)
T ss_pred cCCCcEEEEEEEEcC-----CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHh
Confidence 457889999998743 12234677899999988 799999999998764321 2468999999999999999986
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
... ..+++..+..++.|++.||.|||+ ++|+|+||+|+||+++.++.++|+|||++.. ....++..|+
T Consensus 103 ~~~--~~l~~~~~~~~~~qi~~~l~~LH~--~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~ 178 (272)
T cd06637 103 TKG--NTLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 178 (272)
T ss_pred ccC--CCCCHHHHHHHHHHHHHHHHHHHH--CCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCccccccccc
Confidence 432 458899999999999999999999 7799999999999999999999999999764 2356788999
Q ss_pred ccccCC-------CCch----------hhhhhhCCCCCCcch
Q psy238 152 RQTYGR-------PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 152 aPE~~~-------~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|||+.. .++. ++++++|..||....
T Consensus 179 aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~ 220 (272)
T cd06637 179 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220 (272)
T ss_pred CHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 999732 1211 689999999996543
No 198
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.93 E-value=5e-25 Score=178.27 Aligned_cols=165 Identities=13% Similarity=0.154 Sum_probs=128.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHH---HhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE---NLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~---~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
+..+|..||||.+....... ........++.. ++....||+|+.+++++...+ .+++||||+++++|.+++.
T Consensus 15 ~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~ 89 (279)
T cd05633 15 KADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD----KLCFILDLMNGGDLHYHLS 89 (279)
T ss_pred ECCCCcEEEEEEEEcccccc-chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC----eEEEEEecCCCCCHHHHHH
Confidence 45678999999887432211 122223334443 334457999999999887643 5899999999999999987
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCcccccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATR 152 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~a 152 (218)
.. ..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+|
T Consensus 90 ~~----~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~a 163 (279)
T cd05633 90 QH----GVFSEKEMRFYATEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMA 163 (279)
T ss_pred hc----CCCCHHHHHHHHHHHHHHHHHHHH--CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccC
Confidence 64 349999999999999999999999 7799999999999999999999999998754 33468999999
Q ss_pred cccC---CCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYG---RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~---~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||.. ..++. ++++++|..||.....
T Consensus 164 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 201 (279)
T cd05633 164 PEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 201 (279)
T ss_pred HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC
Confidence 9973 22222 6899999999976543
No 199
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.93 E-value=2.7e-25 Score=179.29 Aligned_cols=161 Identities=19% Similarity=0.209 Sum_probs=133.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... ........+.+|+.+++.++||||+++++++.... .+|+||||+++++|.+++..
T Consensus 25 ~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~-- 95 (277)
T cd06642 25 DNRTKEVVAIKIIDLE---EAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT----KLWIIMEYLGGGSALDLLKP-- 95 (277)
T ss_pred EcCCCeEEEEEEeccc---cchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC----ceEEEEEccCCCcHHHHhhc--
Confidence 4567889999998743 22345567889999999999999999999987643 58999999999999998864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 96 ---~~~~~~~~~~~~~~i~~~l~~lH~--~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 170 (277)
T cd06642 96 ---GPLEETYIATILREILKGLDYLHS--ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhc--CCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCH
Confidence 348899999999999999999999 7799999999999999999999999998864 223578899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..|+....
T Consensus 171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06642 171 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 205 (277)
T ss_pred HHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9732 2222 689999999987543
No 200
>PTZ00284 protein kinase; Provisional
Probab=99.93 E-value=3.6e-25 Score=191.44 Aligned_cols=163 Identities=12% Similarity=0.092 Sum_probs=124.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC------CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE------HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~------hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~ 75 (218)
|..+|..||||++... ......+..|+.++..+. |++++.++++|.... .++|+||+++ +++|.+
T Consensus 150 ~~~~~~~vAvK~i~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~---~~~~iv~~~~-g~~l~~ 220 (467)
T PTZ00284 150 DRKRKEYCAVKIVRNV-----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET---GHMCIVMPKY-GPCLLD 220 (467)
T ss_pred EcCCCeEEEEEEEecc-----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC---ceEEEEEecc-CCCHHH
Confidence 4567889999999632 122333455666665554 456888888886532 4789999998 789999
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC----------------cEEEeecCcc
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG----------------LVKIGCDTYT 139 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~----------------~~ki~dfg~~ 139 (218)
++... ..+++..+..++.||+.||.|||+. .+|+||||||+|||++.++ .++|+|||.+
T Consensus 221 ~l~~~----~~l~~~~~~~i~~qi~~aL~yLH~~-~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~ 295 (467)
T PTZ00284 221 WIMKH----GPFSHRHLAQIIFQTGVALDYFHTE-LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGC 295 (467)
T ss_pred HHHHc----CCCCHHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcc
Confidence 88765 3499999999999999999999971 2599999999999998765 4999999987
Q ss_pred cc-----ccCCCccccccccc--CCCCch----------hhhhhhCCCCCCcchhh
Q psy238 140 HT-----IENKKYLSATRQTY--GRPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 140 ~~-----~~~~~t~~y~aPE~--~~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
.. ....||+.|+|||+ +..++. +|+|++|+.||.+....
T Consensus 296 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 296 CDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred ccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 54 45678999999997 333332 79999999999876543
No 201
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93 E-value=4.2e-25 Score=179.31 Aligned_cols=163 Identities=17% Similarity=0.223 Sum_probs=132.8
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+|..||+|++..............+.+|+.++..+ +||+|+.+++++.... .+|+||||+++++|.+++...
T Consensus 25 ~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 99 (290)
T cd05613 25 HDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT----KLHLILDYINGGELFTHLSQR- 99 (290)
T ss_pred CCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC----eEEEEEecCCCCcHHHHHHHc-
Confidence 3588999999997432222234456778899999999 6899999998887643 589999999999999999765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~a 152 (218)
.++++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+|
T Consensus 100 ---~~l~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~a 174 (290)
T cd05613 100 ---ERFKEQEVQIYSGEIVLALEHLHK--LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMA 174 (290)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCC
Confidence 348899999999999999999999 77999999999999999999999999987641 2347889999
Q ss_pred cccCCC----Cch----------hhhhhhCCCCCCcc
Q psy238 153 QTYGRP----ISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 153 PE~~~~----~~~----------~~ei~tg~~p~~~~ 175 (218)
||+... .+. ++++++|..||...
T Consensus 175 PE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 211 (290)
T cd05613 175 PDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211 (290)
T ss_pred hhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcC
Confidence 997321 111 79999999999643
No 202
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93 E-value=3.5e-25 Score=179.02 Aligned_cols=165 Identities=19% Similarity=0.218 Sum_probs=133.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++.... ........+.+|+.++..+.||||+++++++.... .+++||||+++++|..++...
T Consensus 22 ~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~l~~~~~~~- 94 (286)
T cd07847 22 NRETGQIVAIKKFVESE--DDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR----KLHLVFEYCDHTVLNELEKNP- 94 (286)
T ss_pred ECCCCcEEEEEEEeecc--cCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC----EEEEEEeccCccHHHHHHhCC-
Confidence 34578999999987432 12233456788999999999999999999987643 689999999987777776543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+||
T Consensus 95 ---~~~~~~~~~~~~~ql~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP 169 (286)
T cd07847 95 ---RGVPEHLIKKIIWQTLQAVNFCHK--HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAP 169 (286)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCH
Confidence 348999999999999999999999 77999999999999999999999999988752 23467889999
Q ss_pred ccC---CCCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYG---RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~---~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+. ..++. ++++++|..||.+....
T Consensus 170 E~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~ 207 (286)
T cd07847 170 ELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV 207 (286)
T ss_pred HHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 972 22222 68999999999876543
No 203
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93 E-value=1.8e-25 Score=182.54 Aligned_cols=160 Identities=18% Similarity=0.283 Sum_probs=132.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ......+.+|+.++..+.||||+++++++.... ..|+||||+++++|..++..
T Consensus 42 ~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~iv~e~~~~~~L~~~~~~-- 111 (297)
T cd06659 42 EKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE----ELWVLMEFLQGGALTDIVSQ-- 111 (297)
T ss_pred EcCCCCEEEEEEEEecc----cchHHHHHHHHHHHHhCCCCchhhhhhheeeCC----eEEEEEecCCCCCHHHHHhh--
Confidence 35678999999987432 223456788999999999999999999887644 58999999999999998754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 112 ---~~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP 186 (297)
T cd06659 112 ---TRLNEEQIATVCESVLQALCYLHS--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP 186 (297)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCH
Confidence 248899999999999999999999 7799999999999999999999999998753 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..||....
T Consensus 187 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 221 (297)
T cd06659 187 EVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS 221 (297)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9732 2222 799999999997543
No 204
>KOG0984|consensus
Probab=99.93 E-value=1.3e-25 Score=168.50 Aligned_cols=167 Identities=17% Similarity=0.182 Sum_probs=136.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|...|+|.+... .. .....+.+.|+.+..+. ..|.+|.+||.+.+.+ .+|+.||.|+ .||+.+-..-
T Consensus 67 h~~sg~imAvKri~~t--vn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg----dvwIcME~M~-tSldkfy~~v 138 (282)
T KOG0984|consen 67 HIQSGTIMAVKRIRAT--VN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG----DVWICMELMD-TSLDKFYRKV 138 (282)
T ss_pred eccCCeEEEEeeehhh--cC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc----cEEEeHHHhh-hhHHHHHHHH
Confidence 3578999999999853 22 45556777888876554 7899999999876654 5999999995 7999887776
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
...+..+|+...-+++..++.||.|||+ .+ +||||+||+|||++.+|++||||||.+.. ....|--.|||
T Consensus 139 ~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYma 216 (282)
T KOG0984|consen 139 LKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMA 216 (282)
T ss_pred HhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCC
Confidence 6666789999999999999999999999 55 99999999999999999999999999876 34678889999
Q ss_pred cccCC------CCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYGR------PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~~------~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||... .++. +.||.+++.||+.+...
T Consensus 217 PEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 217 PERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred hhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 99622 2222 68899999999866543
No 205
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93 E-value=6.3e-25 Score=177.26 Aligned_cols=161 Identities=18% Similarity=0.209 Sum_probs=134.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||||++... ........+.+|+.+++.+.||||+++++++.+.. .+|+||||+++++|.+++..
T Consensus 25 ~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~-- 95 (277)
T cd06640 25 DNRTQQVVAIKIIDLE---EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT----KLWIIMEYLGGGSALDLLRA-- 95 (277)
T ss_pred EccCCEEEEEEEEecc---ccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----EEEEEEecCCCCcHHHHHhc--
Confidence 4567889999998743 22345678889999999999999999999987644 69999999999999999864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.+++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 96 ---~~l~~~~~~~~~~~l~~~l~~lh~--~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ap 170 (277)
T cd06640 96 ---GPFDEFQIATMLKEILKGLDYLHS--EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCH
Confidence 248889999999999999999999 7799999999999999999999999998854 223567889999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcch
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+. ..++. ++++++|..||.+..
T Consensus 171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06640 171 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 205 (277)
T ss_pred hHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 973 23332 689999999997654
No 206
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93 E-value=9.4e-25 Score=177.49 Aligned_cols=162 Identities=19% Similarity=0.211 Sum_probs=133.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.. ........+..|+.+++.+.||||+++++++...+ .+|+||||+++++|..++....
T Consensus 33 ~~~~~~~~~~k~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~ 104 (292)
T cd06644 33 NKETGALAAAKVIET----KSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG----KLWIMIEFCPGGAVDAIMLELD 104 (292)
T ss_pred ECCCCceEEEEEecc----CCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC----eEEEEEecCCCCcHHHHHHhhc
Confidence 345789999999873 23455677889999999999999999999887643 6899999999999988876543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....+++.|+||
T Consensus 105 ---~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 179 (292)
T cd06644 105 ---RGLTEPQIQVICRQMLEALQYLHS--MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAP 179 (292)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhc--CCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCc
Confidence 348999999999999999999999 7799999999999999999999999998754 234567899999
Q ss_pred ccCC-------CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR-------PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~-------~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. +++. +|++++|..||....
T Consensus 180 E~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 180 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred eeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 9731 1111 688999999997644
No 207
>KOG0696|consensus
Probab=99.93 E-value=1.1e-26 Score=189.67 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=141.1
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
|.+.||||+++..-.. .....+..+.|-++|... ..|.+++++.+|...+ ++|+||||+.||+|.-.++..+.
T Consensus 373 tdELyAiKiLkKDVii-QdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD----RLyFVMEyvnGGDLMyhiQQ~Gk- 446 (683)
T KOG0696|consen 373 TDELYAIKILKKDVII-QDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD----RLYFVMEYVNGGDLMYHIQQVGK- 446 (683)
T ss_pred cchhhhhhhhccceee-ecCcccceehhhhheecCCCCchHHHHHHHhhhhh----heeeEEEEecCchhhhHHHHhcc-
Confidence 4467999998843221 123345556777777776 5788999999998765 69999999999999999998754
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQTY 155 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE~ 155 (218)
+-++.+..++..|+.||.|||+ +|||+||||.+|||++.+|+++|+|||++.. .+.+||+.|+|||+
T Consensus 447 ---FKEp~AvFYAaEiaigLFFLh~--kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEI 521 (683)
T KOG0696|consen 447 ---FKEPVAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEI 521 (683)
T ss_pred ---cCCchhhhhhHHHHHHhhhhhc--CCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccce
Confidence 8899999999999999999999 8899999999999999999999999999864 67899999999996
Q ss_pred CC--CCc------h----hhhhhhCCCCCCcchhhhhHHHHHHHH
Q psy238 156 GR--PIS------G----QYEIVTKTNNVTEKKKEKEEEEEEEKK 188 (218)
Q Consensus 156 ~~--~~~------~----~~ei~tg~~p~~~~~~ee~~~~~~~~~ 188 (218)
.. |+. . +|||+.|..||++..++|.=....+..
T Consensus 522 i~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn 566 (683)
T KOG0696|consen 522 IAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN 566 (683)
T ss_pred EEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc
Confidence 21 221 1 799999999999988877655555443
No 208
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93 E-value=1e-24 Score=176.39 Aligned_cols=164 Identities=23% Similarity=0.293 Sum_probs=131.7
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..||+|.+.. ........+.+|+.++..++||||+++++++.... ..++||||+++++|.+++......
T Consensus 33 ~~~~~~~~k~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~~ 104 (280)
T cd05092 33 QDKMLVAVKALKE----ASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR----PLLMVFEYMRHGDLNRFLRSHGPD 104 (280)
T ss_pred CCceEEEEEecCc----CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----ceEEEEecCCCCCHHHHHHhcCcc
Confidence 4567899998763 23455668899999999999999999999887644 489999999999999999865321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------
Q psy238 84 -----------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------- 142 (218)
Q Consensus 84 -----------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------- 142 (218)
...+++..++.++.|++.||.|||+ .+++|+||+|+|||+++++.++|+|||++...
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 182 (280)
T cd05092 105 AKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 182 (280)
T ss_pred hhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH--CCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCC
Confidence 1247899999999999999999999 77999999999999999999999999987531
Q ss_pred cCCCccccccccc--CCCCch----------hhhhhh-CCCCCCcchh
Q psy238 143 ENKKYLSATRQTY--GRPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 143 ~~~~t~~y~aPE~--~~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
...+++.|+|||+ +..++. ++++++ |..||.....
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 230 (280)
T cd05092 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230 (280)
T ss_pred CccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH
Confidence 2233578999996 222222 689998 8999866544
No 209
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=6e-25 Score=175.50 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=129.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHh-hcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENL-TQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l-~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||++....... ......+..|..++ ....|||++++++++...+ .+|+||||+++++|.+++...
T Consensus 17 ~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~ 91 (260)
T cd05611 17 KRSTGDYFAIKVLKKSDMIA-KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD----YLYLVMEYLNGGDCASLIKTL 91 (260)
T ss_pred ecCCCCeEEEEEecchhhhH-HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC----eEEEEEeccCCCCHHHHHHHc
Confidence 45678999999987432111 12223344554444 4558999999999987643 689999999999999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccC
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYG 156 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~ 156 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|||..
T Consensus 92 ----~~~~~~~~~~i~~qi~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~ 165 (260)
T cd05611 92 ----GGLPEDWAKQYIAEVVLGVEDLHQ--RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETI 165 (260)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhh
Confidence 348999999999999999999999 7799999999999999999999999998875 345678899999973
Q ss_pred C--CCch----------hhhhhhCCCCCCcchh
Q psy238 157 R--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 157 ~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
. ..+. ++++++|..||.....
T Consensus 166 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 198 (260)
T cd05611 166 LGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP 198 (260)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH
Confidence 2 1111 6899999999976544
No 210
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.93 E-value=7.5e-25 Score=179.98 Aligned_cols=167 Identities=16% Similarity=0.212 Sum_probs=135.8
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|.+...... .......+..|+.++..+.||||+++++.+.+.. ..|+||+|+.+++|.+++.....
T Consensus 23 ~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~ 97 (316)
T cd05574 23 KGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQTET----YLCLVMDYCPGGELFRLLQRQPG 97 (316)
T ss_pred cCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC----EEEEEEEecCCCCHHHHHHhCCC
Confidence 447899999999854221 1235567889999999999999999999986643 68999999999999999875432
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------------------
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-------------------- 142 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-------------------- 142 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++...
T Consensus 98 --~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (316)
T cd05574 98 --KCLSEEVARFYAAEVLLALEYLHL--LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSV 173 (316)
T ss_pred --CccCHHHHHHHHHHHHHHHHHHHH--CCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccc
Confidence 458999999999999999999999 77999999999999999999999999987541
Q ss_pred -----------------cCCCcccccccccCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 143 -----------------ENKKYLSATRQTYGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 143 -----------------~~~~t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
...|+..|+|||+.. ..+. +|++++|..||.+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 174 NSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred cccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 125678899999732 2222 79999999999766543
No 211
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93 E-value=1e-24 Score=176.49 Aligned_cols=166 Identities=21% Similarity=0.192 Sum_probs=131.6
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|.+... ........+.+|+.+++.++||||+++++++.... ..|+||||+++++|.+++.....
T Consensus 31 ~~~~~~~~ik~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~ 103 (283)
T cd05090 31 MDHAQLVAIKTLKDI---NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ----PVCMLFEYLNQGDLHEFLIMRSP 103 (283)
T ss_pred CCCcceEEEEeccCC---CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----ceEEEEEcCCCCcHHHHHHhcCC
Confidence 346678999988732 22344567889999999999999999999987644 48999999999999999864321
Q ss_pred -------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------
Q psy238 83 -------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------- 141 (218)
Q Consensus 83 -------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------- 141 (218)
....+++..+..++.|++.||.|||+ ++++|+||+|+|||++.++.++|+|||++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~ 181 (283)
T cd05090 104 HSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS--HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYR 181 (283)
T ss_pred CCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--cCeehhccccceEEEcCCCcEEeccccccccccCCccee
Confidence 01237888999999999999999999 7799999999999999999999999998864
Q ss_pred --ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 142 --IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 142 --~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
....++..|+|||+. ...+. ++++++ |..||.+...
T Consensus 182 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 182 VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred cccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 223445679999973 22222 688888 9999976543
No 212
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.93 E-value=8.1e-25 Score=175.48 Aligned_cols=157 Identities=20% Similarity=0.275 Sum_probs=126.1
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||+|.+... .......+..|+.++..++||||+++++++.... ..++||||+++++|..++.... ..
T Consensus 33 ~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~---~~ 101 (262)
T cd05077 33 IKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV----ENIMVEEFVEFGPLDLFMHRKS---DV 101 (262)
T ss_pred eeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----CCEEEEecccCCCHHHHHHhcC---CC
Confidence 46899987632 2344557788899999999999999999987654 4799999999999999887542 35
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCc-------EEEeecCcccc----ccCCCccccccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGL-------VKIGCDTYTHT----IENKKYLSATRQTY 155 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~-------~ki~dfg~~~~----~~~~~t~~y~aPE~ 155 (218)
+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++. ++++|||++.. ....++..|+|||+
T Consensus 102 ~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~ 179 (262)
T cd05077 102 LTTPWKFKVAKQLASALSYLED--KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPEC 179 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHhhh--CCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhh
Confidence 8999999999999999999999 77999999999999987654 89999998765 34567889999996
Q ss_pred CC---CCch----------hhhhh-hCCCCCCcch
Q psy238 156 GR---PISG----------QYEIV-TKTNNVTEKK 176 (218)
Q Consensus 156 ~~---~~~~----------~~ei~-tg~~p~~~~~ 176 (218)
.. .++. +|+|+ +|..||....
T Consensus 180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 214 (262)
T cd05077 180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT 214 (262)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 32 2222 68886 6888887654
No 213
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.93 E-value=2.8e-25 Score=177.27 Aligned_cols=166 Identities=19% Similarity=0.239 Sum_probs=137.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|++..... ........+.+|+++++.++||||+++++++.... .+++|++|+.+++|..++...
T Consensus 21 ~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 94 (258)
T cd05578 21 KRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE----NMYLVVDLLLGGDLRYHLSQK- 94 (258)
T ss_pred EccCCcEEEEEEEehhhh-cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC----eEEEEEeCCCCCCHHHHHHhc-
Confidence 456799999999974322 12345678899999999999999999998886543 699999999999999999765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
.++++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+|||
T Consensus 95 ---~~l~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE 169 (258)
T cd05578 95 ---VKFSEEQVKFWICEIVLALEYLHS--KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPE 169 (258)
T ss_pred ---CCcCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHH
Confidence 348999999999999999999999 7799999999999999999999999998865 3456788999999
Q ss_pred cCC--CCc----------hhhhhhhCCCCCCcchhh
Q psy238 155 YGR--PIS----------GQYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 155 ~~~--~~~----------~~~ei~tg~~p~~~~~~e 178 (218)
+.. ..+ .++++++|..||.....+
T Consensus 170 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 205 (258)
T cd05578 170 VLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT 205 (258)
T ss_pred HHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc
Confidence 622 111 179999999999876643
No 214
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.93 E-value=1.3e-25 Score=186.14 Aligned_cols=166 Identities=16% Similarity=0.231 Sum_probs=135.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++.... ........+.+|+.+|..++||||+++++++.........+++||+|+. ++|.+++...
T Consensus 26 ~~~~~~~valK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~- 101 (334)
T cd07855 26 DTRSGKKVAIKKIPHAF--DVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSD- 101 (334)
T ss_pred EcCCCCEEEEEEecccc--ccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccC-
Confidence 45789999999987431 1223456778899999999999999999988765555567999999995 6898888654
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKYLS 149 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t~~ 149 (218)
..+++..++.++.||+.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..
T Consensus 102 ---~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 176 (334)
T cd07855 102 ---QPLTEEHIRYFLYQLLRGLKYIHS--ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRW 176 (334)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCccccccccccc
Confidence 348999999999999999999999 7799999999999999999999999998764 12367889
Q ss_pred ccccccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 150 ATRQTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 150 y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+|||+.. ..+. ++++++|+.||.+..
T Consensus 177 y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~ 216 (334)
T cd07855 177 YRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216 (334)
T ss_pred ccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence 99999621 1111 789999999997654
No 215
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=9.5e-25 Score=173.88 Aligned_cols=160 Identities=17% Similarity=0.275 Sum_probs=130.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||+|.+... .....+.+|+.++..++||||+++++++.... .++||+|+++++|.+++.....
T Consensus 27 ~~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~v~e~~~~~~L~~~l~~~~~- 94 (254)
T cd05083 27 YTGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHNG-----LYIVMELMSKGNLVNFLRTRGR- 94 (254)
T ss_pred cCCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-----cEEEEECCCCCCHHHHHHhcCc-
Confidence 46788999998642 12357889999999999999999999986532 6999999999999999986532
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccCC-
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYGR- 157 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~~- 157 (218)
..+++..++.++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++.. .....+..|+|||...
T Consensus 95 -~~~~~~~~~~~~~qi~~al~~lH~--~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~ 171 (254)
T cd05083 95 -ALVSVIQLLQFSLDVAEGMEYLES--KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKH 171 (254)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhcc
Confidence 458899999999999999999999 7799999999999999999999999998865 2233456799999632
Q ss_pred -CCch----------hhhhhh-CCCCCCcchhh
Q psy238 158 -PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 158 -~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.++. ++++++ |..||.....+
T Consensus 172 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 204 (254)
T cd05083 172 KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204 (254)
T ss_pred CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH
Confidence 2222 688887 99999766543
No 216
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93 E-value=9.5e-25 Score=176.50 Aligned_cols=163 Identities=13% Similarity=0.169 Sum_probs=127.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHH---HHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQV---FENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~e---i~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
+..+|+.||+|.+....... ......+..| +.++....||+|+.+++++.... .+|+||||++|++|..++.
T Consensus 15 ~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~v~e~~~g~~L~~~l~ 89 (278)
T cd05606 15 KADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD----KLSFILDLMNGGDLHYHLS 89 (278)
T ss_pred EecCCCEEEEEEeecccccc-chhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC----EEEEEEecCCCCcHHHHHH
Confidence 35678999999987532221 1111222233 34455568999999999887644 5899999999999999886
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCcccccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATR 152 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~a 152 (218)
.. ..+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....|+..|+|
T Consensus 90 ~~----~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~a 163 (278)
T cd05606 90 QH----GVFSEAEMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMA 163 (278)
T ss_pred hc----CCCCHHHHHHHHHHHHHHHHHHHH--CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcC
Confidence 54 359999999999999999999999 7799999999999999999999999998764 34578999999
Q ss_pred cccCC---CCch----------hhhhhhCCCCCCcc
Q psy238 153 QTYGR---PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 153 PE~~~---~~~~----------~~ei~tg~~p~~~~ 175 (218)
||+.. .++. ++++++|..||...
T Consensus 164 PE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 164 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred cHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 99732 2222 78999999999765
No 217
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=8.8e-25 Score=180.74 Aligned_cols=167 Identities=19% Similarity=0.189 Sum_probs=134.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|++..... .....+.+.+|+.++..++||||++++++|...+ .+|+||+|+.+++|.+++....
T Consensus 21 ~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~----~~~~v~e~~~~~~l~~~l~~~~ 94 (328)
T cd08226 21 HTPTGTLVTVRITDLENC--TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS----WLWVISPFMAYGSANSLLKTYF 94 (328)
T ss_pred EcCCCcEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC----ceEEEEecccCCCHHHHHHhhc
Confidence 467899999999875422 2344578889999999999999999999997744 5899999999999999988754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------------ccCCC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------------IENKK 146 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------------~~~~~ 146 (218)
. ..+++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.++++||+.+.. ....+
T Consensus 95 ~--~~~~~~~~~~~~~qi~~aL~~lH~--~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (328)
T cd08226 95 P--EGMSEALIGNILFGALRGLNYLHQ--NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTS 170 (328)
T ss_pred c--cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccC
Confidence 3 348999999999999999999999 6799999999999999999999999874322 01234
Q ss_pred cccccccccCCC----Cch----------hhhhhhCCCCCCcchhh
Q psy238 147 YLSATRQTYGRP----ISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 147 t~~y~aPE~~~~----~~~----------~~ei~tg~~p~~~~~~e 178 (218)
+..|+|||+... ++. ++++++|..||......
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~ 216 (328)
T cd08226 171 VLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT 216 (328)
T ss_pred ccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH
Confidence 567999997321 111 68999999999876543
No 218
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.93 E-value=6.2e-25 Score=176.88 Aligned_cols=167 Identities=14% Similarity=0.191 Sum_probs=132.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..||+|.+... ........+.+|+.++..++||||+++++++.... ..++||||+++++|.+++......
T Consensus 34 ~~~~~~aik~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~ 106 (277)
T cd05032 34 EPETRVAIKTVNEN---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ----PTLVVMELMAKGDLKSYLRSRRPE 106 (277)
T ss_pred CcceeEEEEecCCc---cCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC----CcEEEEecCCCCCHHHHHHhcccc
Confidence 34578999998642 22344567889999999999999999999987653 589999999999999999764321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCc
Q psy238 84 ------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKY 147 (218)
Q Consensus 84 ------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t 147 (218)
...+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 184 (277)
T cd05032 107 AENNPGLGPPTLQKFIQMAAEIADGMAYLAA--KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLP 184 (277)
T ss_pred hhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCcc
Confidence 1236888999999999999999999 7799999999999999999999999998754 223456
Q ss_pred ccccccccC--CCCch----------hhhhhh-CCCCCCcchhhh
Q psy238 148 LSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 148 ~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
..|+|||.. ..++. +++++| |..||.+...++
T Consensus 185 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 229 (277)
T cd05032 185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE 229 (277)
T ss_pred ccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH
Confidence 789999962 22222 688888 899997655433
No 219
>KOG0662|consensus
Probab=99.93 E-value=4.6e-26 Score=167.86 Aligned_cols=154 Identities=18% Similarity=0.277 Sum_probs=130.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+++.||+|.+...+ +........++||-+|+.+.|.|||+++++..+.. .+-+|++||. .+|..+.....
T Consensus 23 n~~t~eivalkrvrldd--ddegvpssalreicllkelkhknivrl~dvlhsdk----kltlvfe~cd-qdlkkyfdsln 95 (292)
T KOG0662|consen 23 NRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK----KLTLVFEFCD-QDLKKYFDSLN 95 (292)
T ss_pred cCCccceEEEEEEeccC--CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc----eeEEeHHHhh-HHHHHHHHhcC
Confidence 46789999999998763 33556678899999999999999999999875533 5899999995 79999988765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
+.++...++.++.|++.||.|+|+ +++.||||||.|+||+.+|.++++|||+++. .....|.+|.+|
T Consensus 96 ---g~~d~~~~rsfmlqllrgl~fchs--hnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrpp 170 (292)
T KOG0662|consen 96 ---GDLDPEIVRSFMLQLLRGLGFCHS--HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170 (292)
T ss_pred ---CcCCHHHHHHHHHHHHhhhhhhhh--hhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCc
Confidence 459999999999999999999999 7799999999999999999999999999876 556779999999
Q ss_pred cc--CC-CCchhhhhhh
Q psy238 154 TY--GR-PISGQYEIVT 167 (218)
Q Consensus 154 E~--~~-~~~~~~ei~t 167 (218)
.+ |. -++...+||+
T Consensus 171 dvlfgakly~tsidmws 187 (292)
T KOG0662|consen 171 DVLFGAKLYSTSIDMWS 187 (292)
T ss_pred ceeeeeehhccchHhhh
Confidence 97 22 4555555554
No 220
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93 E-value=9.3e-25 Score=174.61 Aligned_cols=161 Identities=19% Similarity=0.234 Sum_probs=129.2
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..||+|.+.... .....+.+|+.+++.++||||+++++++.... .+|+||||+++++|.+++.... .
T Consensus 29 ~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~--~ 97 (261)
T cd05068 29 NTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE----PIYIVTELMKYGSLLEYLQGGA--G 97 (261)
T ss_pred CCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecCC----CeeeeeecccCCcHHHHHhccC--C
Confidence 45679999987431 12456788999999999999999999886643 5899999999999999997653 2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ....+..|+|||+
T Consensus 98 ~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 175 (261)
T cd05068 98 RALKLPQLIDMAAQVASGMAYLEA--QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccc
Confidence 458999999999999999999999 77999999999999999999999999988641 1122357999997
Q ss_pred CC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 GR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.. .++. ++++++ |..||.+....
T Consensus 176 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 176 ALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred cccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 32 2222 688888 99999765443
No 221
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.93 E-value=1e-24 Score=178.48 Aligned_cols=165 Identities=17% Similarity=0.244 Sum_probs=128.8
Q ss_pred CCCcE--EEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 4 EEGVE--VVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 4 ~~g~~--vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
.+|.. +|+|.+.. .........+.+|+.++..+ +||||+++++++...+ .+|+||||+++++|.+++...
T Consensus 30 ~~~~~~~~~ik~~~~---~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~ 102 (303)
T cd05088 30 KDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----YLYLAIEYAPHGNLLDFLRKS 102 (303)
T ss_pred cCCceeeEEEEEecc---cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC----CceEEEEeCCCCcHHHHHHhc
Confidence 45554 56666542 12234556788899999999 8999999999987644 589999999999999999765
Q ss_pred cc------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------
Q psy238 81 KR------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------- 141 (218)
Q Consensus 81 ~~------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------- 141 (218)
.. ....+++..++.++.|++.||.|||+ +|++||||+|+|||++.++.++|+|||++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 180 (303)
T cd05088 103 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 180 (303)
T ss_pred ccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEecCCCcEEeCccccCcccchhhhc
Confidence 31 12358899999999999999999999 7799999999999999999999999998853
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.....+..|+|||+. ..++. +++++| |..||.....
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 229 (303)
T cd05088 181 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229 (303)
T ss_pred ccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh
Confidence 122335679999962 22221 789998 9999975543
No 222
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.93 E-value=1.2e-24 Score=173.08 Aligned_cols=164 Identities=18% Similarity=0.289 Sum_probs=134.7
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
++..||+|.+..... ......+.+|+.++..++|+||+++++++... ..+++||+|+++++|.+++......
T Consensus 22 ~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~ 94 (262)
T cd00192 22 KTTEVAVKTLKEDAS---EEERKDFLKEARVMKKLGHPNVVRLLGVCTEE----EPLYLVLEYMEGGDLLDYLRKSRPVF 94 (262)
T ss_pred CCceEEeEeeccccc---hhHHHHHHHHHHHHhhcCCCChheeeeeecCC----CceEEEEEeccCCcHHHHHhhccccc
Confidence 478899999985321 22467888999999999999999999998763 3589999999999999999875211
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCccc
Q psy238 84 ----VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLS 149 (218)
Q Consensus 84 ----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~ 149 (218)
...+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...+++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 172 (262)
T cd00192 95 PSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR 172 (262)
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHc--CCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCcc
Confidence 2459999999999999999999999 77999999999999999999999999988752 3456788
Q ss_pred ccccccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 150 ATRQTYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 150 y~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
|+|||... .++. ++++++ |..||.....
T Consensus 173 y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 173 WMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred ccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999732 2222 688888 6999987643
No 223
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=8e-25 Score=174.52 Aligned_cols=160 Identities=20% Similarity=0.264 Sum_probs=129.1
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
.|..||+|.+... .....+.+|+.+++.++|||++++++++.... ..+++||||+++++|.+++.....
T Consensus 28 ~~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~-- 96 (256)
T cd05082 28 RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK---GGLYIVTEYMAKGSLVDYLRSRGR-- 96 (256)
T ss_pred cCCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC---CceEEEEECCCCCcHHHHHHhcCC--
Confidence 5778999988631 23456889999999999999999999765432 258999999999999999986532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccCC--
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYGR-- 157 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~~-- 157 (218)
..+++..++.++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++.. ....++..|+|||+..
T Consensus 97 ~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 174 (256)
T cd05082 97 SVLGGDCLLKFSLDVCEAMEYLEA--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 174 (256)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccC
Confidence 348899999999999999999999 7799999999999999999999999998775 2334466899999722
Q ss_pred CCch----------hhhhhh-CCCCCCcchh
Q psy238 158 PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 158 ~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.++. +|+|++ |..||.....
T Consensus 175 ~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~ 205 (256)
T cd05082 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205 (256)
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCCCH
Confidence 2222 688887 9999875443
No 224
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=8.8e-25 Score=176.99 Aligned_cols=164 Identities=18% Similarity=0.214 Sum_probs=132.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|.+... ........+.+|+.++..++||||+++++++...+ .+++||||+++++|..++....
T Consensus 23 ~~~~~~~a~k~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~- 94 (286)
T cd06622 23 RPTGVTMAMKEIRLE---LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG----AVYMCMEYMDAGSLDKLYAGGV- 94 (286)
T ss_pred cCCCcEEEEEEeecc---cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC----eEEEEEeecCCCCHHHHHHhcc-
Confidence 457899999988742 12334567889999999999999999999887643 6899999999999999887632
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCcccccccccC
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTYG 156 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~~ 156 (218)
....+++..+..++.|++.||.|||+. .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+|||+.
T Consensus 95 ~~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~ 173 (286)
T cd06622 95 ATEGIPEDVLRRITYAVVKGLKFLKEE-HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERI 173 (286)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhc-CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchh
Confidence 123589999999999999999999961 3599999999999999999999999998764 335678899999973
Q ss_pred C--CC------c----------hhhhhhhCCCCCCcc
Q psy238 157 R--PI------S----------GQYEIVTKTNNVTEK 175 (218)
Q Consensus 157 ~--~~------~----------~~~ei~tg~~p~~~~ 175 (218)
. .. + .++++++|..||...
T Consensus 174 ~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 174 KSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred cCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 1 11 1 179999999999654
No 225
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93 E-value=1.4e-24 Score=175.61 Aligned_cols=166 Identities=17% Similarity=0.149 Sum_probs=131.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
.++..||||.+... ........+..|+.++..++||||+++++++.... .++++++|+++++|.+++.....
T Consensus 33 ~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~----~~~~~~e~~~~~~l~~~l~~~~~~ 105 (283)
T cd05091 33 EQTQAVAIKTLKDK---AEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ----PLSMIFSYCSHSDLHEFLVMRSPH 105 (283)
T ss_pred CceeEEEEEEccCC---CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC----ceEEEEEcCCCCcHHHHHHhcCCC
Confidence 34678999998742 22345567889999999999999999999987654 48999999999999999864311
Q ss_pred -----------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------
Q psy238 83 -----------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------- 141 (218)
Q Consensus 83 -----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------- 141 (218)
....+++..++.++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~--~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 183 (283)
T cd05091 106 SDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS--HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLM 183 (283)
T ss_pred ccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--cCccccccchhheEecCCCceEecccccccccccchheeec
Confidence 11347888999999999999999999 7799999999999999999999999998654
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
....+++.|+|||.. ..++. ++++++ |..||.+....
T Consensus 184 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 233 (283)
T cd05091 184 GNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 233 (283)
T ss_pred cCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 123346789999963 22222 689998 88888765443
No 226
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.93 E-value=5.7e-25 Score=176.16 Aligned_cols=164 Identities=18% Similarity=0.286 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEEeecccccc--cHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKN--FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~--~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..+|..||+|++....... .......+.+|+.+++.++||||+++++++.+.+ .+++||+|+++++|.+++..
T Consensus 21 ~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~v~e~~~~~~L~~~l~~ 96 (268)
T cd06630 21 DVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS----HFNLFVEWMAGGSVSHLLSK 96 (268)
T ss_pred EcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC----eEEEEEeccCCCcHHHHHHH
Confidence 45789999999997532211 1235678899999999999999999999987644 58999999999999999976
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-cEEEeecCccccc------------cCCC
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-LVKIGCDTYTHTI------------ENKK 146 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~~------------~~~~ 146 (218)
. .++++..++.++.|++.||.|||+ .+++|+||+|+||+++.++ .++|+|||.+... ...+
T Consensus 97 ~----~~~~~~~~~~~~~ql~~al~~LH~--~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 170 (268)
T cd06630 97 Y----GAFKEAVIINYTEQLLRGLSYLHE--NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLG 170 (268)
T ss_pred h----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCcccccccc
Confidence 4 348999999999999999999999 7799999999999998775 6999999987541 2356
Q ss_pred cccccccccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 147 YLSATRQTYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 147 t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
+..|+|||+.. ..+. ++++++|..||...
T Consensus 171 ~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 211 (268)
T cd06630 171 TIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE 211 (268)
T ss_pred ccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 78999999732 2221 69999999999643
No 227
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.93 E-value=9.3e-25 Score=174.88 Aligned_cols=163 Identities=19% Similarity=0.307 Sum_probs=133.1
Q ss_pred CCCcEEEEEEeecccc--cccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 4 EEGVEVVWNEVQFSER--KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~--~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
.+|..||+|.+..... .........+.+|+.+++.++|+||+++++++.+.. .+++||||+++++|.+++...
T Consensus 22 ~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 96 (265)
T cd06631 22 NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN----TISIFMEFVPGGSISSILNRF- 96 (265)
T ss_pred cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC----eEEEEEecCCCCcHHHHHHhc-
Confidence 4688899999875321 112334456889999999999999999999987653 689999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------------ccCCCc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------------IENKKY 147 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------------~~~~~t 147 (218)
.+++...+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++
T Consensus 97 ---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
T cd06631 97 ---GPLPEPVFCKYTKQILDGVAYLHN--NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGT 171 (265)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCC
Confidence 348899999999999999999999 7799999999999999999999999998753 134578
Q ss_pred ccccccccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 148 LSATRQTYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 148 ~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
..|+|||+.. ..+. ++++++|..||....
T Consensus 172 ~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 212 (265)
T cd06631 172 PYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD 212 (265)
T ss_pred ccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence 8999999732 2221 689999999997653
No 228
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93 E-value=1.8e-24 Score=173.53 Aligned_cols=169 Identities=17% Similarity=0.250 Sum_probs=132.4
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
++..||+|.+... .........+.+|+.+++.++||||+++++++..... .....++||+|+++++|..++.....
T Consensus 26 ~~~~vaiK~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~ 103 (273)
T cd05035 26 SQLKVAVKTMKLD--IHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRL 103 (273)
T ss_pred CcceEEEEEeccC--cCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhc
Confidence 4578999998743 2224455678999999999999999999998765332 22347899999999999999865432
Q ss_pred --cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccc
Q psy238 83 --NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSA 150 (218)
Q Consensus 83 --~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y 150 (218)
....+++..+..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++... ....+..|
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~aL~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 181 (273)
T cd05035 104 GGLPEKLPLQTLLKFMVDIALGMEYLSN--RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 181 (273)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHHHHh--CCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccc
Confidence 22358999999999999999999999 77999999999999999999999999998751 12345689
Q ss_pred cccccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 151 TRQTYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
+|||+.. .++. ++++++ |..||.+...
T Consensus 182 ~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~ 221 (273)
T cd05035 182 IAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN 221 (273)
T ss_pred cCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999732 2222 688888 8899876543
No 229
>KOG0579|consensus
Probab=99.93 E-value=5.2e-26 Score=193.86 Aligned_cols=156 Identities=18% Similarity=0.229 Sum_probs=132.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+.+++...|.|++. .........++-||.||..+.||+||.|++.|...+ .+||+.|||.||.++.++-...
T Consensus 53 nket~~lAAaKvIe----tkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en----kLwiliEFC~GGAVDaimlEL~ 124 (1187)
T KOG0579|consen 53 NKETKLLAAAKVIE----TKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN----KLWILIEFCGGGAVDAIMLELG 124 (1187)
T ss_pred cccchhhhhhhhhc----ccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC----ceEEEEeecCCchHhHHHHHhc
Confidence 45666777888887 334567788999999999999999999999876644 5999999999999999887765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.++.++++..+++|++.||.|||+ ++|||||||..|||+.-+|.++|+|||.+.. .+..||+.||||
T Consensus 125 ---r~LtE~QIqvvc~q~ldALn~LHs--~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAP 199 (1187)
T KOG0579|consen 125 ---RVLTEDQIQVVCYQVLDALNWLHS--QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAP 199 (1187)
T ss_pred ---cccchHHHHHHHHHHHHHHHHHhh--cchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccc
Confidence 469999999999999999999999 7899999999999999999999999998854 678999999999
Q ss_pred cc-------CCCCchhhhhhhCCC
Q psy238 154 TY-------GRPISGQYEIVTKTN 170 (218)
Q Consensus 154 E~-------~~~~~~~~ei~tg~~ 170 (218)
|+ ..|++...|||+-..
T Consensus 200 EVvmCET~KD~PYDykaDiWSlGI 223 (1187)
T KOG0579|consen 200 EVVMCETFKDQPYDYKADIWSLGI 223 (1187)
T ss_pred hheeeccccCCCchhhhhHHhhhh
Confidence 97 236666666666443
No 230
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.4e-24 Score=177.51 Aligned_cols=166 Identities=18% Similarity=0.249 Sum_probs=130.9
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
++..||+|.+... ........+.+|+.++..+ .||||+++++++.... .+++||||+++++|.+++......
T Consensus 46 ~~~~v~iK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~ 118 (304)
T cd05101 46 EAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPP 118 (304)
T ss_pred cceeEEeeecccc---cchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC----ceEEEEecCCCCcHHHHHHhcCCc
Confidence 4557999988632 2234556788999999999 8999999999987644 589999999999999999864321
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------
Q psy238 84 ------------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------- 141 (218)
Q Consensus 84 ------------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------- 141 (218)
...+++..+..++.|++.||.|||+ +|++|+||+|+|||++.++.++|+|||++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~--~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~ 196 (304)
T cd05101 119 GMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKT 196 (304)
T ss_pred ccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH--CCeeecccccceEEEcCCCcEEECCCccceecccccccccc
Confidence 1247888899999999999999999 7799999999999999999999999998764
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhhh
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
....++..|+|||+. ..++. ++++++ |..||.+...++
T Consensus 197 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 197 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred cCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 123345679999963 22222 678887 788887655443
No 231
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.93 E-value=1.3e-24 Score=180.81 Aligned_cols=166 Identities=19% Similarity=0.237 Sum_probs=130.0
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+++.||||++... ........+.+|+.++..+ +||||+++++++...+ ..+++||||+++++|.+++....
T Consensus 34 ~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~L~~~i~~~~ 107 (343)
T cd05103 34 TATCRTVAVKMLKEG---ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEFCKFGNLSNYLRSKR 107 (343)
T ss_pred cccceeEEEEEeccC---CChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC---CceEEEEeccCCCcHHHHHHhcC
Confidence 457889999999742 1233456788999999999 7899999999886543 35799999999999999987532
Q ss_pred cc---------------------------------------------------------------CCCCCHHHHHHHHHH
Q psy238 82 RN---------------------------------------------------------------VKKLPLSAWKRWCSQ 98 (218)
Q Consensus 82 ~~---------------------------------------------------------------~~~~~~~~~~~~~~q 98 (218)
.. ...+++..+..++.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 187 (343)
T cd05103 108 GEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQ 187 (343)
T ss_pred CccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHH
Confidence 10 023678888999999
Q ss_pred HHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccccC--CCCch-----
Q psy238 99 ILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQTYG--RPISG----- 161 (218)
Q Consensus 99 i~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE~~--~~~~~----- 161 (218)
++.||.|||+ .+|+||||+|+|||++.++.++|+|||++... ...+++.|+|||+. ..++.
T Consensus 188 i~~al~~lH~--~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 265 (343)
T cd05103 188 VAKGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 265 (343)
T ss_pred HHHHHHHHHh--CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHH
Confidence 9999999999 77999999999999999999999999987641 22345679999962 22222
Q ss_pred -----hhhhhh-CCCCCCcch
Q psy238 162 -----QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 162 -----~~ei~t-g~~p~~~~~ 176 (218)
++++++ |..||....
T Consensus 266 slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 266 SFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred HHHHHHHHHHHCCCCCCCCcc
Confidence 678886 899987643
No 232
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93 E-value=7.1e-25 Score=176.49 Aligned_cols=161 Identities=20% Similarity=0.214 Sum_probs=134.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++.... .......+.+|+.+++.++||||+++++++.+.. .+|+|+||+++++|.+++...
T Consensus 22 ~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~- 93 (274)
T cd06609 22 DKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS----KLWIIMEYCGGGSCLDLLKPG- 93 (274)
T ss_pred ECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC----eEEEEEEeeCCCcHHHHHhhc-
Confidence 45688999999997532 2344566789999999999999999999887643 689999999999999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
++++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 94 ----~~~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P 167 (274)
T cd06609 94 ----KLDETYIAFILREVLLGLEYLHE--EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAP 167 (274)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccCh
Confidence 48999999999999999999999 7799999999999999999999999998765 234567889999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. ++++++|..||....
T Consensus 168 E~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~ 202 (274)
T cd06609 168 EVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH 202 (274)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc
Confidence 9732 2222 689999999997543
No 233
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.93 E-value=2.3e-24 Score=172.85 Aligned_cols=162 Identities=20% Similarity=0.306 Sum_probs=131.1
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
+...||||.+... ........+.+|+.++..++||||+++++++.... ..++||||+++++|.+++....
T Consensus 31 ~~~~vaik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~iv~e~~~~~~L~~~~~~~~--- 100 (266)
T cd05033 31 KEIDVAIKTLKAG---SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR----PVMIITEYMENGSLDKFLREND--- 100 (266)
T ss_pred CcceEEEEEcCCC---CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC----ceEEEEEcCCCCCHHHHHHhcc---
Confidence 3457999988642 22445567888999999999999999999887644 4899999999999999997643
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQT 154 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE 154 (218)
..+++..++.++.|++.||.|||+ ++|+|+||+|+|||++.++.++|+|||++... ...++..|+|||
T Consensus 101 ~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe 178 (266)
T cd05033 101 GKFTVGQLVGMLRGIASGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPE 178 (266)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChh
Confidence 358999999999999999999999 77999999999999999999999999988752 123456899999
Q ss_pred cCC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 155 YGR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
... .++. ++++++ |..||.....+
T Consensus 179 ~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~ 215 (266)
T cd05033 179 AIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ 215 (266)
T ss_pred hhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH
Confidence 732 2221 688887 99999765543
No 234
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=1.5e-24 Score=174.45 Aligned_cols=164 Identities=17% Similarity=0.256 Sum_probs=128.8
Q ss_pred CCCc--EEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 4 EEGV--EVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 4 ~~g~--~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
.+|. .+|+|.+.. .........+..|+.++..+ +||||+++++++...+ .+++||||+++++|.+++...
T Consensus 18 ~~~~~~~~~~k~~~~---~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~ 90 (270)
T cd05047 18 KDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----YLYLAIEYAPHGNLLDFLRKS 90 (270)
T ss_pred CCCCeeEEEEEEccc---cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC----CceEEEEeCCCCcHHHHHHhc
Confidence 4454 468887762 12234556788999999999 8999999999987644 489999999999999999764
Q ss_pred cc------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------
Q psy238 81 KR------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------- 141 (218)
Q Consensus 81 ~~------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------- 141 (218)
.. ....+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~ 168 (270)
T cd05047 91 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 168 (270)
T ss_pred cccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccccceEEEcCCCeEEECCCCCccccchhhhc
Confidence 31 11247899999999999999999999 7799999999999999999999999998753
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcch
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
.....+..|+|||+. ..++. +++|++ |..||.+..
T Consensus 169 ~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 216 (270)
T cd05047 169 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216 (270)
T ss_pred cCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC
Confidence 223335679999972 22222 688987 999997654
No 235
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=2e-24 Score=171.43 Aligned_cols=163 Identities=18% Similarity=0.216 Sum_probs=131.1
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..||+|.+... ........+.+|+.++..++||||+++++++.... ..++||||+++++|.+++....
T Consensus 17 ~~~~~~a~K~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~-- 87 (250)
T cd05085 17 KDKTPVAVKTCKED---LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ----PIYIVMELVPGGDFLSFLRKKK-- 87 (250)
T ss_pred cCCcEEEEEecCCc---CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC----ccEEEEECCCCCcHHHHHHhcC--
Confidence 35778999988732 22344557889999999999999999999987654 4899999999999999987543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQT 154 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE 154 (218)
..+++..+..++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++.. ....+++.|+|||
T Consensus 88 -~~~~~~~~~~~~~~i~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE 164 (250)
T cd05085 88 -DELKTKQLVKFALDAAAGMAYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPE 164 (250)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHH
Confidence 347899999999999999999999 7799999999999999999999999998864 1223356799999
Q ss_pred cCC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 155 YGR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
+.. .++. ++++++ |..||......
T Consensus 165 ~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~ 201 (250)
T cd05085 165 ALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ 201 (250)
T ss_pred HhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH
Confidence 732 2222 688887 99999765443
No 236
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.93 E-value=1.9e-24 Score=183.36 Aligned_cols=165 Identities=20% Similarity=0.232 Sum_probs=130.1
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.++..||+|++... ......+.+.+|+.+|..+. ||||+++++++.... .+++||||+++|+|.+++.....
T Consensus 65 ~~~~~vavK~l~~~---~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~----~~~iv~E~~~~g~L~~~l~~~~~ 137 (401)
T cd05107 65 QSTMKVAVKMLKST---ARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG----PIYIITEYCRYGDLVDYLHRNKH 137 (401)
T ss_pred CCceEEEEEecCCC---CChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC----CcEEEEeccCCCcHHHHHHhccc
Confidence 45678999999743 12334457889999999997 999999999987644 58999999999999999975421
Q ss_pred --------------------------------------------------------------------------------
Q psy238 83 -------------------------------------------------------------------------------- 82 (218)
Q Consensus 83 -------------------------------------------------------------------------------- 82 (218)
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (401)
T cd05107 138 TFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYL 217 (401)
T ss_pred cchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhh
Confidence
Q ss_pred --------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc------
Q psy238 83 --------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------ 142 (218)
Q Consensus 83 --------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------ 142 (218)
....+++..++.++.|++.||.|||+ .+++||||+|+|||++.++.++|+|||++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~ 295 (401)
T cd05107 218 PSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS--KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY 295 (401)
T ss_pred cccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc
Confidence 11236777889999999999999999 77999999999999999999999999998641
Q ss_pred ----cCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 143 ----ENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 143 ----~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
...++..|+|||+. ..++. ++++++ |..||.....
T Consensus 296 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 296 ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 23456789999963 22222 678887 8899976543
No 237
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93 E-value=1.2e-24 Score=178.02 Aligned_cols=162 Identities=20% Similarity=0.270 Sum_probs=130.6
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.++..||||.+... ........+.+|+.+++.+ +||||+++++++...+ .+++||||+++++|.+++.....
T Consensus 63 ~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~ 135 (302)
T cd05055 63 DAVMKVAVKMLKPT---AHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG----PILVITEYCCYGDLLNFLRRKRE 135 (302)
T ss_pred CceeEEEEEecCcc---CChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC----ceEEEEEcCCCCcHHHHHHhCCC
Confidence 34568999988742 1234456788999999999 7999999999987654 48999999999999999976432
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATR 152 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++++|||++... ...++..|+|
T Consensus 136 --~~l~~~~~~~i~~~i~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a 211 (302)
T cd05055 136 --SFLTLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMA 211 (302)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCC
Confidence 338999999999999999999999 77999999999999999999999999988641 1234577999
Q ss_pred cccC--CCCch----------hhhhhh-CCCCCCcch
Q psy238 153 QTYG--RPISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
||.. ..++. ++++++ |..||....
T Consensus 212 PE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~ 248 (302)
T cd05055 212 PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP 248 (302)
T ss_pred HhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC
Confidence 9962 22222 688887 999987544
No 238
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93 E-value=1.2e-24 Score=176.69 Aligned_cols=169 Identities=17% Similarity=0.156 Sum_probs=134.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||+|++... ......+.+|+.++..+ .|||++++++++..... ....+++||||+++++|.+++..
T Consensus 43 ~~~~~~~~aik~~~~~-----~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~ 117 (291)
T cd06639 43 NKKDGSLAAVKILDPI-----SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKG 117 (291)
T ss_pred ECCCCCEEEEEEeccc-----ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHH
Confidence 3467899999998632 12335567888899988 89999999999875432 23568999999999999999875
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
.......+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 195 (291)
T cd06639 118 LLICGQRLDEAMISYILYGALLGLQHLHN--NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWM 195 (291)
T ss_pred hhhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCcccc
Confidence 43333568999999999999999999999 6799999999999999999999999998764 2346788999
Q ss_pred ccccCCC-------Cch----------hhhhhhCCCCCCcchh
Q psy238 152 RQTYGRP-------ISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 152 aPE~~~~-------~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|||+... ++. ++++++|+.||.....
T Consensus 196 aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 196 APEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred ChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 9996210 111 6899999999976543
No 239
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.93 E-value=2.2e-25 Score=180.27 Aligned_cols=162 Identities=17% Similarity=0.214 Sum_probs=130.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+.+|+.+++.++||||+++++++.+.. .+++|+||++ ++|.+++....
T Consensus 21 ~~~~g~~~~~k~~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 93 (284)
T cd07839 21 NRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLYDVLHSDK----KLTLVFEYCD-QDLKKYFDSCN 93 (284)
T ss_pred ECCCCcEEEEEEeecccc--cccCccchhHHHHHHHhcCCCCeeeHHHHhccCC----ceEEEEecCC-CCHHHHHHhcC
Confidence 456899999999975321 1223356778999999999999999999987644 5899999996 68888876542
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.||+.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 94 ---~~~~~~~~~~~~~qi~~al~~LH~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 168 (284)
T cd07839 94 ---GDIDPEIVKSFMFQLLKGLAFCHS--HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 168 (284)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcCh
Confidence 358999999999999999999999 7799999999999999999999999998764 234568899999
Q ss_pred ccC--C-CCch----------hhhhhhCCCCCCcc
Q psy238 154 TYG--R-PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~--~-~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+. . .++. +++|++|..|+...
T Consensus 169 E~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~ 203 (284)
T cd07839 169 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 203 (284)
T ss_pred HHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 962 2 1222 68899999997543
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93 E-value=1.4e-24 Score=174.23 Aligned_cols=161 Identities=20% Similarity=0.212 Sum_probs=131.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||+|.+... .......+.+|+.+++.++||||+++++++...+ .+++||||+++++|.+++....
T Consensus 29 ~~~~~~~v~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 100 (268)
T cd06624 29 DLSTQVRIAIKEIPER----DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG----FFKIFMEQVPGGSLSALLRSKW 100 (268)
T ss_pred ecCCCcEEEEEEecCC----CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC----EEEEEEecCCCCCHHHHHHHhc
Confidence 4567889999988742 2345567889999999999999999999987643 6899999999999999998643
Q ss_pred ccCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc--------ccCCCcccc
Q psy238 82 RNVKKL--PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 82 ~~~~~~--~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
.++ +...+..++.|++.||.|||+ .+|+|+||+|+||+++. ++.++|+|||.+.. ....++..|
T Consensus 101 ---~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 175 (268)
T cd06624 101 ---GPLKDNEQTIIFYTKQILEGLKYLHD--NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQY 175 (268)
T ss_pred ---ccCCCcHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccc
Confidence 224 788899999999999999999 77999999999999976 67999999998754 234578899
Q ss_pred cccccCCC----Cch----------hhhhhhCCCCCCcc
Q psy238 151 TRQTYGRP----ISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 151 ~aPE~~~~----~~~----------~~ei~tg~~p~~~~ 175 (218)
+|||+... ++. ++++++|..||.+.
T Consensus 176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~ 214 (268)
T cd06624 176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL 214 (268)
T ss_pred cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence 99997321 111 68999999999754
No 241
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.93 E-value=4.3e-25 Score=178.54 Aligned_cols=165 Identities=19% Similarity=0.292 Sum_probs=133.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+.... ........+.+|+.+++.++||||+++++++.+.. .+++||||+. ++|..++....
T Consensus 21 ~~~~~~~~~ik~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~-~~l~~~~~~~~ 93 (284)
T cd07860 21 NKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLH-QDLKKFMDASP 93 (284)
T ss_pred ECCCCCEEEEEEccccc--cccccchHHHHHHHHHHhcCCCCCcchhhhcccCC----cEEEEeeccc-cCHHHHHHhCC
Confidence 45688999999887532 11233457888999999999999999999986543 5899999995 68999887653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 94 ~--~~l~~~~~~~~~~~i~~~l~~lh~--~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 169 (284)
T cd07860 94 L--SGIPLPLIKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 169 (284)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCC
Confidence 2 458999999999999999999999 7799999999999999999999999998764 223457889999
Q ss_pred ccCC--C-Cch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR--P-ISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~-~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. . .+. +++++||..||.+...
T Consensus 170 E~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~ 206 (284)
T cd07860 170 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 206 (284)
T ss_pred eEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 9622 2 122 6899999999976543
No 242
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.93 E-value=5.4e-25 Score=178.66 Aligned_cols=162 Identities=19% Similarity=0.252 Sum_probs=130.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+..... ......+.+|+.+++.++||||+++++++.+.. ..++||||+. ++|.+++....
T Consensus 26 ~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~-~~L~~~~~~~~ 97 (291)
T cd07844 26 SKLTGQLVALKEIRLEHE---EGAPFTAIREASLLKDLKHANIVTLHDIIHTKK----TLTLVFEYLD-TDLKQYMDDCG 97 (291)
T ss_pred EcCCCcEEEEEEEecccc---cCCchhHHHHHHHHhhCCCcceeeEEEEEecCC----eEEEEEecCC-CCHHHHHHhCC
Confidence 345789999999874321 112234678999999999999999999987643 6899999997 59999887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+||
T Consensus 98 ---~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aP 172 (291)
T cd07844 98 ---GGLSMHNVRLFLFQLLRGLAYCHQ--RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPP 172 (291)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCc
Confidence 358999999999999999999999 7799999999999999999999999998764 123457889999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. .++. +++|++|..||....
T Consensus 173 E~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 173 DVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred HHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 9632 2222 789999999997554
No 243
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93 E-value=2.7e-24 Score=172.88 Aligned_cols=161 Identities=17% Similarity=0.232 Sum_probs=125.9
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.+++|.+... ........+.+|+.++..++||||+++++.+.... ..|+||||+++++|.+++.........+
T Consensus 24 ~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 96 (268)
T cd05086 24 RVVVKELKAN---ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI----PYLLVFEYCELGDLKSYLSQEQWHRRNS 96 (268)
T ss_pred eEEEEEecCC---CChHHHHHHHHHHHHHhccCCcchhheEEEecCCC----ccEEEEecCCCCcHHHHHHhhhcccccc
Confidence 4566665532 22345668899999999999999999999987654 4899999999999999998754333457
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccccCC
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTYGR 157 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~~~ 157 (218)
+...++.++.||+.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++..|+|||+..
T Consensus 97 ~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 174 (268)
T cd05086 97 QLLLLQRMACEIAAGVTHMHK--HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVG 174 (268)
T ss_pred cHHHHHHHHHHHHHHHHHHHH--CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcc
Confidence 778889999999999999999 6799999999999999999999999998753 2335678999999732
Q ss_pred C---------Cch----------hhhhhh-CCCCCCcchh
Q psy238 158 P---------ISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 158 ~---------~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
. .+. +++|++ |..||.....
T Consensus 175 ~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 214 (268)
T cd05086 175 EFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD 214 (268)
T ss_pred cccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH
Confidence 1 111 578876 4667765443
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=1.2e-24 Score=176.14 Aligned_cols=164 Identities=14% Similarity=0.192 Sum_probs=135.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++... ........+.+|++++..++||||+++++++.... .+++||||+++++|.+++...
T Consensus 27 ~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~-- 97 (284)
T cd06620 27 IPTGTVMAKKVVHIG---AKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN----NICMCMEFMDCGSLDRIYKKG-- 97 (284)
T ss_pred cCCCcEEEEEEEEec---CcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC----EEEEEEecCCCCCHHHHHHhc--
Confidence 457899999988743 22445677899999999999999999999987753 689999999999999988764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCcccccccccC
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTYG 156 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~~ 156 (218)
+++++..+..++.+++.||.|||+. .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|||+.
T Consensus 98 --~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~ 174 (284)
T cd06620 98 --GPIPVEILGKIAVAVVEGLTYLYNV-HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERI 174 (284)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHHh-cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHH
Confidence 3489999999999999999999972 3599999999999999999999999998754 335789999999972
Q ss_pred --CCCch----------hhhhhhCCCCCCcchhh
Q psy238 157 --RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 157 --~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
..++. ++++++|..||......
T Consensus 175 ~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred ccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 22221 68999999999865543
No 245
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.93 E-value=1.7e-24 Score=175.06 Aligned_cols=158 Identities=17% Similarity=0.274 Sum_probs=126.3
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.||+|.+.. .........+..|+.++..+.||||+++++++... ..+++++|+++++|.+++.... ..+
T Consensus 38 ~~~~k~~~~---~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~-----~~~~i~e~~~~gsL~~~l~~~~---~~~ 106 (279)
T cd05111 38 PVAIKTIQD---RSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-----SLQLVTQLSPLGSLLDHVRQHR---DSL 106 (279)
T ss_pred EEEEeeccc---ccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-----ccEEEEEeCCCCcHHHHHHhcc---cCC
Confidence 477777753 22233445677888889999999999999987532 3789999999999999997643 358
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccccC-
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTYG- 156 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~~- 156 (218)
++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||.+.. ....++..|+|||+.
T Consensus 107 ~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~ 184 (279)
T cd05111 107 DPQRLLNWCVQIAKGMYYLEE--HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL 184 (279)
T ss_pred CHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhc
Confidence 999999999999999999999 7799999999999999999999999998864 123456789999973
Q ss_pred -CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 157 -RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 157 -~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
..++. +|++++ |..||.+....
T Consensus 185 ~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 218 (279)
T cd05111 185 FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH 218 (279)
T ss_pred cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 22322 688998 99999776443
No 246
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.93 E-value=1e-24 Score=173.99 Aligned_cols=160 Identities=20% Similarity=0.305 Sum_probs=127.5
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..+|+|.+.... .....+.+|+.+++.++||||+++++++...+ ..|+||||+++++|.+++....
T Consensus 27 ~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~--- 94 (256)
T cd05059 27 GKIDVAIKMIREGA-----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR----PIFIVTEYMANGCLLNYLRERK--- 94 (256)
T ss_pred CCccEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----ceEEEEecCCCCCHHHHHHhcc---
Confidence 45679999886321 12345778999999999999999999886543 5899999999999999997643
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~ 155 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|||+
T Consensus 95 ~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~ 172 (256)
T cd05059 95 GKLGTEWLLDMCSDVCEAMEYLES--NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEV 172 (256)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHH
Confidence 358999999999999999999999 77999999999999999999999999987641 1223457999997
Q ss_pred C--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 G--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
. ..++. ++++++ |..||......
T Consensus 173 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 208 (256)
T cd05059 173 FDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS 208 (256)
T ss_pred hccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH
Confidence 3 23322 688888 89999765443
No 247
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.93 E-value=1.8e-24 Score=175.70 Aligned_cols=166 Identities=16% Similarity=0.228 Sum_probs=131.3
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc--
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK-- 81 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-- 81 (218)
.+..||+|.+... ........+.+|+.++..+ .||||+++++++...+ .++++|||+++++|..++....
T Consensus 41 ~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~----~~~li~e~~~~~~L~~~l~~~~~~ 113 (293)
T cd05053 41 ETSTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG----PLYVVVEYAAHGNLRDFLRARRPP 113 (293)
T ss_pred CceeEEEEEccCC---CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC----CeEEEEEeCCCCcHHHHHHhcCCC
Confidence 3467999988742 2233456688999999999 7999999999987644 4899999999999999997532
Q ss_pred ----------ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------
Q psy238 82 ----------RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------- 141 (218)
Q Consensus 82 ----------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------- 141 (218)
.....+++..++.++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++..
T Consensus 114 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~ 191 (293)
T cd05053 114 GEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS--KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT 191 (293)
T ss_pred ccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCccccccceeeEEEcCCCeEEeCccccccccccccceecc
Confidence 123458899999999999999999999 7799999999999999999999999998864
Q ss_pred ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhhh
Q psy238 142 IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 142 ~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
....++..|+|||+. ..++. ++++++ |..||.....++
T Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 192 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred CCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 122345679999962 22211 688887 999997665443
No 248
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.93 E-value=1.3e-24 Score=173.44 Aligned_cols=158 Identities=20% Similarity=0.295 Sum_probs=128.6
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+..... ......+.+|+.+++.+.||||+++++++... .+++||+|+++++|.+++....
T Consensus 23 ~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~v~e~~~~~~L~~~l~~~~---- 90 (257)
T cd05060 23 EVEVAVKTLKQEHI---AAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-----PLMLVMELAPLGPLLKYLKKRR---- 90 (257)
T ss_pred cceEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-----ceEEEEEeCCCCcHHHHHHhCC----
Confidence 47899999875322 24556788999999999999999999987542 4799999999999999998653
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCcccccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLSATRQT 154 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~y~aPE 154 (218)
.+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+|||
T Consensus 91 ~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 168 (257)
T cd05060 91 EIPVSDLKELAHQVAMGMAYLES--KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPE 168 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhh--cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHH
Confidence 48999999999999999999999 77999999999999999999999999987641 122245799999
Q ss_pred cCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 155 YGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
+.. .++. ++++++ |..||.....
T Consensus 169 ~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~ 204 (257)
T cd05060 169 CINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG 204 (257)
T ss_pred HhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH
Confidence 622 2221 789998 9999976543
No 249
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.93 E-value=8.3e-25 Score=174.41 Aligned_cols=164 Identities=21% Similarity=0.234 Sum_probs=134.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++..... ........+.+|+.++..++||||+++++.+... ..+|+||+|+++++|.+++....
T Consensus 15 ~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~- 88 (265)
T cd05579 15 KSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK----KNLYLVMEYLPGGDLASLLENVG- 88 (265)
T ss_pred CCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC----cEEEEEEecCCCCcHHHHHHHcC-
Confidence 45789999999874322 1235567888999999999999999999887653 36899999999999999998653
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------------cCCC
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------------ENKK 146 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------------~~~~ 146 (218)
.+++..++.++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...+
T Consensus 89 ---~~~~~~~~~i~~qi~~~L~~lH~--~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
T cd05579 89 ---SLDEDVARIYIAEIVLALEYLHS--NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVG 163 (265)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHH--cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCccc
Confidence 48999999999999999999999 77999999999999999999999999987641 2346
Q ss_pred cccccccccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 147 YLSATRQTYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 147 t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+..|+|||+.. ..+. ++++++|..||.....
T Consensus 164 ~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 206 (265)
T cd05579 164 TPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP 206 (265)
T ss_pred CccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 78899999632 1111 6899999999976553
No 250
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=1.9e-24 Score=172.23 Aligned_cols=160 Identities=19% Similarity=0.235 Sum_probs=131.9
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||||.+..... ......+.+|+.+++.++||||+++++++.. . .+++||||+++++|.+++..... ..
T Consensus 24 ~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~----~~~~v~e~~~~~~L~~~l~~~~~--~~ 93 (257)
T cd05040 24 IPVAVKCLKSDKL---SDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H----PLMMVTELAPLGSLLDRLRKDAL--GH 93 (257)
T ss_pred eEEEEeecCCccc---HHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C----eEEEEEEecCCCcHHHHHHhccc--cc
Confidence 3699999874321 1567788999999999999999999999876 2 58999999999999999987542 45
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCccccccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLSATRQTY 155 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~y~aPE~ 155 (218)
+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|||+
T Consensus 94 ~~~~~~~~~~~qi~~~L~~lH~--~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~ 171 (257)
T cd05040 94 FLISTLCDYAVQIANGMRYLES--KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES 171 (257)
T ss_pred CcHHHHHHHHHHHHHHHHHHHh--CCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHH
Confidence 8999999999999999999999 77999999999999999999999999987652 2346778999996
Q ss_pred CC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 GR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.. .++. +++|++ |..||......
T Consensus 172 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 207 (257)
T cd05040 172 LRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS 207 (257)
T ss_pred hcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 32 2222 688888 99999755443
No 251
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93 E-value=9.9e-25 Score=174.23 Aligned_cols=159 Identities=20% Similarity=0.266 Sum_probs=130.7
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+... .......+..|+.++..++||||+++++++.+.. .+++||||+++++|.+++..... .
T Consensus 30 ~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~--~ 99 (261)
T cd05148 30 RVRVAIKILKSD----DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE----PVYIITELMEKGSLLAFLRSPEG--Q 99 (261)
T ss_pred CCcEEEEecccc----chhhHHHHHHHHHHHhcCCCcchhheeeeEecCC----CeEEEEeecccCCHHHHHhcCCC--C
Confidence 678999998742 2334556888999999999999999999987654 58999999999999999986532 4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccccC-
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQTYG- 156 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE~~- 156 (218)
.+++..++.++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++.. ....++..|+|||..
T Consensus 100 ~~~~~~~~~~~~~i~~al~~lH~--~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~ 177 (261)
T cd05148 100 VLPVASLIDMACQVAEGMAYLEE--QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAAS 177 (261)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH--CCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHc
Confidence 58999999999999999999999 7799999999999999999999999998864 222446789999973
Q ss_pred -CCCch----------hhhhhh-CCCCCCcch
Q psy238 157 -RPISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 157 -~~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
..++. ++++++ |..||....
T Consensus 178 ~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~ 209 (261)
T cd05148 178 HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN 209 (261)
T ss_pred cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC
Confidence 22222 678887 899997654
No 252
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.93 E-value=1.3e-24 Score=175.59 Aligned_cols=164 Identities=18% Similarity=0.274 Sum_probs=134.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... .......+.+|+.+++.++||||+++++++.... .+++||||+ +++|.+++....
T Consensus 21 ~~~~~~~~~vK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~ 93 (286)
T cd07832 21 DRETGETVALKKVALRRL--EGGIPNQALREIKALQACQHPYVVKLLDVFPHGS----GFVLVMEYM-PSDLSEVLRDEE 93 (286)
T ss_pred ECCCCceEEEEEEEcccc--cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC----eeEEEeccc-CCCHHHHHHhcC
Confidence 346789999999985422 1334567889999999999999999999987643 689999999 999999987643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
.++++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+|
T Consensus 94 ---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a 168 (286)
T cd07832 94 ---RPLPEAQVKSYMRMLLKGVAYMHA--NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRA 168 (286)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccC
Confidence 458999999999999999999999 7799999999999999999999999998765 13456889999
Q ss_pred cccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+.. ..+. ++++++|..||.+...
T Consensus 169 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~ 206 (286)
T cd07832 169 PELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND 206 (286)
T ss_pred ceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH
Confidence 99732 1122 6899999888865443
No 253
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93 E-value=1.4e-24 Score=176.26 Aligned_cols=164 Identities=18% Similarity=0.272 Sum_probs=130.2
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc---
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--- 82 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--- 82 (218)
+..||+|.+... ........+.+|+.++..++||||+++++.+...+ ..++||+|+.+++|.+++.....
T Consensus 30 ~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~ 102 (290)
T cd05045 30 YTTVAVKMLKEN---ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG----PLLLIVEYAKYGSLRSFLRESRKVGP 102 (290)
T ss_pred ceeEEEEecCCC---CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----CcEEEEEecCCCCHHHHHHhcCCccc
Confidence 356888888642 22344567889999999999999999999887654 47999999999999999875321
Q ss_pred -----------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----
Q psy238 83 -----------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---- 141 (218)
Q Consensus 83 -----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---- 141 (218)
...++++..++.++.|++.||.|||+ .+++||||+|+|||+++++.++|+|||++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~ 180 (290)
T cd05045 103 SYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE--MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE 180 (290)
T ss_pred cccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH--CCeehhhhhhheEEEcCCCcEEeccccccccccCc
Confidence 11347889999999999999999999 7799999999999999999999999999864
Q ss_pred ------ccCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 142 ------IENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 142 ------~~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
....++..|+|||.. ..++. ++++++ |..||.+...+
T Consensus 181 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 181 DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred cchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 122446789999962 22222 688888 99999766543
No 254
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=2e-24 Score=171.87 Aligned_cols=165 Identities=21% Similarity=0.281 Sum_probs=135.9
Q ss_pred CCCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~-~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|.+...... ........+.+|+.++..++||||+++++++.+.. .+++|+||+++++|.+++...
T Consensus 21 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~ 96 (258)
T cd06632 21 NLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED----NLYIFLELVPGGSLAKLLKKY 96 (258)
T ss_pred EcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC----eEEEEEEecCCCcHHHHHHhc
Confidence 3457899999998754321 22345567889999999999999999999886643 589999999999999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQ 153 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 97 ----~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~p 170 (258)
T cd06632 97 ----GSFPEPVIRLYTRQILLGLEYLHD--RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAP 170 (258)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCH
Confidence 348899999999999999999999 7799999999999999999999999998764 345578889999
Q ss_pred ccCCC---Cch----------hhhhhhCCCCCCcch
Q psy238 154 TYGRP---ISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~~---~~~----------~~ei~tg~~p~~~~~ 176 (218)
|.... ++. ++++++|..||....
T Consensus 171 e~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 171 EVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred HHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 96321 221 689999999997665
No 255
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93 E-value=1.7e-24 Score=174.86 Aligned_cols=157 Identities=16% Similarity=0.253 Sum_probs=127.4
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.||+|++... ........+.+|+.++..+.||||+++++++... ..+++|+|+++|+|.+++.... ..+
T Consensus 38 ~va~K~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~l~~~~~~~g~l~~~l~~~~---~~~ 106 (279)
T cd05109 38 PVAIKVLREN---TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-----TVQLVTQLMPYGCLLDYVRENK---DRI 106 (279)
T ss_pred EEEEEEecCC---CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-----CcEEEEEcCCCCCHHHHHhhcc---CCC
Confidence 4899988642 2344566788999999999999999999988653 3689999999999999987643 358
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccccC-
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQTYG- 156 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE~~- 156 (218)
++..++.++.|++.||.|||+ ++|+|+||+|+|||++.++.++|+|||++... ...++..|+|||..
T Consensus 107 ~~~~~~~~~~qi~~~L~~lH~--~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 184 (279)
T cd05109 107 GSQDLLNWCVQIAKGMSYLEE--VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 184 (279)
T ss_pred CHHHHHHHHHHHHHHHHHHHH--CCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhc
Confidence 999999999999999999999 77999999999999999999999999988641 12335679999973
Q ss_pred -CCCch----------hhhhhh-CCCCCCcchh
Q psy238 157 -RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 157 -~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
..++. ++++++ |..||.....
T Consensus 185 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 217 (279)
T cd05109 185 HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA 217 (279)
T ss_pred cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 22222 688888 8999876543
No 256
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.93 E-value=1.2e-24 Score=176.29 Aligned_cols=161 Identities=24% Similarity=0.314 Sum_probs=129.7
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|.+... ........+.+|+.+++.+.||||+++++++...+ ...+++||||+++++|.+++....
T Consensus 30 ~~~~~~va~K~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~~~- 103 (284)
T cd05079 30 DNTGEQVAVKSLKPE---SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--GNGIKLIMEFLPSGSLKEYLPRNK- 103 (284)
T ss_pred CCccceEEEEEcCcc---ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--CCceEEEEEccCCCCHHHHHHhcc-
Confidence 457889999998642 22445567899999999999999999999887642 235899999999999999987542
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLSAT 151 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~y~ 151 (218)
..+++..++.++.|++.||.|||+ +|++|+||+|+|||++.++.++|+|||++.. ....++..|+
T Consensus 104 --~~~~~~~~~~i~~~i~~aL~~lH~--~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~ 179 (284)
T cd05079 104 --NKINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWY 179 (284)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCcccc
Confidence 348999999999999999999999 7799999999999999999999999998764 1234566799
Q ss_pred ccccC--CCCch----------hhhhhhCCCCCC
Q psy238 152 RQTYG--RPISG----------QYEIVTKTNNVT 173 (218)
Q Consensus 152 aPE~~--~~~~~----------~~ei~tg~~p~~ 173 (218)
|||+. ..++. +++++++..|..
T Consensus 180 apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~ 213 (284)
T cd05079 180 APECLIQSKFYIASDVWSFGVTLYELLTYCDSES 213 (284)
T ss_pred CHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence 99962 22222 678888776653
No 257
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93 E-value=1.1e-24 Score=175.62 Aligned_cols=161 Identities=20% Similarity=0.235 Sum_probs=131.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC---CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~---hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
+..+|..||+|.+... ........+.+|+.+++.+. |||++++++++.... ..|+||||+++++|.+++.
T Consensus 22 ~~~~~~~~~iK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~ 94 (277)
T cd06917 22 HVPTGRVVALKIINLD---TPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP----RLWIIMEYAEGGSVRTLMK 94 (277)
T ss_pred EcCCCcEEEEEEecCC---CCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC----EEEEEEecCCCCcHHHHHH
Confidence 4568899999998742 22334456788999988886 999999999886543 6899999999999999986
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSA 150 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y 150 (218)
.. .+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|
T Consensus 95 ~~-----~l~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y 167 (277)
T cd06917 95 AG-----PIAEKYISVIIREVLVALKYIHK--VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYW 167 (277)
T ss_pred cc-----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcce
Confidence 42 48999999999999999999999 6799999999999999999999999998764 234578889
Q ss_pred cccccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 151 TRQTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 151 ~aPE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+|||... .++. +++|++|..||....
T Consensus 168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 206 (277)
T cd06917 168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD 206 (277)
T ss_pred eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999632 2222 689999999997543
No 258
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93 E-value=1.7e-24 Score=173.42 Aligned_cols=158 Identities=22% Similarity=0.238 Sum_probs=126.5
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||+|.+.... .....+.+|+.+++.++||||+++++++... ..++||+|+++++|.+++..... ..
T Consensus 31 ~~valK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~--~~ 98 (262)
T cd05071 31 TRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIVTEYMSKGSLLDFLKGEMG--KY 98 (262)
T ss_pred ceEEEEecccCc-----cCHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CcEEEEEcCCCCcHHHHHhhccc--cC
Confidence 469999987421 1234678899999999999999999887432 37999999999999999976432 34
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccccC-
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTYG- 156 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~~- 156 (218)
+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..|+|||+.
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 176 (262)
T cd05071 99 LRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 176 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH--CCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhc
Confidence 7899999999999999999999 77999999999999999999999999988641 22345679999973
Q ss_pred -CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 157 -RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 157 -~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
..++. ++++++ |..||......
T Consensus 177 ~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 177 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 22222 688888 88899766543
No 259
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.93 E-value=1.7e-24 Score=172.91 Aligned_cols=158 Identities=18% Similarity=0.292 Sum_probs=128.0
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||||.+.... .....+.+|+.++..++||||+++++++.... .+++||||+.+++|.+++.... .
T Consensus 28 ~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~i~~~~---~ 95 (256)
T cd05113 28 QYDVAIKMIKEGS-----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR----PIYIVTEYMSNGCLLNYLREHG---K 95 (256)
T ss_pred CCcEEEEEcCCCc-----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC----CcEEEEEcCCCCcHHHHHHhcC---C
Confidence 3469999886321 12356889999999999999999999986644 4799999999999999987643 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccccccC
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQTYG 156 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~~ 156 (218)
.+++..++.++.|++.||.|||+ .+++|+||+|.|||++.++.++|+|||.+.. ....++..|+|||+.
T Consensus 96 ~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~ 173 (256)
T cd05113 96 RFQPSQLLEMCKDVCEGMAYLES--KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 173 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHH
Confidence 58999999999999999999999 7799999999999999999999999998764 122345679999973
Q ss_pred C--CCch----------hhhhhh-CCCCCCcchh
Q psy238 157 R--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 157 ~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
. .++. ++++++ |..||.....
T Consensus 174 ~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 207 (256)
T cd05113 174 LYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN 207 (256)
T ss_pred hcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 2 2222 688888 9999976554
No 260
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93 E-value=2e-24 Score=172.01 Aligned_cols=164 Identities=21% Similarity=0.372 Sum_probs=134.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+.+|+.+++.++||||+++++++...+ +.++||||+++++|.+++....
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~ 94 (256)
T cd08218 21 SKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENG----NLYIVMDYCEGGDLYKKINAQR 94 (256)
T ss_pred EcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC----eEEEEEecCCCCcHHHHHHhcc
Confidence 346789999999875322 2334567889999999999999999999986643 6899999999999999987643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~aP 153 (218)
. ..+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...+++.|+||
T Consensus 95 ~--~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~p 170 (256)
T cd08218 95 G--VLFPEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSP 170 (256)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCH
Confidence 2 347899999999999999999999 77999999999999999999999999988651 23578889999
Q ss_pred ccC--CCCch----------hhhhhhCCCCCCcc
Q psy238 154 TYG--RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~--~~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+. ..++. ++++++|..||...
T Consensus 171 e~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08218 171 EICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG 204 (256)
T ss_pred HHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence 972 22221 68899999999754
No 261
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=1.7e-24 Score=173.06 Aligned_cols=159 Identities=20% Similarity=0.244 Sum_probs=127.6
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..||+|.+..... ....+.+|+.+++.++||+|+++++++... ..++||+|+++++|.+++.....
T Consensus 28 ~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~- 96 (260)
T cd05070 28 NGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVSEE-----PIYIVTEYMSKGSLLDFLKDGEG- 96 (260)
T ss_pred cCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEECCC-----CcEEEEEecCCCcHHHHHHhcCC-
Confidence 3567799998874321 234688999999999999999999887432 37899999999999999976432
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQT 154 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE 154 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..|+|||
T Consensus 97 -~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 173 (260)
T cd05070 97 -RALKLPNLVDMAAQVAAGMAYIER--MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE 173 (260)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChH
Confidence 458999999999999999999999 77999999999999999999999999988641 123456799999
Q ss_pred cC--CCCch----------hhhhhh-CCCCCCcch
Q psy238 155 YG--RPISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
+. ...+. ++++++ |..||.+..
T Consensus 174 ~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 208 (260)
T cd05070 174 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 208 (260)
T ss_pred HHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 73 22222 688888 889997644
No 262
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.92 E-value=2e-24 Score=174.57 Aligned_cols=165 Identities=16% Similarity=0.208 Sum_probs=133.0
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
..+|..||+|++... ......+..|+.++..+ +||||+++++++..... ....+|++|||+++++|.+++..
T Consensus 38 ~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 112 (282)
T cd06636 38 VKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKN 112 (282)
T ss_pred cCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHH
Confidence 457889999998642 23345678889999888 79999999999864321 23578999999999999999986
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
... ..+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....+++.|+
T Consensus 113 ~~~--~~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ 188 (282)
T cd06636 113 TKG--NALKEDWIAYICREILRGLAHLHA--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 188 (282)
T ss_pred ccC--CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCccccccccc
Confidence 543 348888999999999999999999 7799999999999999999999999998754 2355788999
Q ss_pred ccccCC-------CCch----------hhhhhhCCCCCCcch
Q psy238 152 RQTYGR-------PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 152 aPE~~~-------~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|||+.. .++. ++++++|..||....
T Consensus 189 aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 189 APEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred CHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 999632 1111 799999999997543
No 263
>KOG0666|consensus
Probab=99.92 E-value=2.7e-26 Score=181.32 Aligned_cols=159 Identities=21% Similarity=0.226 Sum_probs=129.5
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC-CC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV-KK 86 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~-~~ 86 (218)
.+|||.+... .+.......+.+|+.+++.++||||+.|..+|...+ ..++++++|.+ .+|+++|+.+.... ..
T Consensus 55 ~yAiKkfk~~--kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d---~~v~l~fdYAE-hDL~~II~fHr~~~~~~ 128 (438)
T KOG0666|consen 55 EYAIKKFKGE--KDGTGISMSACREIALLRELKHPNVISLVKVFLSHD---KKVWLLFDYAE-HDLWHIIKFHRASKAKQ 128 (438)
T ss_pred hhHHHHHhcc--CCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC---ceEEEEehhhh-hhHHHHHHHhccchhcc
Confidence 7888888754 233456678899999999999999999999887643 46999999996 69999998775422 35
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC----CcEEEeecCcccc-----------ccCCCccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN----GLVKIGCDTYTHT-----------IENKKYLSAT 151 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~----~~~ki~dfg~~~~-----------~~~~~t~~y~ 151 (218)
+|...+..++.||+.|+.|||+ +=|+||||||.|||+..+ |.++|+|+|+++. ...+.|++|.
T Consensus 129 lp~~mvKsilwQil~Gv~YLH~--NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR 206 (438)
T KOG0666|consen 129 LPRSMVKSILWQILDGVHYLHS--NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR 206 (438)
T ss_pred CCHHHHHHHHHHHHhhhHHHhh--hheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence 8999999999999999999999 669999999999999877 9999999999876 4456799999
Q ss_pred cccc--CC-CCch----------hhhhhhCCCCCCc
Q psy238 152 RQTY--GR-PISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 152 aPE~--~~-~~~~----------~~ei~tg~~p~~~ 174 (218)
|||+ |. -++. ..|+++-..-|.+
T Consensus 207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9997 22 4444 4566666666643
No 264
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.92 E-value=1.6e-24 Score=173.24 Aligned_cols=159 Identities=21% Similarity=0.230 Sum_probs=127.2
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+.... .....+.+|+.+++.+.|||++++++++... ..++||+|+++++|.+++..... .
T Consensus 30 ~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~e~~~~~~L~~~~~~~~~--~ 97 (260)
T cd05069 30 TTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE-----PIYIVTEFMGKGSLLDFLKEGDG--K 97 (260)
T ss_pred CceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CcEEEEEcCCCCCHHHHHhhCCC--C
Confidence 3468999876321 2335678899999999999999999887432 37899999999999999976432 4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccccC
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTYG 156 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~~ 156 (218)
.+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|||+.
T Consensus 98 ~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 175 (260)
T cd05069 98 YLKLPQLVDMAAQIADGMAYIER--MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 175 (260)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHh
Confidence 48899999999999999999999 77999999999999999999999999988641 22345679999973
Q ss_pred C--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 157 R--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 157 ~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
. ..+. +|++++ |..||.+....
T Consensus 176 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 176 LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred ccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 2 2222 688998 89999765543
No 265
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.92 E-value=1.9e-24 Score=175.50 Aligned_cols=163 Identities=18% Similarity=0.199 Sum_probs=129.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++..... ......+.+|+.+++.++|+||+++++++.... ..|+||||+. ++|.+++....
T Consensus 26 ~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 97 (291)
T cd07870 26 SRINGQLVALKVISMKTE---EGVPFTAIREASLLKGLKHANIVLLHDIIHTKE----TLTFVFEYMH-TDLAQYMIQHP 97 (291)
T ss_pred EcCCCcEEEEEEecccCc---CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC----eEEEEEeccc-CCHHHHHHhCC
Confidence 456789999999874321 122335678999999999999999999987543 6899999995 78887775432
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....+++.|+||
T Consensus 98 ---~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (291)
T cd07870 98 ---GGLHPYNVRLFMFQLLRGLAYIHG--QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172 (291)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCC
Confidence 347888899999999999999999 7799999999999999999999999998764 233468899999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. ..+. ++++++|..||.....
T Consensus 173 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~ 209 (291)
T cd07870 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD 209 (291)
T ss_pred ceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence 9732 1222 7999999999976544
No 266
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.92 E-value=3.2e-24 Score=172.32 Aligned_cols=166 Identities=18% Similarity=0.239 Sum_probs=128.5
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHhhcc--c
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKRTKR--N 83 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~~~--~ 83 (218)
.||+|.+... .........+..|+.++..++||||+++++++..... .....+++|+|+++++|.+++..... .
T Consensus 28 ~~a~k~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~ 105 (272)
T cd05075 28 KVAVKTMKIA--ICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDC 105 (272)
T ss_pred eEEEEecccC--cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCC
Confidence 6899988743 2224556778899999999999999999998754321 22357899999999999998854321 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQ 153 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aP 153 (218)
...+++..+..++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++... ...+++.|+||
T Consensus 106 ~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~p 183 (272)
T cd05075 106 PQYLPTQMLVKFMTDIASGMEYLSS--KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183 (272)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCH
Confidence 2348899999999999999999999 77999999999999999999999999997641 12345679999
Q ss_pred ccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 154 TYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
|+.. .++. ++++++ |..||.....
T Consensus 184 e~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 220 (272)
T cd05075 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN 220 (272)
T ss_pred HHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9732 2222 688888 8889976433
No 267
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.92 E-value=2.4e-24 Score=172.86 Aligned_cols=160 Identities=19% Similarity=0.288 Sum_probs=128.4
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+... ........+.+|+.++..++||||+++++++...+ .+|+||||+++++|.+++.... .
T Consensus 32 ~~~~~ik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~---~ 101 (267)
T cd05066 32 EIPVAIKTLKAG---YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK----PVMIVTEYMENGSLDAFLRKHD---G 101 (267)
T ss_pred ceEEEEEECCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----ccEEEEEcCCCCCHHHHHHhcC---C
Confidence 347999988642 22344567889999999999999999999986543 5899999999999999997643 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCcccccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLSATRQT 154 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~y~aPE 154 (218)
.+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+|||
T Consensus 102 ~~~~~~~~~i~~~i~~~l~~lH~--~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe 179 (267)
T cd05066 102 QFTVIQLVGMLRGIASGMKYLSD--MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 179 (267)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH--CCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHh
Confidence 58899999999999999999999 77999999999999999999999999987641 112245799999
Q ss_pred cCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 155 YGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
+.. .++. ++++++ |..||.+...
T Consensus 180 ~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~ 215 (267)
T cd05066 180 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215 (267)
T ss_pred HhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence 732 2221 688776 9999976644
No 268
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.92 E-value=3e-24 Score=174.60 Aligned_cols=165 Identities=22% Similarity=0.248 Sum_probs=131.6
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc--
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR-- 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-- 82 (218)
.+..||+|.+... ........+.+|+.+++.++||||+++++++.... .+++||+++++++|.+++.....
T Consensus 45 ~~~~va~K~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~ 117 (296)
T cd05051 45 APVLVAVKVLRPD---ASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDP----PLCMIMEYMENGDLNQFLQKHVAET 117 (296)
T ss_pred CceeEEEEEecCc---cCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCC----CcEEEEecCCCCCHHHHHHhccccc
Confidence 4567999998743 22345677889999999999999999999987643 58999999999999999987541
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCc
Q psy238 83 -----NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKY 147 (218)
Q Consensus 83 -----~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t 147 (218)
....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 195 (296)
T cd05051 118 SGLACNSKSLSFSTLLYMATQIASGMRYLES--LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLP 195 (296)
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHHHHH--cCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCC
Confidence 11258999999999999999999999 7799999999999999999999999998764 123446
Q ss_pred ccccccccCC--CCch----------hhhhhh--CCCCCCcchhh
Q psy238 148 LSATRQTYGR--PISG----------QYEIVT--KTNNVTEKKKE 178 (218)
Q Consensus 148 ~~y~aPE~~~--~~~~----------~~ei~t--g~~p~~~~~~e 178 (218)
..|+|||+.. .++. +|++++ |..||......
T Consensus 196 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 196 IRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred ceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 7899999622 2222 688877 77788765443
No 269
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.92 E-value=1.5e-24 Score=175.20 Aligned_cols=166 Identities=17% Similarity=0.277 Sum_probs=134.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+..... ......+.+|+.+++.++||||+++++++.+.+ .+++||||++ ++|.+++....
T Consensus 21 ~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 92 (284)
T cd07836 21 NRTTGEIVALKEIHLDAE---EGTPSTAIREISLMKELKHENIVRLHDVIHTEN----KLMLVFEYMD-KDLKKYMDTHG 92 (284)
T ss_pred ECCCCeEEEEEEeccccc---ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC----cEEEEEecCC-ccHHHHHHhcC
Confidence 456899999999975422 223355678999999999999999999987754 5899999997 58999887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ...+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|++|
T Consensus 93 ~-~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P 169 (284)
T cd07836 93 V-RGALDPNTVKSFTYQLLKGIAFCHE--NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAP 169 (284)
T ss_pred C-CCCcCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccCh
Confidence 2 2358999999999999999999999 7799999999999999999999999998864 234568889999
Q ss_pred ccC--C-CCch----------hhhhhhCCCCCCcchhh
Q psy238 154 TYG--R-PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 154 E~~--~-~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|+. . .++. ++++++|..||.+....
T Consensus 170 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~ 207 (284)
T cd07836 170 DVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE 207 (284)
T ss_pred HHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 963 2 1121 68999999999876543
No 270
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.92 E-value=2.1e-24 Score=180.19 Aligned_cols=164 Identities=18% Similarity=0.165 Sum_probs=131.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..+|..||||.+... .........+.+|+.++..++||||++++++|..... +..+.|+||||+. ++|.+.+..
T Consensus 37 ~~~~~~~vaiK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 113 (353)
T cd07850 37 DTVTGQNVAIKKLSRP--FQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM 113 (353)
T ss_pred ECCCCCEEEEEecCcc--ccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhh
Confidence 4568999999988632 1223344567789999999999999999998865432 2246899999995 688888754
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
. ++...+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+|
T Consensus 114 ~------l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~a 185 (353)
T cd07850 114 D------LDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 185 (353)
T ss_pred c------CCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccC
Confidence 2 8889999999999999999999 7799999999999999999999999999875 23456888999
Q ss_pred ccc--CCCCch----------hhhhhhCCCCCCcch
Q psy238 153 QTY--GRPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~--~~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||+ +..++. ++++++|+.||....
T Consensus 186 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~ 221 (353)
T cd07850 186 PEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD 221 (353)
T ss_pred HHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC
Confidence 996 222222 689999999997654
No 271
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92 E-value=2.9e-24 Score=174.27 Aligned_cols=159 Identities=18% Similarity=0.290 Sum_probs=132.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... .......+.+|+.++..+.||||+++++++...+ ..++|++|+++++|.+++..
T Consensus 40 ~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~-- 109 (285)
T cd06648 40 DKSTGRQVAVKKMDLR----KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD----ELWVVMEFLEGGALTDIVTH-- 109 (285)
T ss_pred ECCCCCEEEEEEEecc----chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC----eEEEEEeccCCCCHHHHHHh--
Confidence 3467889999988632 2334556889999999999999999999887643 58999999999999999876
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....+++.|+||
T Consensus 110 ---~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aP 184 (285)
T cd06648 110 ---TRMNEEQIATVCLAVLKALSFLHA--QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 184 (285)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCH
Confidence 238899999999999999999999 7799999999999999999999999997654 224578899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+.. .++. ++++++|..||...
T Consensus 185 E~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~ 218 (285)
T cd06648 185 EVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE 218 (285)
T ss_pred HHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC
Confidence 9732 2222 79999999999654
No 272
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.92 E-value=4e-24 Score=173.55 Aligned_cols=164 Identities=15% Similarity=0.168 Sum_probs=128.3
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
.+..||+|.+... ........+.+|+.+++.++||||+++++++.... ..|+||||+++++|.+++......
T Consensus 35 ~~~~vavK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~ 107 (288)
T cd05061 35 AETRVAVKTVNES---ASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ----PTLVVMELMAHGDLKSYLRSLRPEA 107 (288)
T ss_pred cceEEEEEECCCc---CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CcEEEEeCCCCCCHHHHHHHhcccc
Confidence 3568999988643 22334456788999999999999999999987654 489999999999999999764311
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcc
Q psy238 84 -----VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYL 148 (218)
Q Consensus 84 -----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~ 148 (218)
...++...+..++.|++.||.|||+ ++|+||||+|+|||++.++.++|+|||++.. ....++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~ 185 (288)
T cd05061 108 ENNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 185 (288)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccc
Confidence 1235677889999999999999999 7799999999999999999999999998763 1123467
Q ss_pred cccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 149 SATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 149 ~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.|+|||.. ..++. ++++++ |..||.....
T Consensus 186 ~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~ 227 (288)
T cd05061 186 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 227 (288)
T ss_pred cccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 79999973 23332 578887 7888876443
No 273
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.92 E-value=2.3e-24 Score=174.81 Aligned_cols=167 Identities=18% Similarity=0.202 Sum_probs=132.1
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|++... ........+.+|+.++..+.||||+++++++.+.. .+++||||+++++|.+++.....
T Consensus 32 ~~~~~~~aiK~~~~~---~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~ 104 (288)
T cd05050 32 YEPFTMVAVKMLKEE---ASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK----PMCLLFEYMAYGDLNEFLRHRSP 104 (288)
T ss_pred CCcceeEEEEecCCC---cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC----ccEEEEecCCCCCHHHHHHHcCc
Confidence 346789999998742 22344567889999999999999999999987643 58999999999999999975321
Q ss_pred ------------------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---
Q psy238 83 ------------------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--- 141 (218)
Q Consensus 83 ------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--- 141 (218)
....+++..++.++.|++.||.|||+ ++++|+||+|+|||++.++.++|+|||++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 182 (288)
T cd05050 105 RAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE--RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 182 (288)
T ss_pred cccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--CCeecccccHhheEecCCCceEECccccceeccc
Confidence 11247888999999999999999999 7799999999999999999999999998764
Q ss_pred -------ccCCCccccccccc--CCCCch----------hhhhhh-CCCCCCcchhh
Q psy238 142 -------IENKKYLSATRQTY--GRPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 142 -------~~~~~t~~y~aPE~--~~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.....+..|+|||+ +..++. +|+|++ |..||.+...+
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 183 ADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred CccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 12234567999996 223322 678887 88898765544
No 274
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=2.5e-24 Score=176.35 Aligned_cols=164 Identities=17% Similarity=0.236 Sum_probs=129.3
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
++..||+|.+... ........+..|+.++..+ +||||+++++++...+ .+|+||||+++++|.+++......
T Consensus 49 ~~~~~aiK~~~~~---~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~~ 121 (307)
T cd05098 49 RVTKVAVKMLKSD---ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPP 121 (307)
T ss_pred ccceEEEEeccCC---CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----ceEEEEecCCCCcHHHHHHhcCCc
Confidence 3457999988742 1234456788899999999 7999999999987654 589999999999999999865321
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------
Q psy238 84 ------------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------- 142 (218)
Q Consensus 84 ------------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------- 142 (218)
...+++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||.+...
T Consensus 122 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~ 199 (307)
T cd05098 122 GMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 199 (307)
T ss_pred ccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHHheEEcCCCcEEECCCcccccccccchhhcc
Confidence 1248889999999999999999999 77999999999999999999999999987641
Q ss_pred -cCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 143 -ENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 143 -~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
...++..|+|||+. ..++. +|++++ |..||.+...
T Consensus 200 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 200 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred ccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 12234679999962 22222 688888 8888876544
No 275
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.92 E-value=2.3e-24 Score=174.12 Aligned_cols=164 Identities=18% Similarity=0.195 Sum_probs=128.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHH-hhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFEN-LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~-l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||.+.... . ......+..|+.+ ++.++||||+++++++...+ .+|+||+|++ ++|.+++...
T Consensus 22 ~~~~~~~vaiK~~~~~~--~-~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~ 93 (283)
T cd06617 22 HVPTGTIMAVKRIRATV--N-SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG----DVWICMEVMD-TSLDKFYKKV 93 (283)
T ss_pred EcCCCcEEEEEEEecCC--C-cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC----cEEEEhhhhc-ccHHHHHHHh
Confidence 45689999999987431 1 1223345556554 56679999999999987644 5899999996 7999988765
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSP-PIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
......+++..++.++.|++.||.|||+ + +++|+||+|+|||++.++.++|+|||++.. ....++..|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~a 171 (283)
T cd06617 94 YDKGLTIPEDILGKIAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMA 171 (283)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccC
Confidence 4333569999999999999999999998 5 699999999999999999999999998764 22467889999
Q ss_pred cccCC------CCch----------hhhhhhCCCCCCcc
Q psy238 153 QTYGR------PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 153 PE~~~------~~~~----------~~ei~tg~~p~~~~ 175 (218)
||+.. .++. ++++++|..||...
T Consensus 172 PE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (283)
T cd06617 172 PERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW 210 (283)
T ss_pred hhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcc
Confidence 99632 1111 79999999999653
No 276
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.92 E-value=4.7e-24 Score=169.97 Aligned_cols=161 Identities=18% Similarity=0.249 Sum_probs=132.1
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
.|+.||||.+... ......+.+|+.++..+.|+||+++++++.+.. ..++||||+++++|.+++.....
T Consensus 28 ~~~~v~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~~~-- 96 (256)
T cd05039 28 RGQKVAVKCLKDD-----STAAQAFLAEASVMTTLRHPNLVQLLGVVLQGN----PLYIVTEYMAKGSLVDYLRSRGR-- 96 (256)
T ss_pred cCcEEEEEEeccc-----hhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCC----CeEEEEEecCCCcHHHHHHhcCC--
Confidence 5788999999743 125677889999999999999999999987633 58999999999999999987542
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccCC--
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYGR-- 157 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~~-- 157 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. .....+..|+|||+..
T Consensus 97 ~~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~ 174 (256)
T cd05039 97 AVITLAQQLGFALDVCEGMEYLEE--KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREK 174 (256)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCC
Confidence 358999999999999999999999 7799999999999999999999999998875 2234466799999632
Q ss_pred CCch----------hhhhhh-CCCCCCcchhh
Q psy238 158 PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 158 ~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.++. ++++++ |..||.....+
T Consensus 175 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 2222 577776 99999766543
No 277
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=3.7e-24 Score=175.90 Aligned_cols=165 Identities=18% Similarity=0.249 Sum_probs=129.9
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR- 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~- 82 (218)
++..||+|.+... ........+..|+.++..+ +||||+++++++.+.+ .+|+||||+++++|.+++.....
T Consensus 43 ~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~i~~~~~~ 115 (314)
T cd05099 43 QTVTVAVKMLKDN---ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG----PLYVIVEYAAKGNLREFLRARRPP 115 (314)
T ss_pred cceEEEEEecCCC---CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC----ceEEEEecCCCCcHHHHHHhcCCC
Confidence 3457999988732 2234456788999999999 6999999999987643 58999999999999999976432
Q ss_pred -----------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------
Q psy238 83 -----------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------- 142 (218)
Q Consensus 83 -----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------- 142 (218)
....+++..+..++.|++.||.|||+ +|++|+||+|+|||++.++.++|+|||++...
T Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 193 (314)
T cd05099 116 GPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES--RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKT 193 (314)
T ss_pred cccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH--CCeeeccccceeEEEcCCCcEEEcccccccccccccccccc
Confidence 11348889999999999999999999 77999999999999999999999999998641
Q ss_pred -cCCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 143 -ENKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 143 -~~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
...++..|+|||+. ..++. ++++++ |..||.....+
T Consensus 194 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 194 SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred ccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 12234579999962 22222 688888 88898765543
No 278
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.92 E-value=3.5e-24 Score=170.38 Aligned_cols=165 Identities=19% Similarity=0.297 Sum_probs=134.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||||.+..... .......+.+|+.+++.++||||+++++.+... ..+++||||+++++|.+++....
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~ 94 (256)
T cd08220 21 RKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFLED----KALMIVMEYAPGGTLAEYIQKRC 94 (256)
T ss_pred EcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEecC----CEEEEEEecCCCCCHHHHHHHhc
Confidence 456789999999975422 234456788999999999999999999988653 36899999999999999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc-------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT-------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~-------~~~~~t~~y~aP 153 (218)
. ..+++..+..++.|++.||.|||+ ++++|+||+|+||+++.+ +.++|+|||++.. ....++..|+||
T Consensus 95 ~--~~~~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aP 170 (256)
T cd08220 95 N--SLLDEDTILHFFVQILLALHHVHT--KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISP 170 (256)
T ss_pred c--cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCc
Confidence 2 458999999999999999999999 779999999999999855 5689999998865 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|... ..+. ++++++|..||....
T Consensus 171 E~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 171 ELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred hhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 9732 2111 689999999997654
No 279
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.92 E-value=3.2e-24 Score=170.46 Aligned_cols=169 Identities=22% Similarity=0.305 Sum_probs=138.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+..|+.+++.++||||+++++++.+. ...++||+|+++++|..++....
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~L~~~~~~~~ 94 (256)
T cd08530 21 RLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDG----NKLCIVMEYAPFGDLSKAISKRK 94 (256)
T ss_pred ECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC----CEEEEEehhcCCCCHHHHHHHHH
Confidence 356789999999875322 234456778899999999999999999888764 36899999999999999988754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCccccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQTY 155 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE~ 155 (218)
.....+++..++.++.|++.||.|||+ .+++|+||+|.||+++.++.++|+|||++.. ....++..|+|||.
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~al~~lh~--~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~ 172 (256)
T cd08530 95 KKRKLIPEQEIWRIFIQLLRGLQALHE--QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEV 172 (256)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHH
Confidence 334568999999999999999999999 7799999999999999999999999998765 23457889999997
Q ss_pred C--CCCch----------hhhhhhCCCCCCcchhh
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
. ..++. ++++++|..||.....+
T Consensus 173 ~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~ 207 (256)
T cd08530 173 WKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ 207 (256)
T ss_pred HCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 3 22222 68999999999766543
No 280
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.92 E-value=1.7e-24 Score=176.29 Aligned_cols=166 Identities=20% Similarity=0.271 Sum_probs=133.0
Q ss_pred CCCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~-~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||.+...... ........+..|+.++..++||||+++++++.+. ..+++||||+ +++|.+++...
T Consensus 21 ~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~-~~~L~~~i~~~ 95 (298)
T cd07841 21 DKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK----SNINLVFEFM-ETDLEKVIKDK 95 (298)
T ss_pred ECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----CEEEEEEccc-CCCHHHHHhcc
Confidence 4567899999999854322 1123455677899999999999999999998773 3689999999 89999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~a 152 (218)
. ..+++..++.++.||+.||.|||+ .+|+|+||+|+|||++.++.++|+|||++... ...++..|+|
T Consensus 96 ~---~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 170 (298)
T cd07841 96 S---IVLTPADIKSYMLMTLRGLEYLHS--NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRA 170 (298)
T ss_pred C---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeC
Confidence 3 258999999999999999999999 77999999999999999999999999988652 2345678999
Q ss_pred cccC---CCCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYG---RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~---~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||.. ..++. ++++++|..||.....
T Consensus 171 PE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~ 208 (298)
T cd07841 171 PELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD 208 (298)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc
Confidence 9963 12222 6889999777765443
No 281
>KOG1151|consensus
Probab=99.92 E-value=1.2e-24 Score=179.15 Aligned_cols=172 Identities=22% Similarity=0.297 Sum_probs=141.4
Q ss_pred CCCCCCcEEEEEEeeccccc---ccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHH
Q psy238 1 MDTEEGVEVVWNEVQFSERK---NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~---~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l 77 (218)
+|....+.||||+-...... ........+.+|..|-+.|.||.||++|++|..... .+|-|+|||+|.+|+.||
T Consensus 483 FDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd---sFCTVLEYceGNDLDFYL 559 (775)
T KOG1151|consen 483 FDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD---SFCTVLEYCEGNDLDFYL 559 (775)
T ss_pred cccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc---cceeeeeecCCCchhHHH
Confidence 57888899999998875322 113355678899999999999999999999876443 489999999999999999
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC---CcEEEeecCcccc-------------
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN---GLVKIGCDTYTHT------------- 141 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~---~~~ki~dfg~~~~------------- 141 (218)
..+.. +++..++.|+.||+.||.||.....+|||-||||.|||+... |.++|+|||++..
T Consensus 560 KQhkl----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGme 635 (775)
T KOG1151|consen 560 KQHKL----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGME 635 (775)
T ss_pred Hhhhh----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccccee
Confidence 98754 999999999999999999999855789999999999999654 8999999999876
Q ss_pred --ccCCCccccccccc---CC-C--Cc----------hhhhhhhCCCCCCcchhhh
Q psy238 142 --IENKKYLSATRQTY---GR-P--IS----------GQYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 142 --~~~~~t~~y~aPE~---~~-~--~~----------~~~ei~tg~~p~~~~~~ee 179 (218)
....||+||++||+ +. | ++ ..|..+.|+.||.......
T Consensus 636 LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ 691 (775)
T KOG1151|consen 636 LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ 691 (775)
T ss_pred eecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH
Confidence 45789999999996 21 1 11 1688899999998665443
No 282
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92 E-value=2.1e-24 Score=175.45 Aligned_cols=170 Identities=19% Similarity=0.226 Sum_probs=132.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||||.+.... ........+.+|+.++..+ +||||+++++++..... +...+|+||+|++ ++|.+++..
T Consensus 22 ~~~~~~~v~lK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~ 98 (295)
T cd07837 22 DKNTGKLVALKKTRLEM--DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDS 98 (295)
T ss_pred ECCCCcEEEEEeehhhc--cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccC-cCHHHHHHH
Confidence 45688999999987532 1122335678899999999 56999999998876443 3345799999997 489998876
Q ss_pred hccc-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc--------ccCCCccc
Q psy238 80 TKRN-VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT--------IENKKYLS 149 (218)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~--------~~~~~t~~ 149 (218)
.... ...+++..++.++.||+.||.|||+ .+|+|+||+|+||+++. ++.++|+|||++.. ....+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 176 (295)
T cd07837 99 NGRGPGRPLPAKTIKSFMYQLLKGVAHCHK--HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLW 176 (295)
T ss_pred hcccCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccC
Confidence 5432 3468999999999999999999999 77999999999999998 89999999998764 22345788
Q ss_pred ccccccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 150 ATRQTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 150 y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+|||+.. ..+. ++++++|..||.+..
T Consensus 177 ~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~ 216 (295)
T cd07837 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS 216 (295)
T ss_pred CCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999632 2222 789999999997654
No 283
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.92 E-value=5.5e-24 Score=170.68 Aligned_cols=159 Identities=18% Similarity=0.241 Sum_probs=128.0
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||+|.+... ........+..|+.++..+.||||+++++++.+.+ ..++||||+++++|.+++.... ..
T Consensus 34 ~~~~ik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~---~~ 103 (268)
T cd05063 34 VAVAIKTLKPG---YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK----PAMIITEYMENGALDKYLRDHD---GE 103 (268)
T ss_pred eEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC----CcEEEEEcCCCCCHHHHHHhcC---CC
Confidence 37999988642 12344567889999999999999999999987654 4899999999999999997643 35
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccccc-----------CCCccccccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIE-----------NKKYLSATRQTY 155 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~-----------~~~t~~y~aPE~ 155 (218)
+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.... ...+..|+|||+
T Consensus 104 ~~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 181 (268)
T cd05063 104 FSSYQLVGMLRGIAAGMKYLSD--MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA 181 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHH
Confidence 8999999999999999999999 779999999999999999999999999886421 122346999997
Q ss_pred CC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 156 GR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 156 ~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.. .++. +|++++ |..||.....
T Consensus 182 ~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~ 216 (268)
T cd05063 182 IAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN 216 (268)
T ss_pred hhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence 22 2222 688887 9999976543
No 284
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.92 E-value=2.8e-24 Score=171.76 Aligned_cols=160 Identities=23% Similarity=0.249 Sum_probs=129.4
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||+|.+.... .....+.+|+.+++.++||||+++++++... .+++||+|+++++|.+++....+
T Consensus 28 ~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~e~~~~~~L~~~~~~~~~- 96 (260)
T cd05067 28 NGHTKVAIKSLKQGS-----MSPEAFLAEANLMKQLQHPRLVRLYAVVTQE-----PIYIITEYMENGSLVDFLKTPEG- 96 (260)
T ss_pred CCCceEEEEEecCCC-----CcHHHHHHHHHHHHhcCCcCeeeEEEEEccC-----CcEEEEEcCCCCCHHHHHHhcCC-
Confidence 357889999887432 1235688899999999999999999887432 48999999999999999876532
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQT 154 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE 154 (218)
..++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|||
T Consensus 97 -~~~~~~~~~~i~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe 173 (260)
T cd05067 97 -IKLTINKLIDMAAQIAEGMAFIER--KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 173 (260)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHhc--CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHH
Confidence 458899999999999999999999 67999999999999999999999999988641 223456899999
Q ss_pred cC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 155 YG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
+. ...+. ++++++ |..||.+...
T Consensus 174 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 174 AINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred HhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 63 22222 688998 9999976554
No 285
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.92 E-value=4.3e-24 Score=172.38 Aligned_cols=161 Identities=19% Similarity=0.228 Sum_probs=133.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++... ........+.+|+.++..++||||+++++++.... .+|+||||+++++|..++..
T Consensus 25 ~~~~~~~~aiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~l~~~i~~-- 95 (277)
T cd06641 25 DNRTQKVVAIKIIDLE---EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT----KLWIIMEYLGGGSALDLLEP-- 95 (277)
T ss_pred ECCCCcEEEEEEeccc---cchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC----eEEEEEEeCCCCcHHHHHhc--
Confidence 4567899999988643 22345567889999999999999999999987644 58999999999999999864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 96 ---~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P 170 (277)
T cd06641 96 ---GPLDETQIATILREILKGLDYLHS--EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHcc--CCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccCh
Confidence 248899999999999999999999 7799999999999999999999999998754 234578899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|... .++. ++++++|..||....
T Consensus 171 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 205 (277)
T cd06641 171 EVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH 205 (277)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc
Confidence 9732 2221 789999999997544
No 286
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.92 E-value=1.6e-24 Score=177.70 Aligned_cols=168 Identities=19% Similarity=0.228 Sum_probs=132.7
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
+|..||||.+..... ........+.+|+.++..++||||+++++++.+.. ...+++||||+. ++|.+++.......
T Consensus 26 ~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~ 101 (316)
T cd07842 26 DGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHA--DKSVYLLFDYAE-HDLWQIIKFHRQAK 101 (316)
T ss_pred CCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC--CceEEEEEeCCC-cCHHHHHHhhccCC
Confidence 789999999985321 11233456788999999999999999999997752 246999999996 58888776544322
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec----CCcEEEeecCcccc-----------ccCCCcc
Q psy238 85 -KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH----NGLVKIGCDTYTHT-----------IENKKYL 148 (218)
Q Consensus 85 -~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~----~~~~ki~dfg~~~~-----------~~~~~t~ 148 (218)
..+++..++.++.|++.||.|||+ .+|+|+||+|+|||++. ++.++|+|||++.. ....++.
T Consensus 102 ~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 179 (316)
T cd07842 102 RVSIPPSMVKSLLWQILNGVHYLHS--NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTI 179 (316)
T ss_pred CcCcCHHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccc
Confidence 368999999999999999999999 77999999999999999 89999999998764 1235678
Q ss_pred cccccccC--C-CCch----------hhhhhhCCCCCCcchhh
Q psy238 149 SATRQTYG--R-PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 149 ~y~aPE~~--~-~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
.|+|||+. . .++. ++++++|..||.....+
T Consensus 180 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 222 (316)
T cd07842 180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK 222 (316)
T ss_pred cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence 89999962 1 2222 68999999999766543
No 287
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.92 E-value=6e-24 Score=170.62 Aligned_cols=160 Identities=18% Similarity=0.274 Sum_probs=128.1
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||||.+... ........+..|+.++..+.||||+++++++.... .+++||||+++++|.+++.... ..
T Consensus 33 ~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~---~~ 102 (269)
T cd05065 33 IFVAIKTLKSG---YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR----PVMIITEFMENGALDSFLRQND---GQ 102 (269)
T ss_pred eeEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC----ceEEEEecCCCCcHHHHHhhCC---CC
Confidence 46999988642 22445677899999999999999999999986644 5899999999999999987643 34
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccccc-----------C--CCccccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIE-----------N--KKYLSATRQ 153 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~-----------~--~~t~~y~aP 153 (218)
+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.... . ..+..|+||
T Consensus 103 ~~~~~~~~i~~~l~~al~~lH~--~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~P 180 (269)
T cd05065 103 FTVIQLVGMLRGIAAGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP 180 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH--CCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCH
Confidence 8899999999999999999999 779999999999999999999999999875411 0 113479999
Q ss_pred ccCC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 154 TYGR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
|+.. .++. ++++++ |..||......
T Consensus 181 E~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~ 218 (269)
T cd05065 181 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 218 (269)
T ss_pred hHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH
Confidence 9732 2221 688786 99999765543
No 288
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.92 E-value=4.7e-24 Score=174.74 Aligned_cols=163 Identities=20% Similarity=0.254 Sum_probs=132.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|.+..... ........+.+|+.++..++||||+++++++.+.. ..|+||||+. ++|.+++....
T Consensus 37 ~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~-g~l~~~~~~~~- 109 (307)
T cd06607 37 VRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH----TAWLVMEYCL-GSASDILEVHK- 109 (307)
T ss_pred cCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC----eEEEEHHhhC-CCHHHHHHHcc-
Confidence 45789999999874322 22345567889999999999999999999998754 4899999996 68888776543
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccCC-
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYGR- 157 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~~- 157 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+|||+..
T Consensus 110 --~~l~~~~~~~~~~ql~~~L~~LH~--~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~ 185 (307)
T cd06607 110 --KPLQEVEIAAICHGALQGLAYLHS--HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILA 185 (307)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeec
Confidence 348999999999999999999999 6799999999999999999999999998865 3456788999999631
Q ss_pred ----CCch----------hhhhhhCCCCCCcch
Q psy238 158 ----PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 158 ----~~~~----------~~ei~tg~~p~~~~~ 176 (218)
.++. ++++++|..||....
T Consensus 186 ~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred cCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 1221 689999999997544
No 289
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.92 E-value=4.6e-24 Score=169.71 Aligned_cols=159 Identities=20% Similarity=0.212 Sum_probs=132.4
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||+|.+... .....+.+|+.+++.++||||+++++++... ..+|+++||+++++|.+++....
T Consensus 26 ~~~~~~~~k~~~~~------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~l~~e~~~~~~L~~~l~~~~-- 93 (256)
T cd06612 26 ETGQVVAIKVVPVE------EDLQEIIKEISILKQCDSPYIVKYYGSYFKN----TDLWIVMEYCGAGSVSDIMKITN-- 93 (256)
T ss_pred CCCcEEEEEEeecH------HHHHHHHHHHHHHHhCCCCcEeeeeeeeecC----CcEEEEEecCCCCcHHHHHHhCc--
Confidence 45789999998742 1267888999999999999999999998765 36899999999999999987543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQTY 155 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE~ 155 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|.||+++.++.++|+|||++.. ....++..|+|||+
T Consensus 94 -~~l~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~ 170 (256)
T cd06612 94 -KTLTEEEIAAILYQTLKGLEYLHS--NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170 (256)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHH
Confidence 358999999999999999999999 6699999999999999999999999998765 12346789999997
Q ss_pred C--CCCch----------hhhhhhCCCCCCcchh
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
. ..++. ++++++|..||.....
T Consensus 171 ~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~ 204 (256)
T cd06612 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP 204 (256)
T ss_pred HhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch
Confidence 2 22222 6889999999976443
No 290
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.92 E-value=4e-24 Score=170.78 Aligned_cols=162 Identities=23% Similarity=0.340 Sum_probs=134.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... ......+..|+.+++.++|+||+++++++.... .+++|+||+++++|.+++...
T Consensus 21 ~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 93 (264)
T cd06626 21 NLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE----KVYIFMEYCSGGTLEELLEHG- 93 (264)
T ss_pred ECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCC----EEEEEEecCCCCcHHHHHhhc-
Confidence 3457899999999854222 456778999999999999999999999876543 589999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc------------cCCCccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------ENKKYLS 149 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------~~~~t~~ 149 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..
T Consensus 94 ---~~~~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T cd06626 94 ---RILDEHVIRVYTLQLLEGLAYLHS--HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPA 168 (264)
T ss_pred ---CCCChHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcC
Confidence 347889999999999999999999 77999999999999999999999999987651 2456789
Q ss_pred ccccccCCCCc-----h----------hhhhhhCCCCCCcc
Q psy238 150 ATRQTYGRPIS-----G----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 150 y~aPE~~~~~~-----~----------~~ei~tg~~p~~~~ 175 (218)
|+|||+..... . ++++++|..||...
T Consensus 169 ~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 169 YMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred ccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 99999733211 1 69999999999754
No 291
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.92 E-value=5.7e-24 Score=171.73 Aligned_cols=159 Identities=17% Similarity=0.254 Sum_probs=129.3
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.||+|.+... ........+.+|+.+++.+.||||+++++++.. ...++||+|+++++|.+++.... ..+
T Consensus 38 ~~aik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~v~e~~~~g~L~~~l~~~~---~~~ 106 (279)
T cd05057 38 PVAIKVLREE---TSPKANKEILDEAYVMASVDHPHVVRLLGICLS-----SQVQLITQLMPLGCLLDYVRNHK---DNI 106 (279)
T ss_pred EEEEEeccCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CceEEEEecCCCCcHHHHHHhcc---CCC
Confidence 5899987642 224556778899999999999999999999876 24899999999999999997643 348
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccccccccCC
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSATRQTYGR 157 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y~aPE~~~ 157 (218)
++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+|||...
T Consensus 107 ~~~~~~~~~~qi~~~l~~LH~--~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 184 (279)
T cd05057 107 GSQYLLNWCVQIAKGMSYLEE--KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL 184 (279)
T ss_pred CHHHHHHHHHHHHHHHHHHHh--CCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhh
Confidence 999999999999999999999 77999999999999999999999999988641 112246799999632
Q ss_pred --CCch----------hhhhhh-CCCCCCcchhhh
Q psy238 158 --PISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 158 --~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
.++. ++++++ |..||.+...++
T Consensus 185 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 219 (279)
T cd05057 185 HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE 219 (279)
T ss_pred cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence 2221 688888 999998765443
No 292
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.92 E-value=1.1e-24 Score=176.11 Aligned_cols=162 Identities=20% Similarity=0.240 Sum_probs=131.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|.+.... ........+.+|+.+++.++||||+++++++.... .+|+||||+++++|..+....
T Consensus 23 ~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~-- 94 (286)
T cd07846 23 KETGQIVAIKKFLESE--DDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK----RLYLVFEFVDHTVLDDLEKYP-- 94 (286)
T ss_pred CCCCCEEEEEeHhhcc--CcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC----eEEEEEecCCccHHHHHHhcc--
Confidence 4578999999887432 22234567888999999999999999999986543 689999999988888776543
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|||
T Consensus 95 --~~~~~~~~~~~~~~i~~~l~~LH~--~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 170 (286)
T cd07846 95 --NGLDESRVRKYLFQILRGIEFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPE 170 (286)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcH
Confidence 238999999999999999999999 7799999999999999999999999998764 1235678899999
Q ss_pred cCC--C-Cch----------hhhhhhCCCCCCcch
Q psy238 155 YGR--P-ISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~--~-~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.. . .+. ++++++|..||....
T Consensus 171 ~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~ 205 (286)
T cd07846 171 LLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS 205 (286)
T ss_pred HhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc
Confidence 732 1 111 689999999996543
No 293
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.92 E-value=7.6e-24 Score=172.73 Aligned_cols=161 Identities=16% Similarity=0.209 Sum_probs=126.7
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc----
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR---- 82 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---- 82 (218)
.+|+|.+.. .......+.+.+|+.++.++ +||||+++++++...+ .+|+||+|+++++|.+++.....
T Consensus 31 ~~~ik~~~~---~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~ 103 (297)
T cd05089 31 NAAIKMLKE---FASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG----YLYIAIEYAPYGNLLDFLRKSRVLETD 103 (297)
T ss_pred eeEEEEccc---cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC----cceEEEEecCCCcHHHHHHhccccccc
Confidence 468887762 12234456788999999999 7999999999986643 58999999999999999976421
Q ss_pred --------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCc
Q psy238 83 --------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKY 147 (218)
Q Consensus 83 --------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t 147 (218)
....+++..++.++.|++.||.|||+ ++|+|+||+|+|||++.++.++|+|||++.. .....+
T Consensus 104 ~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 181 (297)
T cd05089 104 PAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE--KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLP 181 (297)
T ss_pred cccccccCccCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcC
Confidence 11348899999999999999999999 7799999999999999999999999998753 112335
Q ss_pred ccccccccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 148 LSATRQTYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 148 ~~y~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
..|+|||+.. .++. +++|+| |..||.....
T Consensus 182 ~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~ 224 (297)
T cd05089 182 VRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC 224 (297)
T ss_pred ccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 5799999732 2222 688987 9999976544
No 294
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.92 E-value=3.2e-24 Score=171.52 Aligned_cols=162 Identities=20% Similarity=0.246 Sum_probs=135.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... ........+.+|+.+++.+.||||+++++++.... .+++|++|+++++|.+++....
T Consensus 22 ~~~~~~~~~ik~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~ 94 (265)
T cd06605 22 HRPTGKIMAVKTIRLE---INEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG----DISICMEYMDGGSLDKILKEVQ 94 (265)
T ss_pred EcCCCcEEEEEEEecc---cChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC----EEEEEEEecCCCcHHHHHHHcc
Confidence 3457899999998753 22355677889999999999999999999987653 6899999999899999998653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~t~~y~aPE 154 (218)
..+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+.. ....++..|+|||
T Consensus 95 ---~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE 169 (265)
T cd06605 95 ---GRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPE 169 (265)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHH
Confidence 458999999999999999999999 66 99999999999999999999999998764 2366788999999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcc
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~ 175 (218)
+. ..++. ++++++|..||...
T Consensus 170 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 170 RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 72 22222 68899999999765
No 295
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.92 E-value=5.3e-24 Score=171.06 Aligned_cols=159 Identities=21% Similarity=0.296 Sum_probs=128.1
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||||.+... ......+.+.+|+.+++.+.||||+++++++.+. ..|+||||+++++|.+++.... ..
T Consensus 35 ~~v~ik~~~~~---~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~---~~ 103 (270)
T cd05056 35 IAVAVKTCKNC---TSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-----PVWIVMELAPLGELRSYLQVNK---YS 103 (270)
T ss_pred cceEEEecCCc---CCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-----CcEEEEEcCCCCcHHHHHHhCC---CC
Confidence 46899988742 2244567889999999999999999999988653 3689999999999999997643 34
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccccC-
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTYG- 156 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~~- 156 (218)
+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+|||..
T Consensus 104 ~~~~~~~~~~~~l~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 181 (270)
T cd05056 104 LDLASLILYSYQLSTALAYLES--KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESIN 181 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHh--CCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhc
Confidence 8999999999999999999999 67999999999999999999999999987641 22234679999962
Q ss_pred -CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 157 -RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 157 -~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
..++. ++++++ |..||......
T Consensus 182 ~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~ 215 (270)
T cd05056 182 FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN 215 (270)
T ss_pred cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 22222 578775 99999766543
No 296
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.92 E-value=2.6e-24 Score=175.28 Aligned_cols=159 Identities=21% Similarity=0.291 Sum_probs=131.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+... .......+.+|+.++..++||||+++++++.... ..|+|+||+++++|.+++...
T Consensus 40 ~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 110 (293)
T cd06647 40 DVATGQEVAIKQMNLQ----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGD----ELWVVMEYLAGGSLTDVVTET- 110 (293)
T ss_pred EcCCCCEEEEEEeccc----cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC----cEEEEEecCCCCcHHHHHhhc-
Confidence 4567889999998632 1233467888999999999999999999987654 589999999999999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....+++.|+||
T Consensus 111 ----~l~~~~~~~i~~~l~~al~~LH~--~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~P 184 (293)
T cd06647 111 ----CMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184 (293)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHh--CCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCc
Confidence 37889999999999999999999 7799999999999999999999999998754 234577889999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcc
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
|+.. .++. ++++++|..||...
T Consensus 185 E~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~ 218 (293)
T cd06647 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (293)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9722 2222 68999999999754
No 297
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.92 E-value=3.4e-24 Score=175.65 Aligned_cols=168 Identities=21% Similarity=0.264 Sum_probs=132.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... ......+.+|+.++..++|+||+++++++.... ...+++||||+. ++|.+++....
T Consensus 28 ~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~l~~~~ 102 (309)
T cd07845 28 DTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKH--LDSIFLVMEYCE-QDLASLLDNMP 102 (309)
T ss_pred ECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCC--CCeEEEEEecCC-CCHHHHHHhcc
Confidence 4568999999999754221 122234567999999999999999999987532 235899999996 58998887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+||
T Consensus 103 ---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP 177 (309)
T cd07845 103 ---TPFSESQVKCLMLQLLRGLQYLHE--NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAP 177 (309)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccCh
Confidence 458999999999999999999999 77999999999999999999999999988652 22346789999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchhhh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
|+.. .++. ++++++|..||......+
T Consensus 178 E~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~ 216 (309)
T cd07845 178 ELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE 216 (309)
T ss_pred hhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9732 1222 699999999997665443
No 298
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.92 E-value=9.2e-24 Score=172.08 Aligned_cols=166 Identities=22% Similarity=0.285 Sum_probs=130.0
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
++..||+|++... ........+.+|+.++..++||||+++++++...+ .+++||||+++++|.+++......
T Consensus 45 ~~~~~a~K~~~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~ 117 (296)
T cd05095 45 QPVLVAVKMLRED---ANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSD----PLCMITEYMENGDLNQFLSRHEPQE 117 (296)
T ss_pred ceeEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----ccEEEEEeCCCCcHHHHHHhcCccc
Confidence 3457999998742 22445668889999999999999999999987654 489999999999999999864321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCc
Q psy238 84 ------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKY 147 (218)
Q Consensus 84 ------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t 147 (218)
...+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 195 (296)
T cd05095 118 AAEKADVVTISYSTLIFMATQIASGMKYLSS--LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLP 195 (296)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHH--CCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCc
Confidence 1237788999999999999999999 66999999999999999999999999988641 12235
Q ss_pred cccccccc--CCCCch----------hhhhhh--CCCCCCcchhhh
Q psy238 148 LSATRQTY--GRPISG----------QYEIVT--KTNNVTEKKKEK 179 (218)
Q Consensus 148 ~~y~aPE~--~~~~~~----------~~ei~t--g~~p~~~~~~ee 179 (218)
..|+|||+ +..++. +|++++ |..||......+
T Consensus 196 ~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 196 IRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred cccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 67999995 223332 688887 778887654433
No 299
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92 E-value=1.8e-24 Score=179.43 Aligned_cols=164 Identities=17% Similarity=0.190 Sum_probs=131.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|..+|..||||.+... ........+..|+.+++.++||||+++++++..... ....+|+|++|+. ++|..++..
T Consensus 26 ~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~- 100 (336)
T cd07849 26 HKPTGVKVAIKKISPF---EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT- 100 (336)
T ss_pred EcCCCCeEEEEEeccc---ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc-
Confidence 5678999999998632 223445667889999999999999999988765432 2346899999996 588887754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~ 149 (218)
..+++..++.++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++... ...++..
T Consensus 101 ----~~l~~~~~~~i~~ql~~aL~~LH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 174 (336)
T cd07849 101 ----QHLSNDHIQYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRW 174 (336)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCC
Confidence 348999999999999999999999 77999999999999999999999999987641 2356888
Q ss_pred ccccccC---CCCch----------hhhhhhCCCCCCcch
Q psy238 150 ATRQTYG---RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 150 y~aPE~~---~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+|||.. ..++. ++++++|+.||.+..
T Consensus 175 y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~ 214 (336)
T cd07849 175 YRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD 214 (336)
T ss_pred ccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999962 12222 689999999997643
No 300
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.92 E-value=4.7e-24 Score=171.42 Aligned_cols=163 Identities=20% Similarity=0.300 Sum_probs=132.1
Q ss_pred CCCCCcEEEEEEeecccccc------cHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKN------FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~------~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~ 75 (218)
+..+|..||||.+....... .....+.+..|+.++..++||||+++++++.... .+++||||+++++|.+
T Consensus 22 ~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~ 97 (272)
T cd06629 22 NVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE----YLSIFLEYVPGGSIGS 97 (272)
T ss_pred ecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC----ceEEEEecCCCCcHHH
Confidence 45688999999886421111 1123456788999999999999999999886643 5899999999999999
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCC
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENK 145 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~ 145 (218)
++... ..++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...
T Consensus 98 ~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 171 (272)
T cd06629 98 CLRTY----GRFEEQLVRFFTEQVLEGLAYLHS--KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ 171 (272)
T ss_pred HHhhc----cCCCHHHHHHHHHHHHHHHHHHhh--CCeeecCCChhhEEEcCCCeEEEeecccccccccccccccccccc
Confidence 99765 348999999999999999999999 77999999999999999999999999988641 235
Q ss_pred CcccccccccCC--C--Cch----------hhhhhhCCCCCCc
Q psy238 146 KYLSATRQTYGR--P--ISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 146 ~t~~y~aPE~~~--~--~~~----------~~ei~tg~~p~~~ 174 (218)
++..|+|||+.. . ++. ++++++|..||..
T Consensus 172 ~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred CCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 788999999622 1 221 6899999999964
No 301
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92 E-value=3.1e-24 Score=174.85 Aligned_cols=159 Identities=17% Similarity=0.253 Sum_probs=131.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||||.+... .......+.+|+.+++.++||||+++++++.... ..++||||+++++|.+++..
T Consensus 42 ~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~--- 110 (292)
T cd06657 42 KSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVVMEFLEGGALTDIVTH--- 110 (292)
T ss_pred cCCCeEEEEEEeccc----chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC----EEEEEEecCCCCcHHHHHhc---
Confidence 467899999988632 2345567889999999999999999999987644 68999999999999998754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
..+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++.. ....+++.|+|||
T Consensus 111 --~~~~~~~~~~~~~ql~~~l~~lH~--~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE 186 (292)
T cd06657 111 --TRMNEEQIAAVCLAVLKALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 186 (292)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHH
Confidence 248899999999999999999999 7799999999999999999999999998754 2245788899999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcch
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.. .++. ++++++|..||....
T Consensus 187 ~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~ 220 (292)
T cd06657 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 220 (292)
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 732 2222 689999999997543
No 302
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.92 E-value=5.9e-24 Score=173.71 Aligned_cols=168 Identities=17% Similarity=0.205 Sum_probs=131.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC----CCCeEEEEEeccCCCCHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN----DKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~----~~~~~~lv~e~~~~~sL~~~l 77 (218)
+..+|..||||.+..... .......+.+|+.+++.+.||||+++++++..... .....++||||+. ++|.+++
T Consensus 33 ~~~~~~~~aik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l 109 (310)
T cd07865 33 HKKTKQIVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLL 109 (310)
T ss_pred ECCCCcEEEEEEEeccCC--cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHH
Confidence 356889999999874321 12233455689999999999999999998866432 2346799999995 6898888
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc------------cCC
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------ENK 145 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------~~~ 145 (218)
.... ..+++..++.++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++... ...
T Consensus 110 ~~~~---~~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 184 (310)
T cd07865 110 SNKN---VKFTLSEIKKVMKMLLNGLYYIHR--NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRV 184 (310)
T ss_pred Hhcc---cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcc
Confidence 6543 348999999999999999999999 77999999999999999999999999988641 234
Q ss_pred CcccccccccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 146 KYLSATRQTYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 146 ~t~~y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
++..|+|||+.. ..+. ++++++|..||.+...
T Consensus 185 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~ 229 (310)
T cd07865 185 VTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE 229 (310)
T ss_pred cCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 577899999632 1112 7999999999976543
No 303
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.92 E-value=4.5e-24 Score=173.50 Aligned_cols=166 Identities=21% Similarity=0.259 Sum_probs=133.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... ......+.+|+.++..++||||+++++++.... ...+|+||||+. ++|.+++....
T Consensus 26 ~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~~~lv~e~~~-~~L~~~~~~~~ 100 (293)
T cd07843 26 DKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSN--LDKIYMVMEYVE-HDLKSLMETMK 100 (293)
T ss_pred ECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC--CCcEEEEehhcC-cCHHHHHHhcc
Confidence 3457889999999754222 233345678999999999999999999887642 246999999996 59999887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++..|+||
T Consensus 101 ---~~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aP 175 (293)
T cd07843 101 ---QPFLQSEVKCLMLQLLSGVAHLHD--NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAP 175 (293)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCc
Confidence 258999999999999999999999 6799999999999999999999999998775 223467889999
Q ss_pred ccC--CC-Cch----------hhhhhhCCCCCCcchh
Q psy238 154 TYG--RP-ISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~--~~-~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+. .. .+. ++++++|..||.+...
T Consensus 176 E~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~ 212 (293)
T cd07843 176 ELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE 212 (293)
T ss_pred hhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 962 21 122 6899999999986554
No 304
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.92 E-value=4.9e-24 Score=174.37 Aligned_cols=157 Identities=15% Similarity=0.239 Sum_probs=126.0
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.||+|.+... ........+.+|+.++..+.||||+++++++... ..+++++|+++|+|.+++.... ..+
T Consensus 38 ~vaiK~~~~~---~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~v~e~~~~g~l~~~~~~~~---~~~ 106 (303)
T cd05110 38 PVAIKILNET---TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-----TIQLVTQLMPHGCLLDYVHEHK---DNI 106 (303)
T ss_pred eEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----CceeeehhcCCCCHHHHHHhcc---cCC
Confidence 5788888642 2234445688899999999999999999998653 2679999999999999987643 348
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccccC-
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTYG- 156 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~~- 156 (218)
++..++.++.|++.||.|||+ ++|+|+||+|+|||++.++.++|+|||++.. ....++..|+|||+.
T Consensus 107 ~~~~~~~~~~qi~~~L~~LH~--~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 184 (303)
T cd05110 107 GSQLLLNWCVQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 184 (303)
T ss_pred CHHHHHHHHHHHHHHHHHHhh--cCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhc
Confidence 899999999999999999999 7799999999999999999999999998864 122346689999962
Q ss_pred -CCCch----------hhhhhh-CCCCCCcchh
Q psy238 157 -RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 157 -~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
..++. ++++++ |..||.+...
T Consensus 185 ~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~ 217 (303)
T cd05110 185 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 217 (303)
T ss_pred cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 33332 688887 8999976543
No 305
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=6.3e-24 Score=169.58 Aligned_cols=160 Identities=25% Similarity=0.276 Sum_probs=129.4
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..||||.+.... .....+.+|+.+++.++||||+++++++.... .+++||+|+++++|.+++.....
T Consensus 29 ~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~i~~~~~-- 97 (261)
T cd05034 29 GTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE----PIYIVTEYMSKGSLLDFLKSGEG-- 97 (261)
T ss_pred CCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC----ceEEEEeccCCCCHHHHHhcccc--
Confidence 45679999887432 22356888999999999999999999886543 48999999999999999976532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ....+..|+|||.
T Consensus 98 ~~~~~~~~~~~~~~i~~al~~lh~--~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~ 175 (261)
T cd05034 98 KKLRLPQLVDMAAQIAEGMAYLES--RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHH
Confidence 358999999999999999999999 77999999999999999999999999987642 2234567999997
Q ss_pred C--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 156 G--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 156 ~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
. ...+. ++++++ |+.||.+...
T Consensus 176 ~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 176 ANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred hccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 3 22232 678888 9999976543
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.92 E-value=2.2e-24 Score=174.47 Aligned_cols=163 Identities=19% Similarity=0.234 Sum_probs=130.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||.+.... ........+.+|+++++.+.||||+++++++...+ .+++||||++++.+..++...
T Consensus 22 ~~~~~~~v~vK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~iv~e~~~~~~l~~~~~~~- 94 (288)
T cd07833 22 NKATGEIVAIKKFKESE--DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG----RLYLVFEYVERTLLELLEASP- 94 (288)
T ss_pred eCCCCcEEEEehhhhhc--ccccchhHHHHHHHHHHhcCCCCeeehhheEEECC----EEEEEEecCCCCHHHHHHhcC-
Confidence 45678999999887432 22345577889999999999999999999987643 589999999875565554432
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
..++...++.++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|
T Consensus 95 ---~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (288)
T cd07833 95 ---GGLPPDAVRSYIWQLLQAIAYCHS--HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRA 169 (288)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcC
Confidence 348999999999999999999999 7799999999999999999999999998765 12345788999
Q ss_pred cccCCCC---ch----------hhhhhhCCCCCCcch
Q psy238 153 QTYGRPI---SG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~~~~---~~----------~~ei~tg~~p~~~~~ 176 (218)
||+.... +. ++++++|..||.+..
T Consensus 170 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~ 206 (288)
T cd07833 170 PELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDS 206 (288)
T ss_pred CchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9973222 11 689999999997654
No 307
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.92 E-value=1.6e-24 Score=186.49 Aligned_cols=153 Identities=15% Similarity=0.171 Sum_probs=124.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..++..||||.... ..+.+|+.+|+.++||||+++++++...+ ..|+||+++. ++|..++....
T Consensus 190 ~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~----~~~lv~e~~~-~~L~~~l~~~~ 254 (461)
T PHA03211 190 HPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVGG----LTCLVLPKYR-SDLYTYLGARL 254 (461)
T ss_pred ECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEECC----EEEEEEEccC-CCHHHHHHhcC
Confidence 445678899995431 23467999999999999999999987643 5899999994 79998887543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSAT 151 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~ 151 (218)
..+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++.. ....||..|+
T Consensus 255 ---~~l~~~~~~~i~~qi~~aL~yLH~--~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~ 329 (461)
T PHA03211 255 ---RPLGLAQVTAVARQLLSAIDYIHG--EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTN 329 (461)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCc
Confidence 358999999999999999999999 7799999999999999999999999998764 1346899999
Q ss_pred ccccC--CCCch----------hhhhhhCCCCCCc
Q psy238 152 RQTYG--RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 152 aPE~~--~~~~~----------~~ei~tg~~p~~~ 174 (218)
|||+. ..++. +|++++|..|+..
T Consensus 330 APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 330 APEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred CHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 99973 33333 6888888776643
No 308
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.92 E-value=9e-24 Score=172.06 Aligned_cols=164 Identities=20% Similarity=0.266 Sum_probs=127.9
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc----
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR---- 82 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---- 82 (218)
..||+|.+... ........+.+|++++..++||||+++++++.... .+++||||+++++|.+++.....
T Consensus 45 ~~vavK~~~~~---~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~ 117 (295)
T cd05097 45 VLVAVKMLRAD---VTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD----PLCMITEYMENGDLNQFLSQREIESTF 117 (295)
T ss_pred eEEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC----ccEEEEecCCCCcHHHHHHhccccccc
Confidence 35899988742 22445567889999999999999999999987644 58999999999999999865421
Q ss_pred ----cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcc
Q psy238 83 ----NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYL 148 (218)
Q Consensus 83 ----~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~ 148 (218)
....+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++.
T Consensus 118 ~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 195 (295)
T cd05097 118 THANNIPSVSIANLLYMAVQIASGMKYLAS--LNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPI 195 (295)
T ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHHh--cCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCce
Confidence 11236888999999999999999999 77999999999999999999999999987641 123367
Q ss_pred cccccccC--CCCch----------hhhhhh--CCCCCCcchhhh
Q psy238 149 SATRQTYG--RPISG----------QYEIVT--KTNNVTEKKKEK 179 (218)
Q Consensus 149 ~y~aPE~~--~~~~~----------~~ei~t--g~~p~~~~~~ee 179 (218)
.|+|||+. ..++. ++++++ |..||.....++
T Consensus 196 ~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 196 RWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred eecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 89999962 22222 678877 667777655433
No 309
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=6.5e-24 Score=175.95 Aligned_cols=164 Identities=17% Similarity=0.242 Sum_probs=129.2
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc---
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR--- 82 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--- 82 (218)
..||+|.+... ........+.+|+.++..+ .||||+++++++...+ .++++|+|+++++|.+++.....
T Consensus 45 ~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~ 117 (334)
T cd05100 45 VTVAVKMLKDD---ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG----PLYVLVEYASKGNLREYLRARRPPGM 117 (334)
T ss_pred eeEEEEEcccc---cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC----ceEEEEecCCCCcHHHHHHhcCCccc
Confidence 47899988632 2234556788999999999 8999999999987644 58999999999999999976421
Q ss_pred ---------cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------cc
Q psy238 83 ---------NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IE 143 (218)
Q Consensus 83 ---------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~ 143 (218)
....+++..+..++.|++.||.|||+ ++++||||+|+|||++.++.++|+|||++.. ..
T Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 195 (334)
T cd05100 118 DYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS--QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTN 195 (334)
T ss_pred ccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccccceEEEcCCCcEEECCcccceecccccccccccC
Confidence 11347888899999999999999999 7799999999999999999999999998764 11
Q ss_pred CCCcccccccccC--CCCch----------hhhhhh-CCCCCCcchhhh
Q psy238 144 NKKYLSATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKEK 179 (218)
Q Consensus 144 ~~~t~~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ee 179 (218)
..++..|+|||+. ..++. +++|++ |..||.+...++
T Consensus 196 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 196 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred CCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 2334679999963 22222 688888 888887654433
No 310
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.92 E-value=4.7e-24 Score=173.48 Aligned_cols=165 Identities=16% Similarity=0.203 Sum_probs=129.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+.+|+.+++.++||||+++++++.+.. ..|+||||++ ++|.+++....
T Consensus 23 ~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 95 (294)
T PLN00009 23 DRVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----RLYLVFEYLD-LDLKKHMDSSP 95 (294)
T ss_pred ecCCCcEEEEEehhhccc--cccchHHHHHHHHHHHhccCCCEeeEEEEEecCC----eEEEEEeccc-ccHHHHHHhCC
Confidence 456889999999875321 1234456788999999999999999999987643 6899999995 68888876543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc--------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. ..+++..++.++.||+.||.|||+ ++++|+||+|+||+++. ++.++|+|||++.. ....+++.|+|
T Consensus 96 ~--~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~ 171 (294)
T PLN00009 96 D--FAKNPRLIKTYLYQILRGIAYCHS--HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRA 171 (294)
T ss_pred C--CCcCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccC
Confidence 2 346788999999999999999999 77999999999999985 56799999998864 22345788999
Q ss_pred cccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||+.. .++. +++++||..||.....
T Consensus 172 PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~ 209 (294)
T PLN00009 172 PEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE 209 (294)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99621 2222 6899999999976543
No 311
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92 E-value=4.7e-24 Score=172.35 Aligned_cols=165 Identities=18% Similarity=0.248 Sum_probs=133.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... .......+.+|+.+++.++|||++++++++.+. ...|+||+|++ ++|.+++....
T Consensus 20 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~----~~~~iv~e~~~-~~l~~~~~~~~ 92 (283)
T cd07835 20 DKLTGEIVALKKIRLETE--DEGVPSTAIREISLLKELNHPNIVRLLDVVHSE----NKLYLVFEFLD-LDLKKYMDSSP 92 (283)
T ss_pred EcCCCCEEEEEEeecccc--cccchhHHHHHHHHHHhcCCCCccCHhheeccC----CeEEEEEeccC-cCHHHHHhhCC
Confidence 456899999999975421 123345678899999999999999999998764 36899999995 79999987654
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+||
T Consensus 93 ~--~~~~~~~~~~~~~~i~~~L~~lH~--~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aP 168 (283)
T cd07835 93 L--TGLDPPLIKSYLYQLLQGIAYCHS--HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAP 168 (283)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCC
Confidence 2 358999999999999999999999 7799999999999999999999999998764 223457889999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. ++++++|..||.....
T Consensus 169 E~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 205 (283)
T cd07835 169 EILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE 205 (283)
T ss_pred ceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9632 2222 6899999999976543
No 312
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.92 E-value=3e-24 Score=169.77 Aligned_cols=155 Identities=17% Similarity=0.251 Sum_probs=124.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||+|.+.... ....+...+....||||+++++++.... .+|+||||+++++|.+++....
T Consensus 14 ~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~ 80 (237)
T cd05576 14 DTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSED----SVFLVLQHAEGGKLWSHISKFL 80 (237)
T ss_pred EccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCC----eEEEEEecCCCCCHHHHHHHhc
Confidence 67899999999997421 1223344445567999999999887643 5899999999999999987653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
.+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++++|||.+.. ....++..|+|||..
T Consensus 81 ----~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~ 154 (237)
T cd05576 81 ----NIPEECVKRWAAEMVVALDALHR--EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVG 154 (237)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCccc
Confidence 38999999999999999999999 7799999999999999999999999997654 234456779999973
Q ss_pred C--CCch----------hhhhhhCCCCCCcc
Q psy238 157 R--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 157 ~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
. +.+. ++++++|..|+...
T Consensus 155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~ 185 (237)
T cd05576 155 GISEETEACDWWSLGAILFELLTGKTLVECH 185 (237)
T ss_pred CCCCCCchhhHHHHHHHHHHHHHCcchhhcC
Confidence 2 2222 68999999887543
No 313
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.92 E-value=6.2e-24 Score=170.86 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=124.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..+|+|++....... .|+.....+ +||||++++++|...+ .+|+||||+++++|.+++...
T Consensus 37 ~~~~~~~~~~k~~~~~~~~~---------~e~~~~~~~~~h~~iv~~~~~~~~~~----~~~iv~e~~~~~~L~~~l~~~ 103 (267)
T PHA03390 37 HKPTQKLFVQKIIKAKNFNA---------IEPMVHQLMKDNPNFIKLYYSVTTLK----GHVLIMDYIKDGDLFDLLKKE 103 (267)
T ss_pred EcCCCcEEEEEEEehhhcch---------hhHHHHHHhhcCCCEEEEEEEEecCC----eeEEEEEcCCCCcHHHHHHhc
Confidence 35678899999987431110 112222212 7999999999997754 589999999999999999764
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-cEEEeecCcccc----ccCCCccccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-LVKIGCDTYTHT----IENKKYLSATRQTY 155 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~----~~~~~t~~y~aPE~ 155 (218)
. .+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++ .++|+|||++.. ....++..|+|||+
T Consensus 104 ~----~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~ 177 (267)
T PHA03390 104 G----KLSEAEVKKIIRQLVEALNDLHK--HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEK 177 (267)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhh
Confidence 2 58999999999999999999999 7799999999999999988 999999998765 34568899999997
Q ss_pred C--CCCch----------hhhhhhCCCCCCcchh
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
. ..++. ++++++|..||.....
T Consensus 178 ~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~ 211 (267)
T PHA03390 178 IKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED 211 (267)
T ss_pred hcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc
Confidence 3 22222 6899999999985443
No 314
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.92 E-value=1.4e-23 Score=172.80 Aligned_cols=163 Identities=19% Similarity=0.248 Sum_probs=132.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... .......+..|+.+++.++|||++++++++.... ..++||||+. ++|.+++....
T Consensus 46 ~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~-g~l~~~~~~~~ 119 (317)
T cd06635 46 DVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH----TAWLVMEYCL-GSASDLLEVHK 119 (317)
T ss_pred EcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC----eEEEEEeCCC-CCHHHHHHHhc
Confidence 3457889999998754222 2344567889999999999999999999987654 4899999996 58888776543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccCC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYGR 157 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~~ 157 (218)
.++++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....+++.|+|||+..
T Consensus 120 ---~~l~~~~~~~i~~~i~~~l~~lH~--~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~ 194 (317)
T cd06635 120 ---KPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVIL 194 (317)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhh
Confidence 358999999999999999999999 7799999999999999999999999998765 3456788999999731
Q ss_pred -----CCch----------hhhhhhCCCCCCcc
Q psy238 158 -----PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 158 -----~~~~----------~~ei~tg~~p~~~~ 175 (218)
.++. ++++++|..||...
T Consensus 195 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 227 (317)
T cd06635 195 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 227 (317)
T ss_pred cCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 1221 68999999998654
No 315
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.92 E-value=1.2e-23 Score=167.07 Aligned_cols=161 Identities=20% Similarity=0.256 Sum_probs=130.5
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
|..||+|.+... ........+.+|+.+++.+.||||+.+++++.... ..++||+|+++++|.+++.... .
T Consensus 19 ~~~v~~K~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~~~~l~~~l~~~~---~ 88 (251)
T cd05041 19 NTEVAVKTCRST---LPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ----PIYIVMELVPGGSLLTFLRKKK---N 88 (251)
T ss_pred CCcEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC----CeEEEEEcCCCCcHHHHHHhcC---C
Confidence 889999988743 22345667889999999999999999999987654 5899999999999999997643 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccccc----------CCCccccccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIE----------NKKYLSATRQTY 155 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~----------~~~t~~y~aPE~ 155 (218)
.++...+..++.|++.||.|||+ ++++|+||+|+|||++.++.++|+|||++.... ...+..|+|||.
T Consensus 89 ~~~~~~~~~~~~~~~~~l~~lH~--~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 166 (251)
T cd05041 89 RLTVKKLLQMSLDAAAGMEYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEA 166 (251)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh--CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHh
Confidence 48899999999999999999999 779999999999999999999999999876411 223566999996
Q ss_pred C--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 G--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
. ..++. +++++| |..||......
T Consensus 167 ~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~ 202 (251)
T cd05041 167 LNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ 202 (251)
T ss_pred hccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH
Confidence 2 22222 688888 88888766543
No 316
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.92 E-value=7e-24 Score=176.51 Aligned_cols=166 Identities=15% Similarity=0.157 Sum_probs=133.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||||++... .........+.+|+.++..++||||+++++++..... ....+++||+|+ +++|..++..
T Consensus 36 ~~~~~~~vavK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~ 112 (343)
T cd07880 36 DRRTGAKVAIKKLYRP--FQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH 112 (343)
T ss_pred ECCCCcEEEEEEeccc--ccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc
Confidence 4678999999998632 2224455678899999999999999999998865432 123568999999 7899988864
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQT 154 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE 154 (218)
..+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+|||
T Consensus 113 -----~~l~~~~~~~i~~qi~~al~~LH~--~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE 185 (343)
T cd07880 113 -----EKLSEDRIQFLVYQMLKGLKYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPE 185 (343)
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHH
Confidence 348999999999999999999999 7799999999999999999999999998875 2345688999999
Q ss_pred cCCC---Cch----------hhhhhhCCCCCCcchh
Q psy238 155 YGRP---ISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~~---~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+... .+. ++++++|..||.....
T Consensus 186 ~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 221 (343)
T cd07880 186 VILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH 221 (343)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 6321 222 6899999999976543
No 317
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.92 E-value=7.4e-24 Score=170.95 Aligned_cols=163 Identities=24% Similarity=0.357 Sum_probs=132.2
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..||||++..... ......+.+|+.+++.+.||||+++++++...+ ....++||||+++++|.+++....
T Consensus 31 ~~~~~~avK~~~~~~~---~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~l~~~l~~~~-- 103 (284)
T cd05038 31 NTGEQVAVKSLNHSGE---EQHRSDFEREIEILRTLDHENIVKYKGVCEKPG--GRSLRLIMEYLPSGSLRDYLQRHR-- 103 (284)
T ss_pred CCceEEEEEEeccccc---hHHHHHHHHHHHHHHhCCCCChheEEeeeecCC--CCceEEEEecCCCCCHHHHHHhCc--
Confidence 4678999999974321 145678899999999999999999999886633 346899999999999999997653
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccccc-----------CCCcccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTIE-----------NKKYLSATR 152 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~~-----------~~~t~~y~a 152 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.... ..++..|+|
T Consensus 104 -~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (284)
T cd05038 104 -DQINLKRLLLFSSQICKGMDYLGS--QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYA 180 (284)
T ss_pred -cccCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccC
Confidence 248999999999999999999999 779999999999999999999999999887522 233456999
Q ss_pred cccC--CCCch----------hhhhhhCCCCCCcch
Q psy238 153 QTYG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||.. ..++. ++++++|..|+....
T Consensus 181 Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 181 PECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred cHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 9962 22221 788999999986543
No 318
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92 E-value=4.2e-24 Score=171.34 Aligned_cols=164 Identities=18% Similarity=0.232 Sum_probs=129.1
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc--
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR-- 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-- 82 (218)
++..||||.+... ........+.+|+.+++.++||||+++++++.... ..++||+|+++++|.+++.....
T Consensus 25 ~~~~~~iK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~ 97 (269)
T cd05044 25 GPIRVAVKTLRKG---ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE----PQYIIMELMEGGDLLSYLRDARVER 97 (269)
T ss_pred cceeehhhhhhcc---cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC----CeEEEEeccCCCcHHHHHHHhhhcc
Confidence 3467999987632 11234567888999999999999999999987644 58999999999999999976432
Q ss_pred -cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-----cEEEeecCcccc----------ccCCC
Q psy238 83 -NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-----LVKIGCDTYTHT----------IENKK 146 (218)
Q Consensus 83 -~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-----~~ki~dfg~~~~----------~~~~~ 146 (218)
....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++ .++|+|||++.. ....+
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 175 (269)
T cd05044 98 FGPPLLTLKELLDICLDVAKGCVYLEQ--MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLL 175 (269)
T ss_pred cCCccccHHHHHHHHHHHHHHHHHHHh--CCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCC
Confidence 11347889999999999999999999 6799999999999999877 899999998753 12344
Q ss_pred cccccccccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 147 YLSATRQTYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 147 t~~y~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
+..|+|||+.. ..+. +++|++ |..||.....
T Consensus 176 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~ 219 (269)
T cd05044 176 PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219 (269)
T ss_pred CccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH
Confidence 67899999632 2111 789998 9999975543
No 319
>KOG1006|consensus
Probab=99.92 E-value=2.6e-25 Score=172.44 Aligned_cols=167 Identities=17% Similarity=0.193 Sum_probs=133.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHh-
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR- 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~- 79 (218)
+..+|...|||.+...+ ......+++.|..+..+- +.|+||++||.+...+ ..|+.||.|+ .||+.+...
T Consensus 85 hk~sg~~mAVKrIr~~n---~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG----dcWiCMELMd-~SlDklYk~v 156 (361)
T KOG1006|consen 85 HKPSGKLMAVKRIRSNN---IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG----DCWICMELMD-ISLDKLYKRV 156 (361)
T ss_pred cCccCcEEEEEEeeecc---chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC----ceeeeHHHHh-hhHHHHHHHH
Confidence 57899999999998642 245667788888765554 7899999999876644 4899999995 688765432
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
+.-....+|+..+-.+....+.||.||-.- ..|||||+||+|||++..|.+||||||++.. ....|-..|||
T Consensus 157 y~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmA 235 (361)
T KOG1006|consen 157 YSVQKSRIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMA 235 (361)
T ss_pred HHHHhccCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccC
Confidence 111234599999999999999999999872 3499999999999999999999999999876 66788999999
Q ss_pred cccCCCCch--------------hhhhhhCCCCCCcchh
Q psy238 153 QTYGRPISG--------------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~~~~~~~--------------~~ei~tg~~p~~~~~~ 177 (218)
||...+... ++|+.||..||..+..
T Consensus 236 PERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s 274 (361)
T KOG1006|consen 236 PERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS 274 (361)
T ss_pred hhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH
Confidence 997332221 7999999999988766
No 320
>KOG0196|consensus
Probab=99.92 E-value=8.9e-25 Score=189.63 Aligned_cols=163 Identities=19% Similarity=0.267 Sum_probs=137.7
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||||.++. .........|+.|..||.++.||||++|.|+...+.+ +.+|+|||++|+|+.||+.+.+ .
T Consensus 658 ~~VAIKTLK~---GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P----vMIiTEyMENGsLDsFLR~~DG---q 727 (996)
T KOG0196|consen 658 ITVAIKTLKA---GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP----VMIITEYMENGSLDSFLRQNDG---Q 727 (996)
T ss_pred eeEEEeeecc---CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce----eEEEhhhhhCCcHHHHHhhcCC---c
Confidence 5799999985 4557788899999999999999999999999987654 8899999999999999999864 4
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccccccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLSATRQTY 155 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~y~aPE~ 155 (218)
|...+...+++.|+.|+.||.+ .++|||||..+|||++.+..+|++|||+++. ....-...|.|||.
T Consensus 728 ftviQLVgMLrGIAsGMkYLsd--m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEA 805 (996)
T KOG0196|consen 728 FTVIQLVGMLRGIASGMKYLSD--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEA 805 (996)
T ss_pred eEeehHHHHHHHHHHHhHHHhh--cCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhH
Confidence 8888999999999999999999 5599999999999999999999999999975 11222478999996
Q ss_pred --CCCCchhhhhh-----------hCCCCCCcchhhhhH
Q psy238 156 --GRPISGQYEIV-----------TKTNNVTEKKKEKEE 181 (218)
Q Consensus 156 --~~~~~~~~ei~-----------tg~~p~~~~~~ee~~ 181 (218)
...++.+.|+| -|.+||++.+.++.=
T Consensus 806 Ia~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI 844 (996)
T KOG0196|consen 806 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 844 (996)
T ss_pred hhhcccCchhhccccceEEEEecccCCCcccccchHHHH
Confidence 34555554443 389999998887653
No 321
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.92 E-value=6e-24 Score=169.65 Aligned_cols=162 Identities=20% Similarity=0.262 Sum_probs=136.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||||++..... ......+.+|+.++..++||||+++++++.... .+++||+|+++++|.+++...
T Consensus 22 ~~~~~~~~~vk~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~- 93 (264)
T cd06623 22 HKPTGKIYALKKIHVDGD---EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG----EISIVLEYMDGGSLADLLKKV- 93 (264)
T ss_pred EcCCCcEEEEEEeccCcc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC----eEEEEEEecCCCcHHHHHHHc-
Confidence 345789999999875321 255678899999999999999999999987653 689999999999999999865
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~a 152 (218)
..+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+... ...++..|+|
T Consensus 94 ---~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~ 168 (264)
T cd06623 94 ---GKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMS 168 (264)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccC
Confidence 348999999999999999999999 76 999999999999999999999999988751 3456788999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||+.. ..+. ++++++|..||....
T Consensus 169 pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 169 PERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred HhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 99732 1111 689999999997765
No 322
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.92 E-value=1.6e-23 Score=167.34 Aligned_cols=159 Identities=13% Similarity=0.202 Sum_probs=124.4
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..||+|.+.. .........+.+|+.+++.++||||+++++++...+ +..++||+|+.+++|.+++....
T Consensus 22 ~~~~~aiK~~~~---~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~~~--- 92 (262)
T cd05058 22 QKIHCAVKSLNR---ITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE---GSPLVVLPYMKHGDLRNFIRSET--- 92 (262)
T ss_pred ceEEEEEEecCc---cCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC---CCcEEEEecCCCCCHHHHHHhcC---
Confidence 346799998753 122345567888999999999999999999775432 24789999999999999997643
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc------------cCCCcccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------ENKKYLSATR 152 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++... ...++..|+|
T Consensus 93 ~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~a 170 (262)
T cd05058 93 HNPTVKDLIGFGLQVAKGMEYLAS--KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMA 170 (262)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccC
Confidence 236777888999999999999999 77999999999999999999999999988631 2334678999
Q ss_pred cccC--CCCch----------hhhhhhC-CCCCCc
Q psy238 153 QTYG--RPISG----------QYEIVTK-TNNVTE 174 (218)
Q Consensus 153 PE~~--~~~~~----------~~ei~tg-~~p~~~ 174 (218)
||+. ..++. ++++++| ..||..
T Consensus 171 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 205 (262)
T cd05058 171 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 205 (262)
T ss_pred hhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9963 23222 6888885 555654
No 323
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92 E-value=1.1e-23 Score=170.58 Aligned_cols=161 Identities=19% Similarity=0.291 Sum_probs=133.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|++.... . ....+..|+.++..++||||+++++++.... ..|+|++|+++++|.+++....
T Consensus 41 ~~~~~~~~iK~~~~~~----~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~- 110 (286)
T cd06614 41 RATGKEVAIKKMRLRK----Q-NKELIINEILIMKDCKHPNIVDYYDSYLVGD----ELWVVMEYMDGGSLTDIITQNF- 110 (286)
T ss_pred ccCCcEEEEEEEecCc----h-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC----EEEEEEeccCCCcHHHHHHHhc-
Confidence 3468899999997431 1 4567888999999999999999999987753 5899999999999999998764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
..++...++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++.. ....++..|+|||
T Consensus 111 --~~l~~~~~~~i~~~i~~~L~~lH~--~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE 186 (286)
T cd06614 111 --VRMNEPQIAYVCREVLQGLEYLHS--QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPE 186 (286)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHh
Confidence 258999999999999999999999 7799999999999999999999999998764 2334678899999
Q ss_pred cC--CCCch----------hhhhhhCCCCCCcchh
Q psy238 155 YG--RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~--~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+. ..++. ++++++|..||.....
T Consensus 187 ~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~ 221 (286)
T cd06614 187 VIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP 221 (286)
T ss_pred HhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH
Confidence 72 22222 7999999999975443
No 324
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.92 E-value=9.3e-24 Score=168.21 Aligned_cols=155 Identities=23% Similarity=0.299 Sum_probs=125.7
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..|++|++... ......+.+|+.+++.+.||||+++++++.. . ..++||||+++++|.+++..... .
T Consensus 31 ~~v~~k~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----~~~lv~e~~~~~~L~~~l~~~~~---~ 97 (259)
T cd05037 31 VSVVLKVLGSD-----HRDSLAFFETASLMSQLSHKHLVKLYGVCVR-D----ENIMVEEYVKFGPLDVFLHREKN---N 97 (259)
T ss_pred eeeeeeccccc-----hhhHHHHHHHHHHHHcCCCcchhheeeEEec-C----CcEEEEEcCCCCcHHHHHHhhcc---C
Confidence 35778877632 1125778899999999999999999998876 3 36999999999999999987542 5
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-------cEEEeecCcccc----ccCCCccccccccc
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-------LVKIGCDTYTHT----IENKKYLSATRQTY 155 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-------~~ki~dfg~~~~----~~~~~t~~y~aPE~ 155 (218)
++...+..++.||+.||.|||+ .+|+|+||+|+|||++.++ .++|+|||++.. ....++..|+|||+
T Consensus 98 ~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~ 175 (259)
T cd05037 98 VSLHWKLDVAKQLASALHYLED--KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPEC 175 (259)
T ss_pred CCHHHHHHHHHHHHHHHHHHhh--CCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhh
Confidence 8999999999999999999999 7799999999999999887 899999998876 24456788999997
Q ss_pred CC----CCch----------hhhhhh-CCCCCCcch
Q psy238 156 GR----PISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 156 ~~----~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
.. ..+. ++++++ |..||....
T Consensus 176 ~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~ 211 (259)
T cd05037 176 IRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS 211 (259)
T ss_pred hcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC
Confidence 32 2222 678888 577776654
No 325
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.92 E-value=1.1e-23 Score=170.01 Aligned_cols=164 Identities=21% Similarity=0.219 Sum_probs=131.5
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
++..||+|.+.. .........+.+|+.++..+.||||+++++++.... ...+++++|+++++|.+++......
T Consensus 34 ~~~~v~~k~~~~---~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~l~~~~~~~ 107 (280)
T cd05043 34 KEEEVFVKTVKD---HASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG---EPPFVLYPYMNWGNLKLFLQQCRLGE 107 (280)
T ss_pred ceeEEEEEEccC---CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---CCCEEEEEcCCCCcHHHHHHhccccc
Confidence 367899998863 222445677889999999999999999999876542 2478999999999999999765322
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCcccc
Q psy238 84 ---VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLSA 150 (218)
Q Consensus 84 ---~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~y 150 (218)
+..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+++.. ...++..|
T Consensus 108 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y 185 (280)
T cd05043 108 ANNPQALSTQQLVHMAIQIACGMSYLHK--RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKW 185 (280)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhc
Confidence 1458999999999999999999999 77999999999999999999999999998641 23456789
Q ss_pred cccccCC--CCch----------hhhhhh-CCCCCCcch
Q psy238 151 TRQTYGR--PISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 151 ~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
+|||+.. .++. ++++++ |..||....
T Consensus 186 ~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 224 (280)
T cd05043 186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID 224 (280)
T ss_pred cCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC
Confidence 9999732 2222 688888 999997653
No 326
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=1.5e-23 Score=166.23 Aligned_cols=163 Identities=23% Similarity=0.295 Sum_probs=135.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+.+|+.++..++|||++++++++.+. ..+++||+|+++++|.+++...
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~L~~~~~~~- 93 (254)
T cd06627 21 NLETGDFVAIKQISLEKI--KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS----DSLYIILEYAENGSLRQIIKKF- 93 (254)
T ss_pred EcCCCcEEEEEEeccccc--CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC----CEEEEEEecCCCCcHHHHHHhc-
Confidence 345788999999985422 134567889999999999999999999998764 3689999999999999999865
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++.++|+|||++.. ....++..|+||
T Consensus 94 ---~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~p 168 (254)
T cd06627 94 ---GPFPESLVAVYVYQVLQGLAYLHE--QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAP 168 (254)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCH
Confidence 348999999999999999999999 7799999999999999999999999998875 234678899999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|+.. ..+. ++++++|..||....
T Consensus 169 e~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 169 EVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred hhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 9732 1111 689999999997544
No 327
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.92 E-value=1.5e-23 Score=166.31 Aligned_cols=167 Identities=26% Similarity=0.400 Sum_probs=137.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+..|++++..++|||++++++.+... ...++|++++++++|.+++....
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~ 94 (258)
T cd08215 21 RKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEK----GKLCIVMEYADGGDLSQKIKKQK 94 (258)
T ss_pred EcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecC----CEEEEEEEecCCCcHHHHHHHhh
Confidence 345789999999975321 235566788999999999999999999988764 36899999999999999998764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
.....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....+++.|+||
T Consensus 95 ~~~~~~~~~~~~~i~~~i~~~l~~lh~--~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~p 172 (258)
T cd08215 95 KEGKPFPEEQILDWFVQLCLALKYLHS--RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSP 172 (258)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccCh
Confidence 333569999999999999999999999 7799999999999999999999999998765 234568889999
Q ss_pred ccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 154 TYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|... .++. ++++++|..||....
T Consensus 173 e~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 207 (258)
T cd08215 173 ELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN 207 (258)
T ss_pred hHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence 9622 2222 688999999997654
No 328
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.92 E-value=1.4e-23 Score=169.33 Aligned_cols=165 Identities=15% Similarity=0.183 Sum_probs=129.4
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN- 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~- 83 (218)
++..||+|.+... ........+.+|+.+++.++||||+++++++.+.. ..++||||+++++|.+++......
T Consensus 35 ~~~~v~ik~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~g~~L~~~i~~~~~~~ 107 (277)
T cd05036 35 VELQVAVKTLPES---CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL----PRFILLELMAGGDLKSFLRENRPRP 107 (277)
T ss_pred CceeEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CcEEEEecCCCCCHHHHHHHhCCCC
Confidence 5678999987632 22344567888999999999999999999887654 479999999999999999765321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC---cEEEeecCccccc----------cCCCcc
Q psy238 84 --VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG---LVKIGCDTYTHTI----------ENKKYL 148 (218)
Q Consensus 84 --~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~---~~ki~dfg~~~~~----------~~~~t~ 148 (218)
...+++..+..++.||+.||.|||+ .+++|+||+|+|||++.++ .++|+|||++... ....+.
T Consensus 108 ~~~~~~~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 185 (277)
T cd05036 108 ERPSSLTMKDLLFCARDVAKGCKYLEE--NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPI 185 (277)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccH
Confidence 1248899999999999999999999 7799999999999998754 6999999988642 122246
Q ss_pred cccccccC--CCCch----------hhhhhh-CCCCCCcchhh
Q psy238 149 SATRQTYG--RPISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 149 ~y~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.|+|||+. ..++. ++++++ |..||.+...+
T Consensus 186 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~ 228 (277)
T cd05036 186 KWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ 228 (277)
T ss_pred hhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 79999973 33333 678786 99999865543
No 329
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=1e-23 Score=169.67 Aligned_cols=164 Identities=18% Similarity=0.219 Sum_probs=130.2
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
+...||+|.+... ........+.+|+.+++.++||||+++++++.+.. ..|+||||+++++|.+++.......
T Consensus 34 ~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~~~~~~ 106 (275)
T cd05046 34 GETLVLVKALQKT---KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE----PHYMILEYTDLGDLKQFLRATKSKD 106 (275)
T ss_pred CcceEEEEccCCc---cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC----cceEEEEecCCCcHHHHHHhccccc
Confidence 3467999988632 22335667889999999999999999999986644 4799999999999999998654211
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccc
Q psy238 85 -----KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSA 150 (218)
Q Consensus 85 -----~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y 150 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++++|||++.. ....++..|
T Consensus 107 ~~~~~~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y 184 (275)
T cd05046 107 EKLKPPPLSTKQKVALCTQIALGMDHLSN--ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRW 184 (275)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhhh--cCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEee
Confidence 258999999999999999999999 6799999999999999999999999998753 233456779
Q ss_pred cccccC--CCCch----------hhhhhh-CCCCCCcchh
Q psy238 151 TRQTYG--RPISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~--~~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
+|||.. ...+. ++++++ |..||.....
T Consensus 185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~ 224 (275)
T cd05046 185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD 224 (275)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch
Confidence 999962 22222 678887 7888865443
No 330
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.91 E-value=7.4e-24 Score=168.58 Aligned_cols=165 Identities=20% Similarity=0.337 Sum_probs=133.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+..... .......+.+|+.+++.++||||+++++.+.... .+++|+||+++++|.+++....
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~ 94 (257)
T cd08225 21 AKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQENG----RLFIVMEYCDGGDLMKRINRQR 94 (257)
T ss_pred EcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccCC----eEEEEEecCCCCcHHHHHHhcc
Confidence 456788999999875321 1234457788999999999999999999886643 6899999999999999997653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-cEEEeecCcccc--------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-LVKIGCDTYTHT--------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~--------~~~~~t~~y~a 152 (218)
. ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++ .++|+|||.+.. ....+++.|+|
T Consensus 95 ~--~~~~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~a 170 (257)
T cd08225 95 G--VLFSEDQILSWFVQISLGLKHIHD--RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLS 170 (257)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccC
Confidence 2 357899999999999999999999 6799999999999998875 569999998764 22357888999
Q ss_pred cccCC--CCch----------hhhhhhCCCCCCcch
Q psy238 153 QTYGR--PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~~--~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||+.. .++. ++++++|..||....
T Consensus 171 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 206 (257)
T cd08225 171 PEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN 206 (257)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 99732 2222 688999999997554
No 331
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.91 E-value=4.4e-24 Score=170.61 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=124.6
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
...||+|.+.. ......+.+..|+.+++.+.||||+++++++.... ..++||||+++++|..++.... .
T Consensus 27 ~~~~~~k~~~~----~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~---~ 95 (258)
T cd05078 27 KTEVLLKVLDK----SHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD----ESIMVQEYVKFGSLDTYLKKNK---N 95 (258)
T ss_pred cchhhHHhhcc----hhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC----CcEEEEecCCCCcHHHHHhcCC---C
Confidence 34588887752 22445567888999999999999999999987643 4799999999999999997643 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCc--------EEEeecCcccc----ccCCCccccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGL--------VKIGCDTYTHT----IENKKYLSATRQ 153 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~--------~ki~dfg~~~~----~~~~~t~~y~aP 153 (218)
.+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++. ++++|||++.. ....++..|+||
T Consensus 96 ~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aP 173 (258)
T cd05078 96 LINISWKLEVAKQLAWALHFLED--KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPP 173 (258)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCc
Confidence 48899999999999999999999 77999999999999987754 69999998765 345678899999
Q ss_pred ccCCC---Cch----------hhhhhhCC-CCCCc
Q psy238 154 TYGRP---ISG----------QYEIVTKT-NNVTE 174 (218)
Q Consensus 154 E~~~~---~~~----------~~ei~tg~-~p~~~ 174 (218)
|+... .+. +|++++|. .|+..
T Consensus 174 E~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~ 208 (258)
T cd05078 174 ECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA 208 (258)
T ss_pred hhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh
Confidence 97321 221 68899985 55544
No 332
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.91 E-value=4.4e-24 Score=178.72 Aligned_cols=151 Identities=19% Similarity=0.221 Sum_probs=122.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..++..||+|+.... ....|+.+++.++||||+++++++.... ..++||+++. ++|.+++....
T Consensus 88 ~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~- 151 (357)
T PHA03209 88 PGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSGA----ITCMVLPHYS-SDLYTYLTKRS- 151 (357)
T ss_pred CCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeCC----eeEEEEEccC-CcHHHHHHhcc-
Confidence 456778999975421 2346889999999999999999987644 5899999995 69998887643
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY 155 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~ 155 (218)
..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....||..|+|||+
T Consensus 152 --~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~ 227 (357)
T PHA03209 152 --RPLPIDQALIIEKQILEGLRYLHA--QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEV 227 (357)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCee
Confidence 458999999999999999999999 7799999999999999999999999998864 34568999999997
Q ss_pred CC--CCch----------hhhhhhCCCCCC
Q psy238 156 GR--PISG----------QYEIVTKTNNVT 173 (218)
Q Consensus 156 ~~--~~~~----------~~ei~tg~~p~~ 173 (218)
.. .++. +|+++++..|+.
T Consensus 228 ~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 228 LARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 32 2222 688888766653
No 333
>KOG1094|consensus
Probab=99.91 E-value=6.9e-25 Score=185.29 Aligned_cols=167 Identities=20% Similarity=0.256 Sum_probs=133.8
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
.+..||||.++. .........|..||.+|.++.||||+.|+++|...++ +|+|+||+++|+|.+|+..+..
T Consensus 561 g~lkVAVK~Lr~---~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP----icmI~EYmEnGDLnqFl~ahea-- 631 (807)
T KOG1094|consen 561 GPLKVAVKILRP---DATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP----LCMITEYMENGDLNQFLSAHEL-- 631 (807)
T ss_pred CceEEEEeecCc---ccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc----hHHHHHHHhcCcHHHHHHhccC--
Confidence 357899999984 2334456889999999999999999999999988764 8999999999999999998742
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQT 154 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE 154 (218)
..+......+++.||++|+.||.+++ +|||||.|.|+|++.++++||+|||+++. ....-...|||+|
T Consensus 632 pt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawE 709 (807)
T KOG1094|consen 632 PTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWE 709 (807)
T ss_pred cccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHH
Confidence 11344556779999999999999966 99999999999999999999999999984 2233468999999
Q ss_pred c--CCCCch----------hhhh--hhCCCCCCcchhhhhHH
Q psy238 155 Y--GRPISG----------QYEI--VTKTNNVTEKKKEKEEE 182 (218)
Q Consensus 155 ~--~~~~~~----------~~ei--~tg~~p~~~~~~ee~~~ 182 (218)
. ...++. ++|+ ++-..||....++..=+
T Consensus 710 sillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve 751 (807)
T KOG1094|consen 710 SILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE 751 (807)
T ss_pred HHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH
Confidence 4 334444 4554 56678887776665433
No 334
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.91 E-value=1.7e-23 Score=167.37 Aligned_cols=159 Identities=23% Similarity=0.270 Sum_probs=127.7
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
.+..||+|.+... ......+.+|+.+++.++|+||+++++++.. . ..+++|+|+++++|.+++.....
T Consensus 29 ~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~----~~~~v~e~~~~~~L~~~~~~~~~-- 96 (260)
T cd05073 29 KHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E----PIYIITEFMAKGSLLDFLKSDEG-- 96 (260)
T ss_pred CCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C----CeEEEEEeCCCCcHHHHHHhCCc--
Confidence 4556999988632 2234678889999999999999999998865 2 47999999999999999976532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..|+|||+
T Consensus 97 ~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 174 (260)
T cd05073 97 SKQPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 174 (260)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhH
Confidence 457888999999999999999999 77999999999999999999999999987541 2234567999997
Q ss_pred CC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 156 GR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 156 ~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.. .++. ++++++ |..||.+...
T Consensus 175 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 175 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred hccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 32 2221 688998 8999976543
No 335
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91 E-value=2.1e-23 Score=171.43 Aligned_cols=164 Identities=20% Similarity=0.258 Sum_probs=133.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... .......+..|+.+++.++|||++++++++.+.. ..|+||||+. ++|.+++....
T Consensus 42 ~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~ 115 (313)
T cd06633 42 NSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH----TAWLVMEYCL-GSASDLLEVHK 115 (313)
T ss_pred ECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC----EEEEEEecCC-CCHHHHHHhcC
Confidence 3567899999998754322 2344567888999999999999999999987754 5899999995 68888876543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccC-
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYG- 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~- 156 (218)
.++++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.. ....++..|+|||+.
T Consensus 116 ---~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~ 190 (313)
T cd06633 116 ---KPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVIL 190 (313)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhcc
Confidence 358999999999999999999999 7799999999999999999999999998765 345678899999973
Q ss_pred ----CCCch----------hhhhhhCCCCCCcch
Q psy238 157 ----RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 157 ----~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
..++. ++++++|..||....
T Consensus 191 ~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 191 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22221 689999999997653
No 336
>KOG3653|consensus
Probab=99.91 E-value=2.5e-24 Score=177.90 Aligned_cols=141 Identities=17% Similarity=0.200 Sum_probs=120.3
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhc--CCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ--LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~--l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
-+++.||||++. ....+.+++|-.|.+. +.|+||+++++.-.........+++|++|.+.|||.+||..+.
T Consensus 231 L~~~~VAVKifp-------~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt 303 (534)
T KOG3653|consen 231 LDNRLVAVKIFP-------EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT 303 (534)
T ss_pred ccCceeEEEecC-------HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc
Confidence 356899999998 4566777877777655 4899999999886655444556899999999999999999864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhc-CC------CCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHS-CS------PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IEN 144 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~------~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~ 144 (218)
+++....+++..++.||+|||+ .. .+|+|||||+.||||-.|+.+.|+|||++-. ...
T Consensus 304 -----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~q 378 (534)
T KOG3653|consen 304 -----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQ 378 (534)
T ss_pred -----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhh
Confidence 8999999999999999999996 21 4699999999999999999999999999865 457
Q ss_pred CCcccccccccC
Q psy238 145 KKYLSATRQTYG 156 (218)
Q Consensus 145 ~~t~~y~aPE~~ 156 (218)
+||..|||||+.
T Consensus 379 VGT~RYMAPEvL 390 (534)
T KOG3653|consen 379 VGTRRYMAPEVL 390 (534)
T ss_pred hhhhhhcCHHHH
Confidence 899999999983
No 337
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.91 E-value=1.2e-23 Score=166.73 Aligned_cols=164 Identities=18% Similarity=0.225 Sum_probs=134.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++..... ........+..|+.+++.++||||+++++.+.... .+|+||+|+++++|.+++....
T Consensus 15 ~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~l~~~~- 88 (250)
T cd05123 15 KDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE----KLYLVLEYAPGGELFSHLSKEG- 88 (250)
T ss_pred CCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC----eeEEEEecCCCCcHHHHHHhcC-
Confidence 45789999999875422 22335567889999999999999999998886543 6899999999999999997653
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCcccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQT 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE 154 (218)
.+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+|||
T Consensus 89 ---~l~~~~~~~~~~qi~~~l~~lh~--~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe 163 (250)
T cd05123 89 ---RFSEERARFYAAEIVLALEYLHS--LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPE 163 (250)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChH
Confidence 48999999999999999999999 6799999999999999999999999998865 2345788999999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
... ..+. ++++++|..||.....
T Consensus 164 ~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~ 198 (250)
T cd05123 164 VLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR 198 (250)
T ss_pred HhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence 732 1111 6999999999976543
No 338
>KOG0983|consensus
Probab=99.91 E-value=1.1e-24 Score=169.64 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=132.8
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+|..+|||.+... +......+++..+.++...+ .|.||+.+|+|.... .+++.||.|. ..+..++....
T Consensus 114 rs~~~iiAVK~M~rt---~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~----dV~IcMelMs-~C~ekLlkrik 185 (391)
T KOG0983|consen 114 RSTGHIIAVKQMRRT---GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT----DVFICMELMS-TCAEKLLKRIK 185 (391)
T ss_pred cccceEEEEEeeccc---CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc----hHHHHHHHHH-HHHHHHHHHhc
Confidence 457899999998753 33456677888888877765 899999999998754 3889999984 56777776643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
.++|+..+-.+...++.||.||-+. ++|+|||+||+|||+|+.|++|+||||++.. ....|-+.|||||
T Consensus 186 ---~piPE~ilGk~tva~v~AL~YLKeK-H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPE 261 (391)
T KOG0983|consen 186 ---GPIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPE 261 (391)
T ss_pred ---CCchHHhhhhhHHHHHHHHHHHHHh-cceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCcc
Confidence 5699999999999999999999874 5799999999999999999999999999876 4567889999999
Q ss_pred cCCCCch---------------hhhhhhCCCCCCcch
Q psy238 155 YGRPISG---------------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~~~~~---------------~~ei~tg~~p~~~~~ 176 (218)
...+.+. ++|+.||..||.+..
T Consensus 262 Ridp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~ 298 (391)
T KOG0983|consen 262 RIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK 298 (391)
T ss_pred ccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC
Confidence 7554322 799999999998754
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=8.7e-24 Score=171.41 Aligned_cols=162 Identities=16% Similarity=0.195 Sum_probs=131.1
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+|..||||++..............+.+|+.++..+ +||+|+.+++++.... .+|+||||+++++|.+++...
T Consensus 25 ~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~- 99 (288)
T cd05583 25 HDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT----KLHLILDYVNGGELFTHLYQR- 99 (288)
T ss_pred ccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC----EEEEEEecCCCCcHHHHHhhc-
Confidence 3567889999987432222233456778899999999 6999999998886543 589999999999999998754
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|.||+++.++.++|+|||++.. ....++..|+|
T Consensus 100 ---~~~~~~~~~~~~~ql~~~l~~lH~--~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a 174 (288)
T cd05583 100 ---EHFTESEVRVYIAEIVLALDHLHQ--LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMA 174 (288)
T ss_pred ---CCcCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccC
Confidence 348899999999999999999999 7799999999999999999999999998764 12357889999
Q ss_pred cccCCC----Cch----------hhhhhhCCCCCCc
Q psy238 153 QTYGRP----ISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 153 PE~~~~----~~~----------~~ei~tg~~p~~~ 174 (218)
||.... .+. ++++++|..||..
T Consensus 175 PE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 175 PEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred HHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 996221 111 6899999999964
No 340
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.91 E-value=1.3e-23 Score=175.07 Aligned_cols=166 Identities=18% Similarity=0.185 Sum_probs=131.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
|..+|..||+|.+... .........+.+|+.++..++||||+++++++..... ....+|++++++ +++|.+++..
T Consensus 38 ~~~~~~~vaiK~~~~~--~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~ 114 (345)
T cd07877 38 DTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC 114 (345)
T ss_pred EcCCCeEEEEEEecCc--chhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc
Confidence 4578999999988742 1122345567889999999999999999998864321 123478888887 7899888764
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQT 154 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE 154 (218)
. .+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+|||
T Consensus 115 ~-----~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE 187 (345)
T cd07877 115 Q-----KLTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 187 (345)
T ss_pred C-----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHH
Confidence 2 38999999999999999999999 7799999999999999999999999998875 2346788999999
Q ss_pred cCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 155 YGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+.. ..+. ++++++|..||.....
T Consensus 188 ~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 223 (345)
T cd07877 188 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 223 (345)
T ss_pred HHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 621 2222 6899999999975443
No 341
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.91 E-value=6.1e-24 Score=176.37 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=132.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCC-CCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH-NDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|..+|..||||.+.... ........+.+|+.+++.++||||+++++++.... .....+|+|++|+. ++|.+++...
T Consensus 26 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~ 102 (337)
T cd07858 26 NSETNEKVAIKKIANAF--DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSS 102 (337)
T ss_pred ecCCCCeEEEEEecccc--cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcC
Confidence 46789999999987431 12233456778999999999999999999876542 12245899999995 7999888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~a 152 (218)
..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|
T Consensus 103 ----~~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~a 176 (337)
T cd07858 103 ----QTLSDDHCQYFLYQLLRGLKYIHS--ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRA 176 (337)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccC
Confidence 359999999999999999999999 77999999999999999999999999988752 2356888999
Q ss_pred cccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 153 QTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||+.. .++. ++++++|..||.+..
T Consensus 177 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 213 (337)
T cd07858 177 PELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD 213 (337)
T ss_pred hHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC
Confidence 99622 2222 689999999997653
No 342
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.91 E-value=3.4e-23 Score=166.37 Aligned_cols=170 Identities=19% Similarity=0.220 Sum_probs=130.1
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCC--CeEEEEEeccCCCCHHHHHHhhc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDK--PRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
.+|..||||++... .......+.+.+|+.+++.++||||+++++++......+ ...+++++|+.+++|..++....
T Consensus 25 ~~~~~~aiK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 102 (273)
T cd05074 25 GSFQKVAVKMLKAD--IFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSR 102 (273)
T ss_pred CCceEEEEEEeccc--cCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhc
Confidence 46789999998743 222345667889999999999999999999886643221 23478899999999998876432
Q ss_pred c--cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc----------cCCCccc
Q psy238 82 R--NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI----------ENKKYLS 149 (218)
Q Consensus 82 ~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~----------~~~~t~~ 149 (218)
. ....++...++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++... ...+++.
T Consensus 103 ~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
T cd05074 103 IGEEPFTLPLQTLVRFMIDIASGMEYLSS--KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVK 180 (273)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchh
Confidence 1 12347889999999999999999999 77999999999999999999999999987641 2233467
Q ss_pred ccccccCC--CCch----------hhhhhh-CCCCCCcchh
Q psy238 150 ATRQTYGR--PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 150 y~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
|++||... ..+. ++++++ |..||.+...
T Consensus 181 ~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~ 221 (273)
T cd05074 181 WLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN 221 (273)
T ss_pred hcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH
Confidence 89999622 2222 688888 8888875543
No 343
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91 E-value=1.2e-23 Score=174.12 Aligned_cols=162 Identities=19% Similarity=0.209 Sum_probs=131.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|..||||.+.... ........+..|+.++..+.||||++++++|.... ..+|+||+|+ +++|..++..
T Consensus 31 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~lv~e~~-~~~L~~~~~~-- 102 (328)
T cd07856 31 DQLTGQNVAIKKIMKPF--STPVLAKRTYRELKLLKHLRHENIISLSDIFISPL---EDIYFVTELL-GTDLHRLLTS-- 102 (328)
T ss_pred ECCCCCEEEEEEecccc--cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC---CcEEEEeehh-ccCHHHHHhc--
Confidence 45689999999886431 22334567788999999999999999999886533 2589999998 5799888864
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQTYG 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE~~ 156 (218)
.+++...+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||.+.. ....++..|+|||+.
T Consensus 103 ---~~~~~~~~~~~~~ql~~aL~~LH~--~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~ 177 (328)
T cd07856 103 ---RPLEKQFIQYFLYQILRGLKYVHS--AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIM 177 (328)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceee
Confidence 247888999999999999999999 7799999999999999999999999998865 234567889999963
Q ss_pred ---CCCch----------hhhhhhCCCCCCcch
Q psy238 157 ---RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 157 ---~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
..++. ++++++|..||....
T Consensus 178 ~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~ 210 (328)
T cd07856 178 LTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD 210 (328)
T ss_pred eccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 22222 688999999997654
No 344
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.91 E-value=1.6e-23 Score=173.73 Aligned_cols=165 Identities=18% Similarity=0.176 Sum_probs=130.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
|..+|..||+|.+... .........+.+|+.++..+ +||||+++++++.... ...+|+||||++ ++|..++...
T Consensus 28 ~~~~~~~~~vK~~~~~--~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--~~~~~lv~e~~~-~~L~~~~~~~ 102 (337)
T cd07852 28 DRRTKEVVALKKIFDA--FRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--DKDIYLVFEYME-TDLHAVIRAN 102 (337)
T ss_pred EcCCCeEEEEEeeccc--cCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC--CceEEEEecccc-cCHHHHHhcC
Confidence 4567899999988632 11123345677899999999 9999999999886532 235899999996 6999888653
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-------------cCCCc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-------------ENKKY 147 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-------------~~~~t 147 (218)
.+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++... ...++
T Consensus 103 -----~~~~~~~~~i~~qi~~~L~~LH~--~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~ 175 (337)
T cd07852 103 -----ILEDVHKRYIMYQLLKALKYIHS--GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVAT 175 (337)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhccccc
Confidence 47888999999999999999999 77999999999999999999999999988641 13467
Q ss_pred ccccccccCC---CCch----------hhhhhhCCCCCCcchhh
Q psy238 148 LSATRQTYGR---PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 148 ~~y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
..|+|||+.. ..+. ++++++|+.||.+....
T Consensus 176 ~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~ 219 (337)
T cd07852 176 RWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL 219 (337)
T ss_pred ccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH
Confidence 8899999621 1111 78999999999765443
No 345
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.91 E-value=3.1e-23 Score=164.82 Aligned_cols=160 Identities=24% Similarity=0.329 Sum_probs=130.1
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
+..||+|.+... ........+..|+.++..++||||+++++++.+.. ..+++|+|+++++|.+++..... .
T Consensus 28 ~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~i~e~~~~~~l~~~~~~~~~--~ 98 (258)
T smart00219 28 EVEVAVKTLKED---ADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE----PLMIVMEYMEGGDLLDYLRKNRP--K 98 (258)
T ss_pred CceEEEEEccCC---CChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC----eeEEEEeccCCCCHHHHHHhhhh--c
Confidence 488999999743 22225678889999999999999999999987753 58999999999999999986532 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccccC
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTYG 156 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~~ 156 (218)
.+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...+++.|+|||..
T Consensus 99 ~~~~~~~~~~~~ql~~~l~~lh~--~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~ 176 (258)
T smart00219 99 ELSLSDLLSFALQIARGMEYLES--KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESL 176 (258)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhc--CCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHh
Confidence 28999999999999999999999 77999999999999999999999999998652 12366889999963
Q ss_pred --CCCch----------hhhhhh-CCCCCCcch
Q psy238 157 --RPISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 157 --~~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
..++. ++++++ |..||....
T Consensus 177 ~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~ 209 (258)
T smart00219 177 KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS 209 (258)
T ss_pred ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 22222 578887 788887643
No 346
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.91 E-value=2e-23 Score=166.19 Aligned_cols=160 Identities=18% Similarity=0.311 Sum_probs=128.4
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
++..+|+|.+.... .....+.+|+.+++.+.||+|+++++++.... .+++||+|+++++|.+++....
T Consensus 27 ~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~~--- 94 (256)
T cd05112 27 EKRKVAIKTIREGA-----MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS----PICLVFEFMEHGCLSDYLRAQR--- 94 (256)
T ss_pred CCCeEEEEECCCCC-----CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC----ceEEEEEcCCCCcHHHHHHhCc---
Confidence 36789999886321 12345788999999999999999999986644 5899999999999999987643
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCccccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQTY 155 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE~ 155 (218)
..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++... ...++..|+|||+
T Consensus 95 ~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~ 172 (256)
T cd05112 95 GKFSQETLLGMCLDVCEGMAYLES--SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEV 172 (256)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhH
Confidence 348899999999999999999999 77999999999999999999999999987641 2234568999997
Q ss_pred CC--CCch----------hhhhhh-CCCCCCcchhh
Q psy238 156 GR--PISG----------QYEIVT-KTNNVTEKKKE 178 (218)
Q Consensus 156 ~~--~~~~----------~~ei~t-g~~p~~~~~~e 178 (218)
.. .++. ++++++ |..||.....+
T Consensus 173 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 208 (256)
T cd05112 173 FSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS 208 (256)
T ss_pred hccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 32 2222 688887 99999765443
No 347
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.91 E-value=2.3e-23 Score=166.50 Aligned_cols=165 Identities=18% Similarity=0.236 Sum_probs=134.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++..... ......+.+|+.+++.+.|+||+++++.+.... .+++||+++++++|.+++.....
T Consensus 23 ~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~iv~e~~~~~~l~~~~~~~~~ 95 (267)
T cd06610 23 LPNNEKVAIKRIDLEKC---QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD----ELWLVMPYLSGGSLLDIMKSSYP 95 (267)
T ss_pred cCCCcEEEEEEeccCCc---chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC----EEEEEEeccCCCcHHHHHHHhcc
Confidence 45788999999874321 225677899999999999999999999887643 68999999999999999976432
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCcccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKYLSA 150 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t~~y 150 (218)
...+++..+..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++.. ....++..|
T Consensus 96 -~~~~~~~~~~~~~~ql~~al~~lh~--~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y 172 (267)
T cd06610 96 -RGGLDEAIIATVLKEVLKGLEYLHS--NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCW 172 (267)
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhh
Confidence 1348999999999999999999999 7799999999999999999999999998764 112477889
Q ss_pred cccccCCC---Cch----------hhhhhhCCCCCCcchh
Q psy238 151 TRQTYGRP---ISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~~~---~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+|||+... ++. +++|++|..||.....
T Consensus 173 ~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~ 212 (267)
T cd06610 173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP 212 (267)
T ss_pred cChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh
Confidence 99996221 111 7999999999976543
No 348
>KOG0695|consensus
Probab=99.91 E-value=9.2e-25 Score=174.59 Aligned_cols=161 Identities=19% Similarity=0.245 Sum_probs=132.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..|.+.||+|+++.. ..+......-++.|-.+..+. +||++|-|+.+|... .++++|.||++||+|.-.++..+
T Consensus 272 ~~t~qiyamkvvkke-l~nddedidwvqtek~vfe~asn~pflvglhscfqte----srlffvieyv~ggdlmfhmqrqr 346 (593)
T KOG0695|consen 272 KKTDQIYAMKVVKKE-LVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE----SRLFFVIEYVNGGDLMFHMQRQR 346 (593)
T ss_pred cccceeeehhhHHHH-hcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc----ceEEEEEEEecCcceeeehhhhh
Confidence 457789999999843 222223333455566666555 899999999998764 37999999999999998888765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
. +|++.++.+...|+.||.|||+ +|||.||||.+|+|+|..|+++++|+|++.. .+.+||+.|+||
T Consensus 347 k----lpeeharfys~ei~lal~flh~--rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiap 420 (593)
T KOG0695|consen 347 K----LPEEHARFYSAEICLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAP 420 (593)
T ss_pred c----CcHHHhhhhhHHHHHHHHHHhh--cCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccch
Confidence 4 9999999999999999999999 8899999999999999999999999999865 678999999999
Q ss_pred ccCC--CC--ch--------hhhhhhCCCCCCc
Q psy238 154 TYGR--PI--SG--------QYEIVTKTNNVTE 174 (218)
Q Consensus 154 E~~~--~~--~~--------~~ei~tg~~p~~~ 174 (218)
|+.. .+ +. ++||+.|+.||+-
T Consensus 421 eilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 421 EILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred hhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 9732 21 11 7999999999973
No 349
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.91 E-value=2.2e-23 Score=172.74 Aligned_cols=166 Identities=20% Similarity=0.188 Sum_probs=131.4
Q ss_pred CCCCCcEEEEEEeecccccccH----------HHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCC
Q psy238 2 DTEEGVEVVWNEVQFSERKNFK----------AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSG 71 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~----------~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~ 71 (218)
|..+|..||||.+......... .....+.+|+.++..++||||+++++++.... .+++||||+. +
T Consensus 30 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~-~ 104 (335)
T PTZ00024 30 DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD----FINLVMDIMA-S 104 (335)
T ss_pred ECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC----cEEEEEeccc-c
Confidence 4568999999998753221100 01124678999999999999999999987543 6899999996 6
Q ss_pred CHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------
Q psy238 72 SLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------- 142 (218)
Q Consensus 72 sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------- 142 (218)
+|.+++... ..+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++...
T Consensus 105 ~l~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~--~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 178 (335)
T PTZ00024 105 DLKKVVDRK----IRLTESQVKCILLQILNGLNVLHK--WYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTL 178 (335)
T ss_pred CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecccccHHHeEECCCCCEEECCccceeecccccccccc
Confidence 999998754 348999999999999999999999 67999999999999999999999999987542
Q ss_pred -------------cCCCcccccccccCCC---Cch----------hhhhhhCCCCCCcchhh
Q psy238 143 -------------ENKKYLSATRQTYGRP---ISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 143 -------------~~~~t~~y~aPE~~~~---~~~----------~~ei~tg~~p~~~~~~e 178 (218)
...++..|+|||+... .+. ++++++|..||......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 179 SKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred cccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 2345778999997321 122 68999999999766543
No 350
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.91 E-value=4.9e-23 Score=165.23 Aligned_cols=168 Identities=16% Similarity=0.228 Sum_probs=133.0
Q ss_pred CCcEEEEEEeeccccc------ccHHHHHHHHHHHHHhhc-CCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHH
Q psy238 5 EGVEVVWNEVQFSERK------NFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~------~~~~~~~~~~~ei~~l~~-l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l 77 (218)
++..||+|.+...... ........+..|+.++.. ++||||+++++++...+ +.++||||+++++|.+++
T Consensus 25 ~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~l 100 (269)
T cd08528 25 GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND----RLYIVMDLIEGAPLGEHF 100 (269)
T ss_pred CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC----eEEEEEecCCCCcHHHHH
Confidence 5678999988643211 223344567788887765 79999999999987643 689999999999999998
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccc
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSA 150 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y 150 (218)
.........++...++.++.|++.||.|||+. .+++|+||+|+|||++.++.++|+|||.+.. ....++..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 179 (269)
T cd08528 101 NSLKEKKQRFTEERIWNIFVQMVLALRYLHKE-KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILY 179 (269)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHhccC-CceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccC
Confidence 76443345689999999999999999999961 4599999999999999999999999998865 245678899
Q ss_pred cccccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 151 TRQTYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+|||+.. .++. ++++++|..||.....
T Consensus 180 ~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~ 218 (269)
T cd08528 180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM 218 (269)
T ss_pred cChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH
Confidence 9999733 2222 6999999999975543
No 351
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.91 E-value=3.2e-23 Score=163.70 Aligned_cols=160 Identities=26% Similarity=0.357 Sum_probs=134.3
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++.... ......+.+|+.+++.+.||+|+++++++.... ..+++++|+++++|.+++....
T Consensus 22 ~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~l~~e~~~~~~L~~~~~~~~- 92 (253)
T cd05122 22 KRTGKEVAIKVIKLES----KEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD----ELWIVMEFCSGGSLKDLLKSTN- 92 (253)
T ss_pred CCCCcEEEEEEecccc----hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----eEEEEEecCCCCcHHHHHhhcC-
Confidence 4578899999997431 245678889999999999999999999987653 5899999999999999988753
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-------cCCCccccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-------ENKKYLSATRQTY 155 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-------~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.+||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..|+|||+
T Consensus 93 --~~~~~~~~~~i~~~i~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~ 168 (253)
T cd05122 93 --QTLTESQIAYVCKELLKGLEYLHS--NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEV 168 (253)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHhhc--CCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHH
Confidence 358999999999999999999999 77999999999999999999999999987652 3456889999997
Q ss_pred CC--CCch----------hhhhhhCCCCCCcc
Q psy238 156 GR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 156 ~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
.. ..+. ++++++|..||...
T Consensus 169 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 169 INGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred HcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 32 2221 69999999999765
No 352
>KOG0669|consensus
Probab=99.91 E-value=2.6e-25 Score=171.46 Aligned_cols=171 Identities=17% Similarity=0.285 Sum_probs=136.6
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCC----CCeEEEEEeccCCCCHHHHHH
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND----KPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~ 78 (218)
..+|+.||+|.+-..+.. .......++|+.+|+.+.|+|++.++..|...... ...+|+||++|+ .+|.-++.
T Consensus 39 ~n~~kkvalkkvlmeneK--eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLs 115 (376)
T KOG0669|consen 39 KNTGKKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLS 115 (376)
T ss_pred cCccchhHHHHHHHhccc--cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhc
Confidence 457788899877654222 33456788999999999999999999988664332 334899999996 69999998
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCC
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKK 146 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~ 146 (218)
... -.+++..+..++.++..||.|+|+ ..|+|||+||.|+||+.+|.++|+|||+++. ...+.
T Consensus 116 n~~---vr~sls~Ikk~Mk~Lm~GL~~iHr--~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvv 190 (376)
T KOG0669|consen 116 NRK---VRFSLSEIKKVMKGLMNGLYYIHR--NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVV 190 (376)
T ss_pred Ccc---ccccHHHHHHHHHHHHHHHHHHHH--hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCccccee
Confidence 753 359999999999999999999999 6699999999999999999999999999854 23445
Q ss_pred ccccccccc--CC-----CCc------hhhhhhhCCCCCCcchhhhhH
Q psy238 147 YLSATRQTY--GR-----PIS------GQYEIVTKTNNVTEKKKEKEE 181 (218)
Q Consensus 147 t~~y~aPE~--~~-----~~~------~~~ei~tg~~p~~~~~~ee~~ 181 (218)
|.+|.+||+ |. +++ .+.+||++..-|.+..+..+.
T Consensus 191 TLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql 238 (376)
T KOG0669|consen 191 TLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL 238 (376)
T ss_pred eeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHH
Confidence 999999996 22 222 278999999888877665543
No 353
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.91 E-value=2.5e-23 Score=172.32 Aligned_cols=162 Identities=15% Similarity=0.154 Sum_probs=128.2
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
|..||+|.+... .........+.+|+.++..+ .||||+++++.+.........++++++++. ++|.+++...
T Consensus 27 ~~~~aiK~~~~~--~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~---- 99 (332)
T cd07857 27 EETVAIKKITNV--FSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSG---- 99 (332)
T ss_pred CceEEEEEeccc--cccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcC----
Confidence 788999998732 12233456778899999999 599999999876543222345789999985 7999988654
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCcccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKYLSATR 152 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t~~y~a 152 (218)
..+++..++.++.||+.||.|||+ .+|+|+||+|+|||++.++.++|+|||++.. ....++..|+|
T Consensus 100 ~~~~~~~~~~~~~qi~~aL~~LH~--~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~a 177 (332)
T cd07857 100 QPLTDAHFQSFIYQILCGLKYIHS--ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRA 177 (332)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccC
Confidence 348999999999999999999999 7799999999999999999999999998864 12357889999
Q ss_pred cccC---CCCch----------hhhhhhCCCCCCcch
Q psy238 153 QTYG---RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~---~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
||+. ...+. ++++++|..||....
T Consensus 178 PE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~ 214 (332)
T cd07857 178 PEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD 214 (332)
T ss_pred cHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 9963 22222 688999999997654
No 354
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.91 E-value=3.7e-23 Score=163.98 Aligned_cols=165 Identities=26% Similarity=0.356 Sum_probs=137.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..|++|++.... ........+.+|+.+++.++||||+++++++.+.. ...+++|+||+++++|.+++....
T Consensus 21 ~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~ 96 (260)
T cd06606 21 DKDTGELMAVKSVELSG--DSEEELEALEREIRILSSLQHPNIVRYYGSERDEE--KNTLNIFLEYVSGGSLSSLLKKFG 96 (260)
T ss_pred ECCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC--CCeEEEEEEecCCCcHHHHHHHcC
Confidence 34578999999987542 22456678899999999999999999999987652 236899999999999999998653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSAT 151 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~ 151 (218)
.+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+
T Consensus 97 ----~~~~~~~~~~~~~l~~~l~~lh~--~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~ 170 (260)
T cd06606 97 ----KLPEPVIRKYTRQILEGLAYLHS--NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWM 170 (260)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCcccc
Confidence 58999999999999999999999 7799999999999999999999999998765 2345788999
Q ss_pred ccccCCC--Cch----------hhhhhhCCCCCCcch
Q psy238 152 RQTYGRP--ISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 152 aPE~~~~--~~~----------~~ei~tg~~p~~~~~ 176 (218)
|||.... .+. ++++++|..||....
T Consensus 171 ~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 171 APEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred CHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9997321 111 699999999997665
No 355
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.91 E-value=2.3e-23 Score=169.83 Aligned_cols=167 Identities=22% Similarity=0.293 Sum_probs=130.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCC------CCCCeEEEEEeccCCCCHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH------NDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~------~~~~~~~lv~e~~~~~sL~~ 75 (218)
+..+|..||||.+...... ......+.+|+.+++.++||||+++++++.+.. .+...+++||||+++ +|..
T Consensus 28 ~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 104 (302)
T cd07864 28 DKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMG 104 (302)
T ss_pred ECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHH
Confidence 3457899999999754211 223346678999999999999999999886643 123378999999974 8877
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCC
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKK 146 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~ 146 (218)
++.... ..+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++... ...+
T Consensus 105 ~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 179 (302)
T cd07864 105 LLESGL---VHFSEDHIKSFMKQLLEGLNYCHK--KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVI 179 (302)
T ss_pred HHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCcEEeCcccccccccCCccccccccee
Confidence 776542 358999999999999999999999 77999999999999999999999999988752 1234
Q ss_pred cccccccccCC---CCch----------hhhhhhCCCCCCcch
Q psy238 147 YLSATRQTYGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 147 t~~y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+..|+|||+.. ..+. +++|++|+.||....
T Consensus 180 ~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~ 222 (302)
T cd07864 180 TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ 222 (302)
T ss_pred ccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 67899999632 1122 688999999997543
No 356
>KOG1035|consensus
Probab=99.91 E-value=2.5e-24 Score=194.02 Aligned_cols=146 Identities=22% Similarity=0.328 Sum_probs=120.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCC--------------------------
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH-------------------------- 55 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~-------------------------- 55 (218)
++-+|+.||||.+.... .......+.+|+.+|.+++|||||+++..|..+.
T Consensus 500 NKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~ 576 (1351)
T KOG1035|consen 500 NKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGV 576 (1351)
T ss_pred ecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcccCCCcccc
Confidence 46789999999998642 4567778999999999999999999988765422
Q ss_pred ---------------------------C----------------------------------------------------
Q psy238 56 ---------------------------N---------------------------------------------------- 56 (218)
Q Consensus 56 ---------------------------~---------------------------------------------------- 56 (218)
.
T Consensus 577 ~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~ 656 (1351)
T KOG1035|consen 577 DIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTE 656 (1351)
T ss_pred eeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccC
Confidence 0
Q ss_pred --CC--------CeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEe
Q psy238 57 --DK--------PRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ 126 (218)
Q Consensus 57 --~~--------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~ 126 (218)
.. ..+|+-||||+..+|.+++...... -....+|++++||+.||.|+|+ .|||||||||.||+++
T Consensus 657 n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLaYIH~--~giIHRDLKP~NIFLd 731 (1351)
T KOG1035|consen 657 NSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLAYIHD--QGIIHRDLKPRNIFLD 731 (1351)
T ss_pred CccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHHHHh--CceeeccCCcceeEEc
Confidence 00 2378999999876677777654321 1478899999999999999999 7799999999999999
Q ss_pred cCCcEEEeecCcccc--------------------------ccCCCccccccccc
Q psy238 127 HNGLVKIGCDTYTHT--------------------------IENKKYLSATRQTY 155 (218)
Q Consensus 127 ~~~~~ki~dfg~~~~--------------------------~~~~~t~~y~aPE~ 155 (218)
+++.|+|+|||++.. ++..||.-|+|||+
T Consensus 732 ~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 732 SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 999999999998765 45689999999998
No 357
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.91 E-value=3e-23 Score=168.14 Aligned_cols=166 Identities=17% Similarity=0.164 Sum_probs=129.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||.+.... .......+.+|+.++.++. ||||+++++++.... ..+++|+|+. ++|.++....
T Consensus 25 ~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~----~~~~~~e~~~-~~l~~l~~~~ 96 (288)
T cd06616 25 HKPSGTIMAVKRIRSTV---DEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG----DCWICMELMD-ISLDKFYKYV 96 (288)
T ss_pred ECCCCCEEEEEEehhcc---ChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC----cEEEEEeccc-CCHHHHHHHH
Confidence 45678999999987432 1245567889999999996 999999999887643 4789999985 5776654321
Q ss_pred c-ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccc
Q psy238 81 K-RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
. .....+++..+..++.|++.||.|||+. .+++||||+|+|||++.++.++|+|||++.. ....++..|+|
T Consensus 97 ~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~a 175 (288)
T cd06616 97 YEVLKSVIPEEILGKIAVATVKALNYLKEE-LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 175 (288)
T ss_pred HHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccC
Confidence 1 1124589999999999999999999972 2699999999999999999999999998764 23467889999
Q ss_pred cccCCC-----Cch----------hhhhhhCCCCCCcch
Q psy238 153 QTYGRP-----ISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 153 PE~~~~-----~~~----------~~ei~tg~~p~~~~~ 176 (218)
||+... ++. ++++++|..||....
T Consensus 176 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 214 (288)
T cd06616 176 PERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN 214 (288)
T ss_pred HHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence 997321 222 689999999997543
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.91 E-value=1.7e-23 Score=172.94 Aligned_cols=169 Identities=21% Similarity=0.209 Sum_probs=135.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCC-CCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH-NDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||||.+... .........+.+|+.+++.++||||+++++++.... .....+|+||+|++ ++|.+++...
T Consensus 21 ~~~~~~~~~iK~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~ 97 (330)
T cd07834 21 DKRTGRKVAIKKISNV--FDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSP 97 (330)
T ss_pred eCCCCcEEEEEeeccc--cccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCC
Confidence 3457899999998743 112345567889999999999999999999987754 22346899999996 6898888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------cCCCccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------ENKKYLS 149 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------~~~~t~~ 149 (218)
..+++..++.++.|++.||.|||+ .||+|+||+|.|||++.++.++|+|||++... ...++..
T Consensus 98 ----~~l~~~~~~~i~~~l~~~l~~LH~--~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~ 171 (330)
T cd07834 98 ----QPLTDDHIQYFLYQILRGLKYLHS--ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW 171 (330)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccC
Confidence 359999999999999999999999 77999999999999999999999999988752 2345778
Q ss_pred ccccccCC---CCch----------hhhhhhCCCCCCcchhhh
Q psy238 150 ATRQTYGR---PISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 150 y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
|+|||+.. .++. ++++++|..||.+...++
T Consensus 172 y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~ 214 (330)
T cd07834 172 YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID 214 (330)
T ss_pred cCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH
Confidence 99999732 2222 689999999998776543
No 359
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.91 E-value=2e-23 Score=168.00 Aligned_cols=165 Identities=22% Similarity=0.302 Sum_probs=134.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|++..+... .......+..|+.++..+. ||||+++++++.... .+++||+++++++|.+++...
T Consensus 22 ~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~ 96 (280)
T cd05581 22 EKETNKEYAIKILDKRQLI-KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE----NLYFVLEYAPNGELLQYIRKY 96 (280)
T ss_pred EcCCCCEEEEEEechHhcc-chHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc----eEEEEEcCCCCCcHHHHHHHc
Confidence 3458999999998753221 2334467788999999998 999999999886643 589999999999999999865
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc------------------
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI------------------ 142 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~------------------ 142 (218)
. .+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++++|||++...
T Consensus 97 ~----~l~~~~~~~i~~ql~~~l~~Lh~--~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~ 170 (280)
T cd05581 97 G----SLDEKCTRFYAAEILLALEYLHS--KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDS 170 (280)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccc
Confidence 3 49999999999999999999999 67999999999999999999999999987641
Q ss_pred ----------cCCCcccccccccCC--CCch----------hhhhhhCCCCCCcchh
Q psy238 143 ----------ENKKYLSATRQTYGR--PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 143 ----------~~~~t~~y~aPE~~~--~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
...++..|+|||+.. ..+. ++++++|..||.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 171 QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 124578899999622 2221 6899999999987653
No 360
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.90 E-value=2.2e-23 Score=173.45 Aligned_cols=164 Identities=16% Similarity=0.168 Sum_probs=129.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||||.+.... ........+.+|+.++..++||||+++++++..... ....+|+|++|+. .+|..++.
T Consensus 36 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~- 111 (342)
T cd07879 36 DKRTGEKVAIKKLSRPF--QSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG- 111 (342)
T ss_pred eCCCCcEEEEEEecCcc--ccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc-
Confidence 45689999999987431 112334567889999999999999999999865432 2235799999995 57776652
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQT 154 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE 154 (218)
..+++..+..++.|++.||.|||+ .+++||||+|+|||++.++.++|+|||++.. ....++..|+|||
T Consensus 112 -----~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE 184 (342)
T cd07879 112 -----HPLSEDKVQYLVYQMLCGLKYIHS--AGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPE 184 (342)
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChh
Confidence 248899999999999999999999 7799999999999999999999999999865 2345678899999
Q ss_pred cCC---CCch----------hhhhhhCCCCCCcch
Q psy238 155 YGR---PISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 155 ~~~---~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.. .++. ++++++|+.||.+..
T Consensus 185 ~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~ 219 (342)
T cd07879 185 VILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 219 (342)
T ss_pred hhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 732 2221 799999999998654
No 361
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.90 E-value=2.8e-23 Score=186.38 Aligned_cols=143 Identities=20% Similarity=0.239 Sum_probs=121.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|+.||||++..... ........+..|+.++..+.||||+++++++.... ++|+||||+.+++|.+++...
T Consensus 25 ~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----~~~lVmEy~~g~~L~~li~~~- 98 (669)
T cd05610 25 KKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN----NVYLVMEYLIGGDVKSLLHIY- 98 (669)
T ss_pred ECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC----EEEEEEeCCCCCCHHHHHHhc-
Confidence 346789999999974322 22345567889999999999999999998886643 699999999999999999764
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..++.++.||+.||.|||+ .+|+||||+|+|||++.++.++|+|||++.. ....+|+.|++|
T Consensus 99 ---~~l~~~~~~~i~~qil~aL~yLH~--~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~p 173 (669)
T cd05610 99 ---GYFDEEMAVKYISEVALALDYLHR--HGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKP 173 (669)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcccccccccCccccCc
Confidence 348899999999999999999999 6799999999999999999999999999875 345678899999
Q ss_pred cc
Q psy238 154 TY 155 (218)
Q Consensus 154 E~ 155 (218)
|.
T Consensus 174 e~ 175 (669)
T cd05610 174 KN 175 (669)
T ss_pred cc
Confidence 84
No 362
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.90 E-value=6.4e-23 Score=168.21 Aligned_cols=163 Identities=21% Similarity=0.275 Sum_probs=131.7
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+...... .......+.+|+.+++.++|||++++++++.... ..++||||+. ++|.+++....
T Consensus 36 ~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~-~~l~~~~~~~~ 109 (308)
T cd06634 36 DVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH----TAWLVMEYCL-GSASDLLEVHK 109 (308)
T ss_pred EcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC----eeEEEEEccC-CCHHHHHHHcC
Confidence 3567889999998743222 2344566788999999999999999999987643 5899999996 68888776543
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccC-
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYG- 156 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~- 156 (218)
.+++...+..++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++.. ....++..|+|||+.
T Consensus 110 ---~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~ 184 (308)
T cd06634 110 ---KPLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVIL 184 (308)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHh
Confidence 348899999999999999999999 7799999999999999999999999998765 345678899999962
Q ss_pred ----CCCch----------hhhhhhCCCCCCcc
Q psy238 157 ----RPISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 157 ----~~~~~----------~~ei~tg~~p~~~~ 175 (218)
...+. ++++++|..||...
T Consensus 185 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred hcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 11211 68999999998654
No 363
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.90 E-value=4.1e-23 Score=166.74 Aligned_cols=166 Identities=21% Similarity=0.297 Sum_probs=133.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ........+.+|+.+++.++|||++++++++.... ...+++||+|++ ++|..++....
T Consensus 20 ~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~~~~~~ 94 (287)
T cd07840 20 NKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG--KGSIYMVFEYMD-HDLTGLLDSPE 94 (287)
T ss_pred ECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCC--CCcEEEEecccc-ccHHHHHhccC
Confidence 34578899999998542 12334466788999999999999999999987652 246999999996 59998887542
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATR 152 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~a 152 (218)
..+++..++.++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||.+... ...++..|+|
T Consensus 95 ---~~~~~~~~~~i~~~i~~al~~LH~--~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~ 169 (287)
T cd07840 95 ---VKFTESQIKCYMKQLLEGLQYLHS--NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRP 169 (287)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCC
Confidence 358999999999999999999999 77999999999999999999999999988752 2345778999
Q ss_pred ccc--CC-CCch----------hhhhhhCCCCCCcchh
Q psy238 153 QTY--GR-PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 153 PE~--~~-~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
||. +. .++. ++++++|..||.....
T Consensus 170 PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~ 207 (287)
T cd07840 170 PELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE 207 (287)
T ss_pred ceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 995 21 2222 6899999999976553
No 364
>KOG0670|consensus
Probab=99.90 E-value=3.3e-24 Score=179.21 Aligned_cols=167 Identities=19% Similarity=0.267 Sum_probs=137.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC------CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE------HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~------hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~ 75 (218)
|..-|.+||||+|... ......=+.|++||.+|+ --++++|+..|.... |+|||||.+ ..+|.+
T Consensus 453 D~~r~~~vAiKIIRnN-----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn----HLClVFE~L-slNLRe 522 (752)
T KOG0670|consen 453 DQARGQEVAIKIIRNN-----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN----HLCLVFEPL-SLNLRE 522 (752)
T ss_pred ccCCCCeeEEEEeecc-----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc----eeEEEehhh-hchHHH
Confidence 5677889999999743 344455678999999985 356999988886643 899999999 489999
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc------ccCCCcc
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT------IENKKYL 148 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~------~~~~~t~ 148 (218)
+|..++.+ -.+.+..+..|+.|++.||..|-.|+ |+|.||||+||||++. ..++|||||.+.. .+...+-
T Consensus 523 vLKKyG~n-vGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSR 599 (752)
T KOG0670|consen 523 VLKKYGRN-VGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSR 599 (752)
T ss_pred HHHHhCcc-cceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccCccccccccccccHHHHHH
Confidence 99998754 34888999999999999999999987 9999999999999876 7899999998876 4455567
Q ss_pred ccccccc--CCCCc----------hhhhhhhCCCCCCcchhhhhH
Q psy238 149 SATRQTY--GRPIS----------GQYEIVTKTNNVTEKKKEKEE 181 (218)
Q Consensus 149 ~y~aPE~--~~~~~----------~~~ei~tg~~p~~~~~~ee~~ 181 (218)
.|.|||+ |-+++ .+||+|||+.-|.+.......
T Consensus 600 FYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 600 FYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred hccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 8999996 33333 289999999999988776544
No 365
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.90 E-value=6.9e-23 Score=165.23 Aligned_cols=164 Identities=18% Similarity=0.210 Sum_probs=128.0
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+|..||+|.+..... . .......+|+.++..+. ||||+++++++.+.. .+.+++||||++ ++|.+++...
T Consensus 20 ~~~~~~~~aik~~~~~~~-~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~l~~~ 93 (282)
T cd07831 20 SRKTGKYYAIKCMKKHFK-S--LEQVNNLREIQALRRLSPHPNILRLIEVLFDRK--TGRLALVFELMD-MNLYELIKGR 93 (282)
T ss_pred EcCCCcEEEEEEehhccC-C--chhhhHHHHHHHHhhcCCCCCccceEEEEecCC--CCcEEEEEecCC-ccHHHHHHhc
Confidence 356789999998874311 1 12223457888888885 999999999987642 236899999996 6888888754
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQ 153 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aP 153 (218)
. ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++. +.++|+|||++.. ....++..|+||
T Consensus 94 ~---~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP 167 (282)
T cd07831 94 K---RPLPEKRVKSYMYQLLKSLDHMHR--NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAP 167 (282)
T ss_pred c---CCCCHHHHHHHHHHHHHHHHHHHH--CCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCCh
Confidence 3 358999999999999999999999 77999999999999999 9999999998865 223468889999
Q ss_pred ccC---CCCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYG---RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~---~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+. ...+. +++|++|..||.....
T Consensus 168 E~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~ 204 (282)
T cd07831 168 ECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE 204 (282)
T ss_pred hHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH
Confidence 952 11122 7899999999976543
No 366
>KOG2052|consensus
Probab=99.90 E-value=1e-23 Score=173.27 Aligned_cols=142 Identities=20% Similarity=0.209 Sum_probs=120.5
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC--CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL--EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l--~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
.+.|+.||||++.. .....+.+|.+|.+.+ +|+||+.+++.-..+..+-..+|||++|.+.|||.|||...
T Consensus 231 ~wrGe~VAVKiF~s-------rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~ 303 (513)
T KOG2052|consen 231 RWRGEDVAVKIFSS-------RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN 303 (513)
T ss_pred cccCCceEEEEecc-------cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc
Confidence 46799999999973 3455677888887765 99999999887655444445799999999999999999874
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhc--CC----CCcccCCCCCCcEEEecCCcEEEeecCcccc------------c
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHS--CS----PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------I 142 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~----~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~ 142 (218)
.++....++++..+++||.+||- .| ..|.|||||+.||||-.++.+.|+|+|++-. +
T Consensus 304 -----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N 378 (513)
T KOG2052|consen 304 -----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPN 378 (513)
T ss_pred -----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCC
Confidence 39999999999999999999993 11 4699999999999999999999999999754 6
Q ss_pred cCCCcccccccccC
Q psy238 143 ENKKYLSATRQTYG 156 (218)
Q Consensus 143 ~~~~t~~y~aPE~~ 156 (218)
..+||-.|||||+.
T Consensus 379 ~rVGTKRYMAPEvL 392 (513)
T KOG2052|consen 379 PRVGTKRYMAPEVL 392 (513)
T ss_pred CccceeeccChHHh
Confidence 78999999999983
No 367
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.90 E-value=3.8e-23 Score=169.01 Aligned_cols=169 Identities=20% Similarity=0.261 Sum_probs=130.9
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC----CCCeEEEEEeccCCCCHHHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN----DKPRVIFITEYMSSGSLKQFL 77 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~----~~~~~~lv~e~~~~~sL~~~l 77 (218)
+..+|..||||.+...... ......+.+|+.++..++||||+++++++..... ....+++||+|+. ++|...+
T Consensus 29 ~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~ 105 (311)
T cd07866 29 QIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLL 105 (311)
T ss_pred ECCCCcEEEEEEEEeccCC--CCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHH
Confidence 4567899999998753221 1223456789999999999999999988765432 2346899999995 5787777
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------------
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------------- 142 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------------- 142 (218)
.... ..+++..+..++.|++.||.|||+ .+|+|+||+|+|||++.++.++|+|||++...
T Consensus 106 ~~~~---~~~~~~~~~~i~~~l~~al~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 180 (311)
T cd07866 106 ENPS---VKLTESQIKCYMLQLLEGINYLHE--NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGT 180 (311)
T ss_pred hccc---cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccc
Confidence 6532 359999999999999999999999 77999999999999999999999999988641
Q ss_pred ----cCCCcccccccccCC---CCch----------hhhhhhCCCCCCcchhh
Q psy238 143 ----ENKKYLSATRQTYGR---PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 143 ----~~~~t~~y~aPE~~~---~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
...+++.|+|||+.. ..+. ++++++|..||.+....
T Consensus 181 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 181 RKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred cccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 123467799999621 1222 68999999999765554
No 368
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.90 E-value=4.2e-23 Score=166.45 Aligned_cols=164 Identities=20% Similarity=0.278 Sum_probs=133.8
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|.+.... ........+.+|+.+++.++||||+++++++.+.. .+++||||++ ++|.+++....
T Consensus 20 ~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~-~~l~~~l~~~~ 92 (283)
T cd05118 20 DKLTGEIVAIKKIKLRF--ESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG----DLYLVFEFMD-TDLYKLIKDRQ 92 (283)
T ss_pred cCCCCcEEEEEEecccc--ccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC----CEEEEEeccC-CCHHHHHHhhc
Confidence 45689999999987542 22245567888999999999999999999987653 5899999996 59988887643
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc--------cCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI--------ENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~--------~~~~t~~y~aP 153 (218)
..+++..++.++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||.+... ...++..|+||
T Consensus 93 ---~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~P 167 (283)
T cd05118 93 ---RGLPESLIKSYLYQLLQGLAFCHS--HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAP 167 (283)
T ss_pred ---ccCCHHHHHHHHHHHHHHHHHHHH--CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCc
Confidence 358999999999999999999999 77999999999999999999999999987641 24467889999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|... ..+. ++++++|..||.....
T Consensus 168 E~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~ 204 (283)
T cd05118 168 ELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE 204 (283)
T ss_pred HHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9722 2222 6899999999976654
No 369
>KOG1152|consensus
Probab=99.90 E-value=5.5e-24 Score=179.67 Aligned_cols=163 Identities=20% Similarity=0.200 Sum_probs=130.0
Q ss_pred CCCCCCcEEEEEEeecccccccHHH----HHHHHHHHHHhhcCC---CCcccceeeeeecCCCCCCeEEEEEecc-CCCC
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQ----EEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRVIFITEYM-SSGS 72 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~----~~~~~~ei~~l~~l~---hp~iv~l~~~~~~~~~~~~~~~lv~e~~-~~~s 72 (218)
+++++..+|+||.+..+...-..-. .-.+--||+||..++ |+||++++++|++.+ ++|++||.- +|.+
T Consensus 581 i~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd----~yyl~te~hg~gID 656 (772)
T KOG1152|consen 581 IHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD----YYYLETEVHGEGID 656 (772)
T ss_pred eecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC----eeEEEecCCCCCcc
Confidence 4667788999999974321110000 112334899999997 999999999998865 589999986 5678
Q ss_pred HHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------ccCCC
Q psy238 73 LKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------IENKK 146 (218)
Q Consensus 73 L~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------~~~~~ 146 (218)
|.++|...++ +++..+..++.||+.|+.+||+ .+|||||||-+|++++.+|-++|+|||.+.. ...+|
T Consensus 657 LFd~IE~kp~----m~E~eAk~IFkQV~agi~hlh~--~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~g 730 (772)
T KOG1152|consen 657 LFDFIEFKPR----MDEPEAKLIFKQVVAGIKHLHD--QGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVG 730 (772)
T ss_pred hhhhhhccCc----cchHHHHHHHHHHHhccccccc--cCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeee
Confidence 9999998754 9999999999999999999999 7899999999999999999999999998765 56899
Q ss_pred ccccccccc--CCCCch-----------hhhhhhCCCCCC
Q psy238 147 YLSATRQTY--GRPISG-----------QYEIVTKTNNVT 173 (218)
Q Consensus 147 t~~y~aPE~--~~~~~~-----------~~ei~tg~~p~~ 173 (218)
|..|.|||+ |..+-. +|.|+-..+||.
T Consensus 731 tv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 731 TVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999998 333332 466666666664
No 370
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.90 E-value=1.1e-22 Score=164.33 Aligned_cols=169 Identities=20% Similarity=0.228 Sum_probs=130.3
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC---CCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHH
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l---~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
..+|..||+|.+..... .......+.+|+.++..+ .||||+++++++..... +...++++|||+. ++|.+++.
T Consensus 21 ~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~ 97 (287)
T cd07838 21 LNTGRFVALKKVRVPLS--EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLS 97 (287)
T ss_pred CCCCCEEEEEEeccccc--cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHH
Confidence 34689999999975422 122334556677766555 69999999999887543 2234899999996 58999887
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSAT 151 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~ 151 (218)
.... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+
T Consensus 98 ~~~~--~~l~~~~~~~~~~~i~~al~~LH~--~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 173 (287)
T cd07838 98 KCPK--PGLPPETIKDLMRQLLRGVDFLHS--HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYR 173 (287)
T ss_pred HccC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCChhhEEEccCCCEEEeccCcceeccCCccccccccccccc
Confidence 6432 358999999999999999999999 7799999999999999999999999998765 2334678899
Q ss_pred ccccCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 152 RQTYGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 152 aPE~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
|||+.. .++. +++|++|..||......
T Consensus 174 ~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~ 212 (287)
T cd07838 174 APEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA 212 (287)
T ss_pred ChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH
Confidence 999732 2111 79999999999765543
No 371
>KOG1095|consensus
Probab=99.90 E-value=3e-23 Score=187.47 Aligned_cols=166 Identities=15% Similarity=0.234 Sum_probs=137.0
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc---
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN--- 83 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~--- 83 (218)
..||||.+.. .........|++|..+|+.++|||||+++|++.+... .++++|||.||+|..||+..+.+
T Consensus 723 ~~vaiK~l~~---~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~----~~i~leyM~gGDL~sflr~~r~~~~~ 795 (1025)
T KOG1095|consen 723 IQVAVKSLKR---LSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP----PLILLEYMEGGDLLSFLRESRPAPFQ 795 (1025)
T ss_pred eEEEEEeccc---cCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC----cEEEehhcccCcHHHHHHhcccccCC
Confidence 3488888874 3446778899999999999999999999999988553 79999999999999999987321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------cc-CCCccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IE-NKKYLSATRQ 153 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~-~~~t~~y~aP 153 (218)
...+.....+.++.+|+.|+.||++ .++|||||..+|+|++....+||+|||+++. .. ..-...||||
T Consensus 796 ~~~L~~~dLl~~a~dvA~G~~YLe~--~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~P 873 (1025)
T KOG1095|consen 796 PSNLSMRDLLAFALDVAKGMNYLES--KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPP 873 (1025)
T ss_pred CCCCCHHHHHHHHHHHhhhhHHHHh--CCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCH
Confidence 2348889999999999999999999 7799999999999999999999999999984 11 2335799999
Q ss_pred ccCC--CCch----------hhhhhh-CCCCCCcchhhhhH
Q psy238 154 TYGR--PISG----------QYEIVT-KTNNVTEKKKEKEE 181 (218)
Q Consensus 154 E~~~--~~~~----------~~ei~t-g~~p~~~~~~ee~~ 181 (218)
|... .++. ++||+| |..||.+....+.-
T Consensus 874 Esl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~ 914 (1025)
T KOG1095|consen 874 ESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL 914 (1025)
T ss_pred HHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH
Confidence 9632 3333 688776 78899888776653
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.90 E-value=3.2e-23 Score=172.42 Aligned_cols=164 Identities=20% Similarity=0.249 Sum_probs=129.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCC----------CCeEEEEEeccCCC
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND----------KPRVIFITEYMSSG 71 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~----------~~~~~lv~e~~~~~ 71 (218)
+..+|..||+|.+..... .....+.+|+.+++.++||||+++++++...... ...+|+||||++ +
T Consensus 26 ~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~ 100 (342)
T cd07854 26 DSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-T 100 (342)
T ss_pred ECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-c
Confidence 567899999999875422 3446678899999999999999999877654321 125789999996 6
Q ss_pred CHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCcccc---------
Q psy238 72 SLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT--------- 141 (218)
Q Consensus 72 sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~--------- 141 (218)
+|.+++.. ..+++..++.++.|++.||.|||+ .+|+|+||+|+||+++. ++.++|+|||++..
T Consensus 101 ~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~--~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (342)
T cd07854 101 DLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKG 173 (342)
T ss_pred cHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccccc
Confidence 89888753 248999999999999999999999 77999999999999974 56889999998864
Q ss_pred --ccCCCcccccccccC---CCCch----------hhhhhhCCCCCCcchh
Q psy238 142 --IENKKYLSATRQTYG---RPISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 142 --~~~~~t~~y~aPE~~---~~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
....++..|+|||+. ..++. ++++++|+.||.....
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~ 224 (342)
T cd07854 174 YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE 224 (342)
T ss_pred ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 123567889999952 12211 7899999999976543
No 373
>KOG4257|consensus
Probab=99.90 E-value=1.9e-23 Score=177.92 Aligned_cols=154 Identities=21% Similarity=0.316 Sum_probs=130.8
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
-||||.++. ...+...+.|+.|..+|+.+.|||||+|+|+|.+.. +|+|||.++-|-|..||.... ..+
T Consensus 420 aVAvKtCK~---d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P-----~WivmEL~~~GELr~yLq~nk---~sL 488 (974)
T KOG4257|consen 420 AVAVKTCKT---DCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP-----MWIVMELAPLGELREYLQQNK---DSL 488 (974)
T ss_pred eeeeehhcc---CCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-----eeEEEecccchhHHHHHHhcc---ccc
Confidence 599999884 233556889999999999999999999999998864 899999999999999999865 359
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCccccccccc--C
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQTY--G 156 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~--~ 156 (218)
+..+...+++||+.||.|||+ .++|||||..+|||+.....+||+|||+++. ....-...|||||- .
T Consensus 489 ~l~tL~ly~~Qi~talaYLeS--krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf 566 (974)
T KOG4257|consen 489 PLRTLTLYCYQICTALAYLES--KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF 566 (974)
T ss_pred hHHHHHHHHHHHHHHHHHHHh--hchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccch
Confidence 999999999999999999999 7799999999999999999999999999986 23344678999995 3
Q ss_pred CCCch----------hhhhh-hCCCCCCc
Q psy238 157 RPISG----------QYEIV-TKTNNVTE 174 (218)
Q Consensus 157 ~~~~~----------~~ei~-tg~~p~~~ 174 (218)
..++. ++||+ -|..||.+
T Consensus 567 RrFTtASDVWMFgVCmWEIl~lGvkPfqg 595 (974)
T KOG4257|consen 567 RRFTTASDVWMFGVCMWEILSLGVKPFQG 595 (974)
T ss_pred hcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence 34444 46654 48889864
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.90 E-value=4.1e-23 Score=171.89 Aligned_cols=166 Identities=19% Similarity=0.200 Sum_probs=132.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|..||||++... .........+.+|+.+++.+.||||+.+++++..... ....+++|++|+ +++|.+++..
T Consensus 36 ~~~~~~~~aiK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 112 (343)
T cd07851 36 DTKTGRKVAIKKLSRP--FQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC 112 (343)
T ss_pred ECCCCcEEEEEecccc--cchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc
Confidence 3457889999988642 1223344667889999999999999999887765332 223589999998 6799998875
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----ccCCCcccccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----IENKKYLSATRQT 154 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE 154 (218)
.++++..++.++.|++.||.|||+ .||+|+||+|+||+++.++.++|+|||++.. ....++..|+|||
T Consensus 113 -----~~l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE 185 (343)
T cd07851 113 -----QKLSDDHIQFLVYQILRGLKYIHS--AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 185 (343)
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHH
Confidence 348999999999999999999999 7799999999999999999999999999875 2346788899999
Q ss_pred cCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 155 YGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+.. ..+. ++++++|..||.....
T Consensus 186 ~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~ 221 (343)
T cd07851 186 IMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH 221 (343)
T ss_pred HHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 632 1111 6899999999976543
No 375
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.90 E-value=9e-23 Score=164.45 Aligned_cols=164 Identities=21% Similarity=0.277 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+..+|..||+|++.... ........+..|+.+++.+.||||+++++++.+.. .+++||+|++ ++|.+++....
T Consensus 20 ~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~~v~e~~~-~~l~~~i~~~~ 92 (282)
T cd07829 20 DKKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTER----KLYLVFEYCD-MDLKKYLDKRP 92 (282)
T ss_pred ecCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC----ceEEEecCcC-cCHHHHHHhhc
Confidence 34578999999998542 12334456778999999999999999999987653 5899999996 69999998753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
..+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||.+.. ....++..|+||
T Consensus 93 ---~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aP 167 (282)
T cd07829 93 ---GPLSPNLIKSIMYQLLRGLAYCHS--HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAP 167 (282)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCCh
Confidence 348999999999999999999999 7799999999999999999999999998765 223446789999
Q ss_pred ccCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 154 TYGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 154 E~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
|+.. .++. ++++++|..||.....
T Consensus 168 E~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 204 (282)
T cd07829 168 EILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE 204 (282)
T ss_pred HHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 9632 2222 6899999999976554
No 376
>KOG0587|consensus
Probab=99.90 E-value=7e-23 Score=179.71 Aligned_cols=163 Identities=17% Similarity=0.206 Sum_probs=135.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
+..+|+.+|+|+.... ....+.+..|..+|+.. +|||++.++++|.-... .+..+|||||||.|||..+++..
T Consensus 40 ~~~~~~~aa~kI~~~~-----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn 114 (953)
T KOG0587|consen 40 HVKTGQLAAIKIMDPT-----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKN 114 (953)
T ss_pred eeecCceeeeEeecCC-----ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhh
Confidence 3567888999998854 22335567788888888 79999999998765433 35689999999999999999998
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSAT 151 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~ 151 (218)
..+ .++.+..+..+++.++.||.+||. +.++|||++=.|||+..++.++++|||++.. .+..||+.||
T Consensus 115 ~~g--~rl~E~~IaYI~re~lrgl~HLH~--nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WM 190 (953)
T KOG0587|consen 115 TKG--NRLKEEWIAYILREILRGLAHLHN--NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWM 190 (953)
T ss_pred hcc--cchhhHHHHHHHHHHHHHHHHHhh--cceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccc
Confidence 873 679999999999999999999999 7799999999999999999999999999865 7789999999
Q ss_pred ccccCC-------CCch----------hhhhhhCCCCCC
Q psy238 152 RQTYGR-------PISG----------QYEIVTKTNNVT 173 (218)
Q Consensus 152 aPE~~~-------~~~~----------~~ei~tg~~p~~ 173 (218)
|||+.. .++. +.|+.-|..|+.
T Consensus 191 APEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~ 229 (953)
T KOG0587|consen 191 APEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLC 229 (953)
T ss_pred cceeeecccCCCCCcccccchhhccceeehhcCCCCCcc
Confidence 999722 1111 577777888875
No 377
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.90 E-value=1.4e-22 Score=163.68 Aligned_cols=163 Identities=22% Similarity=0.247 Sum_probs=129.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..+|..||||.+.... . ........+|+..+..+. ||||+++++++.+.+ ..++||||+ +++|.+++....
T Consensus 21 ~~~~~~~~ik~~~~~~--~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~----~~~lv~e~~-~~~l~~~~~~~~ 92 (283)
T cd07830 21 KETGELVAIKKMKKKF--Y-SWEECMNLREVKSLRKLNEHPNIVKLKEVFREND----ELYFVFEYM-EGNLYQLMKDRK 92 (283)
T ss_pred CCCCcEEEEEEehhhc--c-chhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC----cEEEEEecC-CCCHHHHHHhcc
Confidence 4568899999886421 1 122334457889999998 999999999987743 689999999 789999887653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCcccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQT 154 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE 154 (218)
. ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+.. ....++..|+|||
T Consensus 93 ~--~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE 168 (283)
T cd07830 93 G--KPFSESVIRSIIYQILQGLAHIHK--HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPE 168 (283)
T ss_pred c--ccCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCce
Confidence 1 358999999999999999999999 7799999999999999999999999998865 2345688899999
Q ss_pred cCC---CCch----------hhhhhhCCCCCCcchh
Q psy238 155 YGR---PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 155 ~~~---~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+.. ..+. ++++++|..||.....
T Consensus 169 ~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~ 204 (283)
T cd07830 169 ILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSE 204 (283)
T ss_pred eeecCcCcCCccchhhHHHHHHHHHhCCCccCCCCh
Confidence 621 1111 7999999999976543
No 378
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.89 E-value=6.9e-23 Score=178.54 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHH
Q psy238 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN-VKKLPLSAWKRWCSQILSAL 103 (218)
Q Consensus 25 ~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l 103 (218)
....+.+|+.+|..++||||+++++++.... ..|+|++++. ++|..++....-. ........+..++.||+.||
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL 280 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEA----NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAV 280 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECC----eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHH
Confidence 4456789999999999999999999997754 5899999984 6888877543211 12234567788999999999
Q ss_pred HHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccccccC--CCCch----------h
Q psy238 104 SYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQTYG--RPISG----------Q 162 (218)
Q Consensus 104 ~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~~--~~~~~----------~ 162 (218)
.|||+ .+|+||||||+|||++.++.++|+|||++.. ....||..|+|||+. ..++. +
T Consensus 281 ~yLH~--~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 358 (501)
T PHA03210 281 EYIHD--KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358 (501)
T ss_pred HHHHh--CCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH
Confidence 99999 7799999999999999999999999999864 235689999999973 23322 6
Q ss_pred hhhhhCCCCC
Q psy238 163 YEIVTKTNNV 172 (218)
Q Consensus 163 ~ei~tg~~p~ 172 (218)
|+|++|..++
T Consensus 359 ~ell~~~~~p 368 (501)
T PHA03210 359 LDMLSHDFCP 368 (501)
T ss_pred HHHHHCCCCC
Confidence 8999887644
No 379
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.89 E-value=2.2e-22 Score=163.96 Aligned_cols=160 Identities=19% Similarity=0.226 Sum_probs=125.5
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
.+|..||||.+.... .......+..|+.++... .||||+++++++.+.. .+|+||+|+. ++|.+++....
T Consensus 38 ~~~~~~avK~~~~~~---~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~~v~e~~~-~~l~~l~~~~~- 108 (296)
T cd06618 38 KTGHVMAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS----DVFICMELMS-TCLDKLLKRIQ- 108 (296)
T ss_pred CCCeEEEEEEEeccC---ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC----eEEEEeeccC-cCHHHHHHHhc-
Confidence 468999999997432 123345566677766666 5999999999987644 5899999984 68888776643
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY 155 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~ 155 (218)
..+++..+..++.|++.||.|||+. .+|+|+||+|+||+++.++.++|+|||++.. ....++..|+|||+
T Consensus 109 --~~l~~~~~~~i~~~i~~~l~~lH~~-~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~ 185 (296)
T cd06618 109 --GPIPEDILGKMTVAIVKALHYLKEK-HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPER 185 (296)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhh-CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhh
Confidence 3589999999999999999999972 2699999999999999999999999998764 22346788999997
Q ss_pred CCCC------ch----------hhhhhhCCCCCCcc
Q psy238 156 GRPI------SG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 156 ~~~~------~~----------~~ei~tg~~p~~~~ 175 (218)
.... +. ++++++|..||...
T Consensus 186 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 221 (296)
T cd06618 186 IDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC 221 (296)
T ss_pred cCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence 4321 11 79999999999754
No 380
>KOG0671|consensus
Probab=99.89 E-value=3.1e-23 Score=167.57 Aligned_cols=164 Identities=16% Similarity=0.180 Sum_probs=135.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC--CCc----ccceeeeeecCCCCCCeEEEEEeccCCCCHHH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE--HPN----IVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ 75 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~--hp~----iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~ 75 (218)
|..++..||||++.. .....++...|+++|+++. .|+ +|.+.+||.-. +++|+|+|.+ |.|+.+
T Consensus 110 D~~~~~~vAlKIik~-----V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr----ghiCivfell-G~S~~d 179 (415)
T KOG0671|consen 110 DRETKEHVALKIIKN-----VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR----GHICIVFELL-GLSTFD 179 (415)
T ss_pred ecCCCceehHHHHHH-----HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc----CceEEEEecc-ChhHHH
Confidence 667789999999963 3678888999999999993 244 78888888654 4799999998 789999
Q ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC--------------------CcEEEee
Q psy238 76 FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN--------------------GLVKIGC 135 (218)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~--------------------~~~ki~d 135 (218)
++.... ..++|...++.++.|++.++.|||+ .+++|.||||+|||+.+. ..++|+|
T Consensus 180 Flk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~--~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vID 255 (415)
T KOG0671|consen 180 FLKENN--YIPFPIDHIRHMGYQLLESVAFLHD--LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVID 255 (415)
T ss_pred HhccCC--ccccchHHHHHHHHHHHHHHHHHHh--cceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEe
Confidence 998863 4779999999999999999999999 779999999999999532 3589999
Q ss_pred cCcccc-----ccCCCccccccccc--CCCCch----------hhhhhhCCCCCCcchhhh
Q psy238 136 DTYTHT-----IENKKYLSATRQTY--GRPISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 136 fg~~~~-----~~~~~t~~y~aPE~--~~~~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
||.++. .+.+.|-.|.|||+ +-+++. ++|+++|...|..-.+-|
T Consensus 256 FGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 256 FGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred cCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 999887 55688999999997 334433 799999999997665444
No 381
>KOG0603|consensus
Probab=99.89 E-value=2e-23 Score=178.02 Aligned_cols=158 Identities=18% Similarity=0.264 Sum_probs=127.3
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..++...++|++... .....+|+.++... .||||+.+.+++.+.. +.|+|||.+.|+-|.+.+...
T Consensus 343 ~~~t~~~~~vkii~~~--------~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~----~~~~v~e~l~g~ell~ri~~~ 410 (612)
T KOG0603|consen 343 SSPTDQEPAVKIISKR--------ADDNQDEIPISLLVRDHPNIVKSHDVYEDGK----EIYLVMELLDGGELLRRIRSK 410 (612)
T ss_pred ccccccchhheecccc--------ccccccccchhhhhcCCCcceeecceecCCc----eeeeeehhccccHHHHHHHhc
Confidence 5678888899988743 22345567666666 7999999999997754 699999999988888777654
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEE-ecCCcEEEeecCcccc-----ccCCCcccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFI-QHNGLVKIGCDTYTHT-----IENKKYLSATRQT 154 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl-~~~~~~ki~dfg~~~~-----~~~~~t~~y~aPE 154 (218)
. .....+..|+++|+.|+.|||+ +||+||||+|+|||+ +..++++|+|||.+.. .+.+-|..|.|||
T Consensus 411 ~-----~~~~e~~~w~~~lv~Av~~LH~--~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APE 483 (612)
T KOG0603|consen 411 P-----EFCSEASQWAAELVSAVDYLHE--QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPE 483 (612)
T ss_pred c-----hhHHHHHHHHHHHHHHHHHHHh--cCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChh
Confidence 3 2237778899999999999999 889999999999999 5889999999999876 2457789999999
Q ss_pred cCC--CCch----------hhhhhhCCCCCCcchhh
Q psy238 155 YGR--PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 155 ~~~--~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
++. .++. +|+|++|..||......
T Consensus 484 vl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 484 VLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred hhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 844 2222 79999999999766555
No 382
>KOG4278|consensus
Probab=99.88 E-value=6.6e-23 Score=174.79 Aligned_cols=158 Identities=22% Similarity=0.287 Sum_probs=130.5
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
..||||.++ .+ ......|+.|..+|+.+.|||+|+|+|+|....+ +|||+|||.+|+|.+||+.+.+ ..
T Consensus 293 lTvAVKtLK----ED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP----FYIiTEfM~yGNLLdYLRecnr--~e 361 (1157)
T KOG4278|consen 293 LTVAVKTLK----ED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP----FYIITEFMCYGNLLDYLRECNR--SE 361 (1157)
T ss_pred eeeehhhhh----hc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC----eEEEEecccCccHHHHHHHhch--hh
Confidence 568888886 22 4567789999999999999999999999987654 8999999999999999999865 55
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccccccccCC
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSATRQTYGR 157 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~~~ 157 (218)
++.-..+.++.||.+|+.||.. +++|||||...|.|++++..++++|||+++. ....-...|.|||-..
T Consensus 362 v~avvLlyMAtQIsSaMeYLEk--knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLA 439 (1157)
T KOG4278|consen 362 VPAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 439 (1157)
T ss_pred cchhHHHHHHHHHHHHHHHHHH--hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccccc
Confidence 8888888999999999999999 7799999999999999999999999999986 2223357899999522
Q ss_pred --CCch----------hhhhhh-CCCCCCcchh
Q psy238 158 --PISG----------QYEIVT-KTNNVTEKKK 177 (218)
Q Consensus 158 --~~~~----------~~ei~t-g~~p~~~~~~ 177 (218)
.++. ++||.| |..||.+...
T Consensus 440 yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl 472 (1157)
T KOG4278|consen 440 YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 472 (1157)
T ss_pred ccccccchhhHHHHHHHHHHHhcCCCCCCCccH
Confidence 2222 566654 7778876543
No 383
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.88 E-value=2.1e-21 Score=158.27 Aligned_cols=139 Identities=15% Similarity=0.109 Sum_probs=109.3
Q ss_pred HHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q psy238 32 VFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSP 111 (218)
Q Consensus 32 ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~ 111 (218)
+...+..+.|++|+.+++++..........+++++++. .++.+++.... ..++..+..++.|++.||.|||+ .
T Consensus 73 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~--~ 145 (294)
T PHA02882 73 LWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK----CKNKKLIKNIMKDMLTTLEYIHE--H 145 (294)
T ss_pred HHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhc----cCCHHHHHHHHHHHHHHHHHHHh--C
Confidence 34456677899999999876654433334578888874 57877776542 36788899999999999999999 7
Q ss_pred CcccCCCCCCcEEEecCCcEEEeecCcccc---------------ccCCCcccccccccC--CCCch----------hhh
Q psy238 112 PIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------------IENKKYLSATRQTYG--RPISG----------QYE 164 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------------~~~~~t~~y~aPE~~--~~~~~----------~~e 164 (218)
+|+||||||+|||++.++.++|+|||+++. ....||+.|+|||+. ..++. +++
T Consensus 146 ~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 146 GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred CeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 799999999999999999999999999753 124689999999973 22222 799
Q ss_pred hhhCCCCCCcchh
Q psy238 165 IVTKTNNVTEKKK 177 (218)
Q Consensus 165 i~tg~~p~~~~~~ 177 (218)
+++|..||.+...
T Consensus 226 l~~g~~P~~~~~~ 238 (294)
T PHA02882 226 WAGIKLPWKGFGH 238 (294)
T ss_pred HHhCCCCCCcccc
Confidence 9999999987643
No 384
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.88 E-value=2.4e-22 Score=187.38 Aligned_cols=152 Identities=21% Similarity=0.323 Sum_probs=120.8
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||||.+..... ....|+.+++.++|||||+++++|.+.. ..|+||||+++++|.+++..
T Consensus 712 ~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~~~~~~----~~~lv~Ey~~~g~L~~~l~~--- 776 (968)
T PLN00113 712 IKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGLCRSEK----GAYLIHEYIEGKNLSEVLRN--- 776 (968)
T ss_pred CCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEEEEcCC----CCEEEEeCCCCCcHHHHHhc---
Confidence 46789999998863211 1123578899999999999999997754 47999999999999999952
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccCC
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYGR 157 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~~ 157 (218)
+++..+..++.|++.||.|||+ +..+|+||||+|+||+++.++.+++. ++.... ....+++.|+|||+..
T Consensus 777 ----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~ 851 (968)
T PLN00113 777 ----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRE 851 (968)
T ss_pred ----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCccccc
Confidence 7889999999999999999994 12679999999999999988877765 444332 3456789999999733
Q ss_pred --CCch----------hhhhhhCCCCCCc
Q psy238 158 --PISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 158 --~~~~----------~~ei~tg~~p~~~ 174 (218)
.++. +|||+||+.||+.
T Consensus 852 ~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 852 TKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 2222 7999999999954
No 385
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.88 E-value=5.8e-22 Score=158.27 Aligned_cols=165 Identities=22% Similarity=0.263 Sum_probs=127.2
Q ss_pred CCcEEEEEEeeccccc-ccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~-~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
++..+++|++...... ........+..|+.++..++||||+++++++.+.. ..++||||+++++|.+++......
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~ 99 (260)
T cd08222 24 AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----AFCIITEYCEGRDLDCKLEELKHT 99 (260)
T ss_pred CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC----ceEEEEEeCCCCCHHHHHHHHhhc
Confidence 3445566665532111 11233445677899999999999999999886643 589999999999999998765444
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQTY 155 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aPE~ 155 (218)
...+++..++.++.|++.||.|||+ .+++|+||+|+||+++. +.++|+|||++.. ....++..|+|||.
T Consensus 100 ~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~ 176 (260)
T cd08222 100 GKTLSENQVCEWFIQLLLGVHYMHQ--RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEA 176 (260)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHH--cCccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHH
Confidence 4569999999999999999999999 77999999999999975 5699999998764 24557888999996
Q ss_pred C--CCCch----------hhhhhhCCCCCCcch
Q psy238 156 G--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 156 ~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
. ..++. ++++++|..||....
T Consensus 177 ~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~ 209 (260)
T cd08222 177 LKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN 209 (260)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 2 22221 688999999997543
No 386
>KOG0665|consensus
Probab=99.88 E-value=1.4e-23 Score=166.21 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=135.5
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC--CCCeEEEEEeccCCCCHHHHHH
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRVIFITEYMSSGSLKQFLK 78 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~ 78 (218)
.|..+++.||+|.+... ..+ .....+..+|..++..+.|+||+.++.+|.-... ....+|+|||+|. ++|..++.
T Consensus 36 ~D~v~~~~v~ikk~~~p-f~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~ 112 (369)
T KOG0665|consen 36 FDQVLGRPVAIKKLSRP-FQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVIL 112 (369)
T ss_pred chhhccCceehhhhcCc-ccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHH
Confidence 47788999999988754 333 4556788999999999999999999999864221 2235899999995 79999998
Q ss_pred hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccc
Q psy238 79 RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSAT 151 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~ 151 (218)
.. ++-.++..++.|++.|+.|||+ .||+||||||+||++..++.++|.|||++.. +....|..|.
T Consensus 113 ~e------lDH~tis~i~yq~~~~ik~lhs--~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyr 184 (369)
T KOG0665|consen 113 ME------LDHETISYILYQMLCGIKHLHS--AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYR 184 (369)
T ss_pred Hh------cchHHHHHHHHHHHHHHHHHHh--cceeecccCcccceecchhheeeccchhhcccCcccccCchhheeecc
Confidence 43 6778899999999999999999 7799999999999999999999999999876 4567788999
Q ss_pred cccc--CCCCch----------hhhhhhCCCCCCcch
Q psy238 152 RQTY--GRPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 152 aPE~--~~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
|||+ +..+.. +.||++|..-|.+..
T Consensus 185 apevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d 221 (369)
T KOG0665|consen 185 APEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD 221 (369)
T ss_pred CchheeccCCcccchhhhhhhHHHHHhhceEEecCch
Confidence 9996 443333 678888888887553
No 387
>KOG1027|consensus
Probab=99.88 E-value=5.7e-23 Score=179.46 Aligned_cols=160 Identities=20% Similarity=0.164 Sum_probs=122.2
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
-.|++||||++- ......+++||..|+.. .|||||++++.-.+ ..++|+..|.|. .+|.+++.....
T Consensus 531 ye~R~VAVKrll-------~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d----~qF~YIalELC~-~sL~dlie~~~~ 598 (903)
T KOG1027|consen 531 YEGREVAVKRLL-------EEFFDFAQREIQLLQESDEHPNVIRYYCSEQD----RQFLYIALELCA-CSLQDLIESSGL 598 (903)
T ss_pred eCCceehHHHHh-------hHhHHHHHHHHHHHHhccCCCceEEEEeeccC----CceEEEEehHhh-hhHHHHHhcccc
Confidence 468899999886 45666789999999888 79999999765433 357999999995 899999987411
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec---C--CcEEEeecCcccc-----------ccCCC
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH---N--GLVKIGCDTYTHT-----------IENKK 146 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~---~--~~~ki~dfg~~~~-----------~~~~~ 146 (218)
......-...+..+.|++.||.+||+++ ||||||||.||||+. + ..++|+|||+|.. .+..|
T Consensus 599 d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sG 676 (903)
T KOG1027|consen 599 DVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSG 676 (903)
T ss_pred chhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCC
Confidence 1111111345778999999999999966 999999999999976 2 5789999998865 56789
Q ss_pred cccccccccCC--CCch-----------hhhhhhCCCCCCcchh
Q psy238 147 YLSATRQTYGR--PISG-----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 147 t~~y~aPE~~~--~~~~-----------~~ei~tg~~p~~~~~~ 177 (218)
|.+|+|||+.. ..+. .|-+-.|..||.....
T Consensus 677 t~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~ 720 (903)
T KOG1027|consen 677 TSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE 720 (903)
T ss_pred cccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH
Confidence 99999999722 1111 3445556899975543
No 388
>KOG0596|consensus
Probab=99.88 E-value=2.1e-22 Score=169.37 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=127.4
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
...||+|.+... .........+.+||..|.++ .|.+||+|+++-.. .+++|||||+= ..+|..+|......
T Consensus 385 ~~iyalkkv~~~--~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~----d~~lYmvmE~G-d~DL~kiL~k~~~~- 456 (677)
T KOG0596|consen 385 KQIYALKKVVLL--EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT----DGYLYMVMECG-DIDLNKILKKKKSI- 456 (677)
T ss_pred CcchhhhHHHHh--hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc----CceEEEEeecc-cccHHHHHHhccCC-
Confidence 456788877654 33367788999999999999 68999999988655 34799999986 57999999987642
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCcccccccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQT 154 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE 154 (218)
.+.-.++.+..||+.|+.++|. .||||.||||.|+|+- .|.+||+|||++.. ..-+||+.||+||
T Consensus 457 --~~~~~lk~ywkqML~aV~~IH~--~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPE 531 (677)
T KOG0596|consen 457 --DPDWFLKFYWKQMLLAVKTIHQ--HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPE 531 (677)
T ss_pred --CchHHHHHHHHHHHHHHHHHHH--hceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHH
Confidence 4434788899999999999999 7899999999999984 58999999999865 5679999999999
Q ss_pred cCCC--C---------------------chhhhhhhCCCCCCcc
Q psy238 155 YGRP--I---------------------SGQYEIVTKTNNVTEK 175 (218)
Q Consensus 155 ~~~~--~---------------------~~~~ei~tg~~p~~~~ 175 (218)
-... . +.+|.|+-|+.||...
T Consensus 532 Al~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~ 575 (677)
T KOG0596|consen 532 ALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI 575 (677)
T ss_pred HHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH
Confidence 4110 0 1179999999999744
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.88 E-value=1.2e-21 Score=153.56 Aligned_cols=160 Identities=26% Similarity=0.355 Sum_probs=133.1
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|..||+|++...... .....+.+|+.+++.++|+||+++++++.... ..+++++++++++|.+++....
T Consensus 11 ~~~~~~~~~k~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~l~~e~~~~~~L~~~~~~~~- 82 (244)
T smart00220 11 KKTGKLVAIKVIKKEKIK---KKRERILREISILKKLKHPNIVRLYDVFEDED----KLYLVMEYCDGGDLFDLLKKRG- 82 (244)
T ss_pred CCCCcEEEEEEecccccc---cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC----EEEEEEeCCCCCCHHHHHHhcc-
Confidence 347899999999854222 11578889999999999999999999987643 5899999998889999997653
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY 155 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~ 155 (218)
.++...++.++.+++.++.+||+ .+++|+||+|.||+++.++.++|+|||.+.. ....++..|++||.
T Consensus 83 ---~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 83 ---RLSEDEARFYARQILSALEYLHS--NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHH--cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 28899999999999999999999 7799999999999999999999999998775 34567889999996
Q ss_pred CC--CCch----------hhhhhhCCCCCCcc
Q psy238 156 GR--PISG----------QYEIVTKTNNVTEK 175 (218)
Q Consensus 156 ~~--~~~~----------~~ei~tg~~p~~~~ 175 (218)
.. ..+. ++++++|..||...
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~ 189 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGD 189 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 32 2222 68899999999763
No 390
>KOG0664|consensus
Probab=99.87 E-value=4.6e-24 Score=166.41 Aligned_cols=158 Identities=18% Similarity=0.256 Sum_probs=125.0
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCC-CCeEEEEEeccCCCCHHHHHHh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND-KPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
.|..+|+.||+|.+..- ........++.+|+.+|..+.|.|++..+++..-...+ ...+|+++|.|. .+|..+|-.
T Consensus 73 TDPRdgrrvalkK~pnv--fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVS 149 (449)
T KOG0664|consen 73 TDPRSGKRVALKKMPNV--FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVS 149 (449)
T ss_pred cCCCCccchhHhhcchH--HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheecc
Confidence 37789999999987632 33345667899999999999999999988776543321 123678889885 688887764
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------ccCCCcccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IENKKYLSA 150 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~~~~t~~y 150 (218)
. .+++.+.+.-+++||+.||.|||+ .+|+||||||.|+|++.+..++|||||+++. .....|-.|
T Consensus 150 P----Q~Ls~DHvKVFlYQILRGLKYLHs--A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYY 223 (449)
T KOG0664|consen 150 P----QALTPDHVKVFVYQILRGLKYLHT--ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYY 223 (449)
T ss_pred C----CCCCcchhhhhHHHHHhhhHHHhh--cchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHh
Confidence 3 569999999999999999999999 6699999999999999999999999999986 445668899
Q ss_pred ccccc---CCCCchhhhhhh
Q psy238 151 TRQTY---GRPISGQYEIVT 167 (218)
Q Consensus 151 ~aPE~---~~~~~~~~ei~t 167 (218)
.|||+ ...++.+.||||
T Consensus 224 RAPEiLMGaRhYs~AvDiWS 243 (449)
T KOG0664|consen 224 RAPELLMGARRYTGAVDIWS 243 (449)
T ss_pred ccHHHhhcchhhcCccceeh
Confidence 99997 224455444443
No 391
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=6.6e-21 Score=158.58 Aligned_cols=132 Identities=11% Similarity=-0.022 Sum_probs=99.9
Q ss_pred CCcEEEEEEeecccc-cccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSER-KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~-~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
+|..||||.+..... .........+.+|+.+|..++|+|++..+..+ +..|+||||++|++|.. +..
T Consensus 43 ~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-------~~~~LVmE~~~G~~L~~-~~~---- 110 (365)
T PRK09188 43 PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-------GKDGLVRGWTEGVPLHL-ARP---- 110 (365)
T ss_pred CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-------CCcEEEEEccCCCCHHH-hCc----
Confidence 677889998752211 01234566789999999999999998633222 13799999999999962 210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCC-CCCcEEEecCCcEEEeecCcccc----------------ccCCC
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNL-TCDTIFIQHNGLVKIGCDTYTHT----------------IENKK 146 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dl-kp~NiLl~~~~~~ki~dfg~~~~----------------~~~~~ 146 (218)
.. ...++.|++.||.|||+ +||+|||| ||+|||++.++.++|+|||+++. ....+
T Consensus 111 ---~~---~~~~~~~i~~aL~~lH~--~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~ 182 (365)
T PRK09188 111 ---HG---DPAWFRSAHRALRDLHR--AGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLK 182 (365)
T ss_pred ---cc---hHHHHHHHHHHHHHHHH--CCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhc
Confidence 11 14678899999999999 77999999 99999999999999999999874 23455
Q ss_pred cccccccccC
Q psy238 147 YLSATRQTYG 156 (218)
Q Consensus 147 t~~y~aPE~~ 156 (218)
++.|+|||+.
T Consensus 183 ~~~~~~pe~~ 192 (365)
T PRK09188 183 HKRTYAPDAL 192 (365)
T ss_pred cCccCCcccC
Confidence 6778899973
No 392
>KOG0668|consensus
Probab=99.85 E-value=2.7e-21 Score=147.45 Aligned_cols=159 Identities=16% Similarity=0.183 Sum_probs=125.5
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+.+.++||+++ +.....+.+|+.||+.+. ||||+.|+++..++. +....+|+|++.+.+...+..
T Consensus 59 ~~~~~eK~ViKiLK-------PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~--SktpaLiFE~v~n~Dfk~ly~-- 127 (338)
T KOG0668|consen 59 NITNNEKCVIKILK-------PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE--SKTPSLIFEYVNNTDFKQLYP-- 127 (338)
T ss_pred ccCCCceEEEeeec-------hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc--ccCchhHhhhhccccHHHHhh--
Confidence 44677889999998 567778999999999995 999999999988754 345679999998877766553
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc-------ccCCCcccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT-------IENKKYLSATR 152 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~-------~~~~~t~~y~a 152 (218)
.++...+..++.+++.||.|||| .||+|||+||.|++||.. -.++|+|+|++.. .....+..|--
T Consensus 128 -----tl~d~dIryY~~elLkALdyCHS--~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKG 200 (338)
T KOG0668|consen 128 -----TLTDYDIRYYIYELLKALDYCHS--MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 200 (338)
T ss_pred -----hhchhhHHHHHHHHHHHHhHHHh--cCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCC
Confidence 27778899999999999999999 779999999999999875 6799999999976 33455666778
Q ss_pred cccCC---CCch----------hhhhhhCCCCCCcchhh
Q psy238 153 QTYGR---PISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 153 PE~~~---~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
||+.- .++. +..|+-.+.||-...+.
T Consensus 201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN 239 (338)
T KOG0668|consen 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 239 (338)
T ss_pred chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence 99632 2222 45566677888654443
No 393
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.85 E-value=3.6e-20 Score=144.00 Aligned_cols=159 Identities=26% Similarity=0.343 Sum_probs=131.0
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++..+|+|.+...... .....+.+|+..+..++|+|++++++++.... ..+++++++++++|.+++.....
T Consensus 22 ~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~----~~~~v~e~~~~~~L~~~~~~~~~- 93 (225)
T smart00221 22 GTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPE----PLYLVMEYCEGGDLFDYLRKKGG- 93 (225)
T ss_pred CCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCC----ceEEEEeccCCCCHHHHHHhccc-
Confidence 35789999999853211 25678889999999999999999999886643 58999999998899999986532
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc---------cCCCcccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI---------ENKKYLSATRQT 154 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~---------~~~~t~~y~aPE 154 (218)
.+++..++.++.+++.+|.+||+ .+++|+||+|.||+++.++.++|+|||.+... ...++..|++||
T Consensus 94 --~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe 169 (225)
T smart00221 94 --KLSEEEARFYLRQILEALEYLHS--LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPE 169 (225)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHh
Confidence 17889999999999999999999 67999999999999999999999999987652 235677899999
Q ss_pred cC---CCCch----------hhhhhhCCCCCCc
Q psy238 155 YG---RPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 155 ~~---~~~~~----------~~ei~tg~~p~~~ 174 (218)
.. .+++. ++++++|+.||.+
T Consensus 170 ~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 170 VLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred HhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 75 12211 6999999999966
No 394
>KOG1290|consensus
Probab=99.85 E-value=5.4e-21 Score=158.89 Aligned_cols=117 Identities=26% Similarity=0.444 Sum_probs=105.1
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-----CC---cccceeeeeecCCCCCCeEEEEEeccCCCCH
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-----HP---NIVKFHRYWTDTHNDKPRVIFITEYMSSGSL 73 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-----hp---~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL 73 (218)
|+++.+.||+|+++ +.....+..+.||.+|++++ |+ .||+|++.|...++++.|+|||||++ |.+|
T Consensus 99 Dtq~~r~VAlKVvK-----SAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnL 172 (590)
T KOG1290|consen 99 DTQNKRYVALKVVK-----SAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNL 172 (590)
T ss_pred eccCCeEEEEEEEe-----hhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHH
Confidence 78889999999996 33778899999999999984 33 39999999999999999999999999 7899
Q ss_pred HHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecC
Q psy238 74 KQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHN 128 (218)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~ 128 (218)
..+|..... ..+|...+..|++||+.||.|||+ |+ |||.||||+|||+..+
T Consensus 173 LklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 173 LKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLLCST 224 (590)
T ss_pred HHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeeeecc
Confidence 999998854 669999999999999999999999 87 9999999999998554
No 395
>KOG0199|consensus
Probab=99.85 E-value=2.3e-21 Score=167.09 Aligned_cols=162 Identities=19% Similarity=0.223 Sum_probs=131.4
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKL 87 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 87 (218)
.||||.+.... -......|++|+.+|..|+|||+++|||+..+.. +.||||+++.|||.+.|+.... ..|
T Consensus 140 ~VAVKclr~d~---l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp-----~mMV~ELaplGSLldrLrka~~--~~l 209 (1039)
T KOG0199|consen 140 NVAVKCLRDDS---LNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQP-----AMMVFELAPLGSLLDRLRKAKK--AIL 209 (1039)
T ss_pred eEEEEeccCCc---cchhHHHHHHHHHHHHhccCcceeEEeeeeccch-----hhHHhhhcccchHHHHHhhccc--cce
Confidence 59999998431 1237789999999999999999999999998743 7899999999999999998332 568
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------ccCCCccccccccc-
Q psy238 88 PLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------IENKKYLSATRQTY- 155 (218)
Q Consensus 88 ~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------~~~~~t~~y~aPE~- 155 (218)
.......|+.||+.|+.||.+ +++|||||-..|+|+...-.+||+|||+.+. ....-.+.|+|||.
T Consensus 210 lv~~Lcdya~QiA~aM~YLes--krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsL 287 (1039)
T KOG0199|consen 210 LVSRLCDYAMQIAKAMQYLES--KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESL 287 (1039)
T ss_pred eHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHh
Confidence 889999999999999999999 8899999999999999999999999999887 22334678999995
Q ss_pred -CCCCch----------hhhhhh-CCCCCCcchhhhhH
Q psy238 156 -GRPISG----------QYEIVT-KTNNVTEKKKEKEE 181 (218)
Q Consensus 156 -~~~~~~----------~~ei~t-g~~p~~~~~~ee~~ 181 (218)
...|+. ++||+| |..||.+..--...
T Consensus 288 rh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL 325 (1039)
T KOG0199|consen 288 RHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQIL 325 (1039)
T ss_pred ccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHH
Confidence 223333 677776 55677665544433
No 396
>KOG0576|consensus
Probab=99.83 E-value=8.3e-22 Score=168.82 Aligned_cols=140 Identities=23% Similarity=0.258 Sum_probs=123.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+|...|+|+++..-. .....+++||-++...+|||||.|++.|...+ .+|++||||.||+|.+.-+-.
T Consensus 36 d~~s~elaavkvVkLep~----dd~~~iqqei~~~~dc~h~nivay~gsylr~d----klwicMEycgggslQdiy~~T- 106 (829)
T KOG0576|consen 36 DKRSGELAAVKVVKLEPG----DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD----KLWICMEYCGGGSLQDIYHVT- 106 (829)
T ss_pred ccccCchhhheeeeccCC----ccccccccceeeeecCCCcChHHHHhhhhhhc----CcEEEEEecCCCcccceeeec-
Confidence 678999999999996532 33456788999999999999999999987654 589999999999999987765
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc--------ccCCCccccccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT--------IENKKYLSATRQ 153 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~--------~~~~~t~~y~aP 153 (218)
+++++.++-..++..+.||.|||+ .+-+|||||=.|||+.+.|.++++|||.+.. ....||+.||||
T Consensus 107 ---gplselqiayvcRetl~gl~ylhs--~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmap 181 (829)
T KOG0576|consen 107 ---GPLSELQIAYVCRETLQGLKYLHS--QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAP 181 (829)
T ss_pred ---ccchhHHHHHHHhhhhccchhhhc--CCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccch
Confidence 459999999999999999999999 6699999999999999999999999998765 678999999999
Q ss_pred cc
Q psy238 154 TY 155 (218)
Q Consensus 154 E~ 155 (218)
|+
T Consensus 182 Ev 183 (829)
T KOG0576|consen 182 EV 183 (829)
T ss_pred hH
Confidence 97
No 397
>KOG0200|consensus
Probab=99.82 E-value=1e-19 Score=161.63 Aligned_cols=162 Identities=20% Similarity=0.278 Sum_probs=130.1
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc---
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK--- 81 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--- 81 (218)
...||||.+... .+ ......+..|+.+|..+ .||||+.++|++...+ .+++|+||+..|+|.++++..+
T Consensus 328 ~~~VaVK~~k~~--~~-~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~----~~~~v~Ey~~~G~L~~~Lr~~r~~~ 400 (609)
T KOG0200|consen 328 YVTVAVKMLKEN--AS-SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG----PLYVIVEYAEHGDLLEFLRKKRVTE 400 (609)
T ss_pred eEEEEEEecccc--cC-cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC----ceEEEEEeccCCcHHHHHHhccccc
Confidence 467999999843 22 36778899999999999 6999999999998743 5899999999999999999876
Q ss_pred c---c----C--CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------cc
Q psy238 82 R---N----V--KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------IE 143 (218)
Q Consensus 82 ~---~----~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------~~ 143 (218)
. + . ..++....+.++.||+.|++||++ .++|||||..+|||+..+..++|+|||+++. ..
T Consensus 401 ~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~--~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~ 478 (609)
T KOG0200|consen 401 SIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS--VPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKS 478 (609)
T ss_pred cccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh--CCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecC
Confidence 0 0 0 138889999999999999999999 7799999999999999999999999999984 11
Q ss_pred CC--CcccccccccCC--CCch----------hhhhhh-CCCCCCcch
Q psy238 144 NK--KYLSATRQTYGR--PISG----------QYEIVT-KTNNVTEKK 176 (218)
Q Consensus 144 ~~--~t~~y~aPE~~~--~~~~----------~~ei~t-g~~p~~~~~ 176 (218)
.. -...|||||... .++. ++||+| |..||.+..
T Consensus 479 ~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 479 SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 22 234599999633 2222 688776 667777643
No 398
>KOG1345|consensus
Probab=99.82 E-value=1.8e-20 Score=146.12 Aligned_cols=157 Identities=17% Similarity=0.205 Sum_probs=121.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+..+...+|+|.++.. ......|.+|+.---.| .|.||+.-|++..... +.+++++||++.|+|.+-+...
T Consensus 45 Hr~s~t~ivlKavp~p-----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~---d~YvF~qE~aP~gdL~snv~~~ 116 (378)
T KOG1345|consen 45 HRQSKTRIVLKAVPRP-----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS---DAYVFVQEFAPRGDLRSNVEAA 116 (378)
T ss_pred ccCCceEEEeeccCcc-----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcC---ceEEEeeccCccchhhhhcCcc
Confidence 3567788999998743 34556788888765555 6899999877644332 2678999999999999887653
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEe--cCCcEEEeecCccccc-----cCCCccccccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQ--HNGLVKIGCDTYTHTI-----ENKKYLSATRQ 153 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~--~~~~~ki~dfg~~~~~-----~~~~t~~y~aP 153 (218)
.+.+.....++.|+++||.|||+ .++||||||.+||||. +...++|||||.++.. ....+..|.+|
T Consensus 117 -----GigE~~~K~v~~ql~SAi~fMHs--knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~p 189 (378)
T KOG1345|consen 117 -----GIGEANTKKVFAQLLSAIEFMHS--KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAP 189 (378)
T ss_pred -----cccHHHHHHHHHHHHHHHHHhhc--cchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCc
Confidence 38889999999999999999999 6799999999999994 3468999999998762 23446788899
Q ss_pred ccCC----------CCch-------hhhhhhCCCCCC
Q psy238 154 TYGR----------PISG-------QYEIVTKTNNVT 173 (218)
Q Consensus 154 E~~~----------~~~~-------~~ei~tg~~p~~ 173 (218)
|+.. +.+. .|-++||..||.
T Consensus 190 e~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 190 ELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred HHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 8622 1111 577899999996
No 399
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=8.6e-20 Score=139.81 Aligned_cols=124 Identities=13% Similarity=0.094 Sum_probs=91.5
Q ss_pred CCcEEEEEEeecccccccH----------------------HHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEE
Q psy238 5 EGVEVVWNEVQFSERKNFK----------------------AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVI 62 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~----------------------~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~ 62 (218)
+|+.||||++......... ........|+.++..+.++++.....+... ..+
T Consensus 20 ~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~~~~------~~~ 93 (190)
T cd05147 20 NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPILLK------SHV 93 (190)
T ss_pred CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEEEec------CCE
Confidence 7999999999853211000 011233459999999988877443332211 138
Q ss_pred EEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 63 FITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYL-HSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 63 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l-H~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
+||||++|+++...+... .+++...+..++.|++.+|.++ |+ .||+||||||+|||++ ++.++|+|||++..
T Consensus 94 iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H~--~giiHrDlkP~NIli~-~~~v~LiDFG~a~~ 166 (190)
T cd05147 94 LVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQD--CRLVHADLSEYNLLYH-DGKLYIIDVSQSVE 166 (190)
T ss_pred EEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEE-CCcEEEEEcccccc
Confidence 999999887766543322 3488999999999999999999 68 6699999999999998 57899999999875
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.82 E-value=7.5e-19 Score=134.34 Aligned_cols=141 Identities=29% Similarity=0.386 Sum_probs=119.6
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+|..+++|++..... ......+.+|+..+..+.|++|+++++++.... ..+++|+++++++|.+++....
T Consensus 16 ~~~~~~~~K~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~-- 86 (215)
T cd00180 16 KTGKKVAIKIIKKEDS---SSLLEELLREIEILKKLNHPNIVKLYGVFEDEN----HLYLVMEYCEGGSLKDLLKENE-- 86 (215)
T ss_pred CCCcEEEEEEeccccc---hhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC----eEEEEEecCCCCcHHHHHHhcc--
Confidence 3589999999985321 114567899999999999999999999987653 5899999998899999998652
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-CCcEEEeecCccccc--------cCCCcccccccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHTI--------ENKKYLSATRQT 154 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~~--------~~~~t~~y~aPE 154 (218)
..++...++.++.+++.+|.+||+ .+++|+||+|.||+++. ++.++|+|||.+... ...+...|++||
T Consensus 87 -~~~~~~~~~~~~~~l~~~l~~lh~--~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe 163 (215)
T cd00180 87 -GKLSEDEILRILLQILEGLEYLHS--NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPE 163 (215)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChh
Confidence 248899999999999999999999 77999999999999999 899999999988752 245788899999
Q ss_pred cC
Q psy238 155 YG 156 (218)
Q Consensus 155 ~~ 156 (218)
..
T Consensus 164 ~~ 165 (215)
T cd00180 164 VL 165 (215)
T ss_pred Hh
Confidence 73
No 401
>KOG1025|consensus
Probab=99.81 E-value=4.9e-20 Score=161.28 Aligned_cols=161 Identities=16% Similarity=0.238 Sum_probs=131.6
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKK 86 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~ 86 (218)
.+||+|++.. .........++.|.-+|..+.|||+++|++++..+. +-||++|+++|+|.++++.+++ .
T Consensus 726 ipVaiKvl~~---~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-----~qlvtq~mP~G~LlDyvr~hr~---~ 794 (1177)
T KOG1025|consen 726 IPVAIKVLIE---FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-----LQLVTQLMPLGCLLDYVREHRD---N 794 (1177)
T ss_pred ceeEEEEeec---cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----HHHHHHhcccchHHHHHHHhhc---c
Confidence 5799999874 333556778999999999999999999999998754 7899999999999999999764 4
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccccccc-
Q psy238 87 LPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTY- 155 (218)
Q Consensus 87 ~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~- 155 (218)
+.....+.|..||+.|+.|||. ++++||||-.+|+||..-..++|.|||++.. ....-.+.|||-|.
T Consensus 795 igsq~lLnw~~QIAkgM~YLe~--qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i 872 (1177)
T KOG1025|consen 795 IGSQDLLNWCYQIAKGMKYLEE--QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESI 872 (1177)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh--cchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHh
Confidence 8889999999999999999999 8899999999999999999999999999876 12233455666663
Q ss_pred -CCCCch----------hhhhhh-CCCCCCcchhhhh
Q psy238 156 -GRPISG----------QYEIVT-KTNNVTEKKKEKE 180 (218)
Q Consensus 156 -~~~~~~----------~~ei~t-g~~p~~~~~~ee~ 180 (218)
...++. .+|++| |..|+.+..-+|.
T Consensus 873 ~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI 909 (1177)
T KOG1025|consen 873 RIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI 909 (1177)
T ss_pred hccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh
Confidence 223333 456554 8899988877664
No 402
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.80 E-value=5.4e-19 Score=152.94 Aligned_cols=150 Identities=17% Similarity=0.157 Sum_probs=106.1
Q ss_pred CCCcEEEEEEeecccccc---c-------HHHHHHHHHHHHHhhcCCCCc-----ccceeeeeecCC----CCCCeEEEE
Q psy238 4 EEGVEVVWNEVQFSERKN---F-------KAQEEKIQQVFENLTQLEHPN-----IVKFHRYWTDTH----NDKPRVIFI 64 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~---~-------~~~~~~~~~ei~~l~~l~hp~-----iv~l~~~~~~~~----~~~~~~~lv 64 (218)
..++.||||.+....... + ....+....|+.++..++|.+ ++.++++|.... ...+..++|
T Consensus 184 ~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV 263 (507)
T PLN03224 184 QKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLV 263 (507)
T ss_pred ccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEE
Confidence 456789999987421100 0 001122334666677775554 466777765421 123458999
Q ss_pred EeccCCCCHHHHHHhhcccC--------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEE
Q psy238 65 TEYMSSGSLKQFLKRTKRNV--------------------KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIF 124 (218)
Q Consensus 65 ~e~~~~~sL~~~l~~~~~~~--------------------~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiL 124 (218)
|+|+++++|.+++....... ..+++..++.++.|++.||.|||+ .+|+||||+|+|||
T Consensus 264 ~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~--~~ivHrDLKp~NIL 341 (507)
T PLN03224 264 WKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHR--IGIVHRDIKPENLL 341 (507)
T ss_pred EEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCchHhEE
Confidence 99999999999987532110 124567888999999999999999 77999999999999
Q ss_pred EecCCcEEEeecCcccc---------ccCCCccccccccc
Q psy238 125 IQHNGLVKIGCDTYTHT---------IENKKYLSATRQTY 155 (218)
Q Consensus 125 l~~~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~ 155 (218)
++.++.++|+|||++.. ....+++.|+|||.
T Consensus 342 l~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 342 VTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE 381 (507)
T ss_pred ECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence 99999999999998854 11234789999996
No 403
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.8e-19 Score=134.89 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=93.5
Q ss_pred CCcEEEEEEeeccccccc----------------------HHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEE
Q psy238 5 EGVEVVWNEVQFSERKNF----------------------KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVI 62 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~----------------------~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~ 62 (218)
+|..||||++........ ......+..|+..+..+.++++.....+... ..+
T Consensus 20 ~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~------~~~ 93 (190)
T cd05145 20 DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLK------KNV 93 (190)
T ss_pred CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEec------CCE
Confidence 799999999986421100 0112334678999999999987554443322 138
Q ss_pred EEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 63 FITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 63 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
+||||++|+++...+... .+++...+..++.|++.++.++|+ .+ |+||||+|+|||++ ++.++|+|||++..
T Consensus 94 lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~~~~~liDFG~a~~ 166 (190)
T cd05145 94 LVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-DGKPYIIDVSQAVE 166 (190)
T ss_pred EEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-CCCEEEEEccccee
Confidence 999999877554432222 237788999999999999999998 66 99999999999999 89999999999875
Q ss_pred c
Q psy238 142 I 142 (218)
Q Consensus 142 ~ 142 (218)
.
T Consensus 167 ~ 167 (190)
T cd05145 167 L 167 (190)
T ss_pred c
Confidence 4
No 404
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=9.4e-19 Score=135.65 Aligned_cols=122 Identities=16% Similarity=0.194 Sum_probs=91.8
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-----CCCcccceeeeeecCCCCCCeEE-EEEec--cCCCCHH
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-----EHPNIVKFHRYWTDTHNDKPRVI-FITEY--MSSGSLK 74 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-----~hp~iv~l~~~~~~~~~~~~~~~-lv~e~--~~~~sL~ 74 (218)
..++.. +||++.... ......+.+|+.++..+ .||||+++++++.+... .+.++ +|||| +.+++|.
T Consensus 22 p~~~~k-~IKv~~~~~----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g-~g~v~~~I~e~~G~~~~tL~ 95 (210)
T PRK10345 22 PEDAQR-CIKIVYHRG----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG-TGYVYDVIADFDGKPSITLT 95 (210)
T ss_pred CCCcCe-EEEEEeccc----cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC-CeEEEEEEecCCCCcchhHH
Confidence 345555 688886421 22446789999999999 57999999999987532 23434 78999 5578999
Q ss_pred HHHHhhcccCCCCCHHHHHHHHHHHHHHH-HHhhcCCCCcccCCCCCCcEEEec----CCcEEEeecCcc
Q psy238 75 QFLKRTKRNVKKLPLSAWKRWCSQILSAL-SYLHSCSPPIIHGNLTCDTIFIQH----NGLVKIGCDTYT 139 (218)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~qi~~~l-~~lH~~~~~iiH~dlkp~NiLl~~----~~~~ki~dfg~~ 139 (218)
+++... .+++. ..++.|++.++ .|||+ ++|+||||||+|||++. ++.++|+|++.+
T Consensus 96 ~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh~--~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 96 EFAEQC-----RYEED--VAQLRQLLKKLKRYLLD--NRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHcc-----cccHh--HHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 999653 25555 35678888888 89999 78999999999999974 348999995544
No 405
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.78 E-value=8.1e-19 Score=154.64 Aligned_cols=96 Identities=18% Similarity=0.096 Sum_probs=76.6
Q ss_pred CCeEEEEEeccCCCCHHHHHHhhccc----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCC
Q psy238 58 KPRVIFITEYMSSGSLKQFLKRTKRN----------------VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCD 121 (218)
Q Consensus 58 ~~~~~lv~e~~~~~sL~~~l~~~~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~ 121 (218)
...+++||+|+.+++|.+++...... +.......+..++.||+.||.|||+ ++|+||||||+
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~--~gIiHRDLKP~ 284 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS--TGIVHRDVKPQ 284 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH--CCEEeCcCCHH
Confidence 45689999999999999998754210 0011234466799999999999999 77999999999
Q ss_pred cEEEec-CCcEEEeecCcccc---------ccCCCccccccccc
Q psy238 122 TIFIQH-NGLVKIGCDTYTHT---------IENKKYLSATRQTY 155 (218)
Q Consensus 122 NiLl~~-~~~~ki~dfg~~~~---------~~~~~t~~y~aPE~ 155 (218)
|||++. ++.++|+|||++.. ....+++.|+|||.
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~ 328 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQ 328 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHH
Confidence 999986 58999999999864 24567899999994
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.77 E-value=2.7e-19 Score=163.88 Aligned_cols=133 Identities=14% Similarity=0.100 Sum_probs=99.4
Q ss_pred hhcCCC-CcccceeeeeecCCC---CCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q psy238 36 LTQLEH-PNIVKFHRYWTDTHN---DKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSP 111 (218)
Q Consensus 36 l~~l~h-p~iv~l~~~~~~~~~---~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~ 111 (218)
++.+.| +||+.++++|..... ....++++||++ +++|.++|.... ..++...++.++.||+.||.|||+ +
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~--~ 99 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHS--Q 99 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHh--C
Confidence 445566 688888888743322 223577888988 579999997532 459999999999999999999999 7
Q ss_pred CcccCCCCCCcEEEec-------------------CCcEEEeecCccccc------------------------cCCCcc
Q psy238 112 PIIHGNLTCDTIFIQH-------------------NGLVKIGCDTYTHTI------------------------ENKKYL 148 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~-------------------~~~~ki~dfg~~~~~------------------------~~~~t~ 148 (218)
||+||||||+||||+. ++.++++|||+++.. ...+|+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 7999999999999954 455667777766421 134788
Q ss_pred ccccccc--CCCCch----------hhhhhhCCCCCCc
Q psy238 149 SATRQTY--GRPISG----------QYEIVTKTNNVTE 174 (218)
Q Consensus 149 ~y~aPE~--~~~~~~----------~~ei~tg~~p~~~ 174 (218)
+|+|||+ +..++. +|||++|..|+..
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~ 217 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE 217 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence 8999997 333332 7999999888763
No 407
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=1.2e-17 Score=128.21 Aligned_cols=152 Identities=13% Similarity=0.024 Sum_probs=107.2
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.+..++.+.+..............+.+|+++|..+. +++|+.++++. ..+++|+|+.|.+|...+..
T Consensus 24 ~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------~~~lvmeyI~G~~L~~~~~~---- 91 (218)
T PRK12274 24 GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------GRHLDRSYLAGAAMYQRPPR---- 91 (218)
T ss_pred CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc--------CEEEEEeeecCccHHhhhhh----
Confidence 456677776654322111222336789999999995 58899998762 26999999998888654321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCC-CCCcEEEecCCcEEEeecCccccccCC-----------------
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNL-TCDTIFIQHNGLVKIGCDTYTHTIENK----------------- 145 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dl-kp~NiLl~~~~~~ki~dfg~~~~~~~~----------------- 145 (218)
. ...++.|++.+|.++|+ .||+|||| +|.|||++.++.++|+|||++......
T Consensus 92 ------~-~~~~~~qi~~~L~~lH~--~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk 162 (218)
T PRK12274 92 ------G-DLAYFRAARRLLQQLHR--CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLK 162 (218)
T ss_pred ------h-hHHHHHHHHHHHHHHHH--CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHH
Confidence 1 13477899999999999 77999999 799999999999999999998752211
Q ss_pred ----Cccccccccc---CC-----------CCchhhhhhhCCCCCCcchh
Q psy238 146 ----KYLSATRQTY---GR-----------PISGQYEIVTKTNNVTEKKK 177 (218)
Q Consensus 146 ----~t~~y~aPE~---~~-----------~~~~~~ei~tg~~p~~~~~~ 177 (218)
.++.|++|+- .. ...+.|.++|++.+..+..+
T Consensus 163 ~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 163 HKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 2555666652 11 11226888998888765443
No 408
>KOG1167|consensus
Probab=99.76 E-value=2.2e-18 Score=141.02 Aligned_cols=117 Identities=16% Similarity=0.275 Sum_probs=101.4
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.++.||+|.+-.. ....++.+|+++|..+ .+.||+.+.+++...+ .+++||+|+++....++...
T Consensus 63 ~~~~valk~i~~t------s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd----~v~ivlp~~~H~~f~~l~~~---- 128 (418)
T KOG1167|consen 63 KRRYVALKAIYRT------SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND----QVAIVLPYFEHDRFRDLYRS---- 128 (418)
T ss_pred ccceEeeeecccc------cCchHHHHHHHHHHHhccchhhhcchhhhccCC----eeEEEecccCccCHHHHHhc----
Confidence 5678999988752 3345689999999998 6899999999987654 59999999999899888864
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTH 140 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~ 140 (218)
++...+..+++.++.||.++|. .||||||+||.|+|.+.. +.-.|+|||++.
T Consensus 129 ---l~~~~i~~Yl~~ll~Al~~~h~--~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 129 ---LSLAEIRWYLRNLLKALAHLHK--NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred ---CCHHHHHHHHHHHHHHhhhhhc--cCccccCCCccccccccccCCceEEechhHH
Confidence 7789999999999999999999 889999999999999865 788899999876
No 409
>KOG1163|consensus
Probab=99.74 E-value=1.8e-17 Score=127.48 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=119.6
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCC-CcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH-PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~h-p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
...+|.+||||+-+.. .....+..|..+...+++ ++|..+..++.... +-.+||+.+ |.||.+++..+
T Consensus 36 ~i~~ge~VAiK~Es~~------a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~----ynvlVMdLL-GPsLEdLfnfC 104 (341)
T KOG1163|consen 36 SITSGEEVAIKLESSK------AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKD----YNVLVMDLL-GPSLEDLFNFC 104 (341)
T ss_pred eccCCceEEEEeeccc------CCCcchhHHHHHHHHhccCCCCchhhhhccccc----cceeeeecc-CccHHHHHHHH
Confidence 4568999999987632 222346677888888864 67777776665533 468999998 89999999877
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC---CcEEEeecCcccc---------------c
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN---GLVKIGCDTYTHT---------------I 142 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~---~~~ki~dfg~~~~---------------~ 142 (218)
.+ .++..+++-++.|++.-++|+|. +++|||||||+|+|+.-+ ..+.++|||++.. .
T Consensus 105 ~R---~ftmkTvLMLaDQml~RiEyvH~--r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r 179 (341)
T KOG1163|consen 105 SR---RFTMKTVLMLADQMLSRIEYVHL--RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDR 179 (341)
T ss_pred hh---hhhHHhHHHHHHHHHHHHHHHHh--hccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCC
Confidence 63 48999999999999999999999 779999999999999754 6789999999865 3
Q ss_pred cCCCccccccccc--CCCCch----------hhhhhhCCCCCCcchhh
Q psy238 143 ENKKYLSATRQTY--GRPISG----------QYEIVTKTNNVTEKKKE 178 (218)
Q Consensus 143 ~~~~t~~y~aPE~--~~~~~~----------~~ei~tg~~p~~~~~~e 178 (218)
...||..|.+-.- +-.-+. +.=..-|..||.+....
T Consensus 180 ~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 180 NLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 4567777765442 111111 22235688899766543
No 410
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.73 E-value=4.5e-17 Score=127.19 Aligned_cols=121 Identities=9% Similarity=0.162 Sum_probs=93.9
Q ss_pred CCcEEEEEEeecccccccHHHHHH------HHHHHHHhhcCCCCcccceeeeeecCCCC----CCeEEEEEeccCCCCHH
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHND----KPRVIFITEYMSSGSLK 74 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~------~~~ei~~l~~l~hp~iv~l~~~~~~~~~~----~~~~~lv~e~~~~~sL~ 74 (218)
++..+|||++..... ........ +.+|+..+.++.||+|..+..++...... .+..++||||++|.+|.
T Consensus 53 ~~~~~iiKvf~~~~~-~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~ 131 (232)
T PRK10359 53 DYGKYILKVFAPKVK-RTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELN 131 (232)
T ss_pred CCCcEEEEEechhcC-chHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHH
Confidence 466899999974322 22333233 57899999999999999998887654321 23579999999999998
Q ss_pred HHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 75 QFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
++.. ++. ....+++.+|..||+ .|++|+|++|+||++++++ ++|+|||.+..
T Consensus 132 ~~~~--------~~~----~~~~~i~~~l~~lH~--~gi~H~Dikp~Nili~~~g-i~liDfg~~~~ 183 (232)
T PRK10359 132 DMPE--------ISE----DVKAKIKASIESLHQ--HGMVSGDPHKGNFIVSKNG-LRIIDLSGKRC 183 (232)
T ss_pred Hhhh--------ccH----HHHHHHHHHHHHHHH--cCCccCCCChHHEEEeCCC-EEEEECCCccc
Confidence 8732 333 245699999999999 7799999999999999999 99999997765
No 411
>KOG1164|consensus
Probab=99.72 E-value=1.3e-16 Score=131.83 Aligned_cols=158 Identities=13% Similarity=0.040 Sum_probs=118.5
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCC----CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE----HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~----hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
..+|+|......... ...+..|+.++..+. .+++..+++.+. .....-|+||+.+ |.||.++.....
T Consensus 45 ~~~a~K~e~~~~~~~----~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~---~~~~~~~iVM~l~-G~sL~dl~~~~~- 115 (322)
T KOG1164|consen 45 KEYAKKLEKKELGSK----PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR---STEDFNFIVMSLL-GPSLEDLRKRNP- 115 (322)
T ss_pred eeEEEEEEEecccCC----CccchhHHHHHHHHhhhcCCCCCCEEEEecc---CCCceeEEEEecc-CccHHHHHHhCC-
Confidence 578888887432111 114666777777775 267888887774 1223579999998 899999887765
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-----CcEEEeecCccc--c--------------
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-----GLVKIGCDTYTH--T-------------- 141 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-----~~~ki~dfg~~~--~-------------- 141 (218)
...++..++..++.|++.+|.+||+ .|++||||||.|++++.. ..+.|.|||+++ .
T Consensus 116 -~~~fs~~T~l~ia~q~l~~l~~lH~--~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~ 192 (322)
T KOG1164|consen 116 -PGRFSRKTVLRIAIQNLNALEDLHS--KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRP 192 (322)
T ss_pred -CCCcCHhHHHHHHHHHHHHHHHHHh--cCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCC
Confidence 3569999999999999999999999 669999999999999764 469999999998 2
Q ss_pred --ccCCCcccccccccCC--CC----------chhhhhhhCCCCCCcch
Q psy238 142 --IENKKYLSATRQTYGR--PI----------SGQYEIVTKTNNVTEKK 176 (218)
Q Consensus 142 --~~~~~t~~y~aPE~~~--~~----------~~~~ei~tg~~p~~~~~ 176 (218)
....||..|.++.... .. ..+.++..|..||....
T Consensus 193 ~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 193 QKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred CccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 1234888998888522 11 22688888999995444
No 412
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=8.7e-17 Score=127.22 Aligned_cols=125 Identities=16% Similarity=0.129 Sum_probs=92.5
Q ss_pred CCCCCcEEEEEEeecccccc------------------cH--HHHHHHHHHHHHhhcCCCC--cccceeeeeecCCCCCC
Q psy238 2 DTEEGVEVVWNEVQFSERKN------------------FK--AQEEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKP 59 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~------------------~~--~~~~~~~~ei~~l~~l~hp--~iv~l~~~~~~~~~~~~ 59 (218)
+..+|..||||++....... .. .....+..|+.++..+.+. .++.++.+ .
T Consensus 50 ~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~---~----- 121 (237)
T smart00090 50 FDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAW---R----- 121 (237)
T ss_pred cCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEe---c-----
Confidence 45789999999998542110 00 0123456899999999653 34444432 1
Q ss_pred eEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-cccCCCCCCcEEEecCCcEEEeecCc
Q psy238 60 RVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPP-IIHGNLTCDTIFIQHNGLVKIGCDTY 138 (218)
Q Consensus 60 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~-iiH~dlkp~NiLl~~~~~~ki~dfg~ 138 (218)
..++||||++|.+|..+.... ..+....+..++.|++.+|.+||+ .+ ++|+||+|+||+++ ++.++|+|||.
T Consensus 122 ~~~lV~E~~~g~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~--~g~iiH~Dikp~NIli~-~~~i~LiDFg~ 194 (237)
T smart00090 122 RNVLVMEFIGGDGLPAPRLKD----VEPEEEEEFELYDDILEEMRKLYK--EGELVHGDLSEYNILVH-DGKVVIIDVSQ 194 (237)
T ss_pred CceEEEEEecCCccccccccc----CCcchHHHHHHHHHHHHHHHHHHh--cCCEEeCCCChhhEEEE-CCCEEEEEChh
Confidence 248999999887887654322 235666778999999999999999 88 99999999999999 88999999998
Q ss_pred ccc
Q psy238 139 THT 141 (218)
Q Consensus 139 ~~~ 141 (218)
+..
T Consensus 195 a~~ 197 (237)
T smart00090 195 SVE 197 (237)
T ss_pred hhc
Confidence 774
No 413
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=7.1e-16 Score=119.71 Aligned_cols=122 Identities=17% Similarity=0.249 Sum_probs=96.3
Q ss_pred CCcEEEEEEeecccccc----cHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 5 EGVEVVWNEVQFSERKN----FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~----~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
+|..|++|+........ .......+.+|+.++..+.|++|+....++.+.. ..++||+|++|++|.+++...
T Consensus 18 ~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv~e~~~G~~L~~~~~~~ 93 (211)
T PRK14879 18 LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE----NFIIVMEYIEGEPLKDLINSN 93 (211)
T ss_pred CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC----CCEEEEEEeCCcCHHHHHHhc
Confidence 67889999865322111 1122346788999999999998877766655433 368999999999999998642
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.. .+..++.+++.+|.++|+ .+++|+|++|.|||++ ++.++|+|||.+..
T Consensus 94 -------~~-~~~~i~~~i~~~l~~lH~--~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 94 -------GM-EELELSREIGRLVGKLHS--AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred -------cH-HHHHHHHHHHHHHHHHHh--CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 12 788899999999999999 7799999999999999 88999999998875
No 414
>KOG1165|consensus
Probab=99.67 E-value=3.8e-16 Score=125.12 Aligned_cols=159 Identities=11% Similarity=0.126 Sum_probs=124.4
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhh
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRT 80 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~ 80 (218)
++-+++.||||.-... +..-.+..|....+.| ..++|..+|.+.... -+-.||+|++ |.||.++..-+
T Consensus 49 Nl~nne~VAIKfEPrk------S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG----~~NiLVidLL-GPSLEDLFD~C 117 (449)
T KOG1165|consen 49 NLYNNEPVAIKFEPRK------SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG----KYNILVIDLL-GPSLEDLFDLC 117 (449)
T ss_pred ccccCceEEEEecccc------CCcchHHHHHHHHHHHcCCCCCCceeeecccc----chhhhhhhhh-CcCHHHHHHHh
Confidence 5678999999987642 2334567788877777 569999998766442 3557999998 89999999887
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-----CcEEEeecCcccc--------------
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-----GLVKIGCDTYTHT-------------- 141 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-----~~~ki~dfg~~~~-------------- 141 (218)
++ .|+..++.-++.|++.-+.|+|+ +.+|.|||||+|+||+.. ..+.|+|||++..
T Consensus 118 gR---~FSvKTV~miA~Qmi~rie~vH~--k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE 192 (449)
T KOG1165|consen 118 GR---RFSVKTVAMIAKQMITRIEYVHE--KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYRE 192 (449)
T ss_pred cC---cccHHhHHHHHHHHHHHHHHHHh--cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccc
Confidence 63 59999999999999999999999 669999999999999743 5788999999875
Q ss_pred -ccCCCcccccccc--cCCCCch----------hhhhhhCCCCCCcch
Q psy238 142 -IENKKYLSATRQT--YGRPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 142 -~~~~~t~~y~aPE--~~~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
....||..||+-. +|..-+. ..=.+-|..||.+-.
T Consensus 193 ~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 193 HKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred ccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 4578899999865 3443333 233578999997653
No 415
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=1.5e-15 Score=120.33 Aligned_cols=126 Identities=15% Similarity=0.106 Sum_probs=92.2
Q ss_pred CcEEEEEEeecccc------c---ccHHHHHHHHHHHHHhhcCCCCcc--cceeeeeecCCCCCCeEEEEEeccCC-CCH
Q psy238 6 GVEVVWNEVQFSER------K---NFKAQEEKIQQVFENLTQLEHPNI--VKFHRYWTDTHNDKPRVIFITEYMSS-GSL 73 (218)
Q Consensus 6 g~~vAvK~~~~~~~------~---~~~~~~~~~~~ei~~l~~l~hp~i--v~l~~~~~~~~~~~~~~~lv~e~~~~-~sL 73 (218)
|..+|||.+...+. . ........+.+|+.++..+.|++| +..+++...........++||++++| .+|
T Consensus 55 ~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L 134 (239)
T PRK01723 55 GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDL 134 (239)
T ss_pred CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCH
Confidence 67789998863221 0 011234567889999999988775 66666544322211234699999987 689
Q ss_pred HHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc
Q psy238 74 KQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI 142 (218)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~ 142 (218)
.+++... +++... +.+++.+|.+||+ .||+|+||+|.|||++.++.++|+|||.+...
T Consensus 135 ~~~l~~~-----~l~~~~----~~~i~~~l~~lH~--~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 135 VALLQEA-----PLSEEQ----WQAIGQLIARFHD--AGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred HHHHhcC-----CCCHHH----HHHHHHHHHHHHH--CCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 9887542 355443 5789999999999 77999999999999999999999999988764
No 416
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=1.5e-15 Score=116.84 Aligned_cols=120 Identities=17% Similarity=0.195 Sum_probs=91.2
Q ss_pred CCCcEEEEEEeecccccc----cHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHh
Q psy238 4 EEGVEVVWNEVQFSERKN----FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~----~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
.+|..|++|......... .......+.+|+.++..+.|+++.....++.... ..++||||++|++|.+++..
T Consensus 15 ~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv~e~~~g~~l~~~~~~ 90 (199)
T TIGR03724 15 FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD----NKTIVMEYIEGKPLKDVIEE 90 (199)
T ss_pred cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC----CCEEEEEEECCccHHHHHhh
Confidence 367889999865322111 1223466788999999998877554443433322 36899999999999998754
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.. . .++.+++.+|.+||+ .+++|+|++|.||+++ ++.++++|||.+..
T Consensus 91 ~~-----~------~~~~~i~~~l~~lH~--~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 91 GN-----D------ELLREIGRLVGKLHK--AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred cH-----H------HHHHHHHHHHHHHHH--CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 21 1 788999999999999 7799999999999999 89999999998775
No 417
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.63 E-value=9.7e-15 Score=118.06 Aligned_cols=163 Identities=26% Similarity=0.325 Sum_probs=127.2
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCC-cccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP-NIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp-~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
..+|+|.+....... ......+.+|+.++..+.|+ +|+.+.+++.... ..+++++++.++++.+++...... .
T Consensus 23 ~~~~~k~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~-~ 96 (384)
T COG0515 23 KLVALKVLAKKLESK-SKEVERFLREIQILASLNHPPNIVKLYDFFQDEG----SLYLVMEYVDGGSLEDLLKKIGRK-G 96 (384)
T ss_pred cEEEEEeechhhccc-hhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC----EEEEEEecCCCCcHHHHHHhcccc-c
Confidence 457888887542211 23577889999999999888 7999999985433 379999999999999777654311 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC-cEEEeecCcccc--------------ccCCCcccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG-LVKIGCDTYTHT--------------IENKKYLSA 150 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~--------------~~~~~t~~y 150 (218)
.++...+..++.|++.++.|+|+ .+++|||++|+||+++..+ .++++|||.+.. ....++..|
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~H~--~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~ 174 (384)
T COG0515 97 PLSESEALFILAQILSALEYLHS--KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGY 174 (384)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcccccccccccccccccc
Confidence 48899999999999999999999 6699999999999999988 799999998752 355789999
Q ss_pred cccccCC-----CCch----------hhhhhhCCCCCCcchh
Q psy238 151 TRQTYGR-----PISG----------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 151 ~aPE~~~-----~~~~----------~~ei~tg~~p~~~~~~ 177 (218)
+|||... .... .+++++|..||.....
T Consensus 175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~ 216 (384)
T COG0515 175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216 (384)
T ss_pred CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 9999733 2332 4556788888665543
No 418
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.63 E-value=2.6e-15 Score=115.74 Aligned_cols=118 Identities=17% Similarity=0.134 Sum_probs=87.2
Q ss_pred CCCcEEEEEEeecccccc--c----------------HHHHHHHHHHHHHhhcCCCCc--ccceeeeeecCCCCCCeEEE
Q psy238 4 EEGVEVVWNEVQFSERKN--F----------------KAQEEKIQQVFENLTQLEHPN--IVKFHRYWTDTHNDKPRVIF 63 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~--~----------------~~~~~~~~~ei~~l~~l~hp~--iv~l~~~~~~~~~~~~~~~l 63 (218)
.+|+.||||++....... . ......+..|+.++..+.+++ ++.+++. . ..++
T Consensus 37 ~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~----~----~~~l 108 (198)
T cd05144 37 PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDW----N----RHAV 108 (198)
T ss_pred CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeec----C----CceE
Confidence 379999999977432100 0 011224667888888887774 4444332 1 2589
Q ss_pred EEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 64 ITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 64 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
||||++|++|..+... .....++.+++.++.++|+ .+|+|+||+|.||+++.++.++|+|||++..
T Consensus 109 v~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~--~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~ 174 (198)
T cd05144 109 VMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYK--HGIIHGDLSEFNILVDDDEKIYIIDWPQMVS 174 (198)
T ss_pred EEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHH--CCCCcCCCCcccEEEcCCCcEEEEECCcccc
Confidence 9999999888765421 2345788899999999999 7799999999999999999999999998864
No 419
>KOG1266|consensus
Probab=99.62 E-value=2.9e-16 Score=125.73 Aligned_cols=157 Identities=71% Similarity=1.105 Sum_probs=132.8
Q ss_pred CCCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCC-CCCeEEEEEeccCCCCHHHHHHh
Q psy238 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRVIFITEYMSSGSLKQFLKR 79 (218)
Q Consensus 1 ~d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~ 79 (218)
||++.|-+|++..+....+.+...........+..|-++-|.|||+++.++.+... +..+..++.+|++.|+|..+|++
T Consensus 86 md~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkr 165 (458)
T KOG1266|consen 86 MDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKR 165 (458)
T ss_pred hhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHH
Confidence 57888999999988887777766666666777778888899999999999988655 56788999999999999999999
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCc
Q psy238 80 TKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKY 147 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t 147 (218)
.......++.....+|+.||++||.|||+|...|+|+++.-+.|++..+|.++|..-..... ....+.
T Consensus 166 t~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~ 245 (458)
T KOG1266|consen 166 TKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSL 245 (458)
T ss_pred HHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccC
Confidence 88877788899999999999999999999888899999999999999999999865332222 345667
Q ss_pred ccccccccCC
Q psy238 148 LSATRQTYGR 157 (218)
Q Consensus 148 ~~y~aPE~~~ 157 (218)
++|.+|+.|.
T Consensus 246 ~g~~a~~sg~ 255 (458)
T KOG1266|consen 246 PGFSAPESGT 255 (458)
T ss_pred CccccCCcCc
Confidence 8999999865
No 420
>KOG0590|consensus
Probab=99.61 E-value=3.2e-16 Score=138.45 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=113.6
Q ss_pred HHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhc
Q psy238 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS 108 (218)
Q Consensus 29 ~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 108 (218)
+..|+-+-..+.|||++..+..+.+... .+-+||||++ +|..++... ..+....+-.++.|++.|+.|||+
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~----~~~~mE~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h~ 438 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDG----ILQSMEYCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLHS 438 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhccc----chhhhhcccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHHh
Confidence 5667777788899999888776665432 3344999998 999998764 248888999999999999999999
Q ss_pred CCCCcccCCCCCCcEEEecCCcEEEeecCcccc------------ccCCCcccccccccCC--CCch-----------hh
Q psy238 109 CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT------------IENKKYLSATRQTYGR--PISG-----------QY 163 (218)
Q Consensus 109 ~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~------------~~~~~t~~y~aPE~~~--~~~~-----------~~ 163 (218)
.||.|||+||+|+++..+|.++|+|||.+.. ....|+.+|+|||+.. .+.+ ..
T Consensus 439 --~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~ 516 (601)
T KOG0590|consen 439 --MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYI 516 (601)
T ss_pred --cCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEE
Confidence 6699999999999999999999999998754 5678999999999743 3333 56
Q ss_pred hhhhCCCCCCcchhhhh
Q psy238 164 EIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 164 ei~tg~~p~~~~~~ee~ 180 (218)
.|++|+.||.....++.
T Consensus 517 ~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 517 CMILGRFPWKVAKKSDN 533 (601)
T ss_pred EEecCCCcccccccccc
Confidence 78888999976665544
No 421
>KOG4158|consensus
Probab=99.61 E-value=2.7e-15 Score=122.99 Aligned_cols=127 Identities=17% Similarity=0.309 Sum_probs=100.1
Q ss_pred CCCcccceeeeeecCC-----------------------CCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHH
Q psy238 40 EHPNIVKFHRYWTDTH-----------------------NDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWC 96 (218)
Q Consensus 40 ~hp~iv~l~~~~~~~~-----------------------~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~ 96 (218)
.|||||++.++|.++- .....+|+||..++ .+|..++.... .+..+..-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-----~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-----RSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-----CchHHHHHHH
Confidence 5999999999887732 12345899999995 79999998653 5667888899
Q ss_pred HHHHHHHHHhhcCCCCcccCCCCCCcEEE--ecC--CcEEEeecCcccc--------------ccCCCcccccccccCCC
Q psy238 97 SQILSALSYLHSCSPPIIHGNLTCDTIFI--QHN--GLVKIGCDTYTHT--------------IENKKYLSATRQTYGRP 158 (218)
Q Consensus 97 ~qi~~~l~~lH~~~~~iiH~dlkp~NiLl--~~~--~~~ki~dfg~~~~--------------~~~~~t~~y~aPE~~~~ 158 (218)
.|+++|+.|||. +||.|||||++|||+ ++| ..+.|+|||.+-. ...-|....||||+...
T Consensus 348 aQlLEav~hL~~--hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 348 AQLLEAVTHLHK--HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHH--ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 889999999999999 344 4678999997643 22345566799998442
Q ss_pred Cch------------------hhhhhhCCCCCCc
Q psy238 159 ISG------------------QYEIVTKTNNVTE 174 (218)
Q Consensus 159 ~~~------------------~~ei~tg~~p~~~ 174 (218)
... +|||++-..||..
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence 221 7999999999976
No 422
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=9.6e-15 Score=128.47 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Q psy238 26 EEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSY 105 (218)
Q Consensus 26 ~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 105 (218)
...+.+|+.++..++|++++....++.+.. ..++||||++|++|.+++. ....++.|++.+|.+
T Consensus 380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~ 443 (535)
T PRK09605 380 TERTRAEARLLSEARRAGVPTPVIYDVDPE----EKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAK 443 (535)
T ss_pred HHHHHHHHHHHHhhcccCCCeeEEEEEeCC----CCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHH
Confidence 456889999999999999888766655533 3689999999999999885 235688999999999
Q ss_pred hhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 106 LHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 106 lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
||+ .+++||||+|+|||+ .++.++|+|||++..
T Consensus 444 lH~--~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 444 LHK--AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHh--CCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 999 779999999999999 678999999999876
No 423
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.55 E-value=2.3e-14 Score=107.89 Aligned_cols=93 Identities=20% Similarity=0.198 Sum_probs=77.3
Q ss_pred CCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---ccCCCc
Q psy238 71 GSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---IENKKY 147 (218)
Q Consensus 71 ~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---~~~~~t 147 (218)
|||.+++.... .++++..++.++.|++.||.|||+ .+ ||+|||++.++.+++ ||.+.. ....||
T Consensus 1 GsL~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~lH~--~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~ 67 (176)
T smart00750 1 VSLADILEVRG---RPLNEEEIWAVCLQCLRALRELHR--QA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVD 67 (176)
T ss_pred CcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh--cC------CcccEeEcCccceee--ccceEeeccccCCCc
Confidence 68999998643 459999999999999999999999 66 999999999999999 998765 345789
Q ss_pred ccccccccC--CCCch----------hhhhhhCCCCCCcch
Q psy238 148 LSATRQTYG--RPISG----------QYEIVTKTNNVTEKK 176 (218)
Q Consensus 148 ~~y~aPE~~--~~~~~----------~~ei~tg~~p~~~~~ 176 (218)
+.|+|||+. ..++. +|+|++|..||....
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~ 108 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEER 108 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 999999973 23322 799999999996543
No 424
>KOG0603|consensus
Probab=99.55 E-value=1.2e-15 Score=130.89 Aligned_cols=158 Identities=14% Similarity=0.105 Sum_probs=127.1
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.|.-+|.|++......... ......|..++..++ ||.++.++..+.... .++++++++.|+.|...+.....
T Consensus 21 a~~~yamkvl~k~t~~~~~--~~~t~~er~il~~~~~~~f~v~lhyafqt~~----kl~l~ld~~rgg~lft~l~~~~~- 93 (612)
T KOG0603|consen 21 AGHLYAMKVLKKATLKVRD--RTHTKQERIILAFVHNTPFLVKLHYAFQTDG----KLYLILDFLRGGDLFTRLSKEVM- 93 (612)
T ss_pred ccchhhhhccccccccccc--ccccccHHHHHhhccCCCceeeeeeeecccc----chhHhhhhcccchhhhccccCCc-
Confidence 3556777777643222211 114556777888886 999999998887654 58999999999999888877643
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----ccCCCcccccccccCC--
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----IENKKYLSATRQTYGR-- 157 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----~~~~~t~~y~aPE~~~-- 157 (218)
+....+..+...++.+++++|+ .+|+|||+|++||+++.+|++++.|||.+.. ...+||..|||||+..
T Consensus 94 ---f~~~~~~~~~aelaLald~lh~--l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~gh 168 (612)
T KOG0603|consen 94 ---FDELDVAFYLAELALALDHLHK--LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGH 168 (612)
T ss_pred ---hHHHHHHHHHHHHHHHHhhcch--hHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhhcc
Confidence 7888889999999999999999 6699999999999999999999999999876 3448999999999733
Q ss_pred ----CCch----hhhhhhCCCCCCc
Q psy238 158 ----PISG----QYEIVTKTNNVTE 174 (218)
Q Consensus 158 ----~~~~----~~ei~tg~~p~~~ 174 (218)
.++. ++|++||..||..
T Consensus 169 ~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 169 LSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred CCcccchhhhhhHHHHhhCCCCCch
Confidence 2322 7999999999987
No 425
>KOG1024|consensus
Probab=99.51 E-value=2.4e-13 Score=111.27 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc----cCCCCCHHHHHHHHHH
Q psy238 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR----NVKKLPLSAWKRWCSQ 98 (218)
Q Consensus 23 ~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~~~~~~~~q 98 (218)
.-....++.|--.+-.+.|||+..+.+++..... .-++++.++.-|+|..|+.-.++ ....++..+...++.|
T Consensus 328 ~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~---~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQ 404 (563)
T KOG1024|consen 328 QIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA---TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQ 404 (563)
T ss_pred HHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC---cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHH
Confidence 4455677788888888899999999998876433 35778888888999999984432 1233666778889999
Q ss_pred HHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc----------ccCCCccccccccc--CCCCch-----
Q psy238 99 ILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTY--GRPISG----- 161 (218)
Q Consensus 99 i~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~--~~~~~~----- 161 (218)
++.|++|||+ ++|||.||..+|.+||+..+++|+|-.+++. ........||+||- ...++.
T Consensus 405 la~am~hlh~--~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvW 482 (563)
T KOG1024|consen 405 LAMAMEHLHN--HGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVW 482 (563)
T ss_pred HHHHHHHHHh--cCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhH
Confidence 9999999999 7799999999999999999999999998876 33455788999994 223333
Q ss_pred -----hhhhh-hCCCCCCcchhhhhH
Q psy238 162 -----QYEIV-TKTNNVTEKKKEKEE 181 (218)
Q Consensus 162 -----~~ei~-tg~~p~~~~~~ee~~ 181 (218)
++|++ .|+.|+.+....|.+
T Consensus 483 sfGVllWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 483 SFGVLLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred HHHHHHHHHHhcCCCCccccCHHHHH
Confidence 56654 488888777665543
No 426
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.50 E-value=1.1e-13 Score=100.76 Aligned_cols=115 Identities=16% Similarity=0.141 Sum_probs=89.7
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCC--CcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~h--p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
+..+++|...... . ...+..|+.++..+.+ +++++++.++... +..+++|+|+.+.++..+
T Consensus 21 ~~~~~iK~~~~~~----~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~----~~~~~v~e~~~g~~~~~~------- 83 (155)
T cd05120 21 DEDYVLKINPSRE----K--GADREREVAILQLLARKGLPVPKVLASGESD----GWSYLLMEWIEGETLDEV------- 83 (155)
T ss_pred CCeEEEEecCCCC----c--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC----CccEEEEEecCCeecccC-------
Confidence 3678999876321 1 4567889999999865 5888888777543 358999999987766543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCC-CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCS-PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
+......++.+++.+|.+||... .+++|+|++|.|||++..+.++++||+.+..
T Consensus 84 ----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 84 ----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 34556677889999999999831 2599999999999999999999999998764
No 427
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.48 E-value=2.8e-13 Score=103.16 Aligned_cols=120 Identities=21% Similarity=0.260 Sum_probs=80.1
Q ss_pred CCcEEEEEEeecccccccHHHHH---------------------HHHHHHHHhhcCCCCc--ccceeeeeecCCCCCCeE
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEE---------------------KIQQVFENLTQLEHPN--IVKFHRYWTDTHNDKPRV 61 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~---------------------~~~~ei~~l~~l~hp~--iv~l~~~~~~~~~~~~~~ 61 (218)
+|..||||++....... ..... ....|...+..+.+.+ +..++++. ..
T Consensus 20 ~~~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~--------~~ 90 (187)
T cd05119 20 DGEPVAVKIYRTGRTSF-KKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDLN--------RH 90 (187)
T ss_pred CCCEEEEEEEecCccch-hhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEecC--------CC
Confidence 78999999987432111 11111 1134555565554433 44444321 25
Q ss_pred EEEEeccCCCCHHH-HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCcc
Q psy238 62 IFITEYMSSGSLKQ-FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139 (218)
Q Consensus 62 ~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~ 139 (218)
++||+|++++++.. .+.... .. ..+..++.+++.++.++|+ .+ |+|+||+|+||+++ ++.++|+|||.+
T Consensus 91 ~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~-~~~~~liDfg~a 161 (187)
T cd05119 91 VLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD-DGKVYIIDVPQA 161 (187)
T ss_pred EEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-CCcEEEEECccc
Confidence 89999998844321 121111 11 5678899999999999998 66 99999999999999 999999999998
Q ss_pred ccc
Q psy238 140 HTI 142 (218)
Q Consensus 140 ~~~ 142 (218)
...
T Consensus 162 ~~~ 164 (187)
T cd05119 162 VEI 164 (187)
T ss_pred ccc
Confidence 753
No 428
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.48 E-value=1.9e-13 Score=109.99 Aligned_cols=174 Identities=13% Similarity=0.105 Sum_probs=103.2
Q ss_pred CCCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCC----------CcccceeeeeecC--------CCCCC----
Q psy238 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH----------PNIVKFHRYWTDT--------HNDKP---- 59 (218)
Q Consensus 2 d~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~h----------p~iv~l~~~~~~~--------~~~~~---- 59 (218)
|.+||+.+|||+..... .......+.+.+|.-....+.+ -.++-.++..... ..+..
T Consensus 33 d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v 111 (288)
T PF14531_consen 33 DVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWV 111 (288)
T ss_dssp ETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEE
T ss_pred EccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcceecCCCCcccee
Confidence 67899999999998765 3334445566666544444322 1122222222211 11111
Q ss_pred -eEEEEEeccCCCCHHHHHHhhccc---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEee
Q psy238 60 -RVIFITEYMSSGSLKQFLKRTKRN---VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135 (218)
Q Consensus 60 -~~~lv~e~~~~~sL~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~d 135 (218)
+.+++|+-+. ++|.+++..-... ...+.......+..|++..+++||+ .|++|+||+|+|++++.+|.+.|+|
T Consensus 112 ~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~--~GlVHgdi~~~nfll~~~G~v~Lg~ 188 (288)
T PF14531_consen 112 LNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS--YGLVHGDIKPENFLLDQDGGVFLGD 188 (288)
T ss_dssp ESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEST-SGGGEEE-TTS-EEE--
T ss_pred ehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh--cceEecccceeeEEEcCCCCEEEcC
Confidence 2477888884 7998886642211 1112233345566899999999999 7799999999999999999999999
Q ss_pred cCcccc-----ccCCCcccccccccCCC----------Cch----------hhhhhhCCCCCCcchhhh
Q psy238 136 DTYTHT-----IENKKYLSATRQTYGRP----------ISG----------QYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 136 fg~~~~-----~~~~~t~~y~aPE~~~~----------~~~----------~~ei~tg~~p~~~~~~ee 179 (218)
|+.... .....+..|.+||+... ++. +|.||+|+.||.....+-
T Consensus 189 F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~ 257 (288)
T PF14531_consen 189 FSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEA 257 (288)
T ss_dssp GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGS
T ss_pred hHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccc
Confidence 987654 11455677889986221 122 699999999998665443
No 429
>KOG0195|consensus
Probab=99.43 E-value=7.6e-14 Score=109.54 Aligned_cols=166 Identities=18% Similarity=0.236 Sum_probs=126.8
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
+.|..+++|++...+ -.......|..|.-.|+-+.||||+.+++.|.++. ++.++..||+.|||..+++...+
T Consensus 211 wqgndivakil~vr~--~t~risrdfneefp~lrifshpnilpvlgacnspp----nlv~isq~mp~gslynvlhe~t~- 283 (448)
T KOG0195|consen 211 WQGNDIVAKILNVRE--VTARISRDFNEEFPALRIFSHPNILPVLGACNSPP----NLVIISQYMPFGSLYNVLHEQTS- 283 (448)
T ss_pred ccCcchhhhhhhhhh--cchhhcchhhhhCcceeeecCCchhhhhhhccCCC----CceEeeeeccchHHHHHHhcCcc-
Confidence 456778888887642 22445567888888899999999999999997754 59999999999999999997643
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEE--eecCcccc-ccCCCcccccccccCC--C
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKI--GCDTYTHT-IENKKYLSATRQTYGR--P 158 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki--~dfg~~~~-~~~~~t~~y~aPE~~~--~ 158 (218)
..++-.++.+++..++.|+.|||+...-|.---|.+..+++|++...+| +|.-++.. .+..-.+.||+||-.. +
T Consensus 284 -vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkp 362 (448)
T KOG0195|consen 284 -VVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKP 362 (448)
T ss_pred -EEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCc
Confidence 4577889999999999999999995333555678999999999876555 55555554 4556688999999522 1
Q ss_pred Cch-------------hhhhhhCCCCCCcchh
Q psy238 159 ISG-------------QYEIVTKTNNVTEKKK 177 (218)
Q Consensus 159 ~~~-------------~~ei~tg~~p~~~~~~ 177 (218)
-+. ++|+.|-..||.+.+.
T Consensus 363 ed~n~raadmwsfaillwel~trevpfadlsp 394 (448)
T KOG0195|consen 363 EDLNIRAADMWSFAILLWELNTREVPFADLSP 394 (448)
T ss_pred hhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence 111 5788888888875543
No 430
>KOG1166|consensus
Probab=99.37 E-value=4.6e-13 Score=121.89 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=102.6
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCC---CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~---hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
+|+.||+|+-...+...+ ..-.+++.+|. -+.|+.+...+.-.+. .++|++|.+.|||.+++...
T Consensus 721 ~~~~~alK~e~P~~~WEf-------YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~----S~lv~ey~~~Gtlld~~N~~- 788 (974)
T KOG1166|consen 721 NGKLVALKVEKPPNPWEF-------YICLQVMERLKPQMLPSIMHISSAHVFQNA----SVLVSEYSPYGTLLDLINTN- 788 (974)
T ss_pred CCcEEEEEeecCCCceee-------eehHHHHHhhchhhhcchHHHHHHHccCCc----ceeeeeccccccHHHhhccC-
Confidence 388999998886533221 11122333333 2345555444333332 58999999999999999843
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-------CCcEEEeecCcccc----------ccC
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-------NGLVKIGCDTYTHT----------IEN 144 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-------~~~~ki~dfg~~~~----------~~~ 144 (218)
..+++..+..++.|++..++.||. .+|||+||||+|+||.. ..-++|+|||.+-. ...
T Consensus 789 ---~~m~e~lv~~~~~qml~ive~lH~--~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~ 863 (974)
T KOG1166|consen 789 ---KVMDEYLVMFFSCQMLRIVEHLHA--MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAV 863 (974)
T ss_pred ---CCCCchhhhHHHHHHHHHHHHHHh--cceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeee
Confidence 459999999999999999999999 55999999999999953 35689999998754 566
Q ss_pred CCccccccccc--CCCCch
Q psy238 145 KKYLSATRQTY--GRPISG 161 (218)
Q Consensus 145 ~~t~~y~aPE~--~~~~~~ 161 (218)
++|-.+-++|. |.+++.
T Consensus 864 ~~td~f~C~EM~~grpWtY 882 (974)
T KOG1166|consen 864 WHTDLFDCIEMREGRPWTY 882 (974)
T ss_pred eccccchhHHHhcCCCCch
Confidence 77888889997 666665
No 431
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.37 E-value=7.2e-12 Score=95.86 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=70.9
Q ss_pred HHHHHhhcCCC--CcccceeeeeecCCCCCCeEEEEEeccCCCCHHH-HHHhhcccCCCCCHHHHHHHHHHHHHHHHHh-
Q psy238 31 QVFENLTQLEH--PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ-FLKRTKRNVKKLPLSAWKRWCSQILSALSYL- 106 (218)
Q Consensus 31 ~ei~~l~~l~h--p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l- 106 (218)
+|+..|+++.. .+++.++.+. .-++||||+.+..+.. .+... .++...+..+..+++.+|..|
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~~--------~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVLK--------KHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEec--------CCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHH
Confidence 79999998853 5566776542 2489999996543321 22221 255556677889999999999
Q ss_pred hcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc
Q psy238 107 HSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI 142 (218)
Q Consensus 107 H~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~ 142 (218)
|. .+|+|+||+|.|||++ ++.+.|+|||.+-..
T Consensus 142 H~--~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 142 KE--CNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred Hh--CCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 88 5699999999999997 578999999976643
No 432
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.32 E-value=8.2e-12 Score=107.15 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=56.9
Q ss_pred EEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHH-HHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcc
Q psy238 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILS-ALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139 (218)
Q Consensus 61 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~-~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~ 139 (218)
.++||||++|++|.++...... ..+ ...++.+++. .+..+|. .|++|+|++|.||+++.++.++++|||++
T Consensus 233 ~vLvmE~i~G~~L~~~~~~~~~---~~~---~~~ia~~~~~~~l~ql~~--~g~~H~D~hPgNilv~~~g~i~liDfG~~ 304 (437)
T TIGR01982 233 RVLTMEWIDGIPLSDIAALDEA---GLD---RKALAENLARSFLNQVLR--DGFFHADLHPGNIFVLKDGKIIALDFGIV 304 (437)
T ss_pred ceEEEEeECCcccccHHHHHhc---CCC---HHHHHHHHHHHHHHHHHh--CCceeCCCCcccEEECCCCcEEEEeCCCe
Confidence 5899999999999988754321 122 2345555554 4677899 77999999999999999999999999988
Q ss_pred cc
Q psy238 140 HT 141 (218)
Q Consensus 140 ~~ 141 (218)
..
T Consensus 305 ~~ 306 (437)
T TIGR01982 305 GR 306 (437)
T ss_pred eE
Confidence 65
No 433
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.29 E-value=1.5e-10 Score=92.99 Aligned_cols=133 Identities=9% Similarity=0.031 Sum_probs=90.9
Q ss_pred CCcEEEEEEeecccccc-cHH------HHHHHHHHHHHhhcCCCCc--ccceeeeeecCC-CCCCeEEEEEeccCCC-CH
Q psy238 5 EGVEVVWNEVQFSERKN-FKA------QEEKIQQVFENLTQLEHPN--IVKFHRYWTDTH-NDKPRVIFITEYMSSG-SL 73 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~-~~~------~~~~~~~ei~~l~~l~hp~--iv~l~~~~~~~~-~~~~~~~lv~e~~~~~-sL 73 (218)
.|+.|.||......... ... -...+.+|...+..+..-+ .+.+..++.... ......++||+++++. +|
T Consensus 44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL 123 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISL 123 (268)
T ss_pred CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccH
Confidence 56789999775321100 000 0113678888887774333 334444443321 1123568999999875 89
Q ss_pred HHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec-------CCcEEEeecCcccc
Q psy238 74 KQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH-------NGLVKIGCDTYTHT 141 (218)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~-------~~~~ki~dfg~~~~ 141 (218)
.+++..... .+.+......++.+++..+..||. .||+|+||+|.|||++. ++.+.++||+.+..
T Consensus 124 ~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~--~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 124 EDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHA--AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999864322 235567778899999999999999 77999999999999975 47899999998854
No 434
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=2e-11 Score=91.36 Aligned_cols=113 Identities=16% Similarity=0.088 Sum_probs=77.5
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcc-cceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhccc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNI-VKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRN 83 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~i-v~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 83 (218)
.|..|++|+...... ....+..|+.++..+.+.++ ++++.+... ..++||++++|.++... .
T Consensus 20 ~~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~------~~~lv~e~i~G~~l~~~--~---- 82 (170)
T cd05151 20 ANKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFDPE------TGVLITEFIEGSELLTE--D---- 82 (170)
T ss_pred CCeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEeCC------CCeEEEEecCCCccccc--c----
Confidence 467899998763211 12235678888887755444 445544321 24799999998877543 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCC---CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 84 VKKLPLSAWKRWCSQILSALSYLHSCS---PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 84 ~~~~~~~~~~~~~~qi~~~l~~lH~~~---~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
. ....++.+++.+|..||+.+ .+++|+|++|.||+++ ++.+.++||+.+..
T Consensus 83 ---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 83 ---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 1 11235678999999999932 1249999999999999 67899999998764
No 435
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=2.5e-11 Score=105.90 Aligned_cols=72 Identities=11% Similarity=0.113 Sum_probs=51.7
Q ss_pred EEEEEeccCCCCHHHHHH--hhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC----cEEEe
Q psy238 61 VIFITEYMSSGSLKQFLK--RTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG----LVKIG 134 (218)
Q Consensus 61 ~~lv~e~~~~~sL~~~l~--~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~----~~ki~ 134 (218)
.++||||+.|+++.++-. ..+.+...+....+..++.|++ . .|++|+|++|.||+++.++ .+.++
T Consensus 236 ~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~--~GffHaDpHPGNIlv~~~g~~~~~i~ll 306 (537)
T PRK04750 236 TVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------R--DGFFHADMHPGNIFVSYDPPENPRYIAL 306 (537)
T ss_pred ceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------h--CCeeeCCCChHHeEEecCCCCCCeEEEE
Confidence 589999999999987532 2211111233444444555553 4 6699999999999999888 99999
Q ss_pred ecCcccc
Q psy238 135 CDTYTHT 141 (218)
Q Consensus 135 dfg~~~~ 141 (218)
|||++..
T Consensus 307 DFGivg~ 313 (537)
T PRK04750 307 DFGIVGS 313 (537)
T ss_pred ecceEEE
Confidence 9998765
No 436
>KOG1243|consensus
Probab=99.23 E-value=1.1e-10 Score=101.61 Aligned_cols=120 Identities=26% Similarity=0.365 Sum_probs=100.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
+.+|.+|.|..++.+.. .....+.+-++-|+.++||+|+.++..+...+ .+|+|+|.+ ..|..++...
T Consensus 34 k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~----~~ylvTErV--~Pl~~~lk~l-- 101 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG----TLYLVTERV--RPLETVLKEL-- 101 (690)
T ss_pred eccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccC----ceEEEeecc--ccHHHHHHHh--
Confidence 46889999999985422 44556677788899999999999998887654 699999998 4788888764
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
....+..-+.||+.||.|||. |+ ++|++|.-..|+|+..|..+|++|.++..
T Consensus 102 -----~~~~v~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~ 154 (690)
T KOG1243|consen 102 -----GKEEVCLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSK 154 (690)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence 355677778999999999986 66 99999999999999999999999988765
No 437
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=9.6e-11 Score=87.64 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=82.2
Q ss_pred CcEEEEEEeecccc----cccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 6 GVEVVWNEVQFSER----KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 6 g~~vAvK~~~~~~~----~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
|..+++|.-....- -+..-...+..+|+.++..+.--+|...+-++.+++. ..++|||++|..|.+++...
T Consensus 19 g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~----~~I~me~I~G~~lkd~l~~~- 93 (204)
T COG3642 19 GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDN----GLIVMEYIEGELLKDALEEA- 93 (204)
T ss_pred CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCC----CEEEEEEeCChhHHHHHHhc-
Confidence 55566665442210 1112234567789999988865454444334444432 58999999998899888753
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
...++..+-.-+.-||. .||+|+||.++||+++.+. +.++|||++..
T Consensus 94 ----------~~~~~r~vG~~vg~lH~--~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 94 ----------RPDLLREVGRLVGKLHK--AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ----------chHHHHHHHHHHHHHHh--cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 13455666677888999 7799999999999997665 99999999875
No 438
>KOG1023|consensus
Probab=99.20 E-value=4.3e-11 Score=102.41 Aligned_cols=137 Identities=28% Similarity=0.371 Sum_probs=110.4
Q ss_pred hhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCc-c
Q psy238 36 LTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPI-I 114 (218)
Q Consensus 36 l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i-i 114 (218)
|+.+.|.|+.+++|.+.+. +.++.|.+||+-|+|.+.+.... ..++......+++.++.||.|+|+. .| .
T Consensus 1 l~~l~h~n~~~f~g~~~~~----~~~~~i~~~c~rGsl~D~i~~~~---~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~ 71 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG----PEMIVIWEYCSRGSLLDILSNED---IKLDYFFILSFIRDISKGLAYLHNS--PIGY 71 (484)
T ss_pred CcccchhhhhhheeeEecC----CceEEEEeeecCccHHhHHhccc---cCccHHHHHHHHHHHHHHHHHHhcC--ccee
Confidence 4568999999999999886 35899999999999999998743 3477777888899999999999994 35 9
Q ss_pred cCCCCCCcEEEecCCcEEEeecCcccccc----------CCCcccccccccCCC---------Cch----------hhhh
Q psy238 115 HGNLTCDTIFIQHNGLVKIGCDTYTHTIE----------NKKYLSATRQTYGRP---------ISG----------QYEI 165 (218)
Q Consensus 115 H~dlkp~NiLl~~~~~~ki~dfg~~~~~~----------~~~t~~y~aPE~~~~---------~~~----------~~ei 165 (218)
|+.|++.|.+++....++|+|||+..... ..-..-|.|||+... .+. ++||
T Consensus 72 hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 72 HGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred eeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 99999999999999999999999877632 123466789997332 111 6999
Q ss_pred hhCCCCCCcchhhhhH
Q psy238 166 VTKTNNVTEKKKEKEE 181 (218)
Q Consensus 166 ~tg~~p~~~~~~ee~~ 181 (218)
++-..||+.....+..
T Consensus 152 ~~r~~~~~~~~~~~~~ 167 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDP 167 (484)
T ss_pred HhccCccccccccCCh
Confidence 9999999876655543
No 439
>KOG1240|consensus
Probab=99.18 E-value=8.1e-12 Score=113.42 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=102.5
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccC
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNV 84 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~ 84 (218)
.|. |+||++-..+..........-+.+++ ...+++||++++.-+-... ...|||=+|.. .+|.|.+.-++
T Consensus 46 eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~----kAAylvRqyvk-hnLyDRlSTRP--- 115 (1431)
T KOG1240|consen 46 EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD----KAAYLVRQYVK-HNLYDRLSTRP--- 115 (1431)
T ss_pred Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh----HHHHHHHHHHh-hhhhhhhccch---
Confidence 344 99999886544333333333444555 5666899999997664432 24688889985 69999998654
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc---------------ccCCCccc
Q psy238 85 KKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT---------------IENKKYLS 149 (218)
Q Consensus 85 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~---------------~~~~~t~~ 149 (218)
-+.......++.|++.||..+|. .||+|+|||.+||||..=.++.|+||..-.. .+...-.-
T Consensus 116 -FL~~iEKkWiaFQLL~al~qcH~--~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtC 192 (1431)
T KOG1240|consen 116 -FLVLIEKKWIAFQLLKALSQCHK--LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTC 192 (1431)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHH--cCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceee
Confidence 27778888899999999999999 6699999999999999999999999874322 23333456
Q ss_pred cccccc
Q psy238 150 ATRQTY 155 (218)
Q Consensus 150 y~aPE~ 155 (218)
|+|||.
T Consensus 193 YiAPER 198 (1431)
T KOG1240|consen 193 YIAPER 198 (1431)
T ss_pred ecChHh
Confidence 899995
No 440
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.18 E-value=1.6e-10 Score=88.01 Aligned_cols=122 Identities=21% Similarity=0.196 Sum_probs=75.8
Q ss_pred CCCcEEEEEEeecccc----------------------cccHHHHHHHHHHHHHhhcCCCC--cccceeeeeecCCCCCC
Q psy238 4 EEGVEVVWNEVQFSER----------------------KNFKAQEEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKP 59 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~----------------------~~~~~~~~~~~~ei~~l~~l~hp--~iv~l~~~~~~~~~~~~ 59 (218)
.+|..||||+...... ...........+|...|..+..- +++.++.+..
T Consensus 8 ~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~------- 80 (188)
T PF01163_consen 8 PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR------- 80 (188)
T ss_dssp CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET-------
T ss_pred CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC-------
Confidence 4678999999885310 01111234667899999999765 4666665431
Q ss_pred eEEEEEeccC--CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH-hhcCCCCcccCCCCCCcEEEecCCcEEEeec
Q psy238 60 RVIFITEYMS--SGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSY-LHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136 (218)
Q Consensus 60 ~~~lv~e~~~--~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~-lH~~~~~iiH~dlkp~NiLl~~~~~~ki~df 136 (218)
-++||||++ |..+..+.... ++......++.+++..+.. +|. .||+|+||.+.|||++++ .+.|+||
T Consensus 81 -~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~--~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 81 -NVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHK--AGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp -TEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHC--TTEEESS-STTSEEEETT-CEEE--G
T ss_pred -CEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHh--cCceecCCChhhEEeecc-eEEEEec
Confidence 389999997 65554443322 1123455667777775555 578 569999999999999887 9999999
Q ss_pred Cccccc
Q psy238 137 TYTHTI 142 (218)
Q Consensus 137 g~~~~~ 142 (218)
|.+...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 977653
No 441
>KOG3087|consensus
Probab=99.15 E-value=4.8e-10 Score=83.80 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=91.8
Q ss_pred CCCCcEEEEEEeecccc----cccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCC-CCHHHHH
Q psy238 3 TEEGVEVVWNEVQFSER----KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSS-GSLKQFL 77 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~----~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l 77 (218)
...|+.+.||.-....- -+..-...+..+|+.+|.+++--+|.-..-+|.+... -+++|||++| .++.+++
T Consensus 27 ~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~----~~i~ME~~~g~~~vk~~i 102 (229)
T KOG3087|consen 27 SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG----GQIYMEFIDGASTVKDFI 102 (229)
T ss_pred ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC----CeEEEEeccchhHHHHHH
Confidence 35677777775442210 1223345677889999988875565554445555443 4899999975 4888998
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCC---cEEEeecCcccc
Q psy238 78 KRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNG---LVKIGCDTYTHT 141 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~---~~ki~dfg~~~~ 141 (218)
...... +........++.+|-..+.-||. +.|+|+||.++||++.+++ .+.++|||++..
T Consensus 103 ~~~~~~--~~~d~~~~~~~~~iG~~igklH~--ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 103 LSTMED--ESEDEGLAELARRIGELIGKLHD--NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred HHHccC--cccchhHHHHHHHHHHHHHHhhh--CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 877542 23333336788889999999999 7899999999999996553 458999999875
No 442
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.11 E-value=1.3e-09 Score=84.48 Aligned_cols=110 Identities=17% Similarity=0.219 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhhcCCC--CcccceeeeeecCCCCCCeEEEEEeccCCC-CHHHHHHhhcccCCCCCHHHHHHHHHHHHHH
Q psy238 26 EEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRVIFITEYMSSG-SLKQFLKRTKRNVKKLPLSAWKRWCSQILSA 102 (218)
Q Consensus 26 ~~~~~~ei~~l~~l~h--p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~ 102 (218)
...+.+|...+..+.. -.++..+.+...........++|++++++. +|.+++..... .+......++.+++..
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHH
Confidence 3467778877777743 335555666555333234568999999874 79999986432 5666778899999999
Q ss_pred HHHhhcCCCCcccCCCCCCcEEEecCC---cEEEeecCcccc
Q psy238 103 LSYLHSCSPPIIHGNLTCDTIFIQHNG---LVKIGCDTYTHT 141 (218)
Q Consensus 103 l~~lH~~~~~iiH~dlkp~NiLl~~~~---~~ki~dfg~~~~ 141 (218)
+.-||. .||+|+|++|.|||++.++ .+.++||+-+..
T Consensus 131 i~~lH~--~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 131 IAKLHD--AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHH--CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999 7799999999999999887 899999987664
No 443
>KOG1033|consensus
Probab=99.03 E-value=3.8e-11 Score=101.63 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=78.1
Q ss_pred eEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcc
Q psy238 60 RVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139 (218)
Q Consensus 60 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~ 139 (218)
++|+.|++|.-.+|.+||..... ....++.....++.|++.|+.| ++.+|+|++|.||+...+..++|.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y-----k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY-----KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh-----ccchhhhccccccccccchhhhhhhhhhe
Confidence 58899999999999999975543 2457788999999999999999 34999999999999999999999999986
Q ss_pred cc--------------ccCCCccccccccc
Q psy238 140 HT--------------IENKKYLSATRQTY 155 (218)
Q Consensus 140 ~~--------------~~~~~t~~y~aPE~ 155 (218)
.. ....||.+||+||.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ 433 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQ 433 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHH
Confidence 54 45688999999995
No 444
>KOG3741|consensus
Probab=99.01 E-value=1.7e-09 Score=92.03 Aligned_cols=131 Identities=18% Similarity=0.222 Sum_probs=98.9
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCC-CCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSS-GSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~ 81 (218)
..||..|++|+++.....+ ....-.-+++++++.|+|||++.++|.....+...+++|++|+++ ++|.++.-...
T Consensus 298 ~~DG~~YvLkRlhg~r~~~----~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~ 373 (655)
T KOG3741|consen 298 NVDGNAYVLKRLHGDRDQS----TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANP 373 (655)
T ss_pred ccCCceeeeeeeccccccC----cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCC
Confidence 4588999999995321111 112234577899999999999999988555555679999999875 46777543322
Q ss_pred -----------ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcc
Q psy238 82 -----------RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139 (218)
Q Consensus 82 -----------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~ 139 (218)
.++...++...|.++.|+..||.++|+ .|+..+-|.|.+||+..+.+++|+.-|+.
T Consensus 374 ~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs--sGLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 374 PFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS--SGLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh--cCceeecccHhHeEeeCcceEEEecccce
Confidence 122347889999999999999999999 66999999999999998888888755543
No 445
>KOG0590|consensus
Probab=98.99 E-value=6.8e-11 Score=104.85 Aligned_cols=161 Identities=15% Similarity=0.123 Sum_probs=119.6
Q ss_pred EEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHH-hhcccCC
Q psy238 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLK-RTKRNVK 85 (218)
Q Consensus 8 ~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~-~~~~~~~ 85 (218)
.+|.+.+.... ........+..|..+-..+. |+|++.+++...+.. ..++++++..|+++.+.+. ... .
T Consensus 48 ~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~----~~~~~~~~s~g~~~f~~i~~~~~---~ 118 (601)
T KOG0590|consen 48 SSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR----SYLLSLSYSDGGSLFSKISHPDS---T 118 (601)
T ss_pred eeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCc----ccccccCcccccccccccccCCc---c
Confidence 45666555432 22334445555666666665 999999998876654 4789999999999988883 322 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh-cCCCCcccCCCCCCcEEEecCC-cEEEeecCcccc-----------ccCCC-ccccc
Q psy238 86 KLPLSAWKRWCSQILSALSYLH-SCSPPIIHGNLTCDTIFIQHNG-LVKIGCDTYTHT-----------IENKK-YLSAT 151 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH-~~~~~iiH~dlkp~NiLl~~~~-~~ki~dfg~~~~-----------~~~~~-t~~y~ 151 (218)
..+...+-.++.|+..++.|+| . .++.|+|++|+|.+++..+ .++++|||++.. ...+| ++.|+
T Consensus 119 ~~~~~~~~~~~~ql~s~l~~~H~~--~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~ 196 (601)
T KOG0590|consen 119 GTSSSSASRYLPQLNSGLSYLHPE--NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYG 196 (601)
T ss_pred CCCCcchhhhhhhhccCccccCcc--cccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCC
Confidence 3667788899999999999999 7 6699999999999999999 999999999876 34577 99999
Q ss_pred ccccCCC--C-----------chhhhhhhCCCCCCcchhhh
Q psy238 152 RQTYGRP--I-----------SGQYEIVTKTNNVTEKKKEK 179 (218)
Q Consensus 152 aPE~~~~--~-----------~~~~ei~tg~~p~~~~~~ee 179 (218)
|||+... + ..+.-+++|..|+.......
T Consensus 197 a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~ 237 (601)
T KOG0590|consen 197 APEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD 237 (601)
T ss_pred CcccccchhhcCCCcccccccccccccccCCCCcccccccc
Confidence 9997332 1 11466778888887555444
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.95 E-value=1.8e-09 Score=83.94 Aligned_cols=128 Identities=15% Similarity=0.195 Sum_probs=86.9
Q ss_pred CCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCC--CcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 5 ~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~h--p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
+|..+++|........ .....+..|..++..+.+ .++.+++.+..... ..+..++||+|++|.++.+.+..
T Consensus 21 ~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~-~~~~~~~v~e~i~G~~l~~~~~~--- 93 (223)
T cd05154 21 GGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS-VLGTPFYVMERVDGRVLRDRLLR--- 93 (223)
T ss_pred CCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC-ccCCceEEEEEeCCEecCCCCCC---
Confidence 3678999987643111 134467889999988865 44566776655432 11346899999998877665421
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCC----------------------------------------------------
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCS---------------------------------------------------- 110 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~---------------------------------------------------- 110 (218)
..++......++.+++.+|..||+..
T Consensus 94 --~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (223)
T cd05154 94 --PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPAD 171 (223)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCC
Confidence 12555566666666666666666421
Q ss_pred --CCcccCCCCCCcEEEec--CCcEEEeecCcccc
Q psy238 111 --PPIIHGNLTCDTIFIQH--NGLVKIGCDTYTHT 141 (218)
Q Consensus 111 --~~iiH~dlkp~NiLl~~--~~~~ki~dfg~~~~ 141 (218)
..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 172 ~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 172 SRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred CCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 34689999999999998 67789999987664
No 447
>KOG0606|consensus
Probab=98.92 E-value=7.6e-10 Score=100.53 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=67.2
Q ss_pred HHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-----------------------ccCCCccccccccc-
Q psy238 100 LSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-----------------------IENKKYLSATRQTY- 155 (218)
Q Consensus 100 ~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-----------------------~~~~~t~~y~aPE~- 155 (218)
+.+++|||+ .||+|||++|+|.||..-|++++.|||++.. ...+||+.|.|||+
T Consensus 153 vla~Eylh~--ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi 230 (1205)
T KOG0606|consen 153 VLAVEYLHS--YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI 230 (1205)
T ss_pred hHHhHhhcc--CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence 788999999 5599999999999999999999999998765 34689999999997
Q ss_pred -----CCCCch------hhhhhhCCCCCCcchhhhh
Q psy238 156 -----GRPISG------QYEIVTKTNNVTEKKKEKE 180 (218)
Q Consensus 156 -----~~~~~~------~~ei~tg~~p~~~~~~ee~ 180 (218)
|.+++. +|+.+-|..||.+...||.
T Consensus 231 lrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel 266 (1205)
T KOG0606|consen 231 LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL 266 (1205)
T ss_pred hhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH
Confidence 334443 7999999999998855553
No 448
>PRK09902 hypothetical protein; Provisional
Probab=98.80 E-value=7.7e-08 Score=74.18 Aligned_cols=132 Identities=13% Similarity=0.088 Sum_probs=91.4
Q ss_pred CcEEEEEEeecc-cc-cccHHHHHHHHHHHHHhhcCCC--CcccceeeeeecCCCCCCeEEEEEeccCC-CCHHHHHHhh
Q psy238 6 GVEVVWNEVQFS-ER-KNFKAQEEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRVIFITEYMSS-GSLKQFLKRT 80 (218)
Q Consensus 6 g~~vAvK~~~~~-~~-~~~~~~~~~~~~ei~~l~~l~h--p~iv~l~~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~ 80 (218)
|..+-+|.-... .. ...+.....+.+|+..|..+.. ..++.+..+..........-+||++-++| .+|.+++...
T Consensus 41 g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~ 120 (216)
T PRK09902 41 GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH 120 (216)
T ss_pred CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcC
Confidence 345777765411 00 0113355688999999888853 22555542222333334567899998743 5899988664
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCc--EEEeecCcccc
Q psy238 81 KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGL--VKIGCDTYTHT 141 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~--~ki~dfg~~~~ 141 (218)
.- .+.+......++.+++..+.-||+ .|+.|+|+.+.|||++.++. +.++||--++.
T Consensus 121 ~~--~~~~~~~k~~il~~va~~ia~LH~--~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 121 AV--SPYSDEVRQAMLKAVALAFKKMHS--VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred Cc--CCcchHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 32 345677778899999999999999 77999999999999986666 99999976654
No 449
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.70 E-value=1.5e-07 Score=73.00 Aligned_cols=66 Identities=18% Similarity=0.333 Sum_probs=51.9
Q ss_pred EEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccc
Q psy238 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTH 140 (218)
Q Consensus 61 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~ 140 (218)
.++||||++|..|.++.. ++. .+...++.++.-||. .|+.|+|++|.|++++.++ ++++||+...
T Consensus 118 ~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~--~G~~HGD~hpgNFlv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 118 YVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHK--HGFYHGDPHPGNFLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred EEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHH--cCCccCCCCcCcEEEECCc-EEEEECcccc
Confidence 568999999988876543 332 234567788999999 7799999999999998655 8899998665
Q ss_pred c
Q psy238 141 T 141 (218)
Q Consensus 141 ~ 141 (218)
.
T Consensus 183 ~ 183 (229)
T PF06176_consen 183 M 183 (229)
T ss_pred c
Confidence 4
No 450
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.59 E-value=1.2e-07 Score=75.14 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=77.9
Q ss_pred CCCcEEEEEEeecccccccHH-------------------HHHHHHHHHHHhhcCCCC--cccceeeeeecCCCCCCeEE
Q psy238 4 EEGVEVVWNEVQFSERKNFKA-------------------QEEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRVI 62 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~-------------------~~~~~~~ei~~l~~l~hp--~iv~l~~~~~~~~~~~~~~~ 62 (218)
..|..+|||.-... ..++.. ....+.+|+++|+.+... .++..+++- +-.
T Consensus 113 ~~g~~~~vKfHR~G-rtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~n--------RHa 183 (304)
T COG0478 113 PKGRKVAVKFHRLG-RTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAWN--------RHA 183 (304)
T ss_pred CCCCEEEEEEeecC-chhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCccccc--------cce
Confidence 35888999865532 122111 234567899999999755 577776553 358
Q ss_pred EEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccc
Q psy238 63 FITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTH 140 (218)
Q Consensus 63 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~ 140 (218)
+|||+++|..|...- +.....-.++..|+.-+.-+-. .||||+|+.+-|||+++||.+.++||--+.
T Consensus 184 VvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~--~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 184 VVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYR--RGIVHGDLSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred eeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHH--cCccccCCchheEEEecCCCEEEEeCcccc
Confidence 999999876664432 1122233344444444444446 569999999999999999999999995443
No 451
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.58 E-value=1.4e-07 Score=82.22 Aligned_cols=69 Identities=9% Similarity=0.120 Sum_probs=50.1
Q ss_pred EEEEEeccCCCCHHHHHHhhcccCCCCCH-----HHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEee
Q psy238 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPL-----SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135 (218)
Q Consensus 61 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~-----~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~d 135 (218)
-.++|||++|..+.++...... ..+. ..+..++.|++ . .|++|+|.+|.||+++.+|.+.+.|
T Consensus 241 ~VLtmE~i~Gi~i~d~~~l~~~---g~d~k~ia~~~~~~f~~q~~-------~--dgffHaDpHpGNi~v~~~g~i~~lD 308 (517)
T COG0661 241 RVLTMEWIDGIKISDIAALKSA---GIDRKELAELLVRAFLRQLL-------R--DGFFHADPHPGNILVRSDGRIVLLD 308 (517)
T ss_pred cEEEEEeeCCEecccHHHHHhc---CCCHHHHHHHHHHHHHHHHH-------h--cCccccCCCccceEEecCCcEEEEc
Confidence 5899999999999888543321 1332 22223333332 2 5699999999999999999999999
Q ss_pred cCcccc
Q psy238 136 DTYTHT 141 (218)
Q Consensus 136 fg~~~~ 141 (218)
||+...
T Consensus 309 fGi~g~ 314 (517)
T COG0661 309 FGIVGR 314 (517)
T ss_pred Ccceec
Confidence 998765
No 452
>KOG0601|consensus
Probab=98.55 E-value=8.8e-08 Score=82.60 Aligned_cols=126 Identities=19% Similarity=0.108 Sum_probs=93.2
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
..++..|++|.+... .........-..|+.+...+ .|.+++.++..|.... ..|+-.|||.++++...+.-.
T Consensus 288 ~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r----~~~ip~e~~~~~s~~l~~~~~- 360 (524)
T KOG0601|consen 288 PEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR----QGYIPLEFCEGGSSSLRSVTS- 360 (524)
T ss_pred CCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc----cccCchhhhcCcchhhhhHHH-
Confidence 467788999877632 22222233334566665555 5888888766665533 367999999988877766322
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCccc
Q psy238 82 RNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTH 140 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~ 140 (218)
..+.+...+.+..|++.++.++|+ ..++|+|++|+||++..+ +..++.|||...
T Consensus 361 ---~~~d~~~~~~~~~q~~~~l~~i~s--~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 361 ---QMLDEDPRLRLTAQILTALNVIHS--KLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ---HhcCcchhhhhHHHHHhccccccc--hhhhcccccccceeeccchhhhhcccccccc
Confidence 237778889999999999999999 669999999999999876 888899999875
No 453
>KOG0601|consensus
Probab=98.49 E-value=1.3e-07 Score=81.60 Aligned_cols=143 Identities=18% Similarity=0.150 Sum_probs=106.5
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcC-CCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhc
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTK 81 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l-~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~ 81 (218)
.+++..+|+|.-+.. ...+.....-.+++.....+ .|++.++.+..+... +.+++-+|++ +.+|..+.....
T Consensus 140 ~~s~~~~a~k~s~~p--~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~----~~lfiqtE~~-~~sl~~~~~~~~ 212 (524)
T KOG0601|consen 140 SESPHKFAVKKSKIP--FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS----GILFIQTELC-GESLQSYCHTPC 212 (524)
T ss_pred ccCCcccccccccCC--CCCccccccccchhhcccccCccccccccCcccccC----Ccceeeeccc-cchhHHhhhccc
Confidence 467778888874321 22222333334566655666 589999876666554 4689999998 578888887653
Q ss_pred ccCCCCCHHHHHHHHHHHHH----HHHHhhcCCCCcccCCCCCCcEEEecC-CcEEEeecCcccc-------------cc
Q psy238 82 RNVKKLPLSAWKRWCSQILS----ALSYLHSCSPPIIHGNLTCDTIFIQHN-GLVKIGCDTYTHT-------------IE 143 (218)
Q Consensus 82 ~~~~~~~~~~~~~~~~qi~~----~l~~lH~~~~~iiH~dlkp~NiLl~~~-~~~ki~dfg~~~~-------------~~ 143 (218)
..+|...++..+.+... ||.++|+ .+++|-|++|.||++..+ ..++++|||+... ..
T Consensus 213 ---~~~p~~~l~~~~~~~~~~~~~al~~~hs--~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r 287 (524)
T KOG0601|consen 213 ---NFLPDNLLWNSLRDWLSRDVTALSHLHS--NNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKR 287 (524)
T ss_pred ---ccCCchhhhhHHhhhhhcccccccccCC--CcccccccchhheecccccceeecCCcceeEEccCCccccceeeeec
Confidence 34888899999999999 9999999 669999999999999999 8999999997654 12
Q ss_pred CCCcccccccccCC
Q psy238 144 NKKYLSATRQTYGR 157 (218)
Q Consensus 144 ~~~t~~y~aPE~~~ 157 (218)
..+...|++||+..
T Consensus 288 ~~~~~~Y~~ke~~~ 301 (524)
T KOG0601|consen 288 PEGDCIYAAKELLN 301 (524)
T ss_pred CCCCceEeChhhhc
Confidence 26778899999733
No 454
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.39 E-value=3.3e-06 Score=66.39 Aligned_cols=125 Identities=10% Similarity=0.077 Sum_probs=67.4
Q ss_pred CcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCc--ccceeeeeecCCCCCCeEEEEEeccCCCC-HH--------
Q psy238 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPN--IVKFHRYWTDTHNDKPRVIFITEYMSSGS-LK-------- 74 (218)
Q Consensus 6 g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~--iv~l~~~~~~~~~~~~~~~lv~e~~~~~s-L~-------- 74 (218)
|..+++|..... .....+.+|.+++..+..-+ +.+.+.+..+.+ ..++||++++|.+ +.
T Consensus 22 ~~~~VlR~~~~~------~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~----~~glv~e~i~G~~~~~~~~~~~~~ 91 (226)
T TIGR02172 22 TGKWMLKLYNPG------FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGG----RLGLIYELIVGKRSFSRIISDNPS 91 (226)
T ss_pred CCCEEEEeCCCC------CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC----eeeeeeeecCCccchhhhhcCCHH
Confidence 456777877531 12234678888888875433 456666654433 4688999998753 11
Q ss_pred ------HHHHh----hcc-cCCCCCHHHHHH-HHH----------HHHH-HHHHhh--cCCCCcccCCCCCCcEEEecCC
Q psy238 75 ------QFLKR----TKR-NVKKLPLSAWKR-WCS----------QILS-ALSYLH--SCSPPIIHGNLTCDTIFIQHNG 129 (218)
Q Consensus 75 ------~~l~~----~~~-~~~~~~~~~~~~-~~~----------qi~~-~l~~lH--~~~~~iiH~dlkp~NiLl~~~~ 129 (218)
..+.. -.. .....+...... +.. .+.. ...+|. .....++|+|+.|.||+++.++
T Consensus 92 ~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~ 171 (226)
T TIGR02172 92 RLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKG 171 (226)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCC
Confidence 11111 000 000111111111 100 0111 111222 2113578999999999999888
Q ss_pred cEEEeecCcccc
Q psy238 130 LVKIGCDTYTHT 141 (218)
Q Consensus 130 ~~ki~dfg~~~~ 141 (218)
+.|+||+.+..
T Consensus 172 -~~iIDwe~a~~ 182 (226)
T TIGR02172 172 -TYWIDLGDFGY 182 (226)
T ss_pred -cEEEechhcCc
Confidence 99999987654
No 455
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.33 E-value=2.6e-06 Score=65.11 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=76.8
Q ss_pred HHHHHHhhcCCC-CcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhc
Q psy238 30 QQVFENLTQLEH-PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS 108 (218)
Q Consensus 30 ~~ei~~l~~l~h-p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 108 (218)
..|.-+|+.+.+ +++++++|+|-. ++|.|+...+++.... .........++..+..++.+++..+.++++
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--------~~v~E~~~~~~~~~~~-~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--------FYVVEYVGAGSLYGIY-RPLSQFLQSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--------EEEEEeecCccccccc-cccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 357777888865 699999999932 6788998766554320 000011237899999999999999999986
Q ss_pred -CCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 109 -CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 109 -~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
....+.-+|++|+|+.+++++.++++|......
T Consensus 78 ~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred CCCCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence 212356699999999999999999999886544
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.27 E-value=7.5e-06 Score=64.46 Aligned_cols=95 Identities=17% Similarity=0.225 Sum_probs=64.7
Q ss_pred HHHHHhhcCC--CCcccceeeeeecCCCCCCeEEEEEeccCCC-CHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhh
Q psy238 31 QVFENLTQLE--HPNIVKFHRYWTDTHNDKPRVIFITEYMSSG-SLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLH 107 (218)
Q Consensus 31 ~ei~~l~~l~--hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 107 (218)
.|+..|.++. +-.+++.+.+.. -.+||||+... .-.-.|... ++....+..+..+++..+.-|-
T Consensus 117 kEf~NL~R~~eAGVrvP~Pi~~~~--------nVLvMEfIg~~g~pAP~LkDv-----~~e~~e~~~~~~~~v~~~~~l~ 183 (268)
T COG1718 117 KEFRNLKRAYEAGVRVPEPIAFRN--------NVLVMEFIGDDGLPAPRLKDV-----PLELEEAEGLYEDVVEYMRRLY 183 (268)
T ss_pred HHHHHHHHHHHcCCCCCCceeecC--------CeEEEEeccCCCCCCCCcccC-----CcCchhHHHHHHHHHHHHHHHH
Confidence 4666676663 344555555542 48999999432 111112111 1333367778888999888887
Q ss_pred c-CCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 108 S-CSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 108 ~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
. ++ +||+||+.-|||+. ++.+.|+|++-+-.
T Consensus 184 ~~a~--LVHgDLSEyNiL~~-~~~p~iID~~QaV~ 215 (268)
T COG1718 184 KEAG--LVHGDLSEYNILVH-DGEPYIIDVSQAVT 215 (268)
T ss_pred HhcC--cccccchhhheEEE-CCeEEEEECccccc
Confidence 6 55 99999999999999 89999999987654
No 457
>KOG0606|consensus
Probab=98.24 E-value=7.5e-07 Score=81.61 Aligned_cols=114 Identities=16% Similarity=0.149 Sum_probs=90.3
Q ss_pred CeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCc
Q psy238 59 PRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTY 138 (218)
Q Consensus 59 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~ 138 (218)
...++|++|+.+++|...++..+ +.+..-++.++..++.++++||+ ..++|+|++|.|+|+..++...++||+.
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s--~~r~h~~~~p~~~l~~~~gh~~l~~~~t 950 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLHS--SLRKHRDLKPDSLLIAYDGHRPLTDFGT 950 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhcccc--chhhcccccccchhhcccCCcccCcccc
Confidence 35899999999999999998764 36666778888899999999999 5599999999999999999999999872
Q ss_pred ccc---------------------------------------ccCCCccccccccc--CC----CC------chhhhhhh
Q psy238 139 THT---------------------------------------IENKKYLSATRQTY--GR----PI------SGQYEIVT 167 (218)
Q Consensus 139 ~~~---------------------------------------~~~~~t~~y~aPE~--~~----~~------~~~~ei~t 167 (218)
... ....+|..|.+||. +. +. ..+++.++
T Consensus 951 ~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~ 1030 (1205)
T KOG0606|consen 951 LSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLT 1030 (1205)
T ss_pred ccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhc
Confidence 111 23567999999995 11 11 11789999
Q ss_pred CCCCCCcchhh
Q psy238 168 KTNNVTEKKKE 178 (218)
Q Consensus 168 g~~p~~~~~~e 178 (218)
|..||+....+
T Consensus 1031 g~pp~na~tpq 1041 (1205)
T KOG0606|consen 1031 GIPPFNAETPQ 1041 (1205)
T ss_pred CCCCCCCcchh
Confidence 99999865444
No 458
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.17 E-value=1.4e-05 Score=62.26 Aligned_cols=128 Identities=16% Similarity=0.191 Sum_probs=66.2
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCC--cccceeeeeecCCCCCCeEEEEEeccCCCCHHH---------
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQ--------- 75 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp--~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~--------- 75 (218)
..+++|.... ......+..|..++..+... .+..++.+.... ...+..+++|++++|.++..
T Consensus 21 ~~~vlK~~~~------~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 93 (239)
T PF01636_consen 21 GRYVLKFYRP------PDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD-EFNGFPYLLMEYIPGRPLDDELSPEQRPE 93 (239)
T ss_dssp SEEEEEEESS------HHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET-EETSEEEEEEEEESSEEHHHTSTHHHHHH
T ss_pred cEEEEEEeCC------CCCHHHHHHHHHHHHHHHhcCCCCceEEeecccc-cccccceEEEEEecccccccccccccccc
Confidence 5889998762 13455667787777777422 356666544332 22345789999999887777
Q ss_pred -------HHHhhcc---cCCCCCHHH---------HHHH------------HHHHHH-HHHHhhc-----CCCCcccCCC
Q psy238 76 -------FLKRTKR---NVKKLPLSA---------WKRW------------CSQILS-ALSYLHS-----CSPPIIHGNL 118 (218)
Q Consensus 76 -------~l~~~~~---~~~~~~~~~---------~~~~------------~~qi~~-~l~~lH~-----~~~~iiH~dl 118 (218)
.+..-.. ...++.... .... ...+.. .+..++. ....++|+|+
T Consensus 94 ~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~ 173 (239)
T PF01636_consen 94 LLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIHGDL 173 (239)
T ss_dssp HHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-
T ss_pred ccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEecc
Confidence 2222111 011111100 0000 001111 2233321 1145899999
Q ss_pred CCCcEEEe-cCCcEEEeecCcccc
Q psy238 119 TCDTIFIQ-HNGLVKIGCDTYTHT 141 (218)
Q Consensus 119 kp~NiLl~-~~~~~ki~dfg~~~~ 141 (218)
.|.|||++ .++.+.|+||+.+..
T Consensus 174 ~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 174 HPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp SGGGEEEESSTTEEEE--GTT-EE
T ss_pred ccccceeeeccceeEEEecccceE
Confidence 99999999 566668999987654
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.05 E-value=5.4e-05 Score=60.00 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=27.0
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
..++|+|+.|.|||++.+..+.|+||+.+..
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 3489999999999999988888999987754
No 460
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=97.96 E-value=8.2e-05 Score=62.83 Aligned_cols=114 Identities=10% Similarity=0.074 Sum_probs=84.0
Q ss_pred eEEEEEeccCCC-CHHHHHHhh--cccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeec
Q psy238 60 RVIFITEYMSSG-SLKQFLKRT--KRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCD 136 (218)
Q Consensus 60 ~~~lv~e~~~~~-sL~~~l~~~--~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~df 136 (218)
.+.++|..++|. .+.+++... +..+..+.++.+++.++.++.+..-||. .|-+-+|+.++|+|+++++.+.|+|-
T Consensus 84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~--~Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE--HGHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh--cCCcccccCccceeeecCceEEEEcc
Confidence 477889988764 333333322 1233457889999999999999999999 77999999999999999999999885
Q ss_pred Ccccc-------ccCCCcccccccccCCCCch-----------------hhhhhhC-CCCCCcc
Q psy238 137 TYTHT-------IENKKYLSATRQTYGRPISG-----------------QYEIVTK-TNNVTEK 175 (218)
Q Consensus 137 g~~~~-------~~~~~t~~y~aPE~~~~~~~-----------------~~ei~tg-~~p~~~~ 175 (218)
..-.. ....|...|.+||+-...+. .++++.| +.||.+.
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 43222 45678899999997331111 5777666 9999764
No 461
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.94 E-value=7.8e-05 Score=58.83 Aligned_cols=31 Identities=19% Similarity=0.233 Sum_probs=26.1
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.|.|||++.+...-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3489999999999998776677999997654
No 462
>PLN02876 acyl-CoA dehydrogenase
Probab=97.92 E-value=4.2e-05 Score=71.02 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=39.3
Q ss_pred cEEEEEEeecccccccHHHHHHHHHHHHHhhcCC-CCc--ccceeeeeecCCCCCCeEEEEEeccCCCC
Q psy238 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPN--IVKFHRYWTDTHNDKPRVIFITEYMSSGS 72 (218)
Q Consensus 7 ~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~-hp~--iv~l~~~~~~~~~~~~~~~lv~e~~~~~s 72 (218)
..+++++...... ......+.+|+.+|..+. |++ +++++.++.+... .+..|+||||++|..
T Consensus 66 ~~~VLR~~p~~~~---~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v-~G~~flVME~v~G~~ 130 (822)
T PLN02876 66 KRYVLRKKPPGKL---LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASV-IGTAFYIMEYLEGRI 130 (822)
T ss_pred eeEEEEeCCCCcc---CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCc-CCCceEEEEecCCcc
Confidence 3577776653211 112346778999999885 565 4777777765321 234689999998754
No 463
>KOG2270|consensus
Probab=97.72 E-value=0.00028 Score=58.92 Aligned_cols=121 Identities=19% Similarity=0.210 Sum_probs=78.8
Q ss_pred CCCCcEEEEEEeecccc--------------------cccHHHHHHH--HHHHHHhhcCCCCcccceeeeeecCCCCCCe
Q psy238 3 TEEGVEVVWNEVQFSER--------------------KNFKAQEEKI--QQVFENLTQLEHPNIVKFHRYWTDTHNDKPR 60 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~--------------------~~~~~~~~~~--~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~ 60 (218)
..+|..+|||+++-+=. ...+..+-.. ..|+..|.+++..+|.-.--+....
T Consensus 165 ~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~PePIlLk~------ 238 (520)
T KOG2270|consen 165 EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCPEPILLKN------ 238 (520)
T ss_pred cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec------
Confidence 35788999999883210 1111112222 3467777777766654433333321
Q ss_pred EEEEEeccCCCCHHH--HHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCcccCCCCCCcEEEecCCcEEEeecC
Q psy238 61 VIFITEYMSSGSLKQ--FLKRTKRNVKKLPLSAWKRWCSQILSALSYLHS-CSPPIIHGNLTCDTIFIQHNGLVKIGCDT 137 (218)
Q Consensus 61 ~~lv~e~~~~~sL~~--~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~iiH~dlkp~NiLl~~~~~~ki~dfg 137 (218)
-.|||+|+. .+-+. .|.. -.++...+..+-.|++.-+.-|.. |. +||.||.--|+|+ .+|.+.|+|-+
T Consensus 239 hVLVM~FlG-rdgw~aPkLKd-----~~ls~~ka~~~Y~~~v~~MR~lY~~c~--LVHADLSEfN~Ly-hdG~lyiIDVS 309 (520)
T KOG2270|consen 239 HVLVMEFLG-RDGWAAPKLKD-----ASLSTSKARELYQQCVRIMRRLYQKCR--LVHADLSEFNLLY-HDGKLYIIDVS 309 (520)
T ss_pred ceEeeeecc-CCCCcCccccc-----ccCChHHHHHHHHHHHHHHHHHHHHhc--eeccchhhhhheE-ECCEEEEEEcc
Confidence 379999993 33322 2222 236777888888899999998876 77 9999999999998 45788898866
Q ss_pred c
Q psy238 138 Y 138 (218)
Q Consensus 138 ~ 138 (218)
-
T Consensus 310 Q 310 (520)
T KOG2270|consen 310 Q 310 (520)
T ss_pred c
Confidence 3
No 464
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.71 E-value=0.00012 Score=58.57 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=25.3
Q ss_pred CcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 112 PIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.++|+|+.|.|||++.++ +.|+||..+..
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 489999999999999877 78999987664
No 465
>KOG1235|consensus
Probab=97.69 E-value=0.00032 Score=61.47 Aligned_cols=74 Identities=7% Similarity=0.050 Sum_probs=50.3
Q ss_pred EEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec----CCcEEEeec
Q psy238 61 VIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH----NGLVKIGCD 136 (218)
Q Consensus 61 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~----~~~~ki~df 136 (218)
-.|+||||+|..+.++-.-.. ..++...+...+.++..-+-+. .|++|+|-+|.||++.. ++.+.+.||
T Consensus 277 RVLtME~~~G~~i~Dl~~i~~---~gi~~~~i~~~l~~~~~~qIf~----~GffHaDPHPGNilv~~~~~~~~~ivllDh 349 (538)
T KOG1235|consen 277 RVLTMEYVDGIKINDLDAIDK---RGISPHDILNKLVEAYLEQIFK----TGFFHADPHPGNILVRPNPEGDEEIVLLDH 349 (538)
T ss_pred eEEEEEecCCccCCCHHHHHH---cCCCHHHHHHHHHHHHHHHHHh----cCCccCCCCCCcEEEecCCCCCccEEEEcc
Confidence 689999999987766533222 1255554444333333222222 55999999999999984 689999999
Q ss_pred Ccccc
Q psy238 137 TYTHT 141 (218)
Q Consensus 137 g~~~~ 141 (218)
|+...
T Consensus 350 Gl~~~ 354 (538)
T KOG1235|consen 350 GLYAV 354 (538)
T ss_pred ccccc
Confidence 98765
No 466
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=97.64 E-value=0.00015 Score=60.33 Aligned_cols=84 Identities=18% Similarity=0.114 Sum_probs=62.5
Q ss_pred CCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEee
Q psy238 56 NDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGC 135 (218)
Q Consensus 56 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~d 135 (218)
.+..+.|++|++- |++|.. +.. -...++..++.+.+..+.-+... -..-|||+.-.||||+ +|++.|+|
T Consensus 296 de~~y~yl~~kdh-gt~is~-ik~-------~~~~e~lsff~s~~sil~~lekk-f~fehrnlt~~niLId-~GnvtLID 364 (488)
T COG5072 296 DETLYLYLHFKDH-GTPISI-IKA-------DRSEEELSFFWSCISILDILEKK-FPFEHRNLTLDNILID-EGNVTLID 364 (488)
T ss_pred CCceEEEEEEecC-Cceeee-eec-------ccHHHHHHHHHHHHHHHhhhhhc-CCcccccccccceeee-cCceEEEE
Confidence 3345778899885 555543 221 34578888999988877777762 3489999999999999 99999999
Q ss_pred cCccccccCCCcccc
Q psy238 136 DTYTHTIENKKYLSA 150 (218)
Q Consensus 136 fg~~~~~~~~~t~~y 150 (218)
|.+++.....+...|
T Consensus 365 fklsRl~~~q~~isy 379 (488)
T COG5072 365 FKLSRLSYSQGIISY 379 (488)
T ss_pred eeeeecccCCceeec
Confidence 999987555554444
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.59 E-value=0.0017 Score=49.95 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhcC------CCCcccceeeeeecCCCCCCeEEEEEeccC------CCCHHHHHHhhcccCCCCCHHHHHH
Q psy238 27 EKIQQVFENLTQL------EHPNIVKFHRYWTDTHNDKPRVIFITEYMS------SGSLKQFLKRTKRNVKKLPLSAWKR 94 (218)
Q Consensus 27 ~~~~~ei~~l~~l------~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~------~~sL~~~l~~~~~~~~~~~~~~~~~ 94 (218)
....+|+.-...+ .+.+|.+++|+...+.. ..+|+|.+. ..||.+++... .++. ....
T Consensus 56 ~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G----~Glv~e~I~d~dG~~s~TL~~~l~~~-----~~~~-~~~~ 125 (199)
T PF10707_consen 56 RQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLG----LGLVVELIRDADGNISPTLEDYLKEG-----GLTE-ELRQ 125 (199)
T ss_pred HHHHHHHHHHHHHhhccCCcccccccEeEEEecCCc----eEEEEEEEECCCCCcCccHHHHHHcC-----CccH-HHHH
Confidence 3444555443333 47889999999876542 567777652 24788888543 2554 3333
Q ss_pred HHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecC--C--cEEEee
Q psy238 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHN--G--LVKIGC 135 (218)
Q Consensus 95 ~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~--~--~~ki~d 135 (218)
.+.++ ..||-+ .+|+.+|++|.||++... + .+.|+|
T Consensus 126 ~L~~f---~~~l~~--~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 126 ALDEF---KRYLLD--HHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHHH---HHHHHH--cCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 33333 456666 669999999999999643 2 577777
No 468
>KOG2268|consensus
Probab=97.56 E-value=0.00012 Score=60.14 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=65.8
Q ss_pred HHHHHHHHhhcCCC--CcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Q psy238 28 KIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSY 105 (218)
Q Consensus 28 ~~~~ei~~l~~l~h--p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 105 (218)
.+.+|+..|+.+.. -.++..+++. +-|+||+++.|.+|....+-. +.++ +...+..-+--
T Consensus 156 aa~kEfafmkaL~e~gfpVPkpiD~~--------RH~Vvmelv~g~Pl~~v~~v~-------d~~~---ly~~lm~~Iv~ 217 (465)
T KOG2268|consen 156 AATKEFAFMKALYERGFPVPKPIDHN--------RHCVVMELVDGYPLRQVRHVE-------DPPT---LYDDLMGLIVR 217 (465)
T ss_pred HHHHHHHHHHHHHHcCCCCCCccccc--------ceeeHHHhhcccceeeeeecC-------ChHH---HHHHHHHHHHH
Confidence 45678888888853 3355555544 459999999988887655322 2222 22333334555
Q ss_pred hhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 106 LHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 106 lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
|.. +|+||+|+.--||++.+++.+.++||--+-+
T Consensus 218 la~--~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 218 LAN--HGLIHGDFNEFNIMVKDDDKIVVIDFPQMVS 251 (465)
T ss_pred HHH--cCceecccchheeEEecCCCEEEeechHhhc
Confidence 667 7799999999999999999999999975433
No 469
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.40 E-value=0.00049 Score=56.07 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=27.4
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4699999999999999988788999987765
No 470
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.33 E-value=0.002 Score=53.07 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=28.0
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
..++|+|+.+.|++++.+.-+=|.||+.+..
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l 228 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATL 228 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence 4589999999999999988899999998876
No 471
>PRK05231 homoserine kinase; Provisional
Probab=97.26 E-value=0.0095 Score=49.10 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=27.1
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.|.|||++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 5799999999999999776668999998765
No 472
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.26 E-value=0.002 Score=52.72 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=27.4
Q ss_pred CCcccCCCCCCcEEEecC----CcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHN----GLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~----~~~ki~dfg~~~~ 141 (218)
.+++|+|+.|.|||++.+ +.+.++||..+..
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 458999999999999875 8899999998875
No 473
>KOG2137|consensus
Probab=97.18 E-value=0.00022 Score=63.28 Aligned_cols=67 Identities=18% Similarity=0.228 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCccccc-----------------cCCCcccccc
Q psy238 90 SAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHTI-----------------ENKKYLSATR 152 (218)
Q Consensus 90 ~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~~-----------------~~~~t~~y~a 152 (218)
+....=+.+++.|+.|+|.. .++||++|.|++|.++..+.++|+.|+++... -......|.|
T Consensus 99 e~~f~nl~~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~a 177 (700)
T KOG2137|consen 99 EDGFANLGNVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLA 177 (700)
T ss_pred cHhhhhhhcccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCccccc
Confidence 33444556788999999983 45999999999999999999999999977541 1234577899
Q ss_pred cccCC
Q psy238 153 QTYGR 157 (218)
Q Consensus 153 PE~~~ 157 (218)
||+..
T Consensus 178 pE~~~ 182 (700)
T KOG2137|consen 178 PEYLL 182 (700)
T ss_pred chhhc
Confidence 99743
No 474
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.10 E-value=0.003 Score=51.19 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=25.7
Q ss_pred CCcccCCCCCCcEEEecCCc-EEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGL-VKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~-~ki~dfg~~~~ 141 (218)
..++|+|+.|.|||++.++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 34899999999999997554 56999998776
No 475
>PRK10593 hypothetical protein; Provisional
Probab=97.02 E-value=0.0069 Score=49.66 Aligned_cols=46 Identities=15% Similarity=0.062 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhcCCC---CcccceeeeeecCCCCCCeEEEEEeccCCCCH
Q psy238 27 EKIQQVFENLTQLEH---PNIVKFHRYWTDTHNDKPRVIFITEYMSSGSL 73 (218)
Q Consensus 27 ~~~~~ei~~l~~l~h---p~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL 73 (218)
..+..|...|..+.. ..++++++++.+.. ..+..++|||+++|.++
T Consensus 52 ~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~-~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 52 GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ-SPGPDVLLLERLRGVSV 100 (297)
T ss_pred hHHHHHHHHHHHHccCCCCCcCcEEEEeccCC-cCCCeEEEEeccCCEec
Confidence 467788888887742 45778887775432 12357999999987654
No 476
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.02 E-value=0.005 Score=46.38 Aligned_cols=111 Identities=15% Similarity=0.044 Sum_probs=73.8
Q ss_pred CCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccc-eeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcc
Q psy238 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVK-FHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKR 82 (218)
Q Consensus 4 ~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~-l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~ 82 (218)
+.|..+|+|+-.. ......+..|.++|..+...++.+ ++.+.. .++.|+|+.|.+|..+....
T Consensus 43 ~~~~~~a~Kvrr~------ds~r~~l~kEakiLeil~g~~~~p~vy~yg~--------~~i~me~i~G~~L~~~~~~~-- 106 (201)
T COG2112 43 WRGGEVALKVRRR------DSPRRNLEKEAKILEILAGEGVTPEVYFYGE--------DFIRMEYIDGRPLGKLEIGG-- 106 (201)
T ss_pred ccCceEEEEEecC------CcchhhHHHHHHHHHHhhhcCCCceEEEech--------hhhhhhhhcCcchhhhhhcc--
Confidence 4677899998763 234567888999999887666544 444433 35669999988888876521
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCC-CCcEEEecCCcEEEeecCcccc
Q psy238 83 NVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLT-CDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 83 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlk-p~NiLl~~~~~~ki~dfg~~~~ 141 (218)
+.. -+..++..-.-|-. .||-|..|+ |..+++..+..+.|+||.-++.
T Consensus 107 -----~rk----~l~~vlE~a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 107 -----DRK----HLLRVLEKAYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred -----cHH----HHHHHHHHHHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 112 23344555333444 459998886 5556666666999999987764
No 477
>PRK06148 hypothetical protein; Provisional
Probab=96.95 E-value=0.031 Score=53.42 Aligned_cols=31 Identities=10% Similarity=0.079 Sum_probs=26.3
Q ss_pred CCcccCCCCCCcEEEecCC--cEE-EeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNG--LVK-IGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~--~~k-i~dfg~~~~ 141 (218)
.++||+|+.+.|||++.++ .+. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 5699999999999998875 455 999998765
No 478
>PLN02236 choline kinase
Probab=96.90 E-value=0.0049 Score=51.61 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=26.3
Q ss_pred CcccCCCCCCcEEEec-CCcEEEeecCcccc
Q psy238 112 PIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT 141 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~ 141 (218)
.++|+|+.+.|||++. ++.+.++||..+..
T Consensus 201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 201 GFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred eEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 5899999999999986 47899999988765
No 479
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.90 E-value=0.021 Score=48.76 Aligned_cols=29 Identities=21% Similarity=0.472 Sum_probs=24.4
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTH 140 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~ 140 (218)
..++|+|+.|.|||+..+ .++++||-++.
T Consensus 223 ~~l~HgDl~~gni~~~~~-~~~viD~E~a~ 251 (401)
T PRK09550 223 EALLHGDLHTGSIFVTEE-ETKVIDPEFAF 251 (401)
T ss_pred CceeeccCCcccEEeeCC-CcEEEeccccc
Confidence 458999999999999776 58899987655
No 480
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.82 E-value=0.0033 Score=49.16 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=56.9
Q ss_pred HHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhh
Q psy238 28 KIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLH 107 (218)
Q Consensus 28 ~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 107 (218)
-+..+..++.+++ +|+++.. + +...+.+++|+|-.... . ...++.-=+.+|.-.|
T Consensus 104 ~y~nky~v~Armh--GilrL~N---D---n~~~yGvIlE~Cy~~~i-------------~----~~N~i~agi~~L~~fH 158 (308)
T PF07387_consen 104 LYFNKYRVFARMH--GILRLKN---D---NNYKYGVILERCYKIKI-------------N----FSNFITAGIKDLMDFH 158 (308)
T ss_pred hhhhhhhHHHHhh--heeEeec---C---CCceeEEEEeeccCccc-------------c----hhHHHHHhHHHHHHhh
Confidence 3456677777776 5777752 2 23457799999832110 0 1111112245677889
Q ss_pred cCCCCcccCCCCCCcEEEecCCcEEEeecC
Q psy238 108 SCSPPIIHGNLTCDTIFIQHNGLVKIGCDT 137 (218)
Q Consensus 108 ~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg 137 (218)
+.+.+.+|+|..|+||+-|..|.+||.|-+
T Consensus 159 ~~~~~~lHGD~np~NiM~D~~G~lKlVDP~ 188 (308)
T PF07387_consen 159 SENQHCLHGDCNPDNIMCDKFGYLKLVDPV 188 (308)
T ss_pred ccCCCeecCCCChhheeecCCCCEEecChh
Confidence 754679999999999999999999999966
No 481
>KOG0576|consensus
Probab=96.70 E-value=0.00081 Score=59.62 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=74.8
Q ss_pred HHHHHHHHhhcCCCCc-ccceeeeeecCCCCCCeEEEEEeccCCC-CHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Q psy238 28 KIQQVFENLTQLEHPN-IVKFHRYWTDTHNDKPRVIFITEYMSSG-SLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSY 105 (218)
Q Consensus 28 ~~~~ei~~l~~l~hp~-iv~l~~~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 105 (218)
...-++++|.+++||| .+..++.+. ...+.+++++++.++ +......... -.+.......+.+.-+.++++
T Consensus 279 ~~rl~~eLLdK~n~P~~~v~~~~d~~----~E~~~~i~~~i~s~~rs~~~~~~~se---~~~~~~~~~~~~r~et~~l~~ 351 (829)
T KOG0576|consen 279 SRRLAIELLDKVNNPNPVVRYLEDYD----GEDYLWIPMRICSTGRSSALEMTVSE---IALEQYQFAYPLRKETRPLAE 351 (829)
T ss_pred hhHHHHHHHHHccCCCCcccccccCC----cccccchhhhhhcCCccccccCChhh---Hhhhhhhhhhhhhhhcccccc
Confidence 3445688899999999 555544432 234688999999765 2211111100 113333444556667889999
Q ss_pred hhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc-------ccCCCccccccccc
Q psy238 106 LHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT-------IENKKYLSATRQTY 155 (218)
Q Consensus 106 lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~-------~~~~~t~~y~aPE~ 155 (218)
+|+. .=+|+| ||+..+ +..+..+|+.... .+..++..++|||+
T Consensus 352 l~~~--~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev 401 (829)
T KOG0576|consen 352 LHSS--YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEV 401 (829)
T ss_pred cccc--cccCcc----cccccc-cccccccccCCcccCcccccccCCCCCCCCCchh
Confidence 9993 258888 777644 6778888886654 56788999999995
No 482
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.59 E-value=0.0015 Score=59.56 Aligned_cols=65 Identities=6% Similarity=-0.022 Sum_probs=45.8
Q ss_pred ccCCCCCC-cEEEecCCcEEEeecCcccc----------ccCCCccccccccc--CCCCch----------hhhhhhCCC
Q psy238 114 IHGNLTCD-TIFIQHNGLVKIGCDTYTHT----------IENKKYLSATRQTY--GRPISG----------QYEIVTKTN 170 (218)
Q Consensus 114 iH~dlkp~-NiLl~~~~~~ki~dfg~~~~----------~~~~~t~~y~aPE~--~~~~~~----------~~ei~tg~~ 170 (218)
.+++..|. |+++..++...+.|||.+.. ....||+.|+|||+ +..++. +||+++|..
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~ 578 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIP 578 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 45666666 56666667777888886544 23478999999996 333332 799999999
Q ss_pred CCCcchhh
Q psy238 171 NVTEKKKE 178 (218)
Q Consensus 171 p~~~~~~e 178 (218)
||.+....
T Consensus 579 pf~~~~~~ 586 (669)
T cd05610 579 PFNDETPQ 586 (669)
T ss_pred CCCCCCHH
Confidence 99865443
No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.53 E-value=0.024 Score=48.46 Aligned_cols=28 Identities=11% Similarity=0.438 Sum_probs=22.6
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~ 139 (218)
..++|+||.|.|||+..++ .+++|.-++
T Consensus 230 ~~L~HGDl~~g~i~~~~~~-~~~id~ef~ 257 (418)
T PLN02756 230 QALVHGDLHTGSVMVTPDS-TQVIDPEFA 257 (418)
T ss_pred cceeecCCCCCcEEEcCCC-ceEecchhh
Confidence 4589999999999998876 777775543
No 484
>KOG1236|consensus
Probab=96.11 E-value=0.042 Score=46.87 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=44.5
Q ss_pred EEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEec
Q psy238 62 IFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQH 127 (218)
Q Consensus 62 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~ 127 (218)
.++=+|..|.++..++... ..|+.....++.-.+.|+..|--. .+++|.|++|.||++--
T Consensus 321 vl~E~~~~Gl~v~~~v~~~-----~~pe~l~kkva~lg~~AllkMl~v-DNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKWK-----SQPEALVKKVAKLGVNALLKMLIV-DNFVHADLHPGNVLIRF 380 (565)
T ss_pred eeeeeccccccHHhhhhcc-----cChHHHHHHHHHHHHHHHHHHHHh-hcceecccCCCcEEEEe
Confidence 4555677788888888653 356667777777777777776553 45999999999999953
No 485
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=96.08 E-value=0.053 Score=41.83 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhhcC---CCCcc--cceeeeeecCC--------------CCCCeEEEEEeccCCCCHHHHHHhhcccCC
Q psy238 25 QEEKIQQVFENLTQL---EHPNI--VKFHRYWTDTH--------------NDKPRVIFITEYMSSGSLKQFLKRTKRNVK 85 (218)
Q Consensus 25 ~~~~~~~ei~~l~~l---~hp~i--v~l~~~~~~~~--------------~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~ 85 (218)
....|..|-+...++ .+.++ |+++||..-.. .......||.||++...
T Consensus 97 y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------- 163 (207)
T PF13095_consen 97 YADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------- 163 (207)
T ss_pred hcChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------
Confidence 334566777766665 45566 88999874431 12234568999886533
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcc
Q psy238 86 KLPLSAWKRWCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYT 139 (218)
Q Consensus 86 ~~~~~~~~~~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~ 139 (218)
.+... -+.+|++-|..+|. .||+-+|+++.|.. .-+|+|||.+
T Consensus 164 ~~~~~----~~~~~~~dl~~~~k--~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 164 PLQIR----DIPQMLRDLKILHK--LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ccchh----HHHHHHHHHHHHHH--CCeeeccCcccccc-----CCEEEecccC
Confidence 12222 34567777888999 55999999999987 3578899864
No 486
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=95.78 E-value=0.029 Score=45.38 Aligned_cols=47 Identities=13% Similarity=0.052 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhcCCCCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 95 WCSQILSALSYLHSCSPPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 95 ~~~qi~~~l~~lH~~~~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+..+-.++.-++..-.-++|+|+.|.|+|.++.+.++|+||-.+..
T Consensus 137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~ 183 (269)
T COG0510 137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence 33444444444444101389999999999999999999999987765
No 487
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.63 E-value=0.09 Score=44.26 Aligned_cols=29 Identities=21% Similarity=0.505 Sum_probs=23.8
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTH 140 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~ 140 (218)
..++|+||.|.||++++++ ++++|+.++.
T Consensus 192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~ 220 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAF 220 (370)
T ss_pred ceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence 4589999999999997765 7799987554
No 488
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=95.63 E-value=0.023 Score=44.57 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=26.8
Q ss_pred CCcccCCCCCCcEEEec-CCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQH-NGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~-~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.|.|||++. ++.+.++||..+..
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 35899999999999998 57899999987664
No 489
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=95.59 E-value=0.026 Score=46.36 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=27.9
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 5699999999999999988788999998765
No 490
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=95.49 E-value=0.016 Score=49.77 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=21.0
Q ss_pred CcccCCCCCCcEEEecCC-----cEEEeecCcc
Q psy238 112 PIIHGNLTCDTIFIQHNG-----LVKIGCDTYT 139 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~~~-----~~ki~dfg~~ 139 (218)
-++|+||.+.|||.+.+. ...|+||-.+
T Consensus 269 VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~v 301 (414)
T PF07914_consen 269 VLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCV 301 (414)
T ss_pred ceecCCccHHheeeecCCchhHHHHHHHHHHHh
Confidence 478999999999998743 3457776543
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.46 E-value=0.1 Score=42.57 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=18.6
Q ss_pred CcccCCCCCCcEEEecCCcEEEeecC
Q psy238 112 PIIHGNLTCDTIFIQHNGLVKIGCDT 137 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~~~~~ki~dfg 137 (218)
-++|+||-+.|++++.+|.+.|.|-.
T Consensus 189 sLlHGDLW~GN~~~~~~g~p~l~DPa 214 (288)
T PF03881_consen 189 SLLHGDLWSGNVGFDADGEPVLFDPA 214 (288)
T ss_dssp EEE-SS-SGGGEEEETTE-EEE-S--
T ss_pred eeeEcCccccceeecCCCCceeeccc
Confidence 48999999999999999989999854
No 492
>KOG1035|consensus
Probab=95.37 E-value=0.033 Score=52.90 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEeccCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Q psy238 26 EEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYMSSGSLKQFLKRTKRNVKKLPLSAWKRWCSQILSALSY 105 (218)
Q Consensus 26 ~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 105 (218)
......|+..+..+.|+|++.++.+....-..+-.+.+..++++.-++...+..-. ..+..+++.+..+++.||.|
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~----~i~~~~~r~~~~~~~~GL~~ 301 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG----SIPLETLRILHQKLLEGLAY 301 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc----ccCHHHHHHHHHHHhhhHHH
Confidence 34445567778888999999998886654321112334557788888888888653 48999999999999999999
Q ss_pred hhcCCCCcccCCCCCC---cEEEecCCcEEEe--ecCcccc
Q psy238 106 LHSCSPPIIHGNLTCD---TIFIQHNGLVKIG--CDTYTHT 141 (218)
Q Consensus 106 lH~~~~~iiH~dlkp~---NiLl~~~~~~ki~--dfg~~~~ 141 (218)
+|+ ....|.-|..+ +.-++.++.+.+. ||+.+..
T Consensus 302 ~h~--~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~ 340 (1351)
T KOG1035|consen 302 LHS--LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKP 340 (1351)
T ss_pred HHH--hccceeEEecccccccccCccceeecchhhhccccc
Confidence 999 43555544444 3333445555555 7776654
No 493
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.36 E-value=0.045 Score=44.79 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=25.8
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.+.|||++. +.+.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 46899999999999987 6688999997654
No 494
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.14 E-value=0.021 Score=43.46 Aligned_cols=29 Identities=10% Similarity=0.194 Sum_probs=25.3
Q ss_pred CcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 112 PIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
..+|+|+.|.||++.+++ ++++||+.+..
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 368999999999998877 88999998765
No 495
>PTZ00384 choline kinase; Provisional
Probab=94.66 E-value=0.22 Score=42.44 Aligned_cols=29 Identities=10% Similarity=-0.055 Sum_probs=24.1
Q ss_pred CcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 112 PIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 112 ~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
..+|.|+.+.|||.+. ..+.++||-.|..
T Consensus 228 VfCHNDL~~gNIL~~~-~~l~lID~EYA~~ 256 (383)
T PTZ00384 228 LFCHNDLFFTNILDFN-QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeccCCcccEEecC-CCEEEEEeccccC
Confidence 4689999999999754 5699999988765
No 496
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=94.30 E-value=0.057 Score=41.71 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=21.4
Q ss_pred CcccCCCCCCcEEE-ecCCcEEEeecCcccc
Q psy238 112 PIIHGNLTCDTIFI-QHNGLVKIGCDTYTHT 141 (218)
Q Consensus 112 ~iiH~dlkp~NiLl-~~~~~~ki~dfg~~~~ 141 (218)
.+.|.|+.|.|||+ ..++.++++||..+..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 47899999999999 8889999999988765
No 497
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.26 E-value=0.082 Score=43.46 Aligned_cols=31 Identities=10% Similarity=0.016 Sum_probs=28.0
Q ss_pred CCcccCCCCCCcEEEecCCcEEEeecCcccc
Q psy238 111 PPIIHGNLTCDTIFIQHNGLVKIGCDTYTHT 141 (218)
Q Consensus 111 ~~iiH~dlkp~NiLl~~~~~~ki~dfg~~~~ 141 (218)
.+++|+|+.++|+|++.++.+.++||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 4699999999999999999999999987765
No 498
>PHA03111 Ser/Thr kinase; Provisional
Probab=94.20 E-value=0.1 Score=43.33 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHhhc--CCCCcccCCCCCCcEEEecCC------------------cEEEeecCcccc
Q psy238 89 LSAWKRWCSQILSALSYLHS--CSPPIIHGNLTCDTIFIQHNG------------------LVKIGCDTYTHT 141 (218)
Q Consensus 89 ~~~~~~~~~qi~~~l~~lH~--~~~~iiH~dlkp~NiLl~~~~------------------~~ki~dfg~~~~ 141 (218)
..-++.++.||+.-.-.+.. |....+|-||||+|||+.+.. .++|.||.+|+.
T Consensus 278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv 350 (444)
T PHA03111 278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQV 350 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHH
Confidence 45667788888655434422 125699999999999995432 345667777765
No 499
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=94.09 E-value=0.093 Score=43.70 Aligned_cols=29 Identities=21% Similarity=0.166 Sum_probs=26.1
Q ss_pred cccCCCCCCcEEEecCCc-EEEeecCcccc
Q psy238 113 IIHGNLTCDTIFIQHNGL-VKIGCDTYTHT 141 (218)
Q Consensus 113 iiH~dlkp~NiLl~~~~~-~ki~dfg~~~~ 141 (218)
+||+|+.|.|||++.+.. +-++||+.+..
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 899999999999998874 88999998765
No 500
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=94.04 E-value=0.13 Score=41.18 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=39.3
Q ss_pred CCCCcEEEEEEeecccccccHHHHHHHHHHHHHhhcCCCCcccceeeeeecCCCCCCeEEEEEecc-CCCCHHHHH
Q psy238 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRVIFITEYM-SSGSLKQFL 77 (218)
Q Consensus 3 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~~ei~~l~~l~hp~iv~l~~~~~~~~~~~~~~~lv~e~~-~~~sL~~~l 77 (218)
+.+|.++++|+........ .-......|...+-.+.|+++..-... -.|++|.+ ++.+|.++.
T Consensus 23 ~~dG~~avLKl~~p~~~~~------~E~~g~~~L~~w~G~GaVrll~~d~~~------~AlLLErl~~g~~L~~~~ 86 (253)
T PF04655_consen 23 RADGTPAVLKLAPPHAEAE------HEARGEAALRWWNGRGAVRLLAADPER------GALLLERLDPGRSLASLP 86 (253)
T ss_pred cCCCCeEEEEecCCcccch------hhhhHHhHhheeCCCCceeeecccccc------chhhhhhccCCCchhhcc
Confidence 5689999999887321100 011112447777888899998765332 47888988 555676554
Done!