BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2380
(733 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340789131|ref|YP_004754596.1| S-adenosyl-methyltransferase mraW [Collimonas fungivorans Ter331]
gi|340554398|gb|AEK63773.1| S-adenosyl-methyltransferase mraW [Collimonas fungivorans Ter331]
Length = 322
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/279 (53%), Positives = 205/279 (73%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +GIY+D TFG+GGHS KIL+ LG +GRLIA DKD ++++ +
Sbjct: 14 VLLDEAVSALAITGARADGIYVDGTFGRGGHSRKILQSLGPRGRLIAFDKDPQAIATAAE 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H+ F + L++ I+++DG+L DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 74 IADPRFEIVHDSFATMAQALQERGIQQVDGVLLDLGISSPQVDDASRGFSFRADGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA+ WLA A E I KV++DYGEERFA +IAK IV R++ PIT T+QL +I+
Sbjct: 134 MDTTRGMSAAAWLAVADEQTIGKVVRDYGEERFAVQIAKAIVAGRTVQPITGTRQLAQIV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++ ++ K+PATRTFQAIRI+INQEL+ L I L F+++ +GR+VVISFHSLEDR
Sbjct: 194 ANAVKTREKGKDPATRTFQAIRIFINQELEELEIVLDQAFRQMAQQGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
IVK F+ ++P DRRLPI L +P++K +AR KP
Sbjct: 254 IVKQFMASKARLPQPDRRLPIRAVDLPQPELKLVARVKP 292
>gi|237749177|ref|ZP_04579657.1| S-adenosyl-methyltransferase MraW [Oxalobacter formigenes OXCC13]
gi|229380539|gb|EEO30630.1| S-adenosyl-methyltransferase MraW [Oxalobacter formigenes OXCC13]
Length = 319
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/281 (57%), Positives = 206/281 (73%), Gaps = 1/281 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L IE +R+NGI+ID TFG+GGHS ILERLG +GRLIA DKD E+VS+ K
Sbjct: 9 VLLKEAVDALAIEGDRVNGIFIDGTFGRGGHSRLILERLGGEGRLIAFDKDPEAVSVAGK 68
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF I+H F +L +L++ I+ IDGIL DLGISS Q+ + RGFSF L+GPLDMR
Sbjct: 69 ITDPRFEIVHKSFADLGEVLEEKGIEMIDGILLDLGISSPQVEDAARGFSFRLEGPLDMR 128
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA TE I +VI YGEERFA +IAK IV R+I PI TKQL EI+
Sbjct: 129 MDSTRGLSAAEWLAVETEEKIAEVIHQYGEERFAFQIAKAIVACRTIKPIDSTKQLAEIV 188
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++ ++ KNPATRTFQAIRI+IN+EL+ L I L+ ++ L + GR+ VISFHSLEDR
Sbjct: 189 AGAVKTFEKGKNPATRTFQAIRIFINRELEELEIGLQAAWQHLRLNGRMSVISFHSLEDR 248
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
IVK F++ K+ DRRLPI L +P+MK L + KP K
Sbjct: 249 IVKKFLSGKAKVDMPDRRLPIRAIDLPQPEMKLLGKQKPSK 289
>gi|152980341|ref|YP_001354713.1| S-adenosyl-methyltransferase MraW [Janthinobacterium sp. Marseille]
gi|263456176|sp|A6T2G6.1|RSMH_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|151280418|gb|ABR88828.1| S-adenosyl-methyltransferase [Janthinobacterium sp. Marseille]
Length = 322
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/279 (53%), Positives = 202/279 (72%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + ER NG+Y+D TFG+GGHS KIL++LG RL+A DKDT++++
Sbjct: 14 VLLDEAVDALALGGERANGVYVDGTFGRGGHSRKILQQLGSGARLLAFDKDTQAIANAAT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I H+ F L L IK++DG+L DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 74 IDDQRFEIAHDSFATLSEALAVRGIKQVDGVLLDLGISSPQVDDATRGFSFRADGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA TE I+KVI++YGEERFA +IAK IV R++ PI+ T+QL EI+
Sbjct: 134 MDTTRGMSAAEWLATETEQKIEKVIREYGEERFAFQIAKAIVARRAVEPISSTRQLAEIV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++++ ++ K+PATRTFQAIRI+INQEL+ L + L ++ L GR+VVISFHSLEDR
Sbjct: 194 ARTVKTREKGKDPATRTFQAIRIFINQELEELEVVLNEAYRYLAPHGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
IVK F+ +P DRRLPI L +P+MK L+R KP
Sbjct: 254 IVKQFMAGKANVPQPDRRLPIRAIDLPQPEMKLLSRVKP 292
>gi|134095979|ref|YP_001101054.1| S-adenosyl-methyltransferase MraW [Herminiimonas arsenicoxydans]
gi|263456141|sp|A4G8U6.1|RSMH_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|133739882|emb|CAL62933.1| S-adenosyl-dependent methyl transferase MraW [Herminiimonas
arsenicoxydans]
Length = 321
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/279 (53%), Positives = 204/279 (73%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L ++ ER NG+Y+D TFG+GGHS IL+RLG+ G L+A DKDT++++
Sbjct: 14 VLLEEAVDALALDGERANGMYVDGTFGRGGHSRLILQRLGENGCLLAFDKDTQAIANAAT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+I+H+ F L L + I +++G+L DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 74 IEDKRFAIVHDSFATLSTALAERGIAQVNGVLLDLGISSPQVDDAARGFSFRADGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRGISA++WLA TE I+KVI++YGEERFA +IAK IV R++ PI+ T+QL EI+
Sbjct: 134 MDTTRGISAAEWLATETEQKIEKVIREYGEERFAFQIAKAIVAGRAVQPISSTRQLAEIV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++++ ++ K+PATRTFQAIRI+INQEL+ L + L ++ L GR+VVISFHSLEDR
Sbjct: 194 ARAVKTREKGKDPATRTFQAIRIFINQELEELEVVLNEAYRHLAPHGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
IVK F+ +P DRRLPI L +P+MK +AR KP
Sbjct: 254 IVKQFMASKANVPQPDRRLPIRAVDLPQPEMKLIARIKP 292
>gi|409408883|ref|ZP_11257318.1| S-adenosyl-methionine-dependent methyltransferase MraW protein
[Herbaspirillum sp. GW103]
gi|386432205|gb|EIJ45033.1| S-adenosyl-methionine-dependent methyltransferase MraW protein
[Herbaspirillum sp. GW103]
Length = 327
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 196/279 (70%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L I ER NGIY+D TFG+GGHS IL RLG +GRLIA DKD +++ K
Sbjct: 14 VLLEEAVDALAISGERANGIYLDGTFGRGGHSRAILSRLGPQGRLIAFDKDPLAIATAQK 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F +D L I ++DG+L DLGISS Q+++ RGFSF LDGPLDMR
Sbjct: 74 IDDARFEIVHDSFATMDEALAARGIAQVDGVLMDLGISSPQVDDAARGFSFRLDGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA A E I KVI+DYGEERFA +IAK+IV R+I PI+ T+QL ++
Sbjct: 134 MDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAIEPISSTRQLAALV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++++ ++ K+PATRTFQA+RI++NQEL+ L + L F ++ GR+VVISFHSLEDR
Sbjct: 194 AQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFAQMAQHGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
IVK F+ P DRRLPI L + + L R P
Sbjct: 254 IVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMP 292
>gi|398837076|ref|ZP_10594388.1| S-adenosyl-methyltransferase MraW [Herbaspirillum sp. YR522]
gi|398209370|gb|EJM96045.1| S-adenosyl-methyltransferase MraW [Herbaspirillum sp. YR522]
Length = 321
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 196/279 (70%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L IE ER +GIY+D TFG+GGHS IL +LG +GRLIA DKD +++ +
Sbjct: 14 VLLEEAVDALAIEGERADGIYLDGTFGRGGHSRAILAKLGPRGRLIAFDKDPLAIATARQ 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H+ F LD L I ++DGIL DLGISS Q+++ RGFSF LDGPLDMR
Sbjct: 74 IADPRFEIVHDSFATLDQALAVRGIAQVDGILMDLGISSPQVDDAARGFSFRLDGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA A I KVI+DYGEERFA +IAK IV R++ PI+ T+QL ++
Sbjct: 134 MDTTRGVSAAEWLATADVEKIAKVIRDYGEERFAFQIAKAIVARRAVEPISGTRQLAALV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+ ++ ++ K+PATRTFQA+RI++NQEL+ L + L F+++ + GR+VVISFHSLEDR
Sbjct: 194 AEVVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFEQMALHGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
IVK F+ P DRRLPI L +P + L R P
Sbjct: 254 IVKQFMASKANAPQPDRRLPIRAVDLPQPPARLLGRTMP 292
>gi|329907257|ref|ZP_08274578.1| S-adenosyl-methyltransferase MraW [Oxalobacteraceae bacterium
IMCC9480]
gi|327547063|gb|EGF31946.1| S-adenosyl-methyltransferase MraW [Oxalobacteraceae bacterium
IMCC9480]
Length = 316
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/282 (51%), Positives = 200/282 (70%), Gaps = 1/282 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L ++ R +GIY+D TFG+GGHS +IL LG GRLIA DKD ++++ +
Sbjct: 10 VLLEEAVEALALQGARTDGIYLDGTFGRGGHSRRILSALGAGGRLIAFDKDPQAIASAGE 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H+ F LD+ L + +DG+L DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 70 IADPRFDIVHDSFATLDLALSARGVGLVDGVLLDLGISSPQVDDAARGFSFRADGPLDMR 129
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA TE NI+KVI++YGEERFA +IAK I R+I PI+ T+QL +I+
Sbjct: 130 MDTTRGLSAAEWLATETEQNIEKVIRNYGEERFAFQIAKAIAASRTIEPISSTRQLAQIV 189
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++++ ++ K+PATRTFQAIRIYINQEL+ L I L+ + +L GR+VVISFHSLEDR
Sbjct: 190 ARTVKTREKGKDPATRTFQAIRIYINQELEELEIGLQQAYARLAPHGRLVVISFHSLEDR 249
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKKK 507
IVK F+ + DRRLPI L +P+M +++ KP +
Sbjct: 250 IVKRFMASKAHVEQPDRRLPIRAVDLPQPEMILISKAKPSTE 291
>gi|300309670|ref|YP_003773762.1| S-adenosyl-methionine-dependent methyltransferase MraW protein
[Herbaspirillum seropedicae SmR1]
gi|300072455|gb|ADJ61854.1| S-adenosyl-methionine-dependent methyltransferase MraW protein
[Herbaspirillum seropedicae SmR1]
Length = 324
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 198/279 (70%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L IE ER NG+Y+D TFG+GGHS IL RLG +GRLIA DKD +++ K
Sbjct: 14 VLLEEAVDALAIEGERANGVYLDGTFGRGGHSRAILSRLGPQGRLIAFDKDPLAIATAQK 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H+ F +D L + I ++DG+L DLGISS Q+++ RGFSF LDGPLDMR
Sbjct: 74 IADPRFEIVHDSFATMDQALAERGIARVDGVLMDLGISSPQVDDAARGFSFRLDGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA A E I KVI+DYGEERFA +IAK+IV R++ PI+ T+QL ++
Sbjct: 134 MDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAVEPISSTRQLAALV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++++ ++ K+PATRTFQA+RI++NQEL+ L + L+ F ++ GR+VVISFHSLEDR
Sbjct: 194 AQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLEKAFAQMAQHGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
IVK F+ P DRRLPI L + + L R P
Sbjct: 254 IVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMP 292
>gi|237747024|ref|ZP_04577504.1| S-adenosyl-methyltransferase MraW [Oxalobacter formigenes HOxBLS]
gi|229378375|gb|EEO28466.1| S-adenosyl-methyltransferase MraW [Oxalobacter formigenes HOxBLS]
Length = 321
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/289 (54%), Positives = 208/289 (71%), Gaps = 5/289 (1%)
Query: 221 LRIMGFL----FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDK 276
+ + GF+ LNEA++ L+I +R +G+Y+D TFG+GGHS ILERLG+KGRL+A DK
Sbjct: 1 MEVPGFVHDSVLLNEAVDALDISGKRADGVYLDGTFGRGGHSRLILERLGEKGRLVAFDK 60
Query: 277 DTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFS 336
D E+V + +I D RF I+H F L+ +L++ IK IDGIL DLG+SS Q+ + RGFS
Sbjct: 61 DPEAVRVAKEIGDPRFEIVHGTFAALEEVLEERKIKAIDGILLDLGVSSPQVEDAKRGFS 120
Query: 337 FLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPI 396
F LDGPLDMRMD TRG+SA +WLA TE I +VI YGEERFA +IAKEIV R+I PI
Sbjct: 121 FRLDGPLDMRMDSTRGMSAREWLAVETEKKIAEVIYQYGEERFAFQIAKEIVAGRAIQPI 180
Query: 397 TRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIV 456
TKQL +I+ ++++ ++ KNPATRTFQAIRIY+N+EL+ L I L+ +++L ++GR+
Sbjct: 181 DSTKQLAQIVARAVKTFEKGKNPATRTFQAIRIYVNRELEELEIGLEKAWQRLGLEGRMS 240
Query: 457 VISFHSLEDRIVKNFINFNTKIPHIDRRLPIY-NYLFEPKMKFLARCKP 504
VISFHSLEDRIVK F + DRRLPI + L P+MK L + KP
Sbjct: 241 VISFHSLEDRIVKRFFAGKATVKMPDRRLPIRASELPRPEMKLLGKIKP 289
>gi|415940458|ref|ZP_11555652.1| S-adenosyl-dependent methyl transferase, partial [Herbaspirillum
frisingense GSF30]
gi|407759170|gb|EKF68902.1| S-adenosyl-dependent methyl transferase, partial [Herbaspirillum
frisingense GSF30]
Length = 273
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/260 (55%), Positives = 192/260 (73%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L IE ER NG+Y+D TFG+GGHS IL RLG +GRLIA DKD +++ K
Sbjct: 14 VLLEEAVDALAIEGERANGVYLDGTFGRGGHSRAILSRLGPQGRLIAFDKDPLAIATAQK 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F +D L + I ++DG+L DLGISS Q+++ RGFSF LDGPLDMR
Sbjct: 74 IDDARFEIVHDSFATMDQALAERGIAQVDGVLMDLGISSPQVDDAARGFSFRLDGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA+ WLA A E I KVI+DYGEERFA +IAK+IV R+I PI+ T+QL ++
Sbjct: 134 MDTTRGMSAADWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAIQPISSTRQLAALV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++++ ++ K+PATRTFQA+RI++NQEL+ L + L+ F+++ GR+VVISFHSLEDR
Sbjct: 194 AQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLEKAFRQMAQHGRLVVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLP 486
IVK F+ P DRRLP
Sbjct: 254 IVKQFMASKAHAPQPDRRLP 273
>gi|427402711|ref|ZP_18893708.1| ribosomal RNA small subunit methyltransferase H [Massilia timonae
CCUG 45783]
gi|425718517|gb|EKU81464.1| ribosomal RNA small subunit methyltransferase H [Massilia timonae
CCUG 45783]
Length = 319
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 199/279 (71%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ LN+ R +GIYID TFG+GGHS +L RLG +GRLIA DKD ++++ +
Sbjct: 15 VLLDEAVDALNLAGARADGIYIDGTFGRGGHSRLLLSRLGPQGRLIAFDKDPQAIATASH 74
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+I+H+ F + L I ++DGIL DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 75 IDDPRFAIVHDSFATMHDALAARGIPRVDGILLDLGISSPQVDDASRGFSFRNDGPLDMR 134
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++W+A+A + ++KVI+DYGEER+A +IAK IV R++ PI+ T+QL I+
Sbjct: 135 MDTTRGMSAAEWIASAEQLQLEKVIRDYGEERYAFQIAKAIVARRAVEPISGTRQLAAIV 194
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++G ++ K+PATRTFQAIRI+IN+EL++L L + L R+ VISFHSLEDR
Sbjct: 195 ASAVKGREKGKDPATRTFQAIRIFINKELEDLEAGLTAAYGMLAPGARMSVISFHSLEDR 254
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
+VK F+ K+ DRRLPI L +P+M+ + + KP
Sbjct: 255 MVKQFLASKAKVEQPDRRLPIRAVDLPQPEMRLIDKIKP 293
>gi|399019822|ref|ZP_10721967.1| S-adenosyl-methyltransferase MraW [Herbaspirillum sp. CF444]
gi|398097249|gb|EJL87560.1| S-adenosyl-methyltransferase MraW [Herbaspirillum sp. CF444]
Length = 322
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/281 (52%), Positives = 202/281 (71%), Gaps = 3/281 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L IE +R +G+Y+D TFG+GGHS KILERL +GRLIA DKD +++
Sbjct: 14 VLLDEAVDALVIEGDRADGVYLDGTFGRGGHSRKILERLSARGRLIAFDKDPLAIATAQT 73
Query: 287 ITDSRFSIIHNCFTELD--IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
I D RF+I+H+ F LD + + + ++DG+L DLGISS Q+++ RGFSF DGPLD
Sbjct: 74 IADPRFAIVHDSFATLDQALAVHGHGAMRVDGVLMDLGISSPQVDDAARGFSFRFDGPLD 133
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++WLA A E I KVI+DYGEERFA +IAK IV R++ PI+ T+QL
Sbjct: 134 MRMDTTRGVSAAEWLATADEQTIAKVIRDYGEERFALQIAKTIVARRAVEPISTTRQLAA 193
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ ++++ ++ K+PATRTFQAIRI+INQEL+ L I L+ F+++ GR+VVISFHSLE
Sbjct: 194 LVAQAVKTREKGKDPATRTFQAIRIFINQELEELEIGLEKAFRQMAQYGRLVVISFHSLE 253
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
DRIVK F+ +P DRRLPI L +P + +R KP
Sbjct: 254 DRIVKQFMASKAHVPQPDRRLPIRAVDLPQPLARLHSRVKP 294
>gi|445495020|ref|ZP_21462064.1| ribosomal RNA small subunit methyltransferase H [Janthinobacterium
sp. HH01]
gi|444791181|gb|ELX12728.1| ribosomal RNA small subunit methyltransferase H [Janthinobacterium
sp. HH01]
Length = 325
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 197/279 (70%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L ++ R +G+Y+D TFG+GGHS IL +LG K RLIA DKD ++++ +
Sbjct: 14 VLLDEAVDALALDGARADGVYVDGTFGRGGHSRLILSKLGAKARLIAFDKDLQAIATAEQ 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF+I+H+ F + L + + + DGIL DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 74 ITDPRFTIVHDSFATMHAALAERGVAQADGILLDLGISSPQVDDAARGFSFRNDGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG+SA++WLA TE ++KVI++YGEERFA +IAK IV R++ PI+ T+QL I+
Sbjct: 134 MDTTRGMSAAEWLATETEQTLEKVIKEYGEERFAFQIAKAIVARRAVEPISTTRQLAGIV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++ ++ K+PATRTFQAIRI+IN+EL++L I L + L G I +ISFHSLEDR
Sbjct: 194 AGAVKTREKGKDPATRTFQAIRIFINKELEDLEIGLTQAWNSLAPGGIIAIISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
+VK F + DRRLPI L +P++K LA+ KP
Sbjct: 254 MVKRFFASKANVEQPDRRLPIRAVDLPQPELKLLAKFKP 292
>gi|395760930|ref|ZP_10441599.1| 16S rRNA m(4)C1402 methyltransferase [Janthinobacterium lividum
PAMC 25724]
Length = 325
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 195/279 (69%), Gaps = 1/279 (0%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L++ ER +GIY+D TFG+GGHS IL RL RL+ DKD ++++ +
Sbjct: 14 VLLDEAVDALDLTGERAHGIYVDGTFGRGGHSRLILSRLAPDARLVGFDKDLQAIATAEQ 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+I+H+ F + L ++++DGIL DLGISS Q+++ RGFSF DGPLDMR
Sbjct: 74 IGDPRFAIVHDSFATMTASLAARGVQQVDGILLDLGISSPQVDDAARGFSFRNDGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRGISA++WLA TE N++KVI+DYGEERFA +IAK IV R++ PI+ T+QL I+
Sbjct: 134 MDTTRGISAAEWLAVETEQNLEKVIRDYGEERFAFQIAKAIVAGRAVQPISSTRQLASIV 193
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++ ++ K+PATRTFQAIRI+IN+EL++L I L + L R+ VISFHSLEDR
Sbjct: 194 AGAVKTREKGKDPATRTFQAIRIFINKELEDLEIGLNQAYACLAPGARMAVISFHSLEDR 253
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
+VK F + DRRLPI L +P+MK + + KP
Sbjct: 254 MVKRFFASKANVEQPDRRLPIRAVDLPQPEMKLILKMKP 292
>gi|334129353|ref|ZP_08503158.1| S-adenosyl-dependent methyl transferase MraW [Methyloversatilis
universalis FAM5]
gi|333445579|gb|EGK73520.1| S-adenosyl-dependent methyl transferase MraW [Methyloversatilis
universalis FAM5]
Length = 304
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 186/278 (66%), Gaps = 4/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L + R G+Y+D TFG+GGHS +LERLG GRLIA+D+D +++ G
Sbjct: 6 VLLTEALDALAV---RPEGVYVDGTFGRGGHSRALLERLGPNGRLIALDRDPTAIAAGQS 62
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF+++H F E+ +L++ + +DG+L D+G+SS Q++ RG SF D PLDMR
Sbjct: 63 ITDPRFTLVHARFAEMGAVLEQLGVHDVDGVLLDIGVSSPQLDEAARGMSFRQDAPLDMR 122
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG + ++WLA A E +I++VI+DYGEERFA IAK IV RS P+ T QL I+
Sbjct: 123 MDTSRGETVAQWLARAEEAHIREVIRDYGEERFASAIAKAIVAARSERPVDSTTQLAAIV 182
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
++R + ++PATR+FQA+RI+INQEL+ LS+ L L GR+ VISFHSLEDR
Sbjct: 183 ASAVRTREAGQHPATRSFQALRIFINQELEELSLVLPQALAALKPGGRLAVISFHSLEDR 242
Query: 467 IVKNFINFNTKIPHIDRRLPI-YNYLFEPKMKFLARCK 503
+VK F+ P R LP+ + L +PKMK + R +
Sbjct: 243 MVKRFMADQASPPQPPRNLPLRADQLPQPKMKLIGRVR 280
>gi|83748758|ref|ZP_00945773.1| S-adenosyl-methyltransferase mraW [Ralstonia solanacearum UW551]
gi|207744409|ref|YP_002260801.1| s-adenosyl-methyltransferase mraw protein [Ralstonia solanacearum
IPO1609]
gi|386332325|ref|YP_006028494.1| s-adenosyl-methyltransferase mraw protein [Ralstonia solanacearum
Po82]
gi|421895507|ref|ZP_16325908.1| s-adenosyl-methyltransferase mraw protein [Ralstonia solanacearum
MolK2]
gi|83724579|gb|EAP71742.1| S-adenosyl-methyltransferase mraW [Ralstonia solanacearum UW551]
gi|206586672|emb|CAQ17258.1| s-adenosyl-methyltransferase mraw protein [Ralstonia solanacearum
MolK2]
gi|206595814|emb|CAQ62741.1| s-adenosyl-methyltransferase mraw protein [Ralstonia solanacearum
IPO1609]
gi|334194773|gb|AEG67958.1| s-adenosyl-methyltransferase mraw protein [Ralstonia solanacearum
Po82]
Length = 319
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 189/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS ILERLG GRLIA DKD +++ + D+RF+I H+ F
Sbjct: 26 RDDGIYIDGTFGRGGHSRLILERLGPGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAH 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 LDAALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A E +I +VI+DYGEERFA +IAK IV RS + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADERDIARVIRDYGEERFAVQIAKAIVARRSESGTRGPLDRTSELAALVAQAVKTREKGQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI++NQEL +L LK F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHVNQELADLETGLKAAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSAAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|309783013|ref|ZP_07677732.1| S-adenosyl-methyltransferase MraW [Ralstonia sp. 5_7_47FAA]
gi|404397177|ref|ZP_10988970.1| ribosomal RNA small subunit methyltransferase H [Ralstonia sp.
5_2_56FAA]
gi|308918121|gb|EFP63799.1| S-adenosyl-methyltransferase MraW [Ralstonia sp. 5_7_47FAA]
gi|348610636|gb|EGY60322.1| ribosomal RNA small subunit methyltransferase H [Ralstonia sp.
5_2_56FAA]
Length = 319
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/290 (47%), Positives = 197/290 (67%), Gaps = 14/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +GIYID TFG+GGHS +ILERLG GRL+A DKD +++
Sbjct: 14 VLLEEAVDALIW---RDDGIYIDGTFGRGGHSRRILERLGPGGRLVAFDKDPAAITEAGT 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RF+I H+ F ++ L I+++ G+L DLGISS QI+ RGFSF +DGPLDMR
Sbjct: 71 VEDARFAIEHDSFAQMAQCLDARGIERVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV R + P+ RT +L
Sbjct: 131 MDTTRGITAAQWLAEADERDIARVIRDYGEERFAVQIAKAIVARRGQSGDRGPLDRTSEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ ++++ ++ ++PATRTFQA+RI++NQEL +L LK F++L GR+VVISFHS
Sbjct: 191 AALVAQAVKTREKGQDPATRTFQALRIHVNQELADLETGLKAAFERLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINF-----NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P + RR P+ + L P+++ L R KP +
Sbjct: 251 LEDRIVKRFMQALARPEQSAAPEL-RRAPLRAHELPTPQLRLLGRVKPSE 299
>gi|300702954|ref|YP_003744556.1| s-adenosyl-dependent methyl transferase [Ralstonia solanacearum
CFBP2957]
gi|299070617|emb|CBJ41912.1| S-adenosyl-dependent methyl transferase [Ralstonia solanacearum
CFBP2957]
Length = 319
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 189/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS +LERLG GRLIA DKD +++ + D+RF+I H+ F
Sbjct: 26 RDDGIYIDGTFGRGGHSRLLLERLGPGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAH 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 LDAALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A E +I +VI+DYGEERFA +IAK IV RS + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADERDIARVIRDYGEERFAVQIAKAIVARRSESGTRGPLDRTSELAALVAQAVKTREKGQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI++NQEL +L LK F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHVNQELADLETGLKAAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSAAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|421890626|ref|ZP_16321481.1| S-adenosyl-dependent methyl transferase [Ralstonia solanacearum
K60-1]
gi|378963993|emb|CCF98229.1| S-adenosyl-dependent methyl transferase [Ralstonia solanacearum
K60-1]
Length = 319
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 189/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS +LERLG GRLIA DKD +++ + D+RF+I H+ F
Sbjct: 26 RDDGIYIDGTFGRGGHSRLLLERLGPGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAH 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 LDAALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A E +I +VI+DYGEERFA +IAK IV RS + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADERDIARVIRDYGEERFAVQIAKAIVARRSESGTRGPLDRTSELAALVAQAVKTREKAQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI++NQEL +L L+ F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHVNQELADLETGLRAAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSSAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|241664315|ref|YP_002982675.1| S-adenosyl-methyltransferase MraW [Ralstonia pickettii 12D]
gi|262825232|sp|C6BEJ1.1|RSMH_RALP1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|240866342|gb|ACS64003.1| S-adenosyl-methyltransferase MraW [Ralstonia pickettii 12D]
Length = 319
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/290 (47%), Positives = 197/290 (67%), Gaps = 14/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIYID TFG+GGHS +ILERLG GRL+A DKD +++
Sbjct: 14 VLLDEAVDALIW---RDDGIYIDGTFGRGGHSRRILERLGPGGRLVAFDKDPAAITEAGT 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RF+I H+ F ++ L I+++ G+L DLGISS QI+ RGFSF +DGPLDMR
Sbjct: 71 VEDARFAIEHDSFAQMAQCLDARGIERVAGVLLDLGISSPQIDEGERGFSFRMDGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV R + P+ RT +L
Sbjct: 131 MDTTRGITAAQWLAEADERDIARVIRDYGEERFAVQIAKAIVARRGQSGDRGPLDRTSEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ ++++ ++ ++PATRTFQA+RI++NQEL +L LK F +L GR+VVISFHS
Sbjct: 191 AALVAQAVKTREKGQDPATRTFQALRIHVNQELADLETGLKAAFDRLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINF-----NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P + RR P+ + L P+++ L R KP +
Sbjct: 251 LEDRIVKRFMQALARPEQSAAPEL-RRAPLRAHELPAPQLRLLGRVKPSE 299
>gi|187930165|ref|YP_001900652.1| S-adenosyl-methyltransferase MraW [Ralstonia pickettii 12J]
gi|262825235|sp|B2UCY5.1|RSMH_RALPJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|187727055|gb|ACD28220.1| S-adenosyl-methyltransferase MraW [Ralstonia pickettii 12J]
Length = 319
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/290 (47%), Positives = 197/290 (67%), Gaps = 14/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIYID TFG+GGHS +ILERLG GRL+A DKD +++
Sbjct: 14 VLLDEAVDALIW---RDDGIYIDGTFGRGGHSRRILERLGPGGRLVAFDKDPAAITEAGT 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RF+I H+ F ++ L ++++ G+L DLGISS QI+ RGFSF +DGPLDMR
Sbjct: 71 VEDARFAIEHDSFAQMARCLDARGVEQVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV R + P+ RT +L
Sbjct: 131 MDTTRGITAAQWLAEADERDIARVIRDYGEERFAVQIAKAIVARRGQSGDRGPLDRTSEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ ++++ ++ ++PATRTFQA+RI++NQEL +L LK F +L GR+VVISFHS
Sbjct: 191 AALVAQAVKTREKGQDPATRTFQALRIHVNQELADLETGLKAAFDRLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINF-----NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P + RR P+ + L P+++ L R KP +
Sbjct: 251 LEDRIVKRFMQALARPEQSAAPEL-RRAPLRAHELPAPQLRLLGRVKPSE 299
>gi|209519087|ref|ZP_03267893.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. H160]
gi|209500459|gb|EEA00509.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. H160]
Length = 317
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 187/281 (66%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L R +G Y+D TFG+GGHS +LERLG+ GRLIA DKD +++ K
Sbjct: 14 VLLNEAVDALVT---RTDGTYVDGTFGRGGHSRLVLERLGEAGRLIAFDKDPLAIATAQK 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I DSRF+I+H F L + + + ++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 71 IADSRFAIVHESFASLRAAMAERGVGRVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHVNQELAELQVVLEAALSLLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 251 LEDRIVKRFMQAHASTPAVDRRLPIRAVDLPSPPLKIIGRV 291
>gi|394990732|ref|ZP_10383556.1| hypothetical protein SCD_03158 [Sulfuricella denitrificans skB26]
gi|393790060|dbj|GAB73195.1| hypothetical protein SCD_03158 [Sulfuricella denitrificans skB26]
Length = 312
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/277 (49%), Positives = 193/277 (69%), Gaps = 4/277 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ LNI R +G+Y+D TFG+GGHS ILE+LG++GRLIA+D+D V K
Sbjct: 10 VLLDEAVDGLNI---RPDGVYVDCTFGRGGHSRLILEKLGEQGRLIALDRDLAGVEEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF I+H+ F+ L +LK+ + +DG+L DLGISS QI+ +RGFSF DGPLDMR
Sbjct: 67 ITDPRFQIVHSSFSRLRDVLKELGVAHVDGVLLDLGISSPQIDEAVRGFSFRFDGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD + G +A++WLA+ TE + +VI++YGEER+AK+IA+ IV RS P+ T+QL +I+
Sbjct: 127 MDTSHGQTAAEWLADVTEQQLGEVIKNYGEERYAKQIARAIVAARSGEPVVTTRQLSQIV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
K+ + + +++PATRTFQAIRIY+NQEL+ LS+ L L GR+VVISFHSLEDR
Sbjct: 187 AKAFKSREPHQDPATRTFQAIRIYLNQELEELSLVLPQCVDVLAPFGRLVVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
+VK F+ + RLP+ L P ++ + +
Sbjct: 247 VVKRFMRDGAQPAVFPARLPLRAAELPAPHLRLVGKA 283
>gi|344172534|emb|CCA85178.1| S-adenosyl-dependent methyl transferase [Ralstonia syzygii R24]
Length = 319
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 188/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS ILERLG GRLIA DKD +++ + D+RF+I H+ F
Sbjct: 26 RDDGIYIDGTFGRGGHSRLILERLGPGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAH 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 LDAALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A +I +VI+DYGEERFA +IAK IV RS + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADARDIARVIRDYGEERFAVQIAKAIVARRSESGTRGPLDRTSELAALVAQAVKTREKGQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI++NQEL +L LK F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHVNQELADLETGLKAAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSAAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|300690333|ref|YP_003751328.1| S-adenosyl-dependent methyl transferase [Ralstonia solanacearum
PSI07]
gi|299077393|emb|CBJ50018.1| S-adenosyl-dependent methyl transferase [Ralstonia solanacearum
PSI07]
gi|344169143|emb|CCA81466.1| S-adenosyl-dependent methyl transferase [blood disease bacterium
R229]
Length = 319
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 188/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS ILERLG GRLIA DKD +++ + D+RF+I H+ F
Sbjct: 26 RDDGIYIDGTFGRGGHSRLILERLGPGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAH 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 LDAALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A +I +VI+DYGEERFA +IAK IV RS + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADARDIARVIRDYGEERFAVQIAKAIVARRSESGTRGPLDRTSELAALVAQAVKTREKGQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI++NQEL +L LK F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHVNQELADLETGLKAAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSTAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|17547571|ref|NP_520973.1| S-adenosyl-methyltransferase MraW [Ralstonia solanacearum GMI1000]
gi|20138981|sp|Q8XVH9.1|RSMH_RALSO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|17429875|emb|CAD16559.1| putative s-adenosyl-methyltransferase mraw protein [Ralstonia
solanacearum GMI1000]
Length = 319
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 188/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS ILERLG GRLIA DKD +++ + D+RF+I H+ F
Sbjct: 26 RDDGIYIDGTFGRGGHSRLILERLGPGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAH 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 LDAALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A E +I +VI+DYGEERFA +IAK IV R + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADERDIARVIRDYGEERFAVQIAKAIVARRRESGTRGPLDRTSELAALVAQAVKTREKGQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI++NQEL +L LK F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHVNQELADLETGLKSAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSAAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|312795053|ref|YP_004027975.1| S-adenosyl-methyltransferase mraW [Burkholderia rhizoxinica HKI
454]
gi|312166828|emb|CBW73831.1| S-adenosyl-methyltransferase mraW (EC 2.1.1.-) [Burkholderia
rhizoxinica HKI 454]
Length = 317
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 188/281 (66%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIY+D TFG+GGHS +L RL RLIA DKD +++ +
Sbjct: 14 VLLDEAVDALIT---RADGIYVDGTFGRGGHSRAVLARLAPAARLIAFDKDPQAIEVARG 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D R +++H F +L +L ++ G+L DLG+SS QI++ RGFSF DGPLDMR
Sbjct: 71 IADPRLNVVHGSFAQLRDVLAARGGVRVSGVLLDLGVSSPQIDDPARGFSFRHDGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA+ E + +VI+DYGEERFA +IAK IV R+ + PI RT++L
Sbjct: 131 MDPTRGESAAQWLAHVDERELIEVIRDYGEERFAVQIAKAIVARRAESGRLGPIVRTREL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
EI+ ++++ ++ ++PATRTFQAIRI+INQEL L + L+ + L GR+VVISFHS
Sbjct: 191 AEIVARAVKTREKGQDPATRTFQAIRIHINQELAELPVVLETALESLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F + + P +DRRLPI L P ++ L R
Sbjct: 251 LEDRIVKRFFQSHARAPAVDRRLPIRAADLPSPPLRILGRV 291
>gi|299065600|emb|CBJ36772.1| S-adenosyl-dependent methyl transferase [Ralstonia solanacearum
CMR15]
Length = 319
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 188/275 (68%), Gaps = 11/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +GIYID TFG+GGHS ILERLG GRLIA DKD +++ + D+RF+I H+ F +
Sbjct: 26 RDDGIYIDGTFGRGGHSRLILERLGSGGRLIAFDKDPAAITEAGTVEDARFAIEHDSFAQ 85
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I ++ G+L DLGISS QI+ RGFSF +DGPLDMRMD TRGI+A++WLA
Sbjct: 86 MGSALDARGIGRVAGVLLDLGISSPQIDEGARGFSFRMDGPLDMRMDTTRGITAAQWLAE 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQLVEIILKSIRGNKRYK 417
A E +I +VI+DYGEERFA +IAK IV R + P+ RT +L ++ ++++ ++ +
Sbjct: 146 ADERDIARVIRDYGEERFAVQIAKAIVARRRESGTRGPLDRTSELAALVAQAVKTREKGQ 205
Query: 418 NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF--- 474
+PATRTFQA+RI+INQEL +L LK F++L GR+VVISFHSLEDRIVK F+
Sbjct: 206 DPATRTFQALRIHINQELADLETGLKAAFERLEQGGRLVVISFHSLEDRIVKRFMQALAR 265
Query: 475 --NTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
+ P + RR P+ + L P+++ L R +P +
Sbjct: 266 PEQSAAPEM-RRAPLRAHELPAPQLRLLGRVRPSE 299
>gi|295677772|ref|YP_003606296.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. CCGE1002]
gi|295437615|gb|ADG16785.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. CCGE1002]
Length = 313
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 186/281 (66%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L R +G Y+D TFG+GGHS +LERLG+ GRLIA DKD +++ K
Sbjct: 10 VLLNEAVDALVT---RADGTYVDGTFGRGGHSRLVLERLGEAGRLIAFDKDPLAIATAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+I+H F L + + + ++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IADPRFAIVHESFASLRAAMAERGVGRVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL L + L+ L GR+VVISFHS
Sbjct: 187 AQIVANVVKTREKGKDPATRTFQAIRIHVNQELAELQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRV 287
>gi|307731080|ref|YP_003908304.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. CCGE1003]
gi|307585615|gb|ADN59013.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. CCGE1003]
Length = 313
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 187/280 (66%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS ++LE+LG+ GRLIA DKD +++ +
Sbjct: 10 VLLEEAVEALVT---RADGVYVDGTFGRGGHSRRVLEKLGEAGRLIAFDKDPLAIATAQQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+I+H F L + + I+++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IADPRFAIVHESFASLRTAIAERGIERVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 187 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLAR 501
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGR 286
>gi|413958950|ref|ZP_11398189.1| 16S rRNA m(4)C1402 methyltransferase [Burkholderia sp. SJ98]
gi|413941530|gb|EKS73490.1| 16S rRNA m(4)C1402 methyltransferase [Burkholderia sp. SJ98]
Length = 313
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 189/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +GIYID TFG+GGHS IL+RLG GRLIA DKD +++ +
Sbjct: 10 VLLKEAVDGLLT---RADGIYIDGTFGRGGHSRAILQRLGDAGRLIAFDKDPLAIATAQQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I DSRFSI+H+ F L + + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IQDSRFSIVHDSFAALRDAASERGVGRVSGVLLDLGVSSPQVDDPERGFSFRAEGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA AT I +VI+DYGEERFA +IAK +V R+ + P+ T++L
Sbjct: 127 MDPTRGESAAEWLARATVQEITEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTREL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
EI+ ++ ++ K+PATRTFQAIRI++NQEL L + L+ L GR+VVISFHS
Sbjct: 187 AEIVGHVVKTREKGKDPATRTFQAIRIHVNQELAELQVVLESALALLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P ++ + R P
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLRVVGRVFP 289
>gi|377821741|ref|YP_004978112.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. YI23]
gi|357936576|gb|AET90135.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. YI23]
Length = 317
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 189/285 (66%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G+YID TFG+GGHS IL+RLG GRLIA DKD +++ +
Sbjct: 14 VLLQEAVDGLIT---RTDGVYIDGTFGRGGHSRAILQRLGDAGRLIAFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I DSRFSI+H+ F L + + ++ G+L DLG+SS Q+++ RGFSF GPLDMR
Sbjct: 71 IQDSRFSIVHDSFAALREAASERGVGRVSGVLLDLGVSSPQVDDPERGFSFRAQGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T++L
Sbjct: 131 MDPTRGESAAEWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTREL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
EI+ ++ ++ K+PATRTFQAIRI++NQEL L + L+ L GR+VVISFHS
Sbjct: 191 AEIVGNVVKTREKGKDPATRTFQAIRIHVNQELAELQVVLESALALLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P ++ + R P +
Sbjct: 251 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLRVVGRVFPSE 295
>gi|91785301|ref|YP_560507.1| S-adenosyl-methyltransferase MraW [Burkholderia xenovorans LB400]
gi|122970134|sp|Q13TY4.1|RSMH_BURXL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|91689255|gb|ABE32455.1| S-adenosyl-methyltransferase, cell division cytoplasmic protein,
MraW [Burkholderia xenovorans LB400]
Length = 317
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 185/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS +LE+LG+ GRLIA DKD +++ +
Sbjct: 14 VLLEEAVQALVT---RADGVYVDGTFGRGGHSRLVLEKLGESGRLIAFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF I+H F L + + + ++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 71 ITDPRFGIVHESFASLRTAMAERGVGRVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 251 LEDRIVKRFMQAHASTPAVDRRLPIRAVDLPSPPLKIIGRV 291
>gi|171316199|ref|ZP_02905422.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria MEX-5]
gi|171098613|gb|EDT43410.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria MEX-5]
Length = 313
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 189/285 (66%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RL + GRLIA DKD ++ +
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLAEAGRLIAFDKDPRAIETAQR 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPSLKIISRQFPSE 291
>gi|221213285|ref|ZP_03586260.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CGD1]
gi|221166737|gb|EED99208.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CGD1]
Length = 313
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLGPAGRLIAFDKDPRAIETAQS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 MADARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K + R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRQFPSE 291
>gi|170700174|ref|ZP_02891192.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria IOP40-10]
gi|172059541|ref|YP_001807193.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria MC40-6]
gi|263446887|sp|B1YSR6.1|RSMH_BURA4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|170134906|gb|EDT03216.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria IOP40-10]
gi|171992058|gb|ACB62977.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria MC40-6]
Length = 313
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 189/285 (66%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RL + GRLIA DKD ++ +
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLAEAGRLIAFDKDPRAIETAQR 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|385207959|ref|ZP_10034827.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. Ch1-1]
gi|385180297|gb|EIF29573.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. Ch1-1]
Length = 313
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 185/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS +LE+LG+ GRLIA DKD +++ +
Sbjct: 10 VLLEEAVQALVT---RADGVYVDGTFGRGGHSRLVLEKLGESGRLIAFDKDPLAIATAQQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF I+H F L + + + ++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 ITDPRFGIVHESFASLRTAMAERGVGRVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 187 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 247 LEDRIVKRFMQAHASTPAVDRRLPIRAVDLPSPPLKIIGRV 287
>gi|421478749|ref|ZP_15926485.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CF2]
gi|400224238|gb|EJO54492.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CF2]
Length = 313
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLGPAGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IGDARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K + R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRQFPSE 291
>gi|186477429|ref|YP_001858899.1| S-adenosyl-methyltransferase MraW [Burkholderia phymatum STM815]
gi|263446931|sp|B2JHG8.1|RSMH_BURP8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|184193888|gb|ACC71853.1| S-adenosyl-methyltransferase MraW [Burkholderia phymatum STM815]
Length = 317
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 185/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+N L R++GIYID TFG+GGHS +L +LG+ GRLIA DKD +++ +
Sbjct: 14 VLLEEAVNALVT---RVDGIYIDGTFGRGGHSRAVLAKLGEAGRLIAFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D RF I+H F L + + + ++ G+L DLG+SS Q ++ RGFSF DGPLDMR
Sbjct: 71 VADPRFEIVHESFASLRDAMSERAVGRVSGVLLDLGVSSPQFDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQEMTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ ++ P +DRRLPI L P +K L R
Sbjct: 251 LEDRIVKRFMQTHSSAPAVDRRLPIRAVDLPSPPLKLLGRV 291
>gi|416980156|ref|ZP_11937949.1| 16S rRNA m(4)C1402 methyltranserfase [Burkholderia sp. TJI49]
gi|325519765|gb|EGC99070.1| 16S rRNA m(4)C1402 methyltranserfase [Burkholderia sp. TJI49]
Length = 313
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 187/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGVYVDGTFGRGGHSRAVLARLGPGGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IGDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ +++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K + R P
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRQFP 289
>gi|161526013|ref|YP_001581025.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans ATCC
17616]
gi|189349270|ref|YP_001944898.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans ATCC
17616]
gi|263446911|sp|A9AJ24.1|RSMH_BURM1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|160343442|gb|ABX16528.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans ATCC
17616]
gi|189333292|dbj|BAG42362.1| S-adenosyl-methyltransferase [Burkholderia multivorans ATCC 17616]
Length = 313
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLGPAGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IGDARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K + R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRQFPSE 291
>gi|221202506|ref|ZP_03575536.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CGD2M]
gi|221208172|ref|ZP_03581177.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CGD2]
gi|421473690|ref|ZP_15921783.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans ATCC
BAA-247]
gi|221172075|gb|EEE04517.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CGD2]
gi|221177601|gb|EEE10018.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans CGD2M]
gi|400220436|gb|EJO50971.1| S-adenosyl-methyltransferase MraW [Burkholderia multivorans ATCC
BAA-247]
Length = 313
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLGPAGRLIAFDKDPRAIETAQA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 MADARFSIVHDSFASMRGALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K + R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRQFPSE 291
>gi|115350509|ref|YP_772348.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria AMMD]
gi|123322723|sp|Q0BIK9.1|RSMH_BURCM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|115280497|gb|ABI86014.1| S-adenosyl-methyltransferase MraW [Burkholderia ambifaria AMMD]
Length = 313
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 189/285 (66%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RL + GRLIA DKD ++ +
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPRAIETAQR 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|134294639|ref|YP_001118374.1| S-adenosyl-methyltransferase MraW [Burkholderia vietnamiensis G4]
gi|263446940|sp|A4JB86.1|RSMH_BURVG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|134137796|gb|ABO53539.1| S-adenosyl-methyltransferase MraW [Burkholderia vietnamiensis G4]
Length = 313
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 189/285 (66%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIY+D TFG+GGHS +L RL GRLIA DKD ++ +
Sbjct: 10 VLLDEAVDSLVT---RPDGIYVDGTFGRGGHSRAVLARLAPGGRLIAFDKDPRAIETAQR 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|37527526|ref|NP_930870.1| S-adenosyl-methyltransferase MraW [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|42559441|sp|Q7N139.1|RSMH_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|36786961|emb|CAE16035.1| S-adenosyl-methyltransferase MraW [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 314
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/286 (50%), Positives = 199/286 (69%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++ +
Sbjct: 11 VLLDEAVNGLNI---RENGIYIDGTFGRGGHSRLILSQLGTEGRLIAIDRDPQAIEVAKA 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +K I KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFSIVHGPFSKLAHYTEKAGLIGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NAT +I V++ +GEERFAK+IA+ IV PITRTK L ++
Sbjct: 128 RMDPTRGQSAAEWLMNATADDIAWVLKTFGEERFAKRIARAIVACNQEEPITRTKALADL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ +++K+PAT++FQAIRIYIN EL+ + AL+ + L +GR+ VISFHSLED
Sbjct: 188 IAQASPIKEKHKHPATKSFQAIRIYINSELEEIEQALEGALQVLAPQGRLSVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPK----MKFLARCKPKKK 507
RIVK FI N++ P + LP+ + + +K + + KP ++
Sbjct: 248 RIVKRFIRQNSRGPQVPAGLPLTEEQLKARGGRSLKSIGKMKPSEE 293
>gi|387901223|ref|YP_006331562.1| rRNA small subunit methyltransferase H [Burkholderia sp. KJ006]
gi|387576115|gb|AFJ84831.1| rRNA small subunit methyltransferase H [Burkholderia sp. KJ006]
Length = 313
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 189/285 (66%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIY+D TFG+GGHS +L RL GRLIA DKD ++ +
Sbjct: 10 VLLDEAVDSLVT---RPDGIYVDGTFGRGGHSRAVLARLAPGGRLIAFDKDPRAIETAQR 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIVSRQFPSE 291
>gi|440289116|ref|YP_007341881.1| S-adenosyl-methyltransferase MraW [Enterobacteriaceae bacterium
strain FGI 57]
gi|440048638|gb|AGB79696.1| S-adenosyl-methyltransferase MraW [Enterobacteriaceae bacterium
strain FGI 57]
Length = 313
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/262 (52%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++ N
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAVANT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALADYVSERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ YGEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTYGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 VAAAMPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGSIDVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|350545046|ref|ZP_08914561.1| rRNA small subunit methyltransferase H [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527188|emb|CCD38741.1| rRNA small subunit methyltransferase H [Candidatus Burkholderia
kirkii UZHbot1]
Length = 317
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 189/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +GIYID TFG+GGHS IL+RLG GRLIA DKD +++ K
Sbjct: 14 VLLKEAVDGLIT---RTDGIYIDGTFGRGGHSRAILQRLGDAGRLIAFDKDPLAIATAAK 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I DSRFSI+H+ F L + ++K+ G+L DLG+SS Q+++ RGFSF +GPLD+R
Sbjct: 71 IQDSRFSIMHDSFAALRDAANERGVQKVSGVLLDLGVSSPQVDDPERGFSFRAEGPLDVR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T++L
Sbjct: 131 MDPTRGESAAEWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLNSTREL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
EI+ ++ ++ K+PATRTFQAIRI++NQEL L + L+ L GR+VVISFHS
Sbjct: 191 AEIVGNVVKTREKGKDPATRTFQAIRIHVNQELAELQVVLESALALLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ P +DRRLPI L P ++ + R P
Sbjct: 251 LEDRIVKRFMQARASAPAVDRRLPIRAVDLPSPPLRLVGRVFP 293
>gi|307132591|ref|YP_003884607.1| 16S rRNA m(4)C1402 methyltransferase [Dickeya dadantii 3937]
gi|306530120|gb|ADN00051.1| 16S rRNA m(4)C1402 methyltransferase [Dickeya dadantii 3937]
Length = 313
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/262 (53%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL RLG +GRL+AID+D ++V++ N
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSRLGPEGRLLAIDRDPQAVAVANT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RFSIIH F+EL + + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDARFSIIHGPFSELAEYVDERGLTGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV + P+TRTK L E+
Sbjct: 127 RMDPTRGQSAAEWLMKAEAEDIAWVLKTFGEERFAKRIARAIVERNRVEPLTRTKALAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 187 IAAASPIREKHKHPATRSFQAIRIYINSELEEIERALDGALQVLAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI +++ P + LP+
Sbjct: 247 RIVKRFIRQHSRGPQVPAGLPL 268
>gi|271502050|ref|YP_003335076.1| S-adenosyl-methyltransferase MraW [Dickeya dadantii Ech586]
gi|270345605|gb|ACZ78370.1| S-adenosyl-methyltransferase MraW [Dickeya dadantii Ech586]
Length = 313
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL LG +GRL+AID+D ++V++ N
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSHLGPEGRLLAIDRDPQAVAVANT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RFSIIH F+EL D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDARFSIIHGPFSELADYVDERGLTGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV I P+TRTK L E+
Sbjct: 127 RMDPTRGQSAAEWLMKAEADDIAWVLKTFGEERFAKRIARAIVERNRIDPLTRTKALAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL K L +GR+ VISFHSLED
Sbjct: 187 IAAASPIREKHKHPATRSFQAIRIYINSELEEIERALDGALKVLAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI +++ P + LP+
Sbjct: 247 RIVKRFIRQHSRGPQVPAGLPL 268
>gi|425286593|ref|ZP_18677547.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3006]
gi|408219704|gb|EKI43822.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3006]
Length = 313
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + R ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATRVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|397166765|ref|ZP_10490209.1| S-adenosyl-methyltransferase MraW [Enterobacter radicincitans DSM
16656]
gi|396091853|gb|EJI89419.1| S-adenosyl-methyltransferase MraW [Enterobacter radicincitans DSM
16656]
Length = 313
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL RLG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSRLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALADYVSERELVGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNRLDPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIELALKNSLGVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|407714831|ref|YP_006835396.1| ribosomal RNA small subunit methyltransferase H [Burkholderia
phenoliruptrix BR3459a]
gi|407237015|gb|AFT87214.1| Ribosomal RNA small subunit methyltransferase H [Burkholderia
phenoliruptrix BR3459a]
Length = 317
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 184/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS +LE+LG+ GRLIA DKD +++ +
Sbjct: 14 VLLEEAVEALVT---RADGVYVDGTFGRGGHSRLVLEKLGEAGRLIAFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H F L + I+++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 71 IADPRFGIVHESFASLRTAIAARGIERVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALALLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 251 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRV 291
>gi|432404965|ref|ZP_19647689.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE28]
gi|430933190|gb|ELC53601.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE28]
Length = 313
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGILFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILFDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|418020488|ref|ZP_12659746.1| S-adenosyl-methyltransferase [Candidatus Regiella insecticola
R5.15]
gi|347604163|gb|EGY28871.1| S-adenosyl-methyltransferase [Candidatus Regiella insecticola
R5.15]
Length = 313
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 195/275 (70%), Gaps = 8/275 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L +A++ LN+ R +GIY+D TFG+GGHS IL RLG++GRLIAID+D ++V +
Sbjct: 10 VLLEQAVHCLNL---RDDGIYVDGTFGRGGHSRLILSRLGQQGRLIAIDRDPQAVEVAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+EL ++ + I +IDG+LFDLG+SS Q++N RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIIHGPFSELARYAQESDLIGRIDGVLFDLGVSSPQLDNPQRGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A+ I V++ +GEERFAK++A+ IV P+ RTK+L ++
Sbjct: 127 RMDPSRGLSAAQWLMKASADEIAWVLKTFGEERFAKRLARAIVERNQQQPMNRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I+ + +++K+PATR+FQAIRIYIN EL+ ++ AL+ L KGRI VISFHSLED
Sbjct: 187 IVDILPMREKHKHPATRSFQAIRIYINSELEEITQALEASLSVLAPKGRISVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA 500
RIVKNFI ++ P I P+ L E +++ +
Sbjct: 247 RIVKNFIRQQSRGPQI----PVGMPLTETQLRLMG 277
>gi|167586011|ref|ZP_02378399.1| S-adenosyl-methyltransferase MraW [Burkholderia ubonensis Bu]
Length = 313
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIY+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGIYVDGTFGRGGHSRAVLARLGAAGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF+I+H+ F + L I K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFAIVHDSFASMQGALAARGIGKVSGVLLDLGVSSPQVDDPQRGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K + R P
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRKFP 289
>gi|167912660|ref|ZP_02499751.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 112]
Length = 313
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 187/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R++G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RLDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L I ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGIGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPRPPLKLLGRMFP 289
>gi|254246426|ref|ZP_04939747.1| S-adenosyl-methyltransferase [Burkholderia cenocepacia PC184]
gi|124871202|gb|EAY62918.1| S-adenosyl-methyltransferase [Burkholderia cenocepacia PC184]
Length = 319
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS +L RL GRLIA DKD ++
Sbjct: 16 VLLDEAVESLVT---RPDGVYVDGTFGRGGHSRAVLARLASAGRLIAFDKDPRAIETAQG 72
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 73 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 132
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 133 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 192
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 193 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 252
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 253 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 297
>gi|170696713|ref|ZP_02887828.1| S-adenosyl-methyltransferase MraW [Burkholderia graminis C4D1M]
gi|170138376|gb|EDT06589.1| S-adenosyl-methyltransferase MraW [Burkholderia graminis C4D1M]
Length = 317
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 185/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS +LE+LG+ GRLIA DKD +++ +
Sbjct: 14 VLLEEAVAALVT---RADGVYVDGTFGRGGHSRLVLEKLGQAGRLIAFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H F L + + I+++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 71 IGDPRFGIVHESFASLRTAIAERGIERVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 251 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRV 291
>gi|381405695|ref|ZP_09930379.1| 16S rRNA m(4)C1402 methyltransferase [Pantoea sp. Sc1]
gi|380738894|gb|EIB99957.1| 16S rRNA m(4)C1402 methyltransferase [Pantoea sp. Sc1]
Length = 313
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 197/283 (69%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KG+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGEKGQLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+ L + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIIHGPFSALAEYVSERDLVGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRT++L E+
Sbjct: 127 RMDPSRGHSAAEWLLQAEEADIAFVLKTYGEERFAKRIARAIVERNREAPMTRTRELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI+IN EL+ + IALK + L +GR+ VISFHSLED
Sbjct: 187 IAVATPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGAVEVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
R+VK F+ ++ P + LP+ + ++K L + P
Sbjct: 247 RLVKRFMRDQSRGPQVPAGLPMTEHQLRALGGRELKLLGKMSP 289
>gi|402567713|ref|YP_006617058.1| MraW protein [Burkholderia cepacia GG4]
gi|402248910|gb|AFQ49364.1| MraW protein [Burkholderia cepacia GG4]
Length = 313
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RL GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLAPAGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L I+K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGIEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|455643685|gb|EMF22809.1| 16S rRNA m(4)C1402 methyltransferase [Citrobacter freundii GTC
09479]
Length = 313
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I+ ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IVAAMPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|300722051|ref|YP_003711331.1| S-adenosyl-dependent methyltransferase [Xenorhabdus nematophila
ATCC 19061]
gi|297628548|emb|CBJ89120.1| S-adenosyl-dependent methyl transferase [Xenorhabdus nematophila
ATCC 19061]
Length = 314
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 194/283 (68%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI+ +GIYID TFG+GGHS IL +LG GRL+AID+D +++
Sbjct: 11 VLLDEAVNGLNIQE---DGIYIDGTFGRGGHSRLILSKLGPNGRLMAIDRDPQAIEASKA 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI H F+EL ++ + + KI+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDERFSITHGPFSELATYVEDADLVGKINGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SAS+WL A E +I V++ +GEERFAK+IA+ IV P+TRT++L E+
Sbjct: 128 RMDPTRGQSASEWLMKAEEEDIAWVLKTFGEERFAKRIARAIVARSQEQPMTRTRELAEL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 188 IAQASPIKEKHKHPATRSFQAIRIYINSELEEIERALDGALRVLAPQGRLSVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
RIVK FI N++ P + LP+ + +KF+ + KP
Sbjct: 248 RIVKRFIRQNSQGPQVPAGLPLTEAQLKAMGGRSLKFIGKMKP 290
>gi|116688575|ref|YP_834198.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia HI2424]
gi|170731875|ref|YP_001763822.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia MC0-3]
gi|263446896|sp|B1JUW4.1|RSMH_BURCC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446902|sp|A0K478.1|RSMH_BURCH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116646664|gb|ABK07305.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia HI2424]
gi|169815117|gb|ACA89700.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia MC0-3]
Length = 313
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS +L RL GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGVYVDGTFGRGGHSRAVLARLASAGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|420369580|ref|ZP_14870273.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 1235-66]
gi|391321147|gb|EIQ77902.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 1235-66]
Length = 313
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|254191020|ref|ZP_04897526.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
Pasteur 52237]
gi|386860389|ref|YP_006273338.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1026b]
gi|418538852|ref|ZP_13104453.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1026a]
gi|157938694|gb|EDO94364.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
Pasteur 52237]
gi|385346533|gb|EIF53208.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1026a]
gi|385657517|gb|AFI64940.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1026b]
Length = 313
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L I ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGIGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPSPPLKLLGRMFP 289
>gi|78065113|ref|YP_367882.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. 383]
gi|88909190|sp|Q39JX8.1|RSMH_BURS3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|77965858|gb|ABB07238.1| methyltransferase [Burkholderia sp. 383]
Length = 313
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +GIY+D TFG+GGHS +L RL GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGIYVDGTFGRGGHSRAVLARLAPGGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|301026110|ref|ZP_07189585.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 69-1]
gi|419919027|ref|ZP_14437198.1| S-adenosyl-methyltransferase MraW [Escherichia coli KD2]
gi|432768891|ref|ZP_20003271.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE50]
gi|432791311|ref|ZP_20025408.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE78]
gi|432797281|ref|ZP_20031310.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE79]
gi|432856894|ref|ZP_20084145.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE144]
gi|432958813|ref|ZP_20149671.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE202]
gi|433061292|ref|ZP_20248266.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE125]
gi|300395681|gb|EFJ79219.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 69-1]
gi|388388925|gb|EIL50472.1| S-adenosyl-methyltransferase MraW [Escherichia coli KD2]
gi|431320284|gb|ELG07927.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE50]
gi|431342979|gb|ELG29949.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE78]
gi|431346495|gb|ELG33400.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE79]
gi|431395402|gb|ELG78914.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE144]
gi|431483308|gb|ELH63000.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE202]
gi|431589571|gb|ELI60785.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE125]
Length = 313
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++S+
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAISVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|308185651|ref|YP_003929782.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Pantoea
vagans C9-1]
gi|308056161|gb|ADO08333.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Pantoea
vagans C9-1]
Length = 313
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/283 (48%), Positives = 199/283 (70%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KGRLIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGEKGRLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+ L + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIIHGPFSALAEYVAERDLVGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA++WL +A E +I V++ YGEERF+K+IA+ IV P+TRT++L E+
Sbjct: 127 RMDPSRGHSAAEWLLHAEEADIAFVLKTYGEERFSKRIARAIVERNREQPMTRTRELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATR+FQAIRI+IN EL+ + IALK + L +GR+ VISFHSLED
Sbjct: 187 ISVAMPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGAVEVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
R+VK F+ ++ P + +P+ + ++K L + P
Sbjct: 247 RLVKRFMRDQSRGPQVPAGIPMTEHQLRALGGRELKLLGKMSP 289
>gi|283835144|ref|ZP_06354885.1| S-adenosyl-methyltransferase MraW [Citrobacter youngae ATCC 29220]
gi|291069444|gb|EFE07553.1| S-adenosyl-methyltransferase MraW [Citrobacter youngae ATCC 29220]
Length = 313
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|217425690|ref|ZP_03457180.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 576]
gi|418539621|ref|ZP_13105205.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1258a]
gi|418545871|ref|ZP_13111110.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1258b]
gi|217391278|gb|EEC31310.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 576]
gi|385364156|gb|EIF69895.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1258a]
gi|385365984|gb|EIF71633.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1258b]
Length = 313
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L I ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGIGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPRPPLKLLGRMFP 289
>gi|420345162|ref|ZP_14846597.1| S-adenosyl-methyltransferase MraW [Shigella boydii 965-58]
gi|391276945|gb|EIQ35706.1| S-adenosyl-methyltransferase MraW [Shigella boydii 965-58]
Length = 313
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 197/286 (68%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATSVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIY----NYLFEPKMKFLARCKPKKK 507
RIVK F+ N++ P + LP+ N L +++ L + P ++
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPMTEEQLNKLGGRQLRALGKLMPGEE 292
>gi|167564207|ref|ZP_02357123.1| S-adenosyl-methyltransferase MraW [Burkholderia oklahomensis EO147]
gi|167571357|ref|ZP_02364231.1| S-adenosyl-methyltransferase MraW [Burkholderia oklahomensis C6786]
Length = 313
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 187/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLGRLGAAGRLIAFDKDPRAIETAKG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F L L+ + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAALKGALEARGVGRVSGVLLDLGVSSPQVDDPERGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSSLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFMQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFP 289
>gi|126454576|ref|YP_001067794.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1106a]
gi|134280340|ref|ZP_01767051.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 305]
gi|167847424|ref|ZP_02472932.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei B7210]
gi|167896013|ref|ZP_02483415.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 7894]
gi|167904399|ref|ZP_02491604.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei NCTC
13177]
gi|167920627|ref|ZP_02507718.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
BCC215]
gi|242314397|ref|ZP_04813413.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1106b]
gi|254180538|ref|ZP_04887136.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1655]
gi|254199129|ref|ZP_04905544.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei S13]
gi|263446924|sp|A3NZM3.1|RSMH_BURP0 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|126228218|gb|ABN91758.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1106a]
gi|134248347|gb|EBA48430.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 305]
gi|169656959|gb|EDS88356.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei S13]
gi|184211077|gb|EDU08120.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1655]
gi|242137636|gb|EES24038.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1106b]
Length = 313
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPSPPLKLLGRMFP 289
>gi|403520232|ref|YP_006654366.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
BPC006]
gi|403075875|gb|AFR17455.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
BPC006]
Length = 319
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 16 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 72
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 73 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 132
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 133 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 192
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 193 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 252
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 253 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPSPPLKLLGRMFP 295
>gi|330815435|ref|YP_004359140.1| S-adenosyl-methyltransferase MraW [Burkholderia gladioli BSR3]
gi|327367828|gb|AEA59184.1| S-adenosyl-methyltransferase MraW [Burkholderia gladioli BSR3]
Length = 313
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 191/283 (67%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +GIY+D TFG+GGHS +L+RL + GRLIA DKD ++ ++
Sbjct: 10 VLLDEAVDALVT---RPDGIYVDGTFGRGGHSRLVLDRLAEGGRLIAFDKDPLAIETASR 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RFSI+H+ F L L + + ++ G+L DLG+SS QI++ RGFSF +GPLDMR
Sbjct: 67 VGDTRFSIVHDSFASLGGALAERGVGRVTGVLLDLGVSSPQIDDPERGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDTTRGESAADWLARASLQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ +++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLESALSSLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKLLGRKFP 289
>gi|254299374|ref|ZP_04966824.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 406e]
gi|157808911|gb|EDO86081.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 406e]
Length = 319
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 16 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 72
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 73 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 132
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 133 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 192
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 193 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 252
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 253 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPRPPLKLLGRMFP 295
>gi|417269254|ref|ZP_12056614.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.3884]
gi|386228059|gb|EII55415.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.3884]
Length = 313
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LPI
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPI 268
>gi|237729380|ref|ZP_04559861.1| S-adenosyl-methyltransferase MraW [Citrobacter sp. 30_2]
gi|365103950|ref|ZP_09333611.1| ribosomal RNA small subunit methyltransferase H [Citrobacter
freundii 4_7_47CFAA]
gi|395229159|ref|ZP_10407475.1| S-adenosyl-methyltransferase MraW [Citrobacter sp. A1]
gi|421844712|ref|ZP_16277869.1| 16S rRNA m(4)C1402 methyltransferase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|424729258|ref|ZP_18157860.1| s-adenosyl-methyltransferase [Citrobacter sp. L17]
gi|226909109|gb|EEH95027.1| S-adenosyl-methyltransferase MraW [Citrobacter sp. 30_2]
gi|363644563|gb|EHL83844.1| ribosomal RNA small subunit methyltransferase H [Citrobacter
freundii 4_7_47CFAA]
gi|394717212|gb|EJF22910.1| S-adenosyl-methyltransferase MraW [Citrobacter sp. A1]
gi|411774191|gb|EKS57701.1| 16S rRNA m(4)C1402 methyltransferase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|422895982|gb|EKU35768.1| s-adenosyl-methyltransferase [Citrobacter sp. L17]
Length = 313
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|419264557|ref|ZP_13806947.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10C]
gi|424529805|ref|ZP_17973474.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4422]
gi|424572833|ref|ZP_18013304.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1845]
gi|424584662|ref|ZP_18024282.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1863]
gi|425095475|ref|ZP_18498535.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.4870]
gi|425153434|ref|ZP_18553021.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA34]
gi|425339610|ref|ZP_18726891.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1848]
gi|425370236|ref|ZP_18755242.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1864]
gi|429064502|ref|ZP_19128402.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0672]
gi|378120171|gb|EHW81652.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10C]
gi|390872504|gb|EIP33793.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4422]
gi|390914205|gb|EIP72749.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1863]
gi|390926651|gb|EIP84210.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1845]
gi|408087319|gb|EKH20768.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA34]
gi|408271391|gb|EKI91518.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1848]
gi|408302204|gb|EKJ19739.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1864]
gi|408560883|gb|EKK37131.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.4870]
gi|427337285|gb|EKW98203.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0672]
Length = 304
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 1 MLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 57
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 58 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 118 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 178 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 237
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 238 RIVKRFMRENSRGPQVPAGLPM 259
>gi|366159474|ref|ZP_09459336.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia sp. TW09308]
gi|432375007|ref|ZP_19618030.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE11]
gi|430892265|gb|ELC14757.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE11]
Length = 313
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL +A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQSAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|238026124|ref|YP_002910355.1| 16S rRNA m(4)C1402 methyltransferase [Burkholderia glumae BGR1]
gi|237875318|gb|ACR27651.1| S-adenosyl-methyltransferase MraW [Burkholderia glumae BGR1]
Length = 313
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 187/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RL + GRLIA DKD +++ +
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPLAIATAQQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RFSI+H+ F L L + + ++ G+L DLG+SS QI++ RGFSF +GPLDMR
Sbjct: 67 IADPRFSIVHDSFASLGGALAERGVARVTGVLLDLGVSSPQIDDPERGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA A+ + +VI+DYGEERFA +IAK +V R + P+ T +L
Sbjct: 127 MDTTRGESAADWLARASLQELTEVIRDYGEERFAFQIAKALVARREESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ +++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLGAALSSLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFP 289
>gi|167838012|ref|ZP_02464871.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis
MSMB43]
Length = 313
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RL + GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLSEAGRLIAFDKDPRAIETAKG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IADARFEIVHDSFAAMKGALDARGVARVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSSLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFP 289
>gi|424902768|ref|ZP_18326281.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis
MSMB43]
gi|390930641|gb|EIP88042.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis
MSMB43]
Length = 319
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RL + GRLIA DKD ++
Sbjct: 16 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLSEAGRLIAFDKDPRAIETAKG 72
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 73 IADARFEIVHDSFAAMKGALDARGVARVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 132
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 133 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 192
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 193 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSSLEQGGRLVVISFHS 252
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 253 LEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFP 295
>gi|26246015|ref|NP_752054.1| S-adenosyl-methyltransferase MraW [Escherichia coli CFT073]
gi|300981119|ref|ZP_07175365.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 45-1]
gi|422362529|ref|ZP_16443093.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 153-1]
gi|432454856|ref|ZP_19697068.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE201]
gi|432510311|ref|ZP_19749171.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE220]
gi|432649448|ref|ZP_19885218.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE87]
gi|432781966|ref|ZP_20016153.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE63]
gi|432976783|ref|ZP_20165610.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE209]
gi|432993835|ref|ZP_20182456.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE218]
gi|432998252|ref|ZP_20186803.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE223]
gi|433056404|ref|ZP_20243506.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE124]
gi|433085727|ref|ZP_20272139.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE137]
gi|433114013|ref|ZP_20299839.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE153]
gi|433123677|ref|ZP_20309277.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE160]
gi|433137744|ref|ZP_20323040.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE167]
gi|433147495|ref|ZP_20332584.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE174]
gi|442606965|ref|ZP_21021758.1| rRNA small subunit methyltransferase H [Escherichia coli Nissle
1917]
gi|30173069|sp|Q8FL68.1|RSMH_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|26106412|gb|AAN78598.1|AE016755_98 S-adenosyl-methyltransferase mraW [Escherichia coli CFT073]
gi|300409021|gb|EFJ92559.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 45-1]
gi|315294723|gb|EFU54066.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 153-1]
gi|430986789|gb|ELD03355.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE201]
gi|431032454|gb|ELD45164.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE220]
gi|431194734|gb|ELE93949.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE87]
gi|431332859|gb|ELG20080.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE63]
gi|431483741|gb|ELH63430.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE209]
gi|431511573|gb|ELH89704.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE218]
gi|431516411|gb|ELH94021.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE223]
gi|431575700|gb|ELI48431.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE124]
gi|431611355|gb|ELI80634.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE137]
gi|431637956|gb|ELJ06006.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE153]
gi|431651252|gb|ELJ18518.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE160]
gi|431666101|gb|ELJ32804.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE167]
gi|431679991|gb|ELJ45870.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE174]
gi|441711714|emb|CCQ07735.1| rRNA small subunit methyltransferase H [Escherichia coli Nissle
1917]
Length = 313
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + + I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVADRDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVEHNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLHVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|53726017|ref|YP_104102.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei ATCC 23344]
gi|67643637|ref|ZP_00442382.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei GB8 horse 4]
gi|121598510|ref|YP_991829.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei SAVP1]
gi|124386348|ref|YP_001027322.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei NCTC 10229]
gi|126438415|ref|YP_001060543.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 668]
gi|126449153|ref|YP_001082741.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei NCTC 10247]
gi|162210064|ref|YP_334923.2| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1710b]
gi|166998645|ref|ZP_02264503.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei PRL-20]
gi|167721351|ref|ZP_02404587.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei DM98]
gi|254179030|ref|ZP_04885684.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei ATCC 10399]
gi|254202823|ref|ZP_04909186.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei FMH]
gi|254208165|ref|ZP_04914515.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei JHU]
gi|254259496|ref|ZP_04950550.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1710a]
gi|254357631|ref|ZP_04973905.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei 2002721280]
gi|418377723|ref|ZP_12965762.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 354a]
gi|418552323|ref|ZP_13117188.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 354e]
gi|88909189|sp|Q3JND0.2|RSMH_BURP1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|115311581|sp|Q62GR9.1|RSMH_BURMA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446914|sp|A3MR55.1|RSMH_BURM7 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446917|sp|A2S5V3.1|RSMH_BURM9 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446920|sp|A1V0S6.1|RSMH_BURMS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446928|sp|A3NDX2.1|RSMH_BURP6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|52429440|gb|AAU50033.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei ATCC 23344]
gi|121227320|gb|ABM49838.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei SAVP1]
gi|124294368|gb|ABN03637.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei NCTC 10229]
gi|126217908|gb|ABN81414.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 668]
gi|126242023|gb|ABO05116.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei NCTC 10247]
gi|147747070|gb|EDK54147.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei FMH]
gi|147752059|gb|EDK59126.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei JHU]
gi|148026695|gb|EDK84780.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei 2002721280]
gi|160694944|gb|EDP84952.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei ATCC 10399]
gi|238525016|gb|EEP88446.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei GB8 horse 4]
gi|243065324|gb|EES47510.1| S-adenosyl-methyltransferase MraW [Burkholderia mallei PRL-20]
gi|254218185|gb|EET07569.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1710a]
gi|385373157|gb|EIF78223.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 354e]
gi|385378061|gb|EIF82577.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 354a]
Length = 313
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPRPPLKLLGRMFP 289
>gi|261338924|ref|ZP_05966782.1| hypothetical protein ENTCAN_05122 [Enterobacter cancerogenus ATCC
35316]
gi|288318749|gb|EFC57687.1| S-adenosyl-methyltransferase MraW [Enterobacter cancerogenus ATCC
35316]
Length = 313
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIY+D TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYVDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ VISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|388603966|pdb|3TKA|A Chain A, Crystal Structure And Solution Saxs Of Methyltransferase
Rsmh From E.Coli
Length = 347
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 44 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 100
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 101 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 160
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 161 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 220
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 221 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 280
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 281 RIVKRFMRENSRGPQVPAGLPM 302
>gi|419921883|ref|ZP_14439916.1| S-adenosyl-methyltransferase MraW [Escherichia coli 541-15]
gi|388397012|gb|EIL58054.1| S-adenosyl-methyltransferase MraW [Escherichia coli 541-15]
Length = 313
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPAGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|187925450|ref|YP_001897092.1| S-adenosyl-methyltransferase MraW [Burkholderia phytofirmans PsJN]
gi|263446934|sp|B2SYY3.1|RSMH_BURPP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|187716644|gb|ACD17868.1| S-adenosyl-methyltransferase MraW [Burkholderia phytofirmans PsJN]
Length = 317
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 183/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS +LE+L + GRLIA DKD +++ +
Sbjct: 14 VLLEEAVQALVT---RADGVYVDGTFGRGGHSRLVLEKLAESGRLIAFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H F L + + + ++ G+L DLGISS QI++ RGFSF DGPLDMR
Sbjct: 71 IADPRFGIVHESFASLRTAIAERGVGRVSGVLLDLGISSPQIDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 251 LEDRIVKRFMQAHASTPAVDRRLPIRAVDLPSPPLKIIGRV 291
>gi|420334339|ref|ZP_14835962.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-315]
gi|391268516|gb|EIQ27441.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-315]
Length = 313
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEVDIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|76579862|gb|ABA49337.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 1710b]
Length = 413
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 110 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 166
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 167 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 226
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 227 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 286
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 287 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 346
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 347 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPRPPLKLLGRMFP 389
>gi|377577156|ref|ZP_09806139.1| ribosomal RNA small subunit methyltransferase H [Escherichia
hermannii NBRC 105704]
gi|377541684|dbj|GAB51304.1| ribosomal RNA small subunit methyltransferase H [Escherichia
hermannii NBRC 105704]
Length = 313
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRLIAID+D +++ N
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGPQGRLIAIDRDPQAIEAANA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + + + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVSDRDLLGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLLTAEESDITWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL + +ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELDEIELALKGSLDALAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|218698505|ref|YP_002406134.1| S-adenosyl-methyltransferase MraW [Escherichia coli IAI39]
gi|386622495|ref|YP_006142223.1| S-adenosyl-methyltransferase [Escherichia coli O7:K1 str. CE10]
gi|263446431|sp|B7NHI8.1|RSMH_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|218368491|emb|CAR16226.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli IAI39]
gi|349736233|gb|AEQ10939.1| S-adenosyl-methyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL + G++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQFGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|238760089|ref|ZP_04621239.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
aldovae ATCC 35236]
gi|238701708|gb|EEP94275.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
aldovae ATCC 35236]
Length = 320
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 190/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIDAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITDSRFSI+H F++L +++ + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDSRFSIVHGPFSDLAHYVRELDLVGRIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA+ WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGLSAADWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|419937943|ref|ZP_14454788.1| S-adenosyl-methyltransferase MraW [Escherichia coli 75]
gi|388411236|gb|EIL71420.1| S-adenosyl-methyltransferase MraW [Escherichia coli 75]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|387605562|ref|YP_006094418.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli 042]
gi|417584148|ref|ZP_12234942.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_B2F1]
gi|417826089|ref|ZP_12472672.1| S-adenosyl-methyltransferase MraW [Shigella flexneri J1713]
gi|419129643|ref|ZP_13674502.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5D]
gi|419363403|ref|ZP_13904588.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13E]
gi|419405231|ref|ZP_13945942.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15C]
gi|424125535|ref|ZP_17858777.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA9]
gi|424138155|ref|ZP_17870497.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA14]
gi|424566634|ref|ZP_18007600.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4448]
gi|425147820|ref|ZP_18547757.1| S-adenosyl-methyltransferase MraW [Escherichia coli 88.0221]
gi|425345487|ref|ZP_18732335.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1849]
gi|425376816|ref|ZP_18761249.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1865]
gi|284919862|emb|CBG32917.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli 042]
gi|335578469|gb|EGM63685.1| S-adenosyl-methyltransferase MraW [Shigella flexneri J1713]
gi|345332379|gb|EGW64837.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_B2F1]
gi|377983547|gb|EHV46791.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5D]
gi|378220481|gb|EHX80739.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13E]
gi|378241986|gb|EHY01952.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15C]
gi|390693747|gb|EIN68364.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA9]
gi|390715107|gb|EIN87974.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA14]
gi|390917643|gb|EIP76060.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4448]
gi|408280351|gb|EKI99903.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1849]
gi|408311517|gb|EKJ28522.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1865]
gi|408614191|gb|EKK87474.1| S-adenosyl-methyltransferase MraW [Escherichia coli 88.0221]
Length = 312
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 9 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 65
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 66 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 126 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 186 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 246 RIVKRFMRENSRGPQVPAGLPM 267
>gi|56412392|ref|YP_149467.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197361328|ref|YP_002140963.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|68565445|sp|Q5PDH4.1|RSMH_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826422|sp|B5BLG4.1|RSMH_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|56126649|gb|AAV76155.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197092803|emb|CAR58229.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 195/286 (68%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ISDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|167740320|ref|ZP_02413094.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 14]
gi|226199616|ref|ZP_03795172.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
Pakistan 9]
gi|225928362|gb|EEH24393.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
Pakistan 9]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGYAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L I ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGIGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPSPPLKLLGRMFP 289
>gi|415814169|ref|ZP_11505799.1| S-adenosyl-methyltransferase MraW [Escherichia coli LT-68]
gi|323171245|gb|EFZ56893.1| S-adenosyl-methyltransferase MraW [Escherichia coli LT-68]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|304396555|ref|ZP_07378436.1| S-adenosyl-methyltransferase MraW [Pantoea sp. aB]
gi|440760749|ref|ZP_20939852.1| rRNA small subunit methyltransferase H [Pantoea agglomerans 299R]
gi|304356064|gb|EFM20430.1| S-adenosyl-methyltransferase MraW [Pantoea sp. aB]
gi|436425502|gb|ELP23236.1| rRNA small subunit methyltransferase H [Pantoea agglomerans 299R]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/283 (48%), Positives = 199/283 (70%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KG+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGEKGKLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+ L + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIIHGPFSALAEYVSERDLVGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA++WL +A E +I V++ YGEERFAK+IA+ IV P+TRT++L E+
Sbjct: 127 RMDPSRGHSAAEWLLHAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTRELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATR+FQAIRI+IN EL+ + IALK + L +GR+ VISFHSLED
Sbjct: 187 ISIAMPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGAVQVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
R+VK F+ ++ P + +P+ + ++K L + P
Sbjct: 247 RLVKRFMRDQSRGPQVPAGIPMTEHQLRALGGRELKLLGKMSP 289
>gi|419942485|ref|ZP_14459088.1| S-adenosyl-methyltransferase MraW [Escherichia coli HM605]
gi|388423047|gb|EIL82596.1| S-adenosyl-methyltransferase MraW [Escherichia coli HM605]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIGQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|15799766|ref|NP_285778.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EDL933]
gi|15829340|ref|NP_308113.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
Sakai]
gi|16128075|ref|NP_414624.1| 16S rRNA m(4)C1402 methyltranserfase, SAM-dependent [Escherichia
coli str. K-12 substr. MG1655]
gi|82542686|ref|YP_406633.1| S-adenosyl-methyltransferase MraW [Shigella boydii Sb227]
gi|91209146|ref|YP_539132.1| S-adenosyl-methyltransferase [Escherichia coli UTI89]
gi|110640295|ref|YP_668023.1| S-adenosyl-methyltransferase MraW [Escherichia coli 536]
gi|157154775|ref|YP_001461252.1| S-adenosyl-methyltransferase MraW [Escherichia coli E24377A]
gi|157159553|ref|YP_001456871.1| S-adenosyl-methyltransferase MraW [Escherichia coli HS]
gi|168751408|ref|ZP_02776430.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4113]
gi|168755690|ref|ZP_02780697.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4401]
gi|168764039|ref|ZP_02789046.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4501]
gi|168771306|ref|ZP_02796313.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4486]
gi|168776926|ref|ZP_02801933.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4196]
gi|168781967|ref|ZP_02806974.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4076]
gi|168789609|ref|ZP_02814616.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC869]
gi|168801509|ref|ZP_02826516.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC508]
gi|170021562|ref|YP_001726516.1| S-adenosyl-methyltransferase MraW [Escherichia coli ATCC 8739]
gi|170079721|ref|YP_001729041.1| S-adenosyl-methyltransferase MraW [Escherichia coli str. K-12
substr. DH10B]
gi|170679711|ref|YP_001742204.1| S-adenosyl-methyltransferase MraW [Escherichia coli SMS-3-5]
gi|187731396|ref|YP_001878892.1| S-adenosyl-methyltransferase MraW [Shigella boydii CDC 3083-94]
gi|188494231|ref|ZP_03001501.1| S-adenosyl-methyltransferase MraW [Escherichia coli 53638]
gi|191167757|ref|ZP_03029564.1| S-adenosyl-methyltransferase MraW [Escherichia coli B7A]
gi|191174644|ref|ZP_03036126.1| S-adenosyl-methyltransferase MraW [Escherichia coli F11]
gi|193065897|ref|ZP_03046958.1| S-adenosyl-methyltransferase MraW [Escherichia coli E22]
gi|193070829|ref|ZP_03051762.1| S-adenosyl-methyltransferase MraW [Escherichia coli E110019]
gi|194429383|ref|ZP_03061908.1| S-adenosyl-methyltransferase MraW [Escherichia coli B171]
gi|194439418|ref|ZP_03071495.1| S-adenosyl-methyltransferase MraW [Escherichia coli 101-1]
gi|195939298|ref|ZP_03084680.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4024]
gi|208807673|ref|ZP_03250010.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4206]
gi|208812612|ref|ZP_03253941.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4045]
gi|208821818|ref|ZP_03262138.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4042]
gi|209400403|ref|YP_002268690.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4115]
gi|209917275|ref|YP_002291359.1| S-adenosyl-methyltransferase MraW [Escherichia coli SE11]
gi|217324681|ref|ZP_03440765.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
TW14588]
gi|218547539|ref|YP_002381330.1| S-adenosyl-methyltransferase MraW [Escherichia fergusonii ATCC
35469]
gi|218552665|ref|YP_002385578.1| S-adenosyl-methyltransferase MraW [Escherichia coli IAI1]
gi|218557022|ref|YP_002389935.1| S-adenosyl-methyltransferase MraW [Escherichia coli S88]
gi|218693551|ref|YP_002401218.1| S-adenosyl-methyltransferase MraW [Escherichia coli 55989]
gi|218703342|ref|YP_002410861.1| S-adenosyl-methyltransferase MraW [Escherichia coli UMN026]
gi|237704231|ref|ZP_04534712.1| S-adenosyl-methyltransferase MraW [Escherichia sp. 3_2_53FAA]
gi|238899483|ref|YP_002925279.1| S-adenosyl-methyltransferase MraW [Escherichia coli BW2952]
gi|251783645|ref|YP_002997949.1| 16S rRNA m[4]C1402 methyltransferase [Escherichia coli BL21(DE3)]
gi|253774888|ref|YP_003037719.1| S-adenosyl-methyltransferase MraW [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160204|ref|YP_003043312.1| S-adenosyl-methyltransferase MraW [Escherichia coli B str. REL606]
gi|254287007|ref|YP_003052755.1| S-adenosyl-methyltransferase [Escherichia coli BL21(DE3)]
gi|254791219|ref|YP_003076056.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
TW14359]
gi|260842318|ref|YP_003220096.1| S-adenosyl-dependent methyltransferase [Escherichia coli O103:H2
str. 12009]
gi|260853295|ref|YP_003227186.1| S-adenosyl-methyltransferase MraW [Escherichia coli O26:H11 str.
11368]
gi|260866235|ref|YP_003232637.1| S-adenosyl-dependent methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|261226839|ref|ZP_05941120.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255243|ref|ZP_05947776.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
FRIK966]
gi|291280907|ref|YP_003497725.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli O55:H7 str. CB9615]
gi|293403154|ref|ZP_06647251.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli FVEC1412]
gi|293408175|ref|ZP_06652015.1| S-adenosyl-methyltransferase MraW [Escherichia coli B354]
gi|293417958|ref|ZP_06660580.1| S-adenosyl-methyltransferase MraW [Escherichia coli B185]
gi|293476742|ref|ZP_06665150.1| S-adenosyl-methyltransferase MraW [Escherichia coli B088]
gi|297516902|ref|ZP_06935288.1| S-adenosyl-methyltransferase MraW [Escherichia coli OP50]
gi|298378684|ref|ZP_06988568.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli FVEC1302]
gi|300816120|ref|ZP_07096343.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 107-1]
gi|300821913|ref|ZP_07102057.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 119-7]
gi|300900887|ref|ZP_07119024.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 198-1]
gi|300905491|ref|ZP_07123255.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 84-1]
gi|300919637|ref|ZP_07136128.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 115-1]
gi|300923135|ref|ZP_07139195.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 182-1]
gi|300931791|ref|ZP_07147091.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 187-1]
gi|300938477|ref|ZP_07153217.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 21-1]
gi|300949900|ref|ZP_07163863.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 116-1]
gi|300955948|ref|ZP_07168281.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 175-1]
gi|300984504|ref|ZP_07176996.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 200-1]
gi|301028563|ref|ZP_07191794.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 196-1]
gi|301303818|ref|ZP_07209938.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 124-1]
gi|301330140|ref|ZP_07222807.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 78-1]
gi|301646394|ref|ZP_07246276.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 146-1]
gi|306815320|ref|ZP_07449469.1| S-adenosyl-methyltransferase MraW [Escherichia coli NC101]
gi|307311467|ref|ZP_07591109.1| S-adenosyl-methyltransferase MraW [Escherichia coli W]
gi|309796072|ref|ZP_07690484.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 145-7]
gi|312970176|ref|ZP_07784358.1| S-adenosyl-methyltransferase MraW [Escherichia coli 1827-70]
gi|331661128|ref|ZP_08362060.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA206]
gi|331661456|ref|ZP_08362380.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA143]
gi|331666319|ref|ZP_08367200.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA271]
gi|331681467|ref|ZP_08382104.1| S-adenosyl-methyltransferase MraW [Escherichia coli H299]
gi|332281230|ref|ZP_08393643.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Shigella sp. D9]
gi|378714576|ref|YP_005279469.1| S-adenosyl-methyltransferase MraW [Escherichia coli KO11FL]
gi|386279129|ref|ZP_10056817.1| ribosomal RNA small subunit methyltransferase H [Escherichia sp.
4_1_40B]
gi|386597022|ref|YP_006093422.1| S-adenosyl-methyltransferase MraW [Escherichia coli DH1]
gi|386597832|ref|YP_006099338.1| S-adenosyl-methyltransferase MraW [Escherichia coli IHE3034]
gi|386607172|ref|YP_006113472.1| S-adenosyl-methyltransferase MraW [Escherichia coli UM146]
gi|386607388|ref|YP_006122874.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli W]
gi|386612245|ref|YP_006131911.1| S-adenosyl-methyltransferase MraW [Escherichia coli UMNK88]
gi|386617591|ref|YP_006137171.1| S-adenosyl-methyltransferase [Escherichia coli NA114]
gi|386698583|ref|YP_006162420.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli KO11FL]
gi|386703288|ref|YP_006167135.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli P12b]
gi|386707813|ref|YP_006171534.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli W]
gi|387505014|ref|YP_006157270.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|387610557|ref|YP_006113673.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli ETEC H10407]
gi|387619853|ref|YP_006127480.1| S-adenosyl-methyltransferase MraW [Escherichia coli DH1]
gi|387828145|ref|YP_003348082.1| S-adenosyl-methyltransferase [Escherichia coli SE15]
gi|388476203|ref|YP_488387.1| SAM-dependent methyltransferase [Escherichia coli str. K-12 substr.
W3110]
gi|404373396|ref|ZP_10978659.1| ribosomal RNA small subunit methyltransferase H [Escherichia sp.
1_1_43]
gi|407467540|ref|YP_006786018.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483744|ref|YP_006780893.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484284|ref|YP_006771830.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415777588|ref|ZP_11488787.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3431]
gi|415780997|ref|ZP_11490767.1| S-adenosyl-methyltransferase MraW [Escherichia coli EPECa14]
gi|415802058|ref|ZP_11499913.1| S-adenosyl-methyltransferase MraW [Escherichia coli E128010]
gi|415823889|ref|ZP_11512264.1| S-adenosyl-methyltransferase MraW [Escherichia coli OK1180]
gi|415832415|ref|ZP_11517868.1| S-adenosyl-methyltransferase MraW [Escherichia coli OK1357]
gi|415837660|ref|ZP_11519672.1| S-adenosyl-methyltransferase MraW [Escherichia coli RN587/1]
gi|415866908|ref|ZP_11539229.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 85-1]
gi|415873186|ref|ZP_11540464.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 79-10]
gi|416277195|ref|ZP_11644296.1| rRNA small subunit methyltransferase H [Shigella dysenteriae CDC
74-1112]
gi|416303695|ref|ZP_11653672.1| rRNA small subunit methyltransferase H [Shigella flexneri CDC
796-83]
gi|416309265|ref|ZP_11655718.1| rRNA small subunit methyltransferase H [Escherichia coli O157:H7
str. 1044]
gi|416319039|ref|ZP_11661591.1| rRNA small subunit methyltransferase H [Escherichia coli O157:H7
str. EC1212]
gi|416325926|ref|ZP_11666250.1| rRNA small subunit methyltransferase H [Escherichia coli O157:H7
str. 1125]
gi|416333794|ref|ZP_11670902.1| rRNA small subunit methyltransferase H [Escherichia coli WV_060327]
gi|416343018|ref|ZP_11677022.1| rRNA small subunit methyltransferase H [Escherichia coli EC4100B]
gi|416773297|ref|ZP_11873575.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H7 str.
G5101]
gi|416807770|ref|ZP_11888109.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O55:H7 str.
3256-97]
gi|416818918|ref|ZP_11892988.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O55:H7 str.
USDA 5905]
gi|416828254|ref|ZP_11897853.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H7 str.
LSU-61]
gi|416895429|ref|ZP_11925330.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_7v]
gi|417082323|ref|ZP_11950719.1| S-adenosyl-methyltransferase MraW [Escherichia coli cloneA_i1]
gi|417112158|ref|ZP_11964281.1| S-adenosyl-methyltransferase MraW [Escherichia coli 1.2741]
gi|417134140|ref|ZP_11978925.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5.0588]
gi|417142692|ref|ZP_11985073.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0259]
gi|417151454|ref|ZP_11990981.1| S-adenosyl-methyltransferase MraW [Escherichia coli 1.2264]
gi|417157488|ref|ZP_11995112.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0497]
gi|417159906|ref|ZP_11996825.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0741]
gi|417174439|ref|ZP_12004235.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.2608]
gi|417182007|ref|ZP_12008843.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93.0624]
gi|417190985|ref|ZP_12013581.1| S-adenosyl-methyltransferase MraW [Escherichia coli 4.0522]
gi|417216687|ref|ZP_12023359.1| S-adenosyl-methyltransferase MraW [Escherichia coli JB1-95]
gi|417223894|ref|ZP_12027185.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.154]
gi|417229832|ref|ZP_12031418.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5.0959]
gi|417247139|ref|ZP_12040240.1| S-adenosyl-methyltransferase MraW [Escherichia coli 9.0111]
gi|417253414|ref|ZP_12045173.1| S-adenosyl-methyltransferase MraW [Escherichia coli 4.0967]
gi|417263429|ref|ZP_12050838.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2.3916]
gi|417273475|ref|ZP_12060820.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2.4168]
gi|417277856|ref|ZP_12065176.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.2303]
gi|417284146|ref|ZP_12071441.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3003]
gi|417293682|ref|ZP_12080961.1| S-adenosyl-methyltransferase MraW [Escherichia coli B41]
gi|417295580|ref|ZP_12082833.1| S-adenosyl-methyltransferase MraW [Escherichia coli 900105 (10e)]
gi|417306609|ref|ZP_12093499.1| Ribosomal RNA small subunit methyltransferase H [Escherichia coli
PCN033]
gi|417584898|ref|ZP_12235682.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_C165-02]
gi|417589698|ref|ZP_12240419.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2534-86]
gi|417594924|ref|ZP_12245600.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3030-1]
gi|417600333|ref|ZP_12250922.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_94C]
gi|417606006|ref|ZP_12256540.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_DG131-3]
gi|417611092|ref|ZP_12261568.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_EH250]
gi|417616418|ref|ZP_12266858.1| S-adenosyl-methyltransferase MraW [Escherichia coli G58-1]
gi|417621306|ref|ZP_12271638.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_H.1.8]
gi|417632555|ref|ZP_12282779.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_S1191]
gi|417637341|ref|ZP_12287525.1| S-adenosyl-methyltransferase MraW [Escherichia coli TX1999]
gi|417660711|ref|ZP_12310292.1| rRNA small subunit methyltransferase H [Escherichia coli AA86]
gi|417670215|ref|ZP_12319744.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_O31]
gi|417680327|ref|ZP_12329717.1| S-adenosyl-methyltransferase MraW [Shigella boydii 3594-74]
gi|417687849|ref|ZP_12337102.1| S-adenosyl-methyltransferase MraW [Shigella boydii 5216-82]
gi|417705577|ref|ZP_12354652.1| S-adenosyl-methyltransferase MraW [Shigella flexneri VA-6]
gi|417710712|ref|ZP_12359722.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-272]
gi|417715377|ref|ZP_12364315.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-227]
gi|417803424|ref|ZP_12450464.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O104:H4 str.
LB226692]
gi|417831185|ref|ZP_12477713.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O104:H4 str.
01-09591]
gi|417864397|ref|ZP_12509443.1| rsmH [Escherichia coli O104:H4 str. C227-11]
gi|417944269|ref|ZP_12587513.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli XH140A]
gi|417976007|ref|ZP_12616803.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli XH001]
gi|418039634|ref|ZP_12677893.1| S-adenosyl-methyltransferase MraW [Escherichia coli W26]
gi|418300971|ref|ZP_12912765.1| S-adenosyl-methyltransferase MraW [Escherichia coli UMNF18]
gi|418942684|ref|ZP_13495941.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O157:H43
str. T22]
gi|418959530|ref|ZP_13511428.1| S-adenosyl-methyltransferase MraW [Escherichia coli J53]
gi|419048207|ref|ZP_13595132.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3A]
gi|419054365|ref|ZP_13601228.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3B]
gi|419054729|ref|ZP_13601590.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3C]
gi|419060286|ref|ZP_13607074.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3D]
gi|419066116|ref|ZP_13612807.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3E]
gi|419083837|ref|ZP_13629274.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4A]
gi|419089846|ref|ZP_13635190.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4B]
gi|419095533|ref|ZP_13640802.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4C]
gi|419101500|ref|ZP_13646681.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4D]
gi|419107126|ref|ZP_13652239.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4E]
gi|419112569|ref|ZP_13657614.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4F]
gi|419112904|ref|ZP_13657940.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5A]
gi|419118408|ref|ZP_13663396.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5B]
gi|419124037|ref|ZP_13668947.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5C]
gi|419140041|ref|ZP_13684825.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5E]
gi|419140448|ref|ZP_13685208.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6A]
gi|419146079|ref|ZP_13690777.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6B]
gi|419151919|ref|ZP_13696512.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6C]
gi|419157335|ref|ZP_13701867.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6D]
gi|419162341|ref|ZP_13706822.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6E]
gi|419168048|ref|ZP_13712449.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7A]
gi|419173382|ref|ZP_13717244.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7B]
gi|419179099|ref|ZP_13722726.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7C]
gi|419184556|ref|ZP_13728082.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7D]
gi|419189822|ref|ZP_13733295.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7E]
gi|419195035|ref|ZP_13738450.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8A]
gi|419201153|ref|ZP_13744385.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8B]
gi|419207024|ref|ZP_13750155.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8C]
gi|419213452|ref|ZP_13756487.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8D]
gi|419219291|ref|ZP_13762252.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8E]
gi|419224720|ref|ZP_13767616.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9A]
gi|419230581|ref|ZP_13773378.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9B]
gi|419235887|ref|ZP_13778641.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9C]
gi|419241474|ref|ZP_13784127.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9D]
gi|419246876|ref|ZP_13789496.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9E]
gi|419252713|ref|ZP_13795265.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10A]
gi|419258657|ref|ZP_13801121.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10B]
gi|419276020|ref|ZP_13818298.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10D]
gi|419276180|ref|ZP_13818453.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10E]
gi|419281709|ref|ZP_13823934.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10F]
gi|419292750|ref|ZP_13834828.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11A]
gi|419298070|ref|ZP_13840098.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11B]
gi|419298262|ref|ZP_13840288.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11C]
gi|419304584|ref|ZP_13846501.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11D]
gi|419309621|ref|ZP_13851501.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11E]
gi|419314922|ref|ZP_13856755.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12A]
gi|419320717|ref|ZP_13862463.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12B]
gi|419326895|ref|ZP_13868533.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12C]
gi|419332334|ref|ZP_13873902.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12D]
gi|419338089|ref|ZP_13879581.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12E]
gi|419343743|ref|ZP_13885130.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13A]
gi|419348165|ref|ZP_13889521.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13B]
gi|419353065|ref|ZP_13894354.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13C]
gi|419358411|ref|ZP_13899644.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13D]
gi|419368355|ref|ZP_13909489.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14A]
gi|419373510|ref|ZP_13914573.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14B]
gi|419378937|ref|ZP_13919921.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14C]
gi|419389382|ref|ZP_13930233.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14D]
gi|419389492|ref|ZP_13930336.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15A]
gi|419410389|ref|ZP_13951068.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15D]
gi|419410704|ref|ZP_13951381.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15E]
gi|419806330|ref|ZP_14331440.1| S-adenosyl-methyltransferase MraW [Escherichia coli AI27]
gi|419811547|ref|ZP_14336421.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O32:H37 str.
P4]
gi|419864719|ref|ZP_14387136.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O103:H25
str. CVM9340]
gi|419868555|ref|ZP_14390825.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|419877393|ref|ZP_14398985.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H11
str. CVM9534]
gi|419889299|ref|ZP_14409718.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|419897628|ref|ZP_14417210.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|419903488|ref|ZP_14422558.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|419905191|ref|ZP_14424159.1| hypothetical protein ECO10026_28504 [Escherichia coli O26:H11 str.
CVM10026]
gi|419912742|ref|ZP_14431189.1| S-adenosyl-methyltransferase MraW [Escherichia coli KD1]
gi|419929456|ref|ZP_14447129.1| S-adenosyl-methyltransferase MraW [Escherichia coli 541-1]
gi|419935310|ref|ZP_14452395.1| S-adenosyl-methyltransferase MraW [Escherichia coli 576-1]
gi|419951402|ref|ZP_14467595.1| S-adenosyl-methyltransferase MraW [Escherichia coli CUMT8]
gi|420087195|ref|ZP_14599166.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|420092526|ref|ZP_14604228.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|420103146|ref|ZP_14614059.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H11
str. CVM9455]
gi|420111751|ref|ZP_14621573.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H11
str. CVM9553]
gi|420115907|ref|ZP_14625384.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM10021]
gi|420120258|ref|ZP_14629468.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM10030]
gi|420128308|ref|ZP_14636867.1| S-adenosyl-methyltransferase MraW [Escherichia coli O26:H11 str.
CVM10224]
gi|420132218|ref|ZP_14640598.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|420267083|ref|ZP_14769494.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA22]
gi|420284673|ref|ZP_14786893.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW10246]
gi|420290103|ref|ZP_14792272.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW11039]
gi|420295824|ref|ZP_14797922.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW09109]
gi|420301462|ref|ZP_14803497.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW10119]
gi|420307318|ref|ZP_14809294.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1738]
gi|420312962|ref|ZP_14814877.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1734]
gi|420318558|ref|ZP_14820418.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2850-71]
gi|420323734|ref|ZP_14825525.1| S-adenosyl-methyltransferase MraW [Shigella flexneri CCH060]
gi|420329022|ref|ZP_14830740.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-1770]
gi|420350950|ref|ZP_14852153.1| S-adenosyl-methyltransferase MraW [Shigella boydii 4444-74]
gi|420383714|ref|ZP_14883107.1| S-adenosyl-methyltransferase MraW [Escherichia coli EPECa12]
gi|420389410|ref|ZP_14888684.1| S-adenosyl-methyltransferase MraW [Escherichia coli EPEC C342-62]
gi|421680803|ref|ZP_16120646.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 1485-80]
gi|421775216|ref|ZP_16211826.1| S-adenosyl-methyltransferase MraW [Escherichia coli AD30]
gi|421810227|ref|ZP_16246047.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0416]
gi|421816299|ref|ZP_16251872.1| S-adenosyl-methyltransferase MraW [Escherichia coli 10.0821]
gi|421821693|ref|ZP_16257138.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK920]
gi|421828444|ref|ZP_16263776.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA7]
gi|422333244|ref|ZP_16414255.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
4_1_47FAA]
gi|422354287|ref|ZP_16435029.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 117-3]
gi|422361029|ref|ZP_16441657.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 110-3]
gi|422368262|ref|ZP_16448675.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 16-3]
gi|422376423|ref|ZP_16456674.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 60-1]
gi|422750531|ref|ZP_16804441.1| S-adenosyl-methyltransferase MraW [Escherichia coli H252]
gi|422756418|ref|ZP_16810241.1| S-adenosyl-methyltransferase MraW [Escherichia coli H263]
gi|422761760|ref|ZP_16815518.1| S-adenosyl-methyltransferase MraW [Escherichia coli E1167]
gi|422768334|ref|ZP_16822059.1| S-adenosyl-methyltransferase MraW [Escherichia coli E1520]
gi|422772995|ref|ZP_16826681.1| S-adenosyl-methyltransferase MraW [Escherichia coli E482]
gi|422776721|ref|ZP_16830375.1| S-adenosyl-methyltransferase MraW [Escherichia coli H120]
gi|422783152|ref|ZP_16835936.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW10509]
gi|422788320|ref|ZP_16841057.1| S-adenosyl-methyltransferase MraW [Escherichia coli H489]
gi|422792732|ref|ZP_16845431.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA007]
gi|422802603|ref|ZP_16851096.1| S-adenosyl-methyltransferase MraW [Escherichia coli M863]
gi|422806694|ref|ZP_16855125.1| S-adenosyl-methyltransferase MraW [Escherichia fergusonii B253]
gi|422831323|ref|ZP_16879469.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
B093]
gi|422834375|ref|ZP_16882437.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
E101]
gi|422839936|ref|ZP_16887907.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
H397]
gi|422957577|ref|ZP_16969791.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
H494]
gi|422971514|ref|ZP_16974789.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
TA124]
gi|422990788|ref|ZP_16981559.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. C227-11]
gi|422992728|ref|ZP_16983492.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. C236-11]
gi|422997937|ref|ZP_16988693.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 09-7901]
gi|423006421|ref|ZP_16997165.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 04-8351]
gi|423008043|ref|ZP_16998781.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-3677]
gi|423022229|ref|ZP_17012932.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4404]
gi|423027384|ref|ZP_17018077.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4522]
gi|423033221|ref|ZP_17023905.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4623]
gi|423036087|ref|ZP_17026761.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041207|ref|ZP_17031874.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423047893|ref|ZP_17038550.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423056431|ref|ZP_17045236.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058442|ref|ZP_17047238.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423652445|ref|ZP_17627849.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA31]
gi|423700867|ref|ZP_17675326.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
H730]
gi|424074844|ref|ZP_17812236.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA505]
gi|424081092|ref|ZP_17817999.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA517]
gi|424087768|ref|ZP_17824070.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1996]
gi|424093977|ref|ZP_17829790.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1985]
gi|424100391|ref|ZP_17835600.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1990]
gi|424107214|ref|ZP_17841835.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93-001]
gi|424113189|ref|ZP_17847388.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA3]
gi|424119319|ref|ZP_17853078.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA5]
gi|424131541|ref|ZP_17864397.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA10]
gi|424144609|ref|ZP_17876417.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA15]
gi|424150755|ref|ZP_17882061.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA24]
gi|424260106|ref|ZP_17893042.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA25]
gi|424260792|ref|ZP_17893378.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA28]
gi|424417029|ref|ZP_17899149.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA32]
gi|424453153|ref|ZP_17904740.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA33]
gi|424459430|ref|ZP_17910440.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA39]
gi|424465893|ref|ZP_17916130.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA41]
gi|424472495|ref|ZP_17922207.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA42]
gi|424478464|ref|ZP_17927753.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW07945]
gi|424484489|ref|ZP_17933408.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW09098]
gi|424490581|ref|ZP_17939058.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW09195]
gi|424497702|ref|ZP_17945025.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4203]
gi|424503949|ref|ZP_17950774.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4196]
gi|424510190|ref|ZP_17956495.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW14313]
gi|424517772|ref|ZP_17962246.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW14301]
gi|424523601|ref|ZP_17967668.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4421]
gi|424535776|ref|ZP_17979084.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4013]
gi|424541665|ref|ZP_17984550.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4402]
gi|424547990|ref|ZP_17990252.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4439]
gi|424554280|ref|ZP_17996048.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4436]
gi|424560627|ref|ZP_18001953.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4437]
gi|424748206|ref|ZP_18176355.1| S-adenosyl-methyltransferase MraW [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424764751|ref|ZP_18192168.1| S-adenosyl-methyltransferase MraW [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424774688|ref|ZP_18201698.1| S-adenosyl-methyltransferase MraW [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424814998|ref|ZP_18240149.1| S-adenosyl-methyltransferase MraW [Escherichia fergusonii ECD227]
gi|425101560|ref|ZP_18504248.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5.2239]
gi|425107417|ref|ZP_18509702.1| S-adenosyl-methyltransferase MraW [Escherichia coli 6.0172]
gi|425113397|ref|ZP_18515253.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0566]
gi|425118149|ref|ZP_18519904.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0569]
gi|425123229|ref|ZP_18524844.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0586]
gi|425129254|ref|ZP_18530397.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.2524]
gi|425135597|ref|ZP_18536366.1| S-adenosyl-methyltransferase MraW [Escherichia coli 10.0833]
gi|425141543|ref|ZP_18541875.1| S-adenosyl-methyltransferase MraW [Escherichia coli 10.0869]
gi|425159896|ref|ZP_18559106.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA506]
gi|425165411|ref|ZP_18564254.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA507]
gi|425171697|ref|ZP_18570134.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA504]
gi|425177499|ref|ZP_18575586.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1999]
gi|425183723|ref|ZP_18581383.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1997]
gi|425196753|ref|ZP_18593445.1| S-adenosyl-methyltransferase MraW [Escherichia coli NE037]
gi|425209225|ref|ZP_18604997.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA4]
gi|425215264|ref|ZP_18610618.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA23]
gi|425221829|ref|ZP_18616724.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA49]
gi|425228083|ref|ZP_18622515.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA45]
gi|425234381|ref|ZP_18628375.1| S-adenosyl-methyltransferase MraW [Escherichia coli TT12B]
gi|425240356|ref|ZP_18634026.1| S-adenosyl-methyltransferase MraW [Escherichia coli MA6]
gi|425246436|ref|ZP_18639675.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5905]
gi|425252223|ref|ZP_18645142.1| S-adenosyl-methyltransferase MraW [Escherichia coli CB7326]
gi|425258559|ref|ZP_18650964.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC96038]
gi|425270788|ref|ZP_18662314.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW15901]
gi|425275947|ref|ZP_18667304.1| S-adenosyl-methyltransferase MraW [Escherichia coli ARS4.2123]
gi|425281413|ref|ZP_18672544.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW00353]
gi|425292054|ref|ZP_18682693.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA38]
gi|425303592|ref|ZP_18693408.1| S-adenosyl-methyltransferase MraW [Escherichia coli N1]
gi|425308837|ref|ZP_18698349.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1735]
gi|425314765|ref|ZP_18703883.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1736]
gi|425320841|ref|ZP_18709561.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1737]
gi|425327002|ref|ZP_18715274.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1846]
gi|425333190|ref|ZP_18720959.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1847]
gi|425351702|ref|ZP_18738123.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1850]
gi|425357689|ref|ZP_18743703.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1856]
gi|425363803|ref|ZP_18749405.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1862]
gi|425389090|ref|ZP_18772624.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1866]
gi|425389731|ref|ZP_18773226.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1868]
gi|425395856|ref|ZP_18778936.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1869]
gi|425408012|ref|ZP_18790204.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1870]
gi|425408388|ref|ZP_18790577.1| S-adenosyl-methyltransferase MraW [Escherichia coli NE098]
gi|425414657|ref|ZP_18796328.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK523]
gi|425420679|ref|ZP_18801923.1| S-adenosyl-methyltransferase MraW [Escherichia coli 0.1288]
gi|425425807|ref|ZP_18806892.1| S-adenosyl-methyltransferase MraW [Escherichia coli 0.1304]
gi|427803156|ref|ZP_18970223.1| putative apolipoprotein [Escherichia coli chi7122]
gi|427807758|ref|ZP_18974823.1| putative apolipoprotein [Escherichia coli]
gi|428944439|ref|ZP_19017131.1| S-adenosyl-methyltransferase MraW [Escherichia coli 88.1467]
gi|428950613|ref|ZP_19022794.1| S-adenosyl-methyltransferase MraW [Escherichia coli 88.1042]
gi|428956459|ref|ZP_19028207.1| S-adenosyl-methyltransferase MraW [Escherichia coli 89.0511]
gi|428962826|ref|ZP_19034047.1| S-adenosyl-methyltransferase MraW [Escherichia coli 90.0091]
gi|428974752|ref|ZP_19045034.1| S-adenosyl-methyltransferase MraW [Escherichia coli 90.0039]
gi|428975409|ref|ZP_19045620.1| S-adenosyl-methyltransferase MraW [Escherichia coli 90.2281]
gi|428981137|ref|ZP_19050908.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93.0055]
gi|428987414|ref|ZP_19056741.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93.0056]
gi|428993225|ref|ZP_19062169.1| S-adenosyl-methyltransferase MraW [Escherichia coli 94.0618]
gi|428999317|ref|ZP_19067867.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.0183]
gi|429005554|ref|ZP_19073524.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.1288]
gi|429011915|ref|ZP_19079204.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.0943]
gi|429018147|ref|ZP_19084964.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0428]
gi|429023797|ref|ZP_19090248.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0427]
gi|429030101|ref|ZP_19096010.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0939]
gi|429036254|ref|ZP_19101733.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0932]
gi|429042376|ref|ZP_19107414.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0107]
gi|429048057|ref|ZP_19112725.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0003]
gi|429053426|ref|ZP_19117947.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.1742]
gi|429059120|ref|ZP_19123290.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0007]
gi|429071121|ref|ZP_19134489.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0678]
gi|429076351|ref|ZP_19139581.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0713]
gi|429722286|ref|ZP_19257185.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774364|ref|ZP_19306368.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02030]
gi|429779624|ref|ZP_19311580.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429783679|ref|ZP_19315593.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02092]
gi|429789017|ref|ZP_19320893.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02093]
gi|429795247|ref|ZP_19327074.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02281]
gi|429801173|ref|ZP_19332952.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02318]
gi|429804805|ref|ZP_19336553.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02913]
gi|429809616|ref|ZP_19341319.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-03439]
gi|429815376|ref|ZP_19347036.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-04080]
gi|429820587|ref|ZP_19352202.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-03943]
gi|429823563|ref|ZP_19355120.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0109]
gi|429829934|ref|ZP_19360852.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0010]
gi|429906638|ref|ZP_19372608.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429910833|ref|ZP_19376790.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429916673|ref|ZP_19382614.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429921711|ref|ZP_19387633.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429927528|ref|ZP_19393435.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429931461|ref|ZP_19397357.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429938004|ref|ZP_19403885.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429938719|ref|ZP_19404593.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946360|ref|ZP_19412216.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949008|ref|ZP_19414856.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957275|ref|ZP_19423104.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432351718|ref|ZP_19595031.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE2]
gi|432356440|ref|ZP_19599688.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE4]
gi|432365939|ref|ZP_19609074.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE5]
gi|432368076|ref|ZP_19611184.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE10]
gi|432384637|ref|ZP_19627550.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE15]
gi|432385467|ref|ZP_19628369.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE16]
gi|432389979|ref|ZP_19632845.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE21]
gi|432395927|ref|ZP_19638720.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE25]
gi|432400164|ref|ZP_19642925.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE26]
gi|432415039|ref|ZP_19657675.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE44]
gi|432420197|ref|ZP_19662758.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE178]
gi|432429195|ref|ZP_19671661.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE181]
gi|432439416|ref|ZP_19681781.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE189]
gi|432444539|ref|ZP_19686850.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE191]
gi|432452838|ref|ZP_19695085.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE193]
gi|432463937|ref|ZP_19706057.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE204]
gi|432469004|ref|ZP_19711067.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE205]
gi|432469413|ref|ZP_19711469.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE206]
gi|432474081|ref|ZP_19716098.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE208]
gi|432479409|ref|ZP_19721375.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE210]
gi|432483726|ref|ZP_19725655.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE212]
gi|432492388|ref|ZP_19734233.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE213]
gi|432498377|ref|ZP_19740158.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE216]
gi|432512277|ref|ZP_19749524.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE224]
gi|432520733|ref|ZP_19757904.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE228]
gi|432529382|ref|ZP_19766441.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE233]
gi|432532295|ref|ZP_19769304.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE234]
gi|432540907|ref|ZP_19777787.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE235]
gi|432546402|ref|ZP_19783214.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE236]
gi|432546807|ref|ZP_19783607.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE237]
gi|432552116|ref|ZP_19788850.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE47]
gi|432557104|ref|ZP_19793800.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE49]
gi|432562005|ref|ZP_19798638.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE51]
gi|432571975|ref|ZP_19808469.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE55]
gi|432578797|ref|ZP_19815233.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE56]
gi|432581273|ref|ZP_19817691.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE57]
gi|432586411|ref|ZP_19822784.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE58]
gi|432595980|ref|ZP_19832270.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE62]
gi|432600595|ref|ZP_19836851.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE66]
gi|432609787|ref|ZP_19845963.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE72]
gi|432614880|ref|ZP_19851017.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE75]
gi|432625051|ref|ZP_19861050.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE76]
gi|432625643|ref|ZP_19861632.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE77]
gi|432634530|ref|ZP_19870437.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE80]
gi|432635401|ref|ZP_19871291.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE81]
gi|432644121|ref|ZP_19879935.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE83]
gi|432644490|ref|ZP_19880297.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE86]
gi|432654124|ref|ZP_19889846.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE93]
gi|432659351|ref|ZP_19895016.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE111]
gi|432664241|ref|ZP_19899843.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE116]
gi|432668906|ref|ZP_19904461.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE119]
gi|432677662|ref|ZP_19913093.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE142]
gi|432678489|ref|ZP_19913894.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE143]
gi|432683964|ref|ZP_19919287.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE156]
gi|432689868|ref|ZP_19925122.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE161]
gi|432692761|ref|ZP_19927983.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE162]
gi|432697387|ref|ZP_19932563.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE169]
gi|432702627|ref|ZP_19937759.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE171]
gi|432708919|ref|ZP_19943990.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE6]
gi|432711768|ref|ZP_19946822.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE8]
gi|432717096|ref|ZP_19952101.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE9]
gi|432721678|ref|ZP_19956607.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE17]
gi|432726088|ref|ZP_19960977.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE18]
gi|432735548|ref|ZP_19970340.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE42]
gi|432739856|ref|ZP_19974579.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE23]
gi|432744006|ref|ZP_19978715.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE43]
gi|432752911|ref|ZP_19987482.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE29]
gi|432757596|ref|ZP_19992130.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE22]
gi|432763367|ref|ZP_19997824.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE48]
gi|432773236|ref|ZP_20007538.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE54]
gi|432776965|ref|ZP_20011221.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE59]
gi|432790665|ref|ZP_20024786.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE65]
gi|432800401|ref|ZP_20034393.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE84]
gi|432808718|ref|ZP_20042628.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE91]
gi|432812231|ref|ZP_20046081.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE101]
gi|432818304|ref|ZP_20052031.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE115]
gi|432819432|ref|ZP_20053147.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE118]
gi|432825561|ref|ZP_20059218.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE123]
gi|432830060|ref|ZP_20063670.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE135]
gi|432833185|ref|ZP_20066734.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE136]
gi|432837644|ref|ZP_20071140.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE140]
gi|432858387|ref|ZP_20084883.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE146]
gi|432872627|ref|ZP_20092443.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE147]
gi|432879340|ref|ZP_20096367.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE154]
gi|432883735|ref|ZP_20098977.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE158]
gi|432892653|ref|ZP_20104820.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE165]
gi|432896752|ref|ZP_20107846.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE192]
gi|432902382|ref|ZP_20112130.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE194]
gi|432909643|ref|ZP_20116916.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE190]
gi|432916996|ref|ZP_20121735.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE173]
gi|432924226|ref|ZP_20126645.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE175]
gi|432932345|ref|ZP_20132247.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE184]
gi|432941776|ref|ZP_20139274.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE183]
gi|432944649|ref|ZP_20141059.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE196]
gi|432952741|ref|ZP_20145484.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE197]
gi|432966226|ref|ZP_20155146.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE203]
gi|432970218|ref|ZP_20159100.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE207]
gi|432979462|ref|ZP_20168252.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE211]
gi|432983804|ref|ZP_20172546.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE215]
gi|432989022|ref|ZP_20177695.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE217]
gi|433003622|ref|ZP_20192061.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE227]
gi|433010830|ref|ZP_20199235.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE229]
gi|433012254|ref|ZP_20200643.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE104]
gi|433017058|ref|ZP_20205334.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE105]
gi|433026449|ref|ZP_20214403.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE106]
gi|433027099|ref|ZP_20214979.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE109]
gi|433031489|ref|ZP_20219315.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE112]
gi|433037007|ref|ZP_20224635.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE113]
gi|433041579|ref|ZP_20229118.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE117]
gi|433046111|ref|ZP_20233556.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE120]
gi|433051299|ref|ZP_20238548.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE122]
gi|433066205|ref|ZP_20253060.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE128]
gi|433075929|ref|ZP_20262541.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE129]
gi|433076239|ref|ZP_20262819.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE131]
gi|433080986|ref|ZP_20267466.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE133]
gi|433090432|ref|ZP_20276745.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE138]
gi|433094957|ref|ZP_20281184.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE139]
gi|433099619|ref|ZP_20285741.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE145]
gi|433104260|ref|ZP_20290286.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE148]
gi|433109257|ref|ZP_20295141.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE150]
gi|433123241|ref|ZP_20308876.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE157]
gi|433128370|ref|ZP_20313859.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE163]
gi|433133271|ref|ZP_20318658.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE166]
gi|433142579|ref|ZP_20327765.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE168]
gi|433152216|ref|ZP_20337191.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE176]
gi|433157022|ref|ZP_20341905.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE177]
gi|433161863|ref|ZP_20346633.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE179]
gi|433166798|ref|ZP_20351484.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE180]
gi|433171850|ref|ZP_20356420.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE232]
gi|433176445|ref|ZP_20360925.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE82]
gi|433186433|ref|ZP_20370641.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE85]
gi|433191403|ref|ZP_20375470.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE88]
gi|433191874|ref|ZP_20375907.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE90]
gi|433201525|ref|ZP_20385342.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE95]
gi|433324964|ref|ZP_20402181.1| S-adenosyl-methyltransferase MraW [Escherichia coli J96]
gi|442594100|ref|ZP_21012023.1| rRNA small subunit methyltransferase H [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442597904|ref|ZP_21015682.1| rRNA small subunit methyltransferase H [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443616097|ref|YP_007379953.1| S-adenosyl-methyltransferase MraW [Escherichia coli APEC O78]
gi|444922278|ref|ZP_21242042.1| S-adenosyl-methyltransferase MraW [Escherichia coli 09BKT078844]
gi|444928596|ref|ZP_21247768.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0814]
gi|444933994|ref|ZP_21252959.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0815]
gi|444939564|ref|ZP_21258234.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0816]
gi|444945156|ref|ZP_21263594.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0839]
gi|444950687|ref|ZP_21268931.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0848]
gi|444956160|ref|ZP_21274185.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1753]
gi|444961455|ref|ZP_21279232.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1775]
gi|444967223|ref|ZP_21284709.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1793]
gi|444972728|ref|ZP_21290032.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1805]
gi|444978239|ref|ZP_21295247.1| S-adenosyl-methyltransferase MraW [Escherichia coli ATCC 700728]
gi|444983560|ref|ZP_21300436.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA11]
gi|444988802|ref|ZP_21305553.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA19]
gi|444999298|ref|ZP_21315780.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA13]
gi|444999628|ref|ZP_21316103.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA2]
gi|445005090|ref|ZP_21321444.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA47]
gi|445010271|ref|ZP_21326477.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA48]
gi|445016033|ref|ZP_21332094.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA8]
gi|445021506|ref|ZP_21337440.1| S-adenosyl-methyltransferase MraW [Escherichia coli 7.1982]
gi|445026747|ref|ZP_21342536.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1781]
gi|445032223|ref|ZP_21347861.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1762]
gi|445037917|ref|ZP_21353400.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA35]
gi|445043090|ref|ZP_21358439.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.4880]
gi|445048742|ref|ZP_21363925.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.0083]
gi|445054360|ref|ZP_21369322.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0670]
gi|450184956|ref|ZP_21888866.1| S-adenosyl-methyltransferase MraW [Escherichia coli SEPT362]
gi|450208944|ref|ZP_21893872.1| S-adenosyl-methyltransferase MraW [Escherichia coli O08]
gi|450238002|ref|ZP_21898778.1| S-adenosyl-methyltransferase MraW [Escherichia coli S17]
gi|452970070|ref|ZP_21968297.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O157:H7 str.
EC4009]
gi|42559423|sp|P60391.1|RSMH_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42560200|sp|P60390.1|RSMH_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|88909217|sp|Q326F3.1|RSMH_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|122425027|sp|Q1RGB3.1|RSMH_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|122958600|sp|Q0TLQ7.1|RSMH_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826583|sp|B2U287.1|RSMH_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446391|sp|A7ZHH3.1|RSMH_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446421|sp|B7LFV2.1|RSMH_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446425|sp|B5YZB8.1|RSMH_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446445|sp|B7M125.1|RSMH_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446449|sp|C5W331.1|RSMH_ECOBD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446457|sp|C6UM45.1|RSMH_ECOBR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446461|sp|C4ZQ04.1|RSMH_ECOBW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446465|sp|B1XC59.1|RSMH_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446468|sp|A7ZW34.1|RSMH_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446964|sp|B1IR96.1|RSMH_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446972|sp|B7N7V5.1|RSMH_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446978|sp|B6HZ59.1|RSMH_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446983|sp|B1LG19.1|RSMH_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263447462|sp|B7MAK5.1|RSMH_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263447500|sp|B7LWH0.1|RSMH_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263447897|sp|A1A7C7.2|RSMH_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|12512785|gb|AAG54386.1|AE005185_3 putative apolipoprotein [Escherichia coli O157:H7 str. EDL933]
gi|40850|emb|CAA38859.1| unnamed protein product [Escherichia coli]
gi|42318|emb|CAA36283.1| unnamed protein product [Escherichia coli str. K-12 substr. W3110]
gi|1786270|gb|AAC73193.1| 16S rRNA m(4)C1402 methyltransferase, SAM-dependent [Escherichia
coli str. K-12 substr. MG1655]
gi|13359542|dbj|BAB33509.1| putative apolipoprotein [Escherichia coli O157:H7 str. Sakai]
gi|21321963|dbj|BAB96650.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli str. K12 substr. W3110]
gi|81244097|gb|ABB64805.1| putative apolipoprotein [Shigella boydii Sb227]
gi|91070720|gb|ABE05601.1| S-adenosyl-dependent methyltransferase MraW [Escherichia coli
UTI89]
gi|110341887|gb|ABG68124.1| S-adenosyl-methyltransferase MraW [Escherichia coli 536]
gi|157065233|gb|ABV04488.1| S-adenosyl-methyltransferase MraW [Escherichia coli HS]
gi|157076805|gb|ABV16513.1| S-adenosyl-methyltransferase MraW [Escherichia coli E24377A]
gi|169756490|gb|ACA79189.1| S-adenosyl-methyltransferase MraW [Escherichia coli ATCC 8739]
gi|169887556|gb|ACB01263.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli str. K-12 substr. DH10B]
gi|170517429|gb|ACB15607.1| S-adenosyl-methyltransferase MraW [Escherichia coli SMS-3-5]
gi|187428388|gb|ACD07662.1| S-adenosyl-methyltransferase MraW [Shigella boydii CDC 3083-94]
gi|187767771|gb|EDU31615.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4196]
gi|188014531|gb|EDU52653.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4113]
gi|188489430|gb|EDU64533.1| S-adenosyl-methyltransferase MraW [Escherichia coli 53638]
gi|189000502|gb|EDU69488.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4076]
gi|189356993|gb|EDU75412.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4401]
gi|189359899|gb|EDU78318.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4486]
gi|189365898|gb|EDU84314.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4501]
gi|189370778|gb|EDU89194.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC869]
gi|189376342|gb|EDU94758.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC508]
gi|190902183|gb|EDV61925.1| S-adenosyl-methyltransferase MraW [Escherichia coli B7A]
gi|190905079|gb|EDV64736.1| S-adenosyl-methyltransferase MraW [Escherichia coli F11]
gi|192926484|gb|EDV81117.1| S-adenosyl-methyltransferase MraW [Escherichia coli E22]
gi|192955859|gb|EDV86329.1| S-adenosyl-methyltransferase MraW [Escherichia coli E110019]
gi|194412603|gb|EDX28900.1| S-adenosyl-methyltransferase MraW [Escherichia coli B171]
gi|194421677|gb|EDX37687.1| S-adenosyl-methyltransferase MraW [Escherichia coli 101-1]
gi|208727474|gb|EDZ77075.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4206]
gi|208733889|gb|EDZ82576.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4045]
gi|208741941|gb|EDZ89623.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4042]
gi|209161803|gb|ACI39236.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
EC4115]
gi|209746626|gb|ACI71620.1| putative apolipoprotein [Escherichia coli]
gi|209746628|gb|ACI71621.1| putative apolipoprotein [Escherichia coli]
gi|209746630|gb|ACI71622.1| putative apolipoprotein [Escherichia coli]
gi|209746632|gb|ACI71623.1| putative apolipoprotein [Escherichia coli]
gi|209910534|dbj|BAG75608.1| S-adenosyl-methyltransferase [Escherichia coli SE11]
gi|217320902|gb|EEC29326.1| S-adenosyl-methyltransferase MraW [Escherichia coli O157:H7 str.
TW14588]
gi|218350283|emb|CAU95966.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli 55989]
gi|218355080|emb|CAQ87687.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia fergusonii ATCC 35469]
gi|218359433|emb|CAQ96971.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli IAI1]
gi|218363791|emb|CAR01451.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli S88]
gi|218430439|emb|CAR11305.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli UMN026]
gi|226840603|gb|EEH72605.1| ribosomal RNA small subunit methyltransferase H [Escherichia sp.
1_1_43]
gi|226902143|gb|EEH88402.1| S-adenosyl-methyltransferase MraW [Escherichia sp. 3_2_53FAA]
gi|238863507|gb|ACR65505.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli BW2952]
gi|242375918|emb|CAQ30599.1| 16S rRNA m[4]C1402 methyltransferase [Escherichia coli BL21(DE3)]
gi|253325932|gb|ACT30534.1| S-adenosyl-methyltransferase MraW [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972105|gb|ACT37776.1| S-adenosyl-methyltransferase [Escherichia coli B str. REL606]
gi|253976314|gb|ACT41984.1| S-adenosyl-methyltransferase [Escherichia coli BL21(DE3)]
gi|254590619|gb|ACT69980.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli O157:H7 str. TW14359]
gi|257751944|dbj|BAI23446.1| S-adenosyl-dependent methyltransferase [Escherichia coli O26:H11
str. 11368]
gi|257757465|dbj|BAI28962.1| S-adenosyl-dependent methyltransferase [Escherichia coli O103:H2
str. 12009]
gi|257762591|dbj|BAI34086.1| S-adenosyl-dependent methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|260450711|gb|ACX41133.1| S-adenosyl-methyltransferase MraW [Escherichia coli DH1]
gi|281177302|dbj|BAI53632.1| S-adenosyl-methyltransferase [Escherichia coli SE15]
gi|290760780|gb|ADD54741.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli O55:H7 str. CB9615]
gi|291321195|gb|EFE60637.1| S-adenosyl-methyltransferase MraW [Escherichia coli B088]
gi|291430069|gb|EFF03083.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli FVEC1412]
gi|291430676|gb|EFF03674.1| S-adenosyl-methyltransferase MraW [Escherichia coli B185]
gi|291472426|gb|EFF14908.1| S-adenosyl-methyltransferase MraW [Escherichia coli B354]
gi|294492092|gb|ADE90848.1| S-adenosyl-methyltransferase MraW [Escherichia coli IHE3034]
gi|298281018|gb|EFI22519.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli FVEC1302]
gi|299878407|gb|EFI86618.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 196-1]
gi|300306673|gb|EFJ61193.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 200-1]
gi|300317168|gb|EFJ66952.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 175-1]
gi|300355651|gb|EFJ71521.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 198-1]
gi|300402641|gb|EFJ86179.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 84-1]
gi|300413277|gb|EFJ96587.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 115-1]
gi|300420590|gb|EFK03901.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 182-1]
gi|300450732|gb|EFK14352.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 116-1]
gi|300456546|gb|EFK20039.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 21-1]
gi|300460451|gb|EFK23944.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 187-1]
gi|300525513|gb|EFK46582.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 119-7]
gi|300531327|gb|EFK52389.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 107-1]
gi|300840945|gb|EFK68705.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 124-1]
gi|300843845|gb|EFK71605.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 78-1]
gi|301075364|gb|EFK90170.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 146-1]
gi|305850982|gb|EFM51437.1| S-adenosyl-methyltransferase MraW [Escherichia coli NC101]
gi|306908446|gb|EFN38944.1| S-adenosyl-methyltransferase MraW [Escherichia coli W]
gi|307629656|gb|ADN73960.1| S-adenosyl-methyltransferase MraW [Escherichia coli UM146]
gi|308120314|gb|EFO57576.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 145-7]
gi|309700293|emb|CBI99581.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli ETEC H10407]
gi|310337674|gb|EFQ02785.1| S-adenosyl-methyltransferase MraW [Escherichia coli 1827-70]
gi|315059305|gb|ADT73632.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli W]
gi|315134776|dbj|BAJ41935.1| S-adenosyl-methyltransferase MraW [Escherichia coli DH1]
gi|315253156|gb|EFU33124.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 85-1]
gi|315285172|gb|EFU44617.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 110-3]
gi|315300017|gb|EFU59255.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 16-3]
gi|315616139|gb|EFU96758.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3431]
gi|320172827|gb|EFW48059.1| rRNA small subunit methyltransferase H [Shigella dysenteriae CDC
74-1112]
gi|320183631|gb|EFW58474.1| rRNA small subunit methyltransferase H [Shigella flexneri CDC
796-83]
gi|320190395|gb|EFW65045.1| rRNA small subunit methyltransferase H [Escherichia coli O157:H7
str. EC1212]
gi|320197467|gb|EFW72081.1| rRNA small subunit methyltransferase H [Escherichia coli WV_060327]
gi|320200399|gb|EFW74985.1| rRNA small subunit methyltransferase H [Escherichia coli EC4100B]
gi|320642121|gb|EFX11472.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H7 str.
G5101]
gi|320658207|gb|EFX25936.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320663516|gb|EFX30800.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320668828|gb|EFX35623.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H7 str.
LSU-61]
gi|323157851|gb|EFZ43954.1| S-adenosyl-methyltransferase MraW [Escherichia coli EPECa14]
gi|323160120|gb|EFZ46081.1| S-adenosyl-methyltransferase MraW [Escherichia coli E128010]
gi|323176390|gb|EFZ61982.1| S-adenosyl-methyltransferase MraW [Escherichia coli OK1180]
gi|323181779|gb|EFZ67192.1| S-adenosyl-methyltransferase MraW [Escherichia coli OK1357]
gi|323190236|gb|EFZ75512.1| S-adenosyl-methyltransferase MraW [Escherichia coli RN587/1]
gi|323380137|gb|ADX52405.1| S-adenosyl-methyltransferase MraW [Escherichia coli KO11FL]
gi|323935134|gb|EGB31501.1| S-adenosyl-methyltransferase MraW [Escherichia coli E1520]
gi|323939878|gb|EGB36078.1| S-adenosyl-methyltransferase MraW [Escherichia coli E482]
gi|323945711|gb|EGB41759.1| S-adenosyl-methyltransferase MraW [Escherichia coli H120]
gi|323950922|gb|EGB46799.1| S-adenosyl-methyltransferase MraW [Escherichia coli H252]
gi|323955280|gb|EGB51053.1| S-adenosyl-methyltransferase MraW [Escherichia coli H263]
gi|323960028|gb|EGB55674.1| S-adenosyl-methyltransferase MraW [Escherichia coli H489]
gi|323964822|gb|EGB60289.1| S-adenosyl-methyltransferase MraW [Escherichia coli M863]
gi|323970754|gb|EGB66008.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA007]
gi|323975754|gb|EGB70850.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW10509]
gi|324012284|gb|EGB81503.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 60-1]
gi|324017757|gb|EGB86976.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 117-3]
gi|324112505|gb|EGC06482.1| S-adenosyl-methyltransferase MraW [Escherichia fergusonii B253]
gi|324118432|gb|EGC12326.1| S-adenosyl-methyltransferase MraW [Escherichia coli E1167]
gi|325496018|gb|EGC93877.1| S-adenosyl-methyltransferase MraW [Escherichia fergusonii ECD227]
gi|326345198|gb|EGD68941.1| rRNA small subunit methyltransferase H [Escherichia coli O157:H7
str. 1125]
gi|326346948|gb|EGD70682.1| rRNA small subunit methyltransferase H [Escherichia coli O157:H7
str. 1044]
gi|327255060|gb|EGE66663.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_7v]
gi|330909929|gb|EGH38439.1| rRNA small subunit methyltransferase H [Escherichia coli AA86]
gi|331052170|gb|EGI24209.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA206]
gi|331061371|gb|EGI33334.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA143]
gi|331066530|gb|EGI38407.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA271]
gi|331081688|gb|EGI52849.1| S-adenosyl-methyltransferase MraW [Escherichia coli H299]
gi|332095373|gb|EGJ00396.1| S-adenosyl-methyltransferase MraW [Shigella boydii 5216-82]
gi|332098926|gb|EGJ03877.1| S-adenosyl-methyltransferase MraW [Shigella boydii 3594-74]
gi|332103582|gb|EGJ06928.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Shigella sp. D9]
gi|332341414|gb|AEE54748.1| S-adenosyl-methyltransferase MraW [Escherichia coli UMNK88]
gi|333010578|gb|EGK30011.1| S-adenosyl-methyltransferase MraW [Shigella flexneri VA-6]
gi|333011470|gb|EGK30884.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-272]
gi|333021712|gb|EGK40961.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-227]
gi|333968092|gb|AEG34897.1| S-adenosyl-methyltransferase [Escherichia coli NA114]
gi|338771815|gb|EGP26545.1| Ribosomal RNA small subunit methyltransferase H [Escherichia coli
PCN033]
gi|339413069|gb|AEJ54741.1| S-adenosyl-methyltransferase MraW [Escherichia coli UMNF18]
gi|340736054|gb|EGR65104.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O104:H4 str.
01-09591]
gi|340741970|gb|EGR76111.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O104:H4 str.
LB226692]
gi|341917686|gb|EGT67301.1| rsmH [Escherichia coli O104:H4 str. C227-11]
gi|342364097|gb|EGU28200.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli XH140A]
gi|342931223|gb|EGU99945.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 79-10]
gi|344194405|gb|EGV48479.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli XH001]
gi|345343081|gb|EGW75473.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_C165-02]
gi|345346056|gb|EGW78392.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2534-86]
gi|345354943|gb|EGW87158.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_94C]
gi|345363136|gb|EGW95279.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3030-1]
gi|345366860|gb|EGW98949.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_DG131-3]
gi|345367066|gb|EGW99153.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_EH250]
gi|345384167|gb|EGX14036.1| S-adenosyl-methyltransferase MraW [Escherichia coli G58-1]
gi|345387279|gb|EGX17103.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_H.1.8]
gi|345392073|gb|EGX21859.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_S1191]
gi|345395855|gb|EGX25590.1| S-adenosyl-methyltransferase MraW [Escherichia coli TX1999]
gi|354859287|gb|EHF19735.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 04-8351]
gi|354859774|gb|EHF20221.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. C227-11]
gi|354866471|gb|EHF26894.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. C236-11]
gi|354876805|gb|EHF37165.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 09-7901]
gi|354881814|gb|EHF42142.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4404]
gi|354884912|gb|EHF45223.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-3677]
gi|354886359|gb|EHF46646.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4522]
gi|354889875|gb|EHF50122.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4623]
gi|354902075|gb|EHF62197.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354905401|gb|EHF65484.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354907908|gb|EHF67964.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354910179|gb|EHF70207.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|354918380|gb|EHF78336.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|355353480|gb|EHG02645.1| S-adenosyl-methyltransferase MraW [Escherichia coli cloneA_i1]
gi|359330947|dbj|BAL37394.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli str. K-12 substr. MDS42]
gi|371597902|gb|EHN86720.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
H494]
gi|371598590|gb|EHN87387.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
TA124]
gi|371601895|gb|EHN90614.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
E101]
gi|371602274|gb|EHN90980.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
B093]
gi|371608420|gb|EHN96976.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
H397]
gi|373245759|gb|EHP65224.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
4_1_47FAA]
gi|374357008|gb|AEZ38715.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|375321995|gb|EHS67783.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O157:H43
str. T22]
gi|377887228|gb|EHU51705.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3A]
gi|377888755|gb|EHU53226.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3B]
gi|377915356|gb|EHU79465.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3C]
gi|377919635|gb|EHU83673.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3D]
gi|377921820|gb|EHU85815.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3E]
gi|377922271|gb|EHU86263.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4A]
gi|377925770|gb|EHU89710.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4B]
gi|377936056|gb|EHU99850.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4D]
gi|377936380|gb|EHV00174.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4C]
gi|377942607|gb|EHV06341.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4E]
gi|377953195|gb|EHV16776.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC4F]
gi|377966757|gb|EHV30167.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5A]
gi|377974639|gb|EHV37966.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5B]
gi|377978839|gb|EHV42118.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5E]
gi|377983756|gb|EHV46998.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC5C]
gi|378000965|gb|EHV64027.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6A]
gi|378002515|gb|EHV65566.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6B]
gi|378004331|gb|EHV67354.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6C]
gi|378016006|gb|EHV78896.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6D]
gi|378017489|gb|EHV80361.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC6E]
gi|378019330|gb|EHV82161.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7A]
gi|378028646|gb|EHV91263.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7C]
gi|378034183|gb|EHV96749.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7D]
gi|378038873|gb|EHW01378.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7B]
gi|378043270|gb|EHW05706.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC7E]
gi|378054549|gb|EHW16827.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8A]
gi|378058060|gb|EHW20280.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8B]
gi|378064566|gb|EHW26726.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8C]
gi|378070067|gb|EHW32150.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8D]
gi|378073797|gb|EHW35842.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC8E]
gi|378083440|gb|EHW45373.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9A]
gi|378084034|gb|EHW45963.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9B]
gi|378091720|gb|EHW53548.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9C]
gi|378096031|gb|EHW57810.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9D]
gi|378104367|gb|EHW66026.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC9E]
gi|378108817|gb|EHW70429.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10A]
gi|378110490|gb|EHW72085.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10D]
gi|378118679|gb|EHW80181.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10B]
gi|378123521|gb|EHW84939.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11A]
gi|378135100|gb|EHW96413.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10E]
gi|378137299|gb|EHW98582.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11B]
gi|378141309|gb|EHX02526.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC10F]
gi|378154238|gb|EHX15314.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11D]
gi|378158393|gb|EHX19418.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11C]
gi|378162262|gb|EHX23227.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC11E]
gi|378176419|gb|EHX37225.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12A]
gi|378176787|gb|EHX37592.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12B]
gi|378177795|gb|EHX38583.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12C]
gi|378191778|gb|EHX52353.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13A]
gi|378192506|gb|EHX53064.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12D]
gi|378194361|gb|EHX54876.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC12E]
gi|378205944|gb|EHX66351.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13B]
gi|378209018|gb|EHX69394.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13D]
gi|378209700|gb|EHX70068.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC13C]
gi|378223297|gb|EHX83521.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14A]
gi|378224423|gb|EHX84626.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14D]
gi|378228044|gb|EHX88211.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14B]
gi|378235437|gb|EHX95507.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC14C]
gi|378246340|gb|EHY06267.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15A]
gi|378249854|gb|EHY09763.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15D]
gi|378261714|gb|EHY21505.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15E]
gi|383101456|gb|AFG38965.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Escherichia coli P12b]
gi|383390110|gb|AFH15068.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli KO11FL]
gi|383403505|gb|AFH09748.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli W]
gi|383477498|gb|EID69418.1| S-adenosyl-methyltransferase MraW [Escherichia coli W26]
gi|384377751|gb|EIE35644.1| S-adenosyl-methyltransferase MraW [Escherichia coli J53]
gi|384470660|gb|EIE54761.1| S-adenosyl-methyltransferase MraW [Escherichia coli AI27]
gi|385155591|gb|EIF17593.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O32:H37 str.
P4]
gi|385713567|gb|EIG50498.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
H730]
gi|386123718|gb|EIG72307.1| ribosomal RNA small subunit methyltransferase H [Escherichia sp.
4_1_40B]
gi|386142942|gb|EIG84078.1| S-adenosyl-methyltransferase MraW [Escherichia coli 1.2741]
gi|386151994|gb|EIH03283.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5.0588]
gi|386154717|gb|EIH11075.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0259]
gi|386159645|gb|EIH21459.1| S-adenosyl-methyltransferase MraW [Escherichia coli 1.2264]
gi|386166238|gb|EIH32758.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0497]
gi|386174397|gb|EIH46390.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0741]
gi|386177131|gb|EIH54610.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.2608]
gi|386184996|gb|EIH67732.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93.0624]
gi|386191957|gb|EIH80698.1| S-adenosyl-methyltransferase MraW [Escherichia coli 4.0522]
gi|386193549|gb|EIH87833.1| S-adenosyl-methyltransferase MraW [Escherichia coli JB1-95]
gi|386198942|gb|EIH97933.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.154]
gi|386206322|gb|EII10828.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5.0959]
gi|386209767|gb|EII20254.1| S-adenosyl-methyltransferase MraW [Escherichia coli 9.0111]
gi|386217345|gb|EII33834.1| S-adenosyl-methyltransferase MraW [Escherichia coli 4.0967]
gi|386222792|gb|EII45206.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2.3916]
gi|386233657|gb|EII65637.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2.4168]
gi|386239266|gb|EII76196.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.2303]
gi|386242355|gb|EII84090.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3003]
gi|386251870|gb|EIJ01562.1| S-adenosyl-methyltransferase MraW [Escherichia coli B41]
gi|386261199|gb|EIJ16667.1| S-adenosyl-methyltransferase MraW [Escherichia coli 900105 (10e)]
gi|388339059|gb|EIL05446.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O103:H25
str. CVM9340]
gi|388340203|gb|EIL06469.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H11
str. CVM9534]
gi|388344642|gb|EIL10473.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|388355043|gb|EIL19908.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|388358115|gb|EIL22603.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|388371023|gb|EIL34515.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|388381368|gb|EIL43935.1| hypothetical protein ECO10026_28504 [Escherichia coli O26:H11 str.
CVM10026]
gi|388390642|gb|EIL52118.1| S-adenosyl-methyltransferase MraW [Escherichia coli KD1]
gi|388403250|gb|EIL63785.1| S-adenosyl-methyltransferase MraW [Escherichia coli 541-1]
gi|388405048|gb|EIL65487.1| S-adenosyl-methyltransferase MraW [Escherichia coli 576-1]
gi|388414687|gb|EIL74636.1| S-adenosyl-methyltransferase MraW [Escherichia coli CUMT8]
gi|390651600|gb|EIN29871.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1996]
gi|390654157|gb|EIN32210.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA517]
gi|390654453|gb|EIN32499.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA505]
gi|390670912|gb|EIN47400.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93-001]
gi|390674836|gb|EIN51001.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1990]
gi|390676305|gb|EIN52411.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1985]
gi|390689952|gb|EIN64854.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA3]
gi|390694710|gb|EIN69268.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA5]
gi|390709531|gb|EIN82613.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA10]
gi|390711945|gb|EIN84903.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA15]
gi|390716734|gb|EIN89529.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA25]
gi|390721472|gb|EIN94166.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA22]
gi|390735053|gb|EIO06482.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA24]
gi|390738290|gb|EIO09508.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA28]
gi|390753388|gb|EIO23111.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA31]
gi|390753598|gb|EIO23275.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA32]
gi|390758084|gb|EIO27552.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA33]
gi|390777221|gb|EIO45065.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA41]
gi|390781254|gb|EIO48938.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA42]
gi|390788379|gb|EIO55846.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA39]
gi|390796461|gb|EIO63737.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW10246]
gi|390802829|gb|EIO69858.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW11039]
gi|390812298|gb|EIO78981.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW07945]
gi|390812622|gb|EIO79298.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW09109]
gi|390820055|gb|EIO86361.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW10119]
gi|390825008|gb|EIO90957.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW09098]
gi|390838053|gb|EIP02371.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4203]
gi|390841136|gb|EIP05107.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4196]
gi|390845369|gb|EIP09036.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW09195]
gi|390856709|gb|EIP19280.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW14301]
gi|390861420|gb|EIP23668.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4421]
gi|390862876|gb|EIP25044.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW14313]
gi|390877714|gb|EIP38609.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4013]
gi|390887384|gb|EIP47360.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4402]
gi|390888971|gb|EIP48753.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4439]
gi|390896391|gb|EIP55781.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4436]
gi|390904424|gb|EIP63420.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1738]
gi|390912389|gb|EIP71041.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC4437]
gi|390912814|gb|EIP71460.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1734]
gi|391255401|gb|EIQ14549.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2850-71]
gi|391258011|gb|EIQ17118.1| S-adenosyl-methyltransferase MraW [Shigella flexneri CCH060]
gi|391261860|gb|EIQ20905.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-1770]
gi|391289784|gb|EIQ48268.1| S-adenosyl-methyltransferase MraW [Shigella boydii 4444-74]
gi|391310643|gb|EIQ68295.1| S-adenosyl-methyltransferase MraW [Escherichia coli EPECa12]
gi|391315643|gb|EIQ73167.1| S-adenosyl-methyltransferase MraW [Escherichia coli EPEC C342-62]
gi|394386098|gb|EJE63612.1| S-adenosyl-methyltransferase MraW [Escherichia coli O26:H11 str.
CVM10224]
gi|394393445|gb|EJE70130.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|394397935|gb|EJE74161.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H11
str. CVM9553]
gi|394400544|gb|EJE76458.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|394405090|gb|EJE80358.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM10021]
gi|394408969|gb|EJE83560.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O111:H11
str. CVM9455]
gi|394429319|gb|EJF01752.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM10030]
gi|394430224|gb|EJF02571.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|397782670|gb|EJK93538.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_O31]
gi|404342305|gb|EJZ68694.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 1485-80]
gi|406779446|gb|AFS58870.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056041|gb|AFS76092.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407063575|gb|AFS84622.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408073570|gb|EKH07879.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA7]
gi|408077307|gb|EKH11515.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK920]
gi|408091924|gb|EKH25123.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA506]
gi|408097664|gb|EKH30547.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA507]
gi|408103845|gb|EKH36174.1| S-adenosyl-methyltransferase MraW [Escherichia coli FDA504]
gi|408111274|gb|EKH43025.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1999]
gi|408117381|gb|EKH48566.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK1997]
gi|408131438|gb|EKH61480.1| S-adenosyl-methyltransferase MraW [Escherichia coli NE037]
gi|408142257|gb|EKH71638.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA4]
gi|408150915|gb|EKH79433.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA23]
gi|408154711|gb|EKH83042.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA49]
gi|408159707|gb|EKH87759.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA45]
gi|408167969|gb|EKH95422.1| S-adenosyl-methyltransferase MraW [Escherichia coli TT12B]
gi|408174071|gb|EKI01067.1| S-adenosyl-methyltransferase MraW [Escherichia coli MA6]
gi|408175630|gb|EKI02528.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5905]
gi|408187942|gb|EKI13831.1| S-adenosyl-methyltransferase MraW [Escherichia coli CB7326]
gi|408193996|gb|EKI19496.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC96038]
gi|408200925|gb|EKI26100.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW15901]
gi|408206849|gb|EKI31615.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW00353]
gi|408207734|gb|EKI32447.1| S-adenosyl-methyltransferase MraW [Escherichia coli ARS4.2123]
gi|408232875|gb|EKI56040.1| S-adenosyl-methyltransferase MraW [Escherichia coli N1]
gi|408234614|gb|EKI57624.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA38]
gi|408240909|gb|EKI63560.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1735]
gi|408250399|gb|EKI72259.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1736]
gi|408254564|gb|EKI76067.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1737]
gi|408260868|gb|EKI81917.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1846]
gi|408269477|gb|EKI89722.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1847]
gi|408286275|gb|EKJ05203.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1850]
gi|408289495|gb|EKJ08253.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1856]
gi|408301770|gb|EKJ19331.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1862]
gi|408303198|gb|EKJ20664.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1866]
gi|408319647|gb|EKJ35766.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1868]
gi|408320197|gb|EKJ36300.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1870]
gi|408332438|gb|EKJ47473.1| S-adenosyl-methyltransferase MraW [Escherichia coli EC1869]
gi|408338395|gb|EKJ53043.1| S-adenosyl-methyltransferase MraW [Escherichia coli NE098]
gi|408348479|gb|EKJ62575.1| S-adenosyl-methyltransferase MraW [Escherichia coli 0.1288]
gi|408351279|gb|EKJ65070.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK523]
gi|408353607|gb|EKJ67102.1| S-adenosyl-methyltransferase MraW [Escherichia coli 0.1304]
gi|408459648|gb|EKJ83429.1| S-adenosyl-methyltransferase MraW [Escherichia coli AD30]
gi|408560587|gb|EKK36850.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5.2239]
gi|408561500|gb|EKK37703.1| S-adenosyl-methyltransferase MraW [Escherichia coli 6.0172]
gi|408574115|gb|EKK49910.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0566]
gi|408574793|gb|EKK50552.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0569]
gi|408586149|gb|EKK60932.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0586]
gi|408592080|gb|EKK66473.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.2524]
gi|408593832|gb|EKK68140.1| S-adenosyl-methyltransferase MraW [Escherichia coli 10.0833]
gi|408605584|gb|EKK79078.1| S-adenosyl-methyltransferase MraW [Escherichia coli 10.0869]
gi|408606293|gb|EKK79740.1| S-adenosyl-methyltransferase MraW [Escherichia coli 8.0416]
gi|408618293|gb|EKK91380.1| S-adenosyl-methyltransferase MraW [Escherichia coli 10.0821]
gi|412961338|emb|CCK45243.1| putative apolipoprotein [Escherichia coli chi7122]
gi|412967937|emb|CCJ42550.1| putative apolipoprotein [Escherichia coli]
gi|421933544|gb|EKT91331.1| S-adenosyl-methyltransferase MraW [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421937154|gb|EKT94772.1| S-adenosyl-methyltransferase MraW [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421945225|gb|EKU02452.1| S-adenosyl-methyltransferase MraW [Escherichia coli O26:H11 str.
CFSAN001629]
gi|427215787|gb|EKV84953.1| S-adenosyl-methyltransferase MraW [Escherichia coli 88.1042]
gi|427219228|gb|EKV88197.1| S-adenosyl-methyltransferase MraW [Escherichia coli 89.0511]
gi|427219478|gb|EKV88440.1| S-adenosyl-methyltransferase MraW [Escherichia coli 88.1467]
gi|427222850|gb|EKV91614.1| S-adenosyl-methyltransferase MraW [Escherichia coli 90.0039]
gi|427235380|gb|EKW03001.1| S-adenosyl-methyltransferase MraW [Escherichia coli 90.2281]
gi|427237933|gb|EKW05455.1| S-adenosyl-methyltransferase MraW [Escherichia coli 90.0091]
gi|427252313|gb|EKW18802.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93.0056]
gi|427254157|gb|EKW20525.1| S-adenosyl-methyltransferase MraW [Escherichia coli 93.0055]
gi|427255194|gb|EKW21465.1| S-adenosyl-methyltransferase MraW [Escherichia coli 94.0618]
gi|427271660|gb|EKW36451.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.0943]
gi|427272211|gb|EKW36964.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.0183]
gi|427278894|gb|EKW43348.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.1288]
gi|427287430|gb|EKW51192.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0428]
gi|427293341|gb|EKW56595.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0427]
gi|427294920|gb|EKW58074.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0939]
gi|427305618|gb|EKW68212.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0003]
gi|427307802|gb|EKW70226.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0932]
gi|427312430|gb|EKW74586.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0107]
gi|427323184|gb|EKW84787.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.1742]
gi|427323503|gb|EKW85064.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0007]
gi|427335426|gb|EKW96456.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0713]
gi|427335827|gb|EKW96856.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0678]
gi|429260766|gb|EKY44297.1| S-adenosyl-methyltransferase MraW [Escherichia coli 96.0109]
gi|429262324|gb|EKY45666.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0010]
gi|429352414|gb|EKY89129.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02030]
gi|429353470|gb|EKY90178.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353968|gb|EKY90673.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02092]
gi|429367458|gb|EKZ04052.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02093]
gi|429368610|gb|EKZ05196.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02281]
gi|429370836|gb|EKZ07399.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02318]
gi|429383210|gb|EKZ19671.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-02913]
gi|429386059|gb|EKZ22509.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-03439]
gi|429386972|gb|EKZ23417.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-03943]
gi|429398232|gb|EKZ34575.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. 11-04080]
gi|429399948|gb|EKZ36266.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429400282|gb|EKZ36599.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429411373|gb|EKZ47583.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429412945|gb|EKZ49135.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429419997|gb|EKZ56131.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429423859|gb|EKZ59966.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429430016|gb|EKZ66083.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429435958|gb|EKZ71975.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429443142|gb|EKZ79095.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429445564|gb|EKZ81505.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429452033|gb|EKZ87920.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456884|gb|EKZ92727.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430880031|gb|ELC03352.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE4]
gi|430881046|gb|ELC04308.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE5]
gi|430881297|gb|ELC04551.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE2]
gi|430889737|gb|ELC12397.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE10]
gi|430901860|gb|ELC23756.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE15]
gi|430910995|gb|ELC32293.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE16]
gi|430918949|gb|ELC39900.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE25]
gi|430923592|gb|ELC44327.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE21]
gi|430930279|gb|ELC50780.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE26]
gi|430944600|gb|ELC64691.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE44]
gi|430948203|gb|ELC67884.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE178]
gi|430948377|gb|ELC67965.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE181]
gi|430969824|gb|ELC86917.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE189]
gi|430975432|gb|ELC92327.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE193]
gi|430976651|gb|ELC93509.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE191]
gi|430983240|gb|ELC99903.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE204]
gi|430988138|gb|ELD04638.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE205]
gi|431001391|gb|ELD16974.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE206]
gi|431011547|gb|ELD25622.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE210]
gi|431011772|gb|ELD25846.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE208]
gi|431014140|gb|ELD27849.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE213]
gi|431019951|gb|ELD33342.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE212]
gi|431032822|gb|ELD45528.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE216]
gi|431045407|gb|ELD55640.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE224]
gi|431046116|gb|ELD56235.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE228]
gi|431058200|gb|ELD67609.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE233]
gi|431064931|gb|ELD73785.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE234]
gi|431065062|gb|ELD73839.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE235]
gi|431068184|gb|ELD76689.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE236]
gi|431086619|gb|ELD92641.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE237]
gi|431087815|gb|ELD93736.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE47]
gi|431095127|gb|ELE00750.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE49]
gi|431100968|gb|ELE05937.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE51]
gi|431109753|gb|ELE13703.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE56]
gi|431111702|gb|ELE15593.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE55]
gi|431123033|gb|ELE25776.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE57]
gi|431124312|gb|ELE26958.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE58]
gi|431134576|gb|ELE36525.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE62]
gi|431144634|gb|ELE46328.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE66]
gi|431152418|gb|ELE53369.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE72]
gi|431153117|gb|ELE54036.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE76]
gi|431158589|gb|ELE59187.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE75]
gi|431165382|gb|ELE65735.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE80]
gi|431165995|gb|ELE66322.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE77]
gi|431174667|gb|ELE74703.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE81]
gi|431176002|gb|ELE75988.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE83]
gi|431185494|gb|ELE85223.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE86]
gi|431196172|gb|ELE95117.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE93]
gi|431204173|gb|ELF02746.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE111]
gi|431205280|gb|ELF03773.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE116]
gi|431208086|gb|ELF06309.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE142]
gi|431214611|gb|ELF12365.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE119]
gi|431225445|gb|ELF22645.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE143]
gi|431225882|gb|ELF23068.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE156]
gi|431232541|gb|ELF28207.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE161]
gi|431238216|gb|ELF33155.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE162]
gi|431247576|gb|ELF41797.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE169]
gi|431248028|gb|ELF42237.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE171]
gi|431253558|gb|ELF47037.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE6]
gi|431260312|gb|ELF52410.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE8]
gi|431267959|gb|ELF59474.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE9]
gi|431268891|gb|ELF60252.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE17]
gi|431277336|gb|ELF68350.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE18]
gi|431287228|gb|ELF78046.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE23]
gi|431287819|gb|ELF78605.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE42]
gi|431291569|gb|ELF82072.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE29]
gi|431296379|gb|ELF86091.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE43]
gi|431297497|gb|ELF87147.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE22]
gi|431314442|gb|ELG02394.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE48]
gi|431321746|gb|ELG09346.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE54]
gi|431331599|gb|ELG18845.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE59]
gi|431333677|gb|ELG20862.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE65]
gi|431351941|gb|ELG38727.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE91]
gi|431352134|gb|ELG38918.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE84]
gi|431358334|gb|ELG44992.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE101]
gi|431359293|gb|ELG45938.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE115]
gi|431371191|gb|ELG56976.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE118]
gi|431374945|gb|ELG60289.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE123]
gi|431380725|gb|ELG65364.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE135]
gi|431389284|gb|ELG72997.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE136]
gi|431392475|gb|ELG76048.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE140]
gi|431405972|gb|ELG89204.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE147]
gi|431408630|gb|ELG91813.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE146]
gi|431415138|gb|ELG97688.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE154]
gi|431420893|gb|ELH03114.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE158]
gi|431426074|gb|ELH08119.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE165]
gi|431430896|gb|ELH12675.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE192]
gi|431438511|gb|ELH19885.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE194]
gi|431448693|gb|ELH29406.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE190]
gi|431448951|gb|ELH29663.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE173]
gi|431450715|gb|ELH31200.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE175]
gi|431456377|gb|ELH36721.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE183]
gi|431457355|gb|ELH37694.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE184]
gi|431464580|gb|ELH44699.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE196]
gi|431472466|gb|ELH52354.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE197]
gi|431475587|gb|ELH55391.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE203]
gi|431487660|gb|ELH67304.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE207]
gi|431499000|gb|ELH78182.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE211]
gi|431499922|gb|ELH78939.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE217]
gi|431507870|gb|ELH86152.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE215]
gi|431518573|gb|ELH96027.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE227]
gi|431519042|gb|ELH96494.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE229]
gi|431527876|gb|ELI04590.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE106]
gi|431536823|gb|ELI12979.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE104]
gi|431537990|gb|ELI14095.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE105]
gi|431546816|gb|ELI21203.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE109]
gi|431557115|gb|ELI30889.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE113]
gi|431561224|gb|ELI34608.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE117]
gi|431561673|gb|ELI35038.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE112]
gi|431574411|gb|ELI47192.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE120]
gi|431576392|gb|ELI49079.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE122]
gi|431579130|gb|ELI51715.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE129]
gi|431593067|gb|ELI63631.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE128]
gi|431603233|gb|ELI72659.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE131]
gi|431607238|gb|ELI76608.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE133]
gi|431616205|gb|ELI85272.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE138]
gi|431621015|gb|ELI89837.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE139]
gi|431624436|gb|ELI93056.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE145]
gi|431633419|gb|ELJ01699.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE150]
gi|431634978|gb|ELJ03194.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE148]
gi|431636674|gb|ELJ04804.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE157]
gi|431652682|gb|ELJ19830.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE163]
gi|431664376|gb|ELJ31116.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE166]
gi|431667959|gb|ELJ34535.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE168]
gi|431679182|gb|ELJ45096.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE176]
gi|431683191|gb|ELJ48829.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE177]
gi|431693254|gb|ELJ58670.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE179]
gi|431695063|gb|ELJ60399.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE180]
gi|431697154|gb|ELJ62299.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE232]
gi|431698847|gb|ELJ63872.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE85]
gi|431699472|gb|ELJ64477.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE88]
gi|431711622|gb|ELJ75935.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE82]
gi|431723696|gb|ELJ87641.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE90]
gi|431727251|gb|ELJ91011.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE95]
gi|432346513|gb|ELL40994.1| S-adenosyl-methyltransferase MraW [Escherichia coli J96]
gi|441605925|emb|CCP97303.1| rRNA small subunit methyltransferase H [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441653569|emb|CCQ03898.1| rRNA small subunit methyltransferase H [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443420605|gb|AGC85509.1| S-adenosyl-methyltransferase MraW [Escherichia coli APEC O78]
gi|444543406|gb|ELV22668.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0814]
gi|444552108|gb|ELV29951.1| S-adenosyl-methyltransferase MraW [Escherichia coli 09BKT078844]
gi|444552680|gb|ELV30458.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0815]
gi|444566121|gb|ELV42957.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0839]
gi|444568379|gb|ELV45054.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0816]
gi|444572929|gb|ELV49330.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0848]
gi|444583786|gb|ELV59474.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1753]
gi|444586886|gb|ELV62366.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1775]
gi|444587193|gb|ELV62663.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1793]
gi|444601025|gb|ELV75834.1| S-adenosyl-methyltransferase MraW [Escherichia coli ATCC 700728]
gi|444601356|gb|ELV76163.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA11]
gi|444602137|gb|ELV76892.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA13]
gi|444609965|gb|ELV84401.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1805]
gi|444616496|gb|ELV90658.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA19]
gi|444625129|gb|ELV99000.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA2]
gi|444633675|gb|ELW07178.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA48]
gi|444633998|gb|ELW07489.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA47]
gi|444639301|gb|ELW12620.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA8]
gi|444649097|gb|ELW22003.1| S-adenosyl-methyltransferase MraW [Escherichia coli 7.1982]
gi|444651257|gb|ELW24066.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1781]
gi|444655285|gb|ELW27904.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.1762]
gi|444664461|gb|ELW36649.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA35]
gi|444668746|gb|ELW40746.1| S-adenosyl-methyltransferase MraW [Escherichia coli 3.4880]
gi|444673645|gb|ELW45271.1| S-adenosyl-methyltransferase MraW [Escherichia coli 95.0083]
gi|444675085|gb|ELW46566.1| S-adenosyl-methyltransferase MraW [Escherichia coli 99.0670]
gi|449323898|gb|EMD13844.1| S-adenosyl-methyltransferase MraW [Escherichia coli O08]
gi|449325686|gb|EMD15589.1| S-adenosyl-methyltransferase MraW [Escherichia coli SEPT362]
gi|449325862|gb|EMD15759.1| S-adenosyl-methyltransferase MraW [Escherichia coli S17]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|157147494|ref|YP_001454813.1| S-adenosyl-methyltransferase MraW [Citrobacter koseri ATCC BAA-895]
gi|263446032|sp|A8ALL4.1|RSMH_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157084699|gb|ABV14377.1| hypothetical protein CKO_03293 [Citrobacter koseri ATCC BAA-895]
Length = 314
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL RLG++GRL+AID+D ++++
Sbjct: 11 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSRLGEEGRLLAIDRDPQAIAEAQA 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 INDPRFSIIHGPFSALADYVSERELIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 128 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 188 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 248 RIVKRFMREQSRGPQVPAGLPM 269
>gi|416784968|ref|ZP_11878444.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H- str.
493-89]
gi|416795740|ref|ZP_11883282.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H- str.
H 2687]
gi|419073141|ref|ZP_13618717.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3F]
gi|420283748|ref|ZP_14785973.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW06591]
gi|425264678|ref|ZP_18656634.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5412]
gi|209746624|gb|ACI71619.1| putative apolipoprotein [Escherichia coli]
gi|320647484|gb|EFX16279.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H- str.
493-89]
gi|320652818|gb|EFX21056.1| 16S rRNA m(4)C1402 methyltranserfase [Escherichia coli O157:H- str.
H 2687]
gi|377933716|gb|EHU97560.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC3F]
gi|390778415|gb|EIO46173.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW06591]
gi|408193680|gb|EKI19198.1| S-adenosyl-methyltransferase MraW [Escherichia coli 5412]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNRKQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|401762266|ref|YP_006577273.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400173800|gb|AFP68649.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRVEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|53720643|ref|YP_109629.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
K96243]
gi|167817538|ref|ZP_02449218.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei 91]
gi|115311582|sp|Q63QI9.1|RSMH_BURPS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|52211057|emb|CAH37045.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
K96243]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGYAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L I ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGIGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADLPRPPLKLLGRMFP 289
>gi|311280938|ref|YP_003943169.1| S-adenosyl-methyltransferase MraW [Enterobacter cloacae SCF1]
gi|308750133|gb|ADO49885.1| S-adenosyl-methyltransferase MraW [Enterobacter cloacae SCF1]
Length = 313
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D E+ ++ N
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPEATAVANT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYAAERSLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIEQALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|215485248|ref|YP_002327679.1| S-adenosyl-methyltransferase MraW [Escherichia coli O127:H6 str.
E2348/69]
gi|312966210|ref|ZP_07780436.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2362-75]
gi|417753899|ref|ZP_12401996.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2B]
gi|418995210|ref|ZP_13542830.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1A]
gi|419000241|ref|ZP_13547808.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1B]
gi|419005799|ref|ZP_13553257.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1C]
gi|419011630|ref|ZP_13559000.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1D]
gi|419016568|ref|ZP_13563896.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1E]
gi|419022160|ref|ZP_13569409.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2A]
gi|419027055|ref|ZP_13574259.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2C]
gi|419032963|ref|ZP_13580064.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2D]
gi|419037834|ref|ZP_13584897.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2E]
gi|263447451|sp|B7UID2.1|RSMH_ECO27 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|215263320|emb|CAS07635.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli O127:H6 str. E2348/69]
gi|312289453|gb|EFR17347.1| S-adenosyl-methyltransferase MraW [Escherichia coli 2362-75]
gi|377850577|gb|EHU15539.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1A]
gi|377851540|gb|EHU16485.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1C]
gi|377855169|gb|EHU20044.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1B]
gi|377865164|gb|EHU29956.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1D]
gi|377867775|gb|EHU32529.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC1E]
gi|377869243|gb|EHU33960.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2A]
gi|377880829|gb|EHU45395.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2B]
gi|377884894|gb|EHU49402.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2D]
gi|377886291|gb|EHU50773.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2C]
gi|377899342|gb|EHU63690.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC2E]
Length = 313
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLASGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|345297860|ref|YP_004827218.1| ribosomal RNA small subunit methyltransferase H [Enterobacter
asburiae LF7a]
gi|345091797|gb|AEN63433.1| Ribosomal RNA small subunit methyltransferase H [Enterobacter
asburiae LF7a]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|206580699|ref|YP_002240446.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae 342]
gi|288937146|ref|YP_003441205.1| S-adenosyl-methyltransferase MraW [Klebsiella variicola At-22]
gi|290512569|ref|ZP_06551935.1| S-adenosyl-methyltransferase MraW [Klebsiella sp. 1_1_55]
gi|263456192|sp|B5Y1V5.1|RSMH_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|206569757|gb|ACI11533.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae 342]
gi|288891855|gb|ADC60173.1| S-adenosyl-methyltransferase MraW [Klebsiella variicola At-22]
gi|289774910|gb|EFD82912.1| S-adenosyl-methyltransferase MraW [Klebsiella sp. 1_1_55]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL RLG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSRLGAEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L + + N+ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSQLADYVDERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKHKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|401677448|ref|ZP_10809423.1| RsmH Protein [Enterobacter sp. SST3]
gi|400215296|gb|EJO46207.1| RsmH Protein [Enterobacter sp. SST3]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSIDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|372275994|ref|ZP_09512030.1| 16S rRNA m(4)C1402 methyltranserfase [Pantoea sp. SL1_M5]
gi|390436822|ref|ZP_10225360.1| 16S rRNA m(4)C1402 methyltranserfase [Pantoea agglomerans IG1]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/283 (48%), Positives = 199/283 (70%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KG+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGEKGKLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+ L + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIIHGPFSALAEYVSERDLVGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA++WL +A E +I V++ YGEERFAK+IA+ IV P+TRT++L E+
Sbjct: 127 RMDPSRGHSAAEWLLHAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTRELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATR+FQAIRI+IN EL+ + IALK + L +GR+ VISFHSLED
Sbjct: 187 ISIAMPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGAVEVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
R+VK F+ ++ P + +P+ + ++K L + P
Sbjct: 247 RLVKRFMRDQSRGPQVPPGIPMTEHQLRALGGRELKLLGKMSP 289
>gi|365968995|ref|YP_004950556.1| ribosomal RNA small subunit methyltransferase H [Enterobacter
cloacae EcWSU1]
gi|365747908|gb|AEW72135.1| Ribosomal RNA small subunit methyltransferase H [Enterobacter
cloacae EcWSU1]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|386627593|ref|YP_006147313.1| S-adenosyl-methyltransferase MraW [Escherichia coli str. 'clone D
i2']
gi|386632513|ref|YP_006152232.1| S-adenosyl-methyltransferase MraW [Escherichia coli str. 'clone D
i14']
gi|355418492|gb|AER82689.1| S-adenosyl-methyltransferase MraW [Escherichia coli str. 'clone D
i2']
gi|355423412|gb|AER87608.1| S-adenosyl-methyltransferase MraW [Escherichia coli str. 'clone D
i14']
Length = 346
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 43 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 99
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + + I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 100 IDDPRFSIIHGPFSALGEYVADRDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 159
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV + P+TRTK+L E+
Sbjct: 160 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVEHNREQPMTRTKELAEV 219
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 220 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLHVLAPGGRLSIISFHSLED 279
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 280 RIVKRFMRENSRGPQVPAGLPM 301
>gi|421728287|ref|ZP_16167442.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella oxytoca M5al]
gi|423127388|ref|ZP_17115067.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5250]
gi|376394427|gb|EHT07077.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5250]
gi|410370968|gb|EKP25694.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella oxytoca M5al]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPNGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSQLADYVGERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEEQLKKLGGRELRALGKLMPGEK 292
>gi|417287547|ref|ZP_12074833.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW07793]
gi|419699005|ref|ZP_14226629.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli SCI-07]
gi|422380424|ref|ZP_16460602.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 57-2]
gi|425298254|ref|ZP_18688312.1| S-adenosyl-methyltransferase MraW [Escherichia coli 07798]
gi|432730802|ref|ZP_19965663.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE45]
gi|432762352|ref|ZP_19996817.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE46]
gi|324008349|gb|EGB77568.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 57-2]
gi|380349889|gb|EIA38153.1| 16S rRNA m(4)C1402 methyltransferase [Escherichia coli SCI-07]
gi|386248332|gb|EII94504.1| S-adenosyl-methyltransferase MraW [Escherichia coli TW07793]
gi|408222001|gb|EKI45908.1| S-adenosyl-methyltransferase MraW [Escherichia coli 07798]
gi|431278816|gb|ELF69789.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE45]
gi|431302547|gb|ELF91727.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE46]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDRRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|123441024|ref|YP_001005013.1| S-adenosyl-methyltransferase MraW [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|263504660|sp|A1JJI5.1|RSMH_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|122087985|emb|CAL10773.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 320
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 190/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +++ N + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRELNLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRGISA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGISAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|421885022|ref|ZP_16316225.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|379985401|emb|CCF88498.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 195/286 (68%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK + L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLRVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|117622368|ref|YP_851281.1| S-adenosyl-methyltransferase MraW [Escherichia coli APEC O1]
gi|331640535|ref|ZP_08341683.1| S-adenosyl-methyltransferase MraW [Escherichia coli H736]
gi|331645192|ref|ZP_08346303.1| S-adenosyl-methyltransferase MraW [Escherichia coli M605]
gi|331650979|ref|ZP_08352007.1| S-adenosyl-methyltransferase MraW [Escherichia coli M718]
gi|331671601|ref|ZP_08372399.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA280]
gi|331680655|ref|ZP_08381314.1| S-adenosyl-methyltransferase MraW [Escherichia coli H591]
gi|115511492|gb|ABI99566.1| S-adenosyl-methyltransferase [Escherichia coli APEC O1]
gi|331040281|gb|EGI12488.1| S-adenosyl-methyltransferase MraW [Escherichia coli H736]
gi|331045949|gb|EGI18068.1| S-adenosyl-methyltransferase MraW [Escherichia coli M605]
gi|331051433|gb|EGI23482.1| S-adenosyl-methyltransferase MraW [Escherichia coli M718]
gi|331071446|gb|EGI42803.1| S-adenosyl-methyltransferase MraW [Escherichia coli TA280]
gi|331072118|gb|EGI43454.1| S-adenosyl-methyltransferase MraW [Escherichia coli H591]
Length = 346
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 43 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 99
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 100 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 159
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 160 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 219
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 220 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 279
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 280 RIVKRFMRENSRGPQVPAGLPM 301
>gi|194434429|ref|ZP_03066691.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 1012]
gi|417670663|ref|ZP_12320165.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 155-74]
gi|194417345|gb|EDX33452.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 1012]
gi|332098043|gb|EGJ03016.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 155-74]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATSVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPVGLPM 268
>gi|416285052|ref|ZP_11647592.1| rRNA small subunit methyltransferase H [Shigella boydii ATCC 9905]
gi|320179644|gb|EFW54593.1| rRNA small subunit methyltransferase H [Shigella boydii ATCC 9905]
Length = 313
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPGGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|296101245|ref|YP_003611391.1| hypothetical protein ECL_00879 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055704|gb|ADF60442.1| hypothetical protein ECL_00879 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|334123464|ref|ZP_08497489.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterobacter hormaechei ATCC 49162]
gi|419956663|ref|ZP_14472730.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
gi|449474443|ref|XP_004154175.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Cucumis sativus]
gi|295098586|emb|CBK87676.1| S-adenosyl-methyltransferase MraW [Enterobacter cloacae subsp.
cloacae NCTC 9394]
gi|333390673|gb|EGK61805.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterobacter hormaechei ATCC 49162]
gi|388608420|gb|EIM37623.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRVEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|242238092|ref|YP_002986273.1| S-adenosyl-methyltransferase MraW [Dickeya dadantii Ech703]
gi|263446348|sp|C6C9K0.1|RSMH_DICDC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|242130149|gb|ACS84451.1| S-adenosyl-methyltransferase MraW [Dickeya dadantii Ech703]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/262 (52%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL LG G+L+AID+D ++VS +
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSHLGTDGQLLAIDRDPQAVSAASA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RFSIIH F+ L D + ++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IHDARFSIIHGPFSSLADYVAERGLVGRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL NA +I V++ +GEERFAK+IA+ IV + P+TRTK L E+
Sbjct: 127 RMDPSRGVSAAEWLMNAEADDIAWVLKTFGEERFAKRIARAIVERNRVEPLTRTKALAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL + AL+ + L GR+ VISFHSLED
Sbjct: 187 IAAACPIREKHKHPATRSFQAIRIYINSELDEIERALEGALQVLAPHGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI +++ P + LP+
Sbjct: 247 RIVKRFIRQHSRGPQVPAGLPL 268
>gi|152968667|ref|YP_001333776.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893062|ref|YP_002917796.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262044874|ref|ZP_06017917.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|330012015|ref|ZP_08307232.1| S-adenosyl-methyltransferase MraW [Klebsiella sp. MS 92-3]
gi|365142646|ref|ZP_09347762.1| ribosomal RNA small subunit methyltransferase H [Klebsiella sp.
4_1_44FAA]
gi|378976961|ref|YP_005225102.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386033145|ref|YP_005953058.1| 16S rRNA m(4)C1402 methyltranserfase [Klebsiella pneumoniae KCTC
2242]
gi|402782437|ref|YP_006637983.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|419761809|ref|ZP_14288060.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|419973474|ref|ZP_14488898.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980119|ref|ZP_14495406.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985010|ref|ZP_14500153.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990094|ref|ZP_14505067.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419995974|ref|ZP_14510778.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003103|ref|ZP_14517751.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420007848|ref|ZP_14522340.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013819|ref|ZP_14528128.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019130|ref|ZP_14533324.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024622|ref|ZP_14538634.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031615|ref|ZP_14545435.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420037941|ref|ZP_14551592.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042173|ref|ZP_14555667.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048377|ref|ZP_14561691.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053581|ref|ZP_14566758.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420059453|ref|ZP_14572460.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065196|ref|ZP_14578003.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073125|ref|ZP_14585755.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075997|ref|ZP_14588471.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084584|ref|ZP_14596838.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421909964|ref|ZP_16339759.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919309|ref|ZP_16348812.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424828947|ref|ZP_18253675.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078392|ref|ZP_18481495.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425079851|ref|ZP_18482948.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425089024|ref|ZP_18492117.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425089969|ref|ZP_18493054.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428151092|ref|ZP_18998837.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428931513|ref|ZP_19005108.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae JHCK1]
gi|428938457|ref|ZP_19011584.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae VA360]
gi|449051300|ref|ZP_21731899.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae hvKP1]
gi|263456196|sp|A6T4M5.1|RSMH_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|150953516|gb|ABR75546.1| S-adenosyl-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545378|dbj|BAH61729.1| S-adenosyl-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259037843|gb|EEW39071.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|328534004|gb|EGF60656.1| S-adenosyl-methyltransferase MraW [Klebsiella sp. MS 92-3]
gi|339760273|gb|AEJ96493.1| 16S rRNA m(4)C1402 methyltranserfase [Klebsiella pneumoniae KCTC
2242]
gi|363651428|gb|EHL90496.1| ribosomal RNA small subunit methyltransferase H [Klebsiella sp.
4_1_44FAA]
gi|364516372|gb|AEW59500.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397347035|gb|EJJ40145.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397348113|gb|EJJ41215.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397352994|gb|EJJ46071.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397366095|gb|EJJ58714.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397367709|gb|EJJ60318.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370410|gb|EJJ62993.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397379141|gb|EJJ71339.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383934|gb|EJJ76061.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397389296|gb|EJJ81238.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397398559|gb|EJJ90221.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397399762|gb|EJJ91412.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404898|gb|EJJ96384.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397415565|gb|EJK06750.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397416822|gb|EJK07992.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397423809|gb|EJK14726.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397432283|gb|EJK22947.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435451|gb|EJK26066.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438266|gb|EJK28778.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447959|gb|EJK38144.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450046|gb|EJK40162.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|397745350|gb|EJK92557.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|402543295|gb|AFQ67444.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405590253|gb|EKB63787.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405600162|gb|EKB73329.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405606776|gb|EKB79746.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405614533|gb|EKB87232.1| ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|410116094|emb|CCM82384.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118340|emb|CCM91437.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414706363|emb|CCN28067.1| S-adenosyl-methyltransferase MraW [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305685|gb|EKV67802.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae VA360]
gi|426308012|gb|EKV70083.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae JHCK1]
gi|427538911|emb|CCM94975.1| rRNA small subunit methyltransferase H [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876288|gb|EMB11282.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL RLG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSRLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L + + N+ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSQLAEYVGERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEDDIAWVIKTFGEERFGKRIARAIVERNRIQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKHKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|419399987|ref|ZP_13940741.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15B]
gi|378239137|gb|EHX99131.1| S-adenosyl-methyltransferase MraW [Escherichia coli DEC15B]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLVPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|238786715|ref|ZP_04630516.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
frederiksenii ATCC 33641]
gi|238725083|gb|EEQ16722.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
frederiksenii ATCC 33641]
Length = 320
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +++ + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRELDLVGRIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA+ WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGLSAADWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|425203452|ref|ZP_18599614.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK2001]
gi|408132997|gb|EKH62914.1| S-adenosyl-methyltransferase MraW [Escherichia coli FRIK2001]
Length = 304
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 1 MLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 57
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFS IH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 58 IDDPRFSTIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 118 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 178 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 237
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 238 RIVKRFMRENSRGPQVPAGLPM 259
>gi|421867596|ref|ZP_16299254.1| rRNA small subunit methyltransferase H [Burkholderia cenocepacia
H111]
gi|358072534|emb|CCE50132.1| rRNA small subunit methyltransferase H [Burkholderia cenocepacia
H111]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 186/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS +L RL RLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGVYVDGTFGRGGHSRAVLARLAPAARLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|323527438|ref|YP_004229591.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. CCGE1001]
gi|323384440|gb|ADX56531.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. CCGE1001]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 183/281 (65%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R +G+Y+D TFG+GGHS +LE+L + GRLIA DKD +++ +
Sbjct: 10 VLLEEAVEALVT---RADGVYVDGTFGRGGHSRLVLEKLSEAGRLIAFDKDPLAIATAQQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H F L + I+++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IADPRFGIVHESFASLRTAIAARGIERVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAADWLARATVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLVSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 187 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALALLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
LEDRIVK F+ + P +DRRLPI L P +K + R
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIIGRV 287
>gi|227885013|ref|ZP_04002818.1| S-adenosyl-methyltransferase MraW [Escherichia coli 83972]
gi|301048472|ref|ZP_07195498.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 185-1]
gi|386637434|ref|YP_006104232.1| S-adenosyl-dependent methyltransferase MraW [Escherichia coli ABU
83972]
gi|432410081|ref|ZP_19652769.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE39]
gi|432430240|ref|ZP_19672690.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE187]
gi|432434627|ref|ZP_19677038.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE188]
gi|432493906|ref|ZP_19735728.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE214]
gi|432522220|ref|ZP_19759365.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE230]
gi|432566951|ref|ZP_19803483.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE53]
gi|432591081|ref|ZP_19827414.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE60]
gi|432605944|ref|ZP_19842144.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE67]
gi|432842341|ref|ZP_20075769.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE141]
gi|433206249|ref|ZP_20389959.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE97]
gi|433210998|ref|ZP_20394623.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE99]
gi|227837842|gb|EEJ48308.1| S-adenosyl-methyltransferase MraW [Escherichia coli 83972]
gi|300299686|gb|EFJ56071.1| S-adenosyl-methyltransferase MraW [Escherichia coli MS 185-1]
gi|307551926|gb|ADN44701.1| S-adenosyl-dependent methyltransferase MraW [Escherichia coli ABU
83972]
gi|430939573|gb|ELC59789.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE39]
gi|430957546|gb|ELC76198.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE187]
gi|430968112|gb|ELC85345.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE188]
gi|431029680|gb|ELD42711.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE214]
gi|431055560|gb|ELD65099.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE230]
gi|431103530|gb|ELE08173.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE53]
gi|431133642|gb|ELE35609.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE60]
gi|431142212|gb|ELE43962.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE67]
gi|431398109|gb|ELG81532.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE141]
gi|431733993|gb|ELJ97395.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE97]
gi|431736706|gb|ELK00031.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE99]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + + I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVADRDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLHVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|74310701|ref|YP_309120.1| S-adenosyl-methyltransferase MraW [Shigella sonnei Ss046]
gi|383176679|ref|YP_005454684.1| 16S rRNA m(4)C1402 methyltransferase [Shigella sonnei 53G]
gi|414574262|ref|ZP_11431477.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 3233-85]
gi|415849836|ref|ZP_11526907.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 53G]
gi|418261496|ref|ZP_12883490.1| S-adenosyl-methyltransferase MraW [Shigella sonnei str. Moseley]
gi|420356640|ref|ZP_14857667.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 3226-85]
gi|420361641|ref|ZP_14862574.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 4822-66]
gi|88909219|sp|Q3Z5S7.1|RSMH_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|73854178|gb|AAZ86885.1| putative apolipoprotein [Shigella sonnei Ss046]
gi|323165965|gb|EFZ51745.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 53G]
gi|391290147|gb|EIQ48622.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 3233-85]
gi|391290748|gb|EIQ49207.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 3226-85]
gi|391297527|gb|EIQ55578.1| S-adenosyl-methyltransferase MraW [Shigella sonnei 4822-66]
gi|397903725|gb|EJL20020.1| S-adenosyl-methyltransferase MraW [Shigella sonnei str. Moseley]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAVATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|304413635|ref|ZP_07395079.1| S-adenosyl-dependent methyltransferase [Candidatus Regiella
insecticola LSR1]
gi|304283726|gb|EFL92120.1| S-adenosyl-dependent methyltransferase [Candidatus Regiella
insecticola LSR1]
Length = 313
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/298 (47%), Positives = 201/298 (67%), Gaps = 14/298 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L +A++ LN+ R +GIY+D TFG GGHS IL RLG++GRLIAID+D ++V +
Sbjct: 10 VLLEQAVHCLNL---RDDGIYVDGTFGLGGHSRLILSRLGQQGRLIAIDRDPQAVEVAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+EL ++ + I +IDG+LFDLG+SS Q++N RGFSF+ DGPLDM
Sbjct: 67 ITDPRFSIIHGPFSELARYAQESDLIGRIDGVLFDLGVSSPQLDNPQRGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A+ I V++ +GEERFAK++A+ IV P+ RT++L ++
Sbjct: 127 RMDPSRGLSAAQWLMKASADEIAWVLKTFGEERFAKRLARAIVERNQQQPMHRTQELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I+ + +++K+PATR+FQAIRIYIN EL+ ++ AL+ L KGRI VISFHSLED
Sbjct: 187 IVNILPMREKHKHPATRSFQAIRIYINSELEEITRALEASLSVLAPKGRISVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQV 523
RIVKNFI ++ P I P+ L E +++ + N+K P+ +V
Sbjct: 247 RIVKNFIRQQSRGPQI----PVGMPLTETQLRLMGGA------NLKTMGKMMPSAEEV 294
>gi|238784576|ref|ZP_04628583.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
bercovieri ATCC 43970]
gi|238714542|gb|EEQ06547.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
bercovieri ATCC 43970]
Length = 320
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/262 (52%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+EL +++ + + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSELAHYVRELDLVGRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGLSAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGAHEVLADEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI ++ P + LP+
Sbjct: 254 RIVKNFIRQRSRGPQVPAGLPL 275
>gi|386080674|ref|YP_005994199.1| S-adenosyl-methyltransferase MraW [Pantoea ananatis PA13]
gi|354989855|gb|AER33979.1| S-adenosyl-methyltransferase MraW [Pantoea ananatis PA13]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI+ +GIYID TFG+GGHS IL +LG G+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNIKE---DGIYIDGTFGRGGHSRLILAQLGASGKLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IKDPRFSIVHGPFSALADYVAERELVGRIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGHSAAEWLMQAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI+IN EL+ + ALK + L +GR+ VISFHSLED
Sbjct: 187 IAAATPIKDKFKHPATRSFQAIRIWINSELEEIDTALKGAVEVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + R LP+
Sbjct: 247 RLVKRFMRDQSRGPQVPRGLPM 268
>gi|238791165|ref|ZP_04634804.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
intermedia ATCC 29909]
gi|238729298|gb|EEQ20813.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
intermedia ATCC 29909]
Length = 320
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+EL +++ + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSELAHYVRELDLVGRIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPSRGLSAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPAGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|291616264|ref|YP_003519006.1| MraW [Pantoea ananatis LMG 20103]
gi|378768556|ref|YP_005197029.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Pantoea
ananatis LMG 5342]
gi|386014657|ref|YP_005932934.1| S-adenosyl-methyltransferase MraW [Pantoea ananatis AJ13355]
gi|291151294|gb|ADD75878.1| MraW [Pantoea ananatis LMG 20103]
gi|327392716|dbj|BAK10138.1| S-adenosyl-methyltransferase MraW [Pantoea ananatis AJ13355]
gi|365188042|emb|CCF10992.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Pantoea
ananatis LMG 5342]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI+ +GIYID TFG+GGHS IL +LG G+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNIKE---DGIYIDGTFGRGGHSRLILAQLGASGKLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IKDPRFSIVHGPFSALADYVAERELVGRIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGHSAAEWLKQAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI+IN EL+ + ALK + L +GR+ VISFHSLED
Sbjct: 187 IAAATPIKDKFKHPATRSFQAIRIWINSELEEIDTALKGAVEVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + R LP+
Sbjct: 247 RLVKRFMRDQSRGPQVPRGLPM 268
>gi|284008372|emb|CBA74773.1| S-adenosyl-methyltransferase [Arsenophonus nasoniae]
Length = 393
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/290 (49%), Positives = 201/290 (69%), Gaps = 12/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIY+D TFG+GGHS IL RLG KGRLIAID+D +V+ +
Sbjct: 87 VLLDEAVNGLNI---KANGIYVDGTFGRGGHSQLILSRLGSKGRLIAIDRDPHAVAAAEE 143
Query: 287 -ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
ITD+RFSI H F++L + + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 144 MITDNRFSIKHGSFSQLQTFIAQEGLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLD 203
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQ 401
MRMD T G SA++WL A E +I V++ YGEERFAK+IAK IV H+ + P+TRTKQ
Sbjct: 204 MRMDPTTGQSAAQWLMKADEADIAWVLKTYGEERFAKRIAKAIVARNHHSAEEPLTRTKQ 263
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
L E+I + +++K+PATR+FQAIRIYIN EL+ ++ AL+ L +GR+ +ISFH
Sbjct: 264 LAELIAQVSPFKEKHKHPATRSFQAIRIYINSELEEIAKALEGSLNILAPQGRLSIISFH 323
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFE----PKMKFLARCKPKKK 507
SLEDR+VK FI +++ P + LP+ + + P +K L + KP ++
Sbjct: 324 SLEDRLVKRFIREHSRGPKVPVGLPLTDVQLKAIGSPILKVLGKMKPTER 373
>gi|354721652|ref|ZP_09035867.1| 16S rRNA m(4)C1402 methyltranserfase [Enterobacter mori LMG 25706]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKNSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|206561807|ref|YP_002232572.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia J2315]
gi|444362203|ref|ZP_21162761.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia BC7]
gi|444370384|ref|ZP_21170059.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia
K56-2Valvano]
gi|263447024|sp|B4E6K0.1|RSMH_BURCJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|198037849|emb|CAR53793.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia J2315]
gi|443597288|gb|ELT65726.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia BC7]
gi|443597443|gb|ELT65868.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia
K56-2Valvano]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 186/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS +L RL RLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGVYVDGTFGRGGHSRAVLARLAPAARLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IKDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|392977587|ref|YP_006476175.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392323520|gb|AFM58473.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGADGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRVEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|423709806|ref|ZP_17684160.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
B799]
gi|385705254|gb|EIG42320.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
B799]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATR+FQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRSFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|423138638|ref|ZP_17126276.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379051192|gb|EHY69083.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 313
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 195/286 (68%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPIKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|409407891|ref|ZP_11256342.1| hypothetical protein GWL_34960 [Herbaspirillum sp. GW103]
gi|386433642|gb|EIJ46468.1| hypothetical protein GWL_34960 [Herbaspirillum sp. GW103]
Length = 263
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 164/219 (74%), Gaps = 6/219 (2%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
+ LN +Y DYCPNGLQVEGR+ I +V+GVTASL LI+ AV ADAILVHHGYFW+GE
Sbjct: 25 QTLNAAQYRDYCPNGLQVEGRATIGRVVSGVTASLALIEAAVQWQADAILVHHGYFWRGE 84
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGW 625
+ ++G K++RL+ L+ + INL+ YHLPLD HP+LGNNAQLAK L+F T RF +N+IGW
Sbjct: 85 DMRVIGQKQRRLKLLLAHDINLFGYHLPLDCHPELGNNAQLAKRLDFDATGRFGENDIGW 144
Query: 626 IGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDA 685
IG+ + + T DL I +++G+ P++IGD ++ I ++ WCTGAAQ +L +A
Sbjct: 145 IGRCLA------PSVKTAADLAQLIEKRLGRTPLLIGDPHQSIAQVAWCTGAAQGMLGEA 198
Query: 686 INEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
I+ G TAYISGEISE TV+++RESG Y AAGHHATERY
Sbjct: 199 IDAGATAYISGEISEPTVHLARESGTVYLAAGHHATERY 237
>gi|168464328|ref|ZP_02698231.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194443193|ref|YP_002039352.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|416508760|ref|ZP_11736207.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416522780|ref|ZP_11740668.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416564771|ref|ZP_11763495.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|418762589|ref|ZP_13318716.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418768490|ref|ZP_13324538.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418770436|ref|ZP_13326457.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418777692|ref|ZP_13333619.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418779331|ref|ZP_13335234.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418786685|ref|ZP_13342498.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418800919|ref|ZP_13356563.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418805813|ref|ZP_13361391.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418810174|ref|ZP_13365715.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418816399|ref|ZP_13371891.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418820881|ref|ZP_13376312.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418828580|ref|ZP_13383607.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418830611|ref|ZP_13385572.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418835551|ref|ZP_13390444.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418842807|ref|ZP_13397616.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418849317|ref|ZP_13404050.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855220|ref|ZP_13409878.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418869880|ref|ZP_13424311.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419788669|ref|ZP_14314353.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419791568|ref|ZP_14317220.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|262826395|sp|B4SU42.1|RSMH_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|194401856|gb|ACF62078.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|195632559|gb|EDX51013.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|363551218|gb|EHL35537.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363552050|gb|EHL36357.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363570118|gb|EHL54056.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|392616755|gb|EIW99184.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392620431|gb|EIX02800.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392731221|gb|EIZ88450.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392736066|gb|EIZ93233.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392737030|gb|EIZ94191.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392743620|gb|EJA00690.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392747515|gb|EJA04513.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392753487|gb|EJA10417.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392782285|gb|EJA38922.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392782510|gb|EJA39144.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392784040|gb|EJA40649.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392789574|gb|EJA46079.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392789760|gb|EJA46262.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392791619|gb|EJA48088.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392801301|gb|EJA57529.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392803575|gb|EJA59768.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392806520|gb|EJA62618.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392821801|gb|EJA77624.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392821900|gb|EJA77720.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392833731|gb|EJA89342.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 313
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|432379700|ref|ZP_19622675.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE12]
gi|430894309|gb|ELC16598.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE12]
Length = 313
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+ RTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMNRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LPI
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPI 268
>gi|170768458|ref|ZP_02902911.1| S-adenosyl-methyltransferase MraW [Escherichia albertii TW07627]
gi|170122562|gb|EDS91493.1| S-adenosyl-methyltransferase MraW [Escherichia albertii TW07627]
Length = 313
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +L ++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLSEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|161504759|ref|YP_001571871.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|262826357|sp|A9MQD1.1|RSMH_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|160866106|gb|ABX22729.1| hypothetical protein SARI_02882 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 313
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRVLGKLMPGEK 292
>gi|161612464|ref|YP_001586429.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|204927221|ref|ZP_03218423.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|416422937|ref|ZP_11690515.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416429575|ref|ZP_11694637.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416439544|ref|ZP_11700263.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416446801|ref|ZP_11705313.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416454991|ref|ZP_11710616.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416458179|ref|ZP_11712781.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416469118|ref|ZP_11718331.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416474054|ref|ZP_11719935.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416494626|ref|ZP_11728253.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416495592|ref|ZP_11728642.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416547319|ref|ZP_11754491.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416577992|ref|ZP_11770212.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416588082|ref|ZP_11776618.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416592475|ref|ZP_11779285.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416600450|ref|ZP_11784397.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416608925|ref|ZP_11789657.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612840|ref|ZP_11791777.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416620089|ref|ZP_11795470.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416627918|ref|ZP_11799238.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416644883|ref|ZP_11807097.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416652359|ref|ZP_11811680.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416657607|ref|ZP_11813823.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416667709|ref|ZP_11818438.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416694671|ref|ZP_11827267.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416708167|ref|ZP_11833029.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416710412|ref|ZP_11834517.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416717446|ref|ZP_11839698.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416726536|ref|ZP_11846597.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416729278|ref|ZP_11847882.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416739404|ref|ZP_11853807.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416748078|ref|ZP_11858480.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416754321|ref|ZP_11861299.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416763493|ref|ZP_11867167.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416767723|ref|ZP_11870099.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418483843|ref|ZP_13052848.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418491437|ref|ZP_13057953.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418495031|ref|ZP_13061476.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418501351|ref|ZP_13067740.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504071|ref|ZP_13070430.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418508730|ref|ZP_13075032.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524166|ref|ZP_13090153.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|452121575|ref|YP_007471823.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|262826399|sp|A9MZL1.1|RSMH_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|161361828|gb|ABX65596.1| hypothetical protein SPAB_00154 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|204323886|gb|EDZ09081.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322615941|gb|EFY12858.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620725|gb|EFY17585.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623923|gb|EFY20760.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627371|gb|EFY24162.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322630678|gb|EFY27442.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638102|gb|EFY34803.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640588|gb|EFY37239.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647729|gb|EFY44214.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648078|gb|EFY44545.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656890|gb|EFY53176.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657400|gb|EFY53672.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663719|gb|EFY59919.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666552|gb|EFY62730.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672289|gb|EFY68401.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676399|gb|EFY72470.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322679508|gb|EFY75553.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686163|gb|EFY82147.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195007|gb|EFZ80193.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323200084|gb|EFZ85171.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201095|gb|EFZ86164.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323212256|gb|EFZ97080.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216561|gb|EGA01287.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323225810|gb|EGA10030.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228648|gb|EGA12777.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236738|gb|EGA20814.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239761|gb|EGA23808.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242191|gb|EGA26220.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249385|gb|EGA33301.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252282|gb|EGA36133.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256628|gb|EGA40358.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262997|gb|EGA46547.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265482|gb|EGA48978.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271730|gb|EGA55148.1| 16S rRNA m(4)C1402 methyltranserfase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|366060072|gb|EHN24337.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366060367|gb|EHN24630.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366061558|gb|EHN25803.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366066865|gb|EHN31023.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366072399|gb|EHN36491.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366079220|gb|EHN43207.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366826963|gb|EHN53873.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207828|gb|EHP21325.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|451910579|gb|AGF82385.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P I LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQIPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|417126855|ref|ZP_11974409.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0246]
gi|386145105|gb|EIG91569.1| S-adenosyl-methyltransferase MraW [Escherichia coli 97.0246]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEA 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|420273053|ref|ZP_14775388.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA40]
gi|425190457|ref|ZP_18587616.1| S-adenosyl-methyltransferase MraW [Escherichia coli NE1487]
gi|390763342|gb|EIO32591.1| S-adenosyl-methyltransferase MraW [Escherichia coli PA40]
gi|408123078|gb|EKH53880.1| S-adenosyl-methyltransferase MraW [Escherichia coli NE1487]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFS IH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSTIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|218687959|ref|YP_002396171.1| S-adenosyl-methyltransferase MraW [Escherichia coli ED1a]
gi|263446439|sp|B7MNU1.1|RSMH_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|218425523|emb|CAR06306.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Escherichia coli ED1a]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +G YID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGTYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|422816100|ref|ZP_16864315.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
M919]
gi|385540499|gb|EIF87320.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
M919]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL + G++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQFGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|16763510|ref|NP_459125.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167550685|ref|ZP_02344442.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167989993|ref|ZP_02571093.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168230399|ref|ZP_02655457.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168234884|ref|ZP_02659942.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168243465|ref|ZP_02668397.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168262195|ref|ZP_02684168.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168820886|ref|ZP_02832886.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194449989|ref|YP_002044090.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469862|ref|ZP_03075846.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194735661|ref|YP_002113138.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248687|ref|YP_002145106.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198243393|ref|YP_002214072.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200386674|ref|ZP_03213286.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205351459|ref|YP_002225260.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207855634|ref|YP_002242285.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224581963|ref|YP_002635761.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911177|ref|ZP_04655014.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|374982352|ref|ZP_09723673.1| rRNA small subunit methyltransferase H [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|374999851|ref|ZP_09724192.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375117549|ref|ZP_09762716.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375122236|ref|ZP_09767400.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378443574|ref|YP_005231206.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448420|ref|YP_005235779.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378698100|ref|YP_005180057.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378953924|ref|YP_005211411.1| hypothetical protein SPUL_0128 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378982661|ref|YP_005245816.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378987526|ref|YP_005250690.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379699341|ref|YP_005241069.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383494942|ref|YP_005395631.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589999|ref|YP_006086399.1| rRNA small subunit methyltransferase H [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|416526265|ref|ZP_11742319.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416533293|ref|ZP_11746261.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416555426|ref|ZP_11758911.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416572545|ref|ZP_11767290.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|417362999|ref|ZP_12136506.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|418787620|ref|ZP_13343421.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418792728|ref|ZP_13348468.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418796533|ref|ZP_13352225.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418843660|ref|ZP_13398456.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418857245|ref|ZP_13411874.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862028|ref|ZP_13416574.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|419731569|ref|ZP_14258479.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419736127|ref|ZP_14262989.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419738085|ref|ZP_14264852.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742811|ref|ZP_14269481.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419746923|ref|ZP_14273487.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421356612|ref|ZP_15806932.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421363047|ref|ZP_15813290.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421366109|ref|ZP_15816314.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421371028|ref|ZP_15821188.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421374864|ref|ZP_15824985.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421379832|ref|ZP_15829897.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386325|ref|ZP_15836339.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421388783|ref|ZP_15838769.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394494|ref|ZP_15844434.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421399150|ref|ZP_15849046.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403578|ref|ZP_15853423.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421406813|ref|ZP_15856625.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421413859|ref|ZP_15863609.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421417140|ref|ZP_15866851.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423030|ref|ZP_15872694.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421426106|ref|ZP_15875735.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421431558|ref|ZP_15881140.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421433687|ref|ZP_15883245.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421439822|ref|ZP_15889303.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421446115|ref|ZP_15895535.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421448974|ref|ZP_15898359.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421571278|ref|ZP_16016956.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421575814|ref|ZP_16021423.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580907|ref|ZP_16026459.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421583753|ref|ZP_16029269.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422024238|ref|ZP_16370730.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422029250|ref|ZP_16375524.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427544520|ref|ZP_18926030.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427560290|ref|ZP_18930794.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427579519|ref|ZP_18935581.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427601156|ref|ZP_18940395.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427625649|ref|ZP_18945301.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427648914|ref|ZP_18950061.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427659448|ref|ZP_18955012.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427664562|ref|ZP_18959759.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427689236|ref|ZP_18964622.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436635499|ref|ZP_20515759.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436700045|ref|ZP_20518341.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436800431|ref|ZP_20524465.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436806620|ref|ZP_20526775.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812817|ref|ZP_20531149.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436830982|ref|ZP_20535692.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852272|ref|ZP_20542593.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855564|ref|ZP_20544722.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436866063|ref|ZP_20551839.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870734|ref|ZP_20554369.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877017|ref|ZP_20558184.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887454|ref|ZP_20563791.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436895184|ref|ZP_20568247.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436902139|ref|ZP_20572968.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436909027|ref|ZP_20575915.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436916818|ref|ZP_20580477.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436924208|ref|ZP_20585356.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436933579|ref|ZP_20589786.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940292|ref|ZP_20594300.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436952734|ref|ZP_20601306.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436958744|ref|ZP_20603279.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436972197|ref|ZP_20610199.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436978564|ref|ZP_20612567.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436993114|ref|ZP_20618101.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437003465|ref|ZP_20621645.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437021434|ref|ZP_20627895.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437036817|ref|ZP_20634096.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437040091|ref|ZP_20634536.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437048662|ref|ZP_20639676.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437060112|ref|ZP_20646275.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064380|ref|ZP_20648401.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437073000|ref|ZP_20652810.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080870|ref|ZP_20657410.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437093620|ref|ZP_20663937.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437109073|ref|ZP_20667614.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437120790|ref|ZP_20671564.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437130464|ref|ZP_20676633.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437138536|ref|ZP_20681060.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437142996|ref|ZP_20684008.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437152851|ref|ZP_20690103.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437159427|ref|ZP_20693919.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437171124|ref|ZP_20700419.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437174995|ref|ZP_20702496.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437182060|ref|ZP_20706792.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437249856|ref|ZP_20715159.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437260648|ref|ZP_20717769.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437269704|ref|ZP_20722925.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437281047|ref|ZP_20728328.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437286935|ref|ZP_20730437.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437317005|ref|ZP_20737943.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437322649|ref|ZP_20738866.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437341140|ref|ZP_20744582.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437384419|ref|ZP_20750589.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437422666|ref|ZP_20755158.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437451844|ref|ZP_20759531.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437459233|ref|ZP_20761085.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437474140|ref|ZP_20766159.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437490048|ref|ZP_20770828.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437501474|ref|ZP_20774322.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437544312|ref|ZP_20782818.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437553988|ref|ZP_20784205.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437576418|ref|ZP_20790587.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437596859|ref|ZP_20796474.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437604182|ref|ZP_20798812.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437615875|ref|ZP_20802453.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437654216|ref|ZP_20810353.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437661677|ref|ZP_20813115.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437674233|ref|ZP_20816386.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437689227|ref|ZP_20820037.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437717258|ref|ZP_20828245.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437732710|ref|ZP_20831718.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437768687|ref|ZP_20835355.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437808931|ref|ZP_20840491.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437816138|ref|ZP_20842498.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|437887750|ref|ZP_20849158.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|437997776|ref|ZP_20854078.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438085750|ref|ZP_20858858.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438098981|ref|ZP_20863103.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438108151|ref|ZP_20866906.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438145614|ref|ZP_20875849.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|440764618|ref|ZP_20943644.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440766329|ref|ZP_20945324.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440773227|ref|ZP_20952126.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445129246|ref|ZP_21380713.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445147843|ref|ZP_21388446.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445155773|ref|ZP_21392493.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445191306|ref|ZP_21399814.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445225862|ref|ZP_21403652.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445328226|ref|ZP_21412890.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445352788|ref|ZP_21420795.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445358237|ref|ZP_21422501.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|20139016|sp|Q8ZRU8.1|RSMH_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826349|sp|B5F7V6.1|RSMH_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826360|sp|B5FI64.1|RSMH_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826371|sp|B5R2L6.1|RSMH_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826385|sp|B5RH56.1|RSMH_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826391|sp|B4TJ79.1|RSMH_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826413|sp|C0Q5H8.1|RSMH_SALPC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826460|sp|B4TXH0.1|RSMH_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|16418619|gb|AAL19084.1| putative S-adenosyl methionine adenyltransferase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|194408293|gb|ACF68512.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456226|gb|EDX45065.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711163|gb|ACF90384.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197212390|gb|ACH49787.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197292032|gb|EDY31382.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197937909|gb|ACH75242.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603772|gb|EDZ02317.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205271240|emb|CAR36028.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324445|gb|EDZ12284.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205331448|gb|EDZ18212.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335013|gb|EDZ21777.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205337535|gb|EDZ24299.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205342387|gb|EDZ29151.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348778|gb|EDZ35409.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206707437|emb|CAR31710.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466490|gb|ACN44320.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245353|emb|CBG23142.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267991798|gb|ACY86683.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301156748|emb|CBW16223.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911089|dbj|BAJ35063.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321222306|gb|EFX47378.1| rRNA small subunit methyltransferase H [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323128440|gb|ADX15870.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|326621816|gb|EGE28161.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326626486|gb|EGE32829.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332987073|gb|AEF06056.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353078069|gb|EHB43828.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353600852|gb|EHC56621.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|357204535|gb|AET52581.1| hypothetical protein SPUL_0128 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|363558330|gb|EHL42523.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363560243|gb|EHL44390.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363568577|gb|EHL52555.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363573097|gb|EHL56984.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|380461763|gb|AFD57166.1| S-adenosyl-methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381291127|gb|EIC32377.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381292873|gb|EIC34047.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381303567|gb|EIC44594.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381313192|gb|EIC53981.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381320439|gb|EIC61041.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383797043|gb|AFH44125.1| rRNA small subunit methyltransferase H [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392765877|gb|EJA22661.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392766681|gb|EJA23454.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392771402|gb|EJA28123.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392816416|gb|EJA72344.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392835192|gb|EJA90790.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392836936|gb|EJA92511.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|395988295|gb|EJH97452.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395990937|gb|EJI00063.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395993531|gb|EJI02625.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|396004799|gb|EJI13780.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396005649|gb|EJI14626.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396007121|gb|EJI16080.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396013231|gb|EJI22119.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396014944|gb|EJI23828.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396019189|gb|EJI28047.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396028365|gb|EJI37126.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396028496|gb|EJI37256.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396032982|gb|EJI41698.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396038288|gb|EJI46928.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396038706|gb|EJI47341.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043025|gb|EJI51639.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396052417|gb|EJI60924.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396055202|gb|EJI63693.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396061614|gb|EJI70036.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396063533|gb|EJI71924.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396069068|gb|EJI77412.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396071205|gb|EJI79531.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|402518578|gb|EJW25952.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402520699|gb|EJW28039.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402520993|gb|EJW28332.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402531654|gb|EJW38859.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414024277|gb|EKT07668.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414024657|gb|EKT08024.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414026601|gb|EKT09867.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414038528|gb|EKT21237.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414039270|gb|EKT21948.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414043725|gb|EKT26211.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414052945|gb|EKT34968.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414054393|gb|EKT36343.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414058446|gb|EKT40113.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414062375|gb|EKT43697.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414067851|gb|EKT48113.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434938793|gb|ELL45703.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434958692|gb|ELL52223.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434958959|gb|ELL52472.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434969145|gb|ELL61859.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434975807|gb|ELL68081.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982612|gb|ELL74422.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984953|gb|ELL76653.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434992318|gb|ELL83775.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434994384|gb|ELL85734.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|434997249|gb|ELL88503.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435001508|gb|ELL92600.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435009055|gb|ELL99851.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435010515|gb|ELM01280.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435017300|gb|ELM07807.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019926|gb|ELM10354.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435029867|gb|ELM19916.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435032600|gb|ELM22531.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435041087|gb|ELM30839.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435042363|gb|ELM32083.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435046266|gb|ELM35883.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435049439|gb|ELM38966.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435055580|gb|ELM44991.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435055779|gb|ELM45189.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435066158|gb|ELM55248.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435069470|gb|ELM58470.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435073122|gb|ELM62011.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435073488|gb|ELM62361.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435078379|gb|ELM67111.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435087717|gb|ELM76204.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435092009|gb|ELM80382.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435098515|gb|ELM86756.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435100865|gb|ELM89020.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435109054|gb|ELM97009.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111355|gb|ELM99259.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435112200|gb|ELN00077.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435119268|gb|ELN06889.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435125619|gb|ELN13060.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435126474|gb|ELN13869.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435132988|gb|ELN20171.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435141515|gb|ELN28456.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435141873|gb|ELN28803.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435146768|gb|ELN33550.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435149492|gb|ELN36187.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435157235|gb|ELN43696.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435164052|gb|ELN50165.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435165375|gb|ELN51426.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435166322|gb|ELN52310.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435169696|gb|ELN55466.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435171969|gb|ELN57524.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435179461|gb|ELN64609.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435184234|gb|ELN69179.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435194026|gb|ELN78486.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435195396|gb|ELN79788.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435200288|gb|ELN84289.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435201789|gb|ELN85669.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435208685|gb|ELN92091.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435222482|gb|ELO04590.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435224627|gb|ELO06588.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435230882|gb|ELO12147.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435234124|gb|ELO15003.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435238593|gb|ELO19222.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435243766|gb|ELO24022.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435244169|gb|ELO24400.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435249422|gb|ELO29247.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435257680|gb|ELO36960.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435262251|gb|ELO41380.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435264484|gb|ELO43397.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435268162|gb|ELO46775.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435278617|gb|ELO56447.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435282319|gb|ELO59941.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435284276|gb|ELO61772.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435287809|gb|ELO64917.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435299716|gb|ELO75841.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435306841|gb|ELO82071.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435308728|gb|ELO83646.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435318954|gb|ELO91842.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435326136|gb|ELO97970.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435328705|gb|ELP00165.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435333270|gb|ELP04097.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435336070|gb|ELP06103.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|436415966|gb|ELP13879.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436416683|gb|ELP14586.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436423155|gb|ELP20973.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444844100|gb|ELX69346.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444848641|gb|ELX73764.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444853762|gb|ELX78829.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444868046|gb|ELX92712.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444868153|gb|ELX92809.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444873597|gb|ELX97890.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444880355|gb|ELY04434.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444886150|gb|ELY09915.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|238797714|ref|ZP_04641209.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
mollaretii ATCC 43969]
gi|238718466|gb|EEQ10287.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
mollaretii ATCC 43969]
Length = 320
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+EL +++ + + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSELAHYVRELDLVGRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPSRGLSAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGAHEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI ++ P + LP+
Sbjct: 254 RIVKNFIRQRSRGPQVPAGLPL 275
>gi|420257205|ref|ZP_14759971.1| 16S rRNA m(4)C1402 methyltransferase [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|404515350|gb|EKA29119.1| 16S rRNA m(4)C1402 methyltransferase [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 320
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 190/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI N NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNIRN---NGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +++ + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRELDLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRGISA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGISAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|251788242|ref|YP_003002963.1| S-adenosyl-methyltransferase MraW [Dickeya zeae Ech1591]
gi|263446384|sp|C6CJW6.1|RSMH_DICZE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|247536863|gb|ACT05484.1| S-adenosyl-methyltransferase MraW [Dickeya zeae Ech1591]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/283 (50%), Positives = 189/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L+I R NGIYID TFG+GGHS IL LG +GRL+AID+D ++V + N
Sbjct: 10 VLLDEAVNGLSI---RSNGIYIDGTFGRGGHSRLILSHLGPEGRLLAIDRDPQAVEVANT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RFSIIH F+EL ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDARFSIIHGPFSELAEYVEARGLTGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA+ WL A +I V++ +GEERFAK+IA+ IV I P+TRTK L E+
Sbjct: 127 RMDPTRGQSAADWLMKAEADDIAWVLKTFGEERFAKRIARAIVERNRIDPLTRTKALAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++YK+PATR+FQAIRIYIN EL+ + AL L GR+ VISFHSLED
Sbjct: 187 IAAASPIREKYKHPATRSFQAIRIYINSELEEIERALDGALTVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFE----PKMKFLARCKP 504
RIVK FI +++ P + LP+ P +K + + P
Sbjct: 247 RIVKRFIRQHSRGPQVPAGLPLTEAQLRSQGGPTLKSVGKMMP 289
>gi|238752424|ref|ZP_04613901.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
rohdei ATCC 43380]
gi|238709357|gb|EEQ01598.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
rohdei ATCC 43380]
Length = 320
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +V
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPLAVEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+EL +++ + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSELAHYVRELDLVGRIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA+ WL A+ +I V++ +GEERFAK++A+ IV P+TRTK+L ++
Sbjct: 134 RMDPTRGLSAADWLMKASAEDIAWVLKTFGEERFAKRLARAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFRDKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|424935094|ref|ZP_18353466.1| Ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|407809281|gb|EKF80532.1| Ribosomal RNA small subunit methyltransferase H [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL RLG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSRLGAEGRLLAIDRDPQAIAVART 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L + + N+ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSKLAEYVGERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEDDIAWVIKTFGEERFGKRIARAIVERNRIQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKHKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|237813927|ref|YP_002898378.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
MSHR346]
gi|237506330|gb|ACQ98648.1| S-adenosyl-methyltransferase MraW [Burkholderia pseudomallei
MSHR346]
Length = 313
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 185/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG GRLIA DKD ++
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLGDAGRLIAFDKDPRAIETAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPARGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI P +K L R P
Sbjct: 247 LEDRIVKRFLQAHASAPAVDRRLPIRAADRPSPPLKLLGRMFP 289
>gi|417400861|ref|ZP_12157459.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353629585|gb|EHC77358.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
Length = 313
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILAQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|375112994|ref|ZP_09758164.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|322713140|gb|EFZ04711.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
Length = 312
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 9 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 65
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 66 INDPRFSIIHGPFSALADYVAEREFTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 126 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 186 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 246 RIVKRFMREQSRGPQVPAGLPM 267
>gi|62178687|ref|YP_215104.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|68565397|sp|Q57TD8.1|RSMH_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|62126320|gb|AAX64023.1| putative S-adenosyl methionine adenyltransferase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 312
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 9 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 65
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 66 INDPRFSIIHGPFSALADYVAEREFTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 126 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 186 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 246 RIVKRFMREQSRGPQVPAGLPM 267
>gi|420255744|ref|ZP_14758620.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. BT03]
gi|398044457|gb|EJL37275.1| S-adenosyl-methyltransferase MraW [Burkholderia sp. BT03]
Length = 317
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 184/280 (65%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+N L R +GIYID TFG+GGHS +L +LG+ GRLI DKD +++ +
Sbjct: 14 VLLEEAVNALVT---RADGIYIDGTFGRGGHSRAVLAKLGESGRLIGFDKDPLAIATAQQ 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H F L + + + ++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 71 IADPRFEIVHESFASLRDAMSERGVGRVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI++YGEERFA ++AK +V R+ + P+ T +L
Sbjct: 131 MDPTRGESAADWLARATVQEMTEVIRNYGEERFAFQVAKALVARRAESDRLGPLVSTGEL 190
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 191 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 250
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLAR 501
LEDRIVK F+ ++ P +DRRLPI L P +K + R
Sbjct: 251 LEDRIVKRFMQAHSNAPAVDRRLPIRAVDLPSPPLKLIGR 290
>gi|423111483|ref|ZP_17099177.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5243]
gi|423112498|ref|ZP_17100189.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5245]
gi|376376682|gb|EHS89459.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5243]
gi|376390875|gb|EHT03557.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5245]
Length = 313
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSQLADYVGERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEEQLKKLGGRELRALGKLMPGEK 292
>gi|83720235|ref|YP_441658.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis E264]
gi|167580465|ref|ZP_02373339.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis
TXDOH]
gi|167618573|ref|ZP_02387204.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis Bt4]
gi|257137827|ref|ZP_05586089.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis E264]
gi|123537607|sp|Q2SZJ1.1|RSMH_BURTA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|83654060|gb|ABC38123.1| S-adenosyl-methyltransferase MraW [Burkholderia thailandensis E264]
Length = 313
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RL GRLIA DKD ++ +
Sbjct: 10 VLLDEAVDALVT---RPDGVYVDGTFGRGGHSRAVLARLSDAGRLIAFDKDPRAIETASG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I+H+ F + L + ++ G+L DLG+SS Q+++ RGFSF +GPLDMR
Sbjct: 67 IEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPERGFSFRANGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK IV R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPLDSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L+ L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + P +DRRLPI L P +K L R P
Sbjct: 247 LEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFP 289
>gi|253988586|ref|YP_003039942.1| s-adenosyl-l-methionine-dependent methyltransferase [Photorhabdus
asymbiotica]
gi|253780036|emb|CAQ83197.1| s-adenosyl-l-methionine-dependent methyltransferase [Photorhabdus
asymbiotica]
Length = 314
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/285 (49%), Positives = 193/285 (67%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 11 VLLDEAVNGLNI---RKDGIYIDGTFGRGGHSRLILSQLGMEGRLIAIDRDPQAIETAKS 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+EL ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFSIIHGPFSELAHYVENAGLTGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WL A +I V++ +GEERFAK+IAK IV PITRTK L ++
Sbjct: 128 RMDPTHGQSAAEWLMKAEADDIAWVLKTFGEERFAKRIAKAIVTRNQEEPITRTKVLADL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++YK+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 188 IAQASPVKEKYKHPATRSFQAIRIYINSELEEIEQALDGALQVLAPRGRLSVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPK----MKFLARCKPKK 506
RIVK FI N++ P + LP+ + + +K + + KP +
Sbjct: 248 RIVKRFIRHNSRGPQVPAGLPLTEEQLKAQGGRSLKSIGKMKPSE 292
>gi|420378387|ref|ZP_14877892.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 225-75]
gi|391307976|gb|EIQ65703.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 225-75]
Length = 313
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIACAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|330859314|emb|CBX69661.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
enterocolitica W22703]
Length = 320
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 190/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +++ + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRELDLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRGISA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGISAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|336248727|ref|YP_004592437.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter aerogenes KCTC
2190]
gi|444353139|ref|YP_007389283.1| rRNA small subunit methyltransferase H [Enterobacter aerogenes
EA1509E]
gi|334734783|gb|AEG97158.1| 16S rRNA m(4)C1402 methyltranserfase [Enterobacter aerogenes KCTC
2190]
gi|443903969|emb|CCG31743.1| rRNA small subunit methyltransferase H [Enterobacter aerogenes
EA1509E]
Length = 313
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPNGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPTAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSQLADYVAERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKHKHPATRTFQAVRIWVNSELEEIEQALKSSLGVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|24111527|ref|NP_706037.1| 16S rRNA m(4)C1402 methyltransferase [Shigella flexneri 2a str.
301]
gi|30061649|ref|NP_835820.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2a str. 2457T]
gi|384541660|ref|YP_005725721.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Shigella
flexneri 2002017]
gi|415859870|ref|ZP_11533983.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2a str. 2457T]
gi|417699858|ref|ZP_12349006.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-218]
gi|417721105|ref|ZP_12369960.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-304]
gi|417726427|ref|ZP_12375177.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-671]
gi|417731485|ref|ZP_12380160.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2747-71]
gi|417736913|ref|ZP_12385527.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 4343-70]
gi|420339552|ref|ZP_14841090.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-404]
gi|42559469|sp|Q83SN7.1|RSMH_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|24050285|gb|AAN41744.1| putative apolipoprotein [Shigella flexneri 2a str. 301]
gi|30039891|gb|AAP15625.1| putative apolipoprotein [Shigella flexneri 2a str. 2457T]
gi|281599444|gb|ADA72428.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Shigella
flexneri 2002017]
gi|313646535|gb|EFS10996.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2a str. 2457T]
gi|332762256|gb|EGJ92523.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2747-71]
gi|332762643|gb|EGJ92908.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 4343-70]
gi|332764928|gb|EGJ95156.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-671]
gi|333009116|gb|EGK28572.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-218]
gi|333022474|gb|EGK41712.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-304]
gi|391275454|gb|EIQ34243.1| S-adenosyl-methyltransferase MraW [Shigella flexneri K-404]
Length = 313
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEE FAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEEHFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|375258972|ref|YP_005018142.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|397655945|ref|YP_006496647.1| rRNA small subunit methyltransferase H [Klebsiella oxytoca E718]
gi|402844937|ref|ZP_10893284.1| S-adenosyl-methyltransferase MraW [Klebsiella sp. OBRC7]
gi|423106423|ref|ZP_17094124.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5242]
gi|365908450|gb|AEX03903.1| 16S rRNA m(4)C1402 methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|376377860|gb|EHS90627.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5242]
gi|394344583|gb|AFN30704.1| rRNA small subunit methyltransferase H [Klebsiella oxytoca E718]
gi|402272537|gb|EJU21755.1| S-adenosyl-methyltransferase MraW [Klebsiella sp. OBRC7]
Length = 313
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 135/286 (47%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSQLADYVGERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRVEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEEQLKKLGGRELRALGKLMPGEK 292
>gi|317493287|ref|ZP_07951709.1| S-adenosyl-methyltransferase MraW [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918680|gb|EFV40017.1| S-adenosyl-methyltransferase MraW [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 314
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 198/283 (69%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LN+ R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++ +
Sbjct: 11 VLLDEAVNGLNL---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAAE 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+++ +++ ++ +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFSIIHGPFSDMATYVRELGLEGQINGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A E +I V++ +GEERFAK+IA+ IV + P+TRT +L +
Sbjct: 128 RMDPTRGLSAAEWLMKAEEEDIAWVLKTFGEERFAKRIARAIVERNRLEPMTRTHELATL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L+ +GR+ VISFHSLED
Sbjct: 188 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALNGALEILSPEGRLSVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
RIVK FI +++ P + +P+ K+K L + KP
Sbjct: 248 RIVKQFIRHHSRGPQVPAGIPLTEAQLRSQGGRKLKALGKMKP 290
>gi|417741567|ref|ZP_12390124.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2930-71]
gi|332768872|gb|EGJ99051.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 2930-71]
Length = 312
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 9 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 65
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 66 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEE FAK+IA+ IV P+TRTK+L E+
Sbjct: 126 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEEHFAKRIARAIVERNREQPMTRTKELAEV 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 186 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 246 RIVKRFMRENSRGPQVPAGLPM 267
>gi|110804146|ref|YP_687666.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 5 str. 8401]
gi|424836613|ref|ZP_18261250.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 5a str. M90T]
gi|123147294|sp|Q0T8B5.1|RSMH_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|110613694|gb|ABF02361.1| putative apolipoprotein [Shigella flexneri 5 str. 8401]
gi|383465665|gb|EID60686.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 5a str. M90T]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEE FAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEEHFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|107021630|ref|YP_619957.1| S-adenosyl-methyltransferase MraW [Burkholderia cenocepacia AU
1054]
gi|123245314|sp|Q1BZH1.1|RSMH_BURCA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|105891819|gb|ABF74984.1| methyltransferase [Burkholderia cenocepacia AU 1054]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 186/285 (65%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+ +D TFG+GGHS +L RL GRLIA DKD ++
Sbjct: 10 VLLDEAVESLVT---RPDGVCVDGTFGRGGHSRAVLARLASAGRLIAFDKDPRAIETAQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI+H+ F + L ++K+ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IEDARFSIVHDSFASMRDALAARGVEKVSGVLLDLGVSSPQVDDPARGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA++WLA A+ + +VI+DYGEERFA +IAK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKALVARRAESDRLGPLDTTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI++NQEL +L + L L GR+VVISFHS
Sbjct: 187 AQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLDAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKK 506
LEDRIVK F+ + P +DRRLPI L P +K ++R P +
Sbjct: 247 LEDRIVKRFMQAHASAPAVDRRLPIRAVDLPSPPLKIISRQFPSE 291
>gi|418513510|ref|ZP_13079740.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366081871|gb|EHN45811.1| 16S rRNA m(4)C1402 methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKDLAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|417631998|ref|ZP_12282224.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_MHI813]
gi|345368149|gb|EGX00156.1| S-adenosyl-methyltransferase MraW [Escherichia coli STEC_MHI813]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+ RTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMIRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|423118637|ref|ZP_17106321.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5246]
gi|376400703|gb|EHT13314.1| ribosomal RNA small subunit methyltransferase H [Klebsiella oxytoca
10-5246]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVSERGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VTAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|390576315|ref|ZP_10256385.1| 16S rRNA m(4)C1402 methyltransferase [Burkholderia terrae BS001]
gi|389931654|gb|EIM93712.1| 16S rRNA m(4)C1402 methyltransferase [Burkholderia terrae BS001]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 184/280 (65%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+N L R +GIYID TFG+GGHS +L +LG+ GRLI DKD +++ +
Sbjct: 10 VLLEEAVNALVT---RADGIYIDGTFGRGGHSRAVLAKLGESGRLIGFDKDPLAIATAQQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I+H F L + + + ++ G+L DLG+SS Q+++ RGFSF DGPLDMR
Sbjct: 67 IADPRFEIVHESFASLRDAMSERGVGRVSGVLLDLGVSSPQVDDPERGFSFRADGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS----ITPITRTKQL 402
MD TRG SA+ WLA AT + +VI++YGEERFA ++AK +V R+ + P+ T +L
Sbjct: 127 MDPTRGESAADWLARATVQEMTEVIRNYGEERFAFQVAKALVARRAESDRLGPLVSTGEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I+ ++ ++ K+PATRTFQAIRI+INQEL L + L+ L GR+VVISFHS
Sbjct: 187 AQIVANVVKTREKGKDPATRTFQAIRIHINQELAELQVVLEAALSLLEQGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLAR 501
LEDRIVK F+ ++ P +DRRLPI L P +K + R
Sbjct: 247 LEDRIVKRFMQAHSNAPAVDRRLPIRAVDLPSPPLKLIGR 286
>gi|222154908|ref|YP_002555047.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli LF82]
gi|387615427|ref|YP_006118449.1| S-adenosyl-methyltransferase MraW [Escherichia coli O83:H1 str. NRG
857C]
gi|433196646|ref|ZP_20380586.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE94]
gi|222031913|emb|CAP74651.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli LF82]
gi|312944688|gb|ADR25515.1| S-adenosyl-methyltransferase MraW [Escherichia coli O83:H1 str. NRG
857C]
gi|431726830|gb|ELJ90598.1| ribosomal RNA small subunit methyltransferase H [Escherichia coli
KTE94]
Length = 313
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSII+ F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIYGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|387880643|ref|YP_006310945.1| S-adenosyl-methyltransferase MraW [Escherichia coli Xuzhou21]
gi|386794101|gb|AFJ27135.1| S-adenosyl-methyltransferase MraW [Escherichia coli Xuzhou21]
Length = 313
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+A D+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLANDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|197265544|ref|ZP_03165618.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197243799|gb|EDY26419.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 313
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|339998140|ref|YP_004729023.1| hypothetical protein SBG_0109 [Salmonella bongori NCTC 12419]
gi|339511501|emb|CCC29204.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 313
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAAEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPKVPAGIPM 268
>gi|16759115|ref|NP_454732.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29140665|ref|NP_804007.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213052857|ref|ZP_03345735.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213426162|ref|ZP_03358912.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213585689|ref|ZP_03367515.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213858022|ref|ZP_03384993.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|20139004|sp|Q8Z9H4.1|RSMH_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|25302091|pir||AE0517 conserved hypothetical protein STY0140 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501405|emb|CAD01277.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136289|gb|AAO67856.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 313
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|409248535|ref|YP_006884376.1| putative S-adenosyl methionine adenyltransferase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|320084363|emb|CBY94156.1| putative S-adenosyl methionine adenyltransferase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 346
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 43 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 99
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 100 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 159
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 160 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 219
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 220 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 279
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 280 RIVKRFMREQSRGPQVPAGLPM 301
>gi|213612818|ref|ZP_03370644.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 304
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 1 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 57
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 58 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 118 RMDPTRGQSAAEWLQRAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 178 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGGRLSIISFHSLED 237
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 238 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 283
>gi|399019274|ref|ZP_10721423.1| dinuclear metal center protein, YbgI/SA1388 family [Herbaspirillum
sp. CF444]
gi|398098421|gb|EJL88708.1| dinuclear metal center protein, YbgI/SA1388 family [Herbaspirillum
sp. CF444]
Length = 256
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 169/228 (74%), Gaps = 10/228 (4%)
Query: 497 KFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILV 556
K+LA + LNI +Y DYCPNGLQVEGR+ I ++V+GVTAS LI+ AV++ ADAILV
Sbjct: 13 KYLA-----QTLNITQYRDYCPNGLQVEGRAEIGLVVSGVTASQALIEAAVELKADAILV 67
Query: 557 HHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTR 616
HHGYFW+GE++ ++G ++KRL+ L+ + INL+AYHLPLD HP+LGNNAQLA+ L+
Sbjct: 68 HHGYFWRGEDARVIGTRQKRLKALLTHDINLFAYHLPLDGHPELGNNAQLARQLSLVGEE 127
Query: 617 RFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTG 676
RF + +GW+G + + T+ DL I R++G++P++IGD ++ I ++GWCTG
Sbjct: 128 RFCDDKLGWLGSV-----QAEANVATVGDLARLIERRLGRQPLLIGDPDQAIGKVGWCTG 182
Query: 677 AAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AQ L DAI G + YISGEISE TV+++RE+GVAY AAGHHATERY
Sbjct: 183 GAQGFLGDAIAAGASVYISGEISEQTVHLARETGVAYIAAGHHATERY 230
>gi|378958267|ref|YP_005215753.1| ribosomal RNA small subunit methyltransferase H [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|374352139|gb|AEZ43900.1| Ribosomal RNA small subunit methyltransferase H [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
Length = 313
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMHDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|237654092|ref|YP_002890406.1| S-adenosyl-methyltransferase MraW [Thauera sp. MZ1T]
gi|237625339|gb|ACR02029.1| S-adenosyl-methyltransferase MraW [Thauera sp. MZ1T]
Length = 311
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 188/277 (67%), Gaps = 4/277 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +G Y+D TFG+GGHS +L+RLG +GRLIA D+D +++ G
Sbjct: 10 VLLSEAVDALAI---RADGFYVDGTFGRGGHSRAVLQRLGPQGRLIAFDRDPLAIAAGQG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+R +++H+ F+ LD L + ++ +DG+L DLG+SS Q+++ RG SF D PLDMR
Sbjct: 67 VGDARLTLVHSAFSALDDELARLGVQAVDGVLLDLGVSSPQLDDAARGMSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG + ++WLA A+ I +VI++YGEERFA IAK I + R+ + T QL ++
Sbjct: 127 MDTSRGQTVAEWLAEASVGQITEVIREYGEERFAHAIAKAIANARAGGAVATTGQLAALV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
K++R + ++PATRTFQA+RI+INQEL+ LS L + +L GR+ VISFHSLEDR
Sbjct: 187 EKAVRTREPGQHPATRTFQALRIFINQELEELSRVLPVCVSRLRPGGRLAVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC 502
IVK F+ ++ P + RRLP+ L P+++ + +
Sbjct: 247 IVKRFMRDESRPPVLPRRLPVRAADLPAPRLQLVGKA 283
>gi|289826154|ref|ZP_06545266.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 279
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|213647633|ref|ZP_03377686.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 293
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|365837162|ref|ZP_09378542.1| S-adenosyl-methyltransferase MraW [Hafnia alvei ATCC 51873]
gi|364562740|gb|EHM40574.1| S-adenosyl-methyltransferase MraW [Hafnia alvei ATCC 51873]
Length = 314
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 198/283 (69%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LN+ R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++ +
Sbjct: 11 VLLDEAVNGLNL---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAAE 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSIIH F+++ +++ ++ +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFSIIHGPFSDMATYVRELGLEGQINGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A E +I V++ +GEERFAK+IA+ IV + P+TRT +L +
Sbjct: 128 RMDPTRGLSAAEWLMKAEEEDIAWVLKTFGEERFAKRIARAIVERNRLEPMTRTHELATL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L+ +GR+ +ISFHSLED
Sbjct: 188 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALNGALEILSPEGRLSIISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
RIVK FI +++ P + +P+ K+K L + KP
Sbjct: 248 RIVKQFIRHHSRGPQVPAGIPLTEAQLRSQGGRKLKALGKMKP 290
>gi|332160404|ref|YP_004296981.1| S-adenosyl-methyltransferase MraW [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664634|gb|ADZ41278.1| S-adenosyl-methyltransferase MraW [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 303
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/261 (51%), Positives = 188/261 (72%), Gaps = 4/261 (1%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++ I
Sbjct: 1 MLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKSI 57
Query: 288 TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
TD RFSI+H F++L +++ + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDMR
Sbjct: 58 TDPRFSIVHGPFSDLAHYVRELDLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDMR 117
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRGISA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++I
Sbjct: 118 MDPTRGISAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADLI 177
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+ +++K+PATR+FQAIRIYIN EL+ + L + L +GR+ VISFHSLEDR
Sbjct: 178 ANASPFREKHKHPATRSFQAIRIYINSELEEIERTLDGALEVLAPEGRLSVISFHSLEDR 237
Query: 467 IVKNFINFNTKIPHIDRRLPI 487
IVKNFI +++ P + LP+
Sbjct: 238 IVKNFIRHHSRGPQVPAGLPL 258
>gi|365846610|ref|ZP_09387112.1| S-adenosyl-methyltransferase MraW [Yokenella regensburgei ATCC
43003]
gi|364573742|gb|EHM51229.1| S-adenosyl-methyltransferase MraW [Yokenella regensburgei ATCC
43003]
Length = 313
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALGDYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVIKTFGEERFGKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + +YK+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKYKHPATRTFQAVRIWVNSELEEIEQALKSSLDVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|22127508|ref|NP_670931.1| S-adenosyl-methyltransferase MraW [Yersinia pestis KIM10+]
gi|45443369|ref|NP_994908.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Microtus
str. 91001]
gi|51595030|ref|YP_069221.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis IP
32953]
gi|108809545|ref|YP_653461.1| S-adenosyl-methyltransferase MraW [Yersinia pestis Antiqua]
gi|108810578|ref|YP_646345.1| S-adenosyl-methyltransferase MraW [Yersinia pestis Nepal516]
gi|150260418|ref|ZP_01917146.1| S-adenosyl-methyltransferase [Yersinia pestis CA88-4125]
gi|153947578|ref|YP_001402352.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis IP
31758]
gi|162419065|ref|YP_001607303.1| S-adenosyl-methyltransferase MraW [Yersinia pestis Angola]
gi|165928201|ref|ZP_02224033.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937803|ref|ZP_02226364.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008805|ref|ZP_02229703.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212069|ref|ZP_02238104.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401265|ref|ZP_02306765.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167422048|ref|ZP_02313801.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426442|ref|ZP_02318195.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470126|ref|ZP_02334830.1| S-adenosyl-methyltransferase MraW [Yersinia pestis FV-1]
gi|170025741|ref|YP_001722246.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis
YPIII]
gi|186894036|ref|YP_001871148.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis
PB1/+]
gi|218927743|ref|YP_002345618.1| S-adenosyl-methyltransferase MraW [Yersinia pestis CO92]
gi|229837062|ref|ZP_04457227.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis Pestoides
A]
gi|229840435|ref|ZP_04460594.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843023|ref|ZP_04463173.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900770|ref|ZP_04515894.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis Nepal516]
gi|270487860|ref|ZP_06204934.1| S-adenosyl-methyltransferase MraW [Yersinia pestis KIM D27]
gi|294502635|ref|YP_003566697.1| S-adenosyl-methyltransferase [Yersinia pestis Z176003]
gi|384121069|ref|YP_005503689.1| S-adenosyl-methyltransferase [Yersinia pestis D106004]
gi|384124947|ref|YP_005507561.1| S-adenosyl-methyltransferase [Yersinia pestis D182038]
gi|384137466|ref|YP_005520168.1| 16S rRNA m(4)C1402 methyltranserfase [Yersinia pestis A1122]
gi|384416409|ref|YP_005625771.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420545036|ref|ZP_15043209.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-01]
gi|420550345|ref|ZP_15047953.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-02]
gi|420555796|ref|ZP_15052803.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-03]
gi|420561475|ref|ZP_15057753.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-04]
gi|420566481|ref|ZP_15062268.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-05]
gi|420572148|ref|ZP_15067417.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-06]
gi|420577420|ref|ZP_15072176.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-07]
gi|420582826|ref|ZP_15077108.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-08]
gi|420587933|ref|ZP_15081713.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-09]
gi|420593250|ref|ZP_15086502.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-10]
gi|420598929|ref|ZP_15091587.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-11]
gi|420604505|ref|ZP_15096561.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-12]
gi|420609787|ref|ZP_15101357.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-13]
gi|420615053|ref|ZP_15106040.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-14]
gi|420620512|ref|ZP_15110807.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-15]
gi|420625548|ref|ZP_15115374.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-16]
gi|420630700|ref|ZP_15120051.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-19]
gi|420635884|ref|ZP_15124683.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-25]
gi|420641476|ref|ZP_15129727.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-29]
gi|420646555|ref|ZP_15134384.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-32]
gi|420652255|ref|ZP_15139498.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-34]
gi|420657688|ref|ZP_15144398.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-36]
gi|420663037|ref|ZP_15149171.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-42]
gi|420668062|ref|ZP_15153717.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-45]
gi|420673316|ref|ZP_15158496.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-46]
gi|420678819|ref|ZP_15163503.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-47]
gi|420684054|ref|ZP_15168207.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-48]
gi|420689237|ref|ZP_15172809.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-52]
gi|420695054|ref|ZP_15177893.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-53]
gi|420700327|ref|ZP_15182484.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-54]
gi|420706474|ref|ZP_15187380.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-55]
gi|420711749|ref|ZP_15192161.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-56]
gi|420717120|ref|ZP_15196911.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-58]
gi|420722763|ref|ZP_15201724.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-59]
gi|420728405|ref|ZP_15206744.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-60]
gi|420733513|ref|ZP_15211345.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-61]
gi|420738954|ref|ZP_15216258.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-63]
gi|420744183|ref|ZP_15220920.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-64]
gi|420750106|ref|ZP_15225920.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-65]
gi|420755189|ref|ZP_15230434.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-66]
gi|420761257|ref|ZP_15235288.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-71]
gi|420766415|ref|ZP_15239955.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-72]
gi|420771457|ref|ZP_15244467.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-76]
gi|420776769|ref|ZP_15249256.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-88]
gi|420782276|ref|ZP_15254084.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-89]
gi|420787706|ref|ZP_15258849.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-90]
gi|420793171|ref|ZP_15263775.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-91]
gi|420798323|ref|ZP_15268401.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-92]
gi|420803706|ref|ZP_15273247.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-93]
gi|420808892|ref|ZP_15277943.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-94]
gi|420814686|ref|ZP_15283132.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-95]
gi|420819821|ref|ZP_15287788.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-96]
gi|420824902|ref|ZP_15292330.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-98]
gi|420830697|ref|ZP_15297561.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-99]
gi|420835499|ref|ZP_15301889.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-100]
gi|420840661|ref|ZP_15306570.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-101]
gi|420846252|ref|ZP_15311629.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-102]
gi|420851592|ref|ZP_15316383.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-103]
gi|420857171|ref|ZP_15321087.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-113]
gi|421761974|ref|ZP_16198774.1| 16S rRNA m(4)C1402 methyltransferase [Yersinia pestis INS]
gi|20139012|sp|Q8ZIF7.1|RSMH_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|85542907|sp|Q66EL3.1|RSMH_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|122979342|sp|Q1C206.1|RSMH_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|123246757|sp|Q1CMN5.1|RSMH_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263504671|sp|A7FM74.1|RSMH_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263504678|sp|B2K4D8.1|RSMH_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263504680|sp|A9R132.1|RSMH_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263504693|sp|B1JK89.1|RSMH_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|21960606|gb|AAM87182.1|AE013965_9 putative apolipoprotein [Yersinia pestis KIM10+]
gi|45438238|gb|AAS63785.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Yersinia pestis biovar
Microtus str. 91001]
gi|51588312|emb|CAH19920.1| S-adenosyl-dependent methyl transferase [Yersinia
pseudotuberculosis IP 32953]
gi|108774226|gb|ABG16745.1| hypothetical protein YPN_0413 [Yersinia pestis Nepal516]
gi|108781458|gb|ABG15516.1| hypothetical protein YPA_3554 [Yersinia pestis Antiqua]
gi|115346354|emb|CAL19226.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149289826|gb|EDM39903.1| S-adenosyl-methyltransferase [Yersinia pestis CA88-4125]
gi|152959073|gb|ABS46534.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis IP
31758]
gi|162351880|gb|ABX85828.1| S-adenosyl-methyltransferase MraW [Yersinia pestis Angola]
gi|165914215|gb|EDR32831.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Orientalis str. IP275]
gi|165919812|gb|EDR37113.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992144|gb|EDR44445.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166206815|gb|EDR51295.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960185|gb|EDR56206.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049290|gb|EDR60698.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054540|gb|EDR64348.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752275|gb|ACA69793.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis
YPIII]
gi|186697062|gb|ACC87691.1| S-adenosyl-methyltransferase MraW [Yersinia pseudotuberculosis
PB1/+]
gi|229682109|gb|EEO78201.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis Nepal516]
gi|229689899|gb|EEO81958.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696801|gb|EEO86848.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706005|gb|EEO92014.1| S-adenosyl-dependent methyltransferase protein with activity on
membrane-located substrates [Yersinia pestis Pestoides
A]
gi|262360665|gb|ACY57386.1| S-adenosyl-methyltransferase [Yersinia pestis D106004]
gi|262364611|gb|ACY61168.1| S-adenosyl-methyltransferase [Yersinia pestis D182038]
gi|270336364|gb|EFA47141.1| S-adenosyl-methyltransferase MraW [Yersinia pestis KIM D27]
gi|294353094|gb|ADE63435.1| S-adenosyl-methyltransferase [Yersinia pestis Z176003]
gi|320016913|gb|ADW00485.1| S-adenosyl-methyltransferase MraW [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852595|gb|AEL71148.1| 16S rRNA m(4)C1402 methyltranserfase [Yersinia pestis A1122]
gi|391432082|gb|EIQ93560.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-01]
gi|391433139|gb|EIQ94506.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-02]
gi|391435760|gb|EIQ96786.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-03]
gi|391448104|gb|EIR07950.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-04]
gi|391448873|gb|EIR08646.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-05]
gi|391451522|gb|EIR11010.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-06]
gi|391464175|gb|EIR22491.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-07]
gi|391465747|gb|EIR23907.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-08]
gi|391467835|gb|EIR25775.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-09]
gi|391481247|gb|EIR37804.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-10]
gi|391482046|gb|EIR38527.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-12]
gi|391482151|gb|EIR38615.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-11]
gi|391496432|gb|EIR51382.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-13]
gi|391496933|gb|EIR51837.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-15]
gi|391500566|gb|EIR55057.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-14]
gi|391512083|gb|EIR65430.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-16]
gi|391513787|gb|EIR66967.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-19]
gi|391515778|gb|EIR68735.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-25]
gi|391527558|gb|EIR79464.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-29]
gi|391530364|gb|EIR81948.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-34]
gi|391531770|gb|EIR83233.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-32]
gi|391544703|gb|EIR94886.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-36]
gi|391546271|gb|EIR96280.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-42]
gi|391547047|gb|EIR96982.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-45]
gi|391560866|gb|EIS09456.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-46]
gi|391562004|gb|EIS10466.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-47]
gi|391564045|gb|EIS12292.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-48]
gi|391576189|gb|EIS22785.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-52]
gi|391576868|gb|EIS23363.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-53]
gi|391588404|gb|EIS33439.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-55]
gi|391590964|gb|EIS35604.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-54]
gi|391592216|gb|EIS36676.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-56]
gi|391605387|gb|EIS48281.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-60]
gi|391606791|gb|EIS49479.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-58]
gi|391607639|gb|EIS50218.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-59]
gi|391619709|gb|EIS60948.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-61]
gi|391620614|gb|EIS61749.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-63]
gi|391628854|gb|EIS68865.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-64]
gi|391631191|gb|EIS70852.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-65]
gi|391642557|gb|EIS80818.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-71]
gi|391645288|gb|EIS83181.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-72]
gi|391647524|gb|EIS85145.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-66]
gi|391654980|gb|EIS91766.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-76]
gi|391661807|gb|EIS97816.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-88]
gi|391666662|gb|EIT02092.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-89]
gi|391668450|gb|EIT03682.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-90]
gi|391672657|gb|EIT07447.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-91]
gi|391686071|gb|EIT19536.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-93]
gi|391687601|gb|EIT20893.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-92]
gi|391688835|gb|EIT22022.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-94]
gi|391700218|gb|EIT32333.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-95]
gi|391703568|gb|EIT35307.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-96]
gi|391704309|gb|EIT35977.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-98]
gi|391714511|gb|EIT45156.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-99]
gi|391719917|gb|EIT49982.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-100]
gi|391720429|gb|EIT50451.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-101]
gi|391731110|gb|EIT59852.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-102]
gi|391733559|gb|EIT61924.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-103]
gi|391737123|gb|EIT65039.1| S-adenosyl-methyltransferase MraW [Yersinia pestis PY-113]
gi|411178296|gb|EKS48308.1| 16S rRNA m(4)C1402 methyltransferase [Yersinia pestis INS]
Length = 320
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D E++ +
Sbjct: 17 VLLDEAVKGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPEAIEAAKQ 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L ++ + + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRDLDLVGRIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPSRGLSAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFRDKHKHPATRSFQAIRIYINSELEEIERALDGAHEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|238754428|ref|ZP_04615783.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
ruckeri ATCC 29473]
gi|238707257|gb|EEP99619.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
ruckeri ATCC 29473]
Length = 304
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 1 MLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 57
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F+EL +++ + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 58 ITDPRFSIVHGPFSELAHYVRELDLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RGISA++WL A +I V++ +GEERFAK++A+ IV P+TRT +L +
Sbjct: 118 RMDPSRGISAAEWLMKAGADDIAWVLKTFGEERFAKRLARAIVERNLTQPMTRTTELANL 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ + L GR+ VISFHSLED
Sbjct: 178 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALEGALEVLAPAGRLSVISFHSLED 237
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI ++ P + LP+
Sbjct: 238 RIVKNFIRNQSRGPKVPAGLPL 259
>gi|82775489|ref|YP_401836.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae Sd197]
gi|309787242|ref|ZP_07681854.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 1617]
gi|88909218|sp|Q32K10.1|RSMH_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|81239637|gb|ABB60347.1| putative apolipoprotein [Shigella dysenteriae Sd197]
gi|308924820|gb|EFP70315.1| S-adenosyl-methyltransferase MraW [Shigella dysenteriae 1617]
Length = 313
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTCGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|238761549|ref|ZP_04622524.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
kristensenii ATCC 33638]
gi|238700063|gb|EEP92805.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Yersinia
kristensenii ATCC 33638]
Length = 320
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPQAIEAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +++ + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRELDLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA+ WL A +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGLSAADWLMKAGADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|238022305|ref|ZP_04602731.1| hypothetical protein GCWU000324_02212 [Kingella oralis ATCC 51147]
gi|237866919|gb|EEP67961.1| hypothetical protein GCWU000324_02212 [Kingella oralis ATCC 51147]
Length = 324
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 179/256 (69%), Gaps = 6/256 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ LNI+ NGIY+D TFG+GGHS IL +LG+KGRL+ DKD +++++
Sbjct: 15 VLLNEAVDALNIQE---NGIYVDGTFGRGGHSRLILSKLGEKGRLVVFDKDPQAIAVARD 71
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+R S++HN F+ L + + KIDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 72 LAAQDARVSVVHNGFSHFQAALDELGVAKIDGALFDLGISSPQIDDASRGFSFRFDAPLD 131
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG SA+ WLA A+E I +VI++YGEERF++ IA+ IV R TPI T +L +
Sbjct: 132 MRMDTTRGQSAADWLAVASEDEINEVIKNYGEERFSRAIARAIVAQRGETPIDTTSKLAK 191
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I + +R +R ++PATRTFQAIRI+IN+EL + L ++LN+ GR+ VI+FHSLE
Sbjct: 192 IAAQCVRTRERGQDPATRTFQAIRIFINRELDEIQAVLPQAVERLNLGGRLAVIAFHSLE 251
Query: 465 DRIVKNFI-NFNTKIP 479
DR+VK FI + T P
Sbjct: 252 DRLVKQFIRQYATHAP 267
>gi|290476461|ref|YP_003469366.1| S-adenosyl-dependent methyltransferase [Xenorhabdus bovienii
SS-2004]
gi|289175799|emb|CBJ82602.1| S-adenosyl-dependent methyl transferase [Xenorhabdus bovienii
SS-2004]
Length = 314
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/285 (48%), Positives = 193/285 (67%), Gaps = 8/285 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG GRLIAID+D +++
Sbjct: 11 VLLDEAVNGLNI---RENGIYIDGTFGRGGHSRLILSQLGADGRLIAIDRDPQAIEAAKA 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI H F+EL +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFSITHGPFSELATYIEEAGLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV ITRT++L E+
Sbjct: 128 RMDPTRGQSATEWLMKAEADDIAWVLKTFGEERFAKRIARAIVARNQEGQITRTRELAEL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 188 IAQASPVKEKHKHPATRSFQAIRIYINSELEEIERALNGALQVLAPQGRLSVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPK----MKFLARCKPKK 506
RIVK FI +++ P + LP+ + + +K + + KP +
Sbjct: 248 RIVKRFIRQHSRGPQVPAGLPLTETQLKAQGGRSLKSIGKLKPSE 292
>gi|146310292|ref|YP_001175366.1| S-adenosyl-methyltransferase MraW [Enterobacter sp. 638]
gi|263447009|sp|A4W6I5.1|RSMH_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145317168|gb|ABP59315.1| S-adenosyl-methyltransferase MraW [Enterobacter sp. 638]
Length = 313
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFS +H F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSFVHGPFSALADYVSERDLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLLTAEEADIAWVIKTFGEERFGKRIARGIVERNRIEPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + +ALK L GR+ +ISFHSLED
Sbjct: 187 VTAATPVKDKFKHPATRTFQAVRIWVNSELEEIELALKSSLGVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|378578132|ref|ZP_09826812.1| S-adenosyl-methyltransferase [Pantoea stewartii subsp. stewartii
DC283]
gi|377819241|gb|EHU02321.1| S-adenosyl-methyltransferase [Pantoea stewartii subsp. stewartii
DC283]
Length = 313
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/283 (48%), Positives = 192/283 (67%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI+ +GIYID TFG+GGHS IL +LG G+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNIKE---DGIYIDGTFGRGGHSLLILAQLGANGKLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L + + ++ +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IKDPRFSIVHGPFSALAEYVAERELAGQIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGHSAAEWLMQAEEADIAFVLKTYGEERFAKRIARAIVERNRDQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI+IN EL+ + ALK L +GR+ VISFHSLED
Sbjct: 187 IAAATPVKDKFKHPATRSFQAIRIWINSELEEIDTALKGAVDVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIY----NYLFEPKMKFLARCKP 504
R+VK F+ ++ P + LP+ N L ++K L + P
Sbjct: 247 RLVKRFMRDQSRGPQVPHGLPMTEQQLNALGGRQLKLLGKMVP 289
>gi|283783869|ref|YP_003363734.1| S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter
rodentium ICC168]
gi|282947323|emb|CBG86868.1| S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter
rodentium ICC168]
Length = 313
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + N+ +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALAEYVAERNLTGRIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL +A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQSAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPKVPAGIPM 268
>gi|429108876|ref|ZP_19170646.1| rRNA small subunit methyltransferase H [Cronobacter malonaticus
507]
gi|426310033|emb|CCJ96759.1| rRNA small subunit methyltransferase H [Cronobacter malonaticus
507]
Length = 313
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVRERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK + L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVEVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|188532894|ref|YP_001906691.1| S-adenosyl-methyltransferase MraW [Erwinia tasmaniensis Et1/99]
gi|263447020|sp|B2VD83.1|RSMH_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|188027936|emb|CAO95793.1| S-adenosyl-methyltransferase MraW [Erwinia tasmaniensis Et1/99]
Length = 313
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI++ +GIYID TFG+GGHS IL +LG+ GRL AID+D ++++ +
Sbjct: 10 VLLDEAVNGLNIKS---DGIYIDGTFGRGGHSRLILSQLGEHGRLYAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF+IIH F+ L ++ +K KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFTIIHGPFSALAEYAEERGLKGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTRGQSAAEWLLKAEESDIAFVLKTFGEERFAKRIARAIVERNREQPMTRTKELADV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IYAATPVKDKFKHPATRSFQAIRIWVNSELEEIEQALKGALSALTAGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P I LP+
Sbjct: 247 RIVKRFMREQSRGPQIPHGLPM 268
>gi|291615182|ref|YP_003525339.1| S-adenosyl-methyltransferase MraW [Sideroxydans lithotrophicus
ES-1]
gi|291585294|gb|ADE12952.1| S-adenosyl-methyltransferase MraW [Sideroxydans lithotrophicus
ES-1]
Length = 308
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/261 (49%), Positives = 182/261 (69%), Gaps = 3/261 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L + + +GIY+D TFG+GGHS ILE+LG++GRL+A+DKD +V+ +
Sbjct: 10 VLLNEAVEALRV---KADGIYVDCTFGRGGHSRLILEKLGERGRLVALDKDPMAVAAARE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF + H+ F L +L+ I+K+DG+L DLG+SS Q+++E RGFSF D PLDMR
Sbjct: 67 IGDARFQLQHSGFEHLGEVLRGLGIEKVDGVLLDLGVSSPQLDDESRGFSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG +A++WLA A E + +VI+DYGEERFA++IA+ IV R I TKQL +I+
Sbjct: 127 MDTSRGQTAAEWLATADEGELAEVIRDYGEERFARQIARAIVAARQERAILTTKQLSDIV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+ +R + KNPATRTFQA+RIYIN+EL+ L L L GR+ VISFHSLEDR
Sbjct: 187 AQCVRTREPGKNPATRTFQAVRIYINRELEELESVLPQCVDHLKAGGRMAVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPI 487
+VK+F+ + + + +PI
Sbjct: 247 MVKHFMRDMAQGDKLPKNVPI 267
>gi|425068828|ref|ZP_18471944.1| ribosomal RNA small subunit methyltransferase H [Proteus mirabilis
WGLW6]
gi|404598728|gb|EKA99196.1| ribosomal RNA small subunit methyltransferase H [Proteus mirabilis
WGLW6]
Length = 315
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 203/300 (67%), Gaps = 15/300 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + +GIYID TFG+GGHS IL +LG++GRLIAID+D +++++ N+
Sbjct: 11 VLLDEAVNGLNI---KPSGIYIDGTFGRGGHSRLILSQLGEQGRLIAIDRDPQAIAVANE 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ ++ + + + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFSIIHGPFSNIEHYINELGLSGKVDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV-HYRSITPITRTKQLVE 404
RMD T G SA++WL NA E +I V++ +GEERFAK+IA+ IV ++ P+TRTKQL +
Sbjct: 128 RMDPTTGQSAAQWLMNAEEDDITWVLKTFGEERFAKRIARAIVARNKTEEPLTRTKQLAD 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I ++ +R+K+PATR+FQAIRIYIN EL + ALK L GR+ VISFHSLE
Sbjct: 188 LISEASPVKERHKHPATRSFQAIRIYINSELDEVEKALKGAVSILAPAGRLSVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DR+VK FI +K P + +P L E ++K L + + P G++VE
Sbjct: 248 DRLVKRFIRDESKGPVVPAGIP----LTEEQIKALGSAR------LSSIHKMKPTGVEVE 297
>gi|197285925|ref|YP_002151797.1| S-adenosyl-methyltransferase [Proteus mirabilis HI4320]
gi|227356432|ref|ZP_03840820.1| S-adenosyl-methyltransferase [Proteus mirabilis ATCC 29906]
gi|425071636|ref|ZP_18474742.1| ribosomal RNA small subunit methyltransferase H [Proteus mirabilis
WGLW4]
gi|262824977|sp|B4F119.1|RSMH_PROMH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|194683412|emb|CAR44158.1| S-adenosyl-methyltransferase [Proteus mirabilis HI4320]
gi|227163542|gb|EEI48463.1| S-adenosyl-methyltransferase [Proteus mirabilis ATCC 29906]
gi|404598494|gb|EKA98964.1| ribosomal RNA small subunit methyltransferase H [Proteus mirabilis
WGLW4]
Length = 315
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 203/300 (67%), Gaps = 15/300 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + +GIYID TFG+GGHS IL +LG++GRLIAID+D +++++ N+
Sbjct: 11 VLLDEAVNGLNI---KPSGIYIDGTFGRGGHSRLILSQLGEQGRLIAIDRDPQAIAVANE 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ ++ + + + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFSIIHGPFSNIEHYINELGLSGKVDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV-HYRSITPITRTKQLVE 404
RMD T G SA++WL NA E +I V++ +GEERFAK+IA+ IV ++ P+TRTKQL +
Sbjct: 128 RMDPTTGQSAAQWLMNAEEDDITWVLKTFGEERFAKRIARAIVARNKTEEPLTRTKQLAD 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I ++ +R+K+PATR+FQAIRIYIN EL + ALK L GR+ VISFHSLE
Sbjct: 188 LISEASPVKERHKHPATRSFQAIRIYINSELDEIEKALKGAVSILAPAGRLSVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DR+VK FI +K P + +P L E ++K L + + P G++VE
Sbjct: 248 DRLVKRFIRDESKGPVVPAGIP----LTEEQIKALGSAR------LSSIHKMKPTGVEVE 297
>gi|302877570|ref|YP_003846134.1| S-adenosyl-methyltransferase MraW [Gallionella capsiferriformans
ES-2]
gi|302580359|gb|ADL54370.1| S-adenosyl-methyltransferase MraW [Gallionella capsiferriformans
ES-2]
Length = 311
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 188/284 (66%), Gaps = 14/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I + +GIY+D TFG+GGHS IL++LG GRLIA+DKD +VS G +
Sbjct: 10 VLLAEAVEALAI---KPDGIYLDCTFGRGGHSALILQQLGANGRLIALDKDMTAVSHGLE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
D+RF ++H+ FT L +L++ ++++DGIL DLG+SS Q++ RGFSF D PLDMR
Sbjct: 67 WQDARFKMVHSGFTHLAEVLRELGVERVDGILLDLGVSSPQLDEAARGFSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG +A++WL A E + +VI+DYGEERFAK+IA+ I+ R I PI T QLVE++
Sbjct: 127 MDNSRGPTAAQWLETADEGLLTEVIRDYGEERFAKQIARAIIVAREIQPIQTTGQLVELV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
K++R + KNPATRTFQAIRIY+NQEL+ L L L GR+ VISFHSLEDR
Sbjct: 187 GKTVRTRETGKNPATRTFQAIRIYLNQELEELKQVLPQCVTHLKPGGRLAVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNI 510
+VK+FI + R +PI A PK KLN+
Sbjct: 247 MVKHFIRDMNDADKLPRNVPIR-----------ASEVPKGKLNL 279
>gi|317046889|ref|YP_004114537.1| S-adenosyl-methyltransferase MraW [Pantoea sp. At-9b]
gi|316948506|gb|ADU67981.1| S-adenosyl-methyltransferase MraW [Pantoea sp. At-9b]
Length = 313
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG G+L+AID+D ++++ +
Sbjct: 10 VLLDEAVNALNI---REDGIYIDGTFGRGGHSRLILAQLGANGQLLAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRFSI+H F+ L + + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IKDSRFSIVHGPFSALAEYVSERGLNGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL +A E +I V++ YGEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLLSAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI+IN EL+ + IALK L GR+ VISFHSLED
Sbjct: 187 IAAATPVKDKFKHPATRSFQAIRIWINSELEEIDIALKGALSVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + +P+
Sbjct: 247 RLVKRFMRDQSRGPQVPAGIPM 268
>gi|386311340|ref|YP_006007396.1| rrna small subunit methyltransferase H [Yersinia enterocolitica
subsp. palearctica Y11]
gi|433551444|ref|ZP_20507486.1| rRNA small subunit methyltransferase H [Yersinia enterocolitica IP
10393]
gi|318607135|emb|CBY28633.1| rrna small subunit methyltransferase H [Yersinia enterocolitica
subsp. palearctica Y11]
gi|431787626|emb|CCO70526.1| rRNA small subunit methyltransferase H [Yersinia enterocolitica IP
10393]
Length = 303
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/261 (51%), Positives = 188/261 (72%), Gaps = 4/261 (1%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
L+EA+N LNI R NGIYID TFG+GGHS IL +LG +G LIAID+D +++ I
Sbjct: 1 MLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGCLIAIDRDPQAIKAAKSI 57
Query: 288 TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
TD RFSI+H F++L +++ + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDMR
Sbjct: 58 TDPRFSIVHGPFSDLAHYVRELDLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDMR 117
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRGISA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++I
Sbjct: 118 MDPTRGISAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVECNLTQPMTRTKELADLI 177
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+ +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLEDR
Sbjct: 178 ANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLEDR 237
Query: 467 IVKNFINFNTKIPHIDRRLPI 487
IVKNFI +++ P + LP+
Sbjct: 238 IVKNFIRHHSRGPQVPAGLPL 258
>gi|418252776|ref|ZP_12878243.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 6603-63]
gi|397902044|gb|EJL18376.1| S-adenosyl-methyltransferase MraW [Shigella flexneri 6603-63]
Length = 313
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WL A E +I V++ YGEE FAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTCGQSAAEWLQTAEEADIAWVLKTYGEEHFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ N++ P + LP+
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPM 268
>gi|261823024|ref|YP_003261130.1| S-adenosyl-methyltransferase MraW [Pectobacterium wasabiae WPP163]
gi|261607037|gb|ACX89523.1| S-adenosyl-methyltransferase MraW [Pectobacterium wasabiae WPP163]
gi|385873471|gb|AFI91991.1| Ribosomal RNA small subunit methyltransferase H [Pectobacterium sp.
SCC3193]
Length = 314
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 182/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R G YID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RSGGTYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAAKA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + D + ++ +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSAMADYVAERGLTGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGLSAAEWLMKAEADDIVWVLKTFGEERFAKRIARAIVERNRTEPMTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLED
Sbjct: 187 IAAASPVREKHKHPATRSFQAIRIYINSELEEIERALEGALSVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + LP+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGLPL 268
>gi|418240068|ref|ZP_12866611.1| 16S rRNA m(4)C1402 methyltransferase [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|351780571|gb|EHB22641.1| 16S rRNA m(4)C1402 methyltransferase [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
Length = 320
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +G LIAID+D +++
Sbjct: 17 VLLDEAVNGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGCLIAIDRDPQAIKAAKS 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L +++ + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRELDLVGRINGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRGISA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPTRGISAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVECNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPEGRLSVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 254 RIVKNFIRHHSRGPQVPAGLPL 275
>gi|374371218|ref|ZP_09629193.1| 16S rRNA m(4)C1402 methyltransferase [Cupriavidus basilensis OR16]
gi|373097255|gb|EHP38401.1| 16S rRNA m(4)C1402 methyltransferase [Cupriavidus basilensis OR16]
Length = 337
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/288 (47%), Positives = 187/288 (64%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS IL RLG G L+A DKD +++
Sbjct: 17 VLLDEAVEALVW---RPDGVYVDGTFGRGGHSRAILARLGPAGALVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F E+ L + GIL DLGISS QI++ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHTSFAEMSAALAGRGT--VAGILLDLGISSPQIDDAERGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRG++A++WLA A E +I +VI+DYGEERFA +IAK +V RS P+T T +L
Sbjct: 132 MDTTRGVTAAQWLAQADEQDIARVIRDYGEERFAVQIAKAVVARRSEPGHGGPLTTTAEL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RI++NQEL +L L + L GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIHVNQELADLESGLSAAYDLLQEGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPI-YNYLFEPKMKFLARCKP 504
LEDRIVK F+ + + P + RR P+ + L +P +K L R KP
Sbjct: 252 LEDRIVKRFMQAHAR-PQQNADPAMRRAPLRADQLPQPTLKLLGRVKP 298
>gi|347538003|ref|YP_004845427.1| S-adenosyl-methyltransferase MraW [Pseudogulbenkiania sp. NH8B]
gi|345641180|dbj|BAK75013.1| S-adenosyl-methyltransferase MraW [Pseudogulbenkiania sp. NH8B]
Length = 320
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 182/258 (70%), Gaps = 8/258 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G+Y+D TFG+GGHS IL +LG GRL+A DKD E+++ G +
Sbjct: 11 VLLSEAVAALAV---RPDGVYVDCTFGRGGHSRLILSQLGPAGRLVAFDKDPEAIAAGER 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RF+++H F L L + I ++DG+L DLG+SS QI++ RGFSF D PLD
Sbjct: 68 LAAEDPRFTLVHEGFETLARELDRLGIARVDGVLMDLGVSSPQIDDARRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG++A++WLA A E +I++VI+ YGEERFA+KIA IV R + P+ T+QL +
Sbjct: 128 MRMDTSRGLTAAEWLATAAEEDIREVIKTYGEERFARKIAAAIVAQRELAPLETTRQLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R + ++PATRTFQAIRIYIN+EL+ L L ++L GR+ VISFHSLE
Sbjct: 188 LVGQNVRTREPGQDPATRTFQAIRIYINRELEELKAVLPQAAQRLAEGGRLAVISFHSLE 247
Query: 465 DRIVKNFI---NFNTKIP 479
DRIVKNF+ + + K+P
Sbjct: 248 DRIVKNFMRDASSDAKLP 265
>gi|71909118|ref|YP_286705.1| S-adenosyl-methyltransferase MraW [Dechloromonas aromatica RCB]
gi|88909196|sp|Q47A96.1|RSMH_DECAR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|71848739|gb|AAZ48235.1| methyltransferase [Dechloromonas aromatica RCB]
Length = 308
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 193/280 (68%), Gaps = 5/280 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I + +G+Y+DATFG+GGHS +IL L + GRL+A+D+D ++++ G +
Sbjct: 10 VLLEEAVGALAI---KADGVYVDATFGRGGHSRRILSELNQNGRLVAVDRDPQAIAAGAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I DSRF ++H F EL + I+ +DG+LFD+G+SS QI++ RGFSF D PLDMR
Sbjct: 67 IDDSRFLLVHRAFGELAEAADEAGIRDVDGVLFDVGVSSPQIDDGERGFSFRYDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD T+G +A++WLA A +I +VI++YGEERFA +IAK++V R PI T Q ++
Sbjct: 127 MDTTQGETAAEWLARAEIRDITEVIRNYGEERFAFQIAKKVVAARLEQPIVTTGQFAALV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++R + ++PATR+FQA+RI+INQEL+ L +AL + L GR+VVISFHSLEDR
Sbjct: 187 RETVRTREPGQDPATRSFQALRIHINQELRQLEVALPQALELLKPGGRLVVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIY-NYLFEPKMKFLAR-CKP 504
IVKNF+ + + + LP+ + L +PK++ + R KP
Sbjct: 247 IVKNFMRDQSIADAMPKSLPLRADQLPKPKLRLVGRPIKP 286
>gi|259907409|ref|YP_002647765.1| S-adenosyl-methyltransferase MraW [Erwinia pyrifoliae Ep1/96]
gi|387870159|ref|YP_005801529.1| S-adenosyl methionine adenyltransferase [Erwinia pyrifoliae DSM
12163]
gi|224963031|emb|CAX54514.1| S-adenosyl-methyltransferase MraW [Erwinia pyrifoliae Ep1/96]
gi|283477242|emb|CAY73151.1| S-adenosyl methionine adenyltransferase [Erwinia pyrifoliae DSM
12163]
Length = 313
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + +GIYID TFG+GGHS IL +LG+ GRL AID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---KPDGIYIDGTFGRGGHSRLILSQLGEHGRLFAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF+IIH F+ L ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFTIIHGPFSALAEYAEQRGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A E +I V++ +GEERFA++IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTRGLSAAEWLLKAEESDISFVLKTFGEERFARRIARAIVERNREQPMTRTKELADV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 IYAATPVKDKFKHPATRSFQAIRIWVNSELEEIEQALKGALSALAAGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPHGLPM 268
>gi|387890550|ref|YP_006320848.1| S-adenosyl-dependent methyltransferase MraW [Escherichia blattae
DSM 4481]
gi|414593737|ref|ZP_11443379.1| ribosomal RNA small subunit methyltransferase H [Escherichia
blattae NBRC 105725]
gi|386925383|gb|AFJ48337.1| S-adenosyl-dependent methyltransferase MraW [Escherichia blattae
DSM 4481]
gi|403195345|dbj|GAB81031.1| ribosomal RNA small subunit methyltransferase H [Escherichia
blattae NBRC 105725]
Length = 313
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 182/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL RLG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RQDGIYIDGTFGRGGHSRLILSRLGPEGRLLAIDRDPQAIEASKA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L ++ +++ +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIVHGPFSALAEYARERDLQGRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SAS WL NA E +I V++ +GEERFAK+IA+ IV P+ RTK+L ++
Sbjct: 127 RMDPTRGQSASDWLLNAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMLRTKELADV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGALDVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPM 268
>gi|385785818|ref|YP_005816927.1| S-adenosyl-methyltransferase MraW [Erwinia sp. Ejp617]
gi|310765090|gb|ADP10040.1| S-adenosyl-methyltransferase MraW [Erwinia sp. Ejp617]
Length = 313
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + +GIYID TFG+GGHS IL +LG+ GRL AID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---KPDGIYIDGTFGRGGHSRLILSQLGEHGRLFAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF+IIH F+ L ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFTIIHGPFSALAEYAEQRGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A E +I V++ +GEERFA++IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTRGLSAAEWLLKAEESDISFVLKTFGEERFARRIARAIVERNREQPMTRTKELADV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 IYAATPVKDKFKHPATRSFQAIRIWVNSELEEIEQALKGALSALAAGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPHGLPM 268
>gi|224826070|ref|ZP_03699173.1| S-adenosyl-methyltransferase MraW [Pseudogulbenkiania ferrooxidans
2002]
gi|224601707|gb|EEG07887.1| S-adenosyl-methyltransferase MraW [Pseudogulbenkiania ferrooxidans
2002]
Length = 320
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 182/258 (70%), Gaps = 8/258 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G+Y+D TFG+GGHS IL +LG GRL+A DKD E+++ G +
Sbjct: 11 VLLSEAVAALAV---RPDGVYVDCTFGRGGHSRLILSQLGPAGRLVAFDKDPEAIAAGER 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RF+++H F L L + I ++DG+L DLG+SS QI++ RGFSF D PLD
Sbjct: 68 LAAEDPRFTLVHEGFETLARELDRLGIARVDGVLMDLGVSSPQIDDARRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG++A++WLA A E +I++VI+ YGEERFA+KIA IV R + P+ T+QL +
Sbjct: 128 MRMDTSRGLTAAEWLATAAEEDIREVIKTYGEERFARKIAAAIVAQRELAPLETTRQLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R + ++PATRTFQAIRIYIN+EL+ L L ++L GR+ VISFHSLE
Sbjct: 188 LVGQNVRTREPGQDPATRTFQAIRIYINRELEELKAVLPQAAQRLAEGGRLAVISFHSLE 247
Query: 465 DRIVKNFI---NFNTKIP 479
DRIVKNF+ + + K+P
Sbjct: 248 DRIVKNFMRDASSDAKLP 265
>gi|398795221|ref|ZP_10555136.1| S-adenosyl-methyltransferase MraW [Pantoea sp. YR343]
gi|398207052|gb|EJM93808.1| S-adenosyl-methyltransferase MraW [Pantoea sp. YR343]
Length = 313
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KG+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGEKGQLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIVHGPFSALAEYVEERGLTGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL +A E +I VI+ YGEERF K+IA+ IV P+TRTK+L +
Sbjct: 127 RMDPTRGQSAAEWLMSAEEADIAFVIKTYGEERFGKRIARAIVERNREQPMTRTKELATV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQAIRI+IN EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKFKHPATRTFQAIRIWINSELEEIDTALKGALSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + +P+
Sbjct: 247 RLVKRFMRDQSRGPQVPAGIPM 268
>gi|429090582|ref|ZP_19153295.1| rRNA small subunit methyltransferase H [Cronobacter dublinensis
1210]
gi|426744932|emb|CCJ79408.1| rRNA small subunit methyltransferase H [Cronobacter dublinensis
1210]
Length = 313
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KGRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEKGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVQERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVSVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|145600350|ref|YP_001164426.1| S-adenosyl-methyltransferase MraW [Yersinia pestis Pestoides F]
gi|263504690|sp|A4TQ91.1|RSMH_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145212046|gb|ABP41453.1| hypothetical protein YPDSF_3095 [Yersinia pestis Pestoides F]
Length = 318
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 187/262 (71%), Gaps = 6/262 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LNI R NGIYID TFG+GGHS IL +LG +GRLIAID+D E++ +
Sbjct: 17 VLLDEAVKGLNI---RDNGIYIDGTFGRGGHSRLILSQLGPEGRLIAIDRDPEAIEAAKQ 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RFSI+H F++L ++ + + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 74 ITDPRFSIVHGPFSDLAHYVRDLDLVGRIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 133
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A+ +I V++ +GEERFAK++AK IV P+TRTK+L ++
Sbjct: 134 RMDPSRGLSAAEWLMKASADDIAWVLKTFGEERFAKRLAKAIVERNLTQPMTRTKELADL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + R K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 194 IANA--SPFRDKHPATRSFQAIRIYINSELEEIERALDGAHEVLAPEGRLSVISFHSLED 251
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI +++ P + LP+
Sbjct: 252 RIVKNFIRHHSRGPQVPAGLPL 273
>gi|417790628|ref|ZP_12438163.1| 16S rRNA m(4)C1402 methyltranserfase [Cronobacter sakazakii E899]
gi|333955272|gb|EGL73039.1| 16S rRNA m(4)C1402 methyltranserfase [Cronobacter sakazakii E899]
Length = 295
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 190/277 (68%), Gaps = 4/277 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVRERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK + L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVEVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
R+VK F+ ++ P + LP+ + + C
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPMTEAQLQKARRSRTAC 283
>gi|407688721|ref|YP_006803894.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407292101|gb|AFT96413.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 313
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 183/263 (69%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L I + NGIYIDATFG+GGHS IL+ LG+ GRLIA D+D +++ +
Sbjct: 12 VLLDECIEALAI---KPNGIYIDATFGRGGHSAHILDELGEHGRLIAFDRDPQAIKAAER 68
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSIIH+ F ++ ++ + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 69 FADDKRFSIIHSPFGDMAEEIEALGLTGKIDGVLMDLGVSSPQLDDAERGFSFLRDGPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ WLANA E +I +VI+++GEE+F K+IA IV+ R TPITRT QL +
Sbjct: 129 MRMDTSRGQSAADWLANAEEQDITQVIKEFGEEKFGKRIAHAIVNTRKETPITRTAQLAK 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II +++ ++K+PATR FQ IRIYIN EL+ L + LK + L +GR+ VISFHSLE
Sbjct: 189 IIDEAVPVKDKFKHPATRAFQGIRIYINAELEQLRVGLKAATQVLAKEGRLAVISFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI +K + LPI
Sbjct: 249 DRLVKRFIKDQSKGKSVPHNLPI 271
>gi|156935398|ref|YP_001439314.1| S-adenosyl-methyltransferase MraW [Cronobacter sakazakii ATCC
BAA-894]
gi|429113989|ref|ZP_19174907.1| rRNA small subunit methyltransferase H [Cronobacter sakazakii 701]
gi|449309521|ref|YP_007441877.1| 16S rRNA m(4)C1402 methyltransferase [Cronobacter sakazakii SP291]
gi|263447014|sp|A7MIE1.1|RSMH_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|156533652|gb|ABU78478.1| hypothetical protein ESA_03256 [Cronobacter sakazakii ATCC BAA-894]
gi|426317118|emb|CCK01020.1| rRNA small subunit methyltransferase H [Cronobacter sakazakii 701]
gi|449099554|gb|AGE87588.1| 16S rRNA m(4)C1402 methyltransferase [Cronobacter sakazakii SP291]
Length = 313
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVRERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK + L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVEVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|398797125|ref|ZP_10556450.1| S-adenosyl-methyltransferase MraW [Pantoea sp. GM01]
gi|398103800|gb|EJL93963.1| S-adenosyl-methyltransferase MraW [Pantoea sp. GM01]
Length = 313
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+KG+LIAID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGEKGQLIAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L +++ + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIVHGPFSALAEYVEERGLTGQIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL +A E +I VI+ YGEERF K+IA+ IV P+TRTK+L +
Sbjct: 127 RMDPTRGQSAAEWLVSAEEADIAFVIKTYGEERFGKRIARAIVERNREQPMTRTKELATV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ ++K+PATRTFQAIRI+IN EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IAAAMPVKDKFKHPATRTFQAIRIWINSELEEIDTALKGALSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + +P+
Sbjct: 247 RLVKRFMRDQSRGPQVPAGIPM 268
>gi|227327098|ref|ZP_03831122.1| S-adenosyl-methyltransferase MraW [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 314
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R GIYID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RSGGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAARA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + + + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSAMAEYVAELGLTGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A +I V++ +GEERFAK+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGLSAAEWLMKAEADDIVWVLKTFGEERFAKRIARAIVERNRLDPMTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLED
Sbjct: 187 IAAASPIREKHKHPATRSFQAIRIYINSELEEIERALEGALSVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + LP+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGLPL 268
>gi|406597774|ref|YP_006748904.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii ATCC
27126]
gi|407684796|ref|YP_006799970.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'English Channel 673']
gi|407701053|ref|YP_006825840.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
gi|406375095|gb|AFS38350.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii ATCC
27126]
gi|407246407|gb|AFT75593.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'English Channel 673']
gi|407250200|gb|AFT79385.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
Length = 313
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 183/263 (69%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L I + NGIYIDATFG+GGHS IL+ LG+ GRLIA D+D +++ +
Sbjct: 12 VLLDECIEALAI---KPNGIYIDATFGRGGHSAHILDALGEHGRLIAFDRDPQAIKAAER 68
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSIIH+ F ++ ++ + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 69 FADDKRFSIIHSPFGDMAEEIEALGLTGKIDGVLMDLGVSSPQLDDAERGFSFLRDGPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ WLANA E +I +VI+++GEE+F K+IA IV+ R TPITRT QL +
Sbjct: 129 MRMDTSRGQSAADWLANAEEQDITQVIKEFGEEKFGKRIAHAIVNTRKETPITRTAQLAK 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II +++ ++K+PATR FQ IRIYIN EL+ L + LK + L +GR+ VISFHSLE
Sbjct: 189 IIDEAVPVKDKFKHPATRAFQGIRIYINAELEQLRVGLKAATQVLAKEGRLAVISFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI +K + LPI
Sbjct: 249 DRLVKRFIKDQSKGKSVPHNLPI 271
>gi|227113994|ref|ZP_03827650.1| S-adenosyl-methyltransferase MraW [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|403060034|ref|YP_006648251.1| S-adenosyl-methyltransferase MraW [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807360|gb|AFR04998.1| S-adenosyl-methyltransferase MraW [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 314
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R GIYID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RSGGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAAKA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + + + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSAMAEYVAELGLTGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A +I V++ +GEERFAK+IA+ IV + P+TRTK+L E+
Sbjct: 127 RMDPTRGLSAAEWLMKAEADDIVWVLKTFGEERFAKRIARAIVERNRLDPMTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLED
Sbjct: 187 IAAASPIREKHKHPATRSFQAIRIYINSELEEIERALEGALSVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + LP+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGLPL 268
>gi|253689961|ref|YP_003019151.1| S-adenosyl-methyltransferase MraW [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|262824751|sp|C6DEV1.1|RSMH_PECCP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|251756539|gb|ACT14615.1| S-adenosyl-methyltransferase MraW [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 314
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 182/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R GIYID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RSGGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAAKA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + + + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSAMAEYVAELGLTGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGLSAAEWLMKAEADDIVWVLKTFGEERFAKRIARAIVERNRTEPMTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLED
Sbjct: 187 IAAASPVREKHKHPATRSFQAIRIYINSELEEIERALEGALSVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + LP+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGLPL 268
>gi|429084651|ref|ZP_19147651.1| rRNA small subunit methyltransferase H [Cronobacter condimenti
1330]
gi|426546338|emb|CCJ73692.1| rRNA small subunit methyltransferase H [Cronobacter condimenti
1330]
Length = 313
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IADPRFSIIHGPFSALADYVCERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPVRDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVSVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|30248986|ref|NP_841056.1| S-adenosyl-methyltransferase MraW [Nitrosomonas europaea ATCC
19718]
gi|42559461|sp|Q82VT1.1|RSMH_NITEU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|30138603|emb|CAD84894.1| Methyltransferase family [Nitrosomonas europaea ATCC 19718]
Length = 317
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 181/266 (68%), Gaps = 6/266 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA + LNI R +GIY+DATFG+GGHS IL RLG+ GRLIA DKD ++S
Sbjct: 5 VLLEEAADALNI---RADGIYVDATFGRGGHSRLILSRLGESGRLIAFDKDPAAISAARS 61
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF +H + ++ L+ ++ +IDGIL DLG+SS Q++ RGFSF DGPLDMR
Sbjct: 62 IRDERFQAVHGSYAQIRTALESLSVSRIDGILLDLGVSSIQLDEASRGFSFRHDGPLDMR 121
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG +A++WLA TE +K+VI+ YGEER+A +IA IV ++ PI T QL EI+
Sbjct: 122 MDSSRGKTAAEWLATVTETELKEVIRTYGEERYAGQIAGAIVMAQTRQPIVTTFQLAEIV 181
Query: 407 LKSIR--GNKR-YKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+R G++ ++PATRTFQAIRI++NQEL+ LS+ L + LN GR+VVISFHSL
Sbjct: 182 AAVVRKFGHRDGRQHPATRTFQAIRIHLNQELEELSVTLPQCVELLNANGRLVVISFHSL 241
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYN 489
EDRIVK F+ + R+LP+ +
Sbjct: 242 EDRIVKRFMRMQAGTDTLPRKLPVRD 267
>gi|255068190|ref|ZP_05320045.1| S-adenosyl-methyltransferase MraW [Neisseria sicca ATCC 29256]
gi|255047532|gb|EET42996.1| S-adenosyl-methyltransferase MraW [Neisseria sicca ATCC 29256]
Length = 317
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 185/259 (71%), Gaps = 5/259 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +GIY+D TFG+GGHS IL RLG +GRLI DKD +++ K
Sbjct: 11 VLLNEAVDALAV---REDGIYVDGTFGRGGHSRLILSRLGSQGRLIVFDKDPQAIEAAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R +++H+ F+ L K +I++IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAEQDGRVTVVHDRFSSFQTTLDKLDIEEIDGALFDLGISSPQIDDGARGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 128 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQRTESPIDTTRKLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 188 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMGRLKQGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDR 483
DRIVK F+ ++ P + R
Sbjct: 248 DRIVKQFVKKYSQHPPLPR 266
>gi|372486941|ref|YP_005026506.1| S-adenosyl-methyltransferase MraW [Dechlorosoma suillum PS]
gi|359353494|gb|AEV24665.1| S-adenosyl-methyltransferase MraW [Dechlorosoma suillum PS]
Length = 319
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 189/278 (67%), Gaps = 5/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L ++ G+Y+D TFG+GGHS ILE LG +GRL+A D+D +++ G
Sbjct: 11 VLLQEAVTALRVDP---RGVYVDGTFGRGGHSRLILESLGPEGRLVAFDRDPLAIAAGAS 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RFS+ H F+E+ +L++ I +DG+L D+G+SS QI+ RGFSF D PLDMR
Sbjct: 68 IQDKRFSLHHTPFSEMGEVLQQQGIGLVDGVLLDIGVSSPQIDEGERGFSFRFDAPLDMR 127
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG +A++WLA A E I +VI+DYGEERFAK+IAK+IV RS P+ T+QL ++
Sbjct: 128 MDTTRGETAAEWLARADETEIAEVIRDYGEERFAKQIAKKIVAARSERPVATTRQLAALV 187
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++R + ++PATR+FQAIRI+INQEL+ LS+AL L GR+ VISFHSLEDR
Sbjct: 188 AEAVRTREPGQDPATRSFQAIRIHINQELQELSLALSQALALLKPGGRLAVISFHSLEDR 247
Query: 467 IVKNFINFNTK-IPHIDRRLPIY-NYLFEPKMKFLARC 502
IVKNF+ + H+ + LP+ + L +P + + +
Sbjct: 248 IVKNFLRDQAEPASHLPKGLPLRADQLPQPTLVLVGKA 285
>gi|421082630|ref|ZP_15543513.1| Ribosomal RNA small subunit methyltransferase H [Pectobacterium
wasabiae CFBP 3304]
gi|401702867|gb|EJS93107.1| Ribosomal RNA small subunit methyltransferase H [Pectobacterium
wasabiae CFBP 3304]
Length = 314
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 182/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R G YID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RSGGTYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAAKA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + + + ++ +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSAMAEYVAERGLTGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGLSAAEWLMKAEADDIVWVLKTFGEERFAKRIARAIVERNRTEPMTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLED
Sbjct: 187 IAAASPVREKHKHPATRSFQAIRIYINSELEEIERALEGALSVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + LP+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGLPL 268
>gi|389842240|ref|YP_006344324.1| S-adenosyl-methyltransferase MraW [Cronobacter sakazakii ES15]
gi|387852716|gb|AFK00814.1| S-adenosyl-methyltransferase MraW [Cronobacter sakazakii ES15]
Length = 313
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID T+G+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTYGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVRERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK + L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVEVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|222112157|ref|YP_002554421.1| s-adenosyl-methyltransferase mraw [Acidovorax ebreus TPSY]
gi|263447303|sp|B9MFS0.1|RSMH_ACIET RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|221731601|gb|ACM34421.1| S-adenosyl-methyltransferase MraW [Acidovorax ebreus TPSY]
Length = 308
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 188/283 (66%), Gaps = 15/283 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + + G ++D TFG+GGHS IL+RLG +GRL+A DKDTE++ +
Sbjct: 10 VLLDEAVHALLGDGDAPAGTFVDGTFGRGGHSRLILQRLGPQGRLVAFDKDTEAIQAAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD+RFSI H F+ L + + G+L DLG+SS QI++ RGFSF DGPLDMR
Sbjct: 70 ITDARFSIRHQGFSHL----GELPAASVSGVLLDLGVSSPQIDDPQRGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S ++WLA+A I +VI+DYGEERFA IAK IV R+ PI+ T +L +I
Sbjct: 126 MDTTRGQSVAEWLADAEAAQIAEVIRDYGEERFAGPIAKAIVARRTERGPISSTAELADI 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + +NPATRTFQA+RI+IN EL+ L AL+ + L GR+VVISFHSLED
Sbjct: 186 VAGAVKTREPGQNPATRTFQALRIFINAELEELQQALEGSLRVLRPGGRLVVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
RIVK FI ++K + DRR P F P ++K L R KP
Sbjct: 246 RIVKQFIAQHSKEVY-DRRAP-----FAPPQPMRLKALERIKP 282
>gi|332142432|ref|YP_004428170.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii str.
'Deep ecotype']
gi|263446686|sp|B4RWY7.1|RSMH_ALTMD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|327552454|gb|AEA99172.1| 16S rRNA m(4)C1402 methyltranserfase [Alteromonas macleodii str.
'Deep ecotype']
Length = 313
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/266 (51%), Positives = 186/266 (69%), Gaps = 11/266 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L I + NGIYIDATFG+GGHS IL+ LG+KGRLIA D+D +++ +
Sbjct: 12 VLLDECIEALAI---KPNGIYIDATFGRGGHSAHILDALGEKGRLIAFDRDPQAIKAAER 68
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSIIH+ F ++ ++ + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 69 FADDKRFSIIHSPFGDMAEEIEALGLTGKIDGVLMDLGVSSPQLDDAERGFSFLRDGPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ WLA+A E +I +VI+++GEE+F K+IA IV+ R TPITRT QL +
Sbjct: 129 MRMDTSRGQSAADWLASAEEQDITQVIKEFGEEKFGKRIAHAIVNTRKDTPITRTAQLAK 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II +++ ++K+PATR FQ IRIYIN EL+ L + LK + L +GR+ VISFHSLE
Sbjct: 189 IIDEAVPVKDKFKHPATRAFQGIRIYINAELEQLRVGLKAATQVLAKEGRLAVISFHSLE 248
Query: 465 DRIVKNFINFNTK---IPHIDRRLPI 487
DR+VK FI +K +PH LPI
Sbjct: 249 DRLVKRFIKDQSKGKVVPH---NLPI 271
>gi|339327317|ref|YP_004687010.1| ribosomal RNA small subunit methyltransferase H [Cupriavidus
necator N-1]
gi|338167474|gb|AEI78529.1| ribosomal RNA small subunit methyltransferase H [Cupriavidus
necator N-1]
Length = 333
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/288 (47%), Positives = 187/288 (64%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG G L+A DKD +++
Sbjct: 17 VLLDEAVDALVW---RPDGVYVDGTFGRGGHSRAVLARLGPDGALVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F + L + G+L DLGISS QI+ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHASFAAMAERLSGRG--HVAGVLLDLGISSPQIDEAARGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV RS PI T L
Sbjct: 132 MDTTRGITAAQWLAQADEQDIARVIRDYGEERFAVQIAKAIVARRSEPGDGGPIATTADL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RI++NQEL++L LK ++ L + GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIHVNQELEDLERGLKAAYELLQVGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + + P D RR P+ L +P ++ L R KP
Sbjct: 252 LEDRIVKRFMAAHAR-PQQDADPALRRAPLRAADLPQPTLRLLGRYKP 298
>gi|113869234|ref|YP_727723.1| S-adenosyl-methyltransferase MraW [Ralstonia eutropha H16]
gi|123032664|sp|Q0K6L6.1|RSMH_RALEH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|113528010|emb|CAJ94355.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 333
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/288 (47%), Positives = 187/288 (64%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG G L+A DKD +++
Sbjct: 17 VLLDEAVDALVW---RPDGVYVDGTFGRGGHSRAVLARLGPDGALVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F + L + G+L DLGISS QI+ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHASFAAMAERLSGRG--HVAGVLLDLGISSPQIDEAARGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV RS PI T L
Sbjct: 132 MDTTRGITAAQWLAQADEQDIARVIRDYGEERFAVQIAKAIVARRSEPGDGGPIATTADL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RI++NQEL++L LK ++ L + GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIHVNQELEDLERGLKAAYELLQVGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + + P D RR P+ L +P ++ L R KP
Sbjct: 252 LEDRIVKRFMAAHAR-PQQDADPALRRAPLRAADLPQPTLRLLGRYKP 298
>gi|260596507|ref|YP_003209078.1| 16S rRNA m(4)C1402 methyltransferase [Cronobacter turicensis z3032]
gi|260215684|emb|CBA28014.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Cronobacter turicensis z3032]
Length = 313
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVRERELQGKIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ VISFHSLED
Sbjct: 187 VAAATPIKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVDVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|419797343|ref|ZP_14322832.1| S-adenosyl-methyltransferase MraW [Neisseria sicca VK64]
gi|385698346|gb|EIG28714.1| S-adenosyl-methyltransferase MraW [Neisseria sicca VK64]
Length = 317
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 184/259 (71%), Gaps = 5/259 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +GIY+D TFG+GGHS IL RLG +GRLI DKD +++ K
Sbjct: 11 VLLNEAVDALAV---REDGIYVDGTFGRGGHSRLILSRLGSQGRLIVFDKDPQAIEAAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R +++H+ F+ L K I++IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAEQDGRVTVVHDGFSSFQTTLDKLGIEEIDGALFDLGISSPQIDDGARGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 128 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQRTESPIDTTRKLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 188 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMGRLKQGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDR 483
DRIVK F+ ++ P + R
Sbjct: 248 DRIVKQFVKKYSQHPPLPR 266
>gi|300313337|ref|YP_003777429.1| hypothetical protein Hsero_4051 [Herbaspirillum seropedicae SmR1]
gi|300076122|gb|ADJ65521.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 254
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 160/219 (73%), Gaps = 6/219 (2%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
+ LN +Y DYCPNGLQVEGR+ + +VTGVTASL LI+ A+ ADAILVHHGYFW+GE
Sbjct: 16 QTLNAAQYRDYCPNGLQVEGRATVGRVVTGVTASLALIEAALQWQADAILVHHGYFWRGE 75
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGW 625
+ ++G K++RL+ L+ N INL+ YHLPLD HP+LGNNAQLA+ L+F T RF N+IGW
Sbjct: 76 DMRVIGQKQRRLKLLLSNDINLFGYHLPLDSHPELGNNAQLARRLDFDATGRFGDNDIGW 135
Query: 626 IGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDA 685
+G R + + T DL I +++G+ P++IGD + + ++ WCTGAAQ +L +A
Sbjct: 136 LG------RCHAPSVKTAADLAMLIEKRLGRMPLLIGDPQQAVGQVAWCTGAAQGMLGEA 189
Query: 686 INEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
I G + YISGEISE TV+++RE+G Y AAGHHATERY
Sbjct: 190 IEAGASVYISGEISEPTVHLARETGTVYLAAGHHATERY 228
>gi|82703617|ref|YP_413183.1| S-adenosyl-methyltransferase MraW [Nitrosospira multiformis ATCC
25196]
gi|123543903|sp|Q2Y630.1|RSMH_NITMU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|82411682|gb|ABB75791.1| methyltransferase [Nitrosospira multiformis ATCC 25196]
Length = 316
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/263 (49%), Positives = 181/263 (68%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + + +GIY+D TFG+GGHS ILERLGK GRLIA D+D + ++G
Sbjct: 10 VLLQEAVEALAL---KPDGIYVDGTFGRGGHSRLILERLGKNGRLIAFDRDPVACAVGRS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
D RF ++H+ ++ L +L++ NI +IDG+L DLG+SS Q+ RGFSF ++GPLDMR
Sbjct: 67 FGDERFCMVHSSYSRLQEVLRQLNIGQIDGVLLDLGVSSPQLEEATRGFSFSMEGPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL--VE 404
MD T G +A++WLA+A+E +++VI++YGEERFAK+IA+ IV R+ P+ T QL +
Sbjct: 127 MDTTEGQTAAQWLASASEVQLEEVIKEYGEERFAKQIARAIVKARARQPLVTTSQLAAIV 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
R + +NPATRTFQAIRIY+NQEL+ LS+AL + L GR+VVISFHSLE
Sbjct: 187 AAAIPARAREPKQNPATRTFQAIRIYLNQELERLSLALPQCVEMLKTGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI + + LP+
Sbjct: 247 DRIVKRFIREGANTDKLPKHLPL 269
>gi|238898853|ref|YP_002924535.1| S-adenosyl-dependent methyl transferase [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|263456095|sp|C4K744.1|RSMH_HAMD5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|229466613|gb|ACQ68387.1| S-adenosyl-dependent methyl transferase [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 311
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/286 (47%), Positives = 198/286 (69%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ LNI+N+ GIYIDATFG+GGHS IL RLG +G+LI+ID+D E+V
Sbjct: 9 VLLYEAVDSLNIQND---GIYIDATFGRGGHSSLILSRLGSQGKLISIDRDPEAVKKAKL 65
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ D RFS I F++L +KK ++ +I+G+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 66 MKDPRFSFIQGSFSDLYHYVKKLDLMGRINGLLFDLGVSSPQLDDAKRGFSFMRDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL N+ V++++GEERF+ ++A+ IV + PI TK+L ++
Sbjct: 126 RMDPSRGLSAAEWLMKVNVENLAWVLKNFGEERFSTRLARAIVERNRLNPIKSTKELADL 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I I +K+PATR+FQAIRIYIN EL+ +S AL + L++ R+ V+SFHSLED
Sbjct: 186 ISHVIPVRNHHKHPATRSFQAIRIYINNELQEISSALNAALEILSLGARLSVVSFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIY----NYLFEPKMKFLARCKPKKK 507
RIVKNFI +++ P I R LP+ +++PK+K + + P +K
Sbjct: 246 RIVKNFIRQHSRGPQILRGLPLTEIQIQSMWQPKLKLIGKTMPSQK 291
>gi|354596158|ref|ZP_09014175.1| Ribosomal RNA small subunit methyltransferase H [Brenneria sp.
EniD312]
gi|353674093|gb|EHD20126.1| Ribosomal RNA small subunit methyltransferase H [Brenneria sp.
EniD312]
Length = 313
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 180/262 (68%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +G YID TFG+GGHS IL +LG +GRL+AID+D ++
Sbjct: 10 VLLDEAVNGLNI---RSDGTYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPLAIEAAGA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALADYMAERGLTGHIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++WL A +I V++ +GEERFAK+IA+ IV I P+TRTK+L E+
Sbjct: 127 RMDPTRGLSAAEWLLKAEAEDIAWVLKTFGEERFAKRIARAIVERNRIEPLTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL L GR+ VISFHSLED
Sbjct: 187 IAAASPIREKHKHPATRSFQAIRIYINSELEEIERALDGALSVLAPHGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + +P+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGMPL 268
>gi|332288560|ref|YP_004419412.1| S-adenosyl-methyltransferase MraW [Gallibacterium anatis UMN179]
gi|330431456|gb|AEC16515.1| S-adenosyl-methyltransferase MraW [Gallibacterium anatis UMN179]
Length = 321
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 189/279 (67%), Gaps = 10/279 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L I + NGIYID TFG+GGHS +IL LG+ GRLIAID+D ++++
Sbjct: 14 VLLNEAVDGLAI---KPNGIYIDGTFGRGGHSRRILSLLGEHGRLIAIDRDPQAIAAAQS 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI H+ F+E++ I +KY I KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 71 IQDPRFSIEHHNFSEINEICEKYQLIGKIDGILLDLGVSSPQLDQAERGFSFMQDGPLDM 130
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS------ITPITRT 399
RMD T+G+SA++WL +E ++ V++ +GEERFAK+IA+ IV + P+TRT
Sbjct: 131 RMDTTKGLSAAQWLQQVSESDLAWVLKTFGEERFAKRIARNIVQFNQQAKLNGTEPLTRT 190
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL ++I +SI +++K+PATR+FQAIRI+IN EL+ L L L +GR+ +IS
Sbjct: 191 LQLAQLIAQSIPLKEKHKHPATRSFQAIRIFINSELEELEKILTAAIDVLAPQGRLSIIS 250
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKF 498
FHSLEDR+VK F+ +K I R LP+ E K
Sbjct: 251 FHSLEDRLVKRFMKKQSKGDDIPRGLPLTEDQIERNQKL 289
>gi|440229446|ref|YP_007343239.1| S-adenosyl-methyltransferase MraW [Serratia marcescens FGI94]
gi|440051151|gb|AGB81054.1| S-adenosyl-methyltransferase MraW [Serratia marcescens FGI94]
Length = 313
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 187/264 (70%), Gaps = 4/264 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+EL +++ ++ +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDPRFNIVHGPFSELSHYVRERGLEGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPSRGQSAAEWLLKAEAEDIAWVLKTFGEERFAKRIARAIVERNKTEPMTRTKELAEL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ +ISFHSLED
Sbjct: 187 IAAASPFKEKHKHPATRSFQAIRIYINSELEEIERALEGALDVLAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYN 489
RIVK F+ +++ + LP+ +
Sbjct: 247 RIVKRFMRHHSRGAQVPAGLPLTD 270
>gi|194290821|ref|YP_002006728.1| s-adenosyl-methyltransferase mraw [Cupriavidus taiwanensis LMG
19424]
gi|263446166|sp|B3R6W7.1|RSMH_CUPTR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|193224656|emb|CAQ70667.1| S-adenosyl-dependent methyl transferase [Cupriavidus taiwanensis
LMG 19424]
Length = 329
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 187/288 (64%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG G L+A DKD +++
Sbjct: 17 VLLDEAVDALVW---RPDGVYVDGTFGRGGHSRAVLARLGPDGALVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F + L + G+L DLGISS QI+ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHASFAAMAERLAGRG--HVAGVLLDLGISSPQIDEAARGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV RS + P+ T L
Sbjct: 132 MDTTRGITAAQWLAQADEQDIARVIRDYGEERFAVQIAKAIVARRSESGDGGPVATTADL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RI++NQEL++L LK + L + GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIHVNQELEDLERGLKAAYDLLQVGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + + P D RR P+ L +P ++ L R KP
Sbjct: 252 LEDRIVKRFMAAHAR-PQQDADPALRRAPLRAADLPQPTLRLLGRYKP 298
>gi|261379351|ref|ZP_05983924.1| S-adenosyl-methyltransferase MraW [Neisseria subflava NJ9703]
gi|284797791|gb|EFC53138.1| S-adenosyl-methyltransferase MraW [Neisseria subflava NJ9703]
Length = 320
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/248 (50%), Positives = 180/248 (72%), Gaps = 5/248 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +GIY+D TFG+GGHS IL RLGK+GRL+ DKD E++++ N+
Sbjct: 12 VLLHEAVDALAI---REDGIYVDGTFGRGGHSRLILSRLGKQGRLVVFDKDPEAIAVANE 68
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++HN F L + I KIDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LAVQDKRVSVVHNGFETFQTALDELGIDKIDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R +PI T++L +
Sbjct: 129 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQREESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVAGRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI 472
DRIVK FI
Sbjct: 249 DRIVKQFI 256
>gi|429119994|ref|ZP_19180687.1| rRNA small subunit methyltransferase H [Cronobacter sakazakii 680]
gi|426325543|emb|CCK11424.1| rRNA small subunit methyltransferase H [Cronobacter sakazakii 680]
Length = 313
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAAAA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ ++ KI+GIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALGDYVRERELQGKINGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL NA E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLRNAEEADIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK + L GR+ VISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKGAVEVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + LP+
Sbjct: 247 RLVKRFMREQSRGPQVPAGLPM 268
>gi|50122745|ref|YP_051912.1| S-adenosyl-methyltransferase MraW [Pectobacterium atrosepticum
SCRI1043]
gi|54036180|sp|Q6D0H5.1|RSMH_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|49613271|emb|CAG76722.1| S-adenosyl-methyltransferase [Pectobacterium atrosepticum SCRI1043]
Length = 314
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 181/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R GIYID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RSGGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAAKA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRFSIIH F+ + D + + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDSRFSIIHGPFSAMADYVAELGLTGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L +
Sbjct: 127 RMDPTRGSSAAEWLMKAEADDIVWVLKTFGEERFAKRIARAIVERNRTEPMTRTKELASL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLED
Sbjct: 187 IAAASPIREKHKHPATRSFQAIRIYINSELEEIERALEGALSVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI ++ P + LP+
Sbjct: 247 RIVKRFIRHQSRGPQVPAGLPL 268
>gi|430809408|ref|ZP_19436523.1| 16S rRNA m(4)C1402 methyltransferase [Cupriavidus sp. HMR-1]
gi|429498095|gb|EKZ96610.1| 16S rRNA m(4)C1402 methyltransferase [Cupriavidus sp. HMR-1]
Length = 325
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/288 (47%), Positives = 186/288 (64%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G Y+D TFG+GGHS +L RLG G L+A DKD +++
Sbjct: 17 VLLDEAVDALVW---RPDGAYVDGTFGRGGHSRAVLARLGPAGTLVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F E+ L + G+L DLGISS QI+ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHASFAEMGDRLAGRG--PVAGVLLDLGISSPQIDEAARGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV R + + T L
Sbjct: 132 MDTTRGITAAEWLAQADEHDIARVIRDYGEERFALQIAKAIVARRRESGDGGALATTSDL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RIYINQEL++L LK ++ L + GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIYINQELEDLERGLKAAYELLQVGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + + P D RR P+ L +P MK L R KP
Sbjct: 252 LEDRIVKRFMQAHAR-PERDADPALRRAPLRAADLPQPTMKLLGRFKP 298
>gi|340361245|ref|ZP_08683677.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
macacae ATCC 33926]
gi|339888837|gb|EGQ78264.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
macacae ATCC 33926]
Length = 317
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 184/259 (71%), Gaps = 5/259 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +GIY+D TFG+GGHS IL RLG +GRLI DKD +++ K
Sbjct: 11 VLLNEAVDALAV---REDGIYVDGTFGRGGHSRLILSRLGSQGRLIVFDKDPQAIEAAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R +++H+ F+ L K I++IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAEQDGRVTVVHDGFSSFQTTLDKLGIEEIDGALFDLGISSPQIDDGARGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 128 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQRTESPIDTTRKLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 188 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMGRLKQGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDR 483
DR+VK F+ ++ P + R
Sbjct: 248 DRLVKQFVKKYSQHPPLPR 266
>gi|226941977|ref|YP_002797051.1| S-adenosyl-methyltransferase MraW [Laribacter hongkongensis HLHK9]
gi|263456276|sp|C1D5M5.1|RSMH_LARHH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|226716904|gb|ACO76042.1| MraW [Laribacter hongkongensis HLHK9]
Length = 317
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 181/277 (65%), Gaps = 5/277 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I R +G+Y+D TFG+GGHS +L RLG GRL+A DKD +++++ +
Sbjct: 10 VLLQEAVEALAI---RPDGVYVDCTFGRGGHSRLVLSRLGPAGRLVAFDKDPQAIAVATE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D R +I+H F LD L + I K+DG+L DLG+SS QI++ RGFSF D PLDMR
Sbjct: 67 LDDPRLTIVHEGFAGLDRELDRLGIDKVDGVLMDLGVSSPQIDDASRGFSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQLVEI 405
MD TRG +A+ WLA A E I+ VI+DYGEERFA IA+ IV R +T T +L +
Sbjct: 127 MDTTRGETAADWLARADEAEIRTVIRDYGEERFAASIARAIVANRLEGQFLTTTGELAAL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +R ++ ++PATRTFQAIRI+IN+EL L L ++L GR+VVI+FHSLED
Sbjct: 187 CARCVRTREKGQDPATRTFQAIRIFINRELDELQAVLPQAVRRLRPGGRLVVIAFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLAR 501
RIVK F+ + P + R LP+ L EP ++ + +
Sbjct: 247 RIVKLFLRDASSPPELPRGLPVRAADLPEPPLRLVGK 283
>gi|349608747|ref|ZP_08888169.1| ribosomal RNA small subunit methyltransferase H [Neisseria sp.
GT4A_CT1]
gi|348611322|gb|EGY60981.1| ribosomal RNA small subunit methyltransferase H [Neisseria sp.
GT4A_CT1]
Length = 317
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 184/259 (71%), Gaps = 5/259 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +GIY+D TFG+GGHS IL RLG +GRLI DKD +++ K
Sbjct: 11 VLLNEAVDALAV---REDGIYVDGTFGRGGHSRLILSRLGSQGRLIVFDKDPQAIEAAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R +++H+ F+ L + I++IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAEQDGRVTVVHDGFSSFQTTLDRLGIEEIDGALFDLGISSPQIDDGARGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 128 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQRTESPIDTTRKLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 188 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMGRLKQGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDR 483
DRIVK F+ ++ P + R
Sbjct: 248 DRIVKQFVKKYSQHPPLPR 266
>gi|94312067|ref|YP_585277.1| 16S rRNA m(4)C1402 methyltransferase [Cupriavidus metallidurans
CH34]
gi|123259838|sp|Q1LIL8.1|RSMH_RALME RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|93355919|gb|ABF10008.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Cupriavidus metallidurans CH34]
Length = 325
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/288 (47%), Positives = 186/288 (64%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G Y+D TFG+GGHS +L RLG G L+A DKD +++
Sbjct: 17 VLLDEAVDALVW---RPDGAYVDGTFGRGGHSRAVLARLGPAGTLVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F E+ L + G+L DLGISS QI+ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHASFAEMGDRLAGRG--PVAGVLLDLGISSPQIDEAARGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV R + + T L
Sbjct: 132 MDTTRGITAAEWLAQADEQDIARVIRDYGEERFALQIAKAIVARRRESGDGGALATTSDL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RIYINQEL++L LK ++ L + GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIYINQELEDLERGLKAAYELLQVGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + + P D RR P+ L +P MK L R KP
Sbjct: 252 LEDRIVKRFMQAHAR-PERDADPALRRAPLRAADLPQPTMKLLGRFKP 298
>gi|293392868|ref|ZP_06637186.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Serratia
odorifera DSM 4582]
gi|291424727|gb|EFE97938.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Serratia
odorifera DSM 4582]
Length = 313
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F++L +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDPRFTIVHGPFSDLSHYVRERELVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTRGQSAAEWLLKAEADDIAWVLKTFGEERFAKRIARAIVERNKTEPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ +ISFHSLED
Sbjct: 187 IADASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ +++ + LP+
Sbjct: 247 RIVKRFMRHHSRGAQVPAGLPL 268
>gi|319639028|ref|ZP_07993786.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Neisseria
mucosa C102]
gi|317399932|gb|EFV80595.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Neisseria
mucosa C102]
Length = 320
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 180/248 (72%), Gaps = 5/248 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +GIY+D TFG+GGHS IL RLG++GRL+ DKD E++++ N+
Sbjct: 12 VLLHEAVDALAI---REDGIYVDGTFGRGGHSRLILSRLGEQGRLVVFDKDPEAIAVANE 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++HN F L + I KIDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LAAQDKRVSVVHNGFETFQTALDELGIDKIDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R +PI T++L +
Sbjct: 129 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQREESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVAGRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI 472
DRIVK FI
Sbjct: 249 DRIVKQFI 256
>gi|261365120|ref|ZP_05978003.1| S-adenosyl-methyltransferase MraW [Neisseria mucosa ATCC 25996]
gi|288566552|gb|EFC88112.1| S-adenosyl-methyltransferase MraW [Neisseria mucosa ATCC 25996]
Length = 317
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 182/259 (70%), Gaps = 5/259 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +GIY+D TFG+GGHS IL RLG +GRLI DKD +++ K
Sbjct: 11 VLLNEAVDALAV---REDGIYVDGTFGRGGHSRLILSRLGSQGRLIVFDKDPQAIEAAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R +++H+ F+ L K I++IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAEQDGRVTVVHDGFSSFQTTLDKLGIEEIDGALFDLGISSPQIDDGARGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA+ W+A A+E ++ +VI++YGEERF+++IA+ IV R+ PI T++L +
Sbjct: 128 MRMDPTRGMSAADWIATASEQDLHEVIKNYGEERFSRQIARAIVAQRAENPIDTTRKLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 188 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMGRLKEGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDR 483
DRIVK F+ ++ P + R
Sbjct: 248 DRIVKQFVKKYSQHPPLPR 266
>gi|300715300|ref|YP_003740103.1| S-adenosyl-methyltransferase MraW [Erwinia billingiae Eb661]
gi|299061136|emb|CAX58243.1| S-adenosyl-methyltransferase MraW [Erwinia billingiae Eb661]
Length = 313
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI++ +GIY+D TFG+GGHS IL +LG+ GRL AID+D ++++ +
Sbjct: 10 VLLDEAVNGLNIKS---DGIYLDGTFGRGGHSRLILSQLGEHGRLYAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF IIH F+ L + + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFQIIHGPFSALADYADELGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T+G SAS+WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTKGQSASQWLLQAEESDIAFVLKTFGEERFAKRIARAIVERNREQPMTRTKELADV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI++N EL+ + ALK L +GR+ VISFHSLED
Sbjct: 187 IYAATPVKDKFKHPATRSFQAIRIWVNSELEEIEQALKGALTALAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + +P+
Sbjct: 247 RIVKRFMREQSRGPQVPAGIPM 268
>gi|34499806|ref|NP_904021.1| S-adenosyl-methyltransferase MraW [Chromobacterium violaceum ATCC
12472]
gi|42559445|sp|Q7NPZ1.1|RSMH_CHRVO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|34105656|gb|AAQ62010.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 320
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 181/258 (70%), Gaps = 8/258 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L I R +G+Y+D TFG+GGHS IL +LG GRLIA DKD E++++ ++
Sbjct: 11 VLLTEAVDALAI---RPDGVYVDCTFGRGGHSRLILSKLGPSGRLIAFDKDPEAIAVADR 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ DSRF+I+HN F L L + + +DG+L DLG+SS QI++ RGFSF D PLD
Sbjct: 68 LAAEDSRFNIVHNGFETLSAELARLGVAGVDGVLMDLGVSSPQIDDGSRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG++A++WLA A E +I++VI+ YGEERFA+KIA IV R +PIT T++L
Sbjct: 128 MRMDTTRGVTAAEWLATADEADIREVIKTYGEERFARKIAAAIVAQRDESPITTTRELAV 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R + ++PATRTFQAIRI++N+EL L L + LN GR+ VISFHSLE
Sbjct: 188 LVGQNVRTREPGQDPATRTFQAIRIFVNRELDELKAVLPQAARLLNEGGRLAVISFHSLE 247
Query: 465 DRIVKNF---INFNTKIP 479
DRIVK + ++ K+P
Sbjct: 248 DRIVKLYLRDVSSEEKLP 265
>gi|339484862|ref|YP_004696648.1| Ribosomal RNA small subunit methyltransferase H [Nitrosomonas sp.
Is79A3]
gi|338807007|gb|AEJ03249.1| Ribosomal RNA small subunit methyltransferase H [Nitrosomonas sp.
Is79A3]
Length = 312
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L I+ +G+Y+DATFG+GGHS IL RLG++GRLIA+D+D +V G
Sbjct: 5 VLLQEAVDALAIKP---DGVYVDATFGRGGHSRLILSRLGEQGRLIALDRDPAAVKSGEA 61
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF I H+ F+ + IL++ I KIDG+L DLG+SS Q+ RGFSF GPLDMR
Sbjct: 62 IADKRFCIRHSSFSGMRQILQEMGITKIDGVLLDLGVSSPQLEEISRGFSFRSAGPLDMR 121
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD + G +A++WLA TE ++ VI++YGEERFA++IA+ I+ R+ PI T QL EII
Sbjct: 122 MDTSSGQTAAEWLATVTEDQLEWVIKEYGEERFARQIARAIIMARTRQPIVTTLQLAEII 181
Query: 407 LKSIRGNKR--YKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
IR +R ++PATR FQAIRIY+NQEL+ LS+ L + LN GR+VVISFHSLE
Sbjct: 182 AAVIRPRQRENMRHPATRAFQAIRIYLNQELEELSLVLPQCVELLNPGGRLVVISFHSLE 241
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DR+VK F+ + R +P+
Sbjct: 242 DRMVKQFMRAGASTDELPRGVPLRE 266
>gi|183599909|ref|ZP_02961402.1| hypothetical protein PROSTU_03430 [Providencia stuartii ATCC 25827]
gi|386742176|ref|YP_006215355.1| S-adenosyl-methyltransferase [Providencia stuartii MRSN 2154]
gi|188022184|gb|EDU60224.1| S-adenosyl-methyltransferase MraW [Providencia stuartii ATCC 25827]
gi|384478869|gb|AFH92664.1| S-adenosyl-methyltransferase [Providencia stuartii MRSN 2154]
Length = 316
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 194/286 (67%), Gaps = 11/286 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIYID TFG+GGHS IL +L ++GRLIAID+D E++ +
Sbjct: 11 VLLDEAVNGLNI---KPNGIYIDGTFGRGGHSRLILSQLNEQGRLIAIDRDPEAIKAAQE 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+ + + + ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFMIKHGPFSAIAEYVEEEGLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQL 402
RMD T+G SA +WL NA +I V++ +GEERFAK+IAK IV H TP+TRT++L
Sbjct: 128 RMDPTKGQSAQQWLMNAQADDIAWVLKTFGEERFAKRIAKAIVERNHNPEETPLTRTREL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I K +R+K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHS
Sbjct: 188 AELIAKVSPIKERHKHPATRSFQAIRIYINSELEEIEQALEGAVSVLAPEGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARCKP 504
LEDR+VK FI N+K P + +P+ L K++ + + KP
Sbjct: 248 LEDRLVKRFIRQNSKGPSVPAGIPLTEAQIRELGVAKLREVGKMKP 293
>gi|448240512|ref|YP_007404565.1| 16S rRNA m(4)C1402 methyltransferase, SAM-dependent [Serratia
marcescens WW4]
gi|445210876|gb|AGE16546.1| 16S rRNA m(4)C1402 methyltransferase, SAM-dependent [Serratia
marcescens WW4]
gi|453064726|gb|EMF05690.1| 16S rRNA m(4)C1402 methyltransferase [Serratia marcescens VGH107]
Length = 313
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+EL +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDPRFTIVHGPFSELSHYVRERELVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + G+SA++WL A +I V++ +GEERFAK+IA+ IV + P+TRTK+L ++
Sbjct: 127 RMDPSTGLSAAEWLMKAEADDIAWVLKTFGEERFAKRIARAIVERNRVEPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ +ISFHSLED
Sbjct: 187 IADASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ +++ + +P+
Sbjct: 247 RIVKRFMRHHSRGAQVPAGIPL 268
>gi|381401416|ref|ZP_09926319.1| 16S rRNA m(4)C1402 methyltransferase [Kingella kingae PYKK081]
gi|380833566|gb|EIC13431.1| 16S rRNA m(4)C1402 methyltransferase [Kingella kingae PYKK081]
Length = 321
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/248 (51%), Positives = 175/248 (70%), Gaps = 5/248 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LNI+ NG Y+D TFG+GGHS IL +LG++GRLI DKD +++ + K
Sbjct: 11 VLLHEAVAALNIQP---NGAYVDGTFGRGGHSRLILSQLGEQGRLIVFDKDPQAIEVAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+R S++HN F + + KIDG LFDLGISS Q+++ RGFSF D PLD
Sbjct: 68 LAQQDARVSVVHNGFATFEAACTNLGLDKIDGALFDLGISSPQVDDGSRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG SA++WLA A+E I +VI++YGEERF+++IA+ IV RS +PI T+QL
Sbjct: 128 MRMDTTRGQSAAEWLAVASEQEIHEVIKNYGEERFSRQIARTIVAQRSESPINTTRQLAA 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I + +R ++R ++PATRTFQAIRI+IN+EL + L +LN+ GR+ VI+FHSLE
Sbjct: 188 ITAQCVRSHERGQDPATRTFQAIRIFINRELDEVEQVLPQVVNRLNVGGRLAVIAFHSLE 247
Query: 465 DRIVKNFI 472
DRIVK F+
Sbjct: 248 DRIVKQFM 255
>gi|73542671|ref|YP_297191.1| S-adenosyl-methyltransferase MraW [Ralstonia eutropha JMP134]
gi|88909215|sp|Q46WY6.1|RSMH_RALEJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|72120084|gb|AAZ62347.1| methyltransferase [Ralstonia eutropha JMP134]
Length = 332
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 184/288 (63%), Gaps = 16/288 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L R +G+Y+D TFG+GGHS +L RLG G L+A DKD +++
Sbjct: 17 VLLDEAVEALVW---RPDGVYVDGTFGRGGHSRAVLARLGPDGALVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F + L + G+L DLGISS QI+ RGFSF +GPLDMR
Sbjct: 74 IQDARFSIEHESFAAMGERLAGRG--HVAGVLLDLGISSPQIDEAARGFSFRFEGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV R P+ T L
Sbjct: 132 MDTTRGITAAEWLAQAEEQDIARVIRDYGEERFAVQIAKAIVARRREPGDGGPLATTADL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ K+++ ++ ++PATRTFQA+RI+INQEL++L LK + L + GR+VVISFHS
Sbjct: 192 AALVAKAVKTREKGQDPATRTFQALRIHINQELEDLERGLKAAYDLLQVGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPIYNY-LFEPKMKFLARCKP 504
LEDRIVK F+ + + P D RR P+ L +P ++ L R KP
Sbjct: 252 LEDRIVKRFMAAHAR-PQQDADPALRRAPLRAADLPQPTLRLLGRVKP 298
>gi|121595969|ref|YP_987865.1| S-adenosyl-methyltransferase MraW [Acidovorax sp. JS42]
gi|263433389|sp|A1WC14.1|RSMH_ACISJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|120608049|gb|ABM43789.1| S-adenosyl-methyltransferase MraW [Acidovorax sp. JS42]
Length = 308
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/283 (48%), Positives = 186/283 (65%), Gaps = 15/283 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + + G ++D TFG+GGHS IL+RLG +GRL+A DKDTE++ +
Sbjct: 10 VLLDEAVHALLGDGDAPAGTFVDGTFGRGGHSRLILQRLGPQGRLVAFDKDTEAIQAAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD+RFSI H F+ L + + G+L DLG+SS QI++ RGFSF DGPLDMR
Sbjct: 70 ITDARFSIRHQGFSHL----GELPAASVSGVLLDLGVSSPQIDDPQRGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S ++WLA+A I +VI+DYGEERFA IAK IV R+ PI T +L +I
Sbjct: 126 MDTTRGQSVAEWLADAETAQIAEVIRDYGEERFAGPIAKAIVARRTERGPIASTAELADI 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + +NPATRTFQA+RI+IN EL+ L AL+ L GR+VVISFHSLED
Sbjct: 186 VAGAVKTREPGQNPATRTFQALRIFINAELEELQQALEGSLHVLRPGGRLVVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
RIVK FI ++K + DRR P F P +++ L R KP
Sbjct: 246 RIVKQFIAQHSKEVY-DRRAP-----FAPPQPMRLRALERIKP 282
>gi|422013382|ref|ZP_16360009.1| S-adenosyl-methyltransferase [Providencia burhodogranariea DSM
19968]
gi|414103339|gb|EKT64916.1| S-adenosyl-methyltransferase [Providencia burhodogranariea DSM
19968]
Length = 316
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 192/288 (66%), Gaps = 11/288 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIYID TFG+GGHS IL +L ++GRLIAID+D E++
Sbjct: 11 VLLDEAVNGLNI---KPNGIYIDGTFGRGGHSRLILSQLNEQGRLIAIDRDPEAIKAAEA 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+ + + + ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFMIKHGPFSAIAEYVEEEGLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQL 402
RMD T+G SA +WL NA +I V++ +GEERFAK+IA+ IV H P+TRT+QL
Sbjct: 128 RMDPTKGQSAEQWLMNAEADDIAWVLKTFGEERFAKRIARAIVERNHNAEEEPLTRTRQL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I K +R+K+PATR+FQAIRIYIN EL+ + AL L +GR+ VISFHS
Sbjct: 188 AELIAKVSPLKERHKHPATRSFQAIRIYINSELEEIERALDGAMSVLAAEGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARCKPKK 506
LEDR+VK FI N+K P + +P+ L K++ + + KP +
Sbjct: 248 LEDRLVKRFIRQNSKGPSVPPGIPLTEAQIRELGAAKLRDIGKMKPSE 295
>gi|320540413|ref|ZP_08040063.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Serratia symbiotica str. Tucson]
gi|320029344|gb|EFW11373.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Serratia symbiotica str. Tucson]
Length = 313
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/252 (50%), Positives = 181/252 (71%), Gaps = 4/252 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NG YID TFG+GGHSC IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGTYIDGTFGRGGHSCLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ L D + ++ + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSALSDYVRERELVGQIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + G+SA++WL A +I V++ +GEERFAK+IA IV + P+TRTKQL ++
Sbjct: 127 RMDPSTGLSAAEWLMKAEADDIAWVLKTFGEERFAKRIACAIVERNRVEPMTRTKQLADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ +ISFHSLED
Sbjct: 187 IAGASPIREKHKHPATRSFQAIRIYINSELEEIECALNGTLEVLAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTK 477
RIVK FI +++
Sbjct: 247 RIVKRFIRHHSR 258
>gi|225077130|ref|ZP_03720329.1| hypothetical protein NEIFLAOT_02185 [Neisseria flavescens
NRL30031/H210]
gi|224951541|gb|EEG32750.1| hypothetical protein NEIFLAOT_02185 [Neisseria flavescens
NRL30031/H210]
Length = 320
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 179/248 (72%), Gaps = 5/248 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +GIY+D TFG+GGHS IL RLG++GRL+ DKD E++++ N+
Sbjct: 12 VLLHEAVDALAI---REDGIYVDGTFGRGGHSRLILSRLGEQGRLVVFDKDPEAIAVANE 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++HN F L + I KIDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LAAQDKRVSVVHNGFETFQTALDELGIDKIDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R +PI T +L +
Sbjct: 129 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQREESPIDTTHKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVAGRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI 472
DRIVK FI
Sbjct: 249 DRIVKQFI 256
>gi|298369646|ref|ZP_06980963.1| S-adenosyl-methyltransferase MraW [Neisseria sp. oral taxon 014
str. F0314]
gi|298282203|gb|EFI23691.1| S-adenosyl-methyltransferase MraW [Neisseria sp. oral taxon 014
str. F0314]
Length = 323
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 180/253 (71%), Gaps = 5/253 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ LNI R +G+Y+D TFG+GGHS IL RLG++GRLI DKD +++ K
Sbjct: 12 VLLNEAVDALNI---RPDGVYVDGTFGRGGHSRLILSRLGEEGRLIVFDKDPQAIVAARK 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++H+ F+ L + I K+DG LFDLG+SS QI+ RGFSF D PLD
Sbjct: 69 LAAYDMRVSVVHDGFSVFQTALDELGIGKVDGALFDLGVSSPQIDEGGRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R +PI T++L +
Sbjct: 129 MRMDPTRGMSAAEWIATASEQDLNEVIKNYGEERFSRQIARAIVAQREESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEIEAVLPQATGRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTK 477
DRIVK FI ++
Sbjct: 249 DRIVKQFIKKQSQ 261
>gi|91776629|ref|YP_546385.1| S-adenosyl-methyltransferase MraW [Methylobacillus flagellatus KT]
gi|123078758|sp|Q1GYZ3.1|RSMH_METFK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|91710616|gb|ABE50544.1| methyltransferase [Methylobacillus flagellatus KT]
Length = 321
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 197/296 (66%), Gaps = 7/296 (2%)
Query: 211 LFCGITYFLALRIMGFL--FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKK 268
+ GI++ A ++ + L EA+ L+I + +G+Y+D TFG+GGHS KILE+LG +
Sbjct: 1 MSAGISHVPAAQVSQHVTVLLEEAVEALSI---KPDGVYVDGTFGRGGHSRKILEKLGAQ 57
Query: 269 GRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQI 328
GRL+A+D+D ++ I D+RF I+H+ F + +L NI+++DG+L DLGISS QI
Sbjct: 58 GRLVALDRDLAAIQAAQGIQDARFKIVHSHFAAMAQVLASLNIQQVDGVLLDLGISSPQI 117
Query: 329 NNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV 388
+ RGFSF DGPLDMRMD +RG +A++++A ATE + +VI++YGEERFAK+IA+ IV
Sbjct: 118 DEGERGFSFRFDGPLDMRMDQSRGQTAAEFIATATEQELTRVIKEYGEERFAKQIARAIV 177
Query: 389 HYRS-ITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFK 447
R+ I+ T QL +I+ ++ + ++PATRTFQA+RI+INQEL+ LS+ L
Sbjct: 178 AQRAGGMDISTTGQLAKIVAGAVPKVEPGQDPATRTFQALRIFINQELEELSLTLPQCLS 237
Query: 448 KLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRRLPI-YNYLFEPKMKFLARC 502
L +GR+ VISFHSLEDRIVK FI ++ P+ + L +P++ + R
Sbjct: 238 LLAPQGRLAVISFHSLEDRIVKRFIRGEQDRDNLPAHFPVRASDLPQPRLVAIGRA 293
>gi|410862645|ref|YP_006977879.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii AltDE1]
gi|410819907|gb|AFV86524.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas macleodii AltDE1]
Length = 313
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/268 (50%), Positives = 185/268 (69%), Gaps = 11/268 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L I + +GIYIDATFG+GGHS IL+ LG+ GRLIA D+D +++ +
Sbjct: 12 VLLDECIEALAI---KPSGIYIDATFGRGGHSAHILKALGENGRLIAFDRDPQAIKAAER 68
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSIIH+ F ++ ++ + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 69 FADDKRFSIIHSPFGDMAEEIEALGLTGKIDGVLMDLGVSSPQLDDAERGFSFLRDGPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ WLA+A E +I +VI+++GEE+F K+IA IV+ R TPITRT QL +
Sbjct: 129 MRMDTSRGQSAADWLASAEEQDITQVIKEFGEEKFGKRIAHAIVNTRQETPITRTAQLAK 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II +++ ++K+PATR FQ IRIYIN EL+ L + LK + L +GR+ VISFHSLE
Sbjct: 189 IIDEAVPVKDKFKHPATRAFQGIRIYINAELEQLRVGLKAATQVLAKEGRLAVISFHSLE 248
Query: 465 DRIVKNFINFNTK---IPHIDRRLPIYN 489
DR+VK FI +K +PH LPI
Sbjct: 249 DRLVKRFIKDQSKGKVVPH---NLPITQ 273
>gi|212712749|ref|ZP_03320877.1| hypothetical protein PROVALCAL_03846 [Providencia alcalifaciens DSM
30120]
gi|422017264|ref|ZP_16363829.1| S-adenosyl-dependent methyltransferase [Providencia alcalifaciens
Dmel2]
gi|212684665|gb|EEB44193.1| hypothetical protein PROVALCAL_03846 [Providencia alcalifaciens DSM
30120]
gi|414105414|gb|EKT66971.1| S-adenosyl-dependent methyltransferase [Providencia alcalifaciens
Dmel2]
Length = 317
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 190/288 (65%), Gaps = 11/288 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIYID TFG+GGHS IL +LG++GRLIAID+D E++ +
Sbjct: 11 VLLDEAVNGLNI---KPNGIYIDGTFGRGGHSRLILSQLGEQGRLIAIDRDPEAIKAAQE 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+ + D + ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 INDPRFMIKHGPFSAIADYVEEEGLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQL 402
RMD TRG SA +WL A +I V++ +GEERF+K+IA+ IV H P+TRT+ L
Sbjct: 128 RMDPTRGQSAQQWLMTAEADDIAWVLKTFGEERFSKRIARAIVERNHNPEEEPLTRTRHL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I K R+K+PATR+FQAIRIYIN EL+ + AL L +GR+ VISFHS
Sbjct: 188 AELIAKVSPIKDRHKHPATRSFQAIRIYINSELEEIEKALNGAMSVLAPEGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARCKPKK 506
LEDR+VK FI N+ P + +P+ L K++ L + KP +
Sbjct: 248 LEDRLVKRFIRQNSTGPSVPAGIPLTEAQIKELGAAKLRALGKMKPSE 295
>gi|383812789|ref|ZP_09968216.1| 16S rRNA m(4)C1402 methyltransferase [Serratia sp. M24T3]
gi|383298199|gb|EIC86506.1| 16S rRNA m(4)C1402 methyltransferase [Serratia sp. M24T3]
Length = 312
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG +GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIEAAKA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L + + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSDLAQYVHERELAGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPSRGYSAAEWLMKAEADDIAWVLKTFGEERFAKRIARAIVDRNREQPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L GR+ VISFHSLED
Sbjct: 187 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGAHEVLAPDGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI +++ P + +P+
Sbjct: 247 RIVKRFIRQHSRGPQVPAGIPM 268
>gi|157368998|ref|YP_001476987.1| S-adenosyl-methyltransferase MraW [Serratia proteamaculans 568]
gi|262826478|sp|A8G9R9.1|RSMH_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157320762|gb|ABV39859.1| S-adenosyl-methyltransferase MraW [Serratia proteamaculans 568]
Length = 313
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NG YID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGTYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L +++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDPRFSIVHGPFSDLSHYVRERELVGQIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + G SAS+WL A +I V++ +GEERFAK+IA+ IV + P+TRTKQL ++
Sbjct: 127 RMDSSSGQSASEWLMKAEADDIAWVLKTFGEERFAKRIARAIVERNQVDPMTRTKQLADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 187 IANASPFRDKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ +++ + +P+
Sbjct: 247 RIVKRFMRHHSRGAQVPAGIPL 268
>gi|329295550|ref|ZP_08252886.1| 16S rRNA m(4)C1402 methyltranserfase [Plautia stali symbiont]
Length = 313
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 184/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG G+L+AID+D ++++ +
Sbjct: 10 VLLDEAVNGLNI---REDGIYIDGTFGRGGHSRLILSQLGAHGQLLAIDRDPQAIAAAAE 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IKDPRFSIVHGPFSALAEYVEERGLTGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD RG SA++WL +A E +I V++ YGEERFAK+IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPRRGQSAAEWLQSAEEADIAFVLKTYGEERFAKRIARAIVERNREQPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI++N EL+ + IALK L GR+ +ISFHSLED
Sbjct: 187 IAAATPVKDKFKHPATRSFQAIRIWLNSELEEIDIALKGALTVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK F+ ++ P + +P+
Sbjct: 247 RLVKRFMRDQSRGPQVPAGIPM 268
>gi|386823137|ref|ZP_10110292.1| 16S rRNA m(4)C1402 methyltransferase [Serratia plymuthica PRI-2C]
gi|386379924|gb|EIJ20706.1| 16S rRNA m(4)C1402 methyltransferase [Serratia plymuthica PRI-2C]
Length = 313
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F++L +++ + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDPRFTIVHGPFSDLSHYVRERELVGQIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + G SAS+WL A +I V++ +GEERFAK+IA+ IV + P+TRTK+L ++
Sbjct: 127 RMDPSSGQSASEWLLKAEAEDIAWVLKTFGEERFAKRIARAIVERNRVEPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ +ISFHSLED
Sbjct: 187 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ +++ + LP+
Sbjct: 247 RIVKRFMRHHSRGAQVPAGLPL 268
>gi|333891914|ref|YP_004465789.1| 16S rRNA m(4)C1402 methyltransferase [Alteromonas sp. SN2]
gi|332991932|gb|AEF01987.1| 16S rRNA m(4)C1402 methyltranserfase [Alteromonas sp. SN2]
Length = 313
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/288 (47%), Positives = 187/288 (64%), Gaps = 7/288 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L I + NGIYIDATFG+GGHS IL+ LG G LIA D+D +++ +
Sbjct: 12 VLLDECIEALAI---KPNGIYIDATFGRGGHSAHILDALGSDGTLIAFDRDPQAIEAAKR 68
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D SRF IIH+ F ++ ++ + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 69 FADDSRFRIIHSPFGDMAEEIEALGLTGKIDGVLMDLGVSSPQLDDAERGFSFLRDGPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ WLA A E +I +VI+++GEE+F K+IA IV+ R TPITRT QL
Sbjct: 129 MRMDTSRGESAADWLARAEEQDITQVIKEFGEEKFGKRIAHAIVNTRETTPITRTAQLAA 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I +++ ++K+PATR FQ IRIYIN EL+ L LK + L +GR+ VISFHSLE
Sbjct: 189 LIDEAVPVKDKFKHPATRAFQGIRIYINAELEQLRTGLKAATQVLAKEGRLAVISFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPK--MKFLARCKPKKKLNI 510
DR+VK FI +K + LPI + +K L+R +L I
Sbjct: 249 DRLVKRFIKDQSKGKSVPHNLPITQAEIDADKVLKALSRAIKPSELEI 296
>gi|241760229|ref|ZP_04758325.1| S-adenosyl-methyltransferase MraW [Neisseria flavescens SK114]
gi|241319340|gb|EER55805.1| S-adenosyl-methyltransferase MraW [Neisseria flavescens SK114]
Length = 320
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 179/248 (72%), Gaps = 5/248 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +GIY+D TFG+GGHS IL RL ++GRL+ DKD E++++ N+
Sbjct: 12 VLLHEAVDALAI---RKDGIYVDGTFGRGGHSRLILSRLSEQGRLVVFDKDPEAIAVANE 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++HN F L + I KIDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LAKQDKRVSVVHNGFETFQTALDELGIDKIDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R +PI T++L +
Sbjct: 129 MRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQREESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVAGRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI 472
DRIVK FI
Sbjct: 249 DRIVKQFI 256
>gi|244539213|dbj|BAH83256.1| S-adenosyl-methyltransferase [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 326
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 195/279 (69%), Gaps = 10/279 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+FL+EAIN LNI + +GIYIDATFG+GGHSC IL +L KKG+LI+ID+D E+V+ ++
Sbjct: 23 VFLHEAINGLNIVS---DGIYIDATFGRGGHSCLILSKLNKKGKLISIDRDPEAVATASR 79
Query: 287 ITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRFSII+ F+ L+ +++ + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 80 IEDSRFSIIYGLFSNLEKYVIEHKLMGKIDGILLDLGVSSPQLDIAERGFSFMKDGPLDM 139
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD G SA++WL +A E +I V++ YGEERFAK+IA IV Y+ PIT TK L +I
Sbjct: 140 RMDPLHGYSAAEWLKDAKETDIAYVLKIYGEERFAKRIAHGIVEYKKRQPITSTKVLADI 199
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I K+I K++K+ TR+FQAIRI+IN EL + L K L KGR+VVISFHSLED
Sbjct: 200 IRKAIPFRKQFKHSVTRSFQAIRIFINNELGEIEKVLHGSLKVLKPKGRLVVISFHSLED 259
Query: 466 RIVKNFI-NFNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
RI+K FI N++ DR P + E K+K + + K
Sbjct: 260 RIIKYFIKNYSN-----DRIFPPKLPITEDKIKEINQKK 293
>gi|270263951|ref|ZP_06192219.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Serratia
odorifera 4Rx13]
gi|333925572|ref|YP_004499151.1| ribosomal RNA small subunit methyltransferase H [Serratia sp. AS12]
gi|333930525|ref|YP_004504103.1| ribosomal RNA small subunit methyltransferase H [Serratia
plymuthica AS9]
gi|386327396|ref|YP_006023566.1| Ribosomal RNA small subunit methyltransferase H [Serratia sp. AS13]
gi|421781634|ref|ZP_16218099.1| S-adenosyl-methyltransferase MraW [Serratia plymuthica A30]
gi|270042144|gb|EFA15240.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Serratia
odorifera 4Rx13]
gi|333472132|gb|AEF43842.1| Ribosomal RNA small subunit methyltransferase H [Serratia
plymuthica AS9]
gi|333489632|gb|AEF48794.1| Ribosomal RNA small subunit methyltransferase H [Serratia sp. AS12]
gi|333959729|gb|AEG26502.1| Ribosomal RNA small subunit methyltransferase H [Serratia sp. AS13]
gi|407756200|gb|EKF66318.1| S-adenosyl-methyltransferase MraW [Serratia plymuthica A30]
Length = 313
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R NGIYID TFG+GGHS IL +LG +GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQAIAAAKS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F++L +++ + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDPRFTIVHGPFSDLSHYVRERELVGQIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + G SAS+WL A +I V++ +GEERFAK+IA+ IV + P+TRTK+L ++
Sbjct: 127 RMDPSSGQSASEWLLKAEADDIAWVLKTFGEERFAKRIARAIVERNRVEPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ +ISFHSLED
Sbjct: 187 IANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ +++ + LP+
Sbjct: 247 RIVKRFMRHHSRGAQVPAGLPL 268
>gi|422009558|ref|ZP_16356541.1| S-adenosyl-dependent methyltransferase [Providencia rettgeri Dmel1]
gi|414093376|gb|EKT55048.1| S-adenosyl-dependent methyltransferase [Providencia rettgeri Dmel1]
Length = 317
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/288 (47%), Positives = 190/288 (65%), Gaps = 11/288 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIYID TFG+GGHS IL +LG +GRLIAID+D E++
Sbjct: 11 VLLDEAVNGLNI---KPNGIYIDGTFGRGGHSRLILSQLGAQGRLIAIDRDPEAIKAAQA 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+ + +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFMIKHGPFSAIAEYVEEEGLTGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQL 402
RMD T+G SA +WL +A +I V++ +GEERFAK+IA+ IV H P+TRT+ L
Sbjct: 128 RMDPTKGQSAQQWLMDAEADDIAWVLKTFGEERFAKRIARAIVERNHNPEEEPLTRTRHL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I K R+K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHS
Sbjct: 188 AELIAKVSPMKDRHKHPATRSFQAIRIYINSELEEIEKALEGAMNVLAPQGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARCKPKK 506
LEDR+VK FI N+K P + +P+ L +++ L + KP +
Sbjct: 248 LEDRLVKRFIRKNSKGPSVPAGIPLTEAQIKELGAAQLRDLGKMKPSE 295
>gi|85712541|ref|ZP_01043589.1| S-adenosyl-methyltransferase [Idiomarina baltica OS145]
gi|85693675|gb|EAQ31625.1| S-adenosyl-methyltransferase [Idiomarina baltica OS145]
Length = 315
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 186/263 (70%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I L + +GIYIDATFG+GGH+ +L +L KGR+IA+D+D ++++
Sbjct: 11 VLLEESIRALVTDP---DGIYIDATFGRGGHTRALLSKLSPKGRVIALDQDPQAIASAQA 67
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFSIIH F++L I+++ + ++ GILFDLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 68 LADDERFSIIHTPFSDLAHIIEQQQLAHQVTGILFDLGVSSPQLDDAERGFSFMRDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG +A+ WL+ A E +I V++ YGEERFA+KIA+ IVH R P TRT+QL E
Sbjct: 128 MRMDSSRGETAADWLSYAEEDDITYVLKTYGEERFARKIARAIVHDREQKPFTRTRQLAE 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +++K+PATR+FQAIRI++N+EL+ + AL+ L GR+VVISFHSLE
Sbjct: 188 LIGRLVPSKEKHKHPATRSFQAIRIHVNRELEQIEDALEASLTALKEDGRLVVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK F+ +++ + LPI
Sbjct: 248 DRIVKRFMRTHSQPKQVPPGLPI 270
>gi|313200234|ref|YP_004038892.1| s-adenosyl-methyltransferase mraw [Methylovorus sp. MP688]
gi|312439550|gb|ADQ83656.1| S-adenosyl-methyltransferase MraW [Methylovorus sp. MP688]
Length = 321
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 186/281 (66%), Gaps = 5/281 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I + NGIY+D TFG+GGHS KILE+LG GRL+ +D+D +VS
Sbjct: 19 VLLEEAVAALAI---KPNGIYVDGTFGRGGHSRKILEQLGADGRLLGLDRDLAAVSAAQS 75
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RFSI H+ F+EL +L+ +I+++DG+L DLGISS QI+ RGFSF DGPLDMR
Sbjct: 76 IQDPRFSIHHHHFSELGEVLRAQDIQQVDGVLLDLGISSPQIDEGERGFSFRFDGPLDMR 135
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS-ITPITRTKQLVEI 405
MD +RG +A+++LA A+E + VI++YGEERFAK++A+ IV R+ +T T QL ++
Sbjct: 136 MDQSRGQTAAEFLAEASEQQLTGVIKEYGEERFAKQVARAIVAARTGGNALTTTGQLAKV 195
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +I + ++PATRTFQA+RI++NQEL+ LS+ L L GR+ VISFHSLED
Sbjct: 196 VAGAIPKVEPGQDPATRTFQALRIFLNQELEELSLVLPQCLDALAPGGRLAVISFHSLED 255
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKK 506
RIVK F+ + P+ P+ + +A KP K
Sbjct: 256 RIVKRFVRSEQDRDDLPANFPVLAKDL-PQPRMMAVGKPIK 295
>gi|395236423|ref|ZP_10414618.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter sp. Ag1]
gi|394728850|gb|EJF28885.1| 16S rRNA m(4)C1402 methyltransferase [Enterobacter sp. Ag1]
Length = 313
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D ++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEQGRLLAIDRDPQAIAAATA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALADYARERELDGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I VI+ +GEERF K+IA+ IV P+TRTK+L +
Sbjct: 127 RMDPTRGQSAAQWLMTAEEADIAWVIKTFGEERFGKRIARAIVERNREEPMTRTKELAAV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ ++ ++K+PATRTFQAIRI+IN EL + AL + L+ GR+ +ISFHSLED
Sbjct: 187 VSAAMPVKDKFKHPATRTFQAIRIWINSELDEIEKALNGSLEALSPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIY----NYLFEPKMKFLARCKPKKK 507
RIVK F+ N++ P + LP+ N L ++K L + P ++
Sbjct: 247 RIVKRFMRENSRGPQVPAGLPMTEAQLNKLGGRQLKALGKLMPGEE 292
>gi|350570226|ref|ZP_08938594.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
wadsworthii 9715]
gi|349797275|gb|EGZ51042.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
wadsworthii 9715]
Length = 320
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 192/290 (66%), Gaps = 17/290 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R NGIY+D TFG+GGHS IL +LG+ GRL+ DKD +++++
Sbjct: 12 VLLNEAVDALAV---RENGIYVDGTFGRGGHSRLILSKLGEAGRLVVFDKDPQAIAVAQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++HN F L + I KIDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LAEQDKRVSVVHNGFATFQTALNELGINKIDGALFDLGISSPQIDDGARGFSFRYDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A E + +VI++YGEERF+++IA+ IV R +PI T +L +
Sbjct: 129 MRMDTTRGMSAAEWIAVAQEQELHEVIKNYGEERFSRQIARAIVLQREESPIDTTGKLAK 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++R +R ++PATRTFQA+RI+IN+EL+ + L +LN GR+ VI+FHSLE
Sbjct: 189 LVAQAVRTRERGQDPATRTFQAVRIFINRELEEVKAVLPQVVARLNEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI-NFNTKIPHIDRRLPIYNYLFE-----PKMKFLARC-KPKKK 507
DRIVK FI ++T P LP + + E P +K + + KP +
Sbjct: 249 DRIVKQFIKQYSTHAP-----LPKWAAIREADLPQPPLKAIGKAVKPSDE 293
>gi|292489365|ref|YP_003532252.1| S-adenosyl methionine adenyltransferase [Erwinia amylovora
CFBP1430]
gi|292898411|ref|YP_003537780.1| S-adenosyl-methyltransferase [Erwinia amylovora ATCC 49946]
gi|428786330|ref|ZP_19003810.1| S-adenosyl methionine adenyltransferase [Erwinia amylovora
ACW56400]
gi|291198259|emb|CBJ45365.1| S-adenosyl-methyltransferase [Erwinia amylovora ATCC 49946]
gi|291554799|emb|CBA22629.1| S-adenosyl methionine adenyltransferase [Erwinia amylovora
CFBP1430]
gi|312173530|emb|CBX81784.1| S-adenosyl methionine adenyltransferase [Erwinia amylovora ATCC
BAA-2158]
gi|426275176|gb|EKV52914.1| S-adenosyl methionine adenyltransferase [Erwinia amylovora
ACW56400]
Length = 312
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 182/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + +GIYID TFG+GGHS IL +LG+ GRL AID+D ++++
Sbjct: 10 VLLDEAVNALNI---KPDGIYIDGTFGRGGHSRLILSQLGEHGRLYAIDRDPQAIAAAAD 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF+IIH F+ L ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFTIIHGPFSALAEYAEQRGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFA++IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTRGQSAAEWLLKAEESDITFVLKTFGEERFARRIARAIVERNRQQPMTRTKELADV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 IYAATPVKDKFKHPATRSFQAIRIWVNSELEEIEQALKGALSALAAGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK F+ ++ P + LP+
Sbjct: 247 RIVKRFMREQSRGPQVPHGLPM 268
>gi|322834428|ref|YP_004214455.1| S-adenosyl-methyltransferase MraW [Rahnella sp. Y9602]
gi|384259650|ref|YP_005403584.1| 16S rRNA m(4)C1402 methyltransferase [Rahnella aquatilis HX2]
gi|321169629|gb|ADW75328.1| S-adenosyl-methyltransferase MraW [Rahnella sp. Y9602]
gi|380755626|gb|AFE60017.1| 16S rRNA m(4)C1402 methyltransferase [Rahnella aquatilis HX2]
Length = 313
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RQDGIYIDGTFGRGGHSRLILSQLGPDGRLLAIDRDPQAIKAAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L ++ ++ KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSDLADYVRDRGLEGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV P+TRTK+L ++
Sbjct: 127 RMDPTRGYSATEWLMKAEAEDIAWVLKTFGEERFAKRIARAIVERNRELPMTRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 187 IANASPVREKHKHPATRSFQAIRIYINSELEEIERALDGALEILAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI +++ + +P+
Sbjct: 247 RIVKRFIRQHSRGAQVPAGIPM 268
>gi|296313573|ref|ZP_06863514.1| S-adenosyl-methyltransferase MraW [Neisseria polysaccharea ATCC
43768]
gi|296839874|gb|EFH23812.1| S-adenosyl-methyltransferase MraW [Neisseria polysaccharea ATCC
43768]
Length = 319
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +GIY+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGIYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFVSFQTALDDLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKQGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|152981340|ref|YP_001354964.1| hypothetical protein mma_3274 [Janthinobacterium sp. Marseille]
gi|151281417|gb|ABR89827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 255
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 163/228 (71%), Gaps = 11/228 (4%)
Query: 497 KFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILV 556
K+LAR L+I ++ D+CPNGLQVEGR+ I +V+GVTAS+ L++ A++ ADAILV
Sbjct: 13 KYLART-----LDITRFRDFCPNGLQVEGRTEIKTLVSGVTASMALLEAALEKGADAILV 67
Query: 557 HHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTR 616
HHGYFW+GE+ ++G K +RL+ L+ + +NL+AYHLPLDMH + GNNAQLA L
Sbjct: 68 HHGYFWRGEDMRVIGQKHQRLKTLLTHDVNLFAYHLPLDMHAEFGNNAQLAARLGLQGES 127
Query: 617 RFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTG 676
RF+++++GW+G+ N + T+ +L I + + +KP++IGD +K+ IGWCTG
Sbjct: 128 RFAEDDLGWLGRSTN------PAVTTVGELAQEIEKSLQRKPLLIGDPAQKLGAIGWCTG 181
Query: 677 AAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AAQ L DAI G Y+SGEISE TV+++RESGVAY A GHHATERY
Sbjct: 182 AAQGFLGDAIAAGAQVYLSGEISEPTVHLARESGVAYLACGHHATERY 229
>gi|410614108|ref|ZP_11325159.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
psychrophila 170]
gi|410166379|dbj|GAC39048.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
psychrophila 170]
Length = 311
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 180/259 (69%), Gaps = 8/259 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I+ L I + +GIY+DATFG+GGHS +IL+ L G+LIAID+D ++
Sbjct: 10 VLLQESIDGLAI---KPDGIYMDATFGRGGHSRQILKALSANGQLIAIDRDLSAIEAAKS 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFSI H F+EL + ++ + KIDGIL DLG+SS Q+++ RGFSF+ +GPLD
Sbjct: 67 LADDPRFSIHHRPFSELQAVAEELGLLGKIDGILMDLGVSSPQLDDADRGFSFMRNGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMDITRGISA+ WLA A E +I +VI+++GEE+F K+IA IV+ R I PIT T QL E
Sbjct: 127 MRMDITRGISAADWLAVAEEQDITQVIKEFGEEKFGKRIAHGIVNARQIAPITDTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ +YK+PATR+FQAIRIY+N EL + LK L +GR+ VISFHSLE
Sbjct: 187 IIDLAVPVKDKYKHPATRSFQAIRIYVNSELDEIKTGLKAALSTLAPQGRLTVISFHSLE 246
Query: 465 DRIVKNFINFNTK---IPH 480
DR+VK F+ ++ +PH
Sbjct: 247 DRLVKRFVREQSRGLNVPH 265
>gi|409395395|ref|ZP_11246472.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. Chol1]
gi|409120024|gb|EKM96394.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. Chol1]
Length = 315
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS +LE+LG +GRL+ DKD +++ G
Sbjct: 12 VLLDEAVAALAV---RPDGRYLDGTFGRGGHSRLLLEQLGPQGRLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D ++++ + GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGDEVVQRGWTGTLSGILLDLGVSSPQLDDPARGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A A E +I +V +DYGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGVSAAEWIAQANEDDIARVFKDYGEERFAKRMARAVVQRRAEKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTDANPAWEKGKNPATRAFQGLRIYINNELGDLEAGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K + R LP+ FEP++K + + +
Sbjct: 249 EDRIVKQFMRRHAKGEADQLPRGLPVMPKPFEPRLKLIGKAQ 290
>gi|253998164|ref|YP_003050227.1| S-adenosyl-methyltransferase MraW [Methylovorus glucosetrophus
SIP3-4]
gi|253984843|gb|ACT49700.1| S-adenosyl-methyltransferase MraW [Methylovorus glucosetrophus
SIP3-4]
Length = 321
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 186/281 (66%), Gaps = 5/281 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I + NGIY+D TFG+GGHS KILE+LG GRL+ +D+D +VS
Sbjct: 19 VLLEEAVAALAI---KPNGIYVDGTFGRGGHSRKILEQLGADGRLLGLDRDLAAVSAARS 75
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RFSI H+ F+EL +L+ +I+++DG+L DLGISS QI+ RGFSF DGPLDMR
Sbjct: 76 IQDPRFSIHHHHFSELGEVLRAQDIQQVDGVLLDLGISSPQIDEGERGFSFRFDGPLDMR 135
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS-ITPITRTKQLVEI 405
MD +RG +A+++LA A+E + VI++YGEERFAK++A+ IV R+ +T T QL ++
Sbjct: 136 MDQSRGQTAAEFLAEASEQQLTGVIKEYGEERFAKQVARAIVAARTGGDALTTTGQLAKV 195
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +I + ++PATRTFQA+RI++NQEL+ LS+ L L GR+ VISFHSLED
Sbjct: 196 VAGAIPKVEPGQDPATRTFQALRIFLNQELEELSLVLPQCLDALAPGGRLAVISFHSLED 255
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKK 506
RIVK F+ + P+ P+ + +A KP K
Sbjct: 256 RIVKRFVRSEQDRDDLPANFPVLAKDL-PQPRMMAVGKPIK 295
>gi|385850658|ref|YP_005897173.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M04-240196]
gi|325205481|gb|ADZ00934.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M04-240196]
Length = 328
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|417515253|ref|ZP_12178842.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353655800|gb|EHC96717.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 313
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 187/286 (65%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG+ RLI E++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEDSRLILSQLGEEAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++K+PATRTFQA+RI++N EL+ + ALK L GR+ +ISFHSLED
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RIVK F+ ++ P + LP+ + +++ L + P +K
Sbjct: 247 RIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEK 292
>gi|400406379|ref|YP_006589127.1| S-adenosyl-methyltransferase MraW [secondary endosymbiont of
Heteropsylla cubana]
gi|400364632|gb|AFP85699.1| S-adenosyl-methyltransferase MraW [secondary endosymbiont of
Heteropsylla cubana]
Length = 315
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 185/262 (70%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI L+I R NGIY+D TFG+GGHS IL +LG +G+L AID+D ++
Sbjct: 10 VLLNEAIQSLHI---RENGIYLDGTFGRGGHSRLILSKLGSQGQLFAIDRDLSAIKSAET 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITDSRF IIH F+ + + +++ I KIDGIL DLG+SS Q++N RGFSF+ +GPLDM
Sbjct: 67 ITDSRFKIIHGSFSNIKQYMDQFSLIGKIDGILLDLGVSSPQLDNPERGFSFMRNGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL ATE I +V++ +GEERFAK+IA+ IV Y+ IT T +L +
Sbjct: 127 RMDNTRGQSAAQWLEQATEEEIMRVLKIFGEERFAKRIAQTIVDYKQQKSITHTSELASL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
IL ++ +++++PAT++FQAIRIYIN EL+ + AL L+ GR+ +ISFHSLED
Sbjct: 187 ILGAVPFRRKHRHPATKSFQAIRIYINNELEEVKRALDSTLTVLSSGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R++K FI++ ++ P + + P+
Sbjct: 247 RLIKKFIHYYSRKPQLPKGFPL 268
>gi|387129843|ref|YP_006292733.1| rRNA small subunit methyltransferase H [Methylophaga sp. JAM7]
gi|386271132|gb|AFJ02046.1| rRNA small subunit methyltransferase H [Methylophaga sp. JAM7]
Length = 312
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 185/279 (66%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L I+ +G+Y+DATFG+GGHS KIL++L GRL+ +D+D +++S+G
Sbjct: 11 VLLNEAVTALAIQP---DGLYVDATFGRGGHSRKILDQLDASGRLLGLDRDPQAISVGQV 67
Query: 287 IT--DSRFSIIHNCFTELD-IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RFSI H F+EL+ ++ + ++++GIL D+G+SS Q++ RGFSFL DGPL
Sbjct: 68 LAAEDPRFSIAHCAFSELEQVVFGRLWQQRVNGILLDIGVSSPQLDQPERGFSFLHDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD ++GISA++WLA A E I VI++ GEERF K+IA+ I R P+T T+QL
Sbjct: 128 DMRMDTSQGISAAQWLAEAEESEIASVIKELGEERFGKRIARAICEQRLEQPLTTTRQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ K+ ++K+PATRTFQAIRI+IN EL L+ L L + GR+VVISFHSL
Sbjct: 188 ELVDKASPVKDKFKHPATRTFQAIRIFINDELGELTQVLAQALDVLAVGGRLVVISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK + K + P+ P++K + +
Sbjct: 248 EDRIVKRYFRDQAKGDDLPAHFPVRAAELNPRLKIIGKA 286
>gi|374313893|ref|YP_005060322.1| S-adenosyl-methyltransferase MraW [Serratia symbiotica str. 'Cinara
cedri']
gi|363988119|gb|AEW44310.1| S-adenosyl-methyltransferase MraW [Serratia symbiotica str. 'Cinara
cedri']
Length = 313
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/283 (48%), Positives = 194/283 (68%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+FL +A++ LNI + NGIYID+TFG+GGHS IL +LG KG+L+AID+D++++
Sbjct: 10 VFLEQAVHGLNICS---NGIYIDSTFGRGGHSRLILSQLGIKGQLLAIDRDSQAIKAAKC 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRFSIIH F++L D ++ I KI+GILFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDSRFSIIHGSFSKLLDYAQERNLIGKINGILFDLGVSSPQLDDAKRGFSFIHDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + G+SA++WL A +I V++ +GEER AK+IA+ IV + PITRT+QL +
Sbjct: 127 RMDQSTGLSAAEWLMKAGVEDIAWVLKTFGEERLAKRIAQAIVKSNCVKPITRTRQLATL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I KR K+PATR+FQAIRIYIN EL+ + AL L +GR+ +ISFHSLED
Sbjct: 187 IADVSLIRKRRKHPATRSFQAIRIYINNELEEIKQALNSSLDILAPQGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
RIVK+FI ++++ P + +P+ + K+K L + P
Sbjct: 247 RIVKHFIRYHSRGPQVPAGIPLTEWQLRSMDVRKLKALGKIMP 289
>gi|392555962|ref|ZP_10303099.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas undina
NCIMB 2128]
Length = 312
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 185/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGDAGRLQAIDQDPQAIKSAEK 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D SRFSI H+ F++L + ++ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDSRFSIAHSRFSKLYEVAEQNDLIGKVDGILLDIGVSSPQLDDAARGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G SA++WLA A +I VI+ GEE+F K+IA +I+ R TPIT TKQL +
Sbjct: 127 MRMDPSTGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKILEVREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQAAIKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K I R LP+ +
Sbjct: 247 DRIVKQFIKKQSKGEAIPRGLPLTD 271
>gi|421564664|ref|ZP_16010461.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3081]
gi|402345787|gb|EJU80893.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3081]
Length = 328
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|421560573|ref|ZP_16006430.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM2657]
gi|402339920|gb|EJU75126.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM2657]
Length = 328
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|418287649|ref|ZP_12900222.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM233]
gi|418289885|ref|ZP_12902106.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM220]
gi|421538558|ref|ZP_15984733.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 93003]
gi|372202596|gb|EHP16386.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM220]
gi|372203544|gb|EHP17197.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM233]
gi|402316228|gb|EJU51777.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 93003]
Length = 328
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|410633917|ref|ZP_11344557.1| ribosomal RNA small subunit methyltransferase H [Glaciecola arctica
BSs20135]
gi|410146577|dbj|GAC21424.1| ribosomal RNA small subunit methyltransferase H [Glaciecola arctica
BSs20135]
Length = 311
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 131/259 (50%), Positives = 179/259 (69%), Gaps = 8/259 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I+ L I + +GIY+DATFG+GGHS +IL+ L KG+LIA D+D ++
Sbjct: 10 VLLQESIDGLAI---KPDGIYMDATFGRGGHSRQILKALSPKGQLIAFDRDLSAIEAAKS 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFSI H F+EL + ++ I KIDGIL DLG+SS Q+++ RGFSF+ +GPLD
Sbjct: 67 LADDPRFSIHHRPFSELQAVAEELGLIGKIDGILMDLGVSSPQLDDAERGFSFMRNGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA+ WLA A E +I +VI+++GEE+F K+IA IV+ R I PIT T QL E
Sbjct: 127 MRMDTTRGVSAADWLAVAEEQDITQVIKEFGEEKFGKRIAHGIVNARQIAPITDTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ +YK+PATR+FQAIRIY+N EL + LK L +GR+ VISFHSLE
Sbjct: 187 IIDLAVPVKDKYKHPATRSFQAIRIYVNSELDEIKTGLKAALNTLAPQGRLAVISFHSLE 246
Query: 465 DRIVKNFINFNTK---IPH 480
DR+VK F+ ++ +PH
Sbjct: 247 DRLVKRFVREQSRGLNVPH 265
>gi|268591763|ref|ZP_06125984.1| S-adenosyl-methyltransferase MraW [Providencia rettgeri DSM 1131]
gi|291312724|gb|EFE53177.1| S-adenosyl-methyltransferase MraW [Providencia rettgeri DSM 1131]
Length = 317
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 191/288 (66%), Gaps = 11/288 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIYID TFG+GGHS IL +LG+ GRLIAID+D E++
Sbjct: 11 VLLDEAVNGLNI---KPNGIYIDGTFGRGGHSRLILSQLGENGRLIAIDRDPEAIKAAQT 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+ + + + ++ + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFMIKHGPFSAIAEYVEEEGLVGQIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQL 402
RMD T+G SA +WL +A +I V++ +GEERFAK+IA+ IV H P+TRT+ L
Sbjct: 128 RMDPTKGQSAQQWLMDAEADDIAWVLKTFGEERFAKRIARAIVERNHNPEEEPLTRTRHL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I K R+K+PATR+FQAIRIYIN EL+ + AL+ L +GR+ VISFHS
Sbjct: 188 AELIAKVSPMKDRHKHPATRSFQAIRIYINSELEEIEKALEGAMNVLAPQGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARCKPKK 506
LEDR+VK FI N+K P + +P+ L +++ L + KP +
Sbjct: 248 LEDRLVKRFIRKNSKGPSVPAGIPLTEAQIKELGAAQLRDLGKMKPSE 295
>gi|433536039|ref|ZP_20492555.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 77221]
gi|432275843|gb|ELL30909.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 77221]
Length = 328
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS Q+++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQVDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|421907412|ref|ZP_16337289.1| S-adenosyl-methyltransferase [Neisseria meningitidis alpha704]
gi|393291487|emb|CCI73281.1| S-adenosyl-methyltransferase [Neisseria meningitidis alpha704]
Length = 328
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 290
>gi|218768820|ref|YP_002343332.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis Z2491]
gi|385327761|ref|YP_005882064.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis alpha710]
gi|385857884|ref|YP_005904396.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NZ-05/33]
gi|416168381|ref|ZP_11607936.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
OX99.30304]
gi|416186504|ref|ZP_11613784.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M0579]
gi|421547932|ref|ZP_15993963.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM2781]
gi|421558368|ref|ZP_16004250.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 92045]
gi|433468612|ref|ZP_20426047.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 98080]
gi|433512773|ref|ZP_20469573.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 63049]
gi|433519292|ref|ZP_20476015.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 65014]
gi|20139195|sp|Q9JSY9.1|RSMH_NEIMA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|121052828|emb|CAM09176.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
gi|308388613|gb|ADO30933.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis alpha710]
gi|325130837|gb|EGC53570.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
OX99.30304]
gi|325136978|gb|EGC59575.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M0579]
gi|325208773|gb|ADZ04225.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NZ-05/33]
gi|402327274|gb|EJU62665.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM2781]
gi|402338188|gb|EJU73425.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 92045]
gi|432205831|gb|ELK61847.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 98080]
gi|432249599|gb|ELL05002.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 63049]
gi|432256220|gb|ELL11544.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 65014]
Length = 328
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 290
>gi|333376058|ref|ZP_08467852.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Kingella
kingae ATCC 23330]
gi|332969039|gb|EGK08079.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Kingella
kingae ATCC 23330]
Length = 321
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/248 (50%), Positives = 174/248 (70%), Gaps = 5/248 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LNI+ NG+Y+D TFG+GGHS IL +LG++GRLI DKD +++ + K
Sbjct: 11 VLLHEAVAALNIQP---NGVYVDGTFGRGGHSRLILSQLGEQGRLIVFDKDPQAIEVAQK 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+R S++HN F + + KIDG LFDLGISS Q+++ RGFSF D PLD
Sbjct: 68 LAQQDARVSVVHNGFATFEAACTNLGLDKIDGALFDLGISSPQVDDGSRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG SA++WLA A+E I +VI++YGEERF+++IA+ IV RS +PI T+QL
Sbjct: 128 MRMDTTRGQSAAEWLAVASEQEIHEVIKNYGEERFSRQIARTIVAQRSESPINTTRQLAA 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I + +R +R ++ ATRTFQAIRI+IN+EL + L +LN+ GR+ VI+FHSLE
Sbjct: 188 ITAQCVRSRERGQDRATRTFQAIRIFINRELDEVEQVLPQVVNRLNVGGRLAVIAFHSLE 247
Query: 465 DRIVKNFI 472
DRIVK F+
Sbjct: 248 DRIVKQFM 255
>gi|421556467|ref|ZP_16002382.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 80179]
gi|402337140|gb|EJU72390.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 80179]
Length = 328
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 290
>gi|422023495|ref|ZP_16370000.1| S-adenosyl-dependent methyltransferase [Providencia sneebia DSM
19967]
gi|414094263|gb|EKT55933.1| S-adenosyl-dependent methyltransferase [Providencia sneebia DSM
19967]
Length = 316
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 194/292 (66%), Gaps = 11/292 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI + NGIYID TFG+GGHS IL +L + GRLIAID+D E++ + +
Sbjct: 11 VLLDEAVNGLNI---KPNGIYIDGTFGRGGHSRLILSQLNEDGRLIAIDRDPEAIKVAKE 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF I H F+ + + + ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFMIKHGPFSAIAEYVEEEGLVGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD TRG SA +WL A +I V++ +GEERFAK+IA+ IV P+TRT+QL
Sbjct: 128 RMDPTRGQSAQEWLMKAEADDIAWVLKTFGEERFAKRIARAIVERNNNPEQEPLTRTRQL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I + +R+K+PATR+FQAIRIYIN EL+ + AL L +GR+ VISFHS
Sbjct: 188 AELIAQVSPLKERHKHPATRSFQAIRIYINSELEEIEKALNGAVTVLAPEGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYE 514
LEDR+VK FI N+K P + +P L E +++ L K ++ +K E
Sbjct: 248 LEDRLVKRFIRQNSKGPSVPAGIP----LTEAQIRELGAAKLREAGKMKPSE 295
>gi|119469206|ref|ZP_01612190.1| S-adenosyl-methyltransferase MraW [Alteromonadales bacterium TW-7]
gi|119447458|gb|EAW28726.1| S-adenosyl-methyltransferase MraW [Alteromonadales bacterium TW-7]
Length = 312
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 183/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGDAGRLQAIDQDPQAIKSAEK 66
Query: 287 ITD-SRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D SRF+I H F++L D+ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDSRFAIAHTRFSKLYDVAEQNDLIGKVDGILLDIGVSSPQLDDAERGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ GEE+F K+IA +I+ R TPIT TKQL +
Sbjct: 127 MRMDPTSGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKILETREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQSAVKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K + R LP+ +
Sbjct: 247 DRIVKQFIRKQSKGEALPRGLPLTD 271
>gi|442609555|ref|ZP_21024292.1| rRNA small subunit methyltransferase H [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749027|emb|CCQ10354.1| rRNA small subunit methyltransferase H [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 311
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/265 (49%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ + E I+ L I + +GIY+D TFG+GGHS +IL RLG+ GRL AID+D +++ K
Sbjct: 10 VLMEETIDALAI---KPDGIYLDGTFGRGGHSGQILARLGENGRLQAIDQDPQAIQAAEK 66
Query: 287 -ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+D+RF+I H F+ L + I ++DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 YASDTRFAIAHTRFSNLRQVANDAGILGQVDGILLDIGVSSPQLDDAARGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ YGEE+F ++IA +I+ R TPIT TKQL E
Sbjct: 127 MRMDPTSGRSAAQWLAEADLEDITYVIKQYGEEKFGRRIATKIIETREHTPITTTKQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL L GR+VVISFHSLE
Sbjct: 187 LVDQAVPVKDKHKHPATRTFQAIRIYINSELEEIQTALTEALSVLKSGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K I R LP+ +
Sbjct: 247 DRIVKQFIKKQSKGEAIPRGLPLTD 271
>gi|392536651|ref|ZP_10283788.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas marina
mano4]
Length = 312
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 183/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGDAGRLQAIDQDPQAIKSAEK 66
Query: 287 ITD-SRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D SRF+I H F++L D+ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDSRFAIAHTRFSKLYDVAEQNDLIGKVDGILLDIGVSSPQLDDAERGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ GEE+F K+IA +I+ R TPIT TKQL +
Sbjct: 127 MRMDPTSGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKILETREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQSAVKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K + R LP+ +
Sbjct: 247 DRIVKQFIRKQSKGEALPRGLPLTD 271
>gi|393778117|ref|ZP_10366399.1| MraW protein [Ralstonia sp. PBA]
gi|392714852|gb|EIZ02444.1| MraW protein [Ralstonia sp. PBA]
Length = 321
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 185/291 (63%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G Y+D TFG+GGHS IL +LG GRL+A DKD +++
Sbjct: 15 VLLDEAVDALVW---RRDGRYVDGTFGRGGHSRLILSQLGPAGRLVAFDKDPAAIAEAGT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D+RF+I H F ++ + + G+L DLGISS QI+ RGFSF DGPLDMR
Sbjct: 72 VQDARFAIEHTSFADMGERMAARGEVPVAGVLLDLGISSPQIDEAARGFSFRFDGPLDMR 131
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR----SITPITRTKQL 402
MD TRG +A++WLA A E I +V++DYGEERFA +IAK IV R P+ T L
Sbjct: 132 MDTTRGETAAEWLATADEREIARVVRDYGEERFAVQIAKAIVARRREPAPSGPVATTADL 191
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++ ++++ ++ ++PATRTFQAIRI+INQEL +L L ++ L GR+VVISFHS
Sbjct: 192 AALVAQAVKTREKGQDPATRTFQAIRIHINQELADLERGLTAAYELLEQGGRLVVISFHS 251
Query: 463 LEDRIVKNFINFNTKIPHID-----RRLPI-YNYLFEPKMKFLARCKPKKK 507
LEDRIVK F+ + + D RR+P+ + L +P ++ L R KP ++
Sbjct: 252 LEDRIVKRFMQAHARPQLADSSADLRRMPLRASELPQPTLRLLGRVKPGQQ 302
>gi|385342571|ref|YP_005896442.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M01-240149]
gi|421562616|ref|ZP_16008442.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM2795]
gi|325202777|gb|ADY98231.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M01-240149]
gi|402342760|gb|EJU77918.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM2795]
Length = 316
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 188/281 (66%), Gaps = 7/281 (2%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ ++
Sbjct: 1 MLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEEL 57
Query: 288 --TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLDM
Sbjct: 58 ARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +I
Sbjct: 118 RMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQI 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLED
Sbjct: 178 VAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLED 237
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
RIVK F+ ++ + R + L EP +K R KP
Sbjct: 238 RIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 278
>gi|359448054|ref|ZP_09237607.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20480]
gi|358046101|dbj|GAA73856.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20480]
Length = 312
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 182/265 (68%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGDAGRLQAIDQDPQAIKSAEK 66
Query: 287 ITD-SRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D SRF+I H F+ L D+ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDSRFAIAHTRFSRLYDVAEQNDLIGKVDGILLDIGVSSPQLDDAERGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ GEE+F K+IA +I+ R TPIT TKQL +
Sbjct: 127 MRMDPTSGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKILETREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQSAVKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K + R LP+ +
Sbjct: 247 DRIVKQFIRKQSKGEALPRGLPLTD 271
>gi|385338646|ref|YP_005892519.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis WUE 2594]
gi|433464384|ref|ZP_20421876.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM422]
gi|433474891|ref|ZP_20432236.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 88050]
gi|433489764|ref|ZP_20446901.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM418]
gi|433514926|ref|ZP_20471701.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2004090]
gi|433516999|ref|ZP_20473750.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 96023]
gi|433523319|ref|ZP_20479988.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 97020]
gi|433528861|ref|ZP_20485468.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3652]
gi|433529670|ref|ZP_20486266.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3642]
gi|433531782|ref|ZP_20488350.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2007056]
gi|433533940|ref|ZP_20490488.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2001212]
gi|254673389|emb|CBA08689.1| S-adenosyl-methyltransferase [Neisseria meningitidis alpha275]
gi|319411060|emb|CBY91460.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis WUE 2594]
gi|432205618|gb|ELK61643.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM422]
gi|432212048|gb|ELK67991.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 88050]
gi|432229758|gb|ELK85439.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM418]
gi|432255073|gb|ELL10404.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 96023]
gi|432255986|gb|ELL11312.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2004090]
gi|432261665|gb|ELL16911.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 97020]
gi|432263965|gb|ELL19175.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3652]
gi|432268965|gb|ELL24129.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3642]
gi|432269261|gb|ELL24423.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2007056]
gi|432273184|gb|ELL28283.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2001212]
Length = 328
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLDEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|385854577|ref|YP_005901090.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M01-240355]
gi|325203518|gb|ADY98971.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M01-240355]
Length = 316
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 188/281 (66%), Gaps = 7/281 (2%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ ++
Sbjct: 1 MLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEEL 57
Query: 288 --TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLDM
Sbjct: 58 ARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +I
Sbjct: 118 RMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQI 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLED
Sbjct: 178 VAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLED 237
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
RIVK F+ ++ + R + L EP +K R KP
Sbjct: 238 RIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 278
>gi|383191628|ref|YP_005201756.1| S-adenosyl-methyltransferase MraW [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371589886|gb|AEX53616.1| S-adenosyl-methyltransferase MraW [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 313
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 183/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG GRL+AID+D +++
Sbjct: 10 VLLDEAVNGLNI---RQDGIYIDGTFGRGGHSRLILSQLGPDGRLLAIDRDPQAIKAAES 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L ++ ++ KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IVDPRFSIVHGPFSDLADYVRDRGLEGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A +I V++ +GEERFAK+IA+ IV P++RTK+L ++
Sbjct: 127 RMDPTRGYSAAEWLMKAEAEDIAWVLKTFGEERFAKRIARAIVERNRELPMSRTKELADL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL+ + AL + L +GR+ VISFHSLED
Sbjct: 187 IANASPIREKHKHPATRSFQAIRIYINSELEEIERALDGALEILAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI +++ + +P+
Sbjct: 247 RIVKRFIRQHSRGAQVPAGIPM 268
>gi|433479136|ref|ZP_20436434.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 63041]
gi|433540341|ref|ZP_20496797.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 63006]
gi|432218490|gb|ELK74348.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 63041]
gi|432277990|gb|ELL33035.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 63006]
Length = 328
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLDEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 290
>gi|292490616|ref|YP_003526055.1| S-adenosyl-methyltransferase MraW [Nitrosococcus halophilus Nc4]
gi|291579211|gb|ADE13668.1| S-adenosyl-methyltransferase MraW [Nitrosococcus halophilus Nc4]
Length = 317
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 186/278 (66%), Gaps = 6/278 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E I L I R +G+Y+DATFG+GGH+ IL+ L +GRL+ +DKD E+++ G
Sbjct: 15 VLLREVIQALAI---RRDGLYVDATFGRGGHAQAILDALSSEGRLLGVDKDPEAIAAGRI 71
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RFSI+ EL ++ + +K+++G+LFDLG+SS Q+ N RGFSFL DGPL
Sbjct: 72 LAQQDRRFSIVQASIGELARVVAEQGWLKRVNGVLFDLGVSSPQLENAKRGFSFLQDGPL 131
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G SA++WLA+ATE I V++ YGEERF ++IA+ IV R I P+TRTKQL
Sbjct: 132 DMRMNPAVGQSAAEWLASATEKEIAAVLKTYGEERFCRRIARAIVQAREINPLTRTKQLA 191
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ K+ + ++PATR+FQAIRI+IN EL+ L AL+ L +KGR+VVISFHSL
Sbjct: 192 EVVAKANPSWEPGRHPATRSFQAIRIFINNELEELRAALEQAVTVLAVKGRLVVISFHSL 251
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR 501
EDR+VK F ++ + LP+ F+ ++ L +
Sbjct: 252 EDRMVKRFFRQKSRGEDLPPDLPVMQDHFQASLQVLGK 289
>gi|348618059|ref|ZP_08884591.1| S-adenosyl-dependent methyl transferase MraW [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816571|emb|CCD29256.1| S-adenosyl-dependent methyl transferase MraW [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 323
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 172/258 (66%), Gaps = 7/258 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L R +G YID TFG+GGHS IL RL GRL+A DKD E+ +
Sbjct: 18 VLLNEAVDALVW---RTDGFYIDGTFGRGGHSRAILARLAPGGRLLAFDKDPEACAAAQL 74
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD+RF I+H L L + N ++ G+L DLG+SS Q++N RGFSF DGPLDMR
Sbjct: 75 ITDARFEIVHGDCAALREQLNQRNAPRVSGVLLDLGLSSPQLDNPARGFSFSADGPLDMR 134
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT----PITRTKQL 402
MD +G SA++WLA A++ + +VI+ YGEERFA +IAK I R + P+ RT++L
Sbjct: 135 MDPRQGESAAQWLARASQQEMTEVIRRYGEERFAGQIAKAITARRMQSDRYGPLARTREL 194
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E++ ++++ ++PATRTFQAIRIY+NQEL+ LS AL + L GR+VV+SFHS
Sbjct: 195 AELVARAVKTRPLGRHPATRTFQAIRIYLNQELQTLSAALDAALEILEPGGRLVVMSFHS 254
Query: 463 LEDRIVKNFINFNTKIPH 480
LEDRIVK F+ + + P
Sbjct: 255 LEDRIVKRFMQTHARAPQ 272
>gi|134096210|ref|YP_001101285.1| hypothetical protein HEAR3055 [Herminiimonas arsenicoxydans]
gi|133740113|emb|CAL63164.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 260
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 159/217 (73%), Gaps = 6/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L+I ++ D+CPNGLQVEGR I +VTGVTASL L++ A+ ADAILVHHGYFW+GE++
Sbjct: 24 LDITRFRDFCPNGLQVEGRREIKKLVTGVTASLALLEAAIAKGADAILVHHGYFWRGEDA 83
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
++G K RL+ L+ + +NL+AYHLPLDMH + GNNAQLA+ L RF ++++GW+G
Sbjct: 84 RVIGQKHGRLKLLLAHDVNLFAYHLPLDMHAEFGNNAQLAQRLGLLAEARFGEDDLGWLG 143
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + I T+ DL I R++G+ P++IGD +K+ + GWCTGAAQ+LL DAI
Sbjct: 144 TVAD------ASIATVGDLALLIERQLGRVPLLIGDPAQKLGKAGWCTGAAQSLLGDAIA 197
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGEISE TV+++RESGVAY A GHHATERY
Sbjct: 198 AGANVYLSGEISEPTVHLARESGVAYLACGHHATERY 234
>gi|325265585|ref|ZP_08132276.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Kingella
denitrificans ATCC 33394]
gi|324982933|gb|EGC18554.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Kingella
denitrificans ATCC 33394]
Length = 323
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 175/256 (68%), Gaps = 6/256 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ LN+ R +GIY+D TFG+GGHS IL RL ++GRLI DKD ++++ +
Sbjct: 11 VLLNEAVDALNV---RPSGIYVDGTFGRGGHSRLILSRLNEQGRLIVFDKDPAAIAVAQE 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S+ H F+ D + I +IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LARQDQRVSVFHQGFSHFDAACTELGISQIDGALFDLGISSPQIDDASRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG SA++WL +A E I +VI++YGEERF+++IA+ IV R PI T QL E
Sbjct: 128 MRMDTTRGESAAEWLMHADEQEIHEVIKNYGEERFSRQIARAIVAKRIEAPIHTTGQLAE 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I + +R ++ ++PATRTFQAIRIYIN+EL ++ L +LN GR+ VI+FHSLE
Sbjct: 188 IAAQCVRSREKGQHPATRTFQAIRIYINRELDEVAQVLPQVTTRLNTHGRLAVIAFHSLE 247
Query: 465 DRIVKNFI-NFNTKIP 479
DRIVK F+ ++T P
Sbjct: 248 DRIVKQFMREYSTHAP 263
>gi|315125595|ref|YP_004067598.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas sp. SM9913]
gi|359437069|ref|ZP_09227143.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20311]
gi|359445149|ref|ZP_09234899.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20439]
gi|315014108|gb|ADT67446.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas sp. SM9913]
gi|358028248|dbj|GAA63392.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20311]
gi|358040966|dbj|GAA71148.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20439]
Length = 312
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/265 (49%), Positives = 185/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG+ GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGESGRLQAIDQDPQAIKSAEK 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSI H+ F++L + ++ + I ++DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDPRFSIAHSRFSKLYEVAEQNDLIGQVDGILLDIGVSSPQLDDAARGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G SA++WLA A +I VI+ GEE+F K+IA +I+ R TPIT TKQL +
Sbjct: 127 MRMDPSTGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKILEVREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQAAIKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K I R LP+ +
Sbjct: 247 DRIVKQFIKKQSKGEAIPRGLPLTD 271
>gi|167854991|ref|ZP_02477765.1| S-adenosyl-methyltransferase MraW [Haemophilus parasuis 29755]
gi|167853839|gb|EDS25079.1| S-adenosyl-methyltransferase MraW [Haemophilus parasuis 29755]
Length = 312
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 186/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIY+D TFG+GGHS IL +LG++GRLIAID+D +++ N
Sbjct: 10 VLLHEAVDGLAI---KPNGIYVDGTFGRGGHSRLILSKLGEQGRLIAIDRDPRAIAEANT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF I+H+ F+ + I + N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFQIVHSAFSSIPDICDELNLVGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA +WLA + ++ V++++GEERFAK+IA+ +V Y +S T I+RT QLV
Sbjct: 127 RMDTTKGLSAMEWLAQVSVDDLAWVLKEFGEERFAKRIAQAVVSYNKSATEKISRTLQLV 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II + ++K+PATR+FQAIRIYIN EL L AL L +GR+ +ISFHSL
Sbjct: 187 QIIADVVPFKDKHKHPATRSFQAIRIYINSELDELEKALNSALTVLAPEGRLSIISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ +K + + LPI
Sbjct: 247 EDRMVKQFMRKQSKGETVPKGLPI 270
>gi|294635001|ref|ZP_06713518.1| S-adenosyl-methyltransferase MraW [Edwardsiella tarda ATCC 23685]
gi|451965697|ref|ZP_21918954.1| 16S rRNA methyltransferase RsmH [Edwardsiella tarda NBRC 105688]
gi|291091600|gb|EFE24161.1| S-adenosyl-methyltransferase MraW [Edwardsiella tarda ATCC 23685]
gi|451315499|dbj|GAC64316.1| 16S rRNA methyltransferase RsmH [Edwardsiella tarda NBRC 105688]
Length = 314
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 197/287 (68%), Gaps = 9/287 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +GIYID TFG+GGHS IL +LG +GRLIAID+D ++++ +
Sbjct: 10 VLLDEAVAGLNL---RSDGIYIDGTFGRGGHSRLILSQLGAEGRLIAIDRDPQAIAAAAQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RFSI+H F+ L +++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDARFSIVHGPFSALAEYVEELGLVGRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITPITRTKQLVE 404
RMD +RG+SA+ WL A E +I V++ +GEERFAK+IA+ IV R+ P+TRT++L
Sbjct: 127 RMDPSRGLSAADWLMQAEEEDIAWVLKTFGEERFAKRIARAIVERNRTEAPLTRTRELAA 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I ++ +++K+PATR+FQAIRIYIN EL + AL+ L GR+ VISFHSLE
Sbjct: 187 LISEASPFKEKHKHPATRSFQAIRIYINSELDEIERALEGALAVLAPAGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFE----PKMKFLARCKPKKK 507
DR+VK FI ++ P + + LP+ + P++K L + P ++
Sbjct: 247 DRLVKRFIRQYSRGPQVPKGLPLTEAQLQAQGGPQLKALGKRMPGEQ 293
>gi|88858794|ref|ZP_01133435.1| S-adenosyl-methyltransferase [Pseudoalteromonas tunicata D2]
gi|88819020|gb|EAR28834.1| S-adenosyl-methyltransferase [Pseudoalteromonas tunicata D2]
Length = 312
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 190/276 (68%), Gaps = 5/276 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ + E I+ L+I + +GIYID TFG+GGHS +IL++LG+ GRL AID+D +++ +
Sbjct: 10 VLMEETIDALDI---KPDGIYIDGTFGRGGHSGEILKKLGENGRLQAIDRDPQAIKAAQR 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI HN F+E+ ++ ++ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDARFSIAHNTFSEIKLVAEEADLIGKVDGILLDIGVSSPQLDDAERGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + G SA++WLA A I VI+ YGEE+F ++IA +I+ R TPIT T QL +
Sbjct: 127 MRMNPSAGRSAAEWLAVADLEEITWVIKTYGEEKFGRRIAHKILETRVHTPITSTAQLAK 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I +++ ++K+PATR FQAIRIYIN EL+ ++ AL + L GR+VVISFHSLE
Sbjct: 187 LIDEAVPVKDKHKHPATRAFQAIRIYINSELEEITTALSASLEVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA 500
DRIVK FI +K + R LP+ N + K+ A
Sbjct: 247 DRIVKQFIKKQSKGEALPRGLPLTNAQLQQKLTLKA 282
>gi|421541742|ref|ZP_15987857.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM255]
gi|421566838|ref|ZP_16012579.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3001]
gi|402319222|gb|EJU54733.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM255]
gi|402344781|gb|EJU79914.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM3001]
Length = 328
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD RG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTMRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|262831557|sp|A9M2I4.2|RSMH_NEIM0 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 328
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 188/282 (66%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD RG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTMRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIAGRALKP 290
>gi|345874746|ref|ZP_08826546.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Neisseria
weaveri LMG 5135]
gi|343970105|gb|EGV38303.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Neisseria
weaveri LMG 5135]
Length = 321
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 179/253 (70%), Gaps = 5/253 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++N +GIY+D TFG+GGHS +L +LGK GRL+ DKD +++++
Sbjct: 9 VLLHETVDSLAVKN---DGIYVDGTFGRGGHSRLLLSKLGKNGRLVVFDKDPQAIAVAES 65
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++H+ F L + I KIDG +FDLGISS QI++ RGFSF D PLD
Sbjct: 66 LAAEDERVSVVHDGFVNFQTALGELGIDKIDGAMFDLGISSPQIDDGRRGFSFRFDAPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++WLA+ATE I +VI++YGEERF+++IA+ IV R PI T++L E
Sbjct: 126 MRMDTTRGVSAAEWLASATEQEIHEVIKNYGEERFSRQIARAIVVQREEAPIDTTRKLAE 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ K++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 186 LVAKNVRTRERGQDPATRTFQAIRIFINRELEEVEGVLPQVVGRLKSGGRLAVIAFHSLE 245
Query: 465 DRIVKNFINFNTK 477
DRIVK F+ +++
Sbjct: 246 DRIVKQFMKKHSQ 258
>gi|386019663|ref|YP_005937687.1| S-adenosyl-methyltransferase MraW [Pseudomonas stutzeri DSM 4166]
gi|327479635|gb|AEA82945.1| S-adenosyl-methyltransferase MraW [Pseudomonas stutzeri DSM 4166]
Length = 315
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 189/290 (65%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L++ R +G Y+D TFG+GGHS +L++LG G+L+ DKD +++ G
Sbjct: 12 VLLDEAVAALSV---RADGRYLDGTFGRGGHSRLLLQQLGPNGQLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + ++ + + GIL DLG+SS Q+++ +RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGDEVAQRGWMGAVSGILLDLGVSSPQLDDPIRGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SAS+W+A+A E I +V +DYGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGVSASEWIASADEDEIARVFKDYGEERFAKRMARAVVQRRAEAPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RI+IN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTDANPAWEKGKNPATRAFQGLRIHINNELGDLECGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K + R LPI FEP++K + + + + +K
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLIGKPQYASEAEVK 298
>gi|297539600|ref|YP_003675369.1| S-adenosyl-methyltransferase MraW [Methylotenera versatilis 301]
gi|297258947|gb|ADI30792.1| S-adenosyl-methyltransferase MraW [Methylotenera versatilis 301]
Length = 316
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 197/306 (64%), Gaps = 7/306 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I + +G+Y+D TFG+GGHS KILE+LG GRLIA D+D +++ +
Sbjct: 14 VLLEEAVQALAI---KADGVYVDGTFGRGGHSRKILEKLGSSGRLIAFDRDLKAIESSKE 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RFS++H+ F + L + + K+DGIL DLGISS QI++ RGFSF D PLDMR
Sbjct: 71 ITDPRFSMVHSHFAGMQAELSEMGVSKVDGILLDLGISSPQIDDASRGFSFRYDAPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD + G +A+ +LAN TE ++ +VI++YGEERFAK+IA+ I+ R+ IT T QL ++
Sbjct: 131 MDQSSGQTAADFLANTTEQHLGEVIKNYGEERFAKQIARAIITERNDGRAITTTGQLAKV 190
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ ++ + +NPATRTFQA+RIY+NQEL+ LS+ + L +GR+ VISFHSLED
Sbjct: 191 VAGAVTRFEPGQNPATRTFQALRIYVNQELEELSLTMPQCLALLAPQGRLAVISFHSLED 250
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KPKKKLNIKKYEDYCPNGLQV 523
RIVK FI + P+ L +PK+K + + KP K +K L+V
Sbjct: 251 RIVKQFIRDQENRDDLPANFPVRAADLPQPKLKGVGKTIKPSTK-EVKANPRSRSAVLRV 309
Query: 524 EGRSNI 529
R+N+
Sbjct: 310 AERTNV 315
>gi|237749401|ref|ZP_04579881.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229380763|gb|EEO30854.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 259
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 167/229 (72%), Gaps = 11/229 (4%)
Query: 496 MKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAIL 555
+KFLA +L I DYCPNG+QVEG+ +I+ IV+GVTASL LI+ A+D++AD +L
Sbjct: 16 LKFLA-----DELKISLIRDYCPNGMQVEGQPDISSIVSGVTASLALIEAAIDLHADTLL 70
Query: 556 VHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCT 615
VHHGYFW+ EN IVG K+KR+ L+ N INL AYHLPLD HP+LGNN QLAK+L+F T
Sbjct: 71 VHHGYFWRNENECIVGPKQKRIRLLLQNNINLIAYHLPLDCHPELGNNVQLAKVLDFRPT 130
Query: 616 RRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCT 675
RF +N++GW+G+++N I T+ +L I +++ +KP+++G+ +K+ IGWCT
Sbjct: 131 GRFGENDLGWLGQMMN------PGITTVGELADMIEKRLNRKPLLVGNPQQKLETIGWCT 184
Query: 676 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GAAQ+LL DA + ++SGE+SE TV+ +RE G+AY A GHHATERY
Sbjct: 185 GAAQDLLPDAAMNNASVFLSGEVSERTVHEAREYGIAYLACGHHATERY 233
>gi|269137987|ref|YP_003294687.1| S-adenosyl-methyltransferase MraW [Edwardsiella tarda EIB202]
gi|387866721|ref|YP_005698190.1| S-adenosyl-methyltransferase MraW [Edwardsiella tarda FL6-60]
gi|267983647|gb|ACY83476.1| S-adenosyl-methyltransferase MraW [Edwardsiella tarda EIB202]
gi|304558034|gb|ADM40698.1| S-adenosyl-methyltransferase MraW [Edwardsiella tarda FL6-60]
Length = 313
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 196/286 (68%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +GIYID TFG+GGHS IL +LG +GRLIAID+D ++++ +
Sbjct: 10 VLLDEAVAGLNL---RSDGIYIDGTFGRGGHSRLILSQLGAEGRLIAIDRDPQAIAAAAQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F+ L +++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIVHGPFSALADYVQEMGLSGRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A E +I V++ +GEERFAK+IA+ IV P+TRT++L +
Sbjct: 127 RMDPSRGLSAAQWLMQAEEEDIAWVLKTFGEERFAKRIARAIVERNRTEPLTRTRELAAL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ +++K+PATR+FQAIRIYIN EL + AL+ L +GR+ VISFHSLED
Sbjct: 187 ISEASPFKEKHKHPATRSFQAIRIYINSELDEIERALEGALVALAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFE----PKMKFLARCKPKKK 507
R+VK F+ ++ P + + LP+ + P++K L + P ++
Sbjct: 247 RLVKRFMRQYSRGPQVPKGLPLTEAQLQAQGGPQLKALGKRMPGER 292
>gi|261345652|ref|ZP_05973296.1| S-adenosyl-methyltransferase MraW [Providencia rustigianii DSM
4541]
gi|282566134|gb|EFB71669.1| S-adenosyl-methyltransferase MraW [Providencia rustigianii DSM
4541]
Length = 317
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 187/286 (65%), Gaps = 11/286 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LN+ + NGIYID TFG+GGHS IL +LG+ GRLIAID+D E++ +
Sbjct: 11 VLLDEAVNGLNL---KPNGIYIDGTFGRGGHSRLILSQLGENGRLIAIDRDPEAIKAAQE 67
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+ + D ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFMIKHGPFSAIADYAEEEGLVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV---HYRSITPITRTKQL 402
RMD T G SA++WL A +I V++ +GEERFAK+IA+ IV H P+TRT+ L
Sbjct: 128 RMDPTHGQSAAQWLMTAEADDIAWVLKTFGEERFAKRIARAIVERNHNPEEEPLTRTRHL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I K R+K+PATR+FQAIRIYIN EL+ + AL L +GR+ VISFHS
Sbjct: 188 AELIAKVSPMKDRHKHPATRSFQAIRIYINSELEEIEKALNGAMSVLAPEGRLSVISFHS 247
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARCKP 504
LEDR+VK FI ++ P + +P+ L K++ L + KP
Sbjct: 248 LEDRLVKRFIRQHSSGPSVPPGIPLTEAQIKELGAAKLRGLGKMKP 293
>gi|254494330|ref|ZP_05107501.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae 1291]
gi|268595426|ref|ZP_06129593.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae 35/02]
gi|268597236|ref|ZP_06131403.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae FA19]
gi|268599411|ref|ZP_06133578.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae MS11]
gi|268682771|ref|ZP_06149633.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID332]
gi|268684819|ref|ZP_06151681.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae SK-92-679]
gi|291043143|ref|ZP_06568866.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae DGI2]
gi|262831552|sp|B4RQD7.2|RSMH_NEIG2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|226513370|gb|EEH62715.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae 1291]
gi|268548815|gb|EEZ44233.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae 35/02]
gi|268551024|gb|EEZ46043.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae FA19]
gi|268583542|gb|EEZ48218.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae MS11]
gi|268623055|gb|EEZ55455.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID332]
gi|268625103|gb|EEZ57503.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae SK-92-679]
gi|291012749|gb|EFE04732.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae DGI2]
Length = 318
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/287 (45%), Positives = 190/287 (66%), Gaps = 17/287 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++I + IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIVRAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI-NFNTKIPHIDRRLPIYNY-----LFEPKMKFLARC-KP 504
DRIVK F+ ++ P LP + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHEP-----LPSWAAVREADLPEPPLKIVGRALKP 290
>gi|304386665|ref|ZP_07368947.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis ATCC
13091]
gi|304339250|gb|EFM05328.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis ATCC
13091]
Length = 328
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++ ATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDSATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHAPLPRWAAVREADLPEPPLKIVGRALKP 290
>gi|77361427|ref|YP_341002.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas haloplanktis
TAC125]
gi|88909212|sp|Q3IFZ6.1|RSMH_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|76876338|emb|CAI87560.1| S-adenosyl-dependent methyltransferase [Pseudoalteromonas
haloplanktis TAC125]
Length = 312
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 184/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG +GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGSEGRLQAIDQDPQAIKSAEK 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF+I H F+ L + ++ + I K+DGIL D+G+SS Q+++ LRGFSF+ DGPLD
Sbjct: 67 FADDPRFAIAHTRFSNLYGVAEQNDLIGKVDGILLDIGVSSPQLDDALRGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ GEE+F K+IA +++ R TPIT TKQL +
Sbjct: 127 MRMDPTTGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKVLEVREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQSAIKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI ++ + R LP+ +
Sbjct: 247 DRIVKQFIRKQSRGETLPRGLPLTD 271
>gi|319791660|ref|YP_004153300.1| s-adenosyL-methyltransferase mraw [Variovorax paradoxus EPS]
gi|315594123|gb|ADU35189.1| S-adenosyl-methyltransferase MraW [Variovorax paradoxus EPS]
Length = 307
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/284 (49%), Positives = 183/284 (64%), Gaps = 13/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L + G Y+DATFG+GGH+ IL RL +GRLIA DKD E+V+ +
Sbjct: 10 VLLNEAVEALLSGSTAATGTYVDATFGRGGHARAILARLAPEGRLIAFDKDAEAVAEAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I+D+RFSI H F L + ++G+L DLG+SS QI+N +RGFSF DGPLDMR
Sbjct: 70 ISDARFSIRHQGFRSLGELPDA----SVNGLLMDLGVSSPQIDNPVRGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S ++WLA A I +VI+DYGEERFA +IAK IV R PI+ T +L E+
Sbjct: 126 MDTTRGESVAEWLATAELQQIAEVIRDYGEERFAVQIAKAIVARRQERGPISTTTELAEL 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ ++ +NPATRTFQA RI+IN EL+ L AL+ L GR+ VISFHSLED
Sbjct: 186 VAGTVKTREQGQNPATRTFQAFRIFINAELEELQQALEASLSVLQPGGRLAVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPK-MKF--LARCKPKK 506
RIVK FI ++K + DRR P PK MK L R KP +
Sbjct: 246 RIVKQFIAKHSKEVY-DRRAPFAA----PKVMKLNALERIKPSE 284
>gi|219870383|ref|YP_002474758.1| S-adenosyl-methyltransferase MraW [Haemophilus parasuis SH0165]
gi|263456048|sp|B8F3A8.1|RSMH_HAEPS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|219690587|gb|ACL31810.1| S-adenosyl-methyltransferase MraW involved in cell envelope
biogenesis [Haemophilus parasuis SH0165]
Length = 312
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/264 (50%), Positives = 185/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIY+D TFG+GGHS IL +LG++GRLIAID+D +++ N
Sbjct: 10 VLLHEAVDGLAI---KPNGIYVDGTFGRGGHSRLILSKLGEQGRLIAIDRDPRAIAEANT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF I+H+ F+ + I + N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFQIVHSAFSSIPDICDELNLVGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA +WLA + ++ V++++GEERFAK+IA+ +V Y +S T I+RT QL
Sbjct: 127 RMDTTKGLSAMEWLAQVSVDDLAWVLKEFGEERFAKRIAQAVVSYNKSATEKISRTLQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II + ++K+PATR+FQAIRIYIN EL L AL L +GR+ +ISFHSL
Sbjct: 187 QIIADVVPFKDKHKHPATRSFQAIRIYINSELDELEKALNSALTVLAPEGRLSIISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ +K + + LPI
Sbjct: 247 EDRMVKQFMRKQSKGETVPKGLPI 270
>gi|339493054|ref|YP_004713347.1| Ribosomal RNA small subunit methyltransferase H [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338800426|gb|AEJ04258.1| Ribosomal RNA small subunit methyltransferase H [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 315
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 188/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +G Y+D TFG+GGHS +L++LG G+L+ DKD +++ G
Sbjct: 12 VLLDEAVAALNV---RADGRYLDGTFGRGGHSRLLLQQLGPNGQLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + ++ + GIL DLG+SS Q+++ +RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGDEVAQRGWTGGVSGILLDLGVSSPQLDDPIRGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A+A E I +V +DYGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGVSAAEWIASADEDEIARVFKDYGEERFAKRMARAVVQRRAEAPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RI+IN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTDANPAWEKGKNPATRAFQGLRIHINNELGDLECGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K + R LPI FEP++K + + + + +K
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLIGKPQYASEAEVK 298
>gi|15676324|ref|NP_273460.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis MC58]
gi|416195319|ref|ZP_11617687.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis CU385]
gi|433487591|ref|ZP_20444768.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M13255]
gi|433504335|ref|ZP_20461279.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 9506]
gi|433506547|ref|ZP_20463464.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 9757]
gi|433508582|ref|ZP_20465465.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 12888]
gi|433510662|ref|ZP_20467503.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 4119]
gi|20139199|sp|Q9K0Z0.1|RSMH_NEIMB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|7225634|gb|AAF40850.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|325140926|gb|EGC63433.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis CU385]
gi|389605067|emb|CCA43991.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis alpha522]
gi|432225485|gb|ELK81227.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M13255]
gi|432243232|gb|ELK98746.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 9506]
gi|432243871|gb|ELK99376.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 9757]
gi|432249465|gb|ELL04872.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 12888]
gi|432249876|gb|ELL05275.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 4119]
Length = 328
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRRIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|416181857|ref|ZP_11611798.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M13399]
gi|325134878|gb|EGC57511.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M13399]
Length = 328
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQAALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|421549966|ref|ZP_15995973.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 69166]
gi|433470698|ref|ZP_20428095.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 68094]
gi|433476991|ref|ZP_20434317.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 70012]
gi|433521195|ref|ZP_20477895.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 61103]
gi|433525436|ref|ZP_20482077.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 69096]
gi|433538166|ref|ZP_20494651.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 70030]
gi|402330880|gb|EJU66223.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 69166]
gi|432211374|gb|ELK67327.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 68094]
gi|432216912|gb|ELK72784.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 70012]
gi|432262233|gb|ELL17477.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 61103]
gi|432263032|gb|ELL18261.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 69096]
gi|432275491|gb|ELL30562.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 70030]
Length = 328
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|416200849|ref|ZP_11619746.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 961-5945]
gi|421539614|ref|ZP_15985773.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 93004]
gi|421543845|ref|ZP_15989932.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM140]
gi|421545874|ref|ZP_15991931.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM183]
gi|421552198|ref|ZP_15998177.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM576]
gi|325142966|gb|EGC65323.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 961-5945]
gi|402321108|gb|EJU56587.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 93004]
gi|402325028|gb|EJU60442.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM183]
gi|402325104|gb|EJU60516.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM140]
gi|402332351|gb|EJU67678.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM576]
Length = 328
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|283379446|dbj|BAI66129.1| S-adenosyl-methyltransferase [Neisseria gonorrhoeae]
gi|283379452|dbj|BAI66134.1| S-adenosyl-methyltransferase [Neisseria gonorrhoeae]
Length = 314
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/287 (45%), Positives = 190/287 (66%), Gaps = 17/287 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 8 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 64
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 65 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 124
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++I + IV R+ +PI T++L +
Sbjct: 125 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIVRAIVAQRAESPIDTTRKLAQ 184
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 185 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 244
Query: 465 DRIVKNFI-NFNTKIPHIDRRLPIYNY-----LFEPKMKFLARC-KP 504
DRIVK F+ ++ P LP + L EP +K + R KP
Sbjct: 245 DRIVKQFVKKYSQHEP-----LPSWAAVREADLPEPPLKIVGRALKP 286
>gi|421554221|ref|ZP_16000169.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 98008]
gi|402333491|gb|EJU68794.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 98008]
Length = 328
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|441503421|ref|ZP_20985427.1| rRNA small subunit methyltransferase H [Photobacterium sp. AK15]
gi|441428919|gb|ELR66375.1| rRNA small subunit methyltransferase H [Photobacterium sp. AK15]
Length = 315
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 194/284 (68%), Gaps = 13/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+++ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLHESVDGLAI---KPDGIYIDGTFGRGGHSRLILSQLGENGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ ++ +++ + I ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMEKYMEERDLIGRVDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G+SAS+WLA A +I V++++GEERFAK+IA+ IV YR P+TRT QL
Sbjct: 127 RMDPTSGVSASEWLAEADADDIAWVLKEFGEERFAKRIARGIVAYRENEENEPLTRTLQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++I + ++K+PATR+FQAIRIYIN EL+ + AL L +GR+ VISFHS
Sbjct: 187 AKLIAEVSPFRDKHKHPATRSFQAIRIYINSELEEIDTALHGALNVLAPEGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKP 504
LEDR+VK FI +K P + LP L E ++K L A KP
Sbjct: 247 LEDRMVKRFIRKQSKGPEVPAGLP----LTEDQIKALGSAALKP 286
>gi|358638721|dbj|BAL26018.1| S-adenosyl-methyltransferase [Azoarcus sp. KH32C]
Length = 312
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 182/278 (65%), Gaps = 4/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L++ R +GIY+D TFG+GGHS IL RLG GRLIA D+D ++ G
Sbjct: 10 VLLSEAVDALDV---RADGIYVDGTFGRGGHSRAILSRLGSHGRLIAFDRDPMAIQAGQA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+TD RF ++H F+ L L + I +DG+L DLG+SS Q + RG SF D PLDMR
Sbjct: 67 LTDPRFVLVHAPFSALGEELDRLGIAHVDGVLLDLGVSSPQFDEPARGMSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD TRG + ++WLA A+ I +V++DYGEERFA IAK I R+ I T QL I+
Sbjct: 127 MDTTRGQTVAEWLAEASVAEITEVLRDYGEERFAYAIAKAIAAARTGGAIATTGQLAAIV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
K++R + ++PATR+FQA+RI+IN+EL+ LS+ L ++L GR+ VISFHSLEDR
Sbjct: 187 EKTVRTREPGQHPATRSFQALRIFINRELEELSLILPEAVRRLKPHGRLAVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCK 503
IVK F+ ++ P + RLP+ L +P++ + + +
Sbjct: 247 IVKRFMRDESRPPQLPARLPVRAADLPKPRLVLVGKSQ 284
>gi|121635455|ref|YP_975700.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis FAM18]
gi|416176655|ref|ZP_11609766.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M6190]
gi|416190524|ref|ZP_11615773.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis ES14902]
gi|416212071|ref|ZP_11621676.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M01-240013]
gi|433491910|ref|ZP_20449010.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM586]
gi|433493992|ref|ZP_20451067.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM762]
gi|433496174|ref|ZP_20453220.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M7089]
gi|433498257|ref|ZP_20455272.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M7124]
gi|433500193|ref|ZP_20457183.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM174]
gi|433502187|ref|ZP_20459157.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM126]
gi|262825519|sp|A1KVM4.1|RSMH_NEIMF RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|120867161|emb|CAM10928.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
gi|325132957|gb|EGC55634.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M6190]
gi|325138945|gb|EGC61495.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis ES14902]
gi|325144950|gb|EGC67233.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis
M01-240013]
gi|432230311|gb|ELK85988.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM586]
gi|432231783|gb|ELK87441.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM762]
gi|432236538|gb|ELK92145.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M7124]
gi|432236940|gb|ELK92543.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis M7089]
gi|432237380|gb|ELK92975.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM174]
gi|432242861|gb|ELK98376.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis NM126]
Length = 328
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQAALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|254805557|ref|YP_003083778.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis alpha14]
gi|433466629|ref|ZP_20424090.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 87255]
gi|254669099|emb|CBA07673.1| S-adenosyl-methyltransferase [Neisseria meningitidis alpha14]
gi|432204739|gb|ELK60778.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 87255]
Length = 328
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQAALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|145297477|ref|YP_001140318.1| S-adenosyl-methyltransferase MraW [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418360609|ref|ZP_12961283.1| S-adenosyl-methyltransferase MraW [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|263446607|sp|A4SI48.1|RSMH_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|142850249|gb|ABO88570.1| S-adenosyl-methyltransferase MraW [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356688210|gb|EHI52773.1| S-adenosyl-methyltransferase MraW [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 312
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL+ LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQHLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGIVSYLDERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAQWLARADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L +GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALQALAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + R +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPRGIPL 268
>gi|194099359|ref|YP_002002459.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae NCCP11945]
gi|240014790|ref|ZP_04721703.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae DGI18]
gi|240017238|ref|ZP_04723778.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae FA6140]
gi|240121313|ref|ZP_04734275.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID24-1]
gi|385336323|ref|YP_005890270.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193934649|gb|ACF30473.1| S-adenosyl-methyltransferase [Neisseria gonorrhoeae NCCP11945]
gi|317164866|gb|ADV08407.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 306
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 189/286 (66%), Gaps = 17/286 (5%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ ++
Sbjct: 1 MLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEEL 57
Query: 288 --TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLDM
Sbjct: 58 ARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++W+A A+E ++ +VI++YGEERF+++I + IV R+ +PI T++L +I
Sbjct: 118 RMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIVRAIVAQRAESPIDTTRKLAQI 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLED
Sbjct: 178 VAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLED 237
Query: 466 RIVKNFI-NFNTKIPHIDRRLPIYNY-----LFEPKMKFLARC-KP 504
RIVK F+ ++ P LP + L EP +K + R KP
Sbjct: 238 RIVKQFVKKYSQHEP-----LPSWAAVREADLPEPPLKIVGRALKP 278
>gi|238918670|ref|YP_002932184.1| S-adenosyl-methyltransferase MraW, putative [Edwardsiella ictaluri
93-146]
gi|263447473|sp|C5B9E8.1|RSMH_EDWI9 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|238868238|gb|ACR67949.1| S-adenosyl-methyltransferase MraW, putative [Edwardsiella ictaluri
93-146]
Length = 313
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 195/286 (68%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +GIYID TFG+GGHS IL +LG +GRLIAID+D ++++ +
Sbjct: 10 VLLDEAVAGLNL---RSDGIYIDGTFGRGGHSRLILSQLGAEGRLIAIDRDPQAIAAAAQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L +++ + +IDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSALADYVQEMGLSSRIDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG+SA++WL A E +I V++ +GEERFAK+IA+ IV P++RT++L +
Sbjct: 127 RMDPSRGLSAAQWLMQAEEDDIAWVLKTFGEERFAKRIARAIVERNRTEPLSRTRELAAL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + +++K+PATR+FQAIRIYIN EL + AL+ L +GR+ VISFHSLED
Sbjct: 187 ISDASPFKEKHKHPATRSFQAIRIYINSELDEIERALEGALVALAPQGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFE----PKMKFLARCKPKKK 507
R+VK FI ++ P + + LP+ + P++K L + P ++
Sbjct: 247 RLVKRFIRQYSRGPQVPKGLPLTEAQLQAQGGPQLKALGKRMPGER 292
>gi|423198465|ref|ZP_17185048.1| ribosomal RNA small subunit methyltransferase H [Aeromonas
hydrophila SSU]
gi|404630184|gb|EKB26885.1| ribosomal RNA small subunit methyltransferase H [Aeromonas
hydrophila SSU]
Length = 312
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 179/262 (68%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL++LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQQLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+++ L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSDITTYLSERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAEWLARADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L +GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALQVLAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPHGIPL 268
>gi|225023749|ref|ZP_03712941.1| hypothetical protein EIKCOROL_00613 [Eikenella corrodens ATCC
23834]
gi|224943631|gb|EEG24840.1| hypothetical protein EIKCOROL_00613 [Eikenella corrodens ATCC
23834]
Length = 318
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/253 (47%), Positives = 172/253 (67%), Gaps = 5/253 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + + G+Y+D TFG+GGHS IL +LG GRL+ DKD +++++ +
Sbjct: 11 VLLHEAVDALEV---KPGGVYVDGTFGRGGHSRLILSKLGANGRLVVFDKDPQAIAVARQ 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R ++H F+ + LK I+ +DG LFDLG+SS QI++ RGFSF D PLD
Sbjct: 68 LAEVDKRVQVVHGGFSGFQVALKGLGIEAVDGALFDLGVSSPQIDDAERGFSFRYDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG +A++WLA A E I++VI+DYGEERF +IA+ IV R PI T QL +
Sbjct: 128 MRMDTTRGQTAAQWLAEAGEEEIREVIRDYGEERFNSQIARAIVQQRQERPILTTGQLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+ +++R +R ++PATRTFQAIRI+IN+EL+ +S L L GR+ VI+FHSLE
Sbjct: 188 LAAQAVRTRERGQDPATRTFQAIRIFINRELEEISAVLPQAAGYLKTGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTK 477
DRIVK FI +++
Sbjct: 248 DRIVKQFIRRHSR 260
>gi|404379085|ref|ZP_10984156.1| ribosomal RNA small subunit methyltransferase H [Simonsiella
muelleri ATCC 29453]
gi|294483437|gb|EFG31122.1| ribosomal RNA small subunit methyltransferase H [Simonsiella
muelleri ATCC 29453]
Length = 320
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/253 (50%), Positives = 173/253 (68%), Gaps = 6/253 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ LNI R +G+Y+D TFG+GGHS IL RLG+ GRLI DKD +++ + +
Sbjct: 12 VLLHEAVDALNI---RADGVYVDGTFGRGGHSRLILSRLGESGRLIVFDKDPQAIEVAQE 68
Query: 287 IT--DSRFSIIHNCFTELDIILK-KYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D R +IHN F+ + LK + IDG LFDLGISS QI++ RGFSF D PL
Sbjct: 69 LAKQDKRVKVIHNGFSHFQVALKNDLGLNHIDGALFDLGISSPQIDDASRGFSFRFDAPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG SA+ WLA A E I +VI++YGEERF+++IA+ IV R +PI T QL
Sbjct: 129 DMRMDTTRGQSAADWLAIADEQEIHEVIKNYGEERFSRQIARAIVTQREDSPIITTNQLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I + +R +R ++PATRTFQAIRI+IN+EL + L LNI GR+ VI+FHSL
Sbjct: 189 KITAQVVRTRERGQDPATRTFQAIRIFINRELDEIQAVLPQVVAHLNIGGRLAVIAFHSL 248
Query: 464 EDRIVKNFINFNT 476
EDR+VK FI ++
Sbjct: 249 EDRLVKQFIRTHS 261
>gi|419953370|ref|ZP_14469515.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri TS44]
gi|387969962|gb|EIK54242.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri TS44]
Length = 315
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 181/282 (64%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R G Y+D TFG+GGHS +L +LG +GRL+ DKD +++ G
Sbjct: 12 VLLDEAVAALAV---RPAGRYLDGTFGRGGHSRLLLGQLGPEGRLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + ++ + GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGDEVAQRGWTGTLSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A A E I +V +DYGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGVSAAEWIAQAGEEEIARVFKDYGEERFAKRMARAVVQRRAEKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTDANPAWEKGKNPATRAFQGLRIYINNELGDLETGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K + R LPI FEP++K L + +
Sbjct: 249 EDRIVKQFMRRHAKGEADQLPRGLPIIPKAFEPRLKLLGKAQ 290
>gi|385852596|ref|YP_005899110.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis H44/76]
gi|427827245|ref|ZP_18994286.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis H44/76]
gi|316984918|gb|EFV63874.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis H44/76]
gi|325199600|gb|ADY95055.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis H44/76]
Length = 316
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 175/248 (70%), Gaps = 5/248 (2%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ ++
Sbjct: 1 MLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEEL 57
Query: 288 --TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLDM
Sbjct: 58 ARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +I
Sbjct: 118 RMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRRIARAIVAQRAESPIDTTRKLAQI 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLED
Sbjct: 178 VAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLED 237
Query: 466 RIVKNFIN 473
RIVK F+
Sbjct: 238 RIVKQFVK 245
>gi|398809554|ref|ZP_10568401.1| S-adenosyl-methyltransferase MraW [Variovorax sp. CF313]
gi|398085643|gb|EJL76295.1| S-adenosyl-methyltransferase MraW [Variovorax sp. CF313]
Length = 307
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 180/279 (64%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ + + G Y+DATFG+GGH+ IL RL +GRLIA DKD E+V+ +
Sbjct: 10 VLLNEAVEAVLSGSTAATGTYVDATFGRGGHARAILSRLAPEGRLIAFDKDAEAVAEAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I+D+RFSI H F L + +DG+L DLG+SS QI+N +RGFSF DGPLDMR
Sbjct: 70 ISDARFSIRHQGFRSLG----ELPDASVDGLLMDLGVSSPQIDNPVRGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S ++WLA A I +VI+DYGEERFA +IAK IV R I+ T +L E+
Sbjct: 126 MDTTRGESVAEWLATAELPQIAEVIRDYGEERFAVQIAKAIVARRQERGAISTTTELAEL 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ ++ +NPATRTFQA RI+IN EL+ L AL+ L GR+ VISFHSLED
Sbjct: 186 VAGTVKTREQGQNPATRTFQAFRIFINAELEELQQALEASLSVLKPHGRLAVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKP 504
RIVK FI ++K + DRR P K++ L R KP
Sbjct: 246 RIVKQFIAKHSKEVY-DRRAPFAAPKVM-KLRALERIKP 282
>gi|59801880|ref|YP_208592.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae FA 1090]
gi|268601983|ref|ZP_06136150.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID18]
gi|268604315|ref|ZP_06138482.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID1]
gi|268687198|ref|ZP_06154060.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae
SK-93-1035]
gi|293398479|ref|ZP_06642657.1| methylase MraW [Neisseria gonorrhoeae F62]
gi|68565408|sp|Q5F6K7.1|RSMH_NEIG1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|59718775|gb|AAW90180.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|268586114|gb|EEZ50790.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID18]
gi|268588446|gb|EEZ53122.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae PID1]
gi|268627482|gb|EEZ59882.1| S-adenosyl-methyltransferase MraW [Neisseria gonorrhoeae
SK-93-1035]
gi|291610950|gb|EFF40047.1| methylase MraW [Neisseria gonorrhoeae F62]
Length = 318
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 190/287 (66%), Gaps = 17/287 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A A+E ++ +VI++YGEERF+++I + IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIVRAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAIRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFI-NFNTKIPHIDRRLPIYNYLFE-----PKMKFLARC-KP 504
DRIVK F+ ++ P LP + + E P +K + R KP
Sbjct: 249 DRIVKQFVKKYSQHEP-----LPSWAAVREADLPDPPLKIVGRALKP 290
>gi|421863467|ref|ZP_16295164.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379057|emb|CBX22359.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 319
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 187/282 (66%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + R +G+Y+D TFG+GGHS IL RLG GRL+ DKD +V+ +
Sbjct: 12 VLLHEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLVVFDKDPRAVAAAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R S++H F L I +DG LFDLG+SS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVSVVHGGFASFQTALDDLGIGDVDGALFDLGVSSPQIDDAARGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A+A+E ++ +VI++YGEERF+++IA+ IV R+ PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIASASEQDLHEVIKNYGEERFSRQIARAIVAQRAENPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LAAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMCRLKQGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + + KP
Sbjct: 249 DRIVKQFVGKYSRHAPLPRWAAVREADLPEPPLKIVGKALKP 290
>gi|385340662|ref|YP_005894534.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis G2136]
gi|325198906|gb|ADY94362.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis G2136]
Length = 316
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 175/248 (70%), Gaps = 5/248 (2%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ ++
Sbjct: 1 MLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEEL 57
Query: 288 --TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLDM
Sbjct: 58 ARSDKRVGVVHGGFASFQAALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLDM 117
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +I
Sbjct: 118 RMDTTRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQI 177
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLED
Sbjct: 178 VAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLED 237
Query: 466 RIVKNFIN 473
RIVK F+
Sbjct: 238 RIVKQFVK 245
>gi|114330281|ref|YP_746503.1| S-adenosyl-methyltransferase MraW [Nitrosomonas eutropha C91]
gi|123321952|sp|Q0AJD3.1|RSMH_NITEC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|114307295|gb|ABI58538.1| S-adenosyl-methyltransferase MraW [Nitrosomonas eutropha C91]
Length = 317
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 179/264 (67%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ LNI+ GIY+D T+G+GGHS IL RL K G+LIA DKD ++S
Sbjct: 5 VLLEEAVDALNIQK---GGIYVDGTYGRGGHSRLILSRLDKSGQLIAFDKDPAAISEARS 61
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF +H+ + + L+ I ++DGIL DLG+SS Q++ RGFSF DGPLDMR
Sbjct: 62 ILDERFQAVHSSYAGMYTALQSLGINRVDGILLDLGVSSIQLDEASRGFSFRHDGPLDMR 121
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG +A++WL A+E +K++I+ YGEER+A +IA IV ++ PI+ T +L EI+
Sbjct: 122 MDSSRGKTAAEWLTMASETELKEIIRTYGEERYAGQIASAIVMEQARQPISTTLRLAEIV 181
Query: 407 LKSI--RGNK-RYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+ RG++ ++PATRTFQAIRI++NQEL+ LS+ L + LN GR+VVISFHSL
Sbjct: 182 AAVVRKRGHRDDRQHPATRTFQAIRIHLNQELEELSMTLPQCVELLNTGGRLVVISFHSL 241
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDRIVK F+ T + RRLPI
Sbjct: 242 EDRIVKRFMRMQTGTDTLPRRLPI 265
>gi|407791121|ref|ZP_11138209.1| 16S rRNA m(4)C1402 methyltransferase [Gallaecimonas xiamenensis
3-C-1]
gi|407201459|gb|EKE71459.1| 16S rRNA m(4)C1402 methyltransferase [Gallaecimonas xiamenensis
3-C-1]
Length = 312
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/262 (46%), Positives = 177/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +G+Y+D TFG+GGHS IL +LG GRL++ID+D +++
Sbjct: 7 VLLNESIEALAI---KPDGLYVDGTFGRGGHSRAILAKLGANGRLVSIDRDPAAIAEAKT 63
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D RF+I+ F+ L L + + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 64 ISDPRFTIVQGPFSGLAGYLDELGLSGKVDGLLLDLGVSSPQLDDAERGFSFMRDGPLDM 123
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA+ WL A +I V++ +GEERFA++IA+ IV R++ P++RT +L ++
Sbjct: 124 RMDPTSGESAADWLNRADADDIAFVLKTFGEERFARRIARAIVERRALAPLSRTAELADL 183
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I K+ +++K+PATR+FQAIRIY+N EL + AL K L GR+ VISFHSLED
Sbjct: 184 IAKAAPVKEKHKHPATRSFQAIRIYVNSELDEVKTALDGALKVLATGGRLAVISFHSLED 243
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK FI K P + LP+
Sbjct: 244 RLVKQFIRAQEKGPELPPGLPV 265
>gi|407693016|ref|YP_006817805.1| 16S rRNA m(4)C1402 methyltransferase [Actinobacillus suis H91-0380]
gi|407389073|gb|AFU19566.1| 16S rRNA m(4)C1402 methyltransferase [Actinobacillus suis H91-0380]
Length = 313
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 185/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDARFQIVHTAFSAIPEVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP--ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSVDDLAWVLKTFGEERFAKRIAQAVVSYNKSTTDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMDVPKGLPI 271
>gi|221133797|ref|ZP_03560102.1| S-adenosyl-methyltransferase MraW [Glaciecola sp. HTCC2999]
Length = 310
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 177/263 (67%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L I + +GIYIDATFG+GGHS IL LG+ GRLIA D+D ++ K
Sbjct: 9 VLLHECIEGLAI---KPDGIYIDATFGRGGHSSYILNALGEHGRLIAFDRDPAAIEAAQK 65
Query: 287 -ITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RF+I+H+ F ++D + L I ++DG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 66 FVNDPRFTIVHSAFAQMDEVPLTAGLIDQVDGVLMDLGVSSPQLDDSSRGFSFLRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G+SA +WLA+A E +I +VI+++GEE+F K+IA IV+ R TPI T QL
Sbjct: 126 MRMDTSTGVSAEQWLAHADEQDIAQVIKEFGEEKFGKRIAHAIVNTRVHTPINSTLQLAA 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II +++ ++K+PATR FQ IRIYIN EL L LK K L GR+ ISFHSLE
Sbjct: 186 IIAEAMPVKDKHKHPATRAFQGIRIYINSELDQLRDGLKAAVKLLKPTGRLAAISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ +K ++ +PI
Sbjct: 246 DRMVKRFMREQSKGKNVPHNMPI 268
>gi|421616037|ref|ZP_16057056.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri KOS6]
gi|421618004|ref|ZP_16058985.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri KOS6]
gi|409779999|gb|EKN59644.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri KOS6]
gi|409782219|gb|EKN61786.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri KOS6]
Length = 315
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 188/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS +L++LG G L+ DKD +++ G
Sbjct: 12 VLLDEAVAALTV---RPDGRYLDGTFGRGGHSRLLLQQLGPDGLLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + ++ + + G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGEEVAQRGWVGSVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A+A E I +V +DYGEERFAK++A+ +V R+++P RT L
Sbjct: 129 DMRMDPSRGVSAAEWIASAAEDEIARVFKDYGEERFAKRMARAVVQRRAVSPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ +RI+IN EL +L L L + GR+VVISFHSL
Sbjct: 189 KVLTEANPAWEKGKNPATRAFQGLRIHINNELGDLERGLDAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K + R LPI FEP++K L + + + +K
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLLGKPQYASEAEVK 298
>gi|429212999|ref|ZP_19204164.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. M1]
gi|428157481|gb|EKX04029.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. M1]
Length = 313
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L R G Y+D TFG+GGHS +L RL GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALA---PRAGGCYVDGTFGRGGHSRALLGRLDPGGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F E+ L + ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVVVQRSFAEMGEELAARGLTGQVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A+A E I +V ++YGEERFAK++A+ IV R+ P RT L
Sbjct: 127 DMRMDPSRGVSAAQWIASAAEDEIARVFKEYGEERFAKRMARAIVQRRAEKPFVRTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I ++ ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 AVITEANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALEALAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K ++ R LPI FEP++K L + + + +K
Sbjct: 247 EDRIVKQFMRKHAKGEADNLPRDLPIRAKAFEPRLKLLGKPQYASEAELK 296
>gi|170718775|ref|YP_001783958.1| S-adenosyl-methyltransferase MraW [Haemophilus somnus 2336]
gi|263456057|sp|B0US59.1|RSMH_HAES2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|168826904|gb|ACA32275.1| S-adenosyl-methyltransferase MraW [Haemophilus somnus 2336]
Length = 321
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 197/310 (63%), Gaps = 17/310 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L ++ NGIYID TFG+GGHS IL +L KKG+LIAID+D +++ +
Sbjct: 15 VLLREAVGGLALKE---NGIYIDGTFGRGGHSRFILSQLSKKGQLIAIDRDPQAIQVAQN 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H+ F+ + I +K + KIDGIL DLG+SS Q++N RGFSF+ DGPLDM
Sbjct: 72 IQDPRFRIVHDSFSAIPDICEKLGLTGKIDGILLDLGVSSPQLDNAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA++WL +E ++ V++ +GEERFAK+IA+ IV Y P+ RT
Sbjct: 132 RMDTTQGLSATEWLRQVSEQDLAWVLKTFGEERFAKRIAQAIVGYNKSAVQSGAEPLNRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +S+ +YK+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 LQLAELIAQSVPFKDKYKHPATRSFQAIRIFINSELDELEKVLNGALNVLAPQGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPN 519
FHSLEDR+VK+FI +K + + LP L E +++ + KP K + ++ N
Sbjct: 252 FHSLEDRMVKHFIRKQSKGDDLPKGLP----LREEQIQHNQKLKPVGKAIMPTEQEMAAN 307
Query: 520 GLQVEGRSNI 529
V RS +
Sbjct: 308 ---VRSRSAV 314
>gi|375337384|ref|ZP_09778728.1| S-adenosyl-methyltransferase MraW [Succinivibrionaceae bacterium
WG-1]
Length = 315
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ LNI+ +GIY+D TFG+GGHS IL +L + G L AID+D ++
Sbjct: 11 VLLNEAVEGLNIDP---HGIYLDGTFGRGGHSRLILSKLAEDGHLYAIDRDPRAIEEAKT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF+I+ F+E + +L +N+ K+ GIL DLG+SS Q+++ +RGFSF+ DGPLDM
Sbjct: 68 ITDPRFTILQGRFSEAENLLAPFNVNGKLSGILLDLGVSSPQLDDPMRGFSFMKDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA+A E I +V+ DYGEERFA+KIAK I+ R TP T TK L ++
Sbjct: 128 RMDPTSGESAAQWLAHAEEDEIVRVLHDYGEERFARKIAKAIIFDRQTTPYTSTKALADM 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + I ++ K+PATRTFQAIRI+IN EL ++ L+ L GR+ VISFHSLED
Sbjct: 188 LSRVIPIKEKNKHPATRTFQAIRIHINGELDEVAQILESSESILKESGRLCVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VKNFI K R LPI
Sbjct: 248 RVVKNFIRRKEKGVQPPRGLPI 269
>gi|387771048|ref|ZP_10127220.1| S-adenosyl-methyltransferase MraW [Pasteurella bettyae CCUG 2042]
gi|386902967|gb|EIJ67788.1| S-adenosyl-methyltransferase MraW [Pasteurella bettyae CCUG 2042]
Length = 322
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 186/268 (69%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++++ GIYID TFG+GGHS IL +L + GRLIAID+D ++++ +
Sbjct: 15 VLLHEAVNGLALKDK---GIYIDGTFGRGGHSRLILSQLSENGRLIAIDRDPSAITVAQQ 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H+ F+ + I +K N + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IADPRFHIEHHSFSAIPEICEKLNLVGKIDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD ++G+SA++WL +E ++ V++ +GEERFAK+IA IV Y + P+TRT
Sbjct: 132 RMDTSKGLSAAQWLEQVSESDLAWVLKTFGEERFAKRIAHSIVTYNKNAQQNATKPLTRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
+L E+I +S+ ++K+PATR+FQAIRIYIN EL L LK L +GR+ +IS
Sbjct: 192 LELAELIAQSVPFKDKHKHPATRSFQAIRIYINAELDELESVLKSALTVLAPQGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K + + LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDVPKGLPL 279
>gi|392552619|ref|ZP_10299756.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas spongiae
UST010723-006]
Length = 311
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 183/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L+I + NGIYID TFG+GGHS +IL+RLG +GRL+AID+D ++ K
Sbjct: 10 VLLDETIEALDI---KPNGIYIDGTFGRGGHSGEILKRLGGQGRLVAIDRDPTAIEAAKK 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RF I+H+ F+ + + + N+ ++DGIL D+G+SS Q++ RGFSF+ DGPLD
Sbjct: 67 FADDARFQIVHDRFSNIRQVAENLNLLNQVDGILLDIGVSSPQLDEADRGFSFMHDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G SA++WLA A +I VI+ YGEE+F ++IA +I+ R PIT TKQL +
Sbjct: 127 MRMDPSSGRSAAQWLAEAELEDITFVIKKYGEEKFGRRIATKIIETRDEHPITTTKQLAK 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ ++ AL+ L GR+ VISFHSLE
Sbjct: 187 LVDEAVPVKDKHKHPATRTFQAIRIYINSELEEITTALQGSLDVLKQDGRLAVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K + R LP+ +
Sbjct: 247 DRIVKQFIKKQSKGEAVPRGLPLTD 271
>gi|113460496|ref|YP_718560.1| S-adenosyl-methyltransferase MraW [Haemophilus somnus 129PT]
gi|123031127|sp|Q0I1E1.1|RSMH_HAES1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|112822539|gb|ABI24628.1| S-adenosyl-methyltransferase [Haemophilus somnus 129PT]
Length = 319
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/310 (45%), Positives = 198/310 (63%), Gaps = 17/310 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L ++ NGIYID TFG+GGHS IL +L KKG+LIAID+D +++ +
Sbjct: 13 VLLREAVGGLALKE---NGIYIDGTFGRGGHSRFILSQLSKKGQLIAIDRDPQAIQVAQN 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I+H+ F+ + I +K + KIDGIL DLG+SS Q++N RGFSF+ DGPLDM
Sbjct: 70 IQDSRFRIVHDSFSAIPDICEKLGLTGKIDGILLDLGVSSPQLDNAERGFSFMKDGPLDM 129
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA++WL +E ++ V++ +GEERFAK+IA+ IV Y P+ RT
Sbjct: 130 RMDTTQGLSATEWLRLVSEQDLAWVLKTFGEERFAKRIAQAIVGYNKSAVQSGAEPLNRT 189
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +S+ +YK+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 190 LQLAELIAQSVPFKDKYKHPATRSFQAIRIFINSELDELEKVLNGALNVLAPQGRLSIIS 249
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPN 519
FHSLEDR+VK+FI +K + + LP L E +++ + KP K + ++ N
Sbjct: 250 FHSLEDRMVKHFIRKQSKGDDLPKGLP----LREEQIQHNQKLKPVGKAIMPTEQEMAAN 305
Query: 520 GLQVEGRSNI 529
V RS +
Sbjct: 306 ---VRSRSAV 312
>gi|411011889|ref|ZP_11388218.1| S-adenosyl-methyltransferase MraW [Aeromonas aquariorum AAK1]
Length = 312
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL++LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQQLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGITTYLSERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAEWLARADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L +GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALQVLAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPHGIPL 268
>gi|384082077|ref|ZP_09993252.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium HIMB30]
Length = 308
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 177/278 (63%), Gaps = 5/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I++ +G+Y+D TFG+GGHS IL LG GRLI D+D +V++
Sbjct: 6 VLLHEALTALCIQH---DGVYLDCTFGRGGHSRAILTELGANGRLIGFDRDPSAVAVARD 62
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RF I+H F+EL+ L + ++ GIL DLG+SS Q++ RGFSF DGPLD
Sbjct: 63 LAQEDPRFEIVHTAFSELETALDSLAVSRVHGILMDLGVSSPQLDEAERGFSFQADGPLD 122
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA+ W+A A I V+ +GEERF+++IA+ IV R +TPI T QL +
Sbjct: 123 MRMDPTTGESAADWIARADADEIAHVLWVFGEERFSRRIARAIVEARQLTPIVTTTQLSQ 182
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ + + K+PATR+FQ IR+YIN EL + L+ +L + GR+ VISFHSLE
Sbjct: 183 IVTSAQPKKDQNKHPATRSFQGIRLYINGELTEVEQGLEAAMNRLEVGGRLAVISFHSLE 242
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
DR+VK + ++ P D R+P+ + + +PK+K + +
Sbjct: 243 DRLVKRALRDASRPPKGDPRMPLPDSVAQPKLKLVGKA 280
>gi|260912995|ref|ZP_05919480.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Pasteurella dagmatis ATCC 43325]
gi|260632985|gb|EEX51151.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Pasteurella dagmatis ATCC 43325]
Length = 321
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 184/268 (68%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L ++ ER GIYID TFG+GGHS IL +L GRLIAID+D +++ NK
Sbjct: 15 VLLNEAVDGLALK-ER--GIYIDGTFGRGGHSRLILSKLSDNGRLIAIDRDPRAIAEANK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I HN F+ + I +K + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDARFHIEHNSFSAIPEICEKLGLTGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT------PITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA IV+Y P+TRT
Sbjct: 132 RMDTTQGLSASEWLQQVSESDLAWVLKTFGEERFAKRIASAIVNYNKSAQQNGSGPLTRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +S+ ++K+PATR+FQAIRI+IN EL L L+ L +GR+ +IS
Sbjct: 192 LQLAELIAQSVPFKDKHKHPATRSFQAIRIFINAELDELESVLQSALSVLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K + + LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSKGESLPKGLPL 279
>gi|262831577|sp|A4VIH0.2|RSMH_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 315
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 187/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +G Y+D TFG+GGHS +L++LG G+L+ DKD +++ G
Sbjct: 12 VLLDEAVAALNV---RADGRYLDGTFGRGGHSRLLLQQLGPNGQLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + ++ + GIL DLG+SS Q+++ +RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGDEVAQRGWTGAVSGILLDLGVSSPQLDDPIRGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A+A E I +V +DYGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGVSAAEWIASADEDEIARVFKDYGEERFAKRMARAVVQRRAEAPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ K+PATR FQ +RI+IN EL +L L L + GR+VVISFHSL
Sbjct: 189 KVLTDANPAWEKGKSPATRAFQGLRIHINNELGDLERGLDAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K + R LPI FEP++K + + + + +K
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLIGKPQYASEAEVK 298
>gi|378822273|ref|ZP_09845078.1| S-adenosyl-methyltransferase MraW [Sutterella parvirubra YIT 11816]
gi|378598907|gb|EHY31990.1| S-adenosyl-methyltransferase MraW [Sutterella parvirubra YIT 11816]
Length = 320
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 172/265 (64%), Gaps = 4/265 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
NGIY+D TFG+GGHS +ILE+LG +GRL A D+D E+V ITD RF+IIH F+ +
Sbjct: 24 NGIYVDGTFGRGGHSRRILEKLGPEGRLYAFDRDPEAVVAARGITDPRFTIIHEPFSTMR 83
Query: 304 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
L + ++ G+ D+G+SS QI++ RGFSF +DGPLDMRMD TRG +A++WLA A+
Sbjct: 84 ESLAALGVTEVTGVFLDIGVSSPQIDDAARGFSFRMDGPLDMRMDTTRGETAAEWLARAS 143
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKR--YKNPAT 421
E I++ ++ +GEERFA IA+ IV R +PIT TK L ++ + NK+ ++PAT
Sbjct: 144 EAEIREAVKVFGEERFAGPIARAIVRRRHESPITTTKDLAALVASVVPRNKKDQLQHPAT 203
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIP-H 480
RTFQAIRI +N EL L AL L +GR+ VISFHSLEDRIVK F
Sbjct: 204 RTFQAIRIQVNAELDELRRALSAAGAILRPEGRLAVISFHSLEDRIVKRFFEREAHPERE 263
Query: 481 IDRRLPI-YNYLFEPKMKFLARCKP 504
+D RLPI + L +P+ + R P
Sbjct: 264 LDPRLPIPASQLPQPRFTDVKRIMP 288
>gi|421498872|ref|ZP_15945944.1| Ribosomal RNA small subunit methyltransferase H [Aeromonas media
WS]
gi|407182098|gb|EKE56083.1| Ribosomal RNA small subunit methyltransferase H [Aeromonas media
WS]
Length = 312
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 176/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL++LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQQLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGITSYLSDRGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTTGQSAAQWLARADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALQALATDGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPHGIPL 268
>gi|120555371|ref|YP_959722.1| S-adenosyl-methyltransferase MraW [Marinobacter aquaeolei VT8]
gi|263456394|sp|A1U3G6.1|RSMH_MARAV RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|120325220|gb|ABM19535.1| S-adenosyl-methyltransferase MraW [Marinobacter aquaeolei VT8]
Length = 319
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 187/286 (65%), Gaps = 5/286 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A+++L + NG Y+DATFG+GGHS IL +LG+ G+L+ IDKD E++++ +
Sbjct: 18 VLLDAAVDYLVTDE---NGRYVDATFGRGGHSRLILGKLGQGGQLLGIDKDPEAIAVARE 74
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ DSRF H F ELD+ L++ ++DG+L DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 75 LASGDSRFQWYHGSFAELDLALERQGWSQVDGVLMDLGVSSPQLDDASRGFSFMRDGPLD 134
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + SA++WLA A E I VI YGEERF+++IA+ +V R PI T+QL E
Sbjct: 135 MRMNPQQEPSAAQWLAEADEREIADVIWRYGEERFSRRIARLVVERRQEQPIETTRQLAE 194
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ +++K+PATR FQAIRI+IN+EL++L L +L GR+VVISFHSLE
Sbjct: 195 LVAEAVPKKEKHKHPATRAFQAIRIFINRELEDLEAGLAAAVDRLAPGGRLVVISFHSLE 254
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNI 510
DR+VK F+ + P + + +P+ E + + + + I
Sbjct: 255 DRLVKRFMRDLARGPKLPKGIPVTAEQEESGFQLIGKASKANEQEI 300
>gi|261378431|ref|ZP_05983004.1| S-adenosyl-methyltransferase MraW [Neisseria cinerea ATCC 14685]
gi|269145209|gb|EEZ71627.1| S-adenosyl-methyltransferase MraW [Neisseria cinerea ATCC 14685]
Length = 319
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 192/288 (66%), Gaps = 7/288 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLHEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDTGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R S++H F L I +DG LFDLG+SS QI++ +RGFSF D PLD
Sbjct: 69 LARSDKRVSVVHGGFASFQTALDDLGIGDVDGALFDLGVSSPQIDDAVRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A+A+E ++ +VI++YGEERF+++IA+ IV R+ PI T +L +
Sbjct: 129 MRMDTTRGMSAAEWIASASEQDLHEVIKNYGEERFSRQIARAIVAQRTENPIDTTGKLAK 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IAAENVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KPKKKLNI 510
DRIVK F+ ++ + R + L EP +K + + KP ++ +
Sbjct: 249 DRIVKQFVRKYSQHAPLPRWAAVREADLPEPPLKAVGKAIKPCEEETV 296
>gi|359432525|ref|ZP_09222900.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20652]
gi|392534689|ref|ZP_10281826.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas arctica A
37-1-2]
gi|357920824|dbj|GAA59149.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20652]
Length = 312
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 183/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG +GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGDEGRLQAIDQDPQAIQSAEK 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF+I H F+ L + ++ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDPRFAIAHTRFSNLYEVAEQNDLIGKVDGILLDIGVSSPQLDDAARGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ GEE+F K+IA +++ R TPIT TKQL +
Sbjct: 127 MRMDPTTGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKVLEVREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQSAVKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI ++ + R LP+ +
Sbjct: 247 DRIVKQFIRKQSRGEVLPRGLPLTD 271
>gi|165975468|ref|YP_001651061.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|263446591|sp|B0BRG9.1|RSMH_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|165875569|gb|ABY68617.1| S-adenosyl-methyltransferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 313
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 187/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDTRFQIVHTAFSAIPDVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y +S+T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSADDLAWVLKTFGEERFAKRIAQAVVSYNKSVTDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMDVPKGLPI 271
>gi|124265647|ref|YP_001019651.1| S-adenosyl-methyltransferase MraW [Methylibium petroleiphilum PM1]
gi|167011833|sp|A2SCX7.1|RSMH_METPP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|124258422|gb|ABM93416.1| S-adenosyl-methyltransferase MraW [Methylibium petroleiphilum PM1]
Length = 318
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 185/287 (64%), Gaps = 18/287 (6%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV----S 282
+ L+EA++ L +G Y+D T+G+GGHS IL +L GRL+AID+D ++V S
Sbjct: 13 VLLHEAVDALV---HSPDGYYVDGTYGRGGHSRLILSKLSAAGRLLAIDRDPDAVAHATS 69
Query: 283 LGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
++TD RF I H ++EL +L + +IDG+L D+G+SS QI+N RGFSF GP
Sbjct: 70 GAARVTDPRFHIEHAPYSELPALLAARGVSRIDGLLLDIGVSSPQIDNPERGFSFRASGP 129
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQ 401
LDMRMD TRG SA+ +LA A E I VI+DYGEERFA IA+ +V R + P+ T++
Sbjct: 130 LDMRMDPTRGESAADYLARADEREIAAVIRDYGEERFATAIARALVARRLAGRPVRTTEE 189
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
L E++ ++++ + +NPATRTFQA+RI++N EL L L + L GR+VVISFH
Sbjct: 190 LAELVAQAVKTREPGQNPATRTFQALRIFVNAELTQLEQGLAAALQCLKPGGRLVVISFH 249
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
SLEDRIVK FI ++K +DRR P F P +++ LAR KP
Sbjct: 250 SLEDRIVKTFIASHSKA-VVDRRAP-----FAPPAPMRLRALARLKP 290
>gi|359453286|ref|ZP_09242605.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20495]
gi|414070730|ref|ZP_11406711.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. Bsw20308]
gi|358049575|dbj|GAA78854.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20495]
gi|410806896|gb|EKS12881.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. Bsw20308]
Length = 312
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 184/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ ++E I+ L I + +GIY+D TFG+GGHS +IL RLG +GRL AID+D +++ K
Sbjct: 10 VLMDETIDALAI---KPDGIYMDGTFGRGGHSGQILARLGNEGRLQAIDQDPQAIQSAEK 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF+I H F++L + ++ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDPRFAIAHTRFSKLYEVAEQNDLIGKVDGILLDIGVSSPQLDDAGRGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ GEE+F K+IA +I+ R TPIT TKQL +
Sbjct: 127 MRMDPTSGRSAAQWLAEAELDDITHVIKKLGEEKFGKRIAHKILEIREHTPITTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ K L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKFKHPATRTFQAIRIYINSELEEIQTALQSAIKVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI ++ + R LP+ +
Sbjct: 247 DRIVKQFIRKQSRGEVLPRGLPLTD 271
>gi|385323538|ref|YP_005877977.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 8013]
gi|261391925|emb|CAX49387.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 8013]
Length = 328
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 175/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD RG+SA++W+A A+E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTMRGMSAAEWIAVASEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|416159689|ref|ZP_11605953.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis N1568]
gi|433472792|ref|ZP_20430161.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 97021]
gi|433481227|ref|ZP_20438496.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2006087]
gi|433483308|ref|ZP_20440544.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2002038]
gi|433485441|ref|ZP_20442646.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 97014]
gi|325128828|gb|EGC51687.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis N1568]
gi|432212231|gb|ELK68173.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 97021]
gi|432218525|gb|ELK74382.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2006087]
gi|432222678|gb|ELK78465.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 2002038]
gi|432224353|gb|ELK80119.1| S-adenosyl-methyltransferase MraW [Neisseria meningitidis 97014]
Length = 328
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 175/249 (70%), Gaps = 5/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + R +G+Y+D TFG+GGHS IL RLG GRLI DKD +++++ +
Sbjct: 12 VLLNEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLIVFDKDPQAIAVAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R ++H F L I K+DG LFDLGISS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVGVVHGGFASFQTALDGLGIGKVDGALFDLGISSPQIDDGSRGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A +E ++ +VI++YGEERF+++IA+ IV R+ +PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIAVVSEQDLHEVIKNYGEERFSRQIARAIVAQRAESPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ +++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 IVAQNVRTRERGQDPATRTFQAVRIFINRELEEVGAVLPQVMCRLKEGGRLAVIAFHSLE 248
Query: 465 DRIVKNFIN 473
DRIVK F+
Sbjct: 249 DRIVKQFVK 257
>gi|239813918|ref|YP_002942828.1| S-adenosyl-methyltransferase MraW [Variovorax paradoxus S110]
gi|263504487|sp|C5CNE6.1|RSMH_VARPS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|239800495|gb|ACS17562.1| S-adenosyl-methyltransferase MraW [Variovorax paradoxus S110]
Length = 307
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 178/279 (63%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L + G Y+DATFG+GGH+ IL RL +GRLIA DKD E+V+ +
Sbjct: 10 VLLNEAVEALLSGSTAATGTYVDATFGRGGHARAILARLAPEGRLIAFDKDAEAVAEAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I+D+RFSI H F L + + G+L DLG+SS QI+N +RGFSF DGPLDMR
Sbjct: 70 ISDARFSIRHQGFRSLG----ELPDASVAGVLMDLGVSSPQIDNPVRGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S + WLA A I +VI+DYGEERFA +IAK IV R I+ T +L E+
Sbjct: 126 MDTTRGESVADWLATAELQQIAEVIRDYGEERFAVQIAKAIVARRQERGAISTTSELAEL 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + +NPATRTFQA RI+IN EL+ L AL+ L GR+ VISFHSLED
Sbjct: 186 VAGTVKTREPGQNPATRTFQAFRIFINAELEELQQALEASLSVLQPGGRLAVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKP 504
RIVK FI ++K + DRR P + K++ L R KP
Sbjct: 246 RIVKQFIARHSKEVY-DRRAP-FAAPKAMKLRALERIKP 282
>gi|117620544|ref|YP_858331.1| S-adenosyl-methyltransferase MraW [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|263446603|sp|A0KPY0.1|RSMH_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|117561951|gb|ABK38899.1| S-adenosyl-methyltransferase MraW [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 312
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL++LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQQLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGIASYLDERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAEWLARADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L +GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALQVLAPEGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPHGIPL 268
>gi|359300334|ref|ZP_09186173.1| 16S rRNA m(4)C1402 methyltranserfase [Haemophilus [parainfluenzae]
CCUG 13788]
Length = 313
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 185/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I+ NGIYID TFG+GGHS IL +LG++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVEGLAIKE---NGIYIDGTFGRGGHSRLILSKLGEQGRLIATDRDPRAIAQANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I H F+ + + + + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IEDARFEIHHTAFSAIPEVCQSLGLMGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD T+GISA++WL + ++ V++++GEERFAK+IA IV++ + ITRT QL
Sbjct: 128 RMDTTKGISAAEWLDQVSIEDLTWVLKEFGEERFAKRIATAIVNFNRTSGQKITRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL+ L+ AL+ + L +GR+ +ISFHSL
Sbjct: 188 QIISDAVPFKDKHKHPATRSFQAIRIFINSELEELAQALQSAIEVLAPQGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK FI N+K + R LPI
Sbjct: 248 EDRMVKQFIKKNSKGKEVPRGLPI 271
>gi|307256031|ref|ZP_07537819.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306865453|gb|EFM97348.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
Length = 313
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 187/266 (70%), Gaps = 6/266 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDTRFQIVHTAFSAIPDVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y +S T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSADDLAWVLKTFGEERFAKRIAQAVVSYNKSATDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYN 489
EDR+VK F+ N+K + + LPI+
Sbjct: 248 EDRMVKQFMKKNSKGMGVPKGLPIFE 273
>gi|410692387|ref|YP_003623008.1| S-adenosyl-dependent methyl transferase MraW [Thiomonas sp. 3As]
gi|294338811|emb|CAZ87145.1| S-adenosyl-dependent methyl transferase MraW [Thiomonas sp. 3As]
Length = 317
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 186/282 (65%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I N +G+Y+DATFG+GGHS +IL RL GRLIAID+D +++ +
Sbjct: 17 VLLHEAVDQL-ITNP--DGVYLDATFGRGGHSREILRRLSPAGRLIAIDRDPQAIEAAAQ 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I H F+E +L + + + DG+LFDLG+SS Q++ RGFSF DGPLDMR
Sbjct: 74 IHDARFVIKHAPFSEFARVLHEQGVAQADGLLFDLGVSSPQLDQPERGFSFRADGPLDMR 133
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD + G + +++LA A+ I V++DYG+ER A +IAK+IV R P+ R+ +L +
Sbjct: 134 MDNSSGQTVAEYLATASVDEIATVLRDYGDERAAVQIAKKIVARRDAGAPLARSGELAAL 193
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + ++PATRTFQA+RI++N EL + AL L GR+ VISFHSLED
Sbjct: 194 VASAVKSREPGQDPATRTFQALRIHVNAELAQIETALSQVLDCLRPGGRLAVISFHSLED 253
Query: 466 RIVKNFINFNTKIPHIDRRLPI---YNYLFEPKMKFLARCKP 504
++K FI+ + + P +DRR P + F+P++K + R +P
Sbjct: 254 ALIKRFIHRHARAPAVDRRQPFVPGVSAEFQPQLKEVVRMRP 295
>gi|296134857|ref|YP_003642099.1| S-adenosyl-methyltransferase MraW [Thiomonas intermedia K12]
gi|295794979|gb|ADG29769.1| S-adenosyl-methyltransferase MraW [Thiomonas intermedia K12]
Length = 311
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 186/282 (65%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I N +G+Y+DATFG+GGHS +IL RL GRLIAID+D +++ +
Sbjct: 11 VLLHEAVDQL-ITNP--DGVYLDATFGRGGHSREILRRLSPAGRLIAIDRDPQAIEAAAQ 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RF I H F+E +L + + + DG+LFDLG+SS Q++ RGFSF DGPLDMR
Sbjct: 68 IHDARFVIKHAPFSEFARVLHEQGVAQADGLLFDLGVSSPQLDQPERGFSFRADGPLDMR 127
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD + G + +++LA A+ I V++DYG+ER A +IAK+IV R P+ R+ +L +
Sbjct: 128 MDNSSGQTVAEYLATASVDEIATVLRDYGDERAAVQIAKKIVARRDAGAPLARSGELAAL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + ++PATRTFQA+RI++N EL + AL L GR+ VISFHSLED
Sbjct: 188 VASAVKSREPGQDPATRTFQALRIHVNAELAQIETALSQVLDCLRPGGRLAVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPI---YNYLFEPKMKFLARCKP 504
++K FI+ + + P +DRR P + F+P++K + R +P
Sbjct: 248 ALIKRFIHRHARAPAVDRRQPFVPGVSAEFQPQLKEVVRMRP 289
>gi|409417630|ref|ZP_11257663.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. HYS]
Length = 315
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 188/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLAGKVSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A E I +V ++YGEERFAK++A+ +V R TP TRT L
Sbjct: 129 DMRMDPTRGVSAAEFIASAPEEEIARVFKEYGEERFAKRMARAVVLRREETPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKHFEPKIKVHGKAQFASEAELK 298
>gi|417958014|ref|ZP_12600931.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Neisseria
weaveri ATCC 51223]
gi|343967406|gb|EGV35651.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Neisseria
weaveri ATCC 51223]
Length = 321
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 178/253 (70%), Gaps = 5/253 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++N +GIY+D TFG+GGHS +L +LGK GRL+ DKD +++++
Sbjct: 9 VLLHETVDSLAVKN---DGIYVDGTFGRGGHSRLLLSKLGKNGRLVVFDKDPQAIAVAES 65
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++H+ F L + I KIDG +FDLGISS QI++ RGFSF D PLD
Sbjct: 66 LAAEDERVSVVHDGFVNFQTALGELGIDKIDGAMFDLGISSPQIDDGRRGFSFRFDAPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++WLA+ATE I +VI++YGEERF+++IA+ IV R PI T++L E
Sbjct: 126 MRMDTTRGVSAAEWLASATEQEIHEVIKNYGEERFSRQIARAIVVQREEAPIDTTRKLAE 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ K++R + ++PATRTFQAIRI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 186 LVAKNVRTRECGQDPATRTFQAIRIFINRELEEVEGVLPQVVGRLKSGGRLAVIAFHSLE 245
Query: 465 DRIVKNFINFNTK 477
DRIVK F+ +++
Sbjct: 246 DRIVKQFMKKHSQ 258
>gi|336123364|ref|YP_004565412.1| MraW [Vibrio anguillarum 775]
gi|365538546|ref|ZP_09363721.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio ordalii ATCC 33509]
gi|335341087|gb|AEH32370.1| MraW [Vibrio anguillarum 775]
Length = 316
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 183/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGDNGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFTIIHGPFSGMAQYAERYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLAQADLDDITWVIREFGEDKHARRIAKAIVAYREDDEKEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR+FQA RIYIN EL+ + ALK K L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAAKILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + LP+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGLPL 272
>gi|121611471|ref|YP_999278.1| S-adenosyl-methyltransferase MraW [Verminephrobacter eiseniae
EF01-2]
gi|263504490|sp|A1WRK3.1|RSMH_VEREI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|121556111|gb|ABM60260.1| S-adenosyl-methyltransferase MraW [Verminephrobacter eiseniae
EF01-2]
Length = 334
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 129/261 (49%), Positives = 175/261 (67%), Gaps = 7/261 (2%)
Query: 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI 304
G ++DATFG+GGH+ IL RLG +GRL+A DKD E+++ +ITD+RFSI H F +L
Sbjct: 29 GTWVDATFGRGGHTRLILCRLGPQGRLVAFDKDPEAIAEAMRITDARFSIRHQGFGQL-- 86
Query: 305 ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATE 364
+ + G+L DLG+SS QI++ RGFSF DGPLDMRMD TRG+SA+ WLA A
Sbjct: 87 --GQLPAGSLAGVLMDLGVSSPQIDSPERGFSFRFDGPLDMRMDTTRGLSAADWLATADA 144
Query: 365 FNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEIILKSIRGNKRYKNPATRT 423
I +V++DYGEERFA IAK IV R P+ RT +L +++ +++ + +NPATRT
Sbjct: 145 GQIAQVLRDYGEERFAGLIAKAIVARRQARGPLARTAELADLVAGAVKTREPGQNPATRT 204
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDR 483
FQA+RI+IN EL+ L AL L GR+VV+SFHSLEDRIVK FI +++ P DR
Sbjct: 205 FQALRIFINAELEELQQALAASLLVLQPGGRLVVLSFHSLEDRIVKQFIARHSRQP-FDR 263
Query: 484 RLPIYNYLFEPKMKFLARCKP 504
R+P + ++ LAR +P
Sbjct: 264 RVP-FAAPQAMQLLALARVRP 283
>gi|330826599|ref|YP_004389902.1| ribosomal RNA small subunit methyltransferase H [Alicycliphilus
denitrificans K601]
gi|329311971|gb|AEB86386.1| Ribosomal RNA small subunit methyltransferase H [Alicycliphilus
denitrificans K601]
Length = 308
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 177/279 (63%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ +EA++ L G ++D TFG+GGH+ IL+RLG +GRL+A DKD E++ +
Sbjct: 10 VLASEAVDALLGGAAAPVGTFVDGTFGRGGHARLILQRLGAQGRLVAFDKDPEAIHEAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F+ L + + G+L DLGISS QI++ RGFSF DGPLDMR
Sbjct: 70 IHDARFSIQHQGFSHL----GELPAASVAGVLLDLGISSPQIDDPARGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD TRG S ++WLA A I +VI+DYGEERFA IAK IV R+ PI T +L +I
Sbjct: 126 MDTTRGQSVAEWLAGAEAAQIAEVIRDYGEERFAGPIAKAIVARRTQGGPIVGTAELADI 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + +NPATRTFQA RI+IN EL+ L AL+ L GR+VVISFHSLED
Sbjct: 186 VAGAVKTREPGQNPATRTFQAFRIFINAELEELQQALEASLTVLAPGGRLVVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKP 504
RIVK FI ++K DRR P + ++K L R KP
Sbjct: 246 RIVKQFIARHSK-EMFDRRAP-FAAPTPMRLKALGRVKP 282
>gi|340785724|ref|YP_004751189.1| hypothetical protein CFU_0530 [Collimonas fungivorans Ter331]
gi|340550991|gb|AEK60366.1| hypothetical protein CFU_0530 [Collimonas fungivorans Ter331]
Length = 279
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 167/228 (73%), Gaps = 11/228 (4%)
Query: 497 KFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILV 556
K+LA + LNI ++ DYCPNGLQVEGR+ I +VTGVTASL L++ A D ADAILV
Sbjct: 37 KYLA-----EALNITQFRDYCPNGLQVEGRAEIRRLVTGVTASLALLEAAADSGADAILV 91
Query: 557 HHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTR 616
HHGYFW+GE++ +VG K KRL+ L+ + INL+AYHLPLD HP+ GNN QLA+ L +
Sbjct: 92 HHGYFWRGEDARVVGPKHKRLKLLLAHDINLFAYHLPLDAHPEFGNNVQLAQQLGLAPHG 151
Query: 617 RFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTG 676
RF +++GW+G ++ ++ T+ DL + I R++ + P++IGD ++ + +I WCTG
Sbjct: 152 RFGDDSLGWLGSAVD------PQVSTVGDLANVIERRLQRAPVLIGDPSQPLGQIAWCTG 205
Query: 677 AAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AAQ+LL DAI G YISGEISE TV+++RE+GVAY AAGHHATERY
Sbjct: 206 AAQSLLGDAIAAGAGVYISGEISEPTVHLARETGVAYLAAGHHATERY 253
>gi|392985984|ref|YP_006484571.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa DK2]
gi|418583941|ref|ZP_13148007.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589685|ref|ZP_13153606.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
MPAO1/P2]
gi|419751965|ref|ZP_14278374.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
PADK2_CF510]
gi|421518973|ref|ZP_15965646.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
PAO579]
gi|375046420|gb|EHS38981.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051541|gb|EHS44008.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
MPAO1/P2]
gi|384401542|gb|EIE47896.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392321489|gb|AFM66869.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa DK2]
gi|404346378|gb|EJZ72728.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
PAO579]
Length = 315
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 186/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 12 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANATE I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 129 DMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 189 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 249 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 290
>gi|392546800|ref|ZP_10293937.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas rubra ATCC
29570]
Length = 311
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 184/265 (69%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ + E ++ LNI+ +G YID TFG+GGHS +IL+RL ++G+L AID+D ++++ K
Sbjct: 10 VLMAETLDALNIQP---DGTYIDGTFGRGGHSGEILKRLNEQGKLQAIDQDPQAIAAAQK 66
Query: 287 ITDS-RFSIIHNCFTELD-IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSI HN F+ ++ + L + ++DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDPRFSIAHNRFSHIESVALDAGLLGQVDGILLDIGVSSPQLDDAERGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T G SA++WLA A ++ VI+ YGEE+FA++IA +I+ R T IT TKQL E
Sbjct: 127 MRMNPTAGRSAAQWLAEAELEDMVFVIKKYGEEKFARRIATKIIETREHTEITSTKQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I +++ ++K+PATRTFQAIRIYIN EL+ + AL+ L GR+VVISFHSLE
Sbjct: 187 LIDEAVPVKDKHKHPATRTFQAIRIYINSELEEIQTALQAALAVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K + R LP+ +
Sbjct: 247 DRIVKQFIKKQSKGEAVPRGLPLTD 271
>gi|407793144|ref|ZP_11140179.1| 16S rRNA m(4)C1402 methyltransferase [Idiomarina xiamenensis
10-D-4]
gi|407215504|gb|EKE85343.1| 16S rRNA m(4)C1402 methyltransferase [Idiomarina xiamenensis
10-D-4]
Length = 316
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 179/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +G Y+DATFG+GGHS +LE+LGK GRLIA+D+D ++++
Sbjct: 11 VLLSEAVAALAI---KPDGCYLDATFGRGGHSRAVLEQLGKDGRLIALDRDPQAIAAAQA 67
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RF+I H F EL ++ + + + DGILFDLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 68 FSHDPRFAIFHRPFGELAKVIDEQQLAGQFDGILFDLGVSSPQLDDAERGFSFMRDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G +A+ WL A I +V++ YGEERFA +IA+ IVH R P TRTKQL +
Sbjct: 128 MRMDTSSGETAADWLNRAEADTIARVLKVYGEERFAGRIARAIVHDRQQQPFTRTKQLAD 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + ++K+PATR+FQAIRI++N+EL+ + AL L GR+VVISFHSLE
Sbjct: 188 LIARVSPIRDKHKHPATRSFQAIRIHVNRELEQIEDALAASLTALKHDGRLVVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK F+ ++ I LP+ +
Sbjct: 248 DRIVKRFMRQASQPKPIPAGLPVTD 272
>gi|392307107|ref|ZP_10269641.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas citrea
NCIMB 1889]
Length = 311
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 182/265 (68%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ + E ++ L+I+ NG YID TFG+GGHS +IL RL ++GRL AID+D ++++ K
Sbjct: 10 VLMQETLDALDIDP---NGTYIDGTFGRGGHSGQILARLSEQGRLQAIDQDPQAIAAAEK 66
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D+RF+I H F+ + + + ++ K+DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FANDNRFAIAHTRFSNIHTVAQDADLLGKVDGILLDIGVSSPQLDDADRGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I VI+ YGEE+F ++IA +I+ R TPI TKQL +
Sbjct: 127 MRMDPTSGRSAAQWLAEAELEDITFVIKKYGEEKFGRRIAHKILETRDETPILTTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL+ + AL+ L GR+VVISFHSLE
Sbjct: 187 LVDEAVPVKDKHKHPATRTFQAIRIYINSELEEIQTALQASLDVLKPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K + R LP+ +
Sbjct: 247 DRIVKQFIKKQSKGEALPRGLPLTD 271
>gi|15599616|ref|NP_253110.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa PAO1]
gi|107099995|ref|ZP_01363913.1| hypothetical protein PaerPA_01001016 [Pseudomonas aeruginosa PACS2]
gi|254244769|ref|ZP_04938091.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296391129|ref|ZP_06880604.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa PAb1]
gi|416876461|ref|ZP_11919266.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas aeruginosa
152504]
gi|420141561|ref|ZP_14649236.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa CIG1]
gi|421162765|ref|ZP_15621572.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa ATCC
25324]
gi|421182478|ref|ZP_15639954.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa E2]
gi|424944815|ref|ZP_18360578.1| putative methyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|20139184|sp|Q9HVZ5.1|RSMH_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|9950652|gb|AAG07808.1|AE004856_19 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126198147|gb|EAZ62210.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|334840739|gb|EGM19385.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas aeruginosa
152504]
gi|346061261|dbj|GAA21144.1| putative methyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403245703|gb|EJY59484.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa CIG1]
gi|404533371|gb|EKA43201.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa ATCC
25324]
gi|404542065|gb|EKA51404.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa E2]
Length = 313
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 186/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANATE I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|49084936|gb|AAT51240.1| PA4420, partial [synthetic construct]
Length = 314
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 186/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANATE I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|261401195|ref|ZP_05987320.1| S-adenosyl-methyltransferase MraW [Neisseria lactamica ATCC 23970]
gi|269208876|gb|EEZ75331.1| S-adenosyl-methyltransferase MraW [Neisseria lactamica ATCC 23970]
Length = 319
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 184/278 (66%), Gaps = 7/278 (2%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--T 288
EA++ L + R +G+Y+D TFG+GGHS IL RLG GRL+ DKD +V+ ++ +
Sbjct: 16 EAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLVVFDKDPRAVAAAEELARS 72
Query: 289 DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMD 348
D R S++H F L I +DG LFDLG+SS QI++ RGFSF D PLDMRMD
Sbjct: 73 DKRVSVVHGGFASFQTALDDLGIGDVDGALFDLGVSSPQIDDAARGFSFRFDAPLDMRMD 132
Query: 349 ITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILK 408
TRG+SA++W+A+A+E ++ +VI++YGEERF+++IA+ IV R+ PI T++L ++ +
Sbjct: 133 TTRGMSAAEWIASASEQDLHEVIKNYGEERFSRQIARAIVAQRAENPIDTTRKLAQLAAQ 192
Query: 409 SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIV 468
++R +R ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLEDRIV
Sbjct: 193 NVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVMCRLKQGGRLAVIAFHSLEDRIV 252
Query: 469 KNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
K F+ ++ + R + L EP +K + + KP
Sbjct: 253 KQFVGKYSRHAPLPRWAAVREADLPEPPLKIVGKALKP 290
>gi|402306600|ref|ZP_10825641.1| S-adenosyl-methyltransferase MraW [Haemophilus sputorum HK 2154]
gi|400374555|gb|EJP27472.1| S-adenosyl-methyltransferase MraW [Haemophilus sputorum HK 2154]
Length = 313
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 185/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I+ NGIYID TFG+GGHS IL +LG++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVEGLAIKE---NGIYIDGTFGRGGHSRLILSKLGEQGRLIATDRDPRAIAQANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I H F+ + + + + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IEDARFEIHHTAFSAIPEVCQSLGLMGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD T+G+SA++WL + ++ V++++GEERFAK+IA IV++ + ITRT QL
Sbjct: 128 RMDTTKGLSAAEWLDQVSIEDLTWVLKEFGEERFAKRIATAIVNFNRTSGQKITRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL+ L+ AL+ + L +GR+ +ISFHSL
Sbjct: 188 QIISDAVPFKDKHKHPATRSFQAIRIFINSELEELAQALQSAIEVLAPQGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK FI N+K + R LPI
Sbjct: 248 EDRMVKQFIKKNSKGKEVPRGLPI 271
>gi|319764380|ref|YP_004128317.1| s-adenosyl-methyltransferase mraw [Alicycliphilus denitrificans BC]
gi|317118941|gb|ADV01430.1| S-adenosyl-methyltransferase MraW [Alicycliphilus denitrificans BC]
Length = 308
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 177/279 (63%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ +EA++ L G ++D TFG+GGH+ IL+RLG +GRL+A DKD E++ +
Sbjct: 10 VLASEAVDALLGGAAAPVGTFVDGTFGRGGHARLILQRLGAQGRLVAFDKDPEAIHEAAR 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F+ L + + G+L DLGISS QI++ RGFSF DGPLDMR
Sbjct: 70 IHDARFSIRHQGFSHL----GELPAASVAGVLLDLGISSPQIDDPARGFSFRFDGPLDMR 125
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD TRG S ++WLA A I +VI+DYGEERFA IAK IV R+ PI T +L +I
Sbjct: 126 MDTTRGQSVAEWLAGAEAAQIAEVIRDYGEERFAGPIAKAIVARRTQGGPIVGTAELADI 185
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + +NPATRTFQA RI+IN EL+ L AL+ L GR+VVISFHSLED
Sbjct: 186 VAGAVKTREPGQNPATRTFQAFRIFINAELEELQQALEASLTVLAPGGRLVVISFHSLED 245
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKP 504
RIVK FI ++K DRR P + ++K L R KP
Sbjct: 246 RIVKQFIARHSK-EMFDRRAP-FAAPTPMRLKALGRVKP 282
>gi|355650320|ref|ZP_09056020.1| ribosomal RNA small subunit methyltransferase H [Pseudomonas sp.
2_1_26]
gi|421170169|ref|ZP_15628143.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa ATCC
700888]
gi|354826869|gb|EHF11072.1| ribosomal RNA small subunit methyltransferase H [Pseudomonas sp.
2_1_26]
gi|404524242|gb|EKA34593.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa ATCC
700888]
Length = 313
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 186/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGTGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANATE I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|303250489|ref|ZP_07336686.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251832|ref|ZP_07338003.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307249133|ref|ZP_07531140.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|307249209|ref|ZP_07531206.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|307251531|ref|ZP_07533438.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307260461|ref|ZP_07542156.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|302649262|gb|EFL79447.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650477|gb|EFL80636.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854421|gb|EFM86617.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|306858733|gb|EFM90792.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306860995|gb|EFM93001.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306869864|gb|EFN01646.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 313
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 186/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDTRFQIVHTAFSAIPDVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y +S T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSADDLAWVLKTFGEERFAKRIAQAVVSYNKSATDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMDVPKGLPI 271
>gi|85058419|ref|YP_454121.1| S-adenosyl-methyltransferase MraW [Sodalis glossinidius str.
'morsitans']
gi|123520087|sp|Q2NVV9.1|RSMH_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|84778939|dbj|BAE73716.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 315
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 181/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R + +Y+D TFG+GGHS IL +LG +GRL AID+D ++
Sbjct: 10 VLLDEAVKGLNL---RPDSVYLDGTFGRGGHSRLILSKLGAQGRLFAIDRDPAAIEAARA 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF+IIH F+ + + + ++ + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IEDARFAIIHGPFSAMAEYMAQRDLLGKVDGILLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WLA A+ +I V++ +GEERFAK+IA+ IV + P+TRT++L +
Sbjct: 127 RMDTTRGQSAAQWLAQASAEDIAWVLKTFGEERFAKRIAQAIVAHNRQQPMTRTRELAAL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+PATR+FQAIRIYIN EL+ + AL L GR+ VISFHSLED
Sbjct: 187 IADASPFRDKHKHPATRSFQAIRIYINSELEEIERALDGALTVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK FI +++ P + LP+
Sbjct: 247 RLVKQFIRQHSRGPQVPAGLPL 268
>gi|374334686|ref|YP_005091373.1| 16S rRNA m(4)C1402 methyltransferase [Oceanimonas sp. GK1]
gi|372984373|gb|AEY00623.1| 16S rRNA m(4)C1402 methyltransferase [Oceanimonas sp. GK1]
Length = 314
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 174/262 (66%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ LNI R +GIY+D TFG+GGHS IL +LG GRL+AID+D ++++ +
Sbjct: 10 VLLEEAVAGLNI---RPDGIYVDGTFGRGGHSRHILSKLGPNGRLLAIDRDPAAIAVAEQ 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I+H F+ L +++ + K+DG+L DLG+SS Q++ RGFSF DGPLDM
Sbjct: 67 IHDSRFQILHGPFSGLAAMMEAEGLTGKVDGVLLDLGVSSPQLDEAERGFSFQKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD G SA+ WL +A +I V++ +GEER A+KIA+ IVH R TP +RT+QL E+
Sbjct: 127 RMDPGSGQSAADWLNHADMDDIAWVLKTFGEERHARKIARAIVHDRQTTPWSRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL L GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKNKHAATRSFQAIRIYINSELDEIEQALNGALTVLAPGGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI K P + LP+
Sbjct: 247 RLVKHFIRKQEKGPEVPPGLPL 268
>gi|421747751|ref|ZP_16185429.1| 16S rRNA m(4)C1402 methyltransferase, partial [Cupriavidus necator
HPC(L)]
gi|409773589|gb|EKN55356.1| 16S rRNA m(4)C1402 methyltransferase, partial [Cupriavidus necator
HPC(L)]
Length = 284
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 179/271 (66%), Gaps = 18/271 (6%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L R +G+Y+D TFG+GGHS +L RLG +G L+A DKD +++
Sbjct: 17 VLLDEAVDALVW---RPDGVYVDGTFGRGGHSRAVLARLGPEGALVAFDKDPAAIAEAGT 73
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D+RFSI H F + ++ K+ G+L DLGISS QI++ RGFSF +GPLDMR
Sbjct: 74 IKDARFSIEHASFAAMG---ERLAGAKVAGVLLDLGISSPQIDDAARGFSFRFEGPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP-----ITRTKQ 401
MD TRGI+A++WLA A E +I +VI+DYGEERFA +IAK IV RS P + T
Sbjct: 131 MDTTRGITAAEWLAQADEQDIARVIRDYGEERFAVQIAKAIVARRS-EPGDGGRLATTAD 189
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
L ++ K+++ ++ ++PATRTFQA+RI+INQEL +L L + L + GR+VVISFH
Sbjct: 190 LAALVAKAVKTREKGQDPATRTFQALRIFINQELADLESGLSAAYDLLEVGGRLVVISFH 249
Query: 462 SLEDRIVKNFINFNTKIPHID-----RRLPI 487
SLEDRIVK F+ + + P D RR P+
Sbjct: 250 SLEDRIVKRFMQAHAR-PQQDADPALRRAPL 279
>gi|418292509|ref|ZP_12904447.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379063930|gb|EHY76673.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 315
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 186/291 (63%), Gaps = 10/291 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +G Y+D TFG+GGHS +L++LG G+L+ DKD +++ G
Sbjct: 12 VLLDEAVAALNV---RADGRYLDGTFGRGGHSRLLLQQLGSDGQLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL--DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+ D RF ++ F EL ++ + +N + GIL DLG+SS Q+++ RGFSFL DGP
Sbjct: 69 LAAEDGRFVVVQRSFAELGEELAQRGWN-GTVSGILLDLGVSSPQLDDPARGFSFLHDGP 127
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL 402
LDMRMD +RG+SA++W+A+A E I +V ++YGEERFAK++A+ +V R P RT L
Sbjct: 128 LDMRMDPSRGVSAAEWIAHAEEEEIARVFKEYGEERFAKRMARAVVQRRVEAPFERTADL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+++ ++ ++ KNPATR FQ +RIYIN EL +L L+ L + GR+VVISFHS
Sbjct: 188 AKVLTEANPAWEKGKNPATRAFQGLRIYINNELGDLERGLEAALDALEVGGRLVVISFHS 247
Query: 463 LEDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
LEDRIVK F+ + K + R LPI FEP++K + + +K
Sbjct: 248 LEDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLFGKPQYASDAEVK 298
>gi|262273821|ref|ZP_06051634.1| S-adenosyl-methyltransferase MraW [Grimontia hollisae CIP 101886]
gi|262222236|gb|EEY73548.1| S-adenosyl-methyltransferase MraW [Grimontia hollisae CIP 101886]
Length = 317
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 188/283 (66%), Gaps = 11/283 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L + + +GIY+D TFG+GGH+ +IL RLG+ GRL +ID+D +++ K
Sbjct: 10 VLLHESIDGLAL---KPDGIYVDGTFGRGGHTREILRRLGENGRLYSIDRDPQAIEEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFNIIHGPFSGIQQYMEARGLSGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI AS+WLA A +I V++++GEERFAK+IA+ IV +R + P+TRT QL
Sbjct: 127 RMDPTSGIPASQWLAEADADDIAWVLKEFGEERFAKRIARAIVAHREDETKEPLTRTLQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I R K+PATR FQAIRIYIN EL+ + A++ + L GR+ +ISFHS
Sbjct: 187 ANLIASVSPSRDRKKHPATRCFQAIRIYINSELEEIETAMQGALEVLAPGGRLSIISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
LEDR+VK FI +K P + +P L E +++ L + K K
Sbjct: 247 LEDRLVKRFIRKQSKGPDVPHGVP----LTEEQIRALGQAKMK 285
>gi|421155784|ref|ZP_15615250.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa ATCC
14886]
gi|404519961|gb|EKA30670.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa ATCC
14886]
Length = 313
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREGGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANATE I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|418532757|ref|ZP_13098654.1| 16S rRNA m(4)C1402 methyltransferase [Comamonas testosteroni ATCC
11996]
gi|371450083|gb|EHN63138.1| 16S rRNA m(4)C1402 methyltransferase [Comamonas testosteroni ATCC
11996]
Length = 309
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 184/284 (64%), Gaps = 16/284 (5%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L+EA++ L E G ++DATFG+GGHS IL+RLG GRLIA DKD ++++
Sbjct: 10 VLLDEAVDALLGGAAEPPAGQWVDATFGRGGHSRLILQRLGPDGRLIAFDKDPDAIAEAA 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L + + + G+L DLG+SS QI+N RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHLGELPEG----SVQGVLMDLGVSSPQIDNPDRGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQLVE 404
RMD TRG S ++WL +A I +VI+DYGEERFA IAK IV R S P+ T +L +
Sbjct: 126 RMDTTRGQSVAEWLEDAEVQQIAEVIRDYGEERFAGPIAKAIVARRESQGPLRTTAELAQ 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ + L GR+ VISFHSLE
Sbjct: 186 LVAGAVKTREAGQNPATRTFQALRIFINAELQELEQALEASLRVLAPGGRLAVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
DRIVK FI ++K + DRR P F P ++K L R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP-----FAPPTPMRLKALERIKP 283
>gi|149927124|ref|ZP_01915381.1| S-adenosyl-methyltransferase [Limnobacter sp. MED105]
gi|149824063|gb|EDM83284.1| S-adenosyl-methyltransferase [Limnobacter sp. MED105]
Length = 323
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 176/268 (65%), Gaps = 6/268 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
+G+Y+D TFG+GGHS +LE+L +G+L+A+D+D ++V +I DSRF + + F +L+
Sbjct: 23 DGLYLDCTFGRGGHSRALLEKLSAQGQLVALDRDPQAVQAMGEIKDSRFRGVRSAFADLE 82
Query: 304 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
L I ++DG+L D+G+SS QI+ RGFSF DGPLDMRMD G SA+ +LA A
Sbjct: 83 SALDSLGIDQVDGVLMDIGVSSPQIDQAERGFSFRRDGPLDMRMDPQTGESAADFLARAD 142
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRT 423
IK+VI++YGEERFA +IA IV R+ PIT T L +I+ ++R + ++PATRT
Sbjct: 143 AREIKEVIKNYGEERFAVQIATAIVARRTERPITTTLDLAQIVAGAVRTREPGQDPATRT 202
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFI----NFNTKIP 479
FQA+RI++NQEL L L FK+L + GR+ VISFHSLEDRI K FI N ++
Sbjct: 203 FQALRIHVNQELAQLEQGLTAAFKRLRVGGRLAVISFHSLEDRITKQFIEKLANPKSQQD 262
Query: 480 HIDRRLPIYNYLFEPKMKFLARCKPKKK 507
R+LP+ P MK L R KP K+
Sbjct: 263 ARLRKLPLPEPT--PLMKKLDRIKPTKE 288
>gi|152996635|ref|YP_001341470.1| S-adenosyl-methyltransferase MraW [Marinomonas sp. MWYL1]
gi|263456400|sp|A6VYK6.1|RSMH_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|150837559|gb|ABR71535.1| S-adenosyl-methyltransferase MraW [Marinomonas sp. MWYL1]
Length = 312
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 187/284 (65%), Gaps = 8/284 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN- 285
+ LNE+++ L + NG+Y+D TFG+GGH+ +L+RL KGRL+ DKD ++ G
Sbjct: 11 VMLNESVDMLVTDT---NGLYVDGTFGRGGHTRLVLDRL-DKGRLLGFDKDPVAIGHGKL 66
Query: 286 -KITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D+RFSI+ + F + + I + + ++DG++ DLG+SS QI++ RGFSF+ DGPL
Sbjct: 67 LEQEDARFSIVQDSFANMAEHITNVFGVDRVDGVMMDLGVSSPQIDDAERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +G SA++W+A +E ++ V+ YGEERF+++IAK I YRS TPI T QL
Sbjct: 127 DMRMNPDKGQSAAEWIATVSEKDMADVMYQYGEERFSRRIAKAICEYRSHTPILTTLQLS 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++ KNPATR FQ IRIYIN EL +L I L+ + L + GR+ VISFHSL
Sbjct: 187 KIIAEANPAWEKGKNPATRAFQGIRIYINNELGDLEIGLEAAAQALKVGGRLAVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC-KPKK 506
EDRIVK F+ K P + R LPI N + K K + + KP +
Sbjct: 247 EDRIVKRFMKLQAKGPELPRHLPIRNAHLDIKFKTVGKAIKPSQ 290
>gi|221065130|ref|ZP_03541235.1| S-adenosyl-methyltransferase MraW [Comamonas testosteroni KF-1]
gi|220710153|gb|EED65521.1| S-adenosyl-methyltransferase MraW [Comamonas testosteroni KF-1]
Length = 309
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 183/284 (64%), Gaps = 16/284 (5%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L+EA++ L E G ++DATFG+GGHS IL RLG GRLIA DKD ++++
Sbjct: 10 VLLDEAVDALLGGAAEPPAGQWVDATFGRGGHSRLILRRLGPDGRLIAFDKDPDAIAEAA 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L + + + G+L DLG+SS QI+N RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHLSELPEG----SVQGVLMDLGVSSPQIDNPDRGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQLVE 404
RMD TRG S ++WL +A I +VI+DYGEERFA IAK IV R S P+ T +L +
Sbjct: 126 RMDTTRGQSVAEWLEDAEVQQIAEVIRDYGEERFAGPIAKAIVARRESQGPLRTTAELAQ 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ + L GR+ VISFHSLE
Sbjct: 186 LVAGAVKTREAGQNPATRTFQALRIFINAELQELEQALEASLRVLAPGGRLAVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
DRIVK FI ++K + DRR P F P ++K L R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP-----FAPPTPMRLKALERIKP 283
>gi|237807292|ref|YP_002891732.1| S-adenosyl-methyltransferase MraW [Tolumonas auensis DSM 9187]
gi|262825943|sp|C4LA17.1|RSMH_TOLAT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|237499553|gb|ACQ92146.1| S-adenosyl-methyltransferase MraW [Tolumonas auensis DSM 9187]
Length = 308
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L I R +GIY+D TFG+GGHS IL++LG +GRL AID+D ++V++ +
Sbjct: 6 VLLQEAVDGLAI---RPDGIYVDGTFGRGGHSRLILQQLGPQGRLYAIDRDPQAVAVAKE 62
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
D RF II F+ L + + ++ + K+DG+L DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 63 WQDPRFEIISGPFSSLHEYMAERGLLGKVDGLLLDLGVSSPQLDEAERGFSFMNDGPLDM 122
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD G SA++WL +A +I V++ YGEERFA +IA+ IV R TP TRT+QL E+
Sbjct: 123 RMDPLHGESAAEWLLHADVDDIAWVLRTYGEERFANRIARAIVADRVTTPYTRTRQLAEM 182
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + + +++K+PATR+FQA+RI++NQELK + LK L GR+ VISFHSLED
Sbjct: 183 IARVVPNKEKHKHPATRSFQALRIHVNQELKEIEETLKASLSVLAPGGRLAVISFHSLED 242
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI K R LPI
Sbjct: 243 RIVKQFIRQQEKGIQPPRGLPI 264
>gi|453046242|gb|EME93959.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
PA21_ST175]
Length = 315
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 12 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ +IDG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGDEVRARGLEGRIDGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANA E I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 129 DMRMNPGQGISAAEFIANAAEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 189 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 249 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 290
>gi|313667806|ref|YP_004048090.1| s-adenosyl-l-methionine-dependent methyltransferase MraW [Neisseria
lactamica 020-06]
gi|313005268|emb|CBN86701.1| s-adenosyl-l-methionine-dependent methyltransferase MraW (ec
2.1.1.-) [Neisseria lactamica 020-06]
Length = 319
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 186/282 (65%), Gaps = 7/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + R +G+Y+D TFG+GGHS IL RLG GRL+ DKD +V+ +
Sbjct: 12 VLLHEAVDALAV---REDGVYVDGTFGRGGHSRLILSRLGDAGRLVVFDKDPRAVAAAEE 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D R S++H F L I +DG LFDLG+SS QI++ RGFSF D PLD
Sbjct: 69 LARSDKRVSVVHGGFASFQTALDDLGIGDVDGALFDLGVSSPQIDDAARGFSFRFDAPLD 128
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++W+A+A+E ++ +VI++YGEERF+++IA+ IV R+ PI T++L +
Sbjct: 129 MRMDTTRGMSAAEWIASASEQDLHEVIKNYGEERFSRQIARAIVAQRAENPIDTTRKLAQ 188
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+ +++R + ++PATRTFQA+RI+IN+EL+ + L +L GR+ VI+FHSLE
Sbjct: 189 LAAQNVRTRECGQDPATRTFQAVRIFINRELEEVEAVLPQVMCRLKQGGRLAVIAFHSLE 248
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KP 504
DRIVK F+ ++ + R + L EP +K + + KP
Sbjct: 249 DRIVKQFVGKYSRHAPLPRWAAVREADLPEPPLKIVGKALKP 290
>gi|53729126|ref|ZP_00134091.2| COG0275: Predicted S-adenosylmethionine-dependent methyltransferase
involved in cell envelope biogenesis [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207498|ref|YP_001052723.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|263440608|sp|A3MY82.1|RSMH_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|126096290|gb|ABN73118.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 313
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 186/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 INDARFQIVHTAFSAIPEVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y +S T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSVDDLAWVLKTFGEERFAKRIAQAVVSYNKSATDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMGVPKGLPI 271
>gi|429331483|ref|ZP_19212237.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida CSV86]
gi|428763815|gb|EKX85976.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida CSV86]
Length = 315
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 184/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L++ R +G Y+D TFG+GGHS IL++LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALSV---RADGCYLDGTFGRGGHSRLILQKLGPDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+LFDLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGSEVAERGLAGKVSGVLFDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++++A A E I +V ++YGEERFAK++A+ +V R P TRT L
Sbjct: 129 DMRMDPSRGVSAAEFIATAPEEEIARVFKEYGEERFAKRMARAVVLRREEQPFTRTSDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLDAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LP+ + FEPK+K + + +
Sbjct: 249 EDRIVKLFMRKLAKGEQDNLPRNLPVQHKPFEPKIKLIGKAQ 290
>gi|410642373|ref|ZP_11352885.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
chathamensis S18K6]
gi|410644644|ref|ZP_11355120.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
agarilytica NO2]
gi|410135818|dbj|GAC03519.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
agarilytica NO2]
gi|410138045|dbj|GAC11072.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
chathamensis S18K6]
Length = 311
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ L+I + +G+Y+DATFG+GGHS +IL +L KGRLIA+D+D ++
Sbjct: 10 VLLQESLDGLSI---KPDGVYLDATFGRGGHSKQILTQLSDKGRLIALDRDPSAIESAKA 66
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFSI H F+E++ +L + K+DGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 LANDPRFSIHHCNFSEMEDVLTSLELHGKVDGILMDLGVSSPQLDEPERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T+G SA++WLA+A E +I +VI+++GEE+F K+IA IV+ R PIT T QL E
Sbjct: 127 MRMNPTKGQSAAQWLAHAEEQDIAQVIKEFGEEKFGKRIAHGIVNARQQAPITTTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ ++K+PATR+FQ IRIYIN EL + LK LN GR+ VISFHSLE
Sbjct: 187 IIDIAVPVKDKFKHPATRSFQGIRIYINSELDEIRTGLKSALNSLNSGGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DR+VK FI ++ + LPI
Sbjct: 247 DRLVKRFIREQSRGLQVPHGLPIMQ 271
>gi|398803215|ref|ZP_10562321.1| S-adenosyl-methyltransferase MraW [Polaromonas sp. CF318]
gi|398097094|gb|EJL87406.1| S-adenosyl-methyltransferase MraW [Polaromonas sp. CF318]
Length = 305
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 184/285 (64%), Gaps = 16/285 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI L + +G Y+DATFG+GGHS +L +L +GRL A DKD ++++
Sbjct: 10 VLLNEAIAALLVNP---DGHYVDATFGRGGHSRLLLSQLSPQGRLTAFDKDLDAIAEAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RFSI H F +L + DG+L DLG+SS QI+N +RGFSF +GPLDMR
Sbjct: 67 ITDPRFSIRHEGFMQL----GQLPAASADGVLMDLGVSSPQIDNPVRGFSFRQEGPLDMR 122
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S ++WLA+A+ + +VI++YGEERFA++IAK I R P+ T +L E+
Sbjct: 123 MDTTRGQSVAEWLADASIETMAEVIREYGEERFAQQIAKAIDRRRQERGPLRTTAELAEV 182
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + K+PATRTFQA+RI+IN EL+ L AL K L GR+VVISFHSLED
Sbjct: 183 VAGAVKTREPGKDPATRTFQALRIFINAELEELQQALAASLKVLRPGGRLVVISFHSLED 242
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPK---MKFLARCKPKKK 507
RIVK FI +++ DRR P EPK +K L R KP ++
Sbjct: 243 RIVKQFIAAHSR-EVFDRRAPFA----EPKAMQLKALGRTKPSEQ 282
>gi|425062816|ref|ZP_18465941.1| rRNA small subunit methyltransferase H [Pasteurella multocida
subsp. gallicida X73]
gi|404383522|gb|EJZ79973.1| rRNA small subunit methyltransferase H [Pasteurella multocida
subsp. gallicida X73]
Length = 321
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILSRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHRSFSDIPRICERLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA+ IV+Y P++RT
Sbjct: 132 RMDTTQGLSASEWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTEPLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANAVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|218893511|ref|YP_002442380.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa LESB58]
gi|386060572|ref|YP_005977094.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa M18]
gi|416859392|ref|ZP_11913823.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas aeruginosa
138244]
gi|262825031|sp|B7UZJ8.1|RSMH_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|218773739|emb|CAW29553.1| putative methyltransferase [Pseudomonas aeruginosa LESB58]
gi|334838461|gb|EGM17180.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas aeruginosa
138244]
gi|347306878|gb|AEO76992.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa M18]
Length = 313
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ +IDG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRIDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANA E I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANAAEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|452749602|ref|ZP_21949362.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri NF13]
gi|452006534|gb|EMD98806.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri NF13]
Length = 315
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN+ R +G Y+D TFG+GGHS +L++LG G L+ DKD +++ G
Sbjct: 12 VLLDEAVAALNV---RPDGRYLDGTFGRGGHSRLLLQQLGPDGLLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + ++ I G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGEEVAQRGWSGTISGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD RG+SA+ W+A+A E I +V +DYGEERFAK++A+ +V R P RT L
Sbjct: 129 DMRMDPNRGVSAAAWIAHADEGEIARVFKDYGEERFAKRMARAVVQRREEAPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ +RIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTEANPAWEKGKNPATRAFQGLRIYINNELGDLEQGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K + R LPI FEP++K L + +
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLLGKPQ 290
>gi|374705570|ref|ZP_09712440.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas sp. S9]
Length = 315
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 179/280 (63%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R G YID TFG+GGHS IL+ LG G+L+ DKD +++ G
Sbjct: 12 VLLDEAVEGLAV---RAGGRYIDGTFGRGGHSRLILDSLGPDGQLLGFDKDPLAIATGKA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELSAEAAVRGLSGKVSGILLDLGVSSPQLDDATRGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A+A+E I +V ++YGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGVSAAQWIASASEEEIARVFKEYGEERFAKRMARAVVARRAEQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 189 QVLTVANPAWEKGKNPATRAFQGLRIYINNELGDLEAGLDAAMETLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTKIPH--IDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ + K + R LPI FEP++K + +
Sbjct: 249 EDRIVKQFMRKHAKGEQDKLPRDLPIIPKAFEPRLKLIGK 288
>gi|15601999|ref|NP_245071.1| S-adenosyl-methyltransferase MraW [Pasteurella multocida subsp.
multocida str. Pm70]
gi|378774797|ref|YP_005177040.1| ribosomal RNA small subunit methyltransferase H [Pasteurella
multocida 36950]
gi|383310771|ref|YP_005363581.1| S-adenosyl-methyltransferase MraW [Pasteurella multocida subsp.
multocida str. HN06]
gi|425064898|ref|ZP_18468018.1| rRNA small subunit methyltransferase H [Pasteurella multocida
subsp. gallicida P1059]
gi|20139143|sp|Q9CPB4.1|RSMH_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|12720349|gb|AAK02218.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|356597345|gb|AET16071.1| ribosomal RNA small subunit methyltransferase H [Pasteurella
multocida 36950]
gi|380872043|gb|AFF24410.1| S-adenosyl-methyltransferase MraW [Pasteurella multocida subsp.
multocida str. HN06]
gi|404384613|gb|EJZ81046.1| rRNA small subunit methyltransferase H [Pasteurella multocida
subsp. gallicida P1059]
Length = 321
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILSRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHRSFSDIPRICERLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA+ IV+Y P++RT
Sbjct: 132 RMDTTQGLSASEWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTEPLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANAVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|423204264|ref|ZP_17190820.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AMC34]
gi|404627469|gb|EKB24270.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AMC34]
Length = 312
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 176/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL+ LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQHLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGIASYLDERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAEWLAKADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALEVLAPHGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPYGIPL 268
>gi|387813210|ref|YP_005428692.1| S-adenosyl-dependent methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338222|emb|CCG94269.1| S-adenosyl-dependent methyl transferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 319
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 186/286 (65%), Gaps = 5/286 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A+++L + NG Y+DATFG+GGHS IL +LG+ G+L+ IDKD E++++ +
Sbjct: 18 VLLDAAVDYLVTDE---NGRYVDATFGRGGHSRLILGKLGQDGQLLGIDKDPEAIAVARE 74
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ DSRF H F LD+ L++ ++DG+L DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 75 LASEDSRFQWYHGSFAGLDLALERQGWSQVDGVLMDLGVSSPQLDDASRGFSFMRDGPLD 134
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + SA++WLA A E I VI YGEERF+++IA+ +V R PI T+QL E
Sbjct: 135 MRMNPQQEPSAAQWLAEADEREIADVIWRYGEERFSRRIARLVVERRQEQPIETTRQLAE 194
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ +++K+PATR FQAIRI+IN+EL++L L +L GR+VVISFHSLE
Sbjct: 195 LVAEAVPKKEKHKHPATRAFQAIRIFINRELEDLEAGLAAAVDRLAPGGRLVVISFHSLE 254
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNI 510
DR+VK F+ + P + + +P+ E + + + + I
Sbjct: 255 DRLVKRFMRDLARGPKLPKGIPVTAEQEESGFQLIGKASKANEQEI 300
>gi|386834763|ref|YP_006240080.1| S-adenosyl-methyltransferase MraW [Pasteurella multocida subsp.
multocida str. 3480]
gi|385201466|gb|AFI46321.1| S-adenosyl-methyltransferase MraW [Pasteurella multocida subsp.
multocida str. 3480]
Length = 321
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILSRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHRSFSDIPRICERLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA+ IV+Y P++RT
Sbjct: 132 RMDTTQGLSASEWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTEPLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANAVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|330828037|ref|YP_004390989.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
B565]
gi|406674707|ref|ZP_11081901.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AMC35]
gi|423201399|ref|ZP_17187979.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AER39]
gi|423211275|ref|ZP_17197828.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AER397]
gi|328803173|gb|AEB48372.1| Ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
B565]
gi|404613870|gb|EKB10883.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AER397]
gi|404616958|gb|EKB13897.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AER39]
gi|404628710|gb|EKB25485.1| ribosomal RNA small subunit methyltransferase H [Aeromonas veronii
AMC35]
Length = 312
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 176/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +G+Y+D TFG+GGHS IL+ LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGVYVDGTFGRGGHSRLILQHLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGIASYLDERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAEWLAKADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL + L GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALEVLAPHGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPYGIPL 268
>gi|395008126|ref|ZP_10391814.1| S-adenosyl-methyltransferase MraW [Acidovorax sp. CF316]
gi|394313918|gb|EJE50880.1| S-adenosyl-methyltransferase MraW [Acidovorax sp. CF316]
Length = 309
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 12/282 (4%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L EA++ L +G ++DATFG+GGHS +IL RLG +GRL+A DKD E+++
Sbjct: 10 VLLEEAVDALLGGAGPEPSGTFVDATFGRGGHSRRILLRLGPQGRLVAFDKDPEAIAEAT 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L + G+L DLG+SS QI++ RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHLG----ELPAGSAAGVLMDLGVSSPQIDSPERGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVE 404
RMD TRG S ++WLA A I +VI+DYGEERFA IAK IV R P+ T +L
Sbjct: 126 RMDTTRGESVAQWLATAEVQQIAEVIRDYGEERFAGPIAKAIVARREERGPVATTGELAS 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ L GR+ VISFHSLE
Sbjct: 186 LVAGTVKTREPGQNPATRTFQALRIFINAELEELQQALEASLTVLQPGGRLAVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA--RCKP 504
DRIVK FI ++K + DRR P + MK LA R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP---FAAPQAMKLLALDRVKP 283
>gi|431928355|ref|YP_007241389.1| S-adenosyl-methyltransferase MraW [Pseudomonas stutzeri RCH2]
gi|431826642|gb|AGA87759.1| S-adenosyl-methyltransferase MraW [Pseudomonas stutzeri RCH2]
Length = 315
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 186/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L++ R +G Y+D TFG+GGHS +L++LG G+L+ DKD +++ G
Sbjct: 12 VLLDEAVAALSV---RPDGRYLDGTFGRGGHSRLLLQQLGPDGQLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + ++ + G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGEEVSQRGWAGTVSGVLLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++W+A A E I +V ++YGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMDPSRGLSAAEWIAQADEEEIARVFKEYGEERFAKRMARAVVQRRAEAPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ +RIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTEANPAWEKGKNPATRAFQGLRIYINNELGDLERGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K + R LPI FEP++K L + + +K
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLLGKPQYASDAEVK 298
>gi|387126890|ref|YP_006295495.1| rRNA small subunit methyltransferase H [Methylophaga sp. JAM1]
gi|386273952|gb|AFI83850.1| rRNA small subunit methyltransferase H [Methylophaga sp. JAM1]
Length = 312
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 181/279 (64%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + L I+ +GIY+DATFG+GGHS IL++L GRL+ +D+D +V G
Sbjct: 11 VLLKETVEGLFIQP---DGIYVDATFGRGGHSRAILQQLSANGRLLGLDRDPTAVEAGQA 67
Query: 287 I--TDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ TDSRF+I H F+EL +I + K++GIL D+G+SS Q++ RGFSF DGPL
Sbjct: 68 LAKTDSRFAIEHCAFSELSTVIHSRLWQGKVNGILMDIGVSSPQLDEAERGFSFQHDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T G+SA++WLA+A I VI+ GEER+ K+IA IV R TPIT TKQL
Sbjct: 128 DMRMDPTFGMSAAEWLASAEMNEIATVIKTLGEERYGKRIASAIVETREHTPITTTKQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ K+ ++K+PATRTFQAIRI+IN EL+ L+ AL+ + L + GR+VVISFHSL
Sbjct: 188 DLVDKASPTRDKFKHPATRTFQAIRIFINSELEELTSALEQALEVLAVGGRLVVISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK F K + P+ P+++ + +
Sbjct: 248 EDRIVKRFFRDQAKGDDLPAHFPVTADQLNPRLRIIGKA 286
>gi|254238917|ref|ZP_04932240.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126170848|gb|EAZ56359.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 313
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANA E I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANAAEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|334706085|ref|ZP_08521951.1| S-adenosyl-methyltransferase MraW [Aeromonas caviae Ae398]
Length = 312
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 175/262 (66%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + +GIY+D TFG+GGHS IL+ LG GRLIAID+D ++++ K
Sbjct: 10 VLLHEAVEGLAI---KPDGIYVDGTFGRGGHSRLILQHLGPNGRLIAIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I+H F+ + L + + K+DG L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFEIVHGPFSGITRYLTERGLLGKVDGFLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T G SA++WLA A +I V++ +GEERFAKKIA+ IVH R P RT+QL E+
Sbjct: 127 RMDPTSGQSAAEWLARADVDDIAWVLKTFGEERFAKKIARAIVHDRVTEPYVRTRQLAEM 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++ K+ ATR+FQAIRIYIN EL + AL L GR+ VISFHSLED
Sbjct: 187 IARVNPSKEKGKHAATRSFQAIRIYINSELDEIETALNGALDVLAPHGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI + K P + +P+
Sbjct: 247 RLVKHFIRKHEKGPEVPHGIPL 268
>gi|332305217|ref|YP_004433068.1| S-adenosyl-methyltransferase MraW [Glaciecola sp. 4H-3-7+YE-5]
gi|332172546|gb|AEE21800.1| S-adenosyl-methyltransferase MraW [Glaciecola sp. 4H-3-7+YE-5]
Length = 311
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ L+I + +G+Y+DATFG+GGHS +IL +L KGRLIA+D+D ++
Sbjct: 10 VLLQESLDGLSI---KPDGVYLDATFGRGGHSKQILTQLSDKGRLIALDRDPSAIKSAKA 66
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFSI H F+E++ +L + K+DGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 LANDPRFSIHHCNFSEMEDVLTSLELHGKVDGILMDLGVSSPQLDEPERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T+G SA++WLA+A E +I +VI+++GEE+F K+IA IV+ R PIT T QL E
Sbjct: 127 MRMNPTKGQSAAQWLAHAEEQDIAQVIKEFGEEKFGKRIAHGIVNARQQAPITTTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ ++K+PATR+FQ IRIYIN EL + LK LN GR+ VISFHSLE
Sbjct: 187 IIDIAVPVKDKFKHPATRSFQGIRIYINSELDEIRTGLKSALNSLNSGGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DR+VK FI ++ + LPI
Sbjct: 247 DRLVKRFIREQSRGLQVPHGLPIMQ 271
>gi|410088653|ref|ZP_11285343.1| rRNA small subunit methyltransferase H [Morganella morganii SC01]
gi|421494653|ref|ZP_15941997.1| MRAW [Morganella morganii subsp. morganii KT]
gi|455740217|ref|YP_007506483.1| rRNA small subunit methyltransferase H [Morganella morganii subsp.
morganii KT]
gi|400191076|gb|EJO24228.1| MRAW [Morganella morganii subsp. morganii KT]
gi|409764899|gb|EKN49024.1| rRNA small subunit methyltransferase H [Morganella morganii SC01]
gi|455421780|gb|AGG32110.1| rRNA small subunit methyltransferase H [Morganella morganii subsp.
morganii KT]
Length = 313
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 192/287 (66%), Gaps = 9/287 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L I R +GIYID TFG+GGHS IL +LG +GRLIAID+D ++++ +
Sbjct: 11 VLLDEAVNGLQI---REDGIYIDGTFGRGGHSRLILSKLGPQGRLIAIDRDPQAIAAAAQ 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + + + +I+G+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDPRFSIIHGPFSGIAGYVNDLELGGQINGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITPITRTKQLVE 404
RMD TRGISA++WL A E +I V++++GEERF+K+IA+ IV ++ P+TRTKQL +
Sbjct: 128 RMDPTRGISAAQWLTEAKEEDIAWVLKNFGEERFSKRIARAIVERNKTEEPLTRTKQLAD 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I +++K+PATR+FQAIRIY+N EL + AL L GR+ VISFHSLE
Sbjct: 188 LIAAVSPVKEKHKHPATRSFQAIRIYVNSELDEIRQALTGALGILAQGGRLSVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFE----PKMKFLARCKPKKK 507
DRIVK F+ ++ P + LP+ + P +K + KP ++
Sbjct: 248 DRIVKQFMRDESRGPQVPHGLPLTEEQLKAHGTPALKLAGKMKPSEQ 294
>gi|261867472|ref|YP_003255394.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412804|gb|ACX82175.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 322
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 183/268 (68%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L G+LIAID+D ++V+ K
Sbjct: 15 VLLHETVDGLALKE---NGIYIDGTFGRGGHSRLILSQLSVNGKLIAIDRDPQAVAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+E+ I +K+ + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFHIEHNTFSEILPICEKFGLVGKVDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++GISA++WLA +E ++ V++ +GEERFAK+IAK IV Y + RT
Sbjct: 132 RMDSSKGISAAEWLAQVSEQDLAWVLKTFGEERFAKRIAKVIVDYNKSAVQNGGEFLART 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ +YK+PATR+FQAIRIYIN EL L L+ L KGR+ VIS
Sbjct: 192 LQLAELITQAVPFKDKYKHPATRSFQAIRIYINAELDELENVLQSALSVLAPKGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKQFMRKQSQGEVIPKGLPL 279
>gi|190149279|ref|YP_001967804.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307262590|ref|ZP_07544221.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|263446582|sp|B3GZK0.1|RSMH_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|189914410|gb|ACE60662.1| S-adenosyl-methyltransferase MraW [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306872088|gb|EFN03801.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 313
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 186/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + +GIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPSGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDTRFQIVHTAFSAIPDVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSITP-ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y +S T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSADDLAWVLKTFGEERFAKRIAQAVVSYNKSATDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMDVPKGLPI 271
>gi|119897167|ref|YP_932380.1| S-adenosyl-methyltransferase MraW [Azoarcus sp. BH72]
gi|263446774|sp|A1K3T8.1|RSMH_AZOSB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|119669580|emb|CAL93493.1| SAM dependent methyltransferase [Azoarcus sp. BH72]
Length = 312
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 189/302 (62%), Gaps = 14/302 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L I+ E GIY+D TFG+GGHS +L RLG GRLIA D+D +++ G
Sbjct: 10 VLLTEAVDALAIKPE---GIYVDGTFGRGGHSRAVLARLGAGGRLIAFDRDPAAIAAGQA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D R ++H F+E ++L + + +DG+L DLG+SS Q+++ RG SF D PLDMR
Sbjct: 67 IADPRLELVHAPFSEFAVVLDRLGVSAVDGVLLDLGVSSPQLDDASRGMSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG + ++WLA A+ I +VI+DYGEERFA IAK I R+ I T QL I+
Sbjct: 127 MDTSRGRTVAEWLAEASVAEITEVIRDYGEERFAYAIAKAIAAARTGGAIATTGQLAAIV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
K++R + ++PATR+FQA+RI+INQEL+ L+ L +L+ GR+VVISFHSLEDR
Sbjct: 187 EKAVRTREPGQHPATRSFQALRIFINQELEELTTVLPDCVARLSEGGRLVVISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCK----------PKKKLNIKKYED 515
IVK F+ + P + RLP+ L P+++ + + + P+ + + + +
Sbjct: 247 IVKRFLRDEARPPQLPSRLPVRAADLPPPRLQLVGKAQRPGEAEVAANPRARSAVMRVAE 306
Query: 516 YC 517
C
Sbjct: 307 RC 308
>gi|410628621|ref|ZP_11339339.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
mesophila KMM 241]
gi|410151625|dbj|GAC26108.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
mesophila KMM 241]
Length = 311
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I+ L I + +GIY+DATFG+GGH+ +IL +L GR+IA+D+D ++
Sbjct: 10 VLLQESIDGLAI---KPDGIYLDATFGRGGHTKQILSQLSSNGRVIALDRDPSAIEAAKV 66
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+RFSI H F+E++ +L + K+DGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 LANDARFSIHHCNFSEMEDVLTSLELHGKVDGILMDLGVSSPQLDEPERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T+G SA++WLA+A E +I +VI+++GEE+F K+IA IV+ R TPIT T QL E
Sbjct: 127 MRMNPTKGQSAAQWLAHAEEQDIAQVIKEFGEEKFGKRIAHGIVNARQETPITTTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ ++K+PATR+FQ IRIYIN EL + LK LN GR+ VISFHSLE
Sbjct: 187 IIDLAVPVKDKFKHPATRSFQGIRIYINSELDEIRTGLKAALNSLNSGGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DR+VK FI ++ + LPI
Sbjct: 247 DRLVKRFIREQSRGLQVPHGLPIMQ 271
>gi|33151483|ref|NP_872836.1| S-adenosyl-methyltransferase MraW [Haemophilus ducreyi 35000HP]
gi|42559455|sp|Q7VP62.1|RSMH_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|33147703|gb|AAP95225.1| S-adenosyl-methyltransferase MraW [Haemophilus ducreyi 35000HP]
Length = 313
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 183/264 (69%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL RL GRLIAID+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSRLATNGRLIAIDRDPCAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D+RF IIH F+ + + + + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ISDARFQIIHTAFSAIPEVCESLGLMGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP--ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y ITRT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSIEDLAWVLKTFGEERFAKRIAQAVVSYNKTNSEKITRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN+EL L AL + L +GR+ +ISFHSL
Sbjct: 188 KIIADAVPFKDKHKHPATRSFQAIRIFINRELDELEKALTNALRVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGEVVPKGLPI 271
>gi|116052453|ref|YP_792766.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421176561|ref|ZP_15634224.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa CI27]
gi|122257540|sp|Q02H20.1|RSMH_PSEAB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|115587674|gb|ABJ13689.1| putative methyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|404530895|gb|EKA40878.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa CI27]
Length = 313
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGTGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++ANATE I +V + YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIANATEEEIARVFKVYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K ++ R LPI + +FEP++K L + +
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQ 288
>gi|307244811|ref|ZP_07526910.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307253765|ref|ZP_07535619.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307258222|ref|ZP_07539965.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306854256|gb|EFM86462.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306863249|gb|EFM95189.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306867682|gb|EFM99527.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 313
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 185/264 (70%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSEQGRLIATDRDPRAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF I H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 IDDTRFQIEHTAFSAIPDVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY-RSIT-PITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ +V Y +S T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSADDLAWVLKTFGEERFAKRIAQAVVSYNKSATNKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMDVPKGLPI 271
>gi|109899828|ref|YP_663083.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas atlantica T6c]
gi|123170716|sp|Q15Q09.1|RSMH_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|109702109|gb|ABG42029.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas atlantica T6c]
Length = 311
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 179/265 (67%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I+ L I + +G+Y+DATFG+GGH+ +IL +L GRLIA+D+D ++
Sbjct: 10 VLLQESIDGLAI---KPDGVYLDATFGRGGHTKQILSQLSPNGRLIALDRDPSAIEAAKA 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D +RFSI H F+E++ +L + K+DGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 LADDARFSIHHCNFSEMEDVLTSLELHGKVDGILMDLGVSSPQLDEPERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T+G SA++WLA+A E +I +VI+++GEE+F K+IA IV+ R PIT T QL E
Sbjct: 127 MRMNPTKGQSAAQWLAHAEEQDIAQVIKEFGEEKFGKRIAHGIVNARQEAPITTTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ ++K+PATR+FQ IRIYIN EL + LK LN GR+ VISFHSLE
Sbjct: 187 IIDLAVPVKDKFKHPATRSFQGIRIYINSELDEIRTGLKAALNSLNSGGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DR+VK FI ++ + LPI
Sbjct: 247 DRLVKRFIREQSRGLQVPHGLPIMQ 271
>gi|444920637|ref|ZP_21240477.1| Ribosomal RNA small subunit methyltransferase H [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444508207|gb|ELV08379.1| Ribosomal RNA small subunit methyltransferase H [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 308
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 181/277 (65%), Gaps = 6/277 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKD-TESVSLGN 285
+ LNEAIN LNI+ G+Y+D TFG+GGHS +IL+RL G LI+ID+D T
Sbjct: 9 VLLNEAINALNIQPA---GVYVDGTFGRGGHSSEILKRL-TAGHLISIDRDPTAQACAKE 64
Query: 286 KITDSR-FSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +S F+ C +++ + + +K+DG+L D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 65 RFKESENFTFFAGCMSDIKAAVASAHFEKVDGVLLDIGVSSPQLDDAERGFSFMKDGPLD 124
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G+SA+ W+A + + V +++GEERFA KIA I+ R + PI T QL +
Sbjct: 125 MRMDPTSGVSAATWVATSDFATMASVFREFGEERFAGKIAGHIIKCRELAPIETTHQLAD 184
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II +++ ++K+PATR FQAIRI +N+EL LS L + LN GR+VVISFHSLE
Sbjct: 185 IISEAVPFKDKHKHPATRVFQAIRIAVNEELTELSQTLTAAYDLLNPGGRLVVISFHSLE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR 501
DRIVKNF+N + K + LP+ ++ EP +K + +
Sbjct: 245 DRIVKNFMNHHAKPKDLLPDLPVAQFVSEPTLKLIGK 281
>gi|357406926|ref|YP_004918850.1| S-adenosyl-dependent methyl transferase MraW [Methylomicrobium
alcaliphilum 20Z]
gi|351719591|emb|CCE25267.1| S-adenosyl-dependent methyl transferase MraW [Methylomicrobium
alcaliphilum 20Z]
Length = 308
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 182/267 (68%), Gaps = 7/267 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSL--G 284
+ +EA+ L I + +GIYID TFG+GGHS IL RLG GRL+A+D+D +++
Sbjct: 6 VLFSEALQALAI---KTDGIYIDCTFGRGGHSRGILNRLGPSGRLLALDRDADAIQSEWA 62
Query: 285 NKI-TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGP 342
+I +D RFS+ H CF+ L I ++ +++ ++DG+L DLG+SS Q++ RGFSFL DGP
Sbjct: 63 REIASDKRFSLHHACFSSLQAIAEQEHVQGRVDGLLMDLGVSSPQLDTPERGFSFLYDGP 122
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL 402
LDMRMD G+SA++WLA E ++ +V+ ++GEERFA++IA+ IV R P++ T+QL
Sbjct: 123 LDMRMDHRSGLSAAQWLAEVDERDLVQVLFEFGEERFARRIARAIVEQRREQPLSTTRQL 182
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E+I+ S+ +++K+PATRTFQAIRI +N+EL+ L L+ L GR+VVISFHS
Sbjct: 183 AELIVNSVPVREKHKHPATRTFQAIRIAVNRELEELKSGLEQAVDVLKPGGRLVVISFHS 242
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN 489
LEDRI K FI + + RLPI
Sbjct: 243 LEDRIAKRFIRAESGAKYDPGRLPIME 269
>gi|339477909|ref|YP_004706729.1| S-adenosyl-methyltransferase MraW [Candidatus Moranella endobia
PCIT]
gi|338172460|gb|AEI74861.1| S-adenosyl-methyltransferase MraW [Candidatus Moranella endobia
PCIT]
Length = 327
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 187/289 (64%), Gaps = 11/289 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ LN+ R +GIY D TFG+GGHS IL +L +GRL AID D ++
Sbjct: 20 VLLNEAVHGLNL---RPDGIYFDGTFGRGGHSRLILSKLNAQGRLFAIDCDPAAIEAAQT 76
Query: 287 ITDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF+I+H F+ LD I ++ + +IDGIL DLG+SS QI++ RGFSF+ DGPLDM
Sbjct: 77 IDDTRFTIVHKPFSAMLDYIAERDLVGQIDGILLDLGVSSPQIDDPARGFSFMRDGPLDM 136
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV-HYRSITPITRTKQLVE 404
RMD T G SA++WLA A+ I V++ +GEERFAK+IA+ IV R PITRT +L
Sbjct: 137 RMDNTSGQSAAQWLAQASVDEISWVLKTFGEERFAKRIAQAIVARNRQRPPITRTLELAA 196
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I K+I + K+PATR+FQAIRIYIN EL+ + AL + L GR+ VISFHS+E
Sbjct: 197 LITKAIPFHDNRKHPATRSFQAIRIYINCELEEIERALNCALQGLAPYGRLAVISFHSIE 256
Query: 465 DRIVKNFINFNTKIPHIDRRLPIY------NYLFEPKMKFLARCKPKKK 507
DR+VK FI ++ IP + +P+ Y ++K L + P +
Sbjct: 257 DRLVKQFIYQHSYIPQVPVGIPLTEAQISAQYQHWRQLKILGKIHPSAQ 305
>gi|421503355|ref|ZP_15950304.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas mendocina DLHK]
gi|400345828|gb|EJO94189.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas mendocina DLHK]
Length = 314
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 177/280 (63%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R G YID TFG+GGHS IL +LG GRL+ DKD +++ G
Sbjct: 11 VLLDEAVEGLAV---RAEGCYIDGTFGRGGHSRLILHKLGPGGRLLGFDKDPLAIATGEA 67
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + + ++ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 68 LAAEDGRFVVVQRSFAELGDEAVVRGISGQVSGILLDLGVSSPQLDDPERGFSFLNDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G+SA+ W+A A E I +V++DYGEERFAK++A+ +V R P TRT L
Sbjct: 128 DMRMNPDVGVSAADWIATAEEDEIARVLKDYGEERFAKRMARAVVQRREQQPFTRTADLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ IRIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 188 KVLTEANPAWEKGKNPATRAFQGIRIYINNELGDLERGLDAALETLEVGGRLVVISFHSL 247
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ K + R LPI FEP++K + +
Sbjct: 248 EDRIVKQFMKRQAKGEADKLPRDLPIIPKAFEPRLKLIGK 287
>gi|146305949|ref|YP_001186414.1| S-adenosyl-methyltransferase MraW [Pseudomonas mendocina ymp]
gi|262825105|sp|A4XQR6.1|RSMH_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145574150|gb|ABP83682.1| S-adenosyl-methyltransferase MraW [Pseudomonas mendocina ymp]
Length = 314
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 178/280 (63%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G YID TFG+GGHS IL +LG GRL+ DKD +++ G
Sbjct: 11 VLLDEAVEGLAV---RADGCYIDGTFGRGGHSRLILHKLGPGGRLLGFDKDPLAIATGEA 67
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + + ++ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 68 LAAEDGRFVVVQRSFAELGDEAVVRGISGQVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G+SA+ W+A A E I +V++DYGEERFAK++A+ +V R P TRT L
Sbjct: 128 DMRMNPDVGVSAADWIATAEEDEIARVLKDYGEERFAKRMARAVVQRREQQPFTRTADLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ IRIY+N EL +L L + L + GR+VVISFHSL
Sbjct: 188 KVLTEANPAWEKGKNPATRAFQGIRIYVNNELGDLERGLDAALEALEVGGRLVVISFHSL 247
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ K + R LPI FEP++K + +
Sbjct: 248 EDRIVKQFMKRQAKGEADKLPRDLPIIPKAFEPRLKLIGK 287
>gi|264680254|ref|YP_003280164.1| S-adenosyl-methyltransferase MraW [Comamonas testosteroni CNB-2]
gi|262210770|gb|ACY34868.1| S-adenosyl-methyltransferase MraW [Comamonas testosteroni CNB-2]
Length = 309
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 184/284 (64%), Gaps = 16/284 (5%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L+EA++ L + G ++DATFG+GGHS IL+RLG GRLIA DKD ++++
Sbjct: 10 VLLDEAVDALLGGAAKPPAGQWVDATFGRGGHSRLILQRLGPDGRLIAFDKDPDAIAEAA 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L + + + G+L DLG+SS QI+N RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHLGELPEG----SVQGVLMDLGVSSPQIDNPDRGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQLVE 404
RMD TRG S ++WL +A I +VI+DYGEERFA IAK IV R S P+ T +L +
Sbjct: 126 RMDTTRGQSVAEWLEDAEVQQIAEVIRDYGEERFAGPIAKAIVARRESQGPLRTTAELAQ 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ + L GR+ VISFHSLE
Sbjct: 186 LVAGAVKTREAGQNPATRTFQALRIFINAELQELEQALEASLRVLAPGGRLAVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
DRIVK FI ++K + DRR P F P ++K L R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP-----FAPPAPMRLKALERIKP 283
>gi|392422318|ref|YP_006458922.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri CCUG
29243]
gi|390984506|gb|AFM34499.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri CCUG
29243]
Length = 315
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/280 (44%), Positives = 181/280 (64%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L++ R +G Y+D TFG+GGHS +L++LG G L+ DKD +++ G
Sbjct: 12 VLLDEAVAALSV---RPDGRYLDGTFGRGGHSRLLLQQLGPDGLLLGFDKDPLAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + ++ + G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGEEVAQRGWSGTVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA+ W+A+A E I +V +DYGEERFAK++A+ +V R P RT L
Sbjct: 129 DMRMDPSRGVSAADWIAHADEDEIARVFKDYGEERFAKRMARAVVQRREAAPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ +RIYIN EL +L L + L + GR+VVISFHSL
Sbjct: 189 KVLTEANPAWEKGKNPATRAFQGLRIYINNELGDLEHGLDAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ + K + R LPI FEP++K L +
Sbjct: 249 EDRIVKQFMRRHAKGEADKLPRDLPIIPKAFEPRLKLLGK 288
>gi|337278594|ref|YP_004618065.1| S-adenosyl-methyltransferase [Ramlibacter tataouinensis TTB310]
gi|334729670|gb|AEG92046.1| Candidate S-adenosyl-methyltransferase (division cell wall cluster)
[Ramlibacter tataouinensis TTB310]
Length = 285
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 170/263 (64%), Gaps = 9/263 (3%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
+G+Y+DATFG+GGHS ++L+RL +GRL+A DKD E+V+ +I D RFSI H F L
Sbjct: 6 DGLYVDATFGRGGHSRRLLQRLSPQGRLLAFDKDPEAVAEAGRIQDPRFSIRHQGFARL- 64
Query: 304 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
+ G+L DLG+SS QI+N RGFSF DGPLDMRMD TRG SA+ WLA A
Sbjct: 65 ---GELEPASASGVLLDLGVSSPQIDNPARGFSFRHDGPLDMRMDPTRGQSAADWLATAE 121
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEIILKSIRGNKRYKNPATR 422
I +VI+DYGEERFA IAK I R P+ T +L +++ +++ + ++PATR
Sbjct: 122 IGQIAEVIRDYGEERFAVPIAKAIAARRQERGPVASTAELAQLVAGAVKTREPGQDPATR 181
Query: 423 TFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHID 482
TFQA+RI++N EL+ L AL+ L +GR+V ISFHSLEDRIVK FI +++ +D
Sbjct: 182 TFQALRIFVNAELEELQQALEASLDILQPQGRLVAISFHSLEDRIVKQFIARHSRE-VVD 240
Query: 483 RRLPIYNYLFEP-KMKFLARCKP 504
RR P P K++ R KP
Sbjct: 241 RRAPFAQPA--PLKLRAQGRVKP 261
>gi|343509761|ref|ZP_08747023.1| S-adenosyl-methyltransferase MraW [Vibrio scophthalmi LMG 19158]
gi|343517248|ref|ZP_08754257.1| S-adenosyl-methyltransferase MraW [Vibrio sp. N418]
gi|342794170|gb|EGU29952.1| S-adenosyl-methyltransferase MraW [Vibrio sp. N418]
gi|342803558|gb|EGU38908.1| S-adenosyl-methyltransferase MraW [Vibrio scophthalmi LMG 19158]
Length = 316
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/266 (48%), Positives = 182/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D +++ NK
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIEEANK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++YN + ++DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAERYNLVGQVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GIS S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGISVSQWLLEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI ++ P + LP+
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLPL 272
>gi|325980947|ref|YP_004293349.1| S-adenosyl-methyltransferase MraW [Nitrosomonas sp. AL212]
gi|325530466|gb|ADZ25187.1| S-adenosyl-methyltransferase MraW [Nitrosomonas sp. AL212]
Length = 308
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 177/265 (66%), Gaps = 5/265 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A++ L ++ E GIY+DATFG+GGHS IL LG+ GRLIA+D+D +V G
Sbjct: 5 VLLHAAVDALALKPE---GIYVDATFGRGGHSRLILSGLGECGRLIALDRDPAAVLSGEA 61
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RF I H F+ + IL+ I +IDG+L DLG+SS Q+ + RGFSF GPLDMR
Sbjct: 62 ITDKRFCIRHGSFSRVREILQAMEITRIDGVLLDLGVSSPQLEDTARGFSFRSAGPLDMR 121
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD + G +AS+WL+ +E ++ VI++YGEERFA++IA+ I+ R+ PI T QL I+
Sbjct: 122 MDTSGGQTASEWLSTVSESELEWVIKEYGEERFARQIARAILAARTQQPIATTLQLAGIV 181
Query: 407 LKSIRGNKR--YKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+R +R ++PATRTFQAIRIY+N+EL+ L++ L L GR+VVISFHSLE
Sbjct: 182 AAVVRARQRDSKRHPATRTFQAIRIYLNRELEELALVLPQCVDLLRPGGRLVVISFHSLE 241
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DR+VK FI ++ R +P+
Sbjct: 242 DRMVKQFIRAAASTDNLPRGVPVRE 266
>gi|452876895|ref|ZP_21954227.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
VRFPA01]
gi|452186308|gb|EME13326.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas aeruginosa
VRFPA01]
Length = 315
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 188/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 12 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGTGGRLLGFDKDPQAIQTGKA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A+A E I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 129 DMRMNPGQGISAAEFIASAAEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 189 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K ++ R LPI + +FEP++K L + + + +K
Sbjct: 249 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQYASEAELK 298
>gi|399519372|ref|ZP_10760167.1| S-adenosyl-methyltransferase MraW [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112468|emb|CCH36725.1| S-adenosyl-methyltransferase MraW [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 314
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 182/280 (65%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL++LG GRL+ DKD +++ G
Sbjct: 11 VLLDEAVEGLAV---RGDGRYMDGTFGRGGHSRLILQKLGPDGRLLGFDKDPLAIATGEA 67
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + + ++ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 68 LAAEDGRFVVVQRSFAELGDEAVVRGISGQVAGILLDLGVSSPQLDDPERGFSFLNDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G+SA+ W+A+A E I +V++DYGEERFAK++A+ +V R+ P TRT L
Sbjct: 128 DMRMNPDAGVSAADWIASADEDEIARVMKDYGEERFAKRMARAVVQRRAEQPFTRTADLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ IRI+IN EL +L L+ + L + GR+VVISFHSL
Sbjct: 188 KVLTEANPAWEKGKNPATRAFQGIRIFINNELGDLERGLEAALETLEVGGRLVVISFHSL 247
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ K + R LPI FEP++K + +
Sbjct: 248 EDRIVKQFMKRQAKGEADKLPRDLPIIPKAFEPRLKLIGK 287
>gi|152988306|ref|YP_001350328.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa PA7]
gi|262825003|sp|A6VB93.1|RSMH_PSEA7 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|150963464|gb|ABR85489.1| S-adenosyl-methyltransferase MraW [Pseudomonas aeruginosa PA7]
Length = 313
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 188/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L R +G Y+D TFG+GGHS +LE+LG GRL+ DKD +++ G
Sbjct: 10 VLLEEAVSALA---PREDGCYLDGTFGRGGHSRALLEKLGTGGRLLGFDKDPQAIQTGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ ++DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A+A E I +V ++YGEERFAK++A+ IV R P RT L
Sbjct: 127 DMRMNPGQGISAAEFIASAAEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 EVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K ++ R LPI + +FEP++K L + + + +K
Sbjct: 247 EDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQYASEAELK 296
>gi|330501916|ref|YP_004378785.1| S-adenosyl-methyltransferase MraW [Pseudomonas mendocina NK-01]
gi|328916202|gb|AEB57033.1| S-adenosyl-methyltransferase MraW [Pseudomonas mendocina NK-01]
Length = 315
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 181/280 (64%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL++LG GRL+ DKD +++ G
Sbjct: 12 VLLDEAVEGLAV---RADGCYMDGTFGRGGHSRLILQKLGPGGRLLGFDKDPLAIATGEA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + + ++ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGDEAVVRGISGQVSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G+SA+ W+A A E I +V++DYGEERFAK++A+ +V R+ P TRT L
Sbjct: 129 DMRMNPHAGVSAADWIATADEDEIARVMKDYGEERFAKRMARAVVQRRAERPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ KNPATR FQ IRI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 KVLTEANPAWEKGKNPATRAFQGIRIHVNNELGDLERGLEAALETLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ K + R LPI FEP++K + +
Sbjct: 249 EDRIVKQFMKRQAKGEADKLPRDLPIIPKAFEPRLKLIGK 288
>gi|421262847|ref|ZP_15713932.1| 16S rRNA m(4)C1402 methyltransferase [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401690260|gb|EJS85541.1| 16S rRNA m(4)C1402 methyltransferase [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 321
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILFRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHRSFSDIPRICEQLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA+ IV+Y P++RT
Sbjct: 132 RMDTTQGLSASEWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTEPLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANAVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|410637804|ref|ZP_11348374.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
lipolytica E3]
gi|410142490|dbj|GAC15579.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
lipolytica E3]
Length = 316
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 185/263 (70%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L+I + +GIY+DATFG+GGH+ K+L++L GRLIA+D+D ++ +
Sbjct: 15 VLLDESIEGLDI---KPDGIYMDATFGRGGHTEKVLQKLSDSGRLIALDRDPYAIEAAKR 71
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RFSI H F+ ++ + KK+++ K+DGIL DLG+SS Q+++ RGFSF+ +GPLD
Sbjct: 72 FANDQRFSIEHVAFSNIEEVAKKHDVFGKVDGILMDLGVSSPQLDDAQRGFSFMREGPLD 131
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G+SA++WLA A E +I +VI+++GEE+F K+IA IV+ R P+ T QL +
Sbjct: 132 MRMDTSKGMSAAQWLAKAEEDDITQVIKEFGEEKFGKRIAHAIVNSRDEFPLETTLQLAK 191
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ ++K+PATRTFQAIRIYIN EL + LK + L+ GR+ VISFHSLE
Sbjct: 192 LVDEAVPVKDKFKHPATRTFQAIRIYINSELDEVRDGLKSALECLSSGGRLAVISFHSLE 251
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ ++ + R+ I
Sbjct: 252 DRLVKRFMREQSRGMQVPARMAI 274
>gi|365089145|ref|ZP_09328116.1| 16S rRNA m(4)C1402 methyltransferase [Acidovorax sp. NO-1]
gi|363416844|gb|EHL23940.1| 16S rRNA m(4)C1402 methyltransferase [Acidovorax sp. NO-1]
Length = 308
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 177/282 (62%), Gaps = 12/282 (4%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ LNEA++ L G ++DATFG+GGHS IL RLG +GRL+A DKD E+++
Sbjct: 10 VLLNEAVDALLGGAGPEPAGTWVDATFGRGGHSRLILLRLGPQGRLVAFDKDPEAIAEAT 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L G+L DLG+SS QI++ RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHL----ADLPPASAAGVLMDLGVSSPQIDSPERGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVE 404
RMD TRG S + WLA A I +VI+DYGEERFA IAK IV R P+ T +L +
Sbjct: 126 RMDTTRGTSVADWLATAEVGQIAEVIRDYGEERFAGPIAKAIVARREERGPLATTAELAD 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ L GR+VVISFHSLE
Sbjct: 186 LVAGAVKTREAGQNPATRTFQALRIFINAELEELQQALEASLSVLQPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA--RCKP 504
DRIVK FI ++K + DRR P + MK +A R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP---FAAPQAMKLVALDRIKP 283
>gi|322513875|ref|ZP_08066954.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Actinobacillus ureae ATCC 25976]
gi|322120274|gb|EFX92221.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Actinobacillus ureae ATCC 25976]
Length = 313
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 183/264 (69%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ N
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLSERGRLIATDRDPSAIAEANT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD+RF I+H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DG LDM
Sbjct: 68 ITDARFQIVHTAFSAIPEVCEQLGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGSLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP--ITRTKQLV 403
RMD T+G+SA++WLA + ++ V++ +GEERFAK+IA+ + Y T I+RT QL
Sbjct: 128 RMDTTKGLSAAEWLAQVSVDDLAWVLKTFGEERFAKRIAQAVFSYNKSTTDKISRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL+ L +GR+ +ISFHSL
Sbjct: 188 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALQSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + + LPI
Sbjct: 248 EDRMVKQFMKKNSKGMDVPKGLPI 271
>gi|417853547|ref|ZP_12498912.1| 16S rRNA m(4)C1402 methyltranserfase [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219355|gb|EGP05031.1| 16S rRNA m(4)C1402 methyltranserfase [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 321
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 181/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILSRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHRSFSDIPRICERLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL +E ++ V++ +GEERFAK+IA+ IV+Y P++RT
Sbjct: 132 RMDTTQGLSAREWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTEPLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANTVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|387121175|ref|YP_006287058.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415756267|ref|ZP_11481005.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416038502|ref|ZP_11574153.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416044373|ref|ZP_11575000.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416058654|ref|ZP_11580656.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416071298|ref|ZP_11583763.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429733340|ref|ZP_19267587.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans Y4]
gi|347994960|gb|EGY36190.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347996258|gb|EGY37361.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998640|gb|EGY39551.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|347999516|gb|EGY40340.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348655838|gb|EGY71269.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875667|gb|AFI87226.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429155072|gb|EKX97773.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans Y4]
Length = 322
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 182/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L G+LIAID+D ++V+ K
Sbjct: 15 VLLHETVDGLALKE---NGIYIDGTFGRGGHSRLILSQLSVNGKLIAIDRDPQAVAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+E+ I +K+ + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNTFSEILPICEKFGLVGKVDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++GISA++WLA +E ++ V++ +GEERFAK+IAK IV Y + RT
Sbjct: 132 RMDSSKGISAAEWLAQVSEQDLAWVLKTFGEERFAKRIAKVIVDYNKSAVQNGGEFLART 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ +YK+PATR+FQAIRIYIN EL L L+ L KGR+ VIS
Sbjct: 192 LQLAELIAQAVPFKDKYKHPATRSFQAIRIYINAELDELENVLQSALSVLAPKGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKQFMRKQSQGEVIPKGLPL 279
>gi|333982006|ref|YP_004511216.1| Ribosomal RNA small subunit methyltransferase H [Methylomonas
methanica MC09]
gi|333806047|gb|AEF98716.1| Ribosomal RNA small subunit methyltransferase H [Methylomonas
methanica MC09]
Length = 309
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 178/262 (67%), Gaps = 7/262 (2%)
Query: 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV---SLGNK 286
EA++ L I + +G+YID TFG+GGHS ILE+LGK G+L+A D+D +++ G
Sbjct: 10 EEALDSLRI---KADGVYIDCTFGRGGHSFGILEKLGKNGKLLAFDRDIDAINSPEAGQL 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
++D RF + H CF +L + ++ ++DGIL DLG+SS Q++N RGFSFL DGPLDM
Sbjct: 67 LSDQRFHLHHGCFADLAAVSEQLGYTGRVDGILMDLGVSSPQLDNAERGFSFLRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD G++A+++LA TE ++ KV+ +YGEERFA++IAK IV P+ T QL ++
Sbjct: 127 RMDTNHGLTAAQYLAQVTEQDLVKVLFEYGEERFARRIAKAIVERCRQQPLQTTLQLAKL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I S+ +YK+PATR FQAIRI INQEL+ + AL+ + L GR+VVI+FHSLED
Sbjct: 187 IEDSVPFKDKYKHPATRAFQAIRIEINQELEQVKTALQQAIQILAPGGRLVVIAFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVK FI + + H +LPI
Sbjct: 247 RIVKRFIRGESGLKHNPGKLPI 268
>gi|421250901|ref|ZP_15707196.1| 16S rRNA m(4)C1402 methyltransferase, partial [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|401698989|gb|EJS90617.1| 16S rRNA m(4)C1402 methyltransferase, partial [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
Length = 304
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILFRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHRSFSDIPRICEQLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA+ IV+Y P++RT
Sbjct: 132 RMDTTQGLSASEWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTEPLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANAVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|365967270|ref|YP_004948832.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|415769384|ref|ZP_11484172.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416073887|ref|ZP_11584350.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|416103059|ref|ZP_11589114.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444337662|ref|ZP_21151601.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|444345352|ref|ZP_21153373.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|444347751|ref|ZP_21155574.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348007108|gb|EGY47450.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348008330|gb|EGY48606.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348657491|gb|EGY75080.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|365746183|gb|AEW77088.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443543109|gb|ELT53376.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443546545|gb|ELT56191.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|443548222|gb|ELT57518.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 322
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 182/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L G+LIAID+D ++V+ K
Sbjct: 15 VLLHETVDGLALKE---NGIYIDGTFGRGGHSRLILSQLSVNGKLIAIDRDPQAVAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+E+ I +K+ + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNTFSEILPICEKFGLVGKVDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++GISA++WLA +E ++ V++ +GEERFAK+IAK IV Y + RT
Sbjct: 132 RMDSSKGISAAEWLAQVSEQDLAWVLKTFGEERFAKRIAKVIVDYNKSAVQNGGEFLART 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ +YK+PATR+FQAIRIYIN EL L L+ L KGR+ VIS
Sbjct: 192 LQLAELITQAVPFKDKYKHPATRSFQAIRIYINAELDELENVLQSALSVLAPKGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKQFMRKQSQGEVIPKGLPL 279
>gi|422911236|ref|ZP_16945862.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-09]
gi|424660903|ref|ZP_18098150.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-16]
gi|341632042|gb|EGS56916.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-09]
gi|408049965|gb|EKG85145.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-16]
Length = 316
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 190/291 (65%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S+WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSEWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|351730459|ref|ZP_08948150.1| 16S rRNA m(4)C1402 methyltranserfase [Acidovorax radicis N35]
Length = 308
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 178/282 (63%), Gaps = 12/282 (4%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ LNEA++ L G ++DATFG+GGHS IL RLG +GRL+A DKD E+++
Sbjct: 10 VLLNEAVDSLLGGAGPEPAGTWVDATFGRGGHSRLILLRLGPQGRLVAFDKDPEAIAEAT 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L G+L DLG+SS QI++ RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHL----ADLPAGSAAGVLMDLGVSSPQIDSPERGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVE 404
RMD TRG S + WLA A I +VI+DYGEERFA IAK IV R P++ T +L +
Sbjct: 126 RMDTTRGESVADWLATAEVGQIAEVIRDYGEERFAGPIAKAIVARREERGPLSTTSELAD 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ L GR+VVISFHSLE
Sbjct: 186 LVAGTVKTREPGQNPATRTFQALRIFINAELEELQQALEASLSVLQPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA--RCKP 504
DRIVK FI ++K + DRR P + MK +A R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP---FAAPQAMKLVALDRIKP 283
>gi|269104116|ref|ZP_06156813.1| S-adenosyl-methyltransferase MraW [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268164014|gb|EEZ42510.1| S-adenosyl-methyltransferase MraW [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 315
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 183/265 (69%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+++ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLHESVDGLAI---KPDGIYIDGTFGRGGHSRLILSKLGENGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ ++ +++ + I ++DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFNIIHGPFSGMEKYMEERDLIGRVDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT---PITRTKQL 402
RMD T G +AS+WLA A +I V++++GEERFAK+IA+ IV +R P+TRT QL
Sbjct: 127 RMDPTSGQAASEWLATADASDIAWVLKEFGEERFAKRIARGIVEHREDPEKEPLTRTLQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I + ++K+PATR+FQAIRIYIN EL ++ AL L GR+ VISFHS
Sbjct: 187 ANLIAQVSPFKDKHKHPATRSFQAIRIYINSELDEIATALNGAVNILAPGGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDR+VK F+ +K P I LP+
Sbjct: 247 LEDRMVKRFMRNKSKGPEIPAGLPL 271
>gi|299533126|ref|ZP_07046511.1| S-adenosyl-methyltransferase MraW [Comamonas testosteroni S44]
gi|298718903|gb|EFI59875.1| S-adenosyl-methyltransferase MraW [Comamonas testosteroni S44]
Length = 309
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/284 (48%), Positives = 184/284 (64%), Gaps = 16/284 (5%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L+EA++ L + G ++DATFG+GGHS IL+RLG GRLIA DKD ++++
Sbjct: 10 VLLDEAVDALLGGAAKPPAGQWVDATFGRGGHSRLILQRLGPDGRLIAFDKDPDAIAEAA 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L + + + G+L DLG+SS QI+N RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHLGELPEG----SVQGVLMDLGVSSPQIDNPDRGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQLVE 404
RMD TRG S ++WL +A I +VI+DYGEERFA IAK IV R S P+ T +L +
Sbjct: 126 RMDTTRGQSVAEWLEDAEVQQIAEVIRDYGEERFAGPIAKAIVARRESQGPLRTTAELAQ 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ + L GR+ VISFHSLE
Sbjct: 186 LVAGAVKTREAGQNPATRTFQALRIFINAELQELEQALEASLRVLAPGGRLAVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
DRIVK FI ++K + DRR P F P ++K L R KP
Sbjct: 246 DRIVKQFIAKHSKEIY-DRRAP-----FAPPTPMRLKALERIKP 283
>gi|421745611|ref|ZP_16183458.1| putative metal-binding protein [Cupriavidus necator HPC(L)]
gi|409775890|gb|EKN57332.1| putative metal-binding protein [Cupriavidus necator HPC(L)]
Length = 248
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +Y+DYCPNGLQV+GR + IVTGVTAS+ L+ A++ ADAILVHHGYFW+GE++
Sbjct: 14 LEVPRYKDYCPNGLQVQGRPEVTHIVTGVTASVALLDAAIEAGADAILVHHGYFWRGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
++G K RL +L+++ NL AYHLPLD HP+LGNNAQL + L + T RF + +GW G
Sbjct: 74 RVIGQKHGRLRRLLVSDTNLLAYHLPLDGHPELGNNAQLGRELGLNPTGRFGDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + +T++ L HI +G++P+ IGD ++ + +GWCTG AQ AI
Sbjct: 134 TL--------PQSMTLRMLADHIAGVLGREPLAIGDPDQPVRTVGWCTGGAQGYFDGAIA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV Y+SGE+SE T +++RESGV Y AAGHHATERY
Sbjct: 186 AGVDVYLSGEVSEQTTHLARESGVGYIAAGHHATERY 222
>gi|312885181|ref|ZP_07744860.1| S-adenosyl-methyltransferase MraW [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367121|gb|EFP94694.1| S-adenosyl-methyltransferase MraW [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 316
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/266 (48%), Positives = 181/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L+I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLSI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAKK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + + Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IQDPRFSIIHGPFSGIADYAETYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT---PITRTKQL 402
RMD + GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPSSGIPVSQWLLEAELDDITWVIREFGEDKHARRIAKSIVAYRENADNPPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I +S + K K+PATR FQA RIYIN EL + ALK L KGR+ VISFH
Sbjct: 187 AKLISESAPKSFKEKKHPATRAFQAFRIYINSELDEIDTALKGAVNILATKGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK+FI +K P + +P+
Sbjct: 247 SLEDRMVKHFIRKESKGPQVPHGIPL 272
>gi|254515249|ref|ZP_05127310.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium NOR5-3]
gi|219677492|gb|EED33857.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium NOR5-3]
Length = 308
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 183/286 (63%), Gaps = 5/286 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L G+Y+D TFG+GGHS +IL+RL GRL A DKD E+ +
Sbjct: 8 VLLHEAVDSLVSSP---AGLYVDGTFGRGGHSREILKRLNDDGRLFACDKDEEAERDALE 64
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFS F L +L ++ + + GIL DLG+SS Q++ RGFSF DGPLD
Sbjct: 65 LAGEDGRFSFARGSFAALPALLAQHGLGPVHGILLDLGVSSPQLDQAERGFSFQHDGPLD 124
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ W+A+A+E I V+++YGEERFA++IA IV R+ TP+TRT QL
Sbjct: 125 MRMDRSRGESAADWIASASEQEIIDVLREYGEERFARRIAGAIVRARAETPLTRTSQLAA 184
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ ++ +++K+PATR FQAIRI +N+EL +L+ L + L + GR+VVISFHSLE
Sbjct: 185 IVSEAHPRWEKHKHPATRAFQAIRIRVNRELDDLAELLSVALSVLAVGGRLVVISFHSLE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNI 510
DR+VK + ++ P + R LP+ + +M+ L + + K +
Sbjct: 245 DRLVKRHLRDMSRGPQLPRNLPVRDVESGAQMRLLGKAQRASKEEV 290
>gi|261493507|ref|ZP_05990029.1| S-adenosylmethionine-dependent methyltransferase [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261495860|ref|ZP_05992292.1| S-adenosylmethionine-dependent methyltransferase [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261308487|gb|EEY09758.1| S-adenosylmethionine-dependent methyltransferase [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261310840|gb|EEY12021.1| S-adenosylmethionine-dependent methyltransferase [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 312
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 180/264 (68%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +LG+ GRLIA D+D +++
Sbjct: 10 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLGENGRLIATDRDPRAIAEAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D RF I H F+ + + ++ + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 67 ISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD T+G+SA++WLA + ++ V++++GEERFAK+IA+ +V Y I+RT QL
Sbjct: 127 RMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERFAKRIAQAVVSYNKSANEKISRTLQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL L +GR+ +ISFHSL
Sbjct: 187 QIIADAVPFKDKHKHPATRSFQAIRIFINSELDELEKALNSALTVLAPEGRLSIISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ ++K + R LPI
Sbjct: 247 EDRMVKQFVRKHSKGMDVPRGLPI 270
>gi|52425730|ref|YP_088867.1| S-adenosyl-methyltransferase MraW [Mannheimia succiniciproducens
MBEL55E]
gi|115311583|sp|Q65RX8.1|RSMH_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|52307782|gb|AAU38282.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 322
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 183/268 (68%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L ++++ GIYID TFG+GGHS IL +L + GRLIAID+D +++ +
Sbjct: 15 VLLHEAVDGLALKDK---GIYIDGTFGRGGHSRLILSKLTENGRLIAIDRDPRAIAAAEE 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFHIEHNSFSAIPYICEKLGLVGKIDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD ++G+SA++WL TE ++ V++ +GEERFAK+IA IV+Y P+TRT
Sbjct: 132 RMDTSKGLSAAQWLQQVTEEDLAWVLKTFGEERFAKRIAHAIVNYNKSAVQNGTEPLTRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
L E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ VIS
Sbjct: 192 LPLAELIAQAVPFKDKHKHPATRSFQAIRIFINSELDELESVLHSALTVLAPEGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSKGESIPKGLPL 279
>gi|329118760|ref|ZP_08247458.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465107|gb|EGF11394.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
bacilliformis ATCC BAA-1200]
Length = 316
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 175/253 (69%), Gaps = 5/253 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L + + +G+Y+D TFG+GGHS IL LG GRL+ DKD ++V+ +
Sbjct: 11 VLLHEAVDALAVVS---DGVYVDGTFGRGGHSRLILSHLGANGRLVVFDKDPQAVAAARE 67
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D R S++H+ F+ L N+ +IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAAQDGRVSVVHDGFSCFQTALDALNVGQIDGALFDLGISSPQIDDGSRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG+SA++WLA A E I +VI++YGEERFA++IA+ IV R PI T +L +
Sbjct: 128 MRMDTTRGMSAAEWLAAADEDEICEVIRNYGEERFARQIARAIVAQRGTNPIDTTGKLAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+ +++R +R ++PATRTFQA+RI+IN+EL+ ++ AL +L GR+ VISFHSLE
Sbjct: 188 VAAQNVRTRERGQDPATRTFQAVRIFINRELEEIAAALPQAAGRLKSGGRLAVISFHSLE 247
Query: 465 DRIVKNFINFNTK 477
DRIVK F +++
Sbjct: 248 DRIVKQFFRRHSE 260
>gi|153802806|ref|ZP_01957392.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|254226626|ref|ZP_04920206.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|124121671|gb|EAY40414.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|125620845|gb|EAZ49199.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 316
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|422349884|ref|ZP_16430772.1| S-adenosyl-methyltransferase MraW [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657733|gb|EKB30615.1| S-adenosyl-methyltransferase MraW [Sutterella wadsworthensis
2_1_59BFAA]
Length = 323
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 175/268 (65%), Gaps = 6/268 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
+G+Y+D TFG+GGHS +ILE+L KGRLIA D+D ++V + TD RF+IIH F+ +
Sbjct: 24 DGLYVDGTFGRGGHSRRILEKLSPKGRLIAFDRDPQAVEVARSWTDPRFTIIHEPFSTMT 83
Query: 304 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
L + + DGI D+G+SS QI++ RGFSF DGPLDMRMD TRG++A++WLA A
Sbjct: 84 ESLAAIGVHQADGIFLDIGVSSPQIDDAARGFSFRFDGPLDMRMDTTRGMTAAEWLAQAE 143
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRY--KNPAT 421
E +++ VI YGEERFA IA+ IV R P+ T++L +++ + N++ ++PAT
Sbjct: 144 ERDLRHVISLYGEERFAGPIARAIVARRKTKPLETTRELADLVAGVVPRNRKDMGQHPAT 203
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPH- 480
RTFQA+RI +N EL L AL L +GR+ VI+FHSLEDRIVK+F +
Sbjct: 204 RTFQAVRIEVNHELDELKQALDAAGGLLKPEGRLAVITFHSLEDRIVKHFFDRAAHPERG 263
Query: 481 IDRRLPIYNYLFEPKMKF--LARCKPKK 506
+D RLP+ N + PK F + R KP +
Sbjct: 264 LDPRLPLTNDML-PKPLFDNIERIKPSE 290
>gi|407937462|ref|YP_006853103.1| 16S rRNA m(4)C1402 methyltransferase [Acidovorax sp. KKS102]
gi|407895256|gb|AFU44465.1| 16S rRNA m(4)C1402 methyltransferase [Acidovorax sp. KKS102]
Length = 308
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 12/282 (4%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ LNEA++ L +G ++DATFG+GGHS IL RLG +GRL+A DKD E+++
Sbjct: 10 VLLNEAVDSLLGGAGPEPSGTWVDATFGRGGHSRLILLRLGPQGRLVAFDKDPEAIAEAT 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L G+L DLG+SS QI++ RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHEGFRHL----ADLPPASAAGVLMDLGVSSPQIDSPERGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVE 404
RMD TRG S + WLA A I +VI+DYGEERFA IAK IV R P+ T +L +
Sbjct: 126 RMDTTRGESVADWLATAEVGQIAEVIRDYGEERFAGPIAKAIVARREERGPLATTAELAD 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ + +NPATRTFQA+RI+IN EL+ L AL+ L GR+VVISFHSLE
Sbjct: 186 LVAGAVKTREPGQNPATRTFQALRIFINAELEELQQALEASLSVLQPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA--RCKP 504
DRIVK FI ++K + DRR P + M+ +A R KP
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP---FAAPQAMRLIALDRIKP 283
>gi|240948415|ref|ZP_04752793.1| S-adenosyl-methyltransferase MraW [Actinobacillus minor NM305]
gi|240297241|gb|EER47799.1| S-adenosyl-methyltransferase MraW [Actinobacillus minor NM305]
Length = 314
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 182/264 (68%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ +
Sbjct: 11 VLLHEAVEGLAI---KPNGIYIDGTFGRGGHSRLILSKLNEQGRLIATDRDPRAIAEAHT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF IIH F+ + + + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFQIIHTAFSAIPQVCEDLDLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR--SITPITRTKQLV 403
RMD ++G+SA++WL + ++ V++++GEERFAK+IA IV++ S ITRT QL
Sbjct: 128 RMDTSKGLSAAEWLDQVSIEDLTWVLKEFGEERFAKRIATAIVNFNKTSSQKITRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL L +GR+ +ISFHSL
Sbjct: 188 QIISDAVPFKDKHKHPATRSFQAIRIFINSELDELEKALNSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + R LPI
Sbjct: 248 EDRMVKQFMKKNSKGKEVPRGLPI 271
>gi|119773487|ref|YP_926227.1| S-adenosyl-methyltransferase MraW [Shewanella amazonensis SB2B]
gi|262826482|sp|A1S2F1.1|RSMH_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|119765987|gb|ABL98557.1| methyltransferase [Shewanella amazonensis SB2B]
Length = 313
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 178/263 (67%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E ++ LNI R +GIYID TFG+GGHS ++L RLG GRLIAID+D +++ +
Sbjct: 10 VLLAETVDGLNI---RADGIYIDGTFGRGGHSREVLSRLGVDGRLIAIDRDPQAIKAAEQ 66
Query: 287 IT-DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
DSRF I+H F +L +++ + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FANDSRFQIVHGGFGQLANYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEER A+ IA+ I R TP TRTKQL +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEERNARHIARCIAADREKTPFTRTKQLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ K L GR+ +ISFHSLE
Sbjct: 187 LIARVAKSKERNKHPATRVFQAIRIYINSELEQIDQALEGALKVLAPHGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LP+
Sbjct: 247 DRIVKRFIRRHSQGEELPHGLPV 269
>gi|333901756|ref|YP_004475629.1| ribosomal RNA small subunit methyltransferase H [Pseudomonas fulva
12-X]
gi|333117021|gb|AEF23535.1| Ribosomal RNA small subunit methyltransferase H [Pseudomonas fulva
12-X]
Length = 313
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 185/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L+ R +G Y+D TFG+GGHS ILER+G GRL+ DKD +++ GN
Sbjct: 10 VLLEEAVAALS---PRADGCYVDGTFGRGGHSRLILERIGPGGRLLGFDKDPLAIATGNT 66
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL D + + ++ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDGRFVVVQRSFAELADELAVRGLAGQVSGILLDLGVSSPQLDDAERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++++A A E I +V ++YGEERFAK++A+ +V R P RT L
Sbjct: 127 DMRMDPSRGVSAAQFIATADEDEIARVFKEYGEERFAKRMARAVVARRQEQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RI++N EL +L L + L + GR+VVISFHSL
Sbjct: 187 QVLTVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALENLEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K + + R LPI FEP++K + + + + +K
Sbjct: 247 EDRIVKQFMRKHAKGEMDKLPRDLPIIPKAFEPRLKLIGKPQFASEAELK 296
>gi|422299956|ref|ZP_16387499.1| S-adenosyl-methyltransferase MraW [Pseudomonas avellanae BPIC 631]
gi|407987986|gb|EKG30646.1| S-adenosyl-methyltransferase MraW [Pseudomonas avellanae BPIC 631]
Length = 313
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILNHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSQAQELGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++ANA I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIANAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMESLEIGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIKIHGKAQ 288
>gi|419830845|ref|ZP_14354330.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-1A2]
gi|419834529|ref|ZP_14357984.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-61A2]
gi|422308340|ref|ZP_16395491.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1035(8)]
gi|422918241|ref|ZP_16952555.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-02A1]
gi|423823138|ref|ZP_17717146.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-55C2]
gi|423857102|ref|ZP_17720951.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-59A1]
gi|423884376|ref|ZP_17724543.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-60A1]
gi|423998662|ref|ZP_17741912.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-02C1]
gi|424017562|ref|ZP_17757388.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-55B2]
gi|424020482|ref|ZP_17760263.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-59B1]
gi|424625860|ref|ZP_18064319.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-50A1]
gi|424630347|ref|ZP_18068629.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-51A1]
gi|424634394|ref|ZP_18072492.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-52A1]
gi|424637472|ref|ZP_18075478.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-55A1]
gi|424641376|ref|ZP_18079256.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-56A1]
gi|424649446|ref|ZP_18087107.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-57A1]
gi|443528367|ref|ZP_21094404.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-78A1]
gi|341635576|gb|EGS60290.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-02A1]
gi|408011171|gb|EKG49002.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-50A1]
gi|408017250|gb|EKG54766.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-52A1]
gi|408022079|gb|EKG59306.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-56A1]
gi|408022592|gb|EKG59797.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-55A1]
gi|408031377|gb|EKG68005.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-57A1]
gi|408053419|gb|EKG88433.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-51A1]
gi|408617809|gb|EKK90914.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1035(8)]
gi|408620618|gb|EKK93630.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-1A2]
gi|408634411|gb|EKL06669.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-55C2]
gi|408639706|gb|EKL11513.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-59A1]
gi|408640026|gb|EKL11827.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-60A1]
gi|408649351|gb|EKL20668.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-61A2]
gi|408852208|gb|EKL92049.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-02C1]
gi|408859059|gb|EKL98728.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-55B2]
gi|408866680|gb|EKM06057.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-59B1]
gi|443453284|gb|ELT17114.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-78A1]
Length = 316
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|343503805|ref|ZP_08741611.1| S-adenosyl-methyltransferase MraW [Vibrio ichthyoenteri ATCC
700023]
gi|342813891|gb|EGU48848.1| S-adenosyl-methyltransferase MraW [Vibrio ichthyoenteri ATCC
700023]
Length = 316
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 182/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++YN + ++DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAERYNLVGQVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GIS S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGISVSQWLLEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI ++ P + LP+
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLPL 272
>gi|384425352|ref|YP_005634710.1| rRNA small subunit methyltransferase H [Vibrio cholerae LMA3984-4]
gi|327484905|gb|AEA79312.1| rRNA small subunit methyltransferase H [Vibrio cholerae LMA3984-4]
Length = 316
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|223041547|ref|ZP_03611748.1| S-adenosyl-methyltransferase MraW [Actinobacillus minor 202]
gi|223017642|gb|EEF16052.1| S-adenosyl-methyltransferase MraW [Actinobacillus minor 202]
Length = 314
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 181/264 (68%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I + NGIYID TFG+GGHS IL +L ++GRLIA D+D +++ +
Sbjct: 11 VLLHEAVEGLAI---KPNGIYIDGTFGRGGHSRLILSKLNEQGRLIATDRDPRAIAEAHT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF I+H F+ + + + I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ITDPRFQIVHTAFSAIPQVCEDLGLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD ++G+SA++WL + ++ V++++GEERFAK+IA IV++ + ITRT QL
Sbjct: 128 RMDTSKGLSAAEWLDQVSVEDLAWVLKEFGEERFAKRIATAIVNFNKTSGQKITRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL L +GR+ +ISFHSL
Sbjct: 188 QIISDAVPFKDKHKHPATRSFQAIRIFINSELDELEKALNSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ N+K + R LPI
Sbjct: 248 EDRMVKQFMKKNSKGKEVPRGLPI 271
>gi|254362469|ref|ZP_04978577.1| S-adenosylmethionine-dependent methyltransferase [Mannheimia
haemolytica PHL213]
gi|452745992|ref|ZP_21945824.1| 16S rRNA m(4)C1402 methyltransferase [Mannheimia haemolytica
serotype 6 str. H23]
gi|153094061|gb|EDN74973.1| S-adenosylmethionine-dependent methyltransferase [Mannheimia
haemolytica PHL213]
gi|452086131|gb|EME02522.1| 16S rRNA m(4)C1402 methyltransferase [Mannheimia haemolytica
serotype 6 str. H23]
Length = 312
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 180/264 (68%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +LG+ GRLIA D+D +++
Sbjct: 10 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLGENGRLIATDRDPRAIAEAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D RF I H F+ + + ++ + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 67 ISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD T+G+SA++WLA + ++ V++++GEERFAK+IA+ +V Y I+RT QL
Sbjct: 127 RMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERFAKRIAQAVVSYNKSANEKISRTLQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL L +GR+ +ISFHSL
Sbjct: 187 QIIADAVPFKDKHKHPATRSFQAIRIFINGELDELEKALNSALTVLAPEGRLSIISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ ++K + R LPI
Sbjct: 247 EDRMVKQFVRKHSKGMDVPRGLPI 270
>gi|339053510|ref|ZP_08648207.1| rRNA small subunit methyltransferase H [gamma proteobacterium
IMCC2047]
gi|330721283|gb|EGG99370.1| rRNA small subunit methyltransferase H [gamma proteobacterium
IMCC2047]
Length = 312
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 181/279 (64%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L ++ G Y+D TFG+GGHS IL RL KGRL+ IDKD ++++ ++
Sbjct: 10 VLLNEAVDALVVDP---GGCYVDGTFGRGGHSRAILSRLSSKGRLLVIDKDPQAIAYAHE 66
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKK-IDGILFDLGISSNQINNELRGFSFLLDGPL 343
D R I H F EL + + ++ + G+L DLG+SS Q+++ RGFSF DGPL
Sbjct: 67 HFGDDERVIIGHASFAELKDLAAAHGLENGVTGVLLDLGVSSPQLDDPERGFSFTQDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG SA++W+A A E I V+++YGEERFA+++AK IV R+ P TRT L
Sbjct: 127 DMRMDTSRGQSAAEWIAEAPEEEISTVLKEYGEERFARRMAKAIVAERAQRPFTRTAHLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I ++ ++ KNPATR FQ IRI+IN+EL +L++ L L KGR+VVISFHSL
Sbjct: 187 EVIKQANPAWEKGKNPATRAFQGIRIFINRELDDLALVLDQAVDLLADKGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK FI+ K + R LPI + ++K + +
Sbjct: 247 EDRIVKKFIHKQEKGEPLPRHLPIMQDQIDQRLKRVGKA 285
>gi|121728362|ref|ZP_01681391.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675217|ref|YP_001217911.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae O395]
gi|153214084|ref|ZP_01949218.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153826882|ref|ZP_01979549.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153830362|ref|ZP_01983029.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227118853|ref|YP_002820749.1| S-adenosyl-methyltransferase mraW [Vibrio cholerae O395]
gi|229521240|ref|ZP_04410660.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae TM 11079-80]
gi|229524395|ref|ZP_04413800.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae bv. albensis
VL426]
gi|229528604|ref|ZP_04417994.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae 12129(1)]
gi|262168390|ref|ZP_06036087.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae RC27]
gi|262190392|ref|ZP_06048652.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CT 5369-93]
gi|297581036|ref|ZP_06942961.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae RC385]
gi|417825629|ref|ZP_12472217.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE48]
gi|419838100|ref|ZP_14361538.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-46B1]
gi|421344721|ref|ZP_15795124.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-43B1]
gi|421355093|ref|ZP_15805425.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-45]
gi|423736061|ref|ZP_17709252.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-41B1]
gi|424010394|ref|ZP_17753328.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-44C1]
gi|424592107|ref|ZP_18031531.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1037(10)]
gi|429884941|ref|ZP_19366546.1| rRNA small subunit methyltransferase H [Vibrio cholerae PS15]
gi|121629353|gb|EAX61784.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124115510|gb|EAY34330.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|146317100|gb|ABQ21639.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|148874169|gb|EDL72304.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149739298|gb|EDM53554.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227014303|gb|ACP10513.1| S-adenosyl-methyltransferase mraW [Vibrio cholerae O395]
gi|229332378|gb|EEN97864.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae 12129(1)]
gi|229337976|gb|EEO02993.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae bv. albensis
VL426]
gi|229341772|gb|EEO06774.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae TM 11079-80]
gi|262023282|gb|EEY41986.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae RC27]
gi|262033732|gb|EEY52212.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CT 5369-93]
gi|297534862|gb|EFH73698.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae RC385]
gi|340047114|gb|EGR08044.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE48]
gi|395940801|gb|EJH51482.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-43B1]
gi|395954218|gb|EJH64831.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-45]
gi|408029862|gb|EKG66561.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1037(10)]
gi|408629144|gb|EKL01854.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-41B1]
gi|408856648|gb|EKL96343.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-46B1]
gi|408863137|gb|EKM02630.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-44C1]
gi|429228273|gb|EKY34201.1| rRNA small subunit methyltransferase H [Vibrio cholerae PS15]
Length = 316
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|261211507|ref|ZP_05925795.1| S-adenosyl-methyltransferase MraW [Vibrio sp. RC341]
gi|262404723|ref|ZP_06081278.1| S-adenosyl-methyltransferase MraW [Vibrio sp. RC586]
gi|260839462|gb|EEX66088.1| S-adenosyl-methyltransferase MraW [Vibrio sp. RC341]
gi|262349755|gb|EEY98893.1| S-adenosyl-methyltransferase MraW [Vibrio sp. RC586]
Length = 316
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 190/291 (65%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S+WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSEWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + +P+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQ 297
>gi|393759805|ref|ZP_10348617.1| 16S rRNA m(4)C1402 methyltransferase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161617|gb|EJC61679.1| 16S rRNA m(4)C1402 methyltransferase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 356
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 181/269 (67%), Gaps = 3/269 (1%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCF 299
+++G+Y+D TFG+GGHS +L L +GRLI IDKD +++++ ++ DSR +++H+ F
Sbjct: 36 QVDGVYVDCTFGRGGHSRLLLSHLSPQGRLIVIDKDPQAIAVAQELAAQDSRVTVVHSGF 95
Query: 300 TELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWL 359
+L L + + + G++ DLGISS QI++ RGFSF+ +GPLDMRMD + G++A +WL
Sbjct: 96 GDLAQALDELDAGPLQGVMMDLGISSPQIDDAQRGFSFMREGPLDMRMDTSGGLTAEQWL 155
Query: 360 ANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNP 419
A+ + ++K+VI +YGEERFA +IAK IV R P+ T+ L E++ +R ++ ++P
Sbjct: 156 ADVSVEDLKEVIAEYGEERFAFQIAKAIVDRRQSRPLHTTRDLAELVAGVVRTREKGQHP 215
Query: 420 ATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIP 479
ATRTFQAIRIY+N+EL+ L+ AL +L GR+ VI+FHSLEDR+VK F+N +
Sbjct: 216 ATRTFQAIRIYLNRELEELAHALPSILSRLATGGRLAVIAFHSLEDRMVKQFMNAAARPA 275
Query: 480 HIDRRLPIYNY-LFEPKMKFLARCKPKKK 507
RLPI L +P ++ L R P +
Sbjct: 276 QEQSRLPILEKDLPQPLVQSLGRILPTDE 304
>gi|419801721|ref|ZP_14326935.1| S-adenosyl-methyltransferase MraW [Haemophilus parainfluenzae
HK262]
gi|385193100|gb|EIF40481.1| S-adenosyl-methyltransferase MraW [Haemophilus parainfluenzae
HK262]
Length = 322
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 182/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L + GRLIA+D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSQLSENGRLIAVDRDPRAIAEAEK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I +K + + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNSFSHIPDICQKLDLVGKIDGILLDLGVSSPQLDEAARGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY--RSITP----ITRT 399
RMD T+G+SA++WL + ++ V++ +GEERFAK+IA IV + R++ ++RT
Sbjct: 132 RMDTTQGLSAAEWLKQVSVDDLTWVLKTFGEERFAKRIATAIVEFNKRAVKNGTECLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +S+ ++K+PATR+FQAIRIYIN EL L L L +GR+ +IS
Sbjct: 192 SQLAELIAQSVPFKDKHKHPATRSFQAIRIYINAELDELESVLNSALDMLASEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I R LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPRGLPL 279
>gi|237747245|ref|ZP_04577725.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378596|gb|EEO28687.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 255
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 165/229 (72%), Gaps = 11/229 (4%)
Query: 496 MKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAIL 555
+KFLA L I DYCPNGLQVEG+S I+ +V+GVTASL LI+ A+++NAD +L
Sbjct: 12 IKFLADV-----LKISLIRDYCPNGLQVEGKSRISSVVSGVTASLALIEAAIELNADTLL 66
Query: 556 VHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCT 615
VHHGYFW+ EN I G K+KR+++L+ + INL AYHLPLD HP+LGNN QLAK+LNF T
Sbjct: 67 VHHGYFWRNENECITGPKQKRIKKLLTHDINLLAYHLPLDCHPELGNNVQLAKLLNFGTT 126
Query: 616 RRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCT 675
RF +N +GW+GK + +I+T+ +L I K+G+KP+VIG+ KK+ IGWC+
Sbjct: 127 GRFGENELGWLGKAAD------PEIVTVANLAKLIETKLGRKPLVIGNPAKKLGNIGWCS 180
Query: 676 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GAAQ+LL A G TAY+SGEISE TV+ + E +AY A GHHATER+
Sbjct: 181 GAAQDLLPAAAQAGATAYLSGEISERTVHEALEYDIAYLACGHHATERF 229
>gi|146281460|ref|YP_001171613.1| S-adenosyl-methyltransferase MraW [Pseudomonas stutzeri A1501]
gi|145569665|gb|ABP78771.1| S-adenosyl-methyltransferase MraW [Pseudomonas stutzeri A1501]
Length = 293
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 178/275 (64%), Gaps = 5/275 (1%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCF 299
R +G Y+D TFG+GGHS +L++LG G+L+ DKD +++ G + D RF ++ F
Sbjct: 2 RADGRYLDGTFGRGGHSRLLLQQLGPNGQLLGFDKDPLAIATGQALAAEDGRFVVVQRSF 61
Query: 300 TEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKW 358
EL D + ++ + GIL DLG+SS Q+++ +RGFSFL DGPLDMRMD +RG+SA++W
Sbjct: 62 AELGDEVAQRGWTGAVSGILLDLGVSSPQLDDPIRGFSFLNDGPLDMRMDPSRGVSAAEW 121
Query: 359 LANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKN 418
+A+A E I +V +DYGEERFAK++A+ +V R+ P RT L +++ + ++ K+
Sbjct: 122 IASADEDEIARVFKDYGEERFAKRMARAVVQRRAEAPFERTADLAKVLTDANPAWEKGKS 181
Query: 419 PATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTK- 477
PATR FQ +RI+IN EL +L L L + GR+VVISFHSLEDRIVK F+ + K
Sbjct: 182 PATRAFQGLRIHINNELGDLERGLDAALDALEVGGRLVVISFHSLEDRIVKQFMRRHAKG 241
Query: 478 -IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
+ R LPI FEP++K + + + + +K
Sbjct: 242 EADKLPRDLPIIPKAFEPRLKLIGKPQYASEAEVK 276
>gi|381153311|ref|ZP_09865180.1| S-adenosyl-methyltransferase MraW [Methylomicrobium album BG8]
gi|380885283|gb|EIC31160.1| S-adenosyl-methyltransferase MraW [Methylomicrobium album BG8]
Length = 302
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 181/270 (67%), Gaps = 7/270 (2%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV---SLG 284
L EA+ L I+ + GIY+D TFG+GGHS IL+RL GRL+AID+D +++ +
Sbjct: 1 MLEEALEQLAIKRQ---GIYLDCTFGRGGHSRAILQRLDTNGRLLAIDRDPDAIKSEAAQ 57
Query: 285 NKITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ + D+RF + H CF+EL I+ + + +IDGIL DLG+SS Q+++ RGFSF+ +GPL
Sbjct: 58 HLLRDNRFQLFHGCFSELAEIVGREGLNGRIDGILLDLGVSSPQLDDPERGFSFMKNGPL 117
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G+SA+ WLA+ +E + +V+ +YGEER+A++IAK IV R++ PI T+ L
Sbjct: 118 DMRMNSAAGLSAADWLASVSEKELVRVLFEYGEERYARRIAKAIVTRRTVGPIGTTRHLA 177
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I ++ +++K+PATRTFQAIRI IN EL L AL+ + L GR+ VISFHSL
Sbjct: 178 ELIAEAAPATEKHKHPATRTFQAIRIEINHELDELQKALQQAVEVLKPGGRLAVISFHSL 237
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
EDRIVK FI + H +LPI E
Sbjct: 238 EDRIVKRFIRSESGSKHDPGKLPIRESEIE 267
>gi|74316129|ref|YP_313869.1| methyltransferase [Thiobacillus denitrificans ATCC 25259]
gi|88909225|sp|Q3SMI1.1|RSMH_THIDA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|74055624|gb|AAZ96064.1| methyltransferase [Thiobacillus denitrificans ATCC 25259]
Length = 311
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 177/278 (63%), Gaps = 4/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ EA+ L I+ E G+Y+DATFG+GGHS IL RLG GRL+A+D+D +++ G
Sbjct: 8 VLAQEAVAALAIKPE---GVYVDATFGRGGHSRMILARLGTLGRLVALDRDPAAIAAGAA 64
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D R ++ + F+ L +L I ++DGIL D+G+SS Q+++ RGFSF D PLDMR
Sbjct: 65 LDDPRLTLRQSEFSRLGKVLDALGIARVDGILLDIGVSSPQLDDAARGFSFRFDAPLDMR 124
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD GISA+ WLA A E I +VI+ YGEERFAK IA+ +V R IT T QL II
Sbjct: 125 MDPGSGISAADWLATAEEEEISEVIRTYGEERFAKPIARALVAARQKEAITSTAQLAGII 184
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
+++ + ++PATR+FQAIRIY+N+EL+ L L ++L GR+ VISFHSLEDR
Sbjct: 185 AAAVKKREPGQHPATRSFQAIRIYLNRELEELKAVLPQCVERLRAGGRLAVISFHSLEDR 244
Query: 467 IVKNFINFNTKIPHIDRRLPIYNYLFEP-KMKFLARCK 503
IVK F+ + RLPI + + +++ + R +
Sbjct: 245 IVKRFLRTESLGEQAPPRLPIPAAMLKAGRLRLVGRAQ 282
>gi|375107706|ref|ZP_09753967.1| S-adenosyl-methyltransferase MraW [Burkholderiales bacterium
JOSHI_001]
gi|374668437|gb|EHR73222.1| S-adenosyl-methyltransferase MraW [Burkholderiales bacterium
JOSHI_001]
Length = 315
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 182/287 (63%), Gaps = 18/287 (6%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI + + +G+Y+D TFG+GGH+ +L RL GRLIA DKD ++++ +
Sbjct: 13 VLLNEAIEAIATQP---DGVYVDGTFGRGGHARALLARLSPVGRLIAFDKDPDAIAAATQ 69
Query: 287 ----ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
I D RF+I+H F ++ L + + ++ G+L DLG+SS QI+N RGFSF D P
Sbjct: 70 GPDAINDPRFAIVHASFADMRTALAERGVAQVQGVLLDLGVSSPQIDNPERGFSFRYDAP 129
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQ 401
LDMRMD TRG +A+ +LA A E I +VI+D+GEERFA IAK +V R S + T +
Sbjct: 130 LDMRMDTTRGETAADFLARADEKRIAEVIRDHGEERFAVPIAKALVARRESGRAVRSTAE 189
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
L E++ +++ + +NPATRTFQA+RI +N EL++L L + L +GR+VVISFH
Sbjct: 190 LSEVVAGAVKTREPGQNPATRTFQALRILVNAELEDLGQGLAAALEVLAPQGRLVVISFH 249
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
SLEDRIVK FI ++ +DRR P F P ++ +AR KP
Sbjct: 250 SLEDRIVKTFIARESRS-EVDRRAP-----FAPPKPTRLVSVARVKP 290
>gi|258625131|ref|ZP_05720048.1| S-adenosyl-methyltransferase mraW [Vibrio mimicus VM603]
gi|262166452|ref|ZP_06034189.1| S-adenosyl-methyltransferase MraW [Vibrio mimicus VM223]
gi|262170644|ref|ZP_06038322.1| S-adenosyl-methyltransferase MraW [Vibrio mimicus MB-451]
gi|449143739|ref|ZP_21774562.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio mimicus CAIM 602]
gi|258582582|gb|EEW07414.1| S-adenosyl-methyltransferase mraW [Vibrio mimicus VM603]
gi|261891720|gb|EEY37706.1| S-adenosyl-methyltransferase MraW [Vibrio mimicus MB-451]
gi|262026168|gb|EEY44836.1| S-adenosyl-methyltransferase MraW [Vibrio mimicus VM223]
gi|449080737|gb|EMB51648.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio mimicus CAIM 602]
Length = 316
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + +P+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQ 297
>gi|260773502|ref|ZP_05882418.1| S-adenosyl-methyltransferase MraW [Vibrio metschnikovii CIP 69.14]
gi|260612641|gb|EEX37844.1| S-adenosyl-methyltransferase MraW [Vibrio metschnikovii CIP 69.14]
Length = 316
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 192/282 (68%), Gaps = 12/282 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ +K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEASK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++YN++ ++DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAQRYNLQGQVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT---PITRTKQL 402
RMD G+S ++WL A +I VI+++GE++ A++IAK IV +R P+TRT QL
Sbjct: 127 RMDPNSGVSVAQWLLTAELDDITWVIREFGEDKHARRIAKAIVAHRDNPDNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATRTFQA RIYIN EL+ + IAL+ L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRTFQAFRIYINSELEEIDIALQGAASILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
SLEDR+VK FI +K P + LP L + ++K L K
Sbjct: 247 SLEDRMVKRFIRKESKGPDVPHGLP----LTQDQIKALGSAK 284
>gi|431804319|ref|YP_007231222.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida HB3267]
gi|430795084|gb|AGA75279.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida HB3267]
Length = 315
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 183/282 (64%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLDGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A E I +V ++YGEERFAK++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPEEEIARVFKEYGEERFAKRMARAVVQRREQQPFTRTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAIDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ K ++ R LP+ + +FEPK+K + + +
Sbjct: 249 EDRIVKLFMRRLAKGEADNLPRNLPVQHKVFEPKIKLIGKAQ 290
>gi|445176188|ref|ZP_21397506.1| 16S rRNA m(4)C1402 methyltransferase, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444857073|gb|ELX82088.1| 16S rRNA m(4)C1402 methyltransferase, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
Length = 281
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 166/238 (69%), Gaps = 1/238 (0%)
Query: 253 GQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL-DIILKKYNI 311
G+GGHS IL +LG++GRL+AID+D +++++ I D RFSIIH F+ L D + ++
Sbjct: 1 GRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQTINDPRFSIIHGPFSALADYVAERELT 60
Query: 312 KKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVI 371
KIDGIL DLG+SS Q+++ RGFSF+ DGPLDMRMD TRG SA++WL A E +I V+
Sbjct: 61 GKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVL 120
Query: 372 QDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYI 431
+ +GEERFAK+IA+ IV P+TRTK+L E++ + ++K+PATRTFQA+RI++
Sbjct: 121 KTFGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWV 180
Query: 432 NQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
N EL+ + ALK L GR+ +ISFHSLEDRIVK F+ ++ P + LP+
Sbjct: 181 NSELEEIEQALKSSLSVLAPGGRLSIISFHSLEDRIVKRFMREQSRGPQVPAGLPMTE 238
>gi|91786965|ref|YP_547917.1| S-adenosyl-methyltransferase MraW [Polaromonas sp. JS666]
gi|123060224|sp|Q12EM3.1|RSMH_POLSJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|91696190|gb|ABE43019.1| methyltransferase [Polaromonas sp. JS666]
Length = 305
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 183/282 (64%), Gaps = 10/282 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI L+I +G YIDATFG+GGHS +L +L +GRL A DKD ++++
Sbjct: 10 VLLNEAIAALHINP---DGHYIDATFGRGGHSRLLLSQLSPQGRLTAFDKDLDAIAEAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
ITD RFSI H F + L + G+L DLG+SS QI+N +RGFSF +GPLDMR
Sbjct: 67 ITDPRFSIRHEGF----MHLGQLPAASAAGVLMDLGVSSPQIDNPVRGFSFRSEGPLDMR 122
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEI 405
MD TRG S ++WLA+A+ + +VI++YGEERFA+++AK I R P+ T +L E+
Sbjct: 123 MDTTRGQSVAEWLADASIETMAEVIREYGEERFAQQVAKAIDRRRQERGPLRTTAELAEV 182
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + K+PATRTFQA+RI+IN EL+ L AL+ K L GR+VVISFHSLED
Sbjct: 183 VAGAVKTREPGKDPATRTFQALRIFINAELEELQQALEASLKVLQPGGRLVVISFHSLED 242
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKK 507
RIVK FI ++ DRR P + ++K L R KP ++
Sbjct: 243 RIVKQFIAGQSR-EVFDRRAP-FAAPKAMRLKALGRIKPSEE 282
>gi|56476234|ref|YP_157823.1| S-adenosyl-methyltransferase MraW [Aromatoleum aromaticum EbN1]
gi|68565443|sp|Q5P6Y9.1|RSMH_AZOSE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|56312277|emb|CAI06922.1| S-adenosyl-methyltransferase mraW [Aromatoleum aromaticum EbN1]
Length = 312
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 180/278 (64%), Gaps = 4/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I R G+Y+D TFG+GGHS IL +L GRLIA D+D ++ +
Sbjct: 10 VLLAEAVEALAI---RPGGVYVDGTFGRGGHSRAILAKLDADGRLIAFDRDPRAIEVARA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
+ D R + +H F+ L + ++ +DG+L DLG+SS Q++ RG SF D PLDMR
Sbjct: 67 LPDPRLTAVHAPFSAFAEELDRLGLEHVDGVLLDLGVSSPQLDEAARGMSFRFDAPLDMR 126
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII 406
MD +RG + ++WLA+A+ I +V++DYGEERFA IAK I R+ + T+QL EI+
Sbjct: 127 MDTSRGQTVAQWLADASVAQITEVLRDYGEERFAYAIAKAIAAARAGGAVASTRQLAEIV 186
Query: 407 LKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466
K++R + ++PATR+FQA+RI+INQEL+ LS+ L ++L GR+V ISFHSLEDR
Sbjct: 187 EKAVRTREPGQHPATRSFQALRIFINQELEELSLVLPAAVERLKPGGRLVAISFHSLEDR 246
Query: 467 IVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCK 503
IVK F+ ++ P + RLP+ L +P+++ + + +
Sbjct: 247 IVKRFMRDESRPPQLPSRLPLRAAELPQPRLRLVGKSQ 284
>gi|339489249|ref|YP_004703777.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida S16]
gi|338840092|gb|AEJ14897.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida S16]
Length = 315
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 183/282 (64%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLDGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A E I +V ++YGEERFAK++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPEEEIARVFKEYGEERFAKRMARAVVQRREQQPFTRTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAIDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LP+ + +FEPK+K + + +
Sbjct: 249 EDRIVKLFMRKLAKGEADNLPRNLPVQHKVFEPKIKLIGKAQ 290
>gi|15642406|ref|NP_232039.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121587636|ref|ZP_01677400.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153818411|ref|ZP_01971078.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153822223|ref|ZP_01974890.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227082532|ref|YP_002811083.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae M66-2]
gi|229507529|ref|ZP_04397034.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae BX 330286]
gi|229512275|ref|ZP_04401754.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae B33]
gi|229519411|ref|ZP_04408854.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae RC9]
gi|229607035|ref|YP_002877683.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae MJ-1236]
gi|254849531|ref|ZP_05238881.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Vibrio
cholerae MO10]
gi|255746918|ref|ZP_05420863.1| S-adenosyl-methyltransferase MraW [Vibrio cholera CIRS 101]
gi|262161539|ref|ZP_06030649.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae INDRE 91/1]
gi|298500231|ref|ZP_07010036.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae MAK 757]
gi|360036283|ref|YP_004938046.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742198|ref|YP_005334167.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio cholerae IEC224]
gi|417814425|ref|ZP_12461078.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-49A2]
gi|417818166|ref|ZP_12464794.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HCUF01]
gi|418335410|ref|ZP_12944319.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-06A1]
gi|418339373|ref|ZP_12948263.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-23A1]
gi|418346945|ref|ZP_12951698.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-28A1]
gi|418350702|ref|ZP_12955433.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-43A1]
gi|418355662|ref|ZP_12958381.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-61A1]
gi|419827354|ref|ZP_14350853.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1033(6)]
gi|421318373|ref|ZP_15768941.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1032(5)]
gi|421322159|ref|ZP_15772711.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1038(11)]
gi|421325956|ref|ZP_15776480.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1041(14)]
gi|421329615|ref|ZP_15780125.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1042(15)]
gi|421333570|ref|ZP_15784047.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1046(19)]
gi|421337113|ref|ZP_15787574.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1048(21)]
gi|421340541|ref|ZP_15790973.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-20A2]
gi|421348240|ref|ZP_15798617.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-46A1]
gi|422897500|ref|ZP_16934939.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-40A1]
gi|422903698|ref|ZP_16938663.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-48A1]
gi|422907583|ref|ZP_16942376.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-70A1]
gi|422914423|ref|ZP_16948927.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HFU-02]
gi|422926627|ref|ZP_16959639.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-38A1]
gi|423145950|ref|ZP_17133543.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-19A1]
gi|423150626|ref|ZP_17137939.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-21A1]
gi|423154460|ref|ZP_17141624.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-22A1]
gi|423157528|ref|ZP_17144620.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-32A1]
gi|423161101|ref|ZP_17148039.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-33A2]
gi|423165929|ref|ZP_17152649.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-48B2]
gi|423731960|ref|ZP_17705261.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-17A1]
gi|423770803|ref|ZP_17713526.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-50A2]
gi|423896737|ref|ZP_17727569.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-62A1]
gi|423931940|ref|ZP_17731962.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-77A1]
gi|424003376|ref|ZP_17746450.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-17A2]
gi|424007169|ref|ZP_17750138.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-37A1]
gi|424025149|ref|ZP_17764798.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-62B1]
gi|424028035|ref|ZP_17767636.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-69A1]
gi|424587314|ref|ZP_18026892.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1030(3)]
gi|424595970|ref|ZP_18035288.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1040(13)]
gi|424599879|ref|ZP_18039057.1| S-adenosyl-methyltransferase MraW [Vibrio Cholerae CP1044(17)]
gi|424602640|ref|ZP_18041779.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1047(20)]
gi|424607574|ref|ZP_18046514.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1050(23)]
gi|424611392|ref|ZP_18050230.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-39A1]
gi|424614216|ref|ZP_18053000.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-41A1]
gi|424618185|ref|ZP_18056855.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-42A1]
gi|424622969|ref|ZP_18061472.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-47A1]
gi|424645929|ref|ZP_18083663.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-56A2]
gi|424653699|ref|ZP_18091078.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-57A2]
gi|424657519|ref|ZP_18094803.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-81A2]
gi|440710635|ref|ZP_20891283.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae 4260B]
gi|443504749|ref|ZP_21071701.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-64A1]
gi|443508655|ref|ZP_21075410.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-65A1]
gi|443512493|ref|ZP_21079126.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-67A1]
gi|443516052|ref|ZP_21082557.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-68A1]
gi|443519843|ref|ZP_21086231.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-71A1]
gi|443524739|ref|ZP_21090942.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-72A2]
gi|443532323|ref|ZP_21098337.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-7A1]
gi|443536136|ref|ZP_21102003.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-80A1]
gi|443539665|ref|ZP_21105518.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-81A1]
gi|449055150|ref|ZP_21733818.1| rRNA small subunit methyltransferase H [Vibrio cholerae O1 str.
Inaba G4222]
gi|20139220|sp|Q9KPF9.1|RSMH_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263504940|sp|C3LQV4.1|RSMH_VIBCM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|9656982|gb|AAF95552.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548146|gb|EAX58219.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126511044|gb|EAZ73638.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520233|gb|EAZ77456.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227010420|gb|ACP06632.1| S-adenosyl-methyltransferase mraW [Vibrio cholerae M66-2]
gi|229344100|gb|EEO09075.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae RC9]
gi|229352240|gb|EEO17181.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae B33]
gi|229355034|gb|EEO19955.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae BX 330286]
gi|229369690|gb|ACQ60113.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae MJ-1236]
gi|254845236|gb|EET23650.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Vibrio
cholerae MO10]
gi|255735320|gb|EET90720.1| S-adenosyl-methyltransferase MraW [Vibrio cholera CIRS 101]
gi|262028850|gb|EEY47504.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae INDRE 91/1]
gi|297540924|gb|EFH76978.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae MAK 757]
gi|340035762|gb|EGQ96740.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HCUF01]
gi|340036911|gb|EGQ97887.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-49A2]
gi|341619873|gb|EGS45660.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-70A1]
gi|341619981|gb|EGS45767.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-48A1]
gi|341620678|gb|EGS46444.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-40A1]
gi|341636235|gb|EGS60937.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HFU-02]
gi|341645628|gb|EGS69757.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-38A1]
gi|356416445|gb|EHH70076.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-06A1]
gi|356417303|gb|EHH70921.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-21A1]
gi|356422194|gb|EHH75677.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-19A1]
gi|356427665|gb|EHH80906.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-22A1]
gi|356428333|gb|EHH81560.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-23A1]
gi|356429473|gb|EHH82689.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-28A1]
gi|356438998|gb|EHH91998.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-32A1]
gi|356443594|gb|EHH96413.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-33A2]
gi|356445198|gb|EHH98007.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-43A1]
gi|356449653|gb|EHI02396.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-48B2]
gi|356452160|gb|EHI04839.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-61A1]
gi|356647437|gb|AET27492.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795708|gb|AFC59179.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio cholerae IEC224]
gi|395916631|gb|EJH27461.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1032(5)]
gi|395917794|gb|EJH28622.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1041(14)]
gi|395917899|gb|EJH28726.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1038(11)]
gi|395928149|gb|EJH38912.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1042(15)]
gi|395928972|gb|EJH39725.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1046(19)]
gi|395932212|gb|EJH42956.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1048(21)]
gi|395939824|gb|EJH50506.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-20A2]
gi|395942819|gb|EJH53495.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-46A1]
gi|395957766|gb|EJH68289.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-56A2]
gi|395958264|gb|EJH68762.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-57A2]
gi|395960912|gb|EJH71263.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-42A1]
gi|395970194|gb|EJH79992.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-47A1]
gi|395972119|gb|EJH81731.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1030(3)]
gi|395974606|gb|EJH84129.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1047(20)]
gi|408006246|gb|EKG44415.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-39A1]
gi|408011038|gb|EKG48875.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-41A1]
gi|408030698|gb|EKG67350.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1040(13)]
gi|408040715|gb|EKG76880.1| S-adenosyl-methyltransferase MraW [Vibrio Cholerae CP1044(17)]
gi|408041992|gb|EKG78068.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1050(23)]
gi|408051937|gb|EKG87006.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-81A2]
gi|408608144|gb|EKK81547.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae CP1033(6)]
gi|408622405|gb|EKK95389.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-17A1]
gi|408632930|gb|EKL05351.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-50A2]
gi|408653532|gb|EKL24694.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-77A1]
gi|408654025|gb|EKL25168.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-62A1]
gi|408844268|gb|EKL84400.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-37A1]
gi|408845025|gb|EKL85146.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-17A2]
gi|408869543|gb|EKM08839.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-62B1]
gi|408878311|gb|EKM17321.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-69A1]
gi|439973964|gb|ELP50168.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae 4260B]
gi|443430828|gb|ELS73386.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-64A1]
gi|443434658|gb|ELS80810.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-65A1]
gi|443438551|gb|ELS88271.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-67A1]
gi|443442588|gb|ELS95896.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-68A1]
gi|443446477|gb|ELT03141.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-71A1]
gi|443449192|gb|ELT09493.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-72A2]
gi|443457713|gb|ELT25110.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-7A1]
gi|443460639|gb|ELT31723.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-80A1]
gi|443464795|gb|ELT39456.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HC-81A1]
gi|448265192|gb|EMB02427.1| rRNA small subunit methyltransferase H [Vibrio cholerae O1 str.
Inaba G4222]
Length = 316
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + +P+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQ 297
>gi|251792015|ref|YP_003006735.1| S-adenosyl-methyltransferase MraW [Aggregatibacter aphrophilus
NJ8700]
gi|422336835|ref|ZP_16417807.1| ribosomal RNA small subunit methyltransferase H [Aggregatibacter
aphrophilus F0387]
gi|263446623|sp|C6AKG2.1|RSMH_AGGAN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|247533402|gb|ACS96648.1| S-adenosyl-methyltransferase MraW [Aggregatibacter aphrophilus
NJ8700]
gi|353345845|gb|EHB90134.1| ribosomal RNA small subunit methyltransferase H [Aggregatibacter
aphrophilus F0387]
Length = 322
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 181/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L G+LIAID+D ++V+ K
Sbjct: 15 VLLHETVDGLALKE---NGIYIDGTFGRGGHSRLILSKLSANGKLIAIDRDPKAVAEAQK 71
Query: 287 ITDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+E L I K+ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFQIEHNTFSEILSICEKRGLVGKIDGILLDLGVSSPQLDDAARGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++GISA++WL +E ++ V++ +GEERFAKKIAK IV+Y +TRT
Sbjct: 132 RMDDSKGISAAEWLQQVSEQDLAWVLKTFGEERFAKKIAKAIVNYNKSAVQNGSEFLTRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L L+ L GR+ VIS
Sbjct: 192 LQLAELIAHTVPFKDKHKHPATRSFQAIRIFINAELDELEKVLQSALTVLAPAGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSQGREIPKGLPL 279
>gi|421531169|ref|ZP_15977599.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida S11]
gi|402211394|gb|EJT82861.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida S11]
Length = 315
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 183/282 (64%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLDGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A E I +V ++YGEERFAK++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPEEEIARVFKEYGEERFAKRMARAVVQRREQQPFTRTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAAIDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LP+ + +FEPK+K + + +
Sbjct: 249 EDRIVKLFMRKLAKGEADNLPRNLPVQHKVFEPKIKLIGKAQ 290
>gi|323497887|ref|ZP_08102896.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio sinaloensis DSM 21326]
gi|323316932|gb|EGA69934.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio sinaloensis DSM 21326]
Length = 316
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/266 (48%), Positives = 181/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ NK
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEANK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + K Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMADYAKDYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLLEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPL 272
>gi|422590154|ref|ZP_16664811.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330877141|gb|EGH11290.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 313
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILNHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSQAQELGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIASAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMESLEIGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIKIHGKAQ 288
>gi|345877699|ref|ZP_08829439.1| S-adenosyl-methyltransferase mraW [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225302|gb|EGV51665.1| S-adenosyl-methyltransferase mraW [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 311
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 180/279 (64%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ LNI E GIYID TFG+GGHS +IL+ LG++GRLI IDKD +++ G +
Sbjct: 10 VLLEEAVTALNITAE---GIYIDGTFGRGGHSRRILKVLGERGRLIGIDKDPQAIVHGRE 66
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D+RF+I+ F + + + + ++DG+L DLG+SS Q++ RGFSFL DGPL
Sbjct: 67 QLGGDARFTIVQQSFAMIAQVAQNAGVAGRVDGVLLDLGVSSPQLDQAERGFSFLQDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD G+SA++WLA AT+ I V++ YG+ER A++IA+ IV R + PI T +L
Sbjct: 127 DMRMDPNSGMSAAQWLAAATDKEIADVLKRYGDERHARRIARAIVAARQVEPILTTGRLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ + ++ K+PATR+FQAIRI+IN+EL +L L + L GR+ VISFHSL
Sbjct: 187 EIVSAANPAWEKGKHPATRSFQAIRIFINRELDDLQQFLGQVLEVLRPGGRLAVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK F+ K +P+ +P++K L +
Sbjct: 247 EDRIVKRFMRDQAKGDRFPAGVPVTQAQLQPRLKLLGKA 285
>gi|422658101|ref|ZP_16720538.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331016726|gb|EGH96782.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 313
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILNHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSQAQELGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIASAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMESLEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIKIHGKAQ 288
>gi|422650966|ref|ZP_16713766.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964049|gb|EGH64309.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 313
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RPDGCYLDGTFGRGGHSRLILSHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSQAQELGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIASAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMESLEIGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIKIHGKAQ 288
>gi|444380303|ref|ZP_21179442.1| rRNA small subunit methyltransferase H [Enterovibrio sp. AK16]
gi|443675572|gb|ELT82295.1| rRNA small subunit methyltransferase H [Enterovibrio sp. AK16]
Length = 317
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 187/287 (65%), Gaps = 12/287 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L + + +GIY+D TFG+GGH+ +IL RLG G+L +ID+D +++
Sbjct: 10 VLLHESIEGLAL---KPDGIYVDGTFGRGGHTREILRRLGDGGQLYSIDRDPQAIEEAGT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFNIIHGPFSGIQQYIEERGLSGKIDGVLLDLGVSSPQLDDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI AS+WLA A +I V++++GEERFAK+IA+ IV +R + P+TRT QL
Sbjct: 127 RMDPTSGIPASQWLAEAEADDIAWVLKEFGEERFAKRIARAIVAHREDETKEPLTRTLQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I R K+PATR FQAIRIYIN EL+ + A++ + L GR+ +ISFHS
Sbjct: 187 ANLIAAVSPSRDRKKHPATRCFQAIRIYINSELEEIETAMQGALEVLAPGGRLSIISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KP 504
LEDR+VK F+ +K P + +P+ L + KMK + + KP
Sbjct: 247 LEDRLVKRFMRKQSKGPDVPHGVPLTEDQIRALGQAKMKLVGKALKP 293
>gi|343492089|ref|ZP_08730462.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio nigripulchritudo ATCC
27043]
gi|342827429|gb|EGU61817.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio nigripulchritudo ATCC
27043]
Length = 316
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 188/284 (66%), Gaps = 12/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D +++ NK
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPTAIAEANK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAERYELVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSEWLKEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPMTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK + L +GR+ VISFH
Sbjct: 187 AKLIADAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAAEILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
SLEDR+VK F+ +K P + +P + E ++K L + K
Sbjct: 247 SLEDRMVKRFMRKESKGPQVPHGIP----MTEDQIKALGSARMK 286
>gi|387773880|ref|ZP_10129162.1| S-adenosyl-methyltransferase MraW [Haemophilus parahaemolyticus
HK385]
gi|386903372|gb|EIJ68187.1| S-adenosyl-methyltransferase MraW [Haemophilus parahaemolyticus
HK385]
Length = 313
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 180/264 (68%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + + NGIYID TFG+GGHS IL +LG++GRLIA D+D ++
Sbjct: 11 VLLHEAVEGLAV---KPNGIYIDGTFGRGGHSRLILSQLGEQGRLIATDRDPRAIEEAKT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D RF I H F+ + + ++ + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ISDPRFQIFHTTFSAIPAVCEELGLTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD ++G+SA++WL + ++ V++++GEERFAK+IA IV++ + ITRT QL
Sbjct: 128 RMDTSKGLSAAEWLDQVSIDDLTWVLKEFGEERFAKRIATAIVNFNKTSGQKITRTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL L +GR+ +ISFHSL
Sbjct: 188 QIISDAVPFKDKHKHPATRSFQAIRIFINSELDELEKALNSALSVLAPEGRLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK FI N++ + R LPI
Sbjct: 248 EDRMVKQFIKKNSRGKEVPRGLPI 271
>gi|424775773|ref|ZP_18202763.1| 16S rRNA m(4)C1402 methyltransferase [Alcaligenes sp. HPC1271]
gi|422888873|gb|EKU31255.1| 16S rRNA m(4)C1402 methyltransferase [Alcaligenes sp. HPC1271]
Length = 356
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 185/284 (65%), Gaps = 9/284 (3%)
Query: 231 EAINWLNIENERI----NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
EA W +N I +G+Y+D TFG+GGHS +L L +GRLI IDKD +++++ +
Sbjct: 23 EARRW--AQNPEIQGLADGVYVDCTFGRGGHSRLLLSHLSPQGRLIVIDKDPQAIAVAQE 80
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ DSR +++H+ F +L L + ++ + G++ DLGISS QI++ RGFSF+ +GPLD
Sbjct: 81 LAAQDSRVTVVHSGFGDLAQALDELDVGPLQGVMMDLGISSPQIDDAERGFSFMREGPLD 140
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G++A +WLA + +K+VI +YGEERFA +IAK IV R P+ T+ L E
Sbjct: 141 MRMDTSGGLTAEQWLAEVSVEVLKEVIAEYGEERFAFQIAKAIVDRRQSRPLHTTRDLAE 200
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +R ++ ++PATRTFQAIRIY+N+EL+ L+ AL +L +GR+ VI+FHSLE
Sbjct: 201 LVAGVVRTREKGQHPATRTFQAIRIYLNRELEELAHALPSILSRLATRGRLAVIAFHSLE 260
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARCKPKKK 507
DR+VK F+N + RLPI L +P ++ L R P +
Sbjct: 261 DRMVKQFMNAAARPAQEQSRLPILEKDLPQPLVQSLGRILPTDE 304
>gi|410617129|ref|ZP_11328105.1| ribosomal RNA small subunit methyltransferase H [Glaciecola polaris
LMG 21857]
gi|410163398|dbj|GAC32243.1| ribosomal RNA small subunit methyltransferase H [Glaciecola polaris
LMG 21857]
Length = 311
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 126/259 (48%), Positives = 177/259 (68%), Gaps = 8/259 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I L I + +GIY+DATFG+GGH+ +IL +L KG++IA D+D ++
Sbjct: 10 VLLQESIEGLAI---KPDGIYLDATFGRGGHTKQILAQLSAKGQVIAFDRDPSAIEAAKV 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFSI H F+E++ +L ++ KIDGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 LADDKRFSIHHCNFSEMEDVLMSLDLHGKIDGILMDLGVSSPQLDEPERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T+G SA++WLA+A E +I +VI+++GEE+F K+IA IV+ R PIT T QL E
Sbjct: 127 MRMNPTKGQSAAQWLAHAEEQDITQVIKEFGEEKFGKRIAHGIVNARQEVPITTTAQLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
II ++ ++K+PATR+FQ IRIYIN EL + LK LN GR+ VISFHSLE
Sbjct: 187 IIDLAVPVKDKFKHPATRSFQGIRIYINSELDEIRTGLKAALNSLNSGGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTK---IPH 480
DR+VK FI ++ +PH
Sbjct: 247 DRLVKRFIREQSRGLQVPH 265
>gi|28871551|ref|NP_794170.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213966575|ref|ZP_03394726.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
T1]
gi|301384710|ref|ZP_07233128.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
Max13]
gi|302059802|ref|ZP_07251343.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
K40]
gi|302131749|ref|ZP_07257739.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|38257958|sp|Q87WX7.1|RSMH_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|28854802|gb|AAO57865.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213928425|gb|EEB61969.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tomato
T1]
Length = 313
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILNHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSQAQELGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIASAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMESLEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIKIHGKAQ 288
>gi|237799282|ref|ZP_04587743.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022138|gb|EGI02195.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 313
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL L++ K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEALERDLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIASAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMEALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIKIHGKAQ 288
>gi|419845860|ref|ZP_14369123.1| S-adenosyl-methyltransferase MraW [Haemophilus parainfluenzae
HK2019]
gi|386414898|gb|EIJ29440.1| S-adenosyl-methyltransferase MraW [Haemophilus parainfluenzae
HK2019]
Length = 322
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 182/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L + GRLIA+D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSQLSENGRLIAVDRDPRAIAEAEK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I +K + + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNSFSHIPDICQKLDLVGKIDGILLDLGVSSPQLDEADRGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY--RSITP----ITRT 399
RMD T+G+SA++WL + ++ V++ +GEERFAK+IA IV + R++ ++RT
Sbjct: 132 RMDTTQGLSAAEWLKQVSVDDLTWVLKTFGEERFAKRIATAIVEFNKRAVKNGTECLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +S+ ++K+PATR+FQAIRIYIN EL L L L +GR+ +IS
Sbjct: 192 SQLAELIAQSVPFKDKHKHPATRSFQAIRIYINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I R LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPRGLPL 279
>gi|383934176|ref|ZP_09987618.1| ribosomal RNA small subunit methyltransferase H [Rheinheimera
nanhaiensis E407-8]
gi|383704632|dbj|GAB57709.1| ribosomal RNA small subunit methyltransferase H [Rheinheimera
nanhaiensis E407-8]
Length = 314
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 132/264 (50%), Positives = 179/264 (67%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L I + +G Y+D TFG+GGHS IL LG +GRL AID+D +++
Sbjct: 9 VLLQEALDGLAI---KADGCYLDGTFGRGGHSRAILAELGPQGRLFAIDRDPAAIAAAAP 65
Query: 287 IT-DSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RF I H+ F L I ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 66 LAGDPRFHITHSPFAALATIAEQQQIIGKIDGILLDLGVSSPQLDDADRGFSFMRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T GISA+ WLA+A +I V+++YGEE+FA +IA+ IV RS P+TRT QL
Sbjct: 126 MRMDPTSGISAADWLASADVEDISFVLREYGEEKFAWRIAQAIVAARSEQPLTRTAQLAR 185
Query: 405 IILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I S+ + NK K+PATR+FQAIRIYIN EL+ ++ AL + L GR+VVISFHSL
Sbjct: 186 LISDSVPKSNKEKKHPATRSFQAIRIYINSELEQVNQALHAAMQVLKPGGRLVVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ +K + R +P+
Sbjct: 246 EDRLVKQFMRRYSKGEPLPRGIPL 269
>gi|152979594|ref|YP_001345223.1| S-adenosyl-methyltransferase MraW [Actinobacillus succinogenes
130Z]
gi|263446597|sp|A6VQP1.1|RSMH_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|150841317|gb|ABR75288.1| S-adenosyl-methyltransferase MraW [Actinobacillus succinogenes
130Z]
Length = 321
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 180/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L ++ + GIYID TFG+GGHS IL RL GRLIA+D+D ++ K
Sbjct: 15 VLLHEAVQGLALKEQ---GIYIDGTFGRGGHSRLILSRLSPNGRLIAVDRDPLAIVEAEK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I KY + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFQIEHNSFSAIPEICAKYGLTGKVDGILLDLGVSSPQLDDAQRGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WLA +E ++ V++ +GEERFAK+IA IV+Y ++ + RT
Sbjct: 132 RMDTTKGLSASEWLAQVSERDLAWVLKTFGEERFAKRIAAAIVNYNKSAVEKNEEILNRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATRTFQAIRI++N EL L L+ L +GR+ VIS
Sbjct: 192 LQLAELISSAVPFKDKHKHPATRTFQAIRIFLNSELDELESVLQSALTVLAPQGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSRGEDIPKGLPL 279
>gi|347819959|ref|ZP_08873393.1| 16S rRNA m(4)C1402 methyltranserfase [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 307
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 12/282 (4%)
Query: 227 LFLNEAINWL-NIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L EA++ L G ++DATFG+GGH+ IL+RLG +GRL+A DKD E+V+
Sbjct: 10 VLLEEAVSALLGAAGPAPAGTWVDATFGRGGHARLILQRLGPQGRLVAYDKDPEAVAEAT 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F EL + G+L DLG+SS QI++ RGFSF DGPLDM
Sbjct: 70 RITDARFSIRHQGFREL----ADLPAGSVAGVLMDLGVSSPQIDSPGRGFSFRFDGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVE 404
RMD TRG S + WLA A I +V++DYGEERFA IAK IV R + T +L +
Sbjct: 126 RMDTTRGASVADWLAAAETGQIAEVLRDYGEERFAGSIAKAIVAQREKRGALVGTAELAD 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ ++++ + +NPATRTFQA RI+IN EL+ L AL+ L GR+VVISFHSLE
Sbjct: 186 LVARTVKTREPGQNPATRTFQAFRIFINAELEELQQALEASLAVLCPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLA--RCKP 504
DRIVK FI + + DRR P + M+ +A R +P
Sbjct: 246 DRIVKRFIAKHAR-EAFDRRAP---FAAPQAMRLVALGRVRP 283
>gi|254291793|ref|ZP_04962578.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|417821726|ref|ZP_12468340.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE39]
gi|421352115|ref|ZP_15802480.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-25]
gi|423957699|ref|ZP_17735442.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-40]
gi|423985684|ref|ZP_17738998.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-46]
gi|150422305|gb|EDN14267.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|340039357|gb|EGR00332.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE39]
gi|395952560|gb|EJH63174.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-25]
gi|408656571|gb|EKL27665.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-40]
gi|408663527|gb|EKL34396.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HE-46]
Length = 316
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 188/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ + P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESLGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|344338344|ref|ZP_08769276.1| Ribosomal RNA small subunit methyltransferase H [Thiocapsa marina
5811]
gi|343801626|gb|EGV19568.1| Ribosomal RNA small subunit methyltransferase H [Thiocapsa marina
5811]
Length = 296
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/261 (46%), Positives = 177/261 (67%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
NGIY+DATFG+GGHS +L RLG+ GRLIAID+D E+ S+G ++ D RF+++ F
Sbjct: 9 NGIYVDATFGRGGHSRAVLARLGEAGRLIAIDRDPEAASVGRELARADRRFTMVSGRFGS 68
Query: 302 LDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLA 360
+ +L+ ++ + G+L D G+SS Q++ RGFSF +GPLD+RMD TRG SA++WLA
Sbjct: 69 IAGLLEHIGVQGNLCGLLLDFGVSSPQLDTAERGFSFSAEGPLDLRMDPTRGESAAQWLA 128
Query: 361 NATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPA 420
+AT+ I +V+ D+GEERFA++IA+ IV RS +P+T T QL ++ +S+ + K+PA
Sbjct: 129 HATDAEIAQVLFDFGEERFARRIARNIVAQRSESPLTTTTQLAALVARSVPTREPGKHPA 188
Query: 421 TRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPH 480
TRTFQA+RI IN EL + L+ L GR+VVISFHSLEDRIVK F+ ++ P
Sbjct: 189 TRTFQALRIRINDELDEIQDCLRQSCDLLAHAGRLVVISFHSLEDRIVKRFMRMESRGPV 248
Query: 481 IDRRLPIYNYLFEPKMKFLAR 501
+ + LP+ +++ L +
Sbjct: 249 LPKGLPVTADESRGRLRILGK 269
>gi|418465297|ref|ZP_13036234.1| 16S rRNA methyltransferase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756229|gb|EHK90388.1| 16S rRNA methyltransferase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 322
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 181/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L G+LIAID+D ++V+ K
Sbjct: 15 VLLHETVDGLALKK---NGIYIDGTFGRGGHSRLILSQLSVNGKLIAIDRDPQAVAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+E+ I +K + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNTFSEILPICEKLGLVGKVDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++GISA++WLA +E ++ V++ +GEERFAK+IAK IV Y + RT
Sbjct: 132 RMDSSKGISAAEWLAQVSEQDLAWVLKTFGEERFAKRIAKAIVDYNKSAVQNGGEFLART 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRIYIN EL L L+ L +GR+ VIS
Sbjct: 192 LQLAELIAQAVPFKDKHKHPATRSFQAIRIYINAELDELENVLQSALSVLAPQGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKQFMRKQSQGEVIPKGLPL 279
>gi|343519155|ref|ZP_08756140.1| S-adenosyl-methyltransferase MraW [Haemophilus pittmaniae HK 85]
gi|343392921|gb|EGV05481.1| S-adenosyl-methyltransferase MraW [Haemophilus pittmaniae HK 85]
Length = 317
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L ++ +GIYID TFG+GGHS IL +L +GRLIAID+D +++ K
Sbjct: 15 VLLHEAVEGLALKQ---DGIYIDGTFGRGGHSRLILSQLSPEGRLIAIDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I H+ F+ L I +K + + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHSAFSLLPEICEKLDLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY--RSITPITRTKQLV 403
RMD T+G+SAS+WLA + ++ V++ +GEERFAK+IA IV + + ++RT QL
Sbjct: 132 RMDTTKGLSASQWLAQVSVEDLAWVLKTFGEERFAKRIATAIVEFNKNATEYLSRTSQLA 191
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I +S+ ++K+PATR+FQAIRI+IN EL L L L +GR+ +ISFHSL
Sbjct: 192 ELIAQSVPFKDKHKHPATRSFQAIRIFINSELDELESVLNSALNVLAPQGRLSIISFHSL 251
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFE--PKMKFLARC-KP 504
EDR+VK+F+ ++ + + LP+ E K+K + + KP
Sbjct: 252 EDRMVKHFMRKQSRGVELPKGLPLREDQIERGQKLKIIGKAIKP 295
>gi|359796722|ref|ZP_09299316.1| NGG1p interacting factor 3 family protein [Achromobacter
arsenitoxydans SY8]
gi|359365314|gb|EHK67017.1| NGG1p interacting factor 3 family protein [Achromobacter
arsenitoxydans SY8]
Length = 258
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 158/224 (70%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNG+QVEGRS I I+ GVTAS L++TAV+ ADA+LVHHG+ W+ E+
Sbjct: 17 LQAARFKDYCPNGMQVEGRSEIGHIIAGVTASEALLRTAVERGADAVLVHHGWMWRNEDR 76
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR-------FSK 620
++G ++ R+ + N +NLYAYHLPLD HP LGNNAQLA++L + RR +
Sbjct: 77 RVIGTRRTRMALALKNDLNLYAYHLPLDAHPTLGNNAQLARVLGLAPARREDGVPLTCGQ 136
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+ + W+G+ L+ T+ +L + +++G++P+V+GD ++ + +I WCTG AQ
Sbjct: 137 DGLVWLGEATGLR--------TLGELGAQVAQRLGRQPLVVGDPDQPLAQIAWCTGGAQG 188
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
++ DA++ G TAYI+GE+SESTV+++RE+GV + AAGHHATERY
Sbjct: 189 MMADAVDAGATAYITGEVSESTVHLARETGVGFIAAGHHATERY 232
>gi|257092216|ref|YP_003165857.1| S-adenosyl-methyltransferase MraW [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044740|gb|ACV33928.1| S-adenosyl-methyltransferase MraW [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 316
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 181/279 (64%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I + G Y+D TFG+GGHS IL+RLG GRL+A D+D ++V++ +
Sbjct: 10 VLLQEAVEALAI---KPAGTYVDGTFGRGGHSRAILQRLGTGGRLLAFDRDPQAVAMASG 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI---KKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
TD+R ++H F +L L++ + IDG+L D+G+SS Q++ RGFSF D PL
Sbjct: 67 ETDARLLVMHERFGDLADALRRAGCAVEQGIDGVLLDIGVSSPQLDEHARGFSFRGDAPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T+G +A++WL A+E I +VI++YGEERFA +IAK+IV R + T +L
Sbjct: 127 DMRMDTTQGETAAQWLGRASEQEITEVIRNYGEERFAFQIAKKIVAARGERSVATTGELA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++ +++R + ++ ATRTFQA+RI+INQEL+ L++ L L GR+VVISFHSL
Sbjct: 187 ALVRQTVRTREPGQDAATRTFQALRIHINQELEQLALVLPQAMTVLKAGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLAR 501
EDRIVK F+ + R+LP+ L P+++ + +
Sbjct: 247 EDRIVKRFLRDEAAPDRLPRKLPLRAADLPPPRLRLIGK 285
>gi|399543806|ref|YP_006557114.1| ribosomal RNA small subunit methyltransferase H [Marinobacter sp.
BSs20148]
gi|399159138|gb|AFP29701.1| Ribosomal RNA small subunit methyltransferase H [Marinobacter sp.
BSs20148]
Length = 325
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 182/263 (69%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A++ L ++ G Y+DATFG+GGHS ILERL + G L+ IDKD +++
Sbjct: 18 VLLDSAVDLLLTDS---GGHYVDATFGRGGHSRMILERLTESGVLLGIDKDPQAIDEART 74
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ DSRF++ H F +L L++ +++G+L DLG+SS Q+++ RGFSF+ GPLD
Sbjct: 75 LAAADSRFNVFHGSFADLSQALEQAQWPQVEGVLMDLGVSSPQLDDASRGFSFMRKGPLD 134
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + SA++WLA+A E I VI YGEERF+++IA+ IV R+ TPI+ T +L E
Sbjct: 135 MRMNPQQAPSAAEWLASADEKVIADVIFKYGEERFSRRIARLIVERRAETPISTTLELAE 194
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ K++ +++K+PATRTFQAIRI+IN+EL++L + L+ +KL GR+VVISFHSLE
Sbjct: 195 LVAKAVPKKEKHKHPATRTFQAIRIFINRELEDLELGLRAAAEKLAPGGRLVVISFHSLE 254
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ + P + + +P+
Sbjct: 255 DRLVKRFMRDLARGPQMPKGIPV 277
>gi|422644426|ref|ZP_16707564.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957978|gb|EGH58238.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 313
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSHLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL +++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEVQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A+A I +V ++YGEERFAK++A +V R I P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIASAPAEEIARVFKEYGEERFAKRMANAVVQRREIQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L I GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDTLEIGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRDLPIQFKPFEPKIKIHGKAQ 288
>gi|386829481|ref|ZP_10116588.1| S-adenosyl-methyltransferase MraW [Beggiatoa alba B18LD]
gi|386430365|gb|EIJ44193.1| S-adenosyl-methyltransferase MraW [Beggiatoa alba B18LD]
Length = 308
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 180/279 (64%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EAI+ LNI+ +GIYID TFG+GGHS IL RL +GRLIA+D+D ++VS+G
Sbjct: 8 VLLQEAIDALNIQ---ADGIYIDGTFGRGGHSRAILARLSARGRLIALDQDPDAVSVGQA 64
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ +D+RFSI H F +L +++ ++ KI+GIL DLG+SS Q++ RGFSF+ DG L
Sbjct: 65 LQQSDARFSIEHTPFMDLQKVVEARQLQGKINGILLDLGVSSPQLDTPERGFSFMRDGVL 124
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD + G S WLA A E +I ++++YGEER A++IA+ IV R+ P+T T QL
Sbjct: 125 DMRMDTSSGEPVSAWLARAGEKDIADILKNYGEERHARRIARAIVSARTQKPLTHTVQLA 184
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EII + + K+PATR+FQA+RI+IN+EL + L L +GR+ VISFHSL
Sbjct: 185 EIIRTAHPAWEVDKHPATRSFQALRIFINRELAQIEAVLPQALAVLAKQGRLAVISFHSL 244
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRI+K F K PI +L P ++ + +
Sbjct: 245 EDRIIKRFFRDEAKGDPYPPNFPIPAHLLNPTVRLVGKA 283
>gi|187930275|ref|YP_001900762.1| hypothetical protein Rpic_3208 [Ralstonia pickettii 12J]
gi|187727165|gb|ACD28330.1| protein of unknown function DUF34 [Ralstonia pickettii 12J]
Length = 248
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI+ A++ ADAILVHHGYFWKGE+
Sbjct: 14 LQAARFRDYCPNGLQVQGRDTIAHIVTGVTASLALIEAAIEARADAILVHHGYFWKGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +N++AYHLPLD HP LGNNAQL +L S RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDLNMFAYHLPLDAHPGLGNNAQLGALLGISPQGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ D ++ K+ ++P+VIG+ ++ + IGWCTG AQ A+
Sbjct: 134 TL--------AEATTLGDFAQTVSAKLNREPLVIGEGDRPVRTIGWCTGGAQGWFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|226943445|ref|YP_002798518.1| S-adenosyl-methyltransferase MraW [Azotobacter vinelandii DJ]
gi|263446785|sp|C1DQ91.1|RSMH_AZOVD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|226718372|gb|ACO77543.1| S-adenosyl-methyltransferase MraW [Azotobacter vinelandii DJ]
Length = 313
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L+I R G Y+D TFG+GGHS IL RLG G L+ DKD ++V+ G
Sbjct: 10 VLLEEAVDALSI---REGGCYLDGTFGRGGHSRLILGRLGAGGILLGFDKDPQAVAAGLA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D+RF I+ F EL +K + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LATEDARFVIVQRSFAELADEMKMRGLVGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD RG+SA++WLA A+ I V +DYGEERFA+++A+ +V R P RT L
Sbjct: 127 DMRMDPGRGLSAAEWLAQASCEEIAHVFKDYGEERFARRMAQAVVQRRQERPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RI+IN EL +L L + L + GR+ VISFHSL
Sbjct: 187 QVLAAANPAWEKGKNPATRAFQGLRIHINNELGDLEQGLDAALEVLEVGGRLAVISFHSL 246
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ K + R LPI FEP++K + + +
Sbjct: 247 EDRIVKRFMRRQVKGEADKLPRDLPIRPAAFEPRLKLIGKPR 288
>gi|406938377|gb|EKD71623.1| hypothetical protein ACD_46C00143G0005 [uncultured bacterium]
Length = 318
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 178/279 (63%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-N 285
+ L+EA++ L E GIYIDATFG+G HS IL RL GRLIA DKD ++V+
Sbjct: 16 VLLDEAVDHLITSPE---GIYIDATFGRGSHSQTILNRLNANGRLIAFDKDLDAVTFAKQ 72
Query: 286 KITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
KI D RF+I H F + I+L + I K+ GILFDLG+SS Q++N RGFSF +G LD
Sbjct: 73 KIQDKRFAIYHTSFARMKIVLNELQLIGKVSGILFDLGVSSPQLDNPERGFSFTREGKLD 132
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T+GI A W+A E + V+ YGEE+F+++IA+ I+ R TPI T QL +
Sbjct: 133 MRMDTTQGIDAMTWIATVDEDELANVLWQYGEEKFSRRIARAIITARMQTPIKTTGQLAD 192
Query: 405 IILKSIRGNKRY--KNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
II ++ K+ K+PATR+FQAIRI INQEL L +AL L+I GR+ VISFHS
Sbjct: 193 IIKFALPKPKQPHDKHPATRSFQAIRIAINQELTELQLALTQALDVLSIGGRLCVISFHS 252
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR 501
LEDRIVK FI K + R LPI N F ++K + +
Sbjct: 253 LEDRIVKQFIKEYEKGREVPRGLPIKNIAFNARLKSIGK 291
>gi|388543152|ref|ZP_10146443.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. M47T1]
gi|388278464|gb|EIK98035.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. M47T1]
Length = 315
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I+ +G Y+D TFG+GGHS IL+ LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAIQG---DGCYLDGTFGRGGHSRLILKHLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F E+ + + K++G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAEMGSEIASQGLSGKVNGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG+SA++++ANA I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 129 DMRMDPSRGVSAAEFIANAPAEEIARVFKEYGEERFAKRMANAVVARREVKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELADLEAGLEAALESLEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ FEPK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLAKGEADNLPRNLPVRFQAFEPKIKVHGKAQFASEAELK 298
>gi|253997377|ref|YP_003049441.1| S-adenosyl-methyltransferase MraW [Methylotenera mobilis JLW8]
gi|253984056|gb|ACT48914.1| S-adenosyl-methyltransferase MraW [Methylotenera mobilis JLW8]
Length = 360
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 183/284 (64%), Gaps = 6/284 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L+I + NGIY+D TFG+GGHS KIL +LG GRLIA D+D ++ G
Sbjct: 58 VLLNEAVRALDI---KPNGIYVDGTFGRGGHSRKILAQLGDAGRLIAFDRDLAAIEAGKA 114
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+++H+ F ++ L + ++ +DGIL DLGISS QI+ RGFSF D PLDMR
Sbjct: 115 IDDPRFTLVHSHFADMRKRLAELGVQHVDGILLDLGISSPQIDEAERGFSFRYDAPLDMR 174
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD + G +A+ +L TE + +VI++YGEERFAK IA+ I+ R+ IT T QL +I
Sbjct: 175 MDQSSGETAADFLGRTTEQQLAEVIKNYGEERFAKSIARAIIAERNDGRAITTTGQLAQI 234
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ ++ + +NPATRTFQA+RI++NQEL+ LS+ + + L GR+ +ISFHSLED
Sbjct: 235 VAGAVTRFEPGQNPATRTFQALRIFVNQELEELSLTMPQCLELLAPHGRLAIISFHSLED 294
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNY-LFEPKMKFLARC-KPKKK 507
R+VK FI + P+ L +P++K + + KP +
Sbjct: 295 RMVKQFIRGQEDRDDLPANFPVRAADLPQPRLKSVGKAVKPSDE 338
>gi|404403183|ref|ZP_10994767.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas fuscovaginae
UPB0736]
Length = 315
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPGGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K++GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELAAEVAERQMAGKVNGILLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++A+A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFIASAPAEEIARVFKEYGEERFAGRMARAVVERREIKPFERTSDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLDAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEP++K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGEADNLPRNLPVRHQAFEPRIKVHGKARFASEAELK 298
>gi|424073663|ref|ZP_17811078.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407995766|gb|EKG36281.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 313
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 179/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF+I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFAIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA+++A +V R + P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFARRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKPFEPKIKIHGKAQ 288
>gi|126665254|ref|ZP_01736237.1| S-adenosyl-methyltransferase MraW [Marinobacter sp. ELB17]
gi|126630624|gb|EBA01239.1| S-adenosyl-methyltransferase MraW [Marinobacter sp. ELB17]
Length = 325
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 180/263 (68%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A++ L ++ G Y+DATFG+GGHS ILERL + G L+ IDKD +++
Sbjct: 18 VLLDSAVDLLLTDS---GGRYVDATFGRGGHSRMILERLAENGALLGIDKDPQAIDEART 74
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ DSRF+ H F +L L++ + +++G+L DLG+SS Q+++ RGFSF+ GPLD
Sbjct: 75 LAAADSRFNAFHGSFADLGQALEQAHWPQVEGVLMDLGVSSPQLDDASRGFSFMRQGPLD 134
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + SA++WLA+A E I VI YGEERF+++IA+ IV R+ PIT T +L E
Sbjct: 135 MRMNPQQAPSAAEWLASADEKVIADVIFKYGEERFSRRIARLIVERRAEAPITTTLELAE 194
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+ K++ +++K+PATRTFQAIRI+IN+EL++L + LK +KL GR+VVISFHSLE
Sbjct: 195 LAAKAVPKKEKHKHPATRTFQAIRIFINRELEDLELGLKAAAEKLAPGGRLVVISFHSLE 254
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ + P + + +P+
Sbjct: 255 DRLVKRFMRDLARGPQMPKGIPV 277
>gi|325578829|ref|ZP_08148876.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Haemophilus parainfluenzae ATCC 33392]
gi|325159653|gb|EGC71785.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Haemophilus parainfluenzae ATCC 33392]
Length = 322
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 182/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L + GRLIA+D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSQLSENGRLIAVDRDPRAIAEAEK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I +K + + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNSFSHIPDICQKLDLVGKIDGILLDLGVSSPQLDEADRGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY--RSITP----ITRT 399
RMD T+G+SA++WL + ++ V++ +GEERFAK+IA IV + R+I ++RT
Sbjct: 132 RMDTTQGLSAAEWLKQVSVDDLTWVLKTFGEERFAKRIATAIVEFNKRAIKNGTECLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRIYIN EL L L L +GR+ +IS
Sbjct: 192 SQLAELIAQAVPFKDKHKHPATRSFQAIRIYINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I R LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSKGDDIPRGLPL 279
>gi|373467615|ref|ZP_09558909.1| S-adenosyl-methyltransferase MraW [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758336|gb|EHO47109.1| S-adenosyl-methyltransferase MraW [Haemophilus sp. oral taxon 851
str. F0397]
Length = 321
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI ID+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSKLSSNGRLIGIDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK IA IV Y + ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSVEDLTWVLKTFGEERFAKHIATAIVDYNKSAVKNATEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ +YK+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKYKHPATRSFQAIRIFINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|386390058|ref|ZP_10074854.1| S-adenosyl-methyltransferase MraW [Haemophilus paraphrohaemolyticus
HK411]
gi|385693742|gb|EIG24374.1| S-adenosyl-methyltransferase MraW [Haemophilus paraphrohaemolyticus
HK411]
Length = 313
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 179/264 (67%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I + NGIYID TFG+GGHS IL +LG+ GRLIA D+D ++
Sbjct: 11 VLLHEAVDGLAI---KPNGIYIDGTFGRGGHSRLILSKLGENGRLIATDRDPRAIEEAKT 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I+D+RF I H F+ + + ++ I KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 68 ISDTRFQIFHTAFSAIPEVCEELGLIGKIDGILLDLGVSSPQLDDADRGFSFMRDGPLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT--PITRTKQLV 403
RMD T+G+SA++WL + ++ V++++GEERFAK+IA IV++ + IT T QL
Sbjct: 128 RMDTTKGLSAAEWLDQVSIHDLTWVLKEFGEERFAKRIATAIVNFNKTSGQKITHTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++K+PATR+FQAIRI+IN EL L AL L + R+ +ISFHSL
Sbjct: 188 QIISDAVPFKDKHKHPATRSFQAIRIFINSELDELEKALNSALSVLAPEARLSIISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK FI N+K + R LPI
Sbjct: 248 EDRMVKQFIKKNSKGKEVPRGLPI 271
>gi|89095267|ref|ZP_01168188.1| S-adenosyl-methyltransferase [Neptuniibacter caesariensis]
gi|89080474|gb|EAR59725.1| S-adenosyl-methyltransferase [Oceanospirillum sp. MED92]
Length = 312
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 189/281 (67%), Gaps = 7/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L ++++ +G Y+D TFG+GGHS +L+ L + GRL+ IDKD +++ ++
Sbjct: 10 VLLDEAVDAL-VQDK--SGFYVDGTFGRGGHSSLVLQGLDENGRLMGIDKDPTAIAHAHE 66
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ RFSI H F +L + + + K+DG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 RFKDEERFSIAHGSFAQLQQFVTERGMDGKVDGVLLDLGVSSPQLDDASRGFSFLNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD + G SA++W+A A E I VI YGEE+F++++AK IV+YR+ TPIT T QL
Sbjct: 127 DMRMDTSSGESAAEWIARAEESEIADVIYTYGEEKFSRRMAKAIVNYRAETPITTTAQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++ KNPATR FQ IRI+IN+EL++L L L + GR+VVISFHSL
Sbjct: 187 KIIAEANPAWEKGKNPATRAFQGIRIHINKELEDLEKCLDQALDMLKVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK-IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK FI + K H+ +P N + + +MK + + K
Sbjct: 247 EDRIVKRFIRQHVKGDEHLPPGIPFTNDMLKIRMKNVGKAK 287
>gi|342904136|ref|ZP_08725938.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21621]
gi|342904563|ref|ZP_08726362.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21621]
gi|341952984|gb|EGT79498.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21621]
gi|341954145|gb|EGT80639.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21621]
Length = 321
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI ID+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSKLSSNGRLIGIDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV Y ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSVEDLTWVLKTFGEERFAKRIATAIVDYNKSAAKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|451975666|ref|ZP_21926850.1| S-adenosyl-methyltransferase MraW [Vibrio alginolyticus E0666]
gi|451930409|gb|EMD78119.1| S-adenosyl-methyltransferase MraW [Vibrio alginolyticus E0666]
Length = 316
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + K+Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFTIIHGPFSGIAEYAKEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPLVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK FI +K P + +P+ L MK +++ KP K+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPMTEEQIRALGSANMKAVSKAIKPSKQ 297
>gi|258620868|ref|ZP_05715902.1| S-adenosyl-methyltransferase mraW [Vibrio mimicus VM573]
gi|258586256|gb|EEW10971.1| S-adenosyl-methyltransferase mraW [Vibrio mimicus VM573]
Length = 316
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 188/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQN 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + +P+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQ 297
>gi|345429817|ref|YP_004822935.1| S-adenosyl-dependent methyltransferase [Haemophilus parainfluenzae
T3T1]
gi|301155878|emb|CBW15347.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus parainfluenzae T3T1]
Length = 320
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 179/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L + GRLIAID+D +++ K
Sbjct: 13 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSQLSENGRLIAIDRDPRAIAEAEK 69
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I +K + + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 70 IQDPRFHIEHNSFSHIPDICQKLDLVGKIDGILLDLGVSSPQLDEADRGFSFMKDGPLDM 129
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA++WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 130 RMDTTQGLSAAEWLKQVSVDDLTWVLKTFGEERFAKRIATAIVEFNKSAVKNGTECLSRT 189
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRIYIN EL L L L +GR+ +IS
Sbjct: 190 SQLAELIAQAVPFKDKHKHPATRSFQAIRIYINAELDELESVLNSALDMLAPEGRLSIIS 249
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I R LP+
Sbjct: 250 FHSLEDRMVKHFMRKQSKGEDIPRGLPL 277
>gi|145637120|ref|ZP_01792783.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittHH]
gi|145269774|gb|EDK09714.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittHH]
Length = 321
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 179/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + S ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNSTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ +YK+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKYKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|422604925|ref|ZP_16676940.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv. mori
str. 301020]
gi|330888582|gb|EGH21243.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv. mori
str. 301020]
Length = 313
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIPGKAQ 288
>gi|416052140|ref|ZP_11578056.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992410|gb|EGY33813.1| S-adenosyl-methyltransferase MraW [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 322
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 181/268 (67%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L G+LIAID+D ++V+ K
Sbjct: 15 VLLHETVDGLALKK---NGIYIDGTFGRGGHSRLILSQLLANGKLIAIDRDPQAVAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+E+ I +K + K+DGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDPRFHIEHNTFSEILPICEKLGLVGKVDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++GISA++WLA +E ++ V++ +GEERFAK+IAK IV Y + RT
Sbjct: 132 RMDSSKGISAAEWLAQVSEQDLAWVLKTFGEERFAKRIAKAIVDYNKSAVQNGGEFLART 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRIYIN EL L L+ L +GR+ VIS
Sbjct: 192 LQLAELIAQAVPFKDKHKHPATRSFQAIRIYINAELDELENVLQSALSVLAPQGRLSVIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKQFMRKQSQGEVIPKGLPL 279
>gi|417852388|ref|ZP_12497978.1| 16S rRNA m(4)C1402 methyltranserfase [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338216932|gb|EGP02871.1| 16S rRNA m(4)C1402 methyltranserfase [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 321
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 181/270 (67%), Gaps = 10/270 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L ++ + GIYID TFG+GGHS IL RL GRLIAID+D +++
Sbjct: 15 VLLNEAVAGLALKEK---GIYIDGTFGRGGHSRLILSRLADNGRLIAIDRDPRAIAEAKT 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I + RF I H F+++ I ++ N + K+DGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQNPRFHIEHRSFSDIPRICERLNLVGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SAS+WL +E ++ V++ +GEERFAK+IA+ IV+Y ++RT
Sbjct: 132 RMDTTQGLSASEWLQQVSEQDLAWVLKTFGEERFAKRIAQAIVNYNKQALQHGTESLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++ ++K+PATR+FQAIRI+IN EL L LK + L +GR+ +IS
Sbjct: 192 LQLAELIANAVPFKDKHKHPATRSFQAIRIFINAELDELESVLKSAVQVLAPQGRLAIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPIYN 489
FHSLEDR+VK+F+ +K I + LP+ +
Sbjct: 252 FHSLEDRMVKHFMRKQSKGEDIPKGLPLRD 281
>gi|71735888|ref|YP_276238.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416018486|ref|ZP_11565414.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
glycinea str. B076]
gi|416025254|ref|ZP_11569035.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422403846|ref|ZP_16480902.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|88909210|sp|Q48EF0.1|RSMH_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|71556441|gb|AAZ35652.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322458|gb|EFW78551.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330073|gb|EFW86060.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330875017|gb|EGH09166.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 313
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALEV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 288
>gi|241257348|ref|XP_002404552.1| SAM dependent methyltransferase, putative [Ixodes scapularis]
gi|215496661|gb|EEC06301.1| SAM dependent methyltransferase, putative [Ixodes scapularis]
Length = 292
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 178/268 (66%), Gaps = 3/268 (1%)
Query: 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFT 300
++G+Y+D TFG+GGHS +L L + RLI IDKD +++++ ++ DSR +++H+ F
Sbjct: 5 VDGVYVDCTFGRGGHSRLLLSHLSPQARLIVIDKDPQAIAVAQELAAQDSRVTVVHSGFG 64
Query: 301 ELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLA 360
+L L + + + G++ DLGISS QI++ RGFSF+ +GPLDMRMD + G++A +WLA
Sbjct: 65 DLAQALDELEVGPLQGVMMDLGISSPQIDDAERGFSFMREGPLDMRMDTSGGLTAEQWLA 124
Query: 361 NATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPA 420
+ +K+VI +YGEERFA +IAK IV R P+ T+ L E++ +R ++ ++PA
Sbjct: 125 EVSVEVLKEVIAEYGEERFAFQIAKAIVDRRQSRPLHTTRDLAELVAGVVRTREKGQHPA 184
Query: 421 TRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPH 480
TRTFQAIRIY+N+EL+ L+ AL +L +GR+ VI+FHSLEDR+VK F+N +
Sbjct: 185 TRTFQAIRIYLNRELEELAYALPSILSRLATRGRLAVIAFHSLEDRMVKQFMNAAARPAQ 244
Query: 481 IDRRLPIYNY-LFEPKMKFLARCKPKKK 507
RLPI L +P ++ L R P +
Sbjct: 245 EQSRLPILEKDLPQPLVQSLGRILPTDE 272
>gi|398978396|ref|ZP_10687771.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM25]
gi|398137196|gb|EJM26262.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM25]
Length = 315
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRLI DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPDGRLIGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL ++ + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSVVAEQGLAGKVSGILLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R ITP RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVTERRDITPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|256821906|ref|YP_003145869.1| S-adenosyl-methyltransferase MraW [Kangiella koreensis DSM 16069]
gi|256795445|gb|ACV26101.1| S-adenosyl-methyltransferase MraW [Kangiella koreensis DSM 16069]
Length = 311
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 184/278 (66%), Gaps = 6/278 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L I+ NGIYID TFG+GGHS IL L ++GRLI DKD +++++G +
Sbjct: 10 VLLEEAVEALVIDP---NGIYIDCTFGRGGHSRAILSHLSEEGRLIGFDKDLQAIAVGEQ 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D+RF+I+H F+ L+ + K + ++ G+L DLG+SS Q++ RGFSF+ DGPL
Sbjct: 67 LQQEDARFNIVHESFSLLEQEVSKRGWVGEVTGVLMDLGVSSPQLDQAERGFSFMQDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG +A +W+AN E ++ + +GEER+AK+IA+ IV R+ PITRTKQL
Sbjct: 127 DMRMDTTRGQTAEQWIANTDEEDMVWAFKAFGEERYAKRIARAIVEKRAKAPITRTKQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ +++K+PATR FQAIRI +N+EL +L L+ L + GR+V ISFHSL
Sbjct: 187 DIISEAHPRWEKHKHPATRCFQAIRIAVNRELDDLKDTLEQVLNVLKVGGRLVAISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK FI + + LPI + +MK + +
Sbjct: 247 EDRIVKQFIQKQAQGQNFPAGLPITEDMINRRMKKVGK 284
>gi|229514038|ref|ZP_04403500.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae TMA 21]
gi|229349219|gb|EEO14176.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae TMA 21]
Length = 316
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 188/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALCGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + +P+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQ 297
>gi|417840904|ref|ZP_12487012.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M19501]
gi|341950715|gb|EGT77302.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M19501]
Length = 321
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 178/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI +D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSKLSPNGRLIGVDRDPRAIAESQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA++WL + ++ V++ +GEERFAK+IA IV Y ++RT
Sbjct: 132 RMDTTQGLSAAEWLKQVSVEDLTWVLKTFGEERFAKRIATAIVDYNKSAAKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|417839923|ref|ZP_12486084.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M19107]
gi|341951316|gb|EGT77891.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M19107]
Length = 321
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI +D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSKLSPNGRLIGVDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV Y ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSVEDLTWVLRTFGEERFAKRIATAIVDYNKSAAKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|343500673|ref|ZP_08738563.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio tubiashii ATCC 19109]
gi|418477403|ref|ZP_13046536.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342820035|gb|EGU54866.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio tubiashii ATCC 19109]
gi|384575143|gb|EIF05597.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 316
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 201/314 (64%), Gaps = 21/314 (6%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ NK
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEANK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + +Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAVEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLLEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKP-KKKLNIKKYEDYCP 518
SLEDR+VK FI +K P + +P + E ++K L A KP K + K E
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIP----MTEDQIKALGSANLKPVGKAIKPSKQE---- 298
Query: 519 NGLQVEGRSNINVI 532
++V RS +V+
Sbjct: 299 --VEVNARSRSSVL 310
>gi|302185277|ref|ZP_07261950.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
syringae 642]
Length = 313
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPTRGVSAAQFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 288
>gi|440742333|ref|ZP_20921659.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas syringae
BRIP39023]
gi|440377656|gb|ELQ14301.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas syringae
BRIP39023]
Length = 315
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGSETQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 129 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 249 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 290
>gi|422923703|ref|ZP_16956848.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae BJG-01]
gi|341643734|gb|EGS68011.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae BJG-01]
Length = 316
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 188/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I + +GIYID TFG+GGHS IL +LG +GRL +ID+D ++++ K
Sbjct: 10 VLLNESIEGLAI---KPDGIYIDGTFGRGGHSRTILAQLGPQGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + ++Y+ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR +TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEALTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + AL+ L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK F+ ++ P + LP+ L KMK + + KP +
Sbjct: 247 SLEDRMVKRFMRKESQGPEVPHGLPLTQEQIRALGSAKMKTVGKALKPSDQ 297
>gi|260767165|ref|ZP_05876108.1| S-adenosyl-methyltransferase MraW [Vibrio furnissii CIP 102972]
gi|260617839|gb|EEX43015.1| S-adenosyl-methyltransferase MraW [Vibrio furnissii CIP 102972]
Length = 316
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 178/266 (66%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSQLGPNGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + +Y + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAARYELVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSDWLAQADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK F+ +K P + +P+
Sbjct: 247 SLEDRMVKRFMRKESKGPEVPHGIPL 272
>gi|344029937|emb|CCB84902.1| ribosomal RNA small subunit methyltransferase H, partial
[Candidatus Steffania adelgidicola str.
Klausen-Leopoldsdorf]
Length = 302
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+N LN+ R +GIY+D TFG+GGHS IL RL KG+L AID D +V
Sbjct: 10 VLLNEAVNSLNL---RSDGIYLDGTFGRGGHSRLILSRLAPKGKLFAIDCDPLAVQAAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF+IIH F+ + + +N+ ++DGIL D G+SS QI++ RGFSF+ DGPLDM
Sbjct: 67 INDARFTIIHGSFSGIVDYMTTWNLLGRVDGILLDFGVSSTQIDDPDRGFSFMHDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TR SAS+WLA A+E I V++ +GEERFAK+I++ IV ITRT +L +
Sbjct: 127 RMDTTRTQSASEWLAKASEKEIAWVLKTFGEERFAKRISQAIVLRNRQKLITRTFELASL 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I+ +I ++K+PA R+FQAIRIYIN+EL+ + LK K L GR+ +ISFHSLED
Sbjct: 187 IVDTIPFPDKHKHPARRSFQAIRIYINRELEEIERVLKGTLKVLAPGGRLSIISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK+FI ++ P I LP+
Sbjct: 247 RLVKHFIRQYSQRPQILAGLPL 268
>gi|375131964|ref|YP_004994064.1| S-adenosyl-methyltransferase MraW [Vibrio furnissii NCTC 11218]
gi|315181138|gb|ADT88052.1| S-adenosyl-methyltransferase MraW [Vibrio furnissii NCTC 11218]
Length = 316
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 178/266 (66%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSQLGPNGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + +Y + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAEYAARYELVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G+ S WLA A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK F+ +K P + +P+
Sbjct: 247 SLEDRMVKRFMRKESKGPEVPHGIPL 272
>gi|417843512|ref|ZP_12489586.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21127]
gi|341949655|gb|EGT76258.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21127]
Length = 321
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI +D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSKLSSNGRLIGVDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV Y ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDYNKSAAKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|77460902|ref|YP_350409.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens Pf0-1]
gi|88909213|sp|Q3K736.1|RSMH_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|77384905|gb|ABA76418.1| S-adenosyl-methyltransferase [Pseudomonas fluorescens Pf0-1]
Length = 315
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRLI DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPDGRLIGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL ++ + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSVVAERGLTGKVSGILLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R +TP RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDVTPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI +N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIQVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|257483456|ref|ZP_05637497.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|289624974|ref|ZP_06457928.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289647032|ref|ZP_06478375.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422583882|ref|ZP_16659000.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422596830|ref|ZP_16671109.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422682229|ref|ZP_16740496.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|298156868|gb|EFH97958.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330868707|gb|EGH03416.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330987126|gb|EGH85229.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011570|gb|EGH91626.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 313
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 288
>gi|28897226|ref|NP_796831.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus RIMD
2210633]
gi|153839039|ref|ZP_01991706.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus AQ3810]
gi|260366064|ref|ZP_05778530.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus K5030]
gi|260878319|ref|ZP_05890674.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus AN-5034]
gi|260896408|ref|ZP_05904904.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus
Peru-466]
gi|260899187|ref|ZP_05907582.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus AQ4037]
gi|433656745|ref|YP_007274124.1| rRNA small subunit methyltransferase H [Vibrio parahaemolyticus
BB22OP]
gi|33301414|sp|Q9AJH1.1|RSMH_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|13537263|dbj|BAB40616.1| hypothetical protein [Vibrio parahaemolyticus]
gi|28805435|dbj|BAC58715.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149747467|gb|EDM58415.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus AQ3810]
gi|308087564|gb|EFO37259.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus
Peru-466]
gi|308093183|gb|EFO42878.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus AN-5034]
gi|308107133|gb|EFO44673.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus AQ4037]
gi|308111365|gb|EFO48905.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus K5030]
gi|432507433|gb|AGB08950.1| rRNA small subunit methyltransferase H [Vibrio parahaemolyticus
BB22OP]
Length = 316
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGPNGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAQYAEEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IA+ IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIARAIVEYRENEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR FQA RIYIN EL+ + ALK + L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAARILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK FI +K P + +P+ L MK + + KP K+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPLTEAQIKELGSANMKTVGKAIKPSKQ 297
>gi|419839890|ref|ZP_14363291.1| S-adenosyl-methyltransferase MraW [Haemophilus haemolyticus HK386]
gi|386908992|gb|EIJ73676.1| S-adenosyl-methyltransferase MraW [Haemophilus haemolyticus HK386]
Length = 321
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 176/268 (65%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI +D+D +++ K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRLILSKLSSNGRLIGVDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL ++ V++ +GEERFAK+IA IV Y ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVAVEDLTWVLKTFGEERFAKRIATAIVDYNKSAAKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINAELDELESVLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|332531941|ref|ZP_08407825.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038568|gb|EGI75011.1| S-adenosyl-methyltransferase MraW [Pseudoalteromonas haloplanktis
ANT/505]
Length = 285
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 170/244 (69%), Gaps = 2/244 (0%)
Query: 248 IDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS-RFSIIHNCFTELDIIL 306
+D TFG+GGHS +IL RLG +GRL AID+D +++ K D RF+I H F+ L +
Sbjct: 1 MDGTFGRGGHSGQILARLGDEGRLQAIDQDPQAIQSAEKFADDPRFAIAHTRFSNLYEVA 60
Query: 307 KKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEF 365
++ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLDMRMD T G SA++WLA A
Sbjct: 61 QQNDLIGKVDGILLDIGVSSPQLDDAERGFSFMKDGPLDMRMDPTTGRSAAQWLAEAELD 120
Query: 366 NIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQ 425
+I VI+ GEE+F K+IA +++ R TPIT TKQL +++ +++ ++K+PATRTFQ
Sbjct: 121 DITHVIKKLGEEKFGKRIAHKVLEVREHTPITTTKQLADLVDEAVPVKDKFKHPATRTFQ 180
Query: 426 AIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRRL 485
AIRIYIN EL+ + AL+ K L GR+VVISFHSLEDRIVK FI +K + R L
Sbjct: 181 AIRIYINSELEEIQTALQSAVKVLKPGGRLVVISFHSLEDRIVKQFIRKQSKGEALPRGL 240
Query: 486 PIYN 489
P+ +
Sbjct: 241 PLTD 244
>gi|424069281|ref|ZP_17806728.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407995004|gb|EKG35553.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 313
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAAMDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 288
>gi|398852602|ref|ZP_10609254.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM80]
gi|398243691|gb|EJN29273.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM80]
Length = 315
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRLI DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGTDGRLIGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL ++ + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSVVAEQGLSGKVSGILLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPAEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|381395553|ref|ZP_09921250.1| ribosomal RNA small subunit methyltransferase H [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379328782|dbj|GAB56383.1| ribosomal RNA small subunit methyltransferase H [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 321
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 173/269 (64%), Gaps = 5/269 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I L+I + NGIYIDATFG+GGHS IL +LG GRLIA+D+D +++ G
Sbjct: 20 VLLQESIAALDI---KANGIYIDATFGRGGHSRAILSQLGDSGRLIALDRDPQAIEAGAS 76
Query: 287 I-TDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +D RFSI H F + ++ + KIDG+L D+G+SS Q+++ RGFSF DGPLD
Sbjct: 77 LASDQRFSIHHCAFANIKTVVNDLGLYGKIDGVLMDIGVSSPQLDDAKRGFSFQKDGPLD 136
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD G+SA++WL A+ I VI+ YGEE+F +IA ++ R I P+ T +
Sbjct: 137 MRMDTGSGVSAAQWLNTASLSEIATVIKQYGEEKFGTRIAHAVLEQRVIKPLETTAEFAA 196
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I K++ ++K+PATRTFQ +RI+IN ELK L + L L GR+VVISFHSLE
Sbjct: 197 LIDKAVPVKDKFKHPATRTFQGVRIFINGELKQLELGLAESVDVLCTGGRLVVISFHSLE 256
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
DR+VK FI ++ P +LP+ + +
Sbjct: 257 DRMVKRFIKSQSQGPKYPSKLPLTQAVLD 285
>gi|333907824|ref|YP_004481410.1| ribosomal RNA small subunit methyltransferase H [Marinomonas
posidonica IVIA-Po-181]
gi|333477830|gb|AEF54491.1| Ribosomal RNA small subunit methyltransferase H [Marinomonas
posidonica IVIA-Po-181]
Length = 312
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 186/284 (65%), Gaps = 8/284 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+++ L + N++ G Y+D TFG+GGH+ +L RL K GR++ DKD ++ G +
Sbjct: 11 VMLNESVDML-VTNDK--GDYVDGTFGRGGHTRLVLSRL-KDGRMLGFDKDPVAIEFGRE 66
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D+RF+I+ + F + + I + + K+DG++ DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDARFNIVQDSFANMAERIPQVFGDAKVDGVMMDLGVSSPQLDDAERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G+SA++W+A E ++ V+ YGEERF+++IAK I YRS TPI T QL
Sbjct: 127 DMRMNPNEGLSAAEWIARVDEKDLADVMYQYGEERFSRRIAKAICEYRSHTPIVTTLQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I+ ++ ++ KNPATR FQ IRI+IN EL +L L+ L I GR+VVISFHSL
Sbjct: 187 KIVAEANPAWEKGKNPATRAFQGIRIHINNELGDLEKGLEAAVDALKIGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC-KPKK 506
EDRIVK F+ K P + R LPI N + K K + + KP K
Sbjct: 247 EDRIVKRFMKLKAKGPELPRHLPIRNAHLDIKFKTIGKAIKPSK 290
>gi|315633809|ref|ZP_07889098.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Aggregatibacter segnis ATCC 33393]
gi|315477059|gb|EFU67802.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Aggregatibacter segnis ATCC 33393]
Length = 322
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 183/268 (68%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E ++ L ++ NGIYID TFG+GGHS IL +L GRLIAID+D ++V K
Sbjct: 15 VLLHETVDGLALKE---NGIYIDGTFGRGGHSRLILSKLSANGRLIAIDRDPKAVVEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I H+ F+++ I +K N + KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFHIEHSAFSDILPICEKLNLVGKIDGILLDLGVSSPQLDDAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD ++G+SA++WL + +E ++ V++ +GEERFAKKIA IV+Y +TRT
Sbjct: 132 RMDDSKGMSAAEWLQHVSEQDLAWVLKTFGEERFAKKIASAIVNYNKSAVQNGGECLTRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L+ L GR+ +IS
Sbjct: 192 LQLAELIAQTVPFKDKHKHPATRSFQAIRIFINSELDELEKVLQSALTVLAPGGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ ++ I + LP+
Sbjct: 252 FHSLEDRMVKHFMRKQSQGEDIPKGLPL 279
>gi|89902202|ref|YP_524673.1| S-adenosyl-methyltransferase MraW [Rhodoferax ferrireducens T118]
gi|122996777|sp|Q21SW1.1|RSMH_RHOFD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|89346939|gb|ABD71142.1| methyltransferase [Rhodoferax ferrireducens T118]
Length = 309
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/290 (48%), Positives = 181/290 (62%), Gaps = 22/290 (7%)
Query: 227 LFLNEAINWL-----NIENERING--IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE 279
+ LNEA++ L + G +Y+DATFG+GGHS IL R+ RLIA DKD E
Sbjct: 6 VLLNEAVDALFCNPDATADASATGAQVYVDATFGRGGHSRLILSRMTPTDRLIAFDKDAE 65
Query: 280 SVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLL 339
++ I DSRFSI H F+ LD + + G+L DLGISS QI+N RGFSF
Sbjct: 66 ALVEAGNIHDSRFSIRHQGFSHLD----ELPPASVAGVLLDLGISSPQIDNPARGFSFRF 121
Query: 340 DGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITR 398
+GPLDMRMD TRGIS ++WLANA I +VI+DYGEERFA IAK IV R PI+
Sbjct: 122 EGPLDMRMDTTRGISVAQWLANAETEKIAEVIRDYGEERFAGPIAKAIVARRQERGPISS 181
Query: 399 TKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVI 458
T +L +++ +++ + +NPATRTFQA RI+IN EL+ L AL L GR+VVI
Sbjct: 182 TTELAQLVADTVKTREPGQNPATRTFQAFRIFINAELEELQQALAASLLVLAPGGRLVVI 241
Query: 459 SFHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKP 504
SFHSLEDRIVK FI +++ + DRR P F P ++K LAR +P
Sbjct: 242 SFHSLEDRIVKQFIAQHSRDVY-DRRAP-----FAPPKVMQLKALARLRP 285
>gi|417321311|ref|ZP_12107851.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio parahaemolyticus
10329]
gi|328471991|gb|EGF42868.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio parahaemolyticus
10329]
Length = 316
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 180/266 (67%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGPNGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAQYAEEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IA+ IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIARAIVEYRENEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR FQA RIYIN EL+ + ALK + L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAARILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPL 272
>gi|398983535|ref|ZP_10690080.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM24]
gi|399015257|ref|ZP_10717533.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM16]
gi|398109268|gb|EJL99207.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM16]
gi|398157114|gb|EJM45518.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM24]
Length = 315
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRLI DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGTDGRLIGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL ++ + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSVVAEQGLSGKVSGILLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPAEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|154706930|ref|YP_001425301.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii Dugway
5J108-111]
gi|263446157|sp|A9KET2.1|RSMH_COXBN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|154356216|gb|ABS77678.1| S-adenosyl-methyltransferase [Coxiella burnetii Dugway 5J108-111]
Length = 307
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 189/289 (65%), Gaps = 7/289 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ +E + L I R +GIY+D TFG+GGHS IL+RLG GRL+A+DKD ++V++ NK
Sbjct: 7 VLFDEVMEGLAI---RPDGIYVDGTFGRGGHSFGILQRLGPNGRLMAMDKDPDAVAVANK 63
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D+RFSI+H F L ++ + K++GIL D+G+SS Q+ + RGFSF DGPL
Sbjct: 64 ALFEDARFSIVHETFANLQKAVRDRGWEGKVNGILLDIGVSSPQLEDAKRGFSFSKDGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ + + A+ W+ A +I++V+ +YGEERFAK+IA+ IV+ R PITRT++L
Sbjct: 124 DMRMNPKQSMDAASWINQAAMEDIRRVLWNYGEERFAKRIAQAIVNAREEKPITRTQELS 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I++K+ K K+PATRTFQAIRI+IN+EL L L + L + GR+ VISFHSL
Sbjct: 184 DIVIKAYPQRKIKKHPATRTFQAIRIFINRELDELRECLPQCLETLAVGGRLCVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKK 512
EDR+VK FI ++ H+ R +PI + ++K L + IKK
Sbjct: 244 EDRLVKRFIQKESR-DHLPREIPILAKDIKHRLKPLGSLIRPTEAEIKK 291
>gi|254230425|ref|ZP_04923805.1| S-adenosyl-methyltransferase MraW [Vibrio sp. Ex25]
gi|262395267|ref|YP_003287121.1| S-adenosyl-methyltransferase MraW [Vibrio sp. Ex25]
gi|151937058|gb|EDN55936.1| S-adenosyl-methyltransferase MraW [Vibrio sp. Ex25]
gi|262338861|gb|ACY52656.1| S-adenosyl-methyltransferase MraW [Vibrio sp. Ex25]
Length = 316
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 189/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFTIIHGPFSGIAEYAEEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPLVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK FI +K P + +P+ L MK +++ KP K+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPMTEEQIRALGSANMKAVSKAIKPSKQ 297
>gi|17547650|ref|NP_521052.1| hypothetical protein RSc2931 [Ralstonia solanacearum GMI1000]
gi|20978865|sp|Q8XVA0.1|Y2931_RALSO RecName: Full=UPF0135 protein RSc2931
gi|17429954|emb|CAD16638.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
Length = 248
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI+ A+D+ ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVRADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
++G K RL+QL+ + +NL+AYHLPLD HP LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVIGQKHARLKQLLAHDVNLFAYHLPLDAHPTLGNNAQLGALLGIQPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ ++ IGWCTG AQ A++
Sbjct: 134 TL--------PEATTLGAFAEVVAARLDRMPLVIGGADRPVHTIGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|424047937|ref|ZP_17785493.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HENC-03]
gi|408883247|gb|EKM22034.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HENC-03]
Length = 316
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/290 (46%), Positives = 187/290 (64%), Gaps = 14/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + + Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAQYAEDYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC--KPKKKLN 509
SLEDR+VK FI +K P + +P + E +++ L R KP K N
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIP----MTEEQIRALGRANMKPIGKAN 292
>gi|407069979|ref|ZP_11100817.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio cyclitrophicus ZF14]
Length = 316
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/285 (47%), Positives = 187/285 (65%), Gaps = 14/285 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAERYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL +A +I VI+++GE++ A++IAK I+ Y+ P+TRT QL
Sbjct: 127 RMDPTTGIPVSQWLVDADLDDITWVIREFGEDKHARRIAKGIIAYQENEENEPLTRTGQL 186
Query: 403 VEIILKSIRGN-KRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I N K K+PATR FQA RIYIN EL+ + ALK L +GRI VISFH
Sbjct: 187 AKLISDVAPKNFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRISVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKP 504
SLEDR+VK FI ++ P + LP L E ++K L A KP
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLP----LTEDQIKALGSADLKP 287
>gi|423686949|ref|ZP_17661757.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio fischeri SR5]
gi|371493708|gb|EHN69308.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio fischeri SR5]
Length = 316
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 188/284 (66%), Gaps = 12/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS +IL +LG+ GRL +ID+D ++++
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRQILSQLGENGRLYSIDRDPQAIAEAKT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD +F+IIH F+ L +++ + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPKFTIIHGPFSGLKQYVEELDLVGKIDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A +IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLQEADVEDITWVIREFGEDKHAWRIAKGIVAYRENEENEPLTRTSQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + + K K+PATR FQA RIYIN EL + ALK L +GR+ VISFH
Sbjct: 187 AKLISEVAPKSFKEKKHPATRAFQAFRIYINSELDEIDTALKGALDVLAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
SLEDR+VK+FI +K P + LP L E ++K L K K
Sbjct: 247 SLEDRMVKHFIRKESKGPQVPHGLP----LTEEQIKALGSAKMK 286
>gi|326795778|ref|YP_004313598.1| ribosomal RNA small subunit methyltransferase H [Marinomonas
mediterranea MMB-1]
gi|326546542|gb|ADZ91762.1| Ribosomal RNA small subunit methyltransferase H [Marinomonas
mediterranea MMB-1]
Length = 312
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 185/284 (65%), Gaps = 8/284 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E++ L + NE +G Y+D TFG+GGH+ +L +L + G+L+ DKD ++ G K
Sbjct: 11 VMLDESVEML-VTNE--SGQYVDGTFGRGGHTRLVLSKL-RDGKLLGFDKDPVAIEFGRK 66
Query: 287 IT--DSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ DSRF I+ + F LD I + +KIDGI+ DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LEAEDSRFEIVQDSFANMLDHIPAVFGTEKIDGIMMDLGVSSPQLDDAERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +G+SA++W+A A E I V+ YGEERF+++IAK I R PIT T QL
Sbjct: 127 DMRMNPDQGMSAAEWIAVAAEKEIADVMYQYGEERFSRRIAKAICEKRLEAPITTTAQLS 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I+ ++ ++ KNPATR FQ IRIYIN EL +L L++ L + GR+VVISFHSL
Sbjct: 187 KIVAEANPAWEKGKNPATRAFQGIRIYINNELGDLEKGLEVAADSLKVGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC-KPKK 506
EDRIVK F+ +K P + R LPI N + K K + + KP K
Sbjct: 247 EDRIVKRFMKKMSKGPDLPRHLPIQNAHLDIKFKTVGKATKPSK 290
>gi|149910619|ref|ZP_01899257.1| S-adenosyl-methyltransferase [Moritella sp. PE36]
gi|149806347|gb|EDM66322.1| S-adenosyl-methyltransferase [Moritella sp. PE36]
Length = 313
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/267 (49%), Positives = 176/267 (65%), Gaps = 7/267 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN- 285
+ LNE + L++ + +GIYID TFG+GGHS IL +LG+ GRLIAID+D E++++G
Sbjct: 10 VLLNETVAGLDL---KPDGIYIDGTFGRGGHSRFILSQLGENGRLIAIDRDPEAIAVGEA 66
Query: 286 -KITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
K+ D RF I+H F+ + D + K IDG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LKLEDPRFDIVHGPFSGIADYMENKGLTGHIDGVLLDLGVSSPQLDDASRGFSFLRDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T GISA+KWLA A +I V++ +GEERFA+KIA+ +V R P T QL
Sbjct: 127 DMRMDPTSGISAAKWLATADYDDIVWVLKVFGEERFARKIARAVVFDRDDKPFETTSQLA 186
Query: 404 EIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I + + + K K+PATR+FQAIRIYIN EL+ + AL + L GR+ VISFHS
Sbjct: 187 SLICRVVPKSKKETKHPATRSFQAIRIYINSELEEIERALAGALQCLKSGGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYN 489
LEDRIVK FI + + LPI
Sbjct: 247 LEDRIVKQFIRKQARGKEVPYGLPIMQ 273
>gi|424924819|ref|ZP_18348180.1| MraW [Pseudomonas fluorescens R124]
gi|404305979|gb|EJZ59941.1| MraW [Pseudomonas fluorescens R124]
Length = 315
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRLI DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGTDGRLIGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL ++ + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSVVAEQGLSGKVSGILLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQTASDAELK 298
>gi|288939887|ref|YP_003442127.1| S-adenosyl-methyltransferase MraW [Allochromatium vinosum DSM 180]
gi|288895259|gb|ADC61095.1| S-adenosyl-methyltransferase MraW [Allochromatium vinosum DSM 180]
Length = 339
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 174/263 (66%), Gaps = 6/263 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ L +++ +GIY+D TFG+GGHS IL RLG GRL+ D+D E+V++G
Sbjct: 38 VLLEESVSALLVQS---DGIYVDGTFGRGGHSRAILARLGAAGRLLGFDRDPEAVAVGRA 94
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RFSI F ++ +L + + +++G+L DLG+SS Q++ RGFSF+ +GPL
Sbjct: 95 LAAQDPRFSIHQGSFADIGRLLDEAGVDARLNGLLLDLGVSSPQLDTPERGFSFMAEGPL 154
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD G SA++WLA A + I V+ ++GEERFA +IA+ IV R+ TPI T QL
Sbjct: 155 DMRMDPDSGESAAQWLARAEQGEIATVLHEFGEERFANRIARAIVETRTQTPIRTTAQLA 214
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ +++ + K+PATRTFQA+RI +N EL+ L L +L + GR+ VISFHSL
Sbjct: 215 ELVARAVPRREPGKHPATRTFQAVRIQVNGELEALRRCLDQVCDRLAVGGRLAVISFHSL 274
Query: 464 EDRIVKNFINFNTKIPHIDRRLP 486
EDR+VK FI K P + + +P
Sbjct: 275 EDRLVKRFIRREAKGPELPKGVP 297
>gi|417846353|ref|ZP_12492360.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21639]
gi|341952491|gb|EGT79016.1| Ribosomal RNA small subunit methyltransferase H [Haemophilus
haemolyticus M21639]
Length = 321
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLI +D+D +++ K
Sbjct: 15 VLLHEAVNGLVLKE---NGIYIDGTFGRGGHSRLILSKLSPNGRLIGVDRDPRAIAEAQK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I +K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICEKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV Y ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSVEDLTWVLKTFGEERFAKRIATAIVDYNKSAAKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I ++I ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAIPFKDKHKHPATRSFQAIRIFINAELDELESVLNSALDMLAREGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|410090441|ref|ZP_11287036.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas viridiflava
UASWS0038]
gi|409762269|gb|EKN47292.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas viridiflava
UASWS0038]
Length = 315
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 176/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL LG GRL+ DKD ++++ G
Sbjct: 12 VLLEEAVEALAL---RADGCYMDGTFGRGGHSRLILSHLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGSEAQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 129 DMRMDPTRGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVQRREVQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLDAALDALEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK++ + +
Sbjct: 249 EDRIVKLFMRKLAKGEADNMPRNLPIQYKAFEPKIRIHGKAQ 290
>gi|424031996|ref|ZP_17771417.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HENC-01]
gi|408876408|gb|EKM15525.1| S-adenosyl-methyltransferase MraW [Vibrio cholerae HENC-01]
Length = 316
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 179/266 (67%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ +K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEASK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAKYAEEYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPM 272
>gi|149377270|ref|ZP_01895017.1| S-adenosyl-methyltransferase MraW [Marinobacter algicola DG893]
gi|149358458|gb|EDM46933.1| S-adenosyl-methyltransferase MraW [Marinobacter algicola DG893]
Length = 326
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 170/246 (69%), Gaps = 2/246 (0%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+G+Y+D TFG+GGHS IL RLG+ G+L+ IDKD +++ + ++ D+RF H F E
Sbjct: 32 DGVYVDGTFGRGGHSRLILGRLGQGGKLLGIDKDPDAIQVARDLSASDARFQPFHGSFAE 91
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + K++G+L DLG+SS Q+++ RGFSF+ DGPLDMRMD + SA++WLA
Sbjct: 92 LGAAAEAQGWMKVNGVLLDLGVSSPQLDDAARGFSFMRDGPLDMRMDPGQAPSAAQWLAE 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E +I VI YGEE+F+++IA+ +V R P+ T+QL ++ +++ +++K+PAT
Sbjct: 152 ADEKDIANVIWRYGEEKFSRRIARLVVERRKEAPLETTRQLASLVSEAVPKKEKHKHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRI+IN+EL++L + L +KL GR+VVISFHSLEDR+VK F+ + P +
Sbjct: 212 RTFQAIRIFINRELEDLELGLNAAVEKLMPGGRLVVISFHSLEDRLVKRFMRDLARGPRL 271
Query: 482 DRRLPI 487
+ +P+
Sbjct: 272 PKGVPV 277
>gi|393763173|ref|ZP_10351796.1| 16S rRNA m(4)C1402 methyltransferase [Alishewanella agri BL06]
gi|392606090|gb|EIW88978.1| 16S rRNA m(4)C1402 methyltransferase [Alishewanella agri BL06]
Length = 313
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/270 (48%), Positives = 180/270 (66%), Gaps = 6/270 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + L I + +GIY+D TFG+GGHS +IL++LG GRL AID+D +++
Sbjct: 9 VLLAETLAGLAI---KADGIYLDGTFGRGGHSREILQQLGPNGRLYAIDRDPAAIAAAAP 65
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ RF I H+ F L I ++ I KIDGIL DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 66 LQADARFHITHSPFAALAQIAEQQQIVGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G+SA+ WLA+A +I V+++YGEE+FA +IA IV R+ P+TRT QL E
Sbjct: 126 MRMDPTSGVSAADWLASADVEDISFVLREYGEEKFAWRIANSIVSSRAEQPLTRTAQLAE 185
Query: 405 IILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I +S+ + K K+PATR+FQAIRIYIN EL+ ++ AL+ L GR+ VISFHSL
Sbjct: 186 LISRSVPKSAKEKKHPATRSFQAIRIYINSELEQVNQALQGALAVLKPGGRLCVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
EDR+VK F+ ++K + R LP+ N +
Sbjct: 246 EDRLVKQFMRRHSKPAALPRGLPLTNAQLQ 275
>gi|27364047|ref|NP_759575.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio vulnificus CMCP6]
gi|37678790|ref|NP_933399.1| S-adenosyl-methyltransferase MraW [Vibrio vulnificus YJ016]
gi|320157431|ref|YP_004189810.1| rRNA small subunit methyltransferase H [Vibrio vulnificus MO6-24/O]
gi|30173038|sp|Q8DEK2.1|RSMH_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42559438|sp|Q7MNV9.1|RSMH_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|27360164|gb|AAO09102.1| S-adenosyl-methyltransferase MraW [Vibrio vulnificus CMCP6]
gi|37197531|dbj|BAC93370.1| predicted S-adenosylmethionine-dependent methyltransferase [Vibrio
vulnificus YJ016]
gi|319932743|gb|ADV87607.1| rRNA small subunit methyltransferase H [Vibrio vulnificus MO6-24/O]
Length = 316
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 182/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGEHGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMANYAEQYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV +R + P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAHREDETKEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK F+ +K P + +P+
Sbjct: 247 SLEDRMVKRFMRKESKGPEVPHGIPL 272
>gi|241765142|ref|ZP_04763130.1| S-adenosyl-methyltransferase MraW [Acidovorax delafieldii 2AN]
gi|241365221|gb|EER60068.1| S-adenosyl-methyltransferase MraW [Acidovorax delafieldii 2AN]
Length = 309
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 171/263 (65%), Gaps = 15/263 (5%)
Query: 247 YIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIIL 306
++DATFG+GGHS +IL RLG +G L+A DKD E++ +ITD+RFSI H F L
Sbjct: 31 WVDATFGRGGHSRRILLRLGPQGHLVAFDKDPEAIHEATRITDARFSIRHEGFRHL---- 86
Query: 307 KKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFN 366
+ + G+L DLG+SS QI++ RGFSF DGPLDMRMD TRG S ++WLA A
Sbjct: 87 AELPAGSVAGVLMDLGVSSPQIDSPGRGFSFRFDGPLDMRMDTTRGESVAQWLATAEVQQ 146
Query: 367 IKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEIILKSIRGNKRYKNPATRTFQ 425
I +VI+DYGEERFA IAK IV R P+ T +L +++ +++ + +NPATRTFQ
Sbjct: 147 IAEVIRDYGEERFAGPIAKAIVARREERGPLATTAELADLVAGAVKTREPGQNPATRTFQ 206
Query: 426 AIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRRL 485
A+RI+IN EL+ L AL+ L GR+VVISFHSLEDRIVK FI ++K + DRR
Sbjct: 207 ALRIFINAELEELQQALEASLSVLQPGGRLVVISFHSLEDRIVKQFIAQHSKEVY-DRRA 265
Query: 486 PIYNYLFEPK--MKFLA--RCKP 504
P F P MK +A R KP
Sbjct: 266 P-----FAPPKVMKLVALDRIKP 283
>gi|378697354|ref|YP_005179312.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus influenzae 10810]
gi|386266167|ref|YP_005829659.1| 16S rRNA m(4)C1402 methyltranserfase [Haemophilus influenzae R2846]
gi|301169870|emb|CBW29474.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus influenzae 10810]
gi|309973403|gb|ADO96604.1| 16S rRNA m(4)C1402 methyltranserfase [Haemophilus influenzae R2846]
Length = 321
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 179/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + S ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNSTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|289677689|ref|ZP_06498579.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
syringae FF5]
Length = 313
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSETQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD RG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPARGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKPFEPKIKIHGKAQ 288
>gi|300690249|ref|YP_003751244.1| hypothetical protein RPSI07_0568 [Ralstonia solanacearum PSI07]
gi|299077309|emb|CBJ49935.1| conserved protein of unknown function [Ralstonia solanacearum
PSI07]
Length = 248
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR +I IVTGVTASL LI+ AVD++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGRESITHIVTGVTASLALIEAAVDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+ GNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPEFGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A+
Sbjct: 134 SL--------PEATTLGAFAEAVAARLDRTPLVIGGADRLVRTVGWCTGGAQGWFDAAVL 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|398961882|ref|ZP_10678971.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM30]
gi|398151819|gb|EJM40356.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM30]
Length = 315
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRLI DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGTDGRLIGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL ++ + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSVVAEQGLSGKVSGILLDLGVSSPQLDDAERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQTASDAELK 298
>gi|149190159|ref|ZP_01868435.1| S-adenosyl-methyltransferase MraW [Vibrio shilonii AK1]
gi|148836048|gb|EDL53009.1| S-adenosyl-methyltransferase MraW [Vibrio shilonii AK1]
Length = 316
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 182/266 (68%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS +IL +LG+ GRL +ID+D +++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRQILSQLGENGRLYSIDRDPQAIEEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAERYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T G+ S+WLA A +I VI+++GE++ A++IAK IV +R P+TRT QL
Sbjct: 127 RMDPTSGMPVSEWLAQAELDDITWVIREFGEDKHARRIAKAIVAHREDEEKEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK F+ ++ P + +P+
Sbjct: 247 SLEDRMVKRFMRKESRGPQVPHGIPM 272
>gi|349574838|ref|ZP_08886771.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
shayeganii 871]
gi|348013626|gb|EGY52537.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Neisseria
shayeganii 871]
Length = 317
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 179/253 (70%), Gaps = 5/253 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ LN+ R +G+Y+D TFG+GGHS IL RLG+ GRL+ DKD +++++ +
Sbjct: 11 VLLHEAVDALNV---RPDGVYVDGTFGRGGHSRLILSRLGEHGRLVVFDKDPQAIAVARE 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+R +++H F + L I++IDG LFDLGISS QI++ RGFSF D PLD
Sbjct: 68 LAAQDARVAVVHEGFAAFQVALNGLGIREIDGALFDLGISSPQIDDASRGFSFRFDAPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD TRG SA++WLA A E +I +VI++YGEERF+++IA+ IV R +PI T QL +
Sbjct: 128 MRMDTTRGQSAAEWLAEAAEQDIHEVIKNYGEERFSRQIARAIVARRQESPILTTGQLAK 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ + +R +R ++PATRTFQA+RI+IN+EL+ ++ L L GR+ VI+FHSLE
Sbjct: 188 LVAEVVRTRERGQDPATRTFQAVRIFINRELEEVAAVLPQAAGYLKTGGRLAVIAFHSLE 247
Query: 465 DRIVKNFINFNTK 477
DR+VK FI +++
Sbjct: 248 DRMVKQFIRRHSR 260
>gi|421890539|ref|ZP_16321397.1| conserved hypothetical protein [Ralstonia solanacearum K60-1]
gi|378964149|emb|CCF98145.1| conserved hypothetical protein [Ralstonia solanacearum K60-1]
Length = 248
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL L++ A+D++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGRELITHIVTGVTASLALVEAAIDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPELGNNAQLGTLLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A++
Sbjct: 134 TL--------PEATTLGAFAQTVAVRLDRMPLVIGGADRPVQTVGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|398882460|ref|ZP_10637428.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM60]
gi|398199002|gb|EJM85952.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM60]
Length = 315
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R++G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RLDGCYLDGTFGRGGHSRLILSQLGPEGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALESLEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQSASEAELK 298
>gi|197334561|ref|YP_002157005.1| S-adenosyl-methyltransferase MraW [Vibrio fischeri MJ11]
gi|263504510|sp|B5FB43.1|RSMH_VIBFM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|197316051|gb|ACH65498.1| S-adenosyl-methyltransferase MraW [Vibrio fischeri MJ11]
Length = 316
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 187/284 (65%), Gaps = 12/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS +IL +LG+ GRL +ID+D ++++
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRQILSQLGENGRLYSIDRDPQAIAEAKT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD +F+IIH F+ L +++ + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPKFTIIHGPFSGLKQYVEELELVGKIDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A +IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLQEADVEDITWVIREFGEDKHAWRIAKGIVAYRENEENEPLTRTSQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + + K K+PATR FQA RIYIN EL + ALK L +GR+ VISFH
Sbjct: 187 AKLISEVAPKSFKEKKHPATRAFQAFRIYINSELDEIDTALKGALDVLAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
SLEDR+VK+FI +K P + LP L E ++K L K K
Sbjct: 247 SLEDRMVKHFIRKESKGPQVPHGLP----LTEEQIKALGSAKMK 286
>gi|421895813|ref|ZP_16326212.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206586978|emb|CAQ17562.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 248
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI+ A+D++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGREPITHIVTGVTASLALIEAAIDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPELGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A++
Sbjct: 134 VL--------PEATTLGAFAQTVAVRLDRMPLVIGGADRPVQTVGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 VGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|261253815|ref|ZP_05946388.1| S-adenosyl-methyltransferase MraW [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937206|gb|EEX93195.1| S-adenosyl-methyltransferase MraW [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 324
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 179/266 (67%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 18 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGDNGRLYSIDRDPQAIAEAGK 74
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + +Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 75 IDDPRFTIIHGPFSGMAQYAAEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 134
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 135 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPMTRTGQL 194
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 195 AKLISDAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 254
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 255 SLEDRMVKRFIRKESKGPEVPHGIPM 280
>gi|397685935|ref|YP_006523254.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri DSM
10701]
gi|395807491|gb|AFN76896.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas stutzeri DSM
10701]
Length = 315
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 181/282 (64%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS +L +LG +G L+ DKD ++++ G
Sbjct: 12 VLLDEAVAALAV---RPDGRYLDGTFGRGGHSRLLLRQLGPEGCLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + ++ + GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGEEVAQRGWSGTLSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ RGISA++W+A A E I +V ++YGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMNPDRGISAAQWIATAAEEEIARVFKEYGEERFAKRMARAVVQRRNDKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ + ++ KNPATR FQ +RI+IN EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 QVLTAANPAWEKGKNPATRAFQGLRIFINNELGDLETGLEAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + K + R LPI F P++K L + +
Sbjct: 249 EDRIVKQFMRRHAKGEADTLPRDLPIIPKAFVPRLKLLGKPQ 290
>gi|344172642|emb|CCA85296.1| conserved hypothetical protein [Ralstonia syzygii R24]
Length = 248
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR +I IVTGVTASL LI+ AVD++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGRESITHIVTGVTASLALIEAAVDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+ GNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPEFGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A+
Sbjct: 134 TL--------PEATTLGAFAEAVAARLDRTPLVIGGADRLVRTVGWCTGGAQGWFDAAVL 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|375264438|ref|YP_005021881.1| Putative S-adenosylmethionine-dependent methyltransferase [Vibrio
sp. EJY3]
gi|369839762|gb|AEX20906.1| Putative S-adenosylmethionine-dependent methyltransferase [Vibrio
sp. EJY3]
Length = 316
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 188/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + + Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAQDYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IA+ IV YR P+ RT QL
Sbjct: 127 RMDPTTGIPVSQWLMEADLDDITWVIREFGEDKHARRIARAIVEYRENEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I ++ + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISEAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYN----YLFEPKMKFLARC-KPKKK 507
SLEDR+VK FI +K P + +P+ L MK + + KP K+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPLTEAQIKELGSANMKPIGKAIKPSKQ 297
>gi|260220007|emb|CBA27114.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Curvibacter putative symbiont of Hydra magnipapillata]
Length = 311
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 178/294 (60%), Gaps = 12/294 (4%)
Query: 220 ALRIMGFLFLNEAINWLNIE-----NERINGIYIDATFGQGGHSCKILERLGKKGRLIAI 274
A R + LNEA++ L + + Y+DATFG+GGHS IL RL GRLIA
Sbjct: 3 APRTHTTVLLNEAVDALFSDGGTPFDAASLATYVDATFGRGGHSRSILSRLDASGRLIAF 62
Query: 275 DKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRG 334
D+D E+V+ ITD RFSI H F+ L ++ + G+L DLG+SS QI++ RG
Sbjct: 63 DRDPEAVAQAALITDPRFSIRHEGFSNLGVLPSG----SVGGVLMDLGVSSPQIDSPERG 118
Query: 335 FSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT 394
FSF +GPLDMRMD TRG S ++WL A I +VI++YGEERFA IAK IV R
Sbjct: 119 FSFRFEGPLDMRMDTTRGESVAQWLETAEINQIAEVIREYGEERFAGSIAKAIVARRQER 178
Query: 395 -PITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKG 453
PI+ T +L +++ +++ + +NPATRTFQA RI+IN EL+ L AL + L G
Sbjct: 179 GPISTTSELAQLVADTVKTREPGQNPATRTFQAFRIFINAELEELQQALDASLEVLQPGG 238
Query: 454 RIVVISFHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKK 507
R+ VISFHSLEDRIVK FI ++K DRR P K+K L R KP +
Sbjct: 239 RLAVISFHSLEDRIVKQFIAKHSK-EEYDRRAPFAAPKVM-KLKALGRIKPSAE 290
>gi|66047337|ref|YP_237178.1| S-adenosyl-methyltransferase MraW [Pseudomonas syringae pv.
syringae B728a]
gi|75500766|sp|Q4ZNY2.1|RSMH_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|63258044|gb|AAY39140.1| methyltransferase [Pseudomonas syringae pv. syringae B728a]
Length = 313
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSETQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD RGISA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPARGISAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 288
>gi|417953489|ref|ZP_12596534.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|342817090|gb|EGU51977.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio orientalis CIP 102891
= ATCC 33934]
Length = 316
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 179/266 (67%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGDNGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + +Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAQYAAEYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPMTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPM 272
>gi|386332240|ref|YP_006028409.1| hypothetical protein RSPO_c00570 [Ralstonia solanacearum Po82]
gi|334194688|gb|AEG67873.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
Length = 248
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI+ A+D++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGREPITHIVTGVTASLALIEAAIDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPELGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A++
Sbjct: 134 VL--------PEATTLGAFAETVAVRLDRMPLVIGGADRPVQTVGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 VGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|299065505|emb|CBJ36674.1| conserved protein of unknown function [Ralstonia solanacearum
CMR15]
Length = 248
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI+ A+D++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPALGNNAQLGALLGIQPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + IGWCTG AQ A++
Sbjct: 134 ML--------PEATTLGAFAEVVAARLDRMPLVIGGADRPVRTIGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 VGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|422675681|ref|ZP_16735023.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
aceris str. M302273]
gi|330973397|gb|EGH73463.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas syringae pv.
aceris str. M302273]
Length = 313
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSETQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD RG+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPARGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQFKPFEPKIKIHGKAQ 288
>gi|91228506|ref|ZP_01262428.1| S-adenosyl-methyltransferase [Vibrio alginolyticus 12G01]
gi|269967393|ref|ZP_06181453.1| S-adenosyl-methyltransferase mraW [Vibrio alginolyticus 40B]
gi|91187940|gb|EAS74250.1| S-adenosyl-methyltransferase [Vibrio alginolyticus 12G01]
gi|269827981|gb|EEZ82255.1| S-adenosyl-methyltransferase mraW [Vibrio alginolyticus 40B]
Length = 316
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 188/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G+YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGVYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFTIIHGPFSGIAEYAEEYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T G+ S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGVPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNY----LFEPKMKFLARC-KPKKK 507
SLEDR+VK FI +K P + +P+ L MK +++ KP K+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPMTEEQIRALGSANMKAVSKAIKPSKQ 297
>gi|29653474|ref|NP_819166.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii RSA 493]
gi|153207124|ref|ZP_01945903.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii 'MSU Goat
Q177']
gi|161830127|ref|YP_001596084.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii RSA 331]
gi|165918373|ref|ZP_02218459.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii Q321]
gi|212219401|ref|YP_002306188.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii CbuK_Q154]
gi|42559465|sp|Q83F35.1|RSMH_COXBU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446160|sp|A9NA25.1|RSMH_COXBR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263447414|sp|B6J5L7.1|RSMH_COXB1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|29540736|gb|AAO89680.1| S-adenosyl-methyltransferase [Coxiella burnetii RSA 493]
gi|120576785|gb|EAX33409.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii 'MSU Goat
Q177']
gi|161761994|gb|ABX77636.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii RSA 331]
gi|165917879|gb|EDR36483.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii Q321]
gi|212013663|gb|ACJ21043.1| S-adenosyl-methyltransferase [Coxiella burnetii CbuK_Q154]
Length = 307
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 189/289 (65%), Gaps = 7/289 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ +E + L I R +GIY+D TFG+GGHS IL+RLG GRL+A+DKD ++V++ NK
Sbjct: 7 VLFDEVMEGLAI---RPDGIYVDGTFGRGGHSFGILQRLGPNGRLMAMDKDPDAVAVANK 63
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D+RFSI+H F L ++ + K++GIL D+G+SS Q+ + RGFSF DGPL
Sbjct: 64 ALFEDARFSIVHETFANLQKAVRDRGWEGKVNGILLDIGVSSPQLEDAKRGFSFSKDGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ + + A+ W+ A +I++V+ +YGEERFAK+IA+ IV+ R PITRT++L
Sbjct: 124 DMRMNPKQSMDAASWINQAAMEDIRRVLWNYGEERFAKRIAQAIVNAREEKPITRTQELS 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I++K+ + K+PATRTFQAIRI+IN+EL L L + L + GR+ VISFHSL
Sbjct: 184 DIVIKAYPQREIKKHPATRTFQAIRIFINRELDELRECLPQCLETLAVGGRLCVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKK 512
EDR+VK FI ++ H+ R +PI + ++K L + IKK
Sbjct: 244 EDRLVKRFIQKESR-DHLPREIPILAKDIKHRLKPLGSLIRPTEAEIKK 291
>gi|156973213|ref|YP_001444120.1| S-adenosyl-methyltransferase MraW [Vibrio harveyi ATCC BAA-1116]
gi|388600429|ref|ZP_10158825.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio campbellii DS40M4]
gi|444424615|ref|ZP_21220070.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio campbellii CAIM 519 =
NBRC 15631]
gi|263504515|sp|A7MWK7.1|RSMH_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|156524807|gb|ABU69893.1| hypothetical protein VIBHAR_00894 [Vibrio harveyi ATCC BAA-1116]
gi|444242107|gb|ELU53623.1| 16S rRNA m(4)C1402 methyltransferase [Vibrio campbellii CAIM 519 =
NBRC 15631]
Length = 316
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/290 (46%), Positives = 188/290 (64%), Gaps = 14/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAKYAEEYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKPKKKLN 509
SLEDR+VK FI +K P + +P + E +++ L A KP K N
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIP----MTEEQIRALGSANMKPIGKAN 292
>gi|406916272|gb|EKD55295.1| hypothetical protein ACD_60C00015G0003 [uncultured bacterium]
Length = 317
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 177/264 (67%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E I L I + +G+Y+DAT G+GGH+ IL +LG GRL+A+DKD E+V+ +
Sbjct: 16 VMLAEVIEHLAI---KPDGVYLDATIGRGGHAQAILNQLGPTGRLLAMDKDPEAVAYACQ 72
Query: 287 --ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I H F EL + K N + KI GILFDLG+SS Q++N RGFSF+ +G L
Sbjct: 73 HFLDDKRFMIQHGTFAELAKFVAKQNLVGKISGILFDLGVSSPQLDNPERGFSFMKNGKL 132
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD + G+ A+ W+A E + V+ YGEERF+++IA+ IV R ITPIT T QL
Sbjct: 133 DMRMDFSEGMDAATWIAKVDEKELADVLWIYGEERFSRRIARAIVAAREITPITTTLQLA 192
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EII K++ ++ K+PATR+FQAIRI +N+EL +L + L G + L+ GR++VISFHSL
Sbjct: 193 EIIRKAMPVWQKGKHPATRSFQAIRIKVNRELDDLKLGLVQGLEVLSKGGRLLVISFHSL 252
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ + P I LPI
Sbjct: 253 EDRLVKQFMQQRERGPEIPAGLPI 276
>gi|160896909|ref|YP_001562491.1| S-adenosyl-methyltransferase MraW [Delftia acidovorans SPH-1]
gi|333916663|ref|YP_004490395.1| ribosomal RNA small subunit methyltransferase H [Delftia sp. Cs1-4]
gi|263446201|sp|A9BUJ8.1|RSMH_DELAS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|160362493|gb|ABX34106.1| S-adenosyl-methyltransferase MraW [Delftia acidovorans SPH-1]
gi|333746863|gb|AEF92040.1| Ribosomal RNA small subunit methyltransferase H [Delftia sp. Cs1-4]
Length = 309
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 184/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAIN-WLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285
+ L+EA++ L+ + + G ++DATFG+GGHS +IL+RLG G L+A DKD +++
Sbjct: 10 VLLDEAVDALLDGAAQPVAGQWVDATFGRGGHSRRILQRLGPDGALLAFDKDPDAIEEAA 69
Query: 286 KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ITD+RFSI H F L + + G+L DLG+SS QI+N RGFSF +GPLDM
Sbjct: 70 RITDARFSIRHEGFRHL----SELPAGSVQGVLMDLGVSSPQIDNPERGFSFRFEGPLDM 125
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR-SITPITRTKQLVE 404
RMD TRG S + WLA A I +VI+DYGEERFA IAK IV R S P+ T +L E
Sbjct: 126 RMDTTRGQSVADWLAEADAQQIAEVIRDYGEERFAGPIAKAIVARRESQGPLRNTAELAE 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ ++R + +NPATRTFQA+RI+IN EL+ L AL+ + L GR+VVISFHSLE
Sbjct: 186 LVAGAVRTREAGQNPATRTFQALRIFINAELEELEQALEASLRVLAPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKK 506
DRIVK FI ++K + DRR P + +++ L R KP +
Sbjct: 246 DRIVKQFIAKHSKEVY-DRRAP-FAVPTPMRLEALGRIKPSE 285
>gi|83747527|ref|ZP_00944565.1| NIF3-related protein [Ralstonia solanacearum UW551]
gi|207744488|ref|YP_002260880.1| hypothetical protein RSIPO_02698 [Ralstonia solanacearum IPO1609]
gi|83725841|gb|EAP72981.1| NIF3-related protein [Ralstonia solanacearum UW551]
gi|206595894|emb|CAQ62821.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 248
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI+ A+D++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGREPITHIVTGVTASLALIEAAIDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPELGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A++
Sbjct: 134 VL--------PEATTLGAFAQTVAVRLDRMPLVIGGSDRPVQTVGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 VGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|344169054|emb|CCA81377.1| conserved hypothetical protein [blood disease bacterium R229]
Length = 248
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR +I IVTGVTASL LI+ AVD++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGRESITHIVTGVTASLALIEAAVDVHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+ GNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPEFGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A+
Sbjct: 134 SL--------PEDTTLGAFAEAVAARLDRTPLVIGGADRLVRTVGWCTGGAQGWFDAAVL 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|359441506|ref|ZP_09231402.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20429]
gi|358036648|dbj|GAA67651.1| ribosomal RNA small subunit methyltransferase H [Pseudoalteromonas
sp. BSi20429]
Length = 285
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 170/244 (69%), Gaps = 2/244 (0%)
Query: 248 IDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS-RFSIIHNCFTELDIIL 306
+D TFG+GGHS +IL RLG +GRL AID+D +++ K D RF+I H F+ L +
Sbjct: 1 MDGTFGRGGHSGQILARLGDEGRLQAIDQDPQAIQSAEKFADDPRFAIAHTRFSNLYEVA 60
Query: 307 KKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEF 365
++ + I K+DGIL D+G+SS Q+++ RGFSF+ DGPLDMRMD T G SA++WLA A
Sbjct: 61 EQNDLIGKVDGILLDIGVSSPQLDDAARGFSFMKDGPLDMRMDPTTGRSAAQWLAEAELD 120
Query: 366 NIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQ 425
+I VI+ GEE+F K+IA +++ R TPIT TKQL +++ +++ ++K+PATRTFQ
Sbjct: 121 DITHVIKKLGEEKFGKRIAHKVLEVREHTPITTTKQLADLVDEAVPVKDKFKHPATRTFQ 180
Query: 426 AIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRRL 485
AIRIYIN EL+ + AL+ K L GR+VVISFHSLEDRIVK FI ++ + R L
Sbjct: 181 AIRIYINSELEEIQTALQSAVKVLKPGGRLVVISFHSLEDRIVKQFIRKQSRGEVLPRGL 240
Query: 486 PIYN 489
P+ +
Sbjct: 241 PLTD 244
>gi|254509146|ref|ZP_05121246.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus 16]
gi|219547943|gb|EED24968.1| S-adenosyl-methyltransferase MraW [Vibrio parahaemolyticus 16]
Length = 316
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 196/313 (62%), Gaps = 19/313 (6%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +LG GRL +ID+D ++++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSQLGDNGRLYSIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + +Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAAEYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKPKKKLNIKKYEDYCPN 519
SLEDR+VK FI +K P + +P + E ++K L A KP I K N
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIP----MTEEQIKALGSANMKP-----IGKAIKPSKN 297
Query: 520 GLQVEGRSNINVI 532
++V RS +V+
Sbjct: 298 EVEVNARSRSSVL 310
>gi|257095577|ref|YP_003169218.1| hypothetical protein CAP2UW1_4047 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048101|gb|ACV37289.1| protein of unknown function DUF34 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 248
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 152/217 (70%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQVEGRS + +V GV+AS L+ AV+ ADA+LVHHG+FW+GE+
Sbjct: 14 LEAGRFRDYCPNGLQVEGRSEVRRLVAGVSASQALLDAAVERGADAVLVHHGWFWRGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ GI+K RL+ L+ + INL AYHLPLD HP+LGNNAQLA+ + RF + ++GW+G
Sbjct: 74 RVTGIRKTRLQTLLRHDINLIAYHLPLDSHPELGNNAQLARRFGWLAEARFGEQDLGWLG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+I K +T+ ++ ++ ++ + P+ IGD + + +GWC+GAAQ L AI
Sbjct: 134 RI--------AKPMTLSEVAQRVSHELQRVPLRIGDGERLVSRVGWCSGAAQGLFEQAIG 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV Y+SGEISE TV+++RESGVAY AAGHHA+ER+
Sbjct: 186 LGVDLYLSGEISEQTVHLARESGVAYLAAGHHASERH 222
>gi|409201099|ref|ZP_11229302.1| 16S rRNA m(4)C1402 methyltransferase [Pseudoalteromonas
flavipulchra JG1]
Length = 310
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 180/265 (67%), Gaps = 6/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ + E ++ L I+ E GIYID TFG+GGHS +IL+RL GRL AID+D +++ K
Sbjct: 10 VLMTETLDALAIDPE---GIYIDGTFGRGGHSGEILKRLST-GRLQAIDQDPQAIKAAEK 65
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI + F+++ + ++ I ++DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 66 FADDTRFSIARSRFSQIKSVAEQAGILGQVDGILLDIGVSSPQLDDADRGFSFMKDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD G SA++WLA A + VI+ YGEE+FA +IA++++ R T IT T QL +
Sbjct: 126 MRMDPDSGRSAAQWLAEAELEEMVFVIKKYGEEKFATRIARKVIEVREHTAITTTAQLAQ 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I +++ ++K+PATRTFQAIRIYIN EL+ + AL+ + L GR+VVISFHSLE
Sbjct: 186 LIDEAVPVKDKHKHPATRTFQAIRIYINSELEEIQTALQASLEVLKPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K I R LP+ +
Sbjct: 246 DRIVKQFIKKQSKGEAIPRGLPLTD 270
>gi|397169225|ref|ZP_10492660.1| 16S rRNA methyltransferase [Alishewanella aestuarii B11]
gi|396089305|gb|EJI86880.1| 16S rRNA methyltransferase [Alishewanella aestuarii B11]
Length = 312
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 182/266 (68%), Gaps = 6/266 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + L I + +GIY+D TFG+GGHS +IL++LG +GRL AID+D +++
Sbjct: 9 VLLAETLTGLAI---KADGIYLDGTFGRGGHSREILKQLGPQGRLYAIDRDPAAIAAAAP 65
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ RF I H+ F L I + I KIDGIL DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 66 LQADARFHITHSPFAALANIAESLAIFGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G+SA++WLA+A +I V+++YGEE+FA +IA IV+ R+ P+TRT QL +
Sbjct: 126 MRMDPTSGLSAAEWLASADVEDISFVLREYGEEKFAWRIANSIVNSRAEQPLTRTGQLAD 185
Query: 405 IILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I +++ + K K+PATR+FQAIRIYIN EL+ +++AL+ L GR+ VISFHSL
Sbjct: 186 LISRAVPKSAKEKKHPATRSFQAIRIYINSELEQVNLALQGAMAALKPAGRLCVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYN 489
EDR+VK F+ ++K + R LP+ N
Sbjct: 246 EDRLVKQFMRRHSKPEAVPRGLPLTN 271
>gi|303258244|ref|ZP_07344251.1| S-adenosyl-methyltransferase MraW [Burkholderiales bacterium
1_1_47]
gi|331001080|ref|ZP_08324711.1| S-adenosyl-methyltransferase MraW [Parasutterella excrementihominis
YIT 11859]
gi|302858997|gb|EFL82081.1| S-adenosyl-methyltransferase MraW [Burkholderiales bacterium
1_1_47]
gi|329569385|gb|EGG51163.1| S-adenosyl-methyltransferase MraW [Parasutterella excrementihominis
YIT 11859]
Length = 322
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 168/268 (62%), Gaps = 4/268 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
NG+Y+D TFG+GGHS ILE+L +GRLIA D+D E+V +I D RF IIH F +
Sbjct: 25 NGVYVDGTFGRGGHSRLILEKLSPQGRLIAFDRDEEAVKAAAQIQDPRFQIIHAPFASMK 84
Query: 304 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
L K I K+ GI D+G+SS QI++ RGFSF DGPLDMRMD + G +A++W+A A
Sbjct: 85 EELAKIGIDKVTGIFLDIGVSSPQIDDPERGFSFRFDGPLDMRMDTSAGETAAEWIARAD 144
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKR--YKNPAT 421
+ KV +D GEERFA K AK I R+ PI RTKQL ++I ++ NK+ ++PAT
Sbjct: 145 AAEMAKVFKDLGEERFAMKAAKAIEKVRTKEPILRTKQLADLIAATLPRNKKDSAQHPAT 204
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPH- 480
R FQAIRI++NQEL+ L AL+ L G + VISFHSLEDRIVK F
Sbjct: 205 RIFQAIRIHVNQELEQLKRALESAGSLLLPGGVLAVISFHSLEDRIVKKFFEAAANPASC 264
Query: 481 IDRRLPIY-NYLFEPKMKFLARCKPKKK 507
ID RLP+ + L +P R P +K
Sbjct: 265 IDPRLPLLPSQLPQPLFNRAVRILPSEK 292
>gi|269960233|ref|ZP_06174608.1| S-adenosyl-methyltransferase mraW [Vibrio harveyi 1DA3]
gi|269835040|gb|EEZ89124.1| S-adenosyl-methyltransferase mraW [Vibrio harveyi 1DA3]
Length = 316
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/290 (46%), Positives = 187/290 (64%), Gaps = 14/290 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAAK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + + Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAQYAEDYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKPKKKLN 509
SLEDR+VK FI +K P + +P + E +++ L A KP K N
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIP----MTEEQIRALGSANMKPIGKAN 292
>gi|94312163|ref|YP_585373.1| putative metal-binding protein [Cupriavidus metallidurans CH34]
gi|93356015|gb|ABF10104.1| conserved hypothetical protein; putative metal-binding protein
[Cupriavidus metallidurans CH34]
Length = 248
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 149/217 (68%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +++DYCPNGLQV+GR + IVTGVTASL LI A++ ADAILVHHGYFWK E++
Sbjct: 14 LQVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
IVG K RL++L+ INL AYHLPLD HP+LGNNAQL L + T RFS + +GW G
Sbjct: 74 CIVGQKHARLKRLLGADINLLAYHLPLDSHPELGNNAQLGLQLGITPTGRFSDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + + H+ + ++P+VIGD ++ I +GWCTG AQ A++
Sbjct: 134 TL--------PQPMPLSAFAAHVGGVLEREPLVIGDADQMIRTVGWCTGGAQGYFAAAVD 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV Y+SGE+SE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERY 222
>gi|407892755|ref|ZP_11151785.1| 16S rRNA m(4)C1402 methyltransferase [Diplorickettsia massiliensis
20B]
Length = 312
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 188/279 (67%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+FL+E I +L I + GIY+DATFG+GGHS +L++LG GRL+ IDKD +++ +
Sbjct: 10 VFLDEVIQYLAINPQ---GIYVDATFGRGGHSRSLLQKLGSHGRLLVIDKDPAAIASAQQ 66
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIKKI-DGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D R + FT + ++K+ IK+ +GILFDLG+SS Q++ RGFSFL DGPL
Sbjct: 67 LAVQDLRVEVHDGSFTCIAAVIKEKEIKEKINGILFDLGVSSPQLDQAERGFSFLRDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD GISA++W+ E ++ ++ ++YGEER+AK+IA+ I H R+ T IT TKQL
Sbjct: 127 DMRMDPRSGISAAEWIQTVREEDMVRIFKEYGEERYAKRIARAIAHLRNETSITTTKQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I+ ++ +++K+PATR FQAIRI+IN E L++ALK + L + GR+ VISFHSL
Sbjct: 187 DIVSEAHPHWEKHKHPATRVFQAIRIWINNEFGELTMALKQSLEGLAVGGRLAVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYL-FEPKMKFLAR 501
EDRIVK FI P+ + LP+ F+P++K L R
Sbjct: 247 EDRIVKQFIREQACEPNALKCLPMTTPAHFQPRLKVLTR 285
>gi|145633140|ref|ZP_01788872.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 3655]
gi|144986366|gb|EDJ92945.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 3655]
Length = 321
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 178/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D ++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIVEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + S ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNSTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|309782923|ref|ZP_07677643.1| NIF3 family protein [Ralstonia sp. 5_7_47FAA]
gi|404397619|ref|ZP_10989409.1| UPF0135 protein [Ralstonia sp. 5_2_56FAA]
gi|308918347|gb|EFP64024.1| NIF3 family protein [Ralstonia sp. 5_7_47FAA]
gi|348612610|gb|EGY62224.1| UPF0135 protein [Ralstonia sp. 5_2_56FAA]
Length = 248
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 146/216 (67%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR ++ IVTGVTASL LI+ A++ ADAILVHHGYFWKGE+
Sbjct: 14 LQAARFRDYCPNGLQVQGRESVTHIVTGVTASLALIEAAIEARADAILVHHGYFWKGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP LGNNAQL +L S RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLTHDLNLFAYHLPLDAHPDLGNNAQLGALLGISPQGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ T++ ++ ++ + P+VIG+ ++ + +GWCTG AQ A+
Sbjct: 134 AL--------AAPTTLRAFAQTVSARLNRVPLVIGEEDRPVRTVGWCTGGAQGWFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|398876081|ref|ZP_10631241.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM67]
gi|398205373|gb|EJM92157.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM67]
Length = 315
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPEGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALESLEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQSASEAELK 298
>gi|375109694|ref|ZP_09755936.1| 16S rRNA m(4)C1402 methyltransferase [Alishewanella jeotgali KCTC
22429]
gi|374570216|gb|EHR41357.1| 16S rRNA m(4)C1402 methyltransferase [Alishewanella jeotgali KCTC
22429]
Length = 312
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 182/266 (68%), Gaps = 6/266 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + L I + +GIY+D TFG+GGHS +IL++LG +GRL AID+D +++
Sbjct: 9 VLLAETLTGLAI---KADGIYLDGTFGRGGHSREILKQLGPQGRLYAIDRDPAAIAAAAP 65
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ RF I H+ F L I + I KIDGIL DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 66 LQADARFHITHSPFAALANIAESLAIFGKIDGILLDLGVSSPQLDEAERGFSFMRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G+SA++WLA+A +I V+++YGEE+FA +IA IV+ R+ P+TRT QL +
Sbjct: 126 MRMDPTSGLSAAEWLASADVEDISFVLREYGEEKFAWRIANSIVNSRAEQPLTRTGQLAD 185
Query: 405 IILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I +++ + K K+PATR+FQAIRIYIN EL+ +++AL+ L GR+ VISFHSL
Sbjct: 186 LISRAVPKSAKEKKHPATRSFQAIRIYINSELEQVNLALQGAMAALKPGGRLCVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYN 489
EDR+VK F+ ++K + R LP+ N
Sbjct: 246 EDRLVKQFMRRHSKPEAVPRGLPLTN 271
>gi|167035511|ref|YP_001670742.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida GB-1]
gi|262825111|sp|B0KFT4.1|RSMH_PSEPG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|166861999|gb|ABZ00407.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida GB-1]
Length = 315
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPGQGISAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + +FEPK+K + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIKLIGKAQFASEAELK 298
>gi|443468309|ref|ZP_21058539.1| rRNA small subunit methyltransferase H [Pseudomonas
pseudoalcaligenes KF707]
gi|442897426|gb|ELS24368.1| rRNA small subunit methyltransferase H [Pseudomonas
pseudoalcaligenes KF707]
Length = 315
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 187/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS LERLG GRL+ DKD ++++ G
Sbjct: 12 VLLEEAVEGLAL---RGDGCYLDGTFGRGGHSRLALERLGPGGRLLGFDKDPQAIAAGQA 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ ++ KIDG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGDEVRARGLEGKIDGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ RG SA++W+A+A+E I +V ++YGEERFAK++A+ +V R+ P RT L
Sbjct: 129 DMRMNPDRGQSAAQWIASASEDEIARVFKEYGEERFAKRMARAVVQRRAEKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++ + ++ KNPATR FQ IRI+IN EL +L L + L + GR+VVISFHSL
Sbjct: 189 AVLAAANPAWEKGKNPATRAFQGIRIHINNELGDLEQGLDAALESLAVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + K ++ R LPI +FEP++K L + + + +K
Sbjct: 249 EDRIVKLFMRKHAKGEADNLPRDLPIRQAVFEPRLKLLGKPQYASEAELK 298
>gi|325275020|ref|ZP_08141013.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas sp. TJI-51]
gi|324099848|gb|EGB97701.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudomonas sp. TJI-51]
Length = 315
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +G+SA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGVSAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + +FEPK+K + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKVKLIGKAQFASEAELK 298
>gi|319776629|ref|YP_004139117.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus influenzae F3047]
gi|329124142|ref|ZP_08252689.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Haemophilus aegyptius ATCC 11116]
gi|317451220|emb|CBY87453.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus influenzae F3047]
gi|327467567|gb|EGF13065.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Haemophilus aegyptius ATCC 11116]
Length = 321
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 178/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|86148532|ref|ZP_01066819.1| S-adenosyl-methyltransferase [Vibrio sp. MED222]
gi|218708478|ref|YP_002416099.1| S-adenosyl-methyltransferase MraW [Vibrio splendidus LGP32]
gi|263505899|sp|B7VIZ5.1|RSMH_VIBSL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|85833678|gb|EAQ51849.1| S-adenosyl-methyltransferase [Vibrio sp. MED222]
gi|218321497|emb|CAV17449.1| S-adenosyl-methyltransferase mraW [Vibrio splendidus LGP32]
Length = 316
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 187/285 (65%), Gaps = 14/285 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAERYDLVGQVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK I+ Y+ P+TRT QL
Sbjct: 127 RMDPTTGIPVSQWLVEADLDDITWVIREFGEDKHARRIAKGIIAYQENEENEPLTRTGQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GRI VISFH
Sbjct: 187 AKLISDVAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRISVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKP 504
SLEDR+VK FI ++ P + LP L E ++K L A KP
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLP----LTEEQIKALGSADLKP 287
>gi|398866238|ref|ZP_10621738.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM78]
gi|398241575|gb|EJN27225.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM78]
Length = 315
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 182/291 (62%), Gaps = 10/291 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL RLG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSRLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTEL--DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+ D RF ++ F EL ++ + N K+ G+L DLG+SS Q+++ RGFSFL DGP
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAARGMN-GKVSGVLLDLGVSSPQLDDPERGFSFLNDGP 127
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL 402
LDMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 128 LDMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADL 187
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHS
Sbjct: 188 AEVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALESLEVGGRLVVISFHS 247
Query: 463 LEDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
LEDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 248 LEDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQTASDAELK 298
>gi|350530207|ref|ZP_08909148.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio rotiferianus DAT722]
Length = 316
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 177/266 (66%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLYSIDRDPQAIAEAGK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAKYAEEYGLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI---TPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYREDEENEPMVRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPM 272
>gi|293602857|ref|ZP_06685296.1| NIF3 family protein [Achromobacter piechaudii ATCC 43553]
gi|292818651|gb|EFF77693.1| NIF3 family protein [Achromobacter piechaudii ATCC 43553]
Length = 255
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 155/224 (69%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGRS + I+TGVTAS L++ AV+ ADA+LVHHG+ W+ E+
Sbjct: 14 LQAARFKDYCPNGLQVEGRSEVGHIITGVTASEALLRAAVERGADAVLVHHGWMWRNEDR 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR-------FSK 620
++G ++ R+ + N +NLYAYHLPLD HP LGNNAQLA++L RR +
Sbjct: 74 RVIGTRRTRMALALKNDLNLYAYHLPLDAHPTLGNNAQLARVLGLEPLRRDDGTPRTCEQ 133
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+N+ W+G+ ++ T+ L + ++G++P+V+GD ++ + + WCTG AQ
Sbjct: 134 DNLVWLGEATGVQ--------TLGQLGARVAERLGRQPLVVGDPDQPLSSVAWCTGGAQG 185
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+L DA++ G +AYI+GE+SESTV+++RE+GV + AAGHHATERY
Sbjct: 186 MLADAVDAGASAYITGEVSESTVHLARETGVGFIAAGHHATERY 229
>gi|59712816|ref|YP_205592.1| S-adenosyl-methyltransferase MraW [Vibrio fischeri ES114]
gi|68565406|sp|Q5E2P2.1|RSMH_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|59480917|gb|AAW86704.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Vibrio fischeri ES114]
Length = 316
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 187/284 (65%), Gaps = 12/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS +IL +LG+ GRL +ID+D ++++
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRQILSQLGENGRLYSIDRDPQAIAEAKT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD +F+IIH F+ L +++ + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPKFTIIHGPFSGLKQYVEELDLVGKIDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY---RSITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A +IAK IV Y P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLQEADVEDITWVIREFGEDKHAWRIAKGIVAYLENEENEPLTRTSQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + + K K+PATR FQA RIYIN EL + ALK L +GR+ VISFH
Sbjct: 187 AKLISEVAPKSFKEKKHPATRAFQAFRIYINSELDEIDTALKGALDVLAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
SLEDR+VK+FI +K P + LP L E ++K L K K
Sbjct: 247 SLEDRMVKHFIRKESKGPQVPHGLP----LTEEQIKALGSAKMK 286
>gi|170720122|ref|YP_001747810.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida W619]
gi|262825121|sp|B1J1Y2.1|RSMH_PSEPW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|169758125|gb|ACA71441.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida W619]
Length = 315
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLAGKVSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + +FEPK++ + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIRLIGKAQFASEAELK 298
>gi|148980580|ref|ZP_01816127.1| S-adenosyl-methyltransferase [Vibrionales bacterium SWAT-3]
gi|145961163|gb|EDK26479.1| S-adenosyl-methyltransferase [Vibrionales bacterium SWAT-3]
Length = 316
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 187/285 (65%), Gaps = 14/285 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAERYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK I+ Y+ P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLLEADLDDITWVIREFGEDKHARRIAKGIIAYQENEENEPLTRTGQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDVAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKP 504
SLEDR+VK FI ++ P + LP L E ++K L A KP
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLP----LTEEQIKALGSADLKP 287
>gi|398847752|ref|ZP_10604640.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM84]
gi|398251255|gb|EJN36524.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM84]
Length = 315
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAERGLDGKVSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + +FEPK++ + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIRLIGKAQFASEAELK 298
>gi|417950615|ref|ZP_12593733.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio splendidus ATCC 33789]
gi|342806077|gb|EGU41315.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio splendidus ATCC 33789]
Length = 316
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 179/266 (67%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAERYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK I+ Y+ P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLLEADLDDITWVIREFGEDKHARRIAKGIIAYQENEENEPLTRTGQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDVAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI ++ P + LP+
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLPL 272
>gi|300702869|ref|YP_003744470.1| hypothetical protein RCFBP_10520 [Ralstonia solanacearum CFBP2957]
gi|299070531|emb|CBJ41826.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 248
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 147/216 (68%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR I IVTGVTASL LI A++++ADAILVHHGYFWKGE++
Sbjct: 14 LQAARFRDYCPNGLQVQGREPITHIVTGVTASLALIDAAINIHADAILVHHGYFWKGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP+LGNNAQL +L T RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLAHDVNLFAYHLPLDAHPELGNNAQLGALLGIRPTGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + T+ + ++ + P+VIG ++ + +GWCTG AQ A++
Sbjct: 134 TL--------PEATTLGAFAETVAVRLDRMPLVIGGADRPVQTVGWCTGGAQGWFDAAVS 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|148549600|ref|YP_001269702.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida F1]
gi|395445259|ref|YP_006385512.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida ND6]
gi|397697088|ref|YP_006534971.1| S-adenosyl-L-methionine-dependent [Pseudomonas putida DOT-T1E]
gi|421522857|ref|ZP_15969497.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida LS46]
gi|262825108|sp|A5W8Q8.1|RSMH_PSEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|148513658|gb|ABQ80518.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida F1]
gi|388559256|gb|AFK68397.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida ND6]
gi|397333818|gb|AFO50177.1| S-adenosyl-L-methionine-dependent [Pseudomonas putida DOT-T1E]
gi|402753350|gb|EJX13844.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida LS46]
Length = 315
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + +FEPK+K + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIKLIGKAQFASEAELK 298
>gi|392540303|ref|ZP_10287440.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudoalteromonas piscicida
JCM 20779]
Length = 310
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 179/265 (67%), Gaps = 6/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ + E ++ L I E GIYID TFG+GGHS +IL+RL GRL AID+D +++ K
Sbjct: 10 VLMTETLDALAINPE---GIYIDGTFGRGGHSGEILKRLST-GRLQAIDQDPQAIKAAEK 65
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI + F+++ + ++ I ++DGIL D+G+SS Q+++ RGFSF+ DGPLD
Sbjct: 66 FADDARFSIARSRFSQIKSVAEQAGILGQVDGILLDIGVSSPQLDDADRGFSFMKDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD G SA++WLA A + VI+ YGEE+FA +IA++++ R T IT T QL +
Sbjct: 126 MRMDPDSGRSAAQWLAEAELEEMVFVIKKYGEEKFATRIARKVIEVREHTAITTTAQLAQ 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I +++ ++K+PATRTFQAIRIYIN EL+ + AL+ + L GR+VVISFHSLE
Sbjct: 186 LIDEAVPVKDKHKHPATRTFQAIRIYINSELEEIQTALQASLEVLKPGGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI +K I R LP+ +
Sbjct: 246 DRIVKQFIKKQSKGEAIPRGLPLTD 270
>gi|440722123|ref|ZP_20902506.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas syringae
BRIP34876]
gi|440725832|ref|ZP_20906094.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas syringae
BRIP34881]
gi|440361652|gb|ELP98869.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas syringae
BRIP34876]
gi|440367975|gb|ELQ05021.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas syringae
BRIP34881]
Length = 315
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGSETQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T G+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 129 DMRMDPTCGVSAAEFIATAQAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 249 EDRIVKLFMRKLAKGEADNMPRNLPIQYKPFEPKIKIHGKAQ 290
>gi|84394442|ref|ZP_00993158.1| S-adenosyl-methyltransferase [Vibrio splendidus 12B01]
gi|84374941|gb|EAP91872.1| S-adenosyl-methyltransferase [Vibrio splendidus 12B01]
Length = 316
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 187/285 (65%), Gaps = 14/285 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I+ L I + +G YID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESIDGLAI---KPDGTYIDGTFGRGGHSRTILSKLGENGRLFSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++Y+ + ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAERYDLVGQVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G+ S+WL A +I VI+++GE++ A++IAK I+ Y+ P+TRT QL
Sbjct: 127 RMDPTTGVPVSQWLVEADLDDITWVIREFGEDKHARRIAKGIIAYQENEENEPLTRTGQL 186
Query: 403 VEIILK-SIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GRI VISFH
Sbjct: 187 AKLISDVAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRISVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFL--ARCKP 504
SLEDR+VK FI ++ P + LP L E ++K L A KP
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGLP----LTEDQIKALGSADLKP 287
>gi|443642432|ref|ZP_21126282.1| 16S rRNA m(4)C1402 methyltransferase RsmH [Pseudomonas syringae pv.
syringae B64]
gi|443282449|gb|ELS41454.1| 16S rRNA m(4)C1402 methyltransferase RsmH [Pseudomonas syringae pv.
syringae B64]
Length = 313
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 10 VLLEEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL ++ + K+ GIL DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 LAAEDGRFVIVQRSFAELGSETQERGLAGKVSGILLDLGVSSPQLDDPERGFSFMNDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T G+SA++++A A I +V ++YGEERFAK++A +V R + P RT L
Sbjct: 127 DMRMDPTCGVSAAEFIATAPAEEIARVFKEYGEERFAKRMANAVVARREVQPFERTADLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 187 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 246
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK F+ + ++ R LPI FEPK+K + +
Sbjct: 247 EDRIVKLFMRKLAKGEADNMPRNLPIQYKPFEPKIKIHGKAQ 288
>gi|395650352|ref|ZP_10438202.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 315
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGSDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|26988063|ref|NP_743488.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida KT2440]
gi|38258006|sp|Q88N84.1|RSMH_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|24982787|gb|AAN66952.1|AE016324_2 conserved hypothetical protein TIGR00006 [Pseudomonas putida
KT2440]
Length = 315
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +G+SA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGVSAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + +FEPK+K + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIKLIGKAQFASEAELK 298
>gi|430805833|ref|ZP_19432948.1| putative metal-binding protein [Cupriavidus sp. HMR-1]
gi|429501992|gb|ELA00316.1| putative metal-binding protein [Cupriavidus sp. HMR-1]
Length = 248
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 148/217 (68%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +++DYCPNGLQV+GR + IVTGVTASL LI A++ ADAILVHHGYFWK E++
Sbjct: 14 LEVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
IVG K RL++L+ INL AYHLPLD HP+LGNNAQL L + T RFS + +GW G
Sbjct: 74 CIVGQKHARLKRLLGADINLLAYHLPLDNHPELGNNAQLGLQLGITPTGRFSDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + + H+ + ++P+VIGD ++ I +GWCTG AQ A+
Sbjct: 134 TL--------PQPMPLSAFAAHVGGVLEREPLVIGDADQMIRTVGWCTGGAQGYFAAAVG 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV Y+SGE+SE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERY 222
>gi|70732392|ref|YP_262148.1| S-adenosyl-methyltransferase MraW [Pseudomonas protegens Pf-5]
gi|88909211|sp|Q4K6I5.1|RSMH_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|68346691|gb|AAY94297.1| S-adenosyl-methyltransferase MraW [Pseudomonas protegens Pf-5]
Length = 315
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRGISA++++A A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGISAAQFIATAPVEEIARVFKEYGEERFSGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALESLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|83648530|ref|YP_436965.1| S-adenosyl-methyltransferase MraW [Hahella chejuensis KCTC 2396]
gi|123530830|sp|Q2S9Y4.1|RSMH_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|83636573|gb|ABC32540.1| S-adenosyl-methyltransferase MraW [Hahella chejuensis KCTC 2396]
Length = 309
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 174/277 (62%), Gaps = 6/277 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTES--VSLG 284
+ L EA+ L + + +G+YID TFG+GGHS +IL+ LG +GRL+ IDKD + ++
Sbjct: 11 VLLAEAVEALGV---KADGLYIDGTFGRGGHSAEILKALGPQGRLLGIDKDPRARRTAME 67
Query: 285 NKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF F ++ + + +DG+L DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 68 RFSGDDRFLFRQGSFADMASFVSELQWPGVDGVLLDLGVSSPQLDEAERGFSFMQDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD G+SAS+W+ A E I KV+ D GEERFA+++AK IV R PITRT QL E
Sbjct: 128 MRMDPDSGLSASEWVNTAKEEEISKVLWDLGEERFARRMAKAIVAARQTQPITRTLQLAE 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ + ++ KNPATR FQAIRI+IN+EL +L+ L+ F L GR+ VISFHSLE
Sbjct: 188 IVAAANPRWEKGKNPATRAFQAIRIFINRELDDLAQGLEQAFGVLKPGGRLTVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR 501
DR+VK ++ + P + LP+ + PK K + +
Sbjct: 248 DRMVKQYMRDIVRGPKTPKWLPVVDDA-PPKAKLVGK 283
>gi|24375712|ref|NP_719755.1| 16S rRNA (cytosine1402-N4)-methyltransferase RsmH [Shewanella
oneidensis MR-1]
gi|30173050|sp|Q8E9P0.1|RSMH_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|24350646|gb|AAN57199.1| 16S rRNA (cytosine1402-N4)-methyltransferase RsmH [Shewanella
oneidensis MR-1]
Length = 313
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS ++L+RLG+KGRLIAID+D +++ +
Sbjct: 10 VLLEETVGGLNIKD---DGIYIDGTFGRGGHSRQVLQRLGEKGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVEDLGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALTVLAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPHGLPI 269
>gi|386013739|ref|YP_005932016.1| MraW [Pseudomonas putida BIRD-1]
gi|313500445|gb|ADR61811.1| MraW [Pseudomonas putida BIRD-1]
Length = 315
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPDQGISAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKAFEPKIKLIGKAQFASEAELK 298
>gi|119944895|ref|YP_942575.1| S-adenosyl-methyltransferase MraW [Psychromonas ingrahamii 37]
gi|262825199|sp|A1SU11.1|RSMH_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|119863499|gb|ABM02976.1| S-adenosyl-methyltransferase MraW [Psychromonas ingrahamii 37]
Length = 315
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 181/274 (66%), Gaps = 10/274 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L + + +GIY+D TFG+GGHS IL +LG +GRLIAID+D ++ G
Sbjct: 7 VLLDEAVNGLGL---KTDGIYVDGTFGRGGHSRHILGQLGAQGRLIAIDRDPRAIETGEA 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF+IIH F+ L +K+ + +IDG+L DLG+SS QI++ RGFSF+ DGPL
Sbjct: 64 LMKEDPRFTIIHGPFSGLAEYIKELGLAGQIDGVLLDLGVSSPQIDDADRGFSFMRDGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T GISA++WLA A +I V++ +GEE+FA +IA+ IV R+ TP RT QL
Sbjct: 124 DMRMDPTSGISAAQWLAKADVDDIGWVLKTFGEEKFAFRIARAIVADRTETPFLRTLQLA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++I + ++ K+PATR+FQAIRIY+N EL+ + L + L I G++ VISFHSL
Sbjct: 184 QLIERLCPKREKKKHPATRSFQAIRIYVNSELEEIHKVLDGALEILAIGGQLSVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMK 497
EDRIVK FI K R P L E +M+
Sbjct: 244 EDRIVKRFIRKQEK----GREYPPGLPLTEAQMQ 273
>gi|359783091|ref|ZP_09286308.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas psychrotolerans
L19]
gi|359368979|gb|EHK69553.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas psychrotolerans
L19]
Length = 315
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 184/280 (65%), Gaps = 8/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L I+ G Y+D TFG+GGHS +L LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVQALAIQP---AGRYLDGTFGRGGHSRAVLRLLGGEGRLLGFDKDPQAIAAGQA 68
Query: 287 IT--DSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL D + + ++DG+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LATEDPRFEIVQRSFAELGDELAGRGWSGQVDGVLLDLGVSSPQLDDPERGFSFMQDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RG SA+ W+A A E +I +V +++GEERFAK++A+ +V R + P RT L
Sbjct: 129 DMRMDPSRGQSAAAWIATAPEADIAQVFKEFGEERFAKRMARAVVQRREVQPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ K+PATR FQ +RIYIN+EL +L L+ +++L + GR+VVISFHSL
Sbjct: 189 KVLTEANPAWEKGKHPATRAFQGLRIYINRELSDLEQGLQAAYEQLAVGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLAR 501
EDRIVK F+ K + R LPI +FEP ++ L +
Sbjct: 249 EDRIVKQFMRSLAKGEADQLPRDLPIRATVFEPSLRLLGK 288
>gi|104783461|ref|YP_609959.1| S-adenosyl-methyltransferase MraW [Pseudomonas entomophila L48]
gi|122401960|sp|Q1I5B0.1|RSMH_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|95112448|emb|CAK17175.1| S-adenosylmethionine methyltransferase MraW [Pseudomonas
entomophila L48]
Length = 315
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAL---RADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + ++ K+ GIL DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELGAEVAGRDLAGKVSGILLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ +GISA++++A A I +V ++YGEERFA ++A+ +V R P TRT L
Sbjct: 129 DMRMNPNQGISAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+ VISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALDALEVGGRLAVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEP++K + + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVQHKTFEPRIKLIGKAQFASEAELK 298
>gi|319944706|ref|ZP_08018970.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Lautropia
mirabilis ATCC 51599]
gi|319741955|gb|EFV94378.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Lautropia
mirabilis ATCC 51599]
Length = 329
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 181/290 (62%), Gaps = 15/290 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-- 284
+ L+EA+ L I R +G+Y+D TFG+GGHS IL+ LG KGRL+A+D+D E+V+
Sbjct: 20 VLLHEAVAALAI---RPDGVYVDGTFGRGGHSRHILQALGPKGRLLALDRDPEAVAAARA 76
Query: 285 --NKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+ D+RF I+H F+ LD +L + + IDG+L DLGISS Q+++ RGFSF DGP
Sbjct: 77 WKQESGDARFEIVHARFSSLDEVLDAHGLTHIDGLLLDLGISSPQVDDPRRGFSFTGDGP 136
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP---ITRT 399
LDMRMD T G+SA +WL AT I +V++ G+ERFA IAKEI R T I T
Sbjct: 137 LDMRMDPTVGLSAHEWLMQATVEQITEVLKRDGDERFAFPIAKEIAARRDQTDGQGIQTT 196
Query: 400 KQLVEIILKSIRGNKR--YKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVV 457
+QL +++ IR ++ KNPATRTFQA+RI+ N E L+ L + ++L GR+ V
Sbjct: 197 RQLADLVAGVIRRRQKNSAKNPATRTFQALRIHTNDEGGELARVLNVALRRLATGGRLSV 256
Query: 458 ISFHSLEDRIVKNFINFNTKIPHIDRRLPIYN-YLFEPKMKFLARCKPKK 506
ISFHS EDR+VK FI + R P+ +L EP +K L R P +
Sbjct: 257 ISFHSNEDRVVKQFIARHAG--RDAERHPVTGAWLAEPLLKSLGRVLPGE 304
>gi|68249679|ref|YP_248791.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 86-028NP]
gi|148826257|ref|YP_001291010.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittEE]
gi|229846161|ref|ZP_04466273.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 7P49H1]
gi|81335891|sp|Q4QLG6.1|RSMH_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263456014|sp|A5UCX6.1|RSMH_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|68057878|gb|AAX88131.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Haemophilus influenzae
86-028NP]
gi|148716417|gb|ABQ98627.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittEE]
gi|229811165|gb|EEP46882.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 7P49H1]
Length = 321
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 178/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDLRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + S ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNSTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|71908982|ref|YP_286569.1| hypothetical protein Daro_3370 [Dechloromonas aromatica RCB]
gi|71848603|gb|AAZ48099.1| Protein of unknown function DUF34 [Dechloromonas aromatica RCB]
Length = 248
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 147/213 (69%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
K+ DYCPNGLQVEG S I +V GVTAS L+ A++ +ADAILVHHGYFWKGE+ + G
Sbjct: 18 KFRDYCPNGLQVEGCSEITRVVAGVTASQALLDAAIERHADAILVHHGYFWKGEDGRVTG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
I+++RL L+ N INL AYHLPLD HP+LGNNA+LA++L F RF + +I W+G +
Sbjct: 78 IRRQRLASLLANDINLLAYHLPLDAHPELGNNARLARLLGFLPEGRFGEQDIAWLGAL-- 135
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
+ + L + +G++P+V+G ++ I IGWC+G AQ AI GV
Sbjct: 136 ------AEPCDLPSLVSRVAGVLGRQPLVVGGGDRLIRRIGWCSGGAQGYFEQAIALGVD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
AY+SGEISE TV+++RES VAY AAGHHATERY
Sbjct: 190 AYLSGEISEQTVHLARESKVAYLAAGHHATERY 222
>gi|389685803|ref|ZP_10177126.1| S-adenosyl-methyltransferase MraW [Pseudomonas chlororaphis O6]
gi|388550145|gb|EIM13415.1| S-adenosyl-methyltransferase MraW [Pseudomonas chlororaphis O6]
Length = 315
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLDGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALESLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQTASDAELK 298
>gi|410666041|ref|YP_006918412.1| S-adenosyl-methyltransferase MraW [Simiduia agarivorans SA1 = DSM
21679]
gi|409028398|gb|AFV00683.1| S-adenosyl-methyltransferase MraW [Simiduia agarivorans SA1 = DSM
21679]
Length = 306
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 179/278 (64%), Gaps = 8/278 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L + +GIY+D TFG+GGHS +L RL GRLI +DKD ++++
Sbjct: 9 VLLNEAVDALITDP---SGIYVDGTFGRGGHSRLVLTRLAGDGRLIGVDKDPQAIASAEA 65
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ +SRFS+ H F + I + + +DG+L DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 66 LAAANSRFSVRHGSFAQ---IGEWFEPASVDGVLLDLGVSSPQLDQAERGFSFMQDGPLD 122
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T G SA++WLA A +I V++++GEERFAK++A IV R I PIT T +L +
Sbjct: 123 MRMDTTSGQSAAQWLAVAEAEDIAFVLKEFGEERFAKRMASAIVRERDIEPITTTARLAK 182
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ ++ ++ K+PATR FQAIRI+IN EL +L + L+ K L GR+VVISFHSLE
Sbjct: 183 IVSEANPAWEKGKHPATRAFQAIRIFINNELGDLEVVLEAALKVLKPGGRLVVISFHSLE 242
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
DR+VK FI + P + + LP+ +K L +
Sbjct: 243 DRLVKRFIRDKERGPQLPKGLPVMESQITKTLKSLGKA 280
>gi|374621725|ref|ZP_09694255.1| S-adenosyl-methyltransferase MraW [Ectothiorhodospira sp. PHS-1]
gi|373940856|gb|EHQ51401.1| S-adenosyl-methyltransferase MraW [Ectothiorhodospira sp. PHS-1]
Length = 315
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 172/266 (64%), Gaps = 6/266 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKD--TESVSLG 284
+ L E + L I R +G+Y+D TFG+GGH+ IL+RLG G LIA+D+D E+ +L
Sbjct: 14 VLLAETLTALCI---RPDGVYVDGTFGRGGHTGAILDRLGPTGCLIALDQDPEAEAEALA 70
Query: 285 NKITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF + FT L L+ + ++DG+L DLG+SS Q++ RGFSF+ DGPL
Sbjct: 71 RFTGDGRFEFVRTSFTRLLPELEARGLAGRVDGVLLDLGVSSPQLDTPERGFSFMRDGPL 130
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD RG SA++WLA A E I V++ GEERFA++IA+ +V R++ PI RT +L
Sbjct: 131 DMRMDPMRGESAAQWLARADEAEIAGVLKTLGEERFARRIARHLVEQRAVMPIERTGRLA 190
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I ++I ++R+K+PATR+FQAIR+Y+N+EL+ L L L GR+ VISFHSL
Sbjct: 191 ALIAEAIPRHERHKHPATRSFQAIRLYVNRELEALDECLAQIPAVLAPGGRLAVISFHSL 250
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYN 489
EDR VK FI ++ + R LP+
Sbjct: 251 EDRSVKRFIRRQSQGEPVPRGLPVTE 276
>gi|119478644|ref|ZP_01618547.1| S-adenosyl-methyltransferase [marine gamma proteobacterium
HTCC2143]
gi|119448421|gb|EAW29672.1| S-adenosyl-methyltransferase [marine gamma proteobacterium
HTCC2143]
Length = 291
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 168/248 (67%), Gaps = 2/248 (0%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCF 299
R G+Y+D TFG+GGHS +IL +L G L+ IDKD ++++ GN++ D RF I+H F
Sbjct: 3 RPAGVYVDGTFGRGGHSRRILTKLDAMGHLLGIDKDPQAIATGNELAVIDERFEIVHGSF 62
Query: 300 TELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWL 359
E +++ + IDG+L DLG+SS Q++ RGFSFL DGPLDMRM+ G+SA++W+
Sbjct: 63 AETLELIRLRWPQGIDGVLLDLGVSSPQLDQSQRGFSFLRDGPLDMRMNTDAGMSAAEWV 122
Query: 360 ANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNP 419
A ATE I +V++++GEERFAK++A+ I+ R +PI T L +++ ++ +R K+P
Sbjct: 123 ATATESEIARVLKEFGEERFAKRMARAIIKERMASPIETTLHLAKVVAEAHPAWERGKHP 182
Query: 420 ATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIP 479
AT+ FQAIRIYIN EL +L L LNI GR+VVISFHSLEDR+VK FI + +
Sbjct: 183 ATKAFQAIRIYINNELGDLRQFLDQALDVLNIGGRLVVISFHSLEDRMVKRFIRHHVRGD 242
Query: 480 HIDRRLPI 487
+ LP+
Sbjct: 243 QLPANLPV 250
>gi|127514389|ref|YP_001095586.1| S-adenosyl-methyltransferase MraW [Shewanella loihica PV-4]
gi|262826527|sp|A3QIM9.1|RSMH_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|126639684|gb|ABO25327.1| S-adenosyl-methyltransferase MraW [Shewanella loihica PV-4]
Length = 313
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 178/263 (67%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI+ E GIYID TFG+GGHS ++L++LG GRLIAID+D ++++ +
Sbjct: 10 VLLTETVAGLNIKPE---GIYIDGTFGRGGHSREVLKQLGPNGRLIAIDRDPQAIAAAEQ 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI+H F +L + ++ KIDGILFD G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDARFSIVHGGFGQLAQYVDDLGLRGKIDGILFDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK+L +
Sbjct: 127 MRMDNSQGETAAEWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKELAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARVSKSKERNKHPATRVFQAIRIYINSELEQIDQALEGAVTVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI +++ + LP+
Sbjct: 247 DRMVKRFIRRHSQGESVPHGLPL 269
>gi|212213353|ref|YP_002304289.1| S-adenosyl-methyltransferase MraW [Coxiella burnetii CbuG_Q212]
gi|263447408|sp|B6J2R7.1|RSMH_COXB2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|212011763|gb|ACJ19144.1| S-adenosyl-methyltransferase [Coxiella burnetii CbuG_Q212]
Length = 307
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 188/289 (65%), Gaps = 7/289 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ +E + L I R +GIY+D TFG+GGHS IL+RLG GRL+A+DKD ++V++ NK
Sbjct: 7 VLFDEVMEGLAI---RPDGIYVDGTFGRGGHSFGILQRLGPNGRLMAMDKDPDAVAVENK 63
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D+R SI+H F L ++ + K++GIL D+G+SS Q+ + RGFSF DGPL
Sbjct: 64 ALFEDARLSIVHETFANLQKAVRDRGWEGKVNGILLDIGVSSPQLEDAKRGFSFSKDGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ + + A+ W+ A +I++V+ +YGEERFAK+IA+ IV+ R PITRT++L
Sbjct: 124 DMRMNPKQSMDAASWINQAAMEDIRRVLWNYGEERFAKRIAQAIVNAREEKPITRTQELS 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I++K+ + K+PATRTFQAIRI+IN+EL L L + L + GR+ VISFHSL
Sbjct: 184 DIVIKAYPQREIKKHPATRTFQAIRIFINRELDELRECLPQCLETLAVGGRLCVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKK 512
EDR+VK FI ++ H+ R +PI + ++K L + IKK
Sbjct: 244 EDRLVKRFIQKESR-DHLPREIPILAKDIKHRLKPLGSLIRPTEAEIKK 291
>gi|398889449|ref|ZP_10643292.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM55]
gi|398189571|gb|EJM76845.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM55]
Length = 315
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|399002521|ref|ZP_10705207.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM18]
gi|398124961|gb|EJM14457.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM18]
Length = 315
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQSASEAELK 298
>gi|398993696|ref|ZP_10696636.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM21]
gi|398134278|gb|EJM23447.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM21]
Length = 315
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPAEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|167622387|ref|YP_001672681.1| S-adenosyl-methyltransferase MraW [Shewanella halifaxensis HAW-EB4]
gi|262826525|sp|B0TQM9.1|RSMH_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|167352409|gb|ABZ75022.1| S-adenosyl-methyltransferase MraW [Shewanella halifaxensis HAW-EB4]
Length = 315
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 175/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI + +GIYID TFG+GGHS K+LE LG GRLIAID+D ++++ +
Sbjct: 10 VLLTETVAGLNI---KPDGIYIDGTFGRGGHSRKVLEELGPNGRLIAIDRDPQAIAAAEQ 66
Query: 287 I-TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
DSRF I+H F +L ++ +K KIDG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FKDDSRFQIVHGGFGQLADYVEDLGLKGKIDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ ++ IA+ I R P RTK+L +
Sbjct: 127 MRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEKNSRHIARCIAADREKAPFLRTKELAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELEQIDQALEGALTVLAPEGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI N++ + LPI
Sbjct: 247 DRMVKRFIRRNSQGESVPHGLPI 269
>gi|395796148|ref|ZP_10475447.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. Ag1]
gi|421142246|ref|ZP_15602222.1| S-adenosyl-methyltransferase [Pseudomonas fluorescens BBc6R8]
gi|395339786|gb|EJF71628.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. Ag1]
gi|404506640|gb|EKA20634.1| S-adenosyl-methyltransferase [Pseudomonas fluorescens BBc6R8]
Length = 315
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAQFIATAPHEEITRVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRYEAFVPKIKIHGKAQFASEAELK 298
>gi|145641287|ref|ZP_01796867.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae R3021]
gi|145274124|gb|EDK13990.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 22.4-21]
Length = 321
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L RLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNSRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|145639350|ref|ZP_01794956.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittII]
gi|145271653|gb|EDK11564.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittII]
gi|309751224|gb|ADO81208.1| 16S rRNA m(4)C1402 methyltranserfase [Haemophilus influenzae R2866]
Length = 321
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 178/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KI+GIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDSRFQIEHNSFSHIPEICDKLNLVGKINGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|114045888|ref|YP_736438.1| S-adenosyl-methyltransferase MraW [Shewanella sp. MR-7]
gi|123030979|sp|Q0HZS4.1|RSMH_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|113887330|gb|ABI41381.1| S-adenosyl-methyltransferase MraW [Shewanella sp. MR-7]
Length = 313
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS +IL+RLG+ GRLIAID+D +++ +
Sbjct: 10 VLLEETVGGLNIKD---DGIYIDGTFGRGGHSRQILQRLGENGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALTVLAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPHGLPI 269
>gi|326315562|ref|YP_004233234.1| S-adenosyl-methyltransferase MraW [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372398|gb|ADX44667.1| S-adenosyl-methyltransferase MraW [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 311
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 169/262 (64%), Gaps = 9/262 (3%)
Query: 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI 304
G++IDATFG+GGHS +ILERLG +GRL+A DKD E++ +ITD+RFSI H F L
Sbjct: 31 GVWIDATFGRGGHSRRILERLGPQGRLVAFDKDPEAIQEAARITDARFSIRHEGFRHLAE 90
Query: 305 ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATE 364
+ ++ GIL DLG+SS QI++ RGFSF DGPLDMRMD TRG S + WLA A
Sbjct: 91 LPERSAA----GILMDLGVSSPQIDSPGRGFSFRFDGPLDMRMDTTRGESVADWLATADV 146
Query: 365 FNIKKVIQDYGEERFA-KKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRT 423
I +VI++YGEERFA P+ T +L +++ +++ + +NPATRT
Sbjct: 147 GQIAEVIREYGEERFAGPIAKAIAARRAERGPLRTTSELAQLVAGAVKTREAGQNPATRT 206
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDR 483
FQA+RI+IN EL+ L AL+ + L GR+ VISFHSLEDRIVK FI ++K + DR
Sbjct: 207 FQALRIFINAELEELQAALEASLRVLAPGGRLAVISFHSLEDRIVKQFIAQHSKEVY-DR 265
Query: 484 RLPIYNYLFEP-KMKFLARCKP 504
R P +P ++K L R KP
Sbjct: 266 RAPFAAP--QPMRLKALDRIKP 285
>gi|20139121|sp|Q9AJG9.1|RSMH_VIBPR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|13537266|dbj|BAB40618.1| hypothetical protein [Vibrio proteolyticus]
Length = 316
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 187/291 (64%), Gaps = 13/291 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++
Sbjct: 10 VLLHESIEGLAI---KPDGIYIDGTFGRGGHSRTILSQLGENGRLYSIDRDPQAIAEAKT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+H F+ + K++ + K+DG+LFDLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIVHGPFSGIAHYAKQHGLAGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+ RT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLKRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK + L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAAEILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIY----NYLFEPKMKFLARC-KPKKK 507
SLEDR+VK FI ++ P + +P+ L MK + + KP K+
Sbjct: 247 SLEDRMVKRFIRKESQGPQVPHGIPMTEAQIQALGSANMKAIGKAIKPSKQ 297
>gi|229588482|ref|YP_002870601.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens SBW25]
gi|262825100|sp|C3KCS2.1|RSMH_PSEFS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|229360348|emb|CAY47205.1| S-adenosyl-methyltransferase [Pseudomonas fluorescens SBW25]
Length = 315
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGSDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|408483724|ref|ZP_11189943.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. R81]
Length = 315
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALEALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|113971906|ref|YP_735699.1| S-adenosyl-methyltransferase MraW [Shewanella sp. MR-4]
gi|122943466|sp|Q0HE75.1|RSMH_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|113886590|gb|ABI40642.1| S-adenosyl-methyltransferase MraW [Shewanella sp. MR-4]
Length = 313
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS ++L+RLG+ GRLIAID+D +++ +
Sbjct: 10 VLLEETVGGLNIKD---DGIYIDGTFGRGGHSRQVLQRLGENGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALTVLAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPHGLPI 269
>gi|398915506|ref|ZP_10657355.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM49]
gi|398930630|ref|ZP_10664695.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM48]
gi|398164940|gb|EJM53064.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM48]
gi|398176275|gb|EJM64000.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM49]
Length = 315
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMNGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALDCLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|387892146|ref|YP_006322443.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens A506]
gi|423690021|ref|ZP_17664541.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens SS101]
gi|387159445|gb|AFJ54644.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens A506]
gi|388001121|gb|EIK62450.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens SS101]
Length = 315
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYVDGTFGRGGHSRLILSQLGSDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|431932387|ref|YP_007245433.1| S-adenosyl-methyltransferase MraW [Thioflavicoccus mobilis 8321]
gi|431830690|gb|AGA91803.1| S-adenosyl-methyltransferase MraW [Thioflavicoccus mobilis 8321]
Length = 310
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 177/274 (64%), Gaps = 6/274 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ L I R +G Y+DATFG+GGHS IL RLG +GRL+ +D+D +V++G++
Sbjct: 9 VLLEESLHALAI---RSDGCYLDATFGRGGHSRAILARLGPRGRLLGMDRDPLAVAVGHQ 65
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKK-IDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I H F+ L ++ +DG+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 66 LAAEDGRFRIAHTAFSRLTEAAAAAGFRRGVDGLLVDLGMSSPQLDDPARGFSFIGDGPL 125
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD G +A WLA A + I +V++DYGEERFA +IA IV R++ P+ T QL
Sbjct: 126 DMRMDPGDGEAACDWLARAKQAEITRVLRDYGEERFATRIAAAIVRERALRPLATTCQLA 185
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++ ++ + K+PATRTFQA+RI +N+EL+ L+ L L GR+VVISFHSL
Sbjct: 186 ALVEAAVPTREPGKHPATRTFQALRILVNRELEELAGLLDQVIDLLAAGGRLVVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMK 497
EDR+VK FI + R +P+ + +P+++
Sbjct: 246 EDRLVKRFIRDQFRGEQFPRGVPVTDRERQPQLR 279
>gi|319941799|ref|ZP_08016121.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Sutterella wadsworthensis 3_1_45B]
gi|319804732|gb|EFW01599.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Sutterella wadsworthensis 3_1_45B]
Length = 315
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 168/252 (66%), Gaps = 9/252 (3%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301
R +G+Y+D TFG+GGHS ILERL ++GRLIA D+D E+V+ I D RF I+H F+
Sbjct: 21 RPDGLYVDGTFGRGGHSRLILERLAQQGRLIAFDRDPEAVAAAAAIKDPRFQIVHAPFSA 80
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I+++DGI D+G+SS QI++ RGFSF +GPLDMRMD + G +A++WLA
Sbjct: 81 MKERLGDLGIRQVDGIFLDIGVSSPQIDDPSRGFSFRFEGPLDMRMDTSCGETAAEWLAR 140
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKR--YKNP 419
A+ I +V+ D+GEERFA +IA+ IV RS PIT T L +++ ++ N+R ++P
Sbjct: 141 ASVEEIAEVLADFGEERFAHRIARAIVEARSRAPITTTGALAKLVEAAVPKNRRDAAQHP 200
Query: 420 ATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIP 479
ATRTFQA+RI +N EL L L+ L GR+ VISFHSLEDRIVK F F ++
Sbjct: 201 ATRTFQAVRIQVNHELDELKTTLESAGALLAPAGRLAVISFHSLEDRIVKRF--FEKRL- 257
Query: 480 HIDR----RLPI 487
H DR RLP+
Sbjct: 258 HPDRDLDPRLPM 269
>gi|383756801|ref|YP_005435786.1| ribosomal RNA small subunit methyltransferase H [Rubrivivax
gelatinosus IL144]
gi|381377470|dbj|BAL94287.1| ribosomal RNA small subunit methyltransferase H [Rubrivivax
gelatinosus IL144]
Length = 310
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 12/282 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + +G+Y+D TFG+GGH+ +L L + R++A D+D E+++
Sbjct: 11 VLLPEAVQALVTQE---DGLYVDGTFGRGGHTRALLAALSPRARVVAFDRDPEAIAAAAA 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RFSI H F + L ++++ G+L DLG+SS QI+ RGFSF D PLDMR
Sbjct: 68 IDDGRFSICHASFGAMREELAARGVERVQGVLLDLGVSSPQIDTPERGFSFRFDAPLDMR 127
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS-ITPITRTKQLVEI 405
MD TRG +A+ +LA A E +I +VI+DYGEERFA +IAK +V R P+ T +L +
Sbjct: 128 MDTTRGETAADFLARADERHIAQVIRDYGEERFALQIAKAVVARRQGGDPLRTTGELSAL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ ++++ + ++PATRTFQA+RI++N EL+ L L + L GR+VVISFHSLED
Sbjct: 188 VARAVKTREPGQDPATRTFQALRIFVNAELEALEQGLSAALQLLAPGGRLVVISFHSLED 247
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP---KMKFLARCKP 504
RIVKNFI ++ DRR P+ P K+K +AR KP
Sbjct: 248 RIVKNFITRESR-EEFDRRAPMAP----PQALKLKAIARVKP 284
>gi|384228229|ref|YP_005619964.1| 16S rRNA m4C1402 methyltransferase [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
gi|345539162|gb|AEO08029.1| 16S rRNA m4C1402 methyltransferase [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
Length = 309
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/279 (50%), Positives = 186/279 (66%), Gaps = 8/279 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL- 302
NGIYID+TFG GGH+ IL+ LGK G+L AIDKD + SLG I DSRF II+ F++L
Sbjct: 14 NGIYIDSTFGMGGHTKAILKELGKDGKLYAIDKDPIAYSLGKNIQDSRFHIINQNFSKLL 73
Query: 303 DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANA 362
D K I K+DGI+FDLG+SS Q++N RGFSF DGPLDMRM+ GISA+ WL ++
Sbjct: 74 DYAKNKKIIGKVDGIIFDLGVSSIQLDNHNRGFSFKKDGPLDMRMNPQSGISAADWLFSS 133
Query: 363 TEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATR 422
+ I V++ +GEERF+KKIA I ++ +I IT T +L II ++I +K+PA R
Sbjct: 134 STQEIAHVLKKFGEERFSKKIAYAIKYFSNIKKITNTLELSNIIKQAIPIKNIFKHPARR 193
Query: 423 TFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHID 482
+FQAIRIYINQEL+ + IAL K L GRI +ISFHSLEDRIVK FI N++ I
Sbjct: 194 SFQAIRIYINQELEEIKIALDSTLKILKPGGRISIISFHSLEDRIVKQFIINNSRSAMIP 253
Query: 483 RRLPIYNYLFEPKMKFLARCKPK--KKLNIKKYE-DYCP 518
+PI E ++K L C+ K +++ KYE +Y P
Sbjct: 254 YGMPIT----EKQIKKLKICELKMIDRISPSKYEINYNP 288
>gi|438000224|ref|YP_007183957.1| 16S rRNA (cytosine1402-N4)-methyltransferase [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451813150|ref|YP_007449603.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339458|gb|AFZ83880.1| 16S rRNA (cytosine1402-N4)-methyltransferase [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451779119|gb|AGF49999.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 332
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 185/293 (63%), Gaps = 21/293 (7%)
Query: 227 LFLNEAINWLNIEN-----ERIN-GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTES 280
+ L E+I L I N + +N GI++D T+G+GGHS ++L L ++ +L DKD ++
Sbjct: 9 VLLRESIEALLIRNSCDGKQYLNSGIFVDGTYGRGGHSIELLNNLDERSKLFVFDKDPDA 68
Query: 281 VSLGN--KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFL 338
++ + + D R +IHN F ++ L NI K+DGI+ DLG+SS Q+++ RGFSFL
Sbjct: 69 ITAASLLSLRDPRVHVIHNSFVRMEEELLSRNINKVDGIMLDLGVSSPQLDDSARGFSFL 128
Query: 339 LDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITR 398
+GPLDMRMD T+G++ +KWL A I+KVI DYG+ERFA KIA+EIV R I PI
Sbjct: 129 HEGPLDMRMDTTKGVTVAKWLEKADIEEIRKVIFDYGDERFATKIAREIVSRRKIRPIRT 188
Query: 399 TKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVI 458
T +LV+ +L + + K+PATRTFQA+RI+IN EL+ LS+A K L GR+V I
Sbjct: 189 TTELVKCVLSVVHKTETGKHPATRTFQALRIHINNELEELSLAFPSFIKLLKPYGRLVAI 248
Query: 459 SFHSLEDRIVKNFI-------NFNTKIPHIDRRLPIYNYLFEPKMKFLARCKP 504
SFHSLEDRIVK I +F +K+P + LP +P ++ L R P
Sbjct: 249 SFHSLEDRIVKRMIRNFELPSDFYSKLPLTESELP------KPILRSLGRIFP 295
>gi|395497073|ref|ZP_10428652.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas sp. PAMC 25886]
Length = 315
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGSDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAQFIATAPHEEITRVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRYEAFVPKIKIHGKAQFASEAELK 298
>gi|344941244|ref|ZP_08780532.1| Ribosomal RNA small subunit methyltransferase H [Methylobacter
tundripaludum SV96]
gi|344262436|gb|EGW22707.1| Ribosomal RNA small subunit methyltransferase H [Methylobacter
tundripaludum SV96]
Length = 308
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 176/265 (66%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVS---L 283
+ EA+ L I+ +G+Y+D TFG+GGHS IL LG GRL+A D+D ++++
Sbjct: 6 VMFAEALQQLAIKE---DGVYLDCTFGRGGHSQGILNLLGPSGRLLAFDRDLDAINSDYA 62
Query: 284 GNKITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+ D RF + H F+ L+ I++ + K+DGIL DLG+SS Q++N RGFSFL DGP
Sbjct: 63 QAMLEDKRFKLKHTHFSALENIVVSEGLAGKVDGILMDLGVSSPQLDNPERGFSFLRDGP 122
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL 402
LDMRMD G++A +WLA E + KV+ +YGEERFA++IA+ IV R+++PIT T++L
Sbjct: 123 LDMRMDGNSGVTAEQWLAGVDEKALVKVLFEYGEERFARRIARAIVEKRAVSPITTTREL 182
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
++I + G +++K+PATR+FQAIRI IN EL L L+ + L GR+VVISFHS
Sbjct: 183 AKLIEDVVPGKEKHKHPATRSFQAIRIEINSELDELKAVLQQSARILKPGGRLVVISFHS 242
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDRIVK FI + + +LPI
Sbjct: 243 LEDRIVKRFIRAESGAKYNPGKLPI 267
>gi|90407776|ref|ZP_01215954.1| S-adenosyl-methyltransferase [Psychromonas sp. CNPT3]
gi|90311136|gb|EAS39243.1| S-adenosyl-methyltransferase [Psychromonas sp. CNPT3]
Length = 313
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 179/280 (63%), Gaps = 6/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L I+ E GIYIDATFG+GGHS IL++LG KGRLIAID+D ++
Sbjct: 7 VLLDEAVNGLAIKEE---GIYIDATFGRGGHSRHILKQLGPKGRLIAIDRDPRAIVTAEL 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D+RFSIIH F++L +K+ + +IDG+L DLG+SS Q++ RGFSF+ DGPL
Sbjct: 64 LMQEDARFSIIHGPFSDLANYVKELGLAGQIDGVLLDLGVSSPQLDEAERGFSFMRDGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T GISA++WLA A +I V++ +GEE+FA +IA+ IV R TP RT L
Sbjct: 124 DMRMDPTTGISAAQWLAKADVEDISWVLKTFGEEKFAYRIARAIVADREETPFLRTLDLA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I + ++ K+PATR+FQAIRIY+N EL+ + L L I G + VISFHSL
Sbjct: 184 NLISRLCPKREKKKHPATRSFQAIRIYVNSELEEIHKVLDGALDILAIDGLLSVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
EDRIVK FI K LP+ + + A+ K
Sbjct: 244 EDRIVKRFIRKQEKGREYPPGLPLTDAQMQSGKTMKAQGK 283
>gi|399008623|ref|ZP_10711093.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM17]
gi|425901426|ref|ZP_18878017.1| S-adenosyl-methyltransferase MraW [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883119|gb|EJK99605.1| S-adenosyl-methyltransferase MraW [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398116059|gb|EJM05830.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM17]
Length = 315
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLDGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|319897403|ref|YP_004135600.1| s-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus influenzae F3031]
gi|317432909|emb|CBY81275.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Haemophilus influenzae F3031]
Length = 321
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 178/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSFNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDLRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY------RSITPITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + S ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNSTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|16273056|ref|NP_439288.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae Rd KW20]
gi|145630229|ref|ZP_01786011.1| S-adenosyl-methyltransferase [Haemophilus influenzae R3021]
gi|260580214|ref|ZP_05848044.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae RdAW]
gi|260581821|ref|ZP_05849617.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae NT127]
gi|1175483|sp|P45057.1|RSMH_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|1574685|gb|AAC22785.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|144984510|gb|EDJ91933.1| S-adenosyl-methyltransferase [Haemophilus influenzae R3021]
gi|260093498|gb|EEW77431.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae RdAW]
gi|260095014|gb|EEW78906.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae NT127]
Length = 321
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 177/268 (66%), Gaps = 10/268 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDLRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 252 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 279
>gi|388470276|ref|ZP_10144485.1| S-adenosyl-methyltransferase MraW [Pseudomonas synxantha BG33R]
gi|388006973|gb|EIK68239.1| S-adenosyl-methyltransferase MraW [Pseudomonas synxantha BG33R]
Length = 315
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|386312135|ref|YP_006008300.1| S-adenosyl-methyltransferase MraW [Shewanella putrefaciens 200]
gi|319424760|gb|ADV52834.1| S-adenosyl-methyltransferase MraW [Shewanella putrefaciens 200]
Length = 313
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS +IL+RLG GRLIAID+D +++ +
Sbjct: 10 VLLAETVGGLNIKD---DGIYIDGTFGRGGHSRQILQRLGDNGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+D RF I+H F +L D + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FSDDPRFQIVHGGFGQLADYVEDLGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I++ + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIVRITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALAVLAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPYGLPI 269
>gi|157963630|ref|YP_001503664.1| S-adenosyl-methyltransferase MraW [Shewanella pealeana ATCC 700345]
gi|262826529|sp|A8H992.1|RSMH_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157848630|gb|ABV89129.1| S-adenosyl-methyltransferase MraW [Shewanella pealeana ATCC 700345]
Length = 315
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 174/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI R +GIYID TFG+GGHS K+LE LG GRLIAID+D ++++ +
Sbjct: 10 VLLAETVAGLNI---RPDGIYIDGTFGRGGHSRKVLEELGPNGRLIAIDRDPQAIAAAEQ 66
Query: 287 I-TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
DSRF I+H F +L ++ +K +IDG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FKDDSRFQIVHGGFGQLADYVEDLGLKGQIDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ ++ IA+ I R P RTK L +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEEKNSRHIARCIAADREKAPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELEQIDQALEGALAVLAPEGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI N++ + LPI
Sbjct: 247 DRMVKRFIRRNSQGESVPHGLPI 269
>gi|262826550|sp|B8CM48.1|RSMH_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|212556518|gb|ACJ28972.1| S-adenosyl-methyltransferase mraW [Shewanella piezotolerans WP3]
Length = 318
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 177/263 (67%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI R +GIYID TFG+GGHS K+LE+LG GRLIAID+D +++ +
Sbjct: 10 VLLTETVAGLNI---REDGIYIDGTFGRGGHSRKVLEQLGPNGRLIAIDRDPQAILAAEQ 66
Query: 287 I-TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
DSRF I+H F +L +++ +K KIDG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FKDDSRFQIVHGGFGQLAQYVEELGLKGKIDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++W+A A ++ V + YGEE+ ++ IA+ I R TP RTK+L +
Sbjct: 127 MRMDNSQGQTAAQWIARAEIEDMAWVFKTYGEEKNSRHIARCIAADREKTPFLRTKELAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELEQIDQALEGALTVLAPEGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI +++ + LPI
Sbjct: 247 DRMVKRFIRRHSQGESVPHGLPI 269
>gi|323491037|ref|ZP_08096229.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio brasiliensis LMG
20546]
gi|323314701|gb|EGA67773.1| 16S rRNA m(4)C1402 methyltranserfase [Vibrio brasiliensis LMG
20546]
Length = 316
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 176/266 (66%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS IL +L + GRL +ID+D ++++ K
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRTILSKLDENGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + Y+ + K+DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAEYAADYDLVGKVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ ++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHVRRIAKAIVAYRENEENEPLTRTSQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALKGAASILAPQGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPM 272
>gi|117922183|ref|YP_871375.1| S-adenosyl-methyltransferase MraW [Shewanella sp. ANA-3]
gi|262826555|sp|A0L1Q0.1|RSMH_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|117614515|gb|ABK49969.1| S-adenosyl-methyltransferase MraW [Shewanella sp. ANA-3]
Length = 313
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS ++L+RLG+ GRLIAID+D +++ +
Sbjct: 10 VLLEETVGGLNIKD---DGIYIDGTFGRGGHSRQVLQRLGENGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALTILAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPHGLPI 269
>gi|357416243|ref|YP_004929263.1| 16S rRNA m(4)C1402 methyltransferase [Pseudoxanthomonas spadix
BD-a59]
gi|355333821|gb|AER55222.1| 16S rRNA m(4)C1402 methyltransferase [Pseudoxanthomonas spadix
BD-a59]
Length = 375
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 177/275 (64%), Gaps = 13/275 (4%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCF 299
+ +GIY+D TFG+GGH+ +LE+LG GRL+ +DKD E+++ + + D+R S+ + F
Sbjct: 24 KADGIYLDGTFGRGGHARGVLEQLGPGGRLLLMDKDPEAIAHAHAVFDGDARVSVQRDSF 83
Query: 300 TELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWL 359
EL +DG+L DLG+SS Q++ RGFSF DGPLDMRMD G SA++WL
Sbjct: 84 AEL--AQWDATAGGLDGVLLDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGQSAAQWL 141
Query: 360 ANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIIL----KSIRGNKR 415
A A E I V+ +YG+ER +++IA+ IV R+ TP+TRT QL E+I ++ G +
Sbjct: 142 ARADEGEIADVLFNYGQERMSRRIARTIVARRAETPLTRTAQLAELIASVMPRARPGTDK 201
Query: 416 YK-NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF 474
+ +PATR+FQAIRI+IN+EL +L L +L + GR+ VISFHSLEDRIVK FI
Sbjct: 202 SRIHPATRSFQAIRIHINRELADLETGLDAALARLKVGGRLAVISFHSLEDRIVKRFIAG 261
Query: 475 NTKIPHIDRRLPIYNYLFEPKMKFLA---RCKPKK 506
+ K P +RRLP+ F P +K + R P++
Sbjct: 262 HAKAPAGNRRLPVAQD-FIPALKIVGDAVRAGPEE 295
>gi|440738890|ref|ZP_20918412.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas fluorescens
BRIP34879]
gi|447915289|ref|YP_007395857.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas poae RE*1-1-14]
gi|440380262|gb|ELQ16829.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas fluorescens
BRIP34879]
gi|445199152|gb|AGE24361.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas poae RE*1-1-14]
Length = 315
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGSDGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R I P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERREIQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|336313072|ref|ZP_08568015.1| rRNA small subunit methyltransferase H [Shewanella sp. HN-41]
gi|335863192|gb|EGM68350.1| rRNA small subunit methyltransferase H [Shewanella sp. HN-41]
Length = 313
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 175/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS ++L+RLG GRLIAID+D +++ +
Sbjct: 10 VLLEETVGGLNIKD---DGIYIDGTFGRGGHSRQVLQRLGTNGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGETAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALTVLAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPHGLPI 269
>gi|389873146|ref|YP_006380565.1| 16S rRNA m(4)C1402 methyltransferase [Advenella kashmirensis WT001]
gi|388538395|gb|AFK63583.1| 16S rRNA m(4)C1402 methyltransferase [Advenella kashmirensis WT001]
Length = 359
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 174/261 (66%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+G+++D TFG+GGHS +L L K RL DKD ++ +++ D+R ++IH+ F+
Sbjct: 42 DGVFVDGTFGRGGHSRLLLSALSKSARLFVFDKDPRAIEAAMQLSREDARVTVIHDGFST 101
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L + + +IDG++ DLG+SS QI+ RGFSF+ DGPLDMRMD +RG +A++WLA
Sbjct: 102 MVPALAEQGVTQIDGVMMDLGVSSPQIDEAARGFSFMRDGPLDMRMDTSRGQTAAQWLAQ 161
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ N+K+VI+ YGEERFA +IAK I R +P+ T +L E++ +R ++ ++PAT
Sbjct: 162 ASVDNMKEVIKYYGEERFAFQIAKAIDARRQSSPLCTTLELAELVANVVRTREKGQHPAT 221
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRI+IN+ELK L+ L K L +GR+ VISFHSLEDR+VK + +P
Sbjct: 222 RTFQAIRIHINEELKELADTLASILKVLAPQGRMAVISFHSLEDRMVKQCFAAASSLPPE 281
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
R+P+ + + EP +K L R
Sbjct: 282 LARMPLRESEMPEPVLKNLGR 302
>gi|120597213|ref|YP_961787.1| S-adenosyl-methyltransferase MraW [Shewanella sp. W3-18-1]
gi|146291586|ref|YP_001182010.1| S-adenosyl-methyltransferase MraW [Shewanella putrefaciens CN-32]
gi|262826531|sp|A4Y2M8.1|RSMH_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826576|sp|A1REY8.1|RSMH_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|120557306|gb|ABM23233.1| S-adenosyl-methyltransferase MraW [Shewanella sp. W3-18-1]
gi|145563276|gb|ABP74211.1| S-adenosyl-methyltransferase MraW [Shewanella putrefaciens CN-32]
Length = 313
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS +IL+RLG GRLIAID+D +++ +
Sbjct: 10 VLLAETVGGLNIKD---DGIYIDGTFGRGGHSRQILQRLGDNGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+D RF I+H F +L D + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FSDDPRFQIVHGGFGQLADYVEDLGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA+A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGQTAAQWLAHAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELDQIDQALEGALAVLAPQGRLSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGESVPYGLPI 269
>gi|398898342|ref|ZP_10648262.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM50]
gi|398184396|gb|EJM71849.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM50]
Length = 315
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V + YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKQYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQSASEAELK 298
>gi|332528826|ref|ZP_08404800.1| 16S rRNA m(4)C1402 methyltranserfase [Hylemonella gracilis ATCC
19624]
gi|332041685|gb|EGI78037.1| 16S rRNA m(4)C1402 methyltranserfase [Hylemonella gracilis ATCC
19624]
Length = 320
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 182/292 (62%), Gaps = 20/292 (6%)
Query: 227 LFLNEAINWL---------NIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKD 277
+ LNEA++ L +++ E +G Y+DATFG+GGHS +L RL + RL A DKD
Sbjct: 10 VLLNEAVDALLNRPVELPDSLKTE--DGHYVDATFGRGGHSRLLLSRLAPQARLTAFDKD 67
Query: 278 TESVSLGNKI--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGF 335
++V+ KI +D+RFSI H F L+ + + G+L DLGISS QI++ RGF
Sbjct: 68 PQAVAEAQKIVQSDARFSIRHQGFAHLN----ELPTQSCQGVLMDLGISSPQIDDPARGF 123
Query: 336 SFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-T 394
SF +GPLDMRMD TRG S ++WL +A I +VI+DYGEERFA IAK IV R
Sbjct: 124 SFRAEGPLDMRMDPTRGRSVAEWLMSAEVREIAEVIRDYGEERFAGPIAKAIVERRQAGR 183
Query: 395 PITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGR 454
P+ T +L +++ +++ + +NPATRTFQA RI+IN EL+ L AL+ L GR
Sbjct: 184 PLATTAELAQLVAGAVKTREPGQNPATRTFQAFRIFINAELEELQAALEASLDVLQTGGR 243
Query: 455 IVVISFHSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKK 506
+VVISFHSLEDRIVK FI + + + DRR P + +++ + R +P +
Sbjct: 244 LVVISFHSLEDRIVKQFIARHAREVY-DRRAP-FAAPTPTRLRAVERVRPSE 293
>gi|90416328|ref|ZP_01224260.1| S-adenosyl-methyltransferase [gamma proteobacterium HTCC2207]
gi|90332053|gb|EAS47267.1| S-adenosyl-methyltransferase [marine gamma proteobacterium
HTCC2207]
Length = 309
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EAI+ + + +G YID TFG+GGH+ ++L RL + GR++AIDKD +++ G K
Sbjct: 12 VLLHEAIDAVVTDP---DGFYIDGTFGRGGHTAELLSRLSEHGRVLAIDKDPQAIEAGRK 68
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
DSR +I+H F ++ +++ G+L DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 69 RFADDSRLTIVHGSFADMG---DWREGREVTGVLLDLGVSSPQLDQAERGFSFMRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G+SA++W+ A E +I +VI+++GEERFAK++A +V R + PITRT QL +
Sbjct: 126 MRMDTSSGLSAAEWIDTAAEADIAQVIKEFGEERFAKRMAAAVVRERDLAPITRTVQLAK 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ + +R K+PAT+ FQAIRI+IN+EL +L L+ L I GR+VVISFHSLE
Sbjct: 186 ILADAHPAWERGKHPATKAFQAIRIFINRELDDLVALLEQVIDLLKIDGRLVVISFHSLE 245
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC-KPK 505
DR VK FI + + + LP+ + ++K + + KP+
Sbjct: 246 DRKVKRFIRDQERGIKLPKNLPVRDVERGVRLKKIGKAIKPE 287
>gi|426411409|ref|YP_007031508.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. UW4]
gi|426269626|gb|AFY21703.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. UW4]
Length = 315
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + ++ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVTERGLAGRVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|194290938|ref|YP_002006845.1| hypothetical protein RALTA_A2859 [Cupriavidus taiwanensis LMG
19424]
gi|193224773|emb|CAQ70784.1| conserved hypothetical protein, DUF34 COG0327 [Cupriavidus
taiwanensis LMG 19424]
Length = 248
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L++ +Y+DYCPNGLQV+GRS I +VTGVTASL L+ A++ ADAILVHHGYFWK E++
Sbjct: 14 LDVSRYKDYCPNGLQVQGRSEITHVVTGVTASLALVDAAIEAGADAILVHHGYFWKSEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL++L+ INL+A+HLPLD HP+ GNNAQL L F+ T RFS + +GW G
Sbjct: 74 RVVGQKHARLKRLLGADINLFAFHLPLDNHPEFGNNAQLGLQLGFTPTGRFSDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + L H+ +G++P+ IG+ + I +GWCTG AQ A+
Sbjct: 134 TL--------PAPMPLSALAAHVGGVLGREPLAIGEPGQMIRTVGWCTGGAQGYFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AY+SGE+SE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDAYLSGEVSEQTTHLARESGVAYLAAGHHATERY 222
>gi|398869804|ref|ZP_10625161.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM74]
gi|398210216|gb|EJM96868.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM74]
Length = 315
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKIHGKAQTASDAELK 298
>gi|398835261|ref|ZP_10592626.1| dinuclear metal center protein, YbgI/SA1388 family [Herbaspirillum
sp. YR522]
gi|398216836|gb|EJN03377.1| dinuclear metal center protein, YbgI/SA1388 family [Herbaspirillum
sp. YR522]
Length = 254
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 160/219 (73%), Gaps = 6/219 (2%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
+ LN +++DYCPNGLQVEGRS I +V+GVTASL L++ A+D+ ADA+LVHHGYFW+GE
Sbjct: 16 QTLNAAQFKDYCPNGLQVEGRSRIASVVSGVTASLALLEAALDLKADAVLVHHGYFWRGE 75
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGW 625
+ +VGI+++RL L+ N INL+AYHLPLD HP+LGNNAQLA+ L+ RF N++GW
Sbjct: 76 DPRVVGIRQRRLRLLLANDINLFAYHLPLDAHPQLGNNAQLARQLDLLPEGRFGDNDLGW 135
Query: 626 IGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDA 685
G R I T DL I +++G+ P++IGD + + +I WCTGAAQ +L DA
Sbjct: 136 WG------RSGMAAIKTAADLAALIEKRLGRAPLLIGDPQQPLGQIAWCTGAAQGMLDDA 189
Query: 686 INEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
I G AYISGEISE TV+++RE+G Y AAGHHATERY
Sbjct: 190 IAAGANAYISGEISEPTVHLARETGTVYIAAGHHATERY 228
>gi|398951315|ref|ZP_10673963.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM33]
gi|398156702|gb|EJM45116.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM33]
Length = 315
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLETGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEPK+K + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPKIKVHGKAQTASDAELK 298
>gi|330811587|ref|YP_004356049.1| S-adenosyl-methyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699143|ref|ZP_17673633.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens Q8r1-96]
gi|327379695|gb|AEA71045.1| S-adenosyl-methyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387997261|gb|EIK58591.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens Q8r1-96]
Length = 315
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPGGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAELASEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L + L+ + L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEVGLEAALEALEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ TK ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLTKGEADNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|427825297|ref|ZP_18992359.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica Bbr77]
gi|410590562|emb|CCN05653.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica Bbr77]
Length = 364
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 171/261 (65%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+GI++D TFG+GGHS +L RLG + RL+ DKD +++++ ++ D R ++H F
Sbjct: 44 HGIFVDGTFGRGGHSRALLARLGAQARLVVFDKDPQAIAVARELAAGDGRVEVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I+++DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELTARGIEQVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T QL E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAACRATRPLHTTLQLAECVAGAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ AL L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARALASALDLLGPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + L +P ++ L +
Sbjct: 284 HARLPLRESELPQPLVRSLGK 304
>gi|451936660|ref|YP_007460514.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777583|gb|AGF48558.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 330
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 170/265 (64%), Gaps = 3/265 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN--KITDSRFSIIHNCFTE 301
+GI++D TFG+GGHS ++L L +L DKD +++ + + D R +IHN F +
Sbjct: 32 SGIFVDGTFGRGGHSMELLNNLDNNSKLFVFDKDPDAIKAADLLSLKDHRVHVIHNSFVK 91
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L NI K+DGI+ DLG+SS Q++N RGFSFL +GPLDMRMD TRGI+ KWL
Sbjct: 92 MKEELLSRNIDKVDGIMLDLGVSSPQLDNPCRGFSFLNEGPLDMRMDTTRGIALDKWLEK 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A +I+K+I DYGEERFA KIAKEIV R I PI T +L + + + +++ K+PAT
Sbjct: 152 ADIHDIRKIIFDYGEERFATKIAKEIVARRKIKPIQTTAELADCVSSVVYKSEKGKHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN EL+ LS+A + L GR+ VISFHSLEDRIVK I
Sbjct: 212 RTFQALRIYINNELEELSLAFPSFIELLKPYGRLAVISFHSLEDRIVKRMIRSFESPSDF 271
Query: 482 DRRLPIY-NYLFEPKMKFLARCKPK 505
RLP+ N L +P ++ L R P+
Sbjct: 272 YSRLPLMENELPKPIIRSLGRIFPE 296
>gi|388259723|ref|ZP_10136892.1| S-adenosyl-methyltransferase MraW [Cellvibrio sp. BR]
gi|387936449|gb|EIK43011.1| S-adenosyl-methyltransferase MraW [Cellvibrio sp. BR]
Length = 309
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 177/279 (63%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ L + +G Y+D TFG+GGHS IL++L GRL+ IDKD +++ N
Sbjct: 9 VLLNEAVEALVTDT---SGFYVDGTFGRGGHSGLILQQLALDGRLLGIDKDLAAIATANA 65
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+D+RF+I H F EL ++ + + K+ G+L DLG+SS Q++ RGFSF+ DGPL
Sbjct: 66 RFGSDARFAIAHGSFAELAALIDERGMTGKVTGVLLDLGVSSPQLDEAERGFSFMQDGPL 125
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG SA++W+ +A E I V++++GEERFAK++A+ I+ R P TRTK L
Sbjct: 126 DMRMDQTRGQSAAEWVNSAGEDEITWVLKEFGEERFAKRMARAIIVERQKQPFTRTKHLA 185
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I ++ ++ K+PATR FQAIRI +N EL +L L L GR+VVISFHSL
Sbjct: 186 EVIKEANPAWEKGKHPATRAFQAIRIQVNNELGDLESVLDQALTVLAPGGRLVVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDR+VK FI + + LPI + +M+ L +
Sbjct: 246 EDRVVKRFIRRQELGDPVPKGLPIRDDQLNKRMRSLGKA 284
>gi|113869347|ref|YP_727836.1| hypothetical protein H16_A3400 [Ralstonia eutropha H16]
gi|113528123|emb|CAJ94468.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 248
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +Y+DYCPNGLQV+GRS I IVTGVTASL L+ A++ ADAILVHHGYFWK E++
Sbjct: 14 LEVSRYKDYCPNGLQVQGRSEITHIVTGVTASLALVDAAIEAGADAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL++L+ +NL+A+HLPLD HP+ GNNAQL L F+ T RFS + +GW G
Sbjct: 74 RVVGQKHARLKRLLGADVNLFAFHLPLDNHPEFGNNAQLGLQLGFTPTGRFSDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + L H+ +G++P+ IG+ ++ I +GWCTG AQ A+
Sbjct: 134 TL--------PAPMPLSALAAHVGGVLGREPLAIGEPDQMIRTVGWCTGGAQGYFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AY+SGE+SE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDAYLSGEVSEQTTHLARESGVAYLAAGHHATERY 222
>gi|33593961|ref|NP_881605.1| S-adenosyl-methyltransferase MraW [Bordetella pertussis Tohama I]
gi|33598269|ref|NP_885912.1| S-adenosyl-methyltransferase MraW [Bordetella parapertussis 12822]
gi|33603180|ref|NP_890740.1| S-adenosyl-methyltransferase MraW [Bordetella bronchiseptica RB50]
gi|384205265|ref|YP_005591004.1| S-adenosyl-methyltransferase MraW [Bordetella pertussis CS]
gi|408416924|ref|YP_006627631.1| S-adenosyl-methyltransferase [Bordetella pertussis 18323]
gi|410421662|ref|YP_006902111.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica MO149]
gi|412341490|ref|YP_006970245.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica 253]
gi|427816190|ref|ZP_18983254.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica 1289]
gi|427818859|ref|ZP_18985922.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica D445]
gi|42558972|sp|Q7VUP6.1|RSMH_BORPE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42558973|sp|Q7W4A7.1|RSMH_BORPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42558974|sp|Q7WFR5.1|RSMH_BORBR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|33564035|emb|CAE43301.1| S-adenosyl-methyltransferase [Bordetella pertussis Tohama I]
gi|33566827|emb|CAE39042.1| S-adenosyl-methyltransferase [Bordetella parapertussis]
gi|33568811|emb|CAE34569.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica RB50]
gi|332383379|gb|AEE68226.1| S-adenosyl-methyltransferase MraW [Bordetella pertussis CS]
gi|401779094|emb|CCJ64577.1| S-adenosyl-methyltransferase [Bordetella pertussis 18323]
gi|408448957|emb|CCJ60643.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica MO149]
gi|408771324|emb|CCJ56124.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica 253]
gi|410567190|emb|CCN24761.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica 1289]
gi|410569859|emb|CCN17980.1| S-adenosyl-methyltransferase [Bordetella bronchiseptica D445]
Length = 364
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 171/261 (65%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+G+++D TFG+GGHS +L RLG + RL+ DKD +++++ ++ D R ++H F
Sbjct: 44 HGVFVDGTFGRGGHSRALLARLGAQARLVVFDKDPQAIAVARELAAGDGRVEVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I+++DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELTARGIEQVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T QL E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAACRATRPLHTTLQLAECVAGAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ AL L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARALASALDLLGPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + L +P ++ L +
Sbjct: 284 HARLPLRESELPQPLVRSLGK 304
>gi|451812427|ref|YP_007448881.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451778329|gb|AGF49277.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 327
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/252 (50%), Positives = 167/252 (66%), Gaps = 9/252 (3%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN--KITDSRFSIIHNCFTE 301
+GI++D TFG+GGHS ++L+ L + +L DKD +++ N + D+R +IH+ F +
Sbjct: 32 SGIFVDGTFGRGGHSIELLDNLDDRSKLFVFDKDPDAIKSANLLSLKDNRVQVIHSSFVK 91
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L NI K+DGI+ DLG+SS Q++N RGFSFL GPLDMRMD TRGIS +KWL
Sbjct: 92 MKEELLSRNIDKVDGIMLDLGVSSPQLDNPCRGFSFLHKGPLDMRMDTTRGISVAKWLEK 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A +I+KVI +YGEERFA KIAKEIV R I PI T LV+ + + N++ K+PAT
Sbjct: 152 ADLNDIRKVIFEYGEERFATKIAKEIVARRKIKPICTTTDLVDCVSSVVHKNEKGKHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFI-NFN----- 475
RTFQA+RIYIN EL+ LS + + L GR+ VISFHSLEDRIVK I NF
Sbjct: 212 RTFQALRIYINNELEELSSSFPSFVELLKPYGRLAVISFHSLEDRIVKRMIRNFEYPSDV 271
Query: 476 -TKIPHIDRRLP 486
K+P ++ LP
Sbjct: 272 YHKLPLMENELP 283
>gi|56459539|ref|YP_154820.1| S-adenosyl-methyltransferase MraW [Idiomarina loihiensis L2TR]
gi|68565448|sp|Q5R0L7.1|RSMH_IDILO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|56178549|gb|AAV81271.1| Predicted S-adenosylmethionine-dependent methyltransferase
[Idiomarina loihiensis L2TR]
Length = 315
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 177/263 (67%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I L + + G YIDATFG+GGH+ +L +LG R+IA+D+D E+++
Sbjct: 11 VLLEESIEALATDPQ---GTYIDATFGRGGHTRALLNQLGDDARVIALDQDPEAIAAAAA 67
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF IIH F+ L +L + +++ GILFDLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 68 FADDPRFQIIHTPFSNLQQVLDDLQLNRQVTGILFDLGVSSPQLDDAERGFSFMRDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T G +A++WL A + +I V+++YGEERFA++IA IV R P TRTKQL E
Sbjct: 128 MRMNTTSGETAAEWLNRAEKDDISWVLKEYGEERFARRIASAIVMDREKKPFTRTKQLAE 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + +++K+PATRTFQAIRI+IN+EL+ + AL+ L GR+VVISFHSLE
Sbjct: 188 MIARVSPVKEKHKHPATRTFQAIRIHINRELEQIEQALEASLSGLKEDGRLVVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI +++ + LP+
Sbjct: 248 DRLVKRFIRKHSEGKQLPPGLPV 270
>gi|336233243|ref|YP_004589989.1| S-adenosyl-dependent methyl transferase [Buchnera aphidicola
(Cinara tujafilina)]
gi|335345184|gb|AEH39730.1| S-adenosyl-dependent methyl transferase [Buchnera aphidicola
(Cinara tujafilina)]
Length = 306
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 179/262 (68%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ E I +L I+ + G Y+D TFG GGHS IL+ LG G+L +ID+D +S+ +G K
Sbjct: 6 VLTKEIIQYLKIKKD---GTYVDCTFGGGGHSKAILQELGVNGKLYSIDQDPQSIKIGKK 62
Query: 287 ITDSRFSIIHNCFTELDIILKKY-NIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I F+ ++ ILKK N KIDGIL DLGISS Q+N+ +RGFSF+ DGPLDM
Sbjct: 63 IKDSRFKIFLGKFSNIEKILKKEKNRDKIDGILLDLGISSIQLNSSIRGFSFMNDGPLDM 122
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RM+ GIS S+WL + I++VI+++GEE++AKKI++ I+ IT T +LV+I
Sbjct: 123 RMNPKSGISVSQWLKKTNQKTIEQVIKNFGEEKYAKKISRAIILQIKKKTITSTLELVQI 182
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I KSI ++K+PATRTFQA RIYINQE+ L LKI L+ +I +ISFHS+ED
Sbjct: 183 IKKSIPKYDKFKHPATRTFQAFRIYINQEINELHKILKIIINILHSGSKIAIISFHSIED 242
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNFI + P+I ++LPI
Sbjct: 243 RIVKNFIKNYSNYPNIPKKLPI 264
>gi|170728860|ref|YP_001762886.1| S-adenosyl-methyltransferase MraW [Shewanella woodyi ATCC 51908]
gi|262826580|sp|B1KKY5.1|RSMH_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|169814207|gb|ACA88791.1| S-adenosyl-methyltransferase MraW [Shewanella woodyi ATCC 51908]
Length = 313
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 177/263 (67%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI+ +GIYID TFG+GGHS ++L+ LG+ GRLIAID+D +++ +
Sbjct: 10 VLLTETVAGLNIKE---DGIYIDGTFGRGGHSREVLKHLGENGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI+H F +L +++ +K KIDG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDARFSIVHGGFGQLATYVEELGLKGKIDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A+ WLA A ++ V + YGEE+ ++ IA+ I R TP RTK+L +
Sbjct: 127 MRMDNSQGETAADWLARAEVEDMAWVFKTYGEEKNSRHIARCIAADREKTPFLRTKELAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARISKSKERNKHPATRVFQAIRIYINSELEQIDQALEGALTVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI +++ + LPI
Sbjct: 247 DRMVKRFIRRHSQGESVPHGLPI 269
>gi|192361777|ref|YP_001983393.1| S-adenosyl-methyltransferase MraW [Cellvibrio japonicus Ueda107]
gi|263445770|sp|B3PCM8.1|RSMH_CELJU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|190687942|gb|ACE85620.1| S-adenosyl-methyltransferase MraW [Cellvibrio japonicus Ueda107]
Length = 309
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 175/279 (62%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L E G YID TFG+GGHS IL+ L +GRL+AIDKD +++ +
Sbjct: 9 VLLGEAVEALVSNPE---GTYIDGTFGRGGHSALILQHLASEGRLLAIDKDLAAIATARE 65
Query: 287 --ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
TD+RF+I H+ F L ++ ++ + ++ GIL DLG+SS Q++ RGFSF+ DGPL
Sbjct: 66 KFATDARFAIAHDSFASLKNLAAERGLVGRVQGILLDLGVSSPQLDEAERGFSFMQDGPL 125
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG SA++W+ A+E I V+++YGEERFAK++A+ I+ R P RT L
Sbjct: 126 DMRMDQTRGPSAAEWVNTASEDEIAWVLREYGEERFAKRMARAIIAERQKRPFVRTGHLA 185
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ K+PATR FQAIRI +N+EL++L L L GR+VVISFHSL
Sbjct: 186 EVIKAANPAWEKGKHPATRAFQAIRIQVNRELEDLEAVLAQAVDVLAPGGRLVVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDR+VK FI + + + LP+ M+ L +
Sbjct: 246 EDRLVKRFIRQQEQGDPVPKGLPLREAQLNKTMRSLGKA 284
>gi|378952687|ref|YP_005210175.1| rRNA small subunit methyltransferase H [Pseudomonas fluorescens
F113]
gi|359762701|gb|AEV64780.1| rRNA small subunit methyltransferase H [Pseudomonas fluorescens
F113]
Length = 315
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSKLGPGGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L + L+ L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEVGLEAALDALEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ TK ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLTKGEADNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|160872354|ref|ZP_02062486.1| S-adenosyl-methyltransferase MraW [Rickettsiella grylli]
gi|159121153|gb|EDP46491.1| S-adenosyl-methyltransferase MraW [Rickettsiella grylli]
Length = 312
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 187/283 (66%), Gaps = 8/283 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E I L ++ +GIY+DATFG+GGH+ +IL+RL KGR IAIDKD +++ G +
Sbjct: 10 VLLTEVIENLVLDK---DGIYVDATFGRGGHAGQILQRLSDKGRCIAIDKDPAAMAFGIQ 66
Query: 287 I--TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I F++L + ++ I K+ GILFDLG+SS Q+ RGFSFL +GPL
Sbjct: 67 QWGHDKRFKIYQGSFSQLKTMAEREGVINKVSGILFDLGVSSPQLEKAERGFSFLREGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD GISA++WLA+A E I KV+++YGEER+AK+IA+ IV + + PI T QL
Sbjct: 127 DMRMDPLTGISAAEWLAHAKEKEIVKVLKNYGEERYAKRIARAIVEEQKLRPIVTTVQLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++ + R+K+PATRTFQAIRI IN EL++L+++L L GR++VISFHSL
Sbjct: 187 NVVKLAHPHWDRFKHPATRTFQAIRIQINNELEDLNVSLGQSIDVLKQGGRLLVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFE-PKMKFLAR-CKP 504
EDRIVK FI+ + ++LP ++ P++K + R KP
Sbjct: 247 EDRIVKRFIHQHAHEAVELKKLPFMPAEWKRPRLKKIGRGVKP 289
>gi|312959049|ref|ZP_07773568.1| S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas
fluorescens WH6]
gi|311286819|gb|EFQ65381.1| S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas
fluorescens WH6]
Length = 315
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG G+L+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RADGCYLDGTFGRGGHSRLILSQLGPGGKLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + ++ K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGAEVAERGMAGKVAGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG+SA++++A A I +V ++YGEERFA ++A+ +V R + P RT L
Sbjct: 129 DMRMDPTRGVSAAQFIATAPVEEIARVFKEYGEERFAGRMARAVVERRELQPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRRLVKGESDNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|263506479|sp|B0U504.2|RSMH_XYLFM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 313
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 192/309 (62%), Gaps = 24/309 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ ++ D R I H F
Sbjct: 20 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERVFSCDPRVVIRHGSFA- 78
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 79 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 136
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I +V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 137 VSEREIAEVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKSGACKSR 196
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ +
Sbjct: 197 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHA 256
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 257 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVL--RV 302
Query: 537 TASLDLIKT 545
LD+++
Sbjct: 303 AEKLDVLEA 311
>gi|410471653|ref|YP_006894934.1| S-adenosyl-methyltransferase [Bordetella parapertussis Bpp5]
gi|408441763|emb|CCJ48258.1| S-adenosyl-methyltransferase [Bordetella parapertussis Bpp5]
Length = 364
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 171/261 (65%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+GI++D TFG+GGHS +L RLG + RL+ DKD +++++ ++ D R ++H F
Sbjct: 44 HGIFVDGTFGRGGHSRALLARLGAQARLVVFDKDLQAIAVARELAAGDGRVEVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I+++DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELTARGIEQVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ ++++I DYGEERFA ++AK I R+ P+ T QL E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREIIADYGEERFAFQVAKAIAACRATRPLHTTLQLAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ AL L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARALASALDLLGPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + L +P ++ L +
Sbjct: 284 HARLPLRESELPQPLVRSLGK 304
>gi|358451439|ref|ZP_09161873.1| S-adenosyl-methyltransferase MraW [Marinobacter manganoxydans
MnI7-9]
gi|357224672|gb|EHJ03203.1| S-adenosyl-methyltransferase MraW [Marinobacter manganoxydans
MnI7-9]
Length = 327
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 175/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A+++L + +G Y+D TFG+GGHS IL RLG RL+ IDKD E++ +
Sbjct: 18 VLLDSAVDYLVNDP---DGNYVDGTFGRGGHSRLILGRLGPSARLLGIDKDPEAIRAAKE 74
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+RF H F EL + + ++G+L DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 75 LETQDNRFHSFHGSFAELGAAVVGQGWQTVNGVLLDLGVSSPQLDDASRGFSFMRDGPLD 134
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + SA++WLA A E +I VI YGEE+F+++IA+ +V R P+ T+QL E
Sbjct: 135 MRMNTEQSPSAAEWLATAGESDIANVIFRYGEEKFSRRIARLLVERRQEAPVETTRQLAE 194
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ +++K+PATRTFQAIRI+IN+EL++L + LK L GR+VVISFHSLE
Sbjct: 195 LVSEAVPKKEKHKHPATRTFQAIRIFINRELEDLEVGLKSAVDHLAPGGRLVVISFHSLE 254
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ + P + + +P+
Sbjct: 255 DRLVKRFMRDLARGPQLPKGVPV 277
>gi|260775374|ref|ZP_05884271.1| S-adenosyl-methyltransferase MraW [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608555|gb|EEX34720.1| S-adenosyl-methyltransferase MraW [Vibrio coralliilyticus ATCC
BAA-450]
Length = 316
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 179/266 (67%), Gaps = 8/266 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +G YID TFG+GGHS +IL +LG++GRL +ID+D ++++
Sbjct: 10 VLLHESIDGLAI---KPDGTYIDGTFGRGGHSRQILSQLGEQGRLFSIDRDPQAIAEAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+IIH F+ + ++ + ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFTIIHGPFSGMAKYAEERGLVGQVDGVLLDLGVSSPQLDDAERGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GI S+WL A +I VI+++GE++ A++IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGIPVSQWLMEADLDDITWVIREFGEDKHARRIAKAIVAYRENEENEPLTRTGQL 186
Query: 403 VEIILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I + + K K+PATR+FQA RIYIN EL+ + ALK L +GR+ VISFH
Sbjct: 187 AKLISDAAPKSFKEKKHPATRSFQAFRIYINSELEEIDTALKGAASILAPEGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPI 487
SLEDR+VK FI +K P + +P+
Sbjct: 247 SLEDRMVKRFIRKESKGPEVPHGIPM 272
>gi|385330297|ref|YP_005884248.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Marinobacter adhaerens HP15]
gi|311693447|gb|ADP96320.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Marinobacter adhaerens HP15]
Length = 327
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 175/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A+++L + +G Y+D TFG+GGHS IL RLG RL+ IDKD E++ +
Sbjct: 18 VLLDSAVDYLVNDP---DGYYVDGTFGRGGHSRLILGRLGPSARLLGIDKDPEAIRAAKE 74
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+RF H F EL + + ++G+L DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 75 LEAQDNRFHSFHGSFAELGAAVVGQGWQTVNGVLLDLGVSSPQLDDASRGFSFMRDGPLD 134
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + SA++WLA A E +I VI YGEE+F+++IA+ +V R P+ T+QL E
Sbjct: 135 MRMNTEQSPSAAEWLATADESDIANVIFRYGEEKFSRRIARLLVERRQEAPVETTRQLAE 194
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ +++ +++K+PATRTFQAIRI+IN+EL++L + L+ L GR+VVISFHSLE
Sbjct: 195 LVSEAVPKKEKHKHPATRTFQAIRIFINRELEDLEVGLQSAVDHLAPGGRLVVISFHSLE 254
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ + P + + +P+
Sbjct: 255 DRLVKRFMRDLARGPQLPKGVPV 277
>gi|54310311|ref|YP_131331.1| S-adenosyl-methyltransferase MraW [Photobacterium profundum SS9]
gi|50402223|sp|P62475.1|RSMH_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|46914752|emb|CAG21529.1| putative S-adenosylmethionine-dependent methyltransferaseinvolved
in cell envelope biogenesis [Photobacterium profundum
SS9]
Length = 315
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 181/265 (68%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+++ L I + +GIYID TFG+GGHS IL LG+ GRL ID+D ++++
Sbjct: 10 VLLHESVDGLAI---KPDGIYIDGTFGRGGHSRLILSHLGENGRLYGIDRDPQAIAEAQT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + +++ + I ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSGMAQYMEERDLIGRVDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GISA++WLA A +I V++++GEERFAK+IA+ IV +R P+TRTK+L
Sbjct: 127 RMDPTSGISAAEWLAEAEADDIAWVLKEFGEERFAKRIARGIVEHRENPDKKPLTRTKEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I ++K+PATR+FQAIRIYIN EL + AL K L +GR+ VISFHS
Sbjct: 187 AALISDVSPFRDKHKHPATRSFQAIRIYINSELDEIETALNGAVKVLAPQGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDR+VK FI N+K P + P+
Sbjct: 247 LEDRMVKRFIRKNSKGPEVPAGFPL 271
>gi|171057205|ref|YP_001789554.1| S-adenosyl-methyltransferase MraW [Leptothrix cholodnii SP-6]
gi|263456313|sp|B1XY20.1|RSMH_LEPCP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|170774650|gb|ACB32789.1| S-adenosyl-methyltransferase MraW [Leptothrix cholodnii SP-6]
Length = 325
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 187/283 (66%), Gaps = 10/283 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV----S 282
+ L+EA++ L +R G+Y+D T+G+GGHS ILERL GRLIAID+D E++ S
Sbjct: 14 VLLHEAVDALV---QRPAGVYLDGTYGRGGHSRLILERLDPAGRLIAIDRDPEALANARS 70
Query: 283 LGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+I D RFSI H F E + +L + + ++DG+L DLGISS QI+N RGFSF DGP
Sbjct: 71 GETRIDDPRFSIHHARFAEFESVLDEAGVGQLDGLLLDLGISSPQIDNPERGFSFRFDGP 130
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQ 401
LDMRMD TRG SA+++LA+A IK+V++DYGEERFA +AK IV R P+ RT +
Sbjct: 131 LDMRMDPTRGQSAAEFLASAPFERIKEVVRDYGEERFADAVAKAIVARREEGRPVQRTAE 190
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
L ++ +++ +R ++PATRTFQA+RI +N EL+ + L +L GR+ VI+FH
Sbjct: 191 LAALVAGAVKTRERGQDPATRTFQALRILVNAELEEVEQGLNRALARLAPGGRLAVIAFH 250
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKP 504
SLEDRIVK FI + + + DRR+P Y M+ +AR KP
Sbjct: 251 SLEDRIVKTFIARHAREVY-DRRMP-YATPAPLLMRAVARIKP 291
>gi|339327431|ref|YP_004687124.1| hypothetical protein CNE_1c33400 [Cupriavidus necator N-1]
gi|338167588|gb|AEI78643.1| protein UPF0135 [Cupriavidus necator N-1]
Length = 248
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +Y+DYCPNGLQV+GRS + +VTGVTASL L+ A++ ADAILVHHGYFWK E++
Sbjct: 14 LEVSRYKDYCPNGLQVQGRSEVTHVVTGVTASLALVDAAIEAGADAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL++L+ +NL+A+HLPLD HP+ GNNAQL L F+ T RFS + +GW G
Sbjct: 74 RVVGQKHARLKRLLGADVNLFAFHLPLDNHPEFGNNAQLGLQLGFTPTGRFSDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + L H+ +G++P+ IG+ ++ I +GWCTG AQ A+
Sbjct: 134 TL--------PAPMPLSALAAHVGGVLGREPLAIGEPDQMIRTVGWCTGGAQGYFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AY+SGE+SE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDAYLSGEVSEQTTHLARESGVAYLAAGHHATERY 222
>gi|145635580|ref|ZP_01791278.1| S-adenosyl-methyltransferase [Haemophilus influenzae PittAA]
gi|229844915|ref|ZP_04465053.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 6P18H1]
gi|145267142|gb|EDK07148.1| S-adenosyl-methyltransferase [Haemophilus influenzae PittAA]
gi|229812296|gb|EEP47987.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae 6P18H1]
Length = 320
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 178/268 (66%), Gaps = 11/268 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSN-GRLIAVDRDPRAIAEAHK 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I DSRF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 71 IQDSRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 130
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 131 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNGTEFLSRT 190
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 191 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 250
Query: 460 FHSLEDRIVKNFINFNTKIPHIDRRLPI 487
FHSLEDR+VK+F+ +K I + LP+
Sbjct: 251 FHSLEDRMVKHFMKKQSKGEDIPKGLPL 278
>gi|163854995|ref|YP_001629293.1| S-adenosyl-methyltransferase MraW [Bordetella petrii DSM 12804]
gi|263445873|sp|A9I4S5.1|RSMH_BORPD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|163258723|emb|CAP41022.1| methyltransferase [Bordetella petrii]
Length = 363
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 174/263 (66%), Gaps = 3/263 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
G+++D TFG+GGHS ++L RLG + RL+ DKD +++++ N++ D+R +++H F
Sbjct: 44 RGVFVDGTFGRGGHSRELLRRLGPEARLVVFDKDPQAIAVANELAAGDARVTVVHGGFAA 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I+ IDG++ DLG+SS Q+++ RGFSF+ +GPLDMRMD TRG + + WLA
Sbjct: 104 MREELAARGIESIDGVMLDLGVSSPQLDDAGRGFSFMREGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLRTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ LS AL + L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELSRALASALELLAPGGRLAVISFHSLEDRMVKQCIAAAARPAVA 283
Query: 482 DRRLPIY-NYLFEPKMKFLARCK 503
RLP+ + L +P + L R +
Sbjct: 284 HARLPLRESELPQPLYRSLGRVQ 306
>gi|422321897|ref|ZP_16402941.1| hypothetical protein HMPREF0005_03394 [Achromobacter xylosoxidans
C54]
gi|317403205|gb|EFV83726.1| hypothetical protein HMPREF0005_03394 [Achromobacter xylosoxidans
C54]
Length = 255
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 152/224 (67%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGRS + I+TGVTAS L++ AV+ ADA+LVHHG+ W+ E+
Sbjct: 14 LQAARFKDYCPNGLQVEGRSEVRHIITGVTASEALLRIAVERGADAVLVHHGWMWRNEDR 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR-------FSK 620
++G ++ R+ + N +NLYAYHLPLD HP LGNNAQLA++L RR
Sbjct: 74 RVIGTRRTRMALALKNDLNLYAYHLPLDAHPTLGNNAQLARVLGLEPERRDDGSPRTCGP 133
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+N+ W+G +L T+ L I +++G++P+V+G+ ++ + I WCTG AQ
Sbjct: 134 DNLVWLGAAPDLP--------TLDQLAARIQQRLGRQPLVVGNPDQPVARIAWCTGGAQG 185
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+L DAI+ G TAYI+GE SEST ++++E+GVA+ AGHHATERY
Sbjct: 186 MLADAIDAGATAYITGEASESTFHLAQETGVAFLGAGHHATERY 229
>gi|120609507|ref|YP_969185.1| S-adenosyl-methyltransferase MraW [Acidovorax citrulli AAC00-1]
gi|263433318|sp|A1TKC3.1|RSMH_ACIAC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|120587971|gb|ABM31411.1| S-adenosyl-methyltransferase MraW [Acidovorax citrulli AAC00-1]
Length = 311
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/262 (48%), Positives = 168/262 (64%), Gaps = 9/262 (3%)
Query: 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI 304
G++IDATFG+GGHS +ILERLG GRL+A DKD E++ +ITD+RFSI H F L
Sbjct: 31 GVWIDATFGRGGHSRRILERLGPDGRLVAFDKDPEAIHEAARITDARFSIRHEGFRHLAD 90
Query: 305 ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATE 364
+ ++ GIL DLG+SS QI++ RGFSF DGPLDMRMD TRG S + WLA A
Sbjct: 91 LPERSAA----GILMDLGVSSPQIDSPERGFSFRFDGPLDMRMDTTRGESVADWLATADV 146
Query: 365 FNIKKVIQDYGEERFA-KKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRT 423
I +VI++YGEERFA P+ T +L +++ +++ + +NPATRT
Sbjct: 147 GQIAEVIREYGEERFAGPIAKAIAARRAERGPLRTTSELAQLVAGAVKTREAGQNPATRT 206
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDR 483
FQA+RI+IN EL+ L AL+ + L GR+ VISFHSLEDRIVK FI +++ + DR
Sbjct: 207 FQALRIFINAELEELQAALEASLRVLAPGGRLAVISFHSLEDRIVKQFIAQHSREVY-DR 265
Query: 484 RLPIYNYLFEP-KMKFLARCKP 504
R P +P ++K L R KP
Sbjct: 266 RAPFAAP--QPMRLKALDRIKP 285
>gi|71275129|ref|ZP_00651416.1| methyltransferase [Xylella fastidiosa Dixon]
gi|170731118|ref|YP_001776551.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa M12]
gi|71163938|gb|EAO13653.1| methyltransferase [Xylella fastidiosa Dixon]
gi|71729523|gb|EAO31631.1| methyltransferase [Xylella fastidiosa Ann-1]
gi|167965911|gb|ACA12921.1| S-adenosyl-methyltransferase [Xylella fastidiosa M12]
Length = 340
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 192/309 (62%), Gaps = 24/309 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ ++ D R I H F
Sbjct: 47 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERVFSCDPRVVIRHGSFA- 105
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 106 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I +V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 164 VSEREIAEVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKSGACKSR 223
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ +
Sbjct: 224 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHA 283
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 284 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVLR--V 329
Query: 537 TASLDLIKT 545
LD+++
Sbjct: 330 AEKLDVLEA 338
>gi|330446835|ref|ZP_08310486.1| S-adenosyl-methyltransferase MraW [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491026|dbj|GAA04983.1| S-adenosyl-methyltransferase MraW [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 315
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 182/265 (68%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+++ L I + +GIYID TFG+GGHS IL +LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLHESVDGLAI---KPDGIYIDGTFGRGGHSRLILSQLGENGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF IIH F+ ++ ++ + I ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFEIIHGPFSGMEKYMEARDLIGRVDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G SA++WLA A +I V++++GEERFAK+IA+ IV +R P+TRT+QL
Sbjct: 127 RMDPTSGQSAAEWLAEAEADDIAWVLKEFGEERFAKRIARGIVEHRENPEKEPLTRTRQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I + ++K+PATR+FQAIRIYIN EL + AL L +GR+ VISFHS
Sbjct: 187 ASLIAEVSPFKDKHKHPATRSFQAIRIYINSELDEIQTALNGAVNILAPEGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDR+VK FI +K P + LP+
Sbjct: 247 LEDRMVKRFIRKESKGPEVPAGLPL 271
>gi|348030108|ref|YP_004872794.1| S-adenosyl-methyltransferase MraW [Glaciecola nitratireducens
FR1064]
gi|347947451|gb|AEP30801.1| S-adenosyl-methyltransferase MraW [Glaciecola nitratireducens
FR1064]
Length = 312
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 175/266 (65%), Gaps = 5/266 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I LNI + +GIYIDATFG+GGHS IL++L KGRLIA+D+D ++ +
Sbjct: 11 VLLNESIAGLNI---KPDGIYIDATFGRGGHSAAILKQLSSKGRLIALDRDDTAIMSAQR 67
Query: 287 -ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
I D RFSI H F+ ++ ++ + + IDG+L D+G+SS Q+++ RGFSF DGPLD
Sbjct: 68 FIDDPRFSIHHVAFSNIEDVVNELELMCNIDGVLMDIGVSSPQLDDATRGFSFQKDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + GISA+ WL A+ I V++ YGEE+F K+IA ++ R I P+ T + +
Sbjct: 128 MRMDRSSGISAADWLNKASLEEITMVLKTYGEEKFGKRIAHAVLEQRVIKPLETTSEFAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I K++ ++K+PATR+FQ +RI+IN EL L+ L+ K L GR+ VISFHSLE
Sbjct: 188 LIDKAVPVKDKFKHPATRSFQGVRIFINGELDQLNQGLEGAVKVLKSGGRLAVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNY 490
DR+VK FI +K + +PI +
Sbjct: 248 DRVVKRFIRTMSKGKDVPHGMPIMQH 273
>gi|126172646|ref|YP_001048795.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS155]
gi|152998944|ref|YP_001364625.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS185]
gi|160873530|ref|YP_001552846.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS195]
gi|217971625|ref|YP_002356376.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS223]
gi|373947894|ref|ZP_09607855.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
OS183]
gi|378706771|ref|YP_005271665.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS678]
gi|386326258|ref|YP_006022375.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
BA175]
gi|386339421|ref|YP_006035787.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
OS117]
gi|418025221|ref|ZP_12664201.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
OS625]
gi|262826489|sp|B8E4L2.1|RSMH_SHEB2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826490|sp|A3CZL3.1|RSMH_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826491|sp|A6WIC3.1|RSMH_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826492|sp|A9KY21.1|RSMH_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|125995851|gb|ABN59926.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS155]
gi|151363562|gb|ABS06562.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS185]
gi|160859052|gb|ABX47586.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS195]
gi|217496760|gb|ACK44953.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS223]
gi|315265760|gb|ADT92613.1| S-adenosyl-methyltransferase MraW [Shewanella baltica OS678]
gi|333820403|gb|AEG13069.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
BA175]
gi|334861822|gb|AEH12293.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
OS117]
gi|353535634|gb|EHC05196.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
OS625]
gi|373884494|gb|EHQ13386.1| Ribosomal RNA small subunit methyltransferase H [Shewanella baltica
OS183]
Length = 313
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 175/259 (67%), Gaps = 8/259 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI++ +GIYID TFG+GGHS ++L++LG+ GRLIAID+D +++ +
Sbjct: 10 VLLAETVGGLNIKD---DGIYIDGTFGRGGHSRQVLQQLGENGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + + KIDG+L DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFMRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A ++ V + YGEE+ A+ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGQTAAQWLARAEIEDMAWVFKTYGEEKNARHIARCIAADRDKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARITKSKERNKHPATRVFQAIRIYINSELDQIDQALEGAVNVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTK---IPH 480
DRIVK FI +++ +PH
Sbjct: 247 DRIVKRFIRRHSQGESVPH 265
>gi|407715620|ref|YP_006836900.1| ribosomal RNA small subunit methyltransferase H [Cycloclasticus sp.
P1]
gi|407255956|gb|AFT66397.1| Ribosomal RNA small subunit methyltransferase H [Cycloclasticus sp.
P1]
Length = 311
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 180/280 (64%), Gaps = 7/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EAI L + +G+YID TFG+GGHS IL+ L +GRL+AIDKD ++V+
Sbjct: 10 VLLDEAIEGLI---RQTDGVYIDGTFGRGGHSGSILQVLSPQGRLLAIDKDMDAVNSPQA 66
Query: 287 ---ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+ D RF + H+ F +++ + ++ + +DGIL DLG+SS Q++ RGFSF+ DGP
Sbjct: 67 QALLKDERFELAHSSFAQMEQLAQERHWDGAVDGILLDLGVSSPQLDVAERGFSFMKDGP 126
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL 402
LDMRMD T+G SA++WL++ E + KV++ YGEE+FA+KIA EIV R T I T QL
Sbjct: 127 LDMRMDSTQGESAAQWLSHVEEGELVKVLRVYGEEKFARKIAAEIVLQRKETAIETTAQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I ++ + K+PATR+FQAIRI IN+EL +L AL L GR+ VISFHS
Sbjct: 187 AALIANVVKRREPGKHPATRSFQAIRIKINKELDDLEQALASSLSMLKQGGRLAVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
LEDRIVK FI ++ + R LP+ +P +K + +
Sbjct: 247 LEDRIVKRFIREQSRGEIVPRHLPMPLDAKKPVLKVVGKA 286
>gi|163751816|ref|ZP_02159032.1| S-adenosyl-methyltransferase [Shewanella benthica KT99]
gi|161328301|gb|EDP99462.1| S-adenosyl-methyltransferase [Shewanella benthica KT99]
Length = 313
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E + LNI+ +GIYID TFG+GGHS ++L+ LG GRLIAID+D +++ +
Sbjct: 10 VLLSETVAGLNIKQ---DGIYIDGTFGRGGHSREVLKHLGGNGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D SRFSI+H F +L ++ +K KIDG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDSRFSIVHGGFGQLATYVEDLGLKGKIDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++W+A A ++ V + YGEE+ ++ IA+ I R TP RTK+L +
Sbjct: 127 MRMDNSQGETAAEWIARAEIEDMAWVFKTYGEEKNSRHIARCIAADRQKTPFLRTKELAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARICKSKERNKHPATRVFQAIRIYINSELEQIDQALEGALVVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI N + + LPI
Sbjct: 247 DRMVKRFIRRNCQGKSVPHGLPI 269
>gi|89074178|ref|ZP_01160677.1| S-adenosyl-methyltransferase [Photobacterium sp. SKA34]
gi|89050114|gb|EAR55640.1| S-adenosyl-methyltransferase [Photobacterium sp. SKA34]
Length = 315
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 181/265 (68%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+++ L I + +GIYID TFG+GGHS IL LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESVDGLAI---KPDGIYIDGTFGRGGHSRLILSHLGENGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF IIH F+ ++ +++ + I ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFEIIHGPFSGMEKYMEERDLIGRVDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G SA++WLA A +I V++++GEERFAK+IA+ IV +R P+TRT++L
Sbjct: 127 RMDPTSGQSAAEWLAEAEADDIAWVLKEFGEERFAKRIARGIVEHRENPEKEPLTRTREL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I ++K+PATR+FQAIRIYIN EL + AL L +GR+ VISFHS
Sbjct: 187 ASLIAAVSPFKDKHKHPATRSFQAIRIYINSELDEIETALNGAVNILAPEGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDR+VK FI +K P + LP+
Sbjct: 247 LEDRMVKRFIRKQSKGPEVPAGLPL 271
>gi|90580220|ref|ZP_01236027.1| S-adenosyl-methyltransferase [Photobacterium angustum S14]
gi|90438522|gb|EAS63706.1| S-adenosyl-methyltransferase [Vibrio angustum S14]
Length = 315
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 181/265 (68%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+++ L I + +GIYID TFG+GGHS IL LG+ GRL +ID+D ++++ K
Sbjct: 10 VLLNESVDGLAI---KPDGIYIDGTFGRGGHSRLILSHLGENGRLYSIDRDPQAIAEAQK 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF IIH F+ ++ +++ + I ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFEIIHGPFSGMEKYMEERDLIGRVDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T G SA++WLA A +I V++++GEERFAK+IA+ IV +R P+TRT++L
Sbjct: 127 RMDPTSGQSAAEWLAEAEADDIAWVLKEFGEERFAKRIARGIVEHRENPEKEPLTRTREL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I ++K+PATR+FQAIRIYIN EL + AL L +GR+ VISFHS
Sbjct: 187 ASLIAAVSPFKDKHKHPATRSFQAIRIYINSELDEIETALNGAVNILAPEGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDR+VK FI +K P + LP+
Sbjct: 247 LEDRMVKRFIRKQSKGPEVPAGLPL 271
>gi|423093671|ref|ZP_17081467.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens Q2-87]
gi|397888212|gb|EJL04695.1| S-adenosyl-methyltransferase MraW [Pseudomonas fluorescens Q2-87]
Length = 315
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAGRGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ +V R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVVERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALEALEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFINFNTK--IPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ TK ++ R LP+ F PK+K + + + +K
Sbjct: 249 EDRIVKLFMRKLTKGEADNLPRNLPVRFEAFVPKIKIHGKAQFASEAELK 298
>gi|423015063|ref|ZP_17005784.1| NGG1p interacting factor 3 family protein [Achromobacter
xylosoxidans AXX-A]
gi|338781739|gb|EGP46119.1| NGG1p interacting factor 3 family protein [Achromobacter
xylosoxidans AXX-A]
Length = 255
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 152/224 (67%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGRS + I+TGVTAS L++ AV+ ADA+LVHHG+ W+ E+
Sbjct: 14 LQAARFKDYCPNGLQVEGRSEVGHIITGVTASEALLRIAVERGADAVLVHHGWMWRNEDR 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR-------FSK 620
++G ++ R+ + N +NLYAYHLPLD HP LGNNAQLA++L RR
Sbjct: 74 RVIGTRRTRMALALKNDLNLYAYHLPLDAHPTLGNNAQLARVLGLEPERRDDGAPRTCGP 133
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+N+ W+G +L T+ L I +++G++P+V+G+ ++ + I WCTG AQ
Sbjct: 134 DNLVWLGTAPDLA--------TLGQLAARIQQRLGRQPLVVGNPDQPLARIAWCTGGAQG 185
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+L DAI+ G TAYI+GE SEST ++++E+GVA+ AGHHATERY
Sbjct: 186 MLADAIDAGATAYITGEASESTFHLAQETGVAFLGAGHHATERY 229
>gi|121606314|ref|YP_983643.1| S-adenosyl-methyltransferase MraW [Polaromonas naphthalenivorans
CJ2]
gi|262824843|sp|A1VSU4.1|RSMH_POLNA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|120595283|gb|ABM38722.1| S-adenosyl-methyltransferase MraW [Polaromonas naphthalenivorans
CJ2]
Length = 306
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/285 (45%), Positives = 179/285 (62%), Gaps = 16/285 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI L + +G YIDATFG+GGHS +L +L GR+ A DKD ++++
Sbjct: 11 VLLNEAITALQVNP---DGHYIDATFGRGGHSRLLLSQLSALGRVTAFDKDLDAIAEAQS 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RFSI H F LD + + + G+L DLG+SS QI+N RGFSF +GPLDMR
Sbjct: 68 IDDPRFSIRHQGFMHLDQMPQA----SVAGVLMDLGVSSPQIDNPERGFSFRNEGPLDMR 123
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQLVEI 405
MD TRG S ++WL +A+ + +VI+DYGEERFA +A+ I R P+ T +L ++
Sbjct: 124 MDTTRGQSVAEWLQDASIEAMTEVIRDYGEERFAGLVARAIDRRRQEHGPLQTTAELADV 183
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ +++ + K+PATRTFQA+RI+IN EL+ L AL+ K L GR+VVISFHSLED
Sbjct: 184 VASAVKTREPGKDPATRTFQALRIFINAELEELQQALQASLKVLQPGGRLVVISFHSLED 243
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPK---MKFLARCKPKKK 507
RIVK FI +++ + DRR P PK +K L R K ++
Sbjct: 244 RIVKQFIAAHSREVY-DRRAPFAA----PKVMQLKALGRTKASEE 283
>gi|335043631|ref|ZP_08536658.1| putative S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Methylophaga
aminisulfidivorans MP]
gi|333790245|gb|EGL56127.1| putative S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Methylophaga
aminisulfidivorans MP]
Length = 312
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 178/294 (60%), Gaps = 13/294 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E I L++ + +G Y+DATFG+GGHS IL L GRL+ +D+D +++ G
Sbjct: 11 VLLSETIQGLSV---KADGKYLDATFGRGGHSRAILALLSDNGRLLGLDRDPQAIKTGLA 67
Query: 287 IT--DSRFSIIHNCFTELDIIL-KKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RFSI F+EL + + +DGIL D+G+SS Q+++ RGFSF+ DGPL
Sbjct: 68 LAAEDPRFSIEQANFSELSTAVHSRLWQGSVDGILMDIGVSSPQLDDAERGFSFMKDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ GISA++WLA A I VI+ GEER+ K+IA+ IV R PIT TKQL
Sbjct: 128 DMRMNPDAGISAAEWLATAEMDEIADVIKTLGEERYGKRIARAIVETRDENPITTTKQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ K+ ++K+PATRTFQAIRI+IN EL+ L+ AL+ L + GR+ VISFHSL
Sbjct: 188 DLVDKASPSRDKFKHPATRTFQAIRIFINNELEELTTALEQALDVLAVGGRLAVISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYC 517
EDRIVK F + + PI P++K + + IK ED
Sbjct: 248 EDRIVKRFFRDEARGDDLPSHFPITVDQLNPRLKVIGKA-------IKASEDET 294
>gi|422322606|ref|ZP_16403646.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Achromobacter xylosoxidans C54]
gi|317402444|gb|EFV83013.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Achromobacter xylosoxidans C54]
Length = 365
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 172/261 (65%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
G+++D TFG+GGHS ++L RLG RL+ DKD E++++ N + DSR +++H F
Sbjct: 44 RGVFVDGTFGRGGHSRELLGRLGPTARLVVFDKDPEAIAVANALAAADSRVTVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L++ I K+DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELRQLGIDKVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLRTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ L L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARTLASALDLLAPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + + +P ++ L R
Sbjct: 284 HARLPLRESEMPQPVLRSLGR 304
>gi|90413032|ref|ZP_01221030.1| putative S-adenosylmethionine-dependent methyltransferaseinvolvedin
cell envelope biogenesis [Photobacterium profundum 3TCK]
gi|90326047|gb|EAS42486.1| putative S-adenosylmethionine-dependent methyltransferaseinvolvedin
cell envelope biogenesis [Photobacterium profundum 3TCK]
Length = 315
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 180/265 (67%), Gaps = 7/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+++ L I + +GIYID TFG+GGHS IL LG+ GRL ID+D ++++
Sbjct: 10 VLLHESVDGLAI---KPDGIYIDGTFGRGGHSRLILSHLGENGRLYGIDRDPQAIAEAQS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ + +++ + I ++DG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 IDDPRFSIIHGPFSGMAQYMEERDLIGRVDGVLLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYR---SITPITRTKQL 402
RMD T GISA++WLA A +I V++++GEERFAK+IA+ IV +R P+TRT +L
Sbjct: 127 RMDPTSGISAAEWLAEAEADDIAWVLKEFGEERFAKRIARGIVEHRENPDKAPLTRTTEL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
+I ++K+PATR+FQAIRIYIN EL + AL K L +GR+ VISFHS
Sbjct: 187 AALISNVSPFRDKHKHPATRSFQAIRIYINSELDEIETALNGAVKVLAPQGRLSVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPI 487
LEDR+VK FI N+K P + P+
Sbjct: 247 LEDRMVKRFIRKNSKGPEVPAGFPL 271
>gi|71731949|gb|EAO34006.1| methyltransferase [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 340
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 191/309 (61%), Gaps = 24/309 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ + D R I H F
Sbjct: 47 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFA- 105
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 106 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 164 VSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKSGGCKSR 223
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ ++
Sbjct: 224 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHS 283
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 284 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVLR--V 329
Query: 537 TASLDLIKT 545
LD+++
Sbjct: 330 AEKLDVLEA 338
>gi|398859377|ref|ZP_10615054.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM79]
gi|398237072|gb|EJN22835.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM79]
Length = 315
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V + YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKQYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEP +K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPVIKIHGKAQTASEAELK 298
>gi|209696060|ref|YP_002263990.1| S-adenosyl-methyltransferase MraW [Aliivibrio salmonicida LFI1238]
gi|263446678|sp|B6ELI3.1|RSMH_ALISL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|208010013|emb|CAQ80336.1| S-adenosyl-methyltransferase MraW [Aliivibrio salmonicida LFI1238]
Length = 316
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 183/284 (64%), Gaps = 12/284 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I+ L I + +GIYID TFG+GGHS +IL RLG+ GRL +ID+D ++++
Sbjct: 10 VLLHESIDGLAI---KPDGIYIDGTFGRGGHSRQILSRLGENGRLYSIDRDPQAIAEAKT 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
ITD RF+IIH F+ L +++ + +IDG+L DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 ITDPRFNIIHGPFSGLKGYVEELGLVGQIDGVLLDLGVSSPQLDDADRGFSFMKDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRS---ITPITRTKQL 402
RMD T G+ S+WL A +I VI+++GE++ A +IAK IV YR P+TRT QL
Sbjct: 127 RMDPTSGMPVSQWLLTADVEDITWVIREFGEDKHAWRIAKGIVAYRDNEENEPLTRTGQL 186
Query: 403 VEIILKSIRGN-KRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
++I N K K+PATRTFQA RIYIN EL + AL GR+ VISFH
Sbjct: 187 AKLISDVAPKNFKEKKHPATRTFQAFRIYINSELDEIDTALNGALDVFAEGGRLSVISFH 246
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
SLEDR+VK+FI ++ P + +P L E ++K L K K
Sbjct: 247 SLEDRMVKHFIRKESRGPQVPHGIP----LTENQIKALGSAKMK 286
>gi|94676738|ref|YP_588954.1| S-adenosyl-methyltransferase MraW [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
gi|263445957|sp|Q1LSW0.1|RSMH_BAUCH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|94219888|gb|ABF14047.1| S-adenosyl-methyltransferase MraW [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
Length = 317
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 172/254 (67%), Gaps = 4/254 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ LNI+ + GIYID TFG+GGHS IL +LG KGRL+AID+D +++ G
Sbjct: 11 VLLNEAVTALNIKKD---GIYIDGTFGRGGHSRLILSKLGNKGRLLAIDRDPAAIAAGRN 67
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF+I+ F+ + + + N I IDGIL DLGISS Q+ + RGFSF +G LDM
Sbjct: 68 IHDLRFTIVQRPFSTIADYIAELNLIGCIDGILLDLGISSPQLADPDRGFSFRHNGKLDM 127
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T GISA +WL A+ + V+Q +GEERFAK+I++ I H IT T +L ++
Sbjct: 128 RMDTTCGISAREWLKQASVQEMTWVLQHFGEERFAKRISQAIFHQNRRRLITSTSELAKL 187
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + + ++K+PATR+FQAIRIYIN ELK + L L I G++VVISFHSLED
Sbjct: 188 ITTIVPWSNKHKHPATRSFQAIRIYINNELKEIEQVLNSALNILAIGGKLVVISFHSLED 247
Query: 466 RIVKNFINFNTKIP 479
R+VK FIN ++K+P
Sbjct: 248 RLVKYFINKHSKLP 261
>gi|399114884|emb|CCG17680.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Taylorella equigenitalis 14/56]
Length = 329
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 164/246 (66%), Gaps = 2/246 (0%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN--KITDSRFSIIHNCFTE 301
+G+Y+D TFG+GGHS +L L K +L+ DKD ++ K D R ++H F+
Sbjct: 40 SGLYVDGTFGRGGHSRYLLSLLDKNSKLVVFDKDPMAIEAAESLKKEDGRVLVVHGAFST 99
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ +L + I K+DGI DLGISS QI++ RGFSF+ DGPLDMRMD ++G++A++WLA+
Sbjct: 100 MSDVLSDFGITKVDGITMDLGISSPQIDDGTRGFSFMRDGPLDMRMDNSKGLTAAEWLAS 159
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A I KVI++YGEERFA +IAK I R PI T +L E+I ++R ++ ++PAT
Sbjct: 160 ADVELIAKVIKEYGEERFAFQIAKAIASRREHNPIRTTHELAELIAANVRTREKGQHPAT 219
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRIYIN+EL+ LS +L + L + GR+ VISFHSLEDRIVK FI +
Sbjct: 220 RTFQAIRIYINEELEELSRSLTSAIELLKVGGRLSVISFHSLEDRIVKQFIAKESNPASE 279
Query: 482 DRRLPI 487
RLPI
Sbjct: 280 FARLPI 285
>gi|345870880|ref|ZP_08822830.1| Ribosomal RNA small subunit methyltransferase H [Thiorhodococcus
drewsii AZ1]
gi|343921349|gb|EGV32070.1| Ribosomal RNA small subunit methyltransferase H [Thiorhodococcus
drewsii AZ1]
Length = 320
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 170/247 (68%), Gaps = 3/247 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+G+YID TFG+GGHS +LERLG GRLI ID+D E+V+ G + DSRFSI H F+
Sbjct: 33 DGVYIDCTFGRGGHSRAVLERLGHAGRLIGIDRDPEAVAEGELLAARDSRFSIHHGRFSS 92
Query: 302 LDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLA 360
+ I ++ + ++ GIL DLG+SS Q+++ RGFSF DGPLDMRMD RG+SA+ WLA
Sbjct: 93 IGEIARQAGVAGRLSGILLDLGVSSPQLDSPGRGFSFGADGPLDMRMDPERGLSAADWLA 152
Query: 361 NATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPA 420
A E I V+ + GEERF+++IA+ IV R+ TPI T QL +++ +S+R + K+PA
Sbjct: 153 KADESEIASVLYELGEERFSRRIARAIVAARAETPILTTSQLADLVARSVRTREPGKHPA 212
Query: 421 TRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPH 480
TRTFQA+RI +N+EL + + L L + G +VVISFHSLEDRIVK FI ++ P
Sbjct: 213 TRTFQALRIRVNEELDEVRLCLDQVCDLLAVAGHLVVISFHSLEDRIVKRFIRDESRGPQ 272
Query: 481 IDRRLPI 487
+ + LP+
Sbjct: 273 LPKGLPV 279
>gi|398841931|ref|ZP_10599136.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM102]
gi|398107040|gb|EJL97050.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM102]
Length = 315
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILRQLGPDGRLLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V + YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKQYGEERFSGRMARAVAERRDIKPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEP +K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPIIKIHGKAQSASEAELK 298
>gi|114564962|ref|YP_752476.1| S-adenosyl-methyltransferase MraW [Shewanella frigidimarina NCIMB
400]
gi|122298407|sp|Q07WH7.1|RSMH_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|114336255|gb|ABI73637.1| S-adenosyl-methyltransferase MraW [Shewanella frigidimarina NCIMB
400]
Length = 313
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 180/282 (63%), Gaps = 5/282 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE ++ LNI++ +GIYID TFG+GGHS +L LG+ GRLIAID+D +++ +
Sbjct: 10 VLLNETVDGLNIQS---DGIYIDGTFGRGGHSRHVLSHLGENGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L +++ + KI+G+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLAEYVEELGLTGKINGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++W+A A ++ V + YGEE+ ++ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGQTAAQWIARAEIEDMAWVFKTYGEEKNSRHIARCIAADREKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L +GR+ VISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELEQIDQALEGALAVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKK 506
DR+VK FI +++ + LPI K A K K
Sbjct: 247 DRMVKRFIRRHSQGESVPHGLPIMEAELNKSRKLKAVSKALK 288
>gi|73542779|ref|YP_297299.1| hypothetical protein Reut_A3095 [Ralstonia eutropha JMP134]
gi|72120192|gb|AAZ62455.1| Protein of unknown function DUF34 [Ralstonia eutropha JMP134]
Length = 248
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +Y+DYCPNGLQV+G + + +VTGVTASL L++ A++ A AILVHHGYFWK E++
Sbjct: 14 LEVSRYKDYCPNGLQVQGNAEVTHVVTGVTASLALVEAAIEAGAQAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL++L+ +NL+AYHLPLD HP+ GNNAQLA L F+ T RFS + +GW G
Sbjct: 74 RVVGQKHARLKRLLGADMNLFAYHLPLDNHPEFGNNAQLALQLGFAPTGRFSDDQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + ++ L H+ +G++P+ IGD + I +GWCTG AQ A+
Sbjct: 134 TL--------PAPMPLQALAAHVGGVLGREPLAIGDPCQMIRTVGWCTGGAQGYFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AY+SGE+SE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDAYLSGEVSEQTTHLARESGVAYLAAGHHATERY 222
>gi|402698512|ref|ZP_10846491.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas fragi A22]
Length = 315
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 186/290 (64%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL++LG +GRL+ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILQKLGPEGRLLGFDKDPQAIATGQA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+ F E+ + + K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 69 LAAEDGRFVIVQRSFAEMGSEIAARGLAGKVSGVLLDLGVSSPQLDDPERGFSFMNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ GISA++++ A++ I +V ++YGEERF+ ++A+ +V R+ITP RT L
Sbjct: 129 DMRMNPDEGISAAEFVNTASQDEIARVFKEYGEERFSGRMARAVVERRAITPFERTGDLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ K+PATRTFQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKHPATRTFQGLRIHVNNELGDLKAGLEAALESLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + F+P +K + + + +K
Sbjct: 249 EDRIVKLFMRDLVKGEPDNLPRGLPVQHTSFDPIIKIHGKAQFASEAELK 298
>gi|92114320|ref|YP_574248.1| methyltransferase [Chromohalobacter salexigens DSM 3043]
gi|123265653|sp|Q1QVF9.1|RSMH_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|91797410|gb|ABE59549.1| methyltransferase [Chromohalobacter salexigens DSM 3043]
Length = 331
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 178/279 (63%), Gaps = 5/279 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A+ L + +G Y+D TFG+GGHS IL+RL +GRL+AID+D +++ G
Sbjct: 31 VLLDGAVEALMTDP---DGCYLDGTFGRGGHSRAILQRLSPQGRLLAIDRDPAALAEGAT 87
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
D RF++ H F ELD I + + +++ G+L D+G+SS Q+++ RGFSFL DGPLDM
Sbjct: 88 WDDPRFTLRHGRFAELDDIARDAALHRRLSGVLLDVGVSSPQLDDASRGFSFLRDGPLDM 147
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD T+G SA+ WLA +E ++ V + YGEERFA++IAK IV R PIT T L E+
Sbjct: 148 RMDPTQGESAADWLARVSERDMSDVFKRYGEERFARRIAKAIVARRGERPITHTADLAEL 207
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++ K+PATR FQAIRI++N EL L AL + L GR+VVISFHSLED
Sbjct: 208 VKAAHPAWEKGKHPATRVFQAIRIHVNGELDQLEAALAAALESLAPGGRLVVISFHSLED 267
Query: 466 RIVKNFINFNTK-IPHIDRRLPIYNYLFEPKMKFLARCK 503
R+VK FI + H+ R LPI + ++ + + +
Sbjct: 268 RLVKRFIRDKVRGDTHLPRDLPIRDTQLNRRLAMVGKAR 306
>gi|380513706|ref|ZP_09857113.1| 16S rRNA m(4)C1402 methyltranserfase [Xanthomonas sacchari NCPPB
4393]
Length = 370
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 156/245 (63%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NGIY+D TFG+GGH+ +L +LG GRL+ +DKD E+++ D+R SI F E
Sbjct: 36 NGIYLDGTFGRGGHARGVLHKLGPGGRLLVMDKDPEAIAEAEHAFGADARVSIYRGSFAE 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 96 LG---QWDAATALDGVLFDLGVSSPQLDVAARGFSFGKDGPLDMRMDPDAGESAAQWLAR 152
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E I V+ YGEER +++IA+ IV R P+TRT +L ++I + +PAT
Sbjct: 153 AEEREIADVLWTYGEERQSRRIARAIVARREKQPLTRTAELADLIASVMPRGDSKTHPAT 212
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L +L GR+ VISFHSLEDRIVK F+ + K P
Sbjct: 213 RSFQAIRIHINRELADLETGLDAALARLKPGGRLAVISFHSLEDRIVKQFMQRHAKAPPS 272
Query: 482 DRRLP 486
+RRLP
Sbjct: 273 NRRLP 277
>gi|407363743|ref|ZP_11110275.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas mandelii JR-1]
Length = 315
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GR++ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRVLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V ++YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ L I GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDCLEIGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEP +K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPIIKIHGKAQSASEAELK 298
>gi|15837392|ref|NP_298080.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa 9a5c]
gi|20139246|sp|Q9PF88.1|RSMH_XYLFA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|9105686|gb|AAF83600.1|AE003919_11 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 313
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 190/309 (61%), Gaps = 24/309 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L+ LG GRL+ +DKD E++++ + D R I H F
Sbjct: 20 NGTYLDGTFGRGGHARGVLQLLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFA- 78
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF+ DGPLDMRMD G SA++WLA
Sbjct: 79 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFVKDGPLDMRMDPEMGESAAQWLAR 136
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 137 VSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKSGACKSR 196
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ +
Sbjct: 197 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHA 256
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 257 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVL--RV 302
Query: 537 TASLDLIKT 545
LD+++
Sbjct: 303 AEKLDVLEA 311
>gi|386817490|ref|ZP_10104708.1| Ribosomal RNA small subunit methyltransferase H [Thiothrix nivea
DSM 5205]
gi|386422066|gb|EIJ35901.1| Ribosomal RNA small subunit methyltransferase H [Thiothrix nivea
DSM 5205]
Length = 311
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 173/279 (62%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ LN++ G+Y+D T+G+GGHS ILE+LG GRL+ IDKD +VS
Sbjct: 11 VLLQEAVEALNVQQ---AGVYVDGTYGRGGHSALILEKLGVGGRLVVIDKDPVAVSHARG 67
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D R + H F + + L + + KI G+L DLG+SS Q+++ RGFSF+ +G L
Sbjct: 68 LYQHDPRVFVWHGSFRDFPLALAEAGVNGKIQGLLLDLGVSSPQLDDAARGFSFMREGQL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD++ G SA++WLA A E I V+ YGEERF+++IA+EIV R + T QL
Sbjct: 128 DMRMDMSSGESAAQWLARAGETEIADVLWRYGEERFSRQIAREIVRDRMQHRLETTLQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I +R + K+PATR+FQAIRI +NQEL ++ L L GR+ VISFHSL
Sbjct: 188 NLIAGVVRKREPGKHPATRSFQAIRIKVNQELDDVEECLHKSVGSLAPGGRLAVISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK+F+ + P + + LP+ +P MK L +
Sbjct: 248 EDRIVKHFLRDVSTPPRLPKGLPVMQETIQPPMKTLGKS 286
>gi|28199742|ref|NP_780056.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa Temecula1]
gi|28057863|gb|AAO29705.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
Length = 322
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 190/307 (61%), Gaps = 24/307 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ + D R I H F
Sbjct: 29 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFA- 87
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 88 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 146 VSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKFGACKSR 205
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ ++
Sbjct: 206 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHS 265
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 266 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVLR--V 311
Query: 537 TASLDLI 543
LD++
Sbjct: 312 AEKLDVL 318
>gi|399911525|ref|ZP_10779839.1| S-adenosyl-methyltransferase MraW [Halomonas sp. KM-1]
Length = 318
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 184/279 (65%), Gaps = 5/279 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+ A++ L + E G+Y+D TFG+GGHS ILERL +GRL+AID+D ++++ +
Sbjct: 18 VLLDGAVDALVHDPE---GVYLDGTFGRGGHSRAILERLSPEGRLLAIDRDPQAIAEAHT 74
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+TDSRF+I F L I +++++ K++G+L D+G+SS Q+++ RGFSFL DGPLDM
Sbjct: 75 LTDSRFAIEQGEFANLAEIARRHDLFGKLNGVLLDVGVSSPQLDDPERGFSFLRDGPLDM 134
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA+ WLA A+E +I +V + YGEERFAK++A+ +V R P RT L E+
Sbjct: 135 RMDPTRGESAADWLARASEADIAQVFKSYGEERFAKRLARAVVTRRLEKPFLRTGDLAEV 194
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ + ++ K+PATR FQA+RI+IN EL+ L AL + L G +VVISFHSLED
Sbjct: 195 LKTAHPAWEKGKHPATRAFQALRIHINAELEQLDAALAGALEALAPGGHLVVISFHSLED 254
Query: 466 RIVKNFINFNTK-IPHIDRRLPIYNYLFEPKMKFLARCK 503
R VK FI + + + R +P+ +++ L + +
Sbjct: 255 RRVKRFIREHVRGDSDLPRGVPVREDQLRRRLEMLGKAQ 293
>gi|398937637|ref|ZP_10667346.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM41(2012)]
gi|398166754|gb|EJM54845.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. GM41(2012)]
Length = 315
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 180/290 (62%), Gaps = 8/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + R +G Y+D TFG+GGHS IL +LG GR++ DKD ++++ G
Sbjct: 12 VLLDEAVEALAV---RPDGCYLDGTFGRGGHSRLILSQLGPDGRVLGFDKDPQAIATGQT 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF ++ F EL + + + K+ G+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 69 LAAEDGRFVVVQRSFAELGSEVAERGLAGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD +RGISA++++ A I +V + YGEERF+ ++A+ + R I P RT L
Sbjct: 129 DMRMDPSRGISAAEFVNTAPVEEIARVFKQYGEERFSGRMARAVAERRDIKPFERTADLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ + ++ KNPATR FQ +RI++N EL +L L+ + L + GR+VVISFHSL
Sbjct: 189 EVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALECLEVGGRLVVISFHSL 248
Query: 464 EDRIVKNFIN--FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
EDRIVK F+ + ++ R LP+ + FEP +K + + + +K
Sbjct: 249 EDRIVKLFMRKLVKGEADNLPRNLPVRHVAFEPIIKIHGKAQSASEAELK 298
>gi|56476120|ref|YP_157709.1| hypothetical protein ebA1284 [Aromatoleum aromaticum EbN1]
gi|56312163|emb|CAI06808.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 248
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L+I ++ DYCPNGLQVEGR+ + ++ GVTAS L+ AV ADA+LVHHGYFW+GE+
Sbjct: 14 LDIARFRDYCPNGLQVEGRAEVRRVLCGVTASQALVDLAVAEGADALLVHHGYFWRGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I GI+K+RL L+ N I+L AYHLPLD H + GNNAQL K+L + RF +GWIG
Sbjct: 74 RITGIRKRRLAGLLRNDISLLAYHLPLDAHAEFGNNAQLGKLLGWHGEGRFGDQELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + + ++G++P+++GD + + ++ WCTG AQ +AI
Sbjct: 134 TPLQPN--------SAGHIARSLAARLGREPLLVGDPERVVRQVAWCTGGAQGYFEEAIA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGEISE TV+++RESGVA+ AAGHHATERY
Sbjct: 186 AGADLYVSGEISEQTVHVARESGVAFIAAGHHATERY 222
>gi|71891921|ref|YP_277651.1| S-adenosyl-methyltransferase MraW [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|88909187|sp|Q493Q9.1|RSMH_BLOPB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|71796027|gb|AAZ40778.1| S-adenosyl-dependent methyl transferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 329
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/291 (48%), Positives = 190/291 (65%), Gaps = 6/291 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI LNI + G+YID TFG GGHS IL +L K+GRL+AIDKD +V +G
Sbjct: 22 VLLNEAIQSLNI---KATGMYIDGTFGSGGHSKLILSQLNKRGRLLAIDKDLLAVKIGKH 78
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
I D RF+IIH+ F+++ +K I +DGIL DLGIS+ QIN+ RGFSF+ DG L
Sbjct: 79 IAEQDDRFTIIHSSFSKMINHVKNIGLIGSVDGILLDLGISTFQINDCSRGFSFMQDGLL 138
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMDI+ GISA++WL+ A++ NI V++++GEERFAK IAK +V R TPI R+ L
Sbjct: 139 DMRMDISSGISAAEWLSKASQENITWVLKNFGEERFAKNIAKILVSKRRYTPIIRSIVLS 198
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++I +I K+PAT++F AIR++IN EL+ + LK L+ +GR+VVISF+SL
Sbjct: 199 KLICDAIPHRNMNKHPATKSFLAIRMFINNELEEIMQVLKDALIILSPRGRLVVISFNSL 258
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYE 514
EDR+VK FI ++ I +LP+ N K K + K KL K E
Sbjct: 259 EDRLVKYFIREHSCALSIPPKLPLTNNQIFSKYKNKCQLKNIGKLTPSKQE 309
>gi|157373543|ref|YP_001472143.1| S-adenosyl-methyltransferase MraW [Shewanella sediminis HAW-EB3]
gi|262826558|sp|A8FQ92.1|RSMH_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157315917|gb|ABV35015.1| S-adenosyl-methyltransferase MraW [Shewanella sediminis HAW-EB3]
Length = 314
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 175/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI+ +GIYID TFG+GGHS ++L+ LG+ GRLIAID+D ++++ +
Sbjct: 11 VLLTETVAGLNIKE---DGIYIDGTFGRGGHSREVLKHLGENGRLIAIDRDPQAIAAAEQ 67
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI+H F +L ++ +K KIDG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 68 FADDARFSIVHGGFGQLATYVEDLGLKGKIDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A+ W+A A ++ V + YGEE+ ++ IA+ I R TP RTK+L +
Sbjct: 128 MRMDNSQGETAADWIARAEIEDMAWVFKTYGEEKNSRHIARCIAADREKTPFLRTKELAD 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L GR+ VISFHSLE
Sbjct: 188 LIARISKNKERNKHPATRVFQAIRIYINSELEQIDQALEGALSVLAPHGRLSVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK FI + + + LPI
Sbjct: 248 DRMVKRFIRRHCQGESVPHGLPI 270
>gi|332527095|ref|ZP_08403175.1| 16S rRNA m(4)C1402 methyltranserfase [Rubrivivax benzoatilyticus
JA2]
gi|332111526|gb|EGJ11508.1| 16S rRNA m(4)C1402 methyltranserfase [Rubrivivax benzoatilyticus
JA2]
Length = 313
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 176/282 (62%), Gaps = 12/282 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + +G+Y+D TFG+GGH+ +L L + R++A D+D E+++
Sbjct: 14 VLLAEAVEALVTQ---ADGLYVDGTFGRGGHTRALLAALSPRARVLAFDRDPEAIAAAAA 70
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMR 346
I D RF+I H F + L + ++ G+L DLG+SS QI+ RGFSF D PLDMR
Sbjct: 71 IDDPRFTICHASFGAMREELAARGVGQVQGVLLDLGVSSPQIDTPERGFSFRFDAPLDMR 130
Query: 347 MDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTK-QLVEI 405
MD TRG +A+ +LA A E +I +VI+DYGEERFA +IAK +V R RT +L +
Sbjct: 131 MDTTRGETAADFLARADERHIAQVIRDYGEERFALQIAKAVVARRQGGDQLRTTGELSAL 190
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ ++++ + ++PATRTFQA+RI++N EL+ L L + L GR+VVISFHSLED
Sbjct: 191 VARAVKTREPGQDPATRTFQALRIFVNAELEALEQGLSAALQLLAPGGRLVVISFHSLED 250
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP---KMKFLARCKP 504
RIVKNFI ++ DRR P+ P K+K LAR KP
Sbjct: 251 RIVKNFITRESR-DEFDRRAPMAP----PRALKLKALARVKP 287
>gi|32129733|sp|Q87AF2.1|RSMH_XYLFT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263506475|sp|B2I9C0.2|RSMH_XYLF2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 313
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 190/307 (61%), Gaps = 24/307 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ + D R I H F
Sbjct: 20 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFA- 78
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 79 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 136
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 137 VSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKFGACKSR 196
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ ++
Sbjct: 197 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHS 256
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 257 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVLR--V 302
Query: 537 TASLDLI 543
LD++
Sbjct: 303 AEKLDVL 309
>gi|254787005|ref|YP_003074434.1| S-adenosyl-methyltransferase MraW [Teredinibacter turnerae T7901]
gi|262825811|sp|C5BP42.1|RSMH_TERTT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|237684519|gb|ACR11783.1| SAM-dependent methyltransferase MraW [Teredinibacter turnerae
T7901]
Length = 311
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 184/282 (65%), Gaps = 8/282 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ L + N +G+YID TFG+GGHS +L++L +GRL+A DKD E+V+ G +
Sbjct: 9 VLLKESVDAL-VTN--ADGVYIDGTFGRGGHSRAVLQKLSPQGRLLAFDKDPEAVAYGRE 65
Query: 287 I--TDSRFSIIHNCFTELDIILKKY---NIKKIDGILFDLGISSNQINNELRGFSFLLDG 341
+ +D+RFS++H+ F + N + G+L DLG+SS Q++ RGFSF+ DG
Sbjct: 66 LAGSDNRFSMVHDSFVNMASHWASAAHANNWSLSGVLLDLGVSSPQLDQAERGFSFMHDG 125
Query: 342 PLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQ 401
PLDMRMD + G +A++W+ A E + VI++YGEERFA+++A+ IV R +PIT+T +
Sbjct: 126 PLDMRMDNSSGQTAAEWINTAEESELAFVIKEYGEERFARRMARAIVAEREKSPITQTLR 185
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
L I+ ++ ++ K+PATR FQAIRI+IN+EL +L+ L + L GR+VVISFH
Sbjct: 186 LANIVSEANPKWEKGKHPATRAFQAIRIFINRELDDLTATLAQSLEMLPSGGRLVVISFH 245
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
SLEDRIVK F+ + +P+ + E K+K L + +
Sbjct: 246 SLEDRIVKRFMRDQARGKQFPIGMPVTEDMLEKKLKTLGKAQ 287
>gi|397662266|ref|YP_006502966.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Taylorella equigenitalis ATCC 35865]
gi|394350445|gb|AFN36359.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Taylorella equigenitalis ATCC 35865]
Length = 329
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 163/246 (66%), Gaps = 2/246 (0%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN--KITDSRFSIIHNCFTE 301
+G+Y+D TFG+GGHS +L L K +L+ DKD ++ K D R ++H F+
Sbjct: 40 SGLYVDGTFGRGGHSRYLLSLLDKNSKLVVFDKDPMAIEAAESLKKEDGRVLVVHGAFST 99
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ +L I K+DGI DLGISS QI++ RGFSF+ DGPLDMRMD ++G++A++WLA+
Sbjct: 100 MSDVLSDLGITKVDGITMDLGISSPQIDDGTRGFSFMRDGPLDMRMDNSKGLTAAEWLAS 159
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A I KVI++YGEERFA +IAK I R PI T +L E+I ++R ++ ++PAT
Sbjct: 160 ADVELIAKVIKEYGEERFAFQIAKAIASRREHNPIRTTHELAELIAANVRTREKGQHPAT 219
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRIYIN+EL+ LS +L + L + GR+ VISFHSLEDRIVK FI +
Sbjct: 220 RTFQAIRIYINEELEELSRSLTSAIELLKVGGRLSVISFHSLEDRIVKQFIAKESNPASE 279
Query: 482 DRRLPI 487
RLPI
Sbjct: 280 FARLPI 285
>gi|182682489|ref|YP_001830649.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa M23]
gi|386083822|ref|YP_006000104.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|182632599|gb|ACB93375.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa M23]
gi|307578769|gb|ADN62738.1| S-adenosyl-methyltransferase MraW [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 328
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 190/307 (61%), Gaps = 24/307 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ + D R I H F
Sbjct: 35 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFA- 93
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 94 --LLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 152 VSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKFGACKSR 211
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ ++
Sbjct: 212 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHS 271
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 272 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVLR--V 317
Query: 537 TASLDLI 543
LD++
Sbjct: 318 AEKLDVL 324
>gi|71281391|ref|YP_271121.1| S-adenosyl-methyltransferase MraW [Colwellia psychrerythraea 34H]
gi|88909194|sp|Q47VQ1.1|RSMH_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|71147131|gb|AAZ27604.1| S-adenosyl-methyltransferase MraW [Colwellia psychrerythraea 34H]
Length = 316
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 172/263 (65%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA++ L I + +G YID TFG+GGHS IL +L GRLIAID+D +++ K
Sbjct: 10 VLLNEAVDGLAITD---DGCYIDCTFGRGGHSSVILSKLSDNGRLIAIDRDPTAITAAEK 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I H F L I +K+ + K+DGIL DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 67 FKDDKRFLIEHQGFAALAEIAEKHELTGKVDGILLDLGVSSPQLDEAERGFSFMKDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++WLA A +I V++ +GEE+ A +IA IV R TP+TRT QL +
Sbjct: 127 MRMDTSKGQTAAEWLAVADVEDITWVLRTFGEEKHAWRIANAIVDTREETPLTRTSQLAK 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + K+PATR+FQAIR+YIN EL + AL L GR+VVISFHSLE
Sbjct: 187 LIKTTAPQREIKKHPATRSFQAIRMYINSELDQIEKALVASLDVLAEGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+VK F+ +++ + R LPI
Sbjct: 247 DRLVKQFMKKHSQGKKVPRGLPI 269
>gi|294142812|ref|YP_003558790.1| S-adenosyl-methyltransferase MraW [Shewanella violacea DSS12]
gi|20139165|sp|Q9F1N8.1|RSMH_SHEVD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|11761327|dbj|BAB19194.1| MraW [Shewanella violacea]
gi|293329281|dbj|BAJ04012.1| S-adenosyl-methyltransferase MraW [Shewanella violacea DSS12]
Length = 313
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 176/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E + LNI + +GIYID TFG+GGHS ++L+ LG GRLIAID+D +++ +
Sbjct: 10 VLLTETVAGLNI---KPDGIYIDGTFGRGGHSREVLKHLGDNGRLIAIDRDPQAIIAAEQ 66
Query: 287 ITD-SRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D +RFSI+H F +L ++ +K K+DG+L D G+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDARFSIVHGGFGQLADYVEDLGLKGKVDGVLLDFGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++W+A ++ V + YGEE+ ++ IA+ I R TP RTK+L +
Sbjct: 127 MRMDNSQGQTAAEWIARTEIEDMAWVFKTYGEEKNSRHIARCIAADRDKTPFLRTKELAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ K L +GR+ VISFHSLE
Sbjct: 187 LIARICKSKERNKHPATRVFQAIRIYINSELEQIDQALEGALKVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI +++ + LPI
Sbjct: 247 DRIVKRFIRRHSQGMSVPHGLPI 269
>gi|304310311|ref|YP_003809909.1| methyltransferase involved in cell envelope biogenesis [gamma
proteobacterium HdN1]
gi|301796044|emb|CBL44248.1| Methyltransferase involved in cell envelope biogenesis [gamma
proteobacterium HdN1]
Length = 310
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 174/260 (66%), Gaps = 3/260 (1%)
Query: 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTEL 302
GIY+D TFG+GGH+ +L RL RL+ DKD E++++G ++ D+RFSI+H F E+
Sbjct: 24 GIYVDGTFGRGGHARALLARLSADARLVGFDKDPEAIAVGLQLAAEDARFSIVHGSFAEI 83
Query: 303 DIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ ++ + G+L DLG+SS Q+++ RGFSF+ DGPLDMRM+ G SA+ WL +
Sbjct: 84 GTRPELAGLQGTVSGVLLDLGVSSPQLDDASRGFSFMNDGPLDMRMNNDAGESAADWLNH 143
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
I+ V+++ GEERFA +IA+ IV R ++P+ TKQL ++I K++ +++K+PAT
Sbjct: 144 EDAKQIEWVLRELGEERFAGRIARAIVAQREMSPLCTTKQLADLIYKAVPVREKHKHPAT 203
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQA+RI++N+EL++L + L + + + GRI VISFHSLEDRIVK F + K +
Sbjct: 204 RSFQAVRIWVNRELQDLEVGLAASLELVKVGGRIAVISFHSLEDRIVKQFFEKHVKGEQL 263
Query: 482 DRRLPIYNYLFEPKMKFLAR 501
R LP+ +++ +A+
Sbjct: 264 PRGLPVTGAALGIRLRHVAK 283
>gi|87122635|ref|ZP_01078512.1| hypothetical protein MED121_20371 [Marinomonas sp. MED121]
gi|86162093|gb|EAQ63381.1| hypothetical protein MED121_20371 [Marinomonas sp. MED121]
Length = 313
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 179/286 (62%), Gaps = 9/286 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE++ L + NG YID TFG+GGHS +L++L + G+L+ DKD ++ G
Sbjct: 11 VMLNESVEDLITDP---NGNYIDGTFGRGGHSRLVLQKL-ENGKLLGFDKDPVAIEYGKA 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKY--NIKKIDGILFDLGISSNQINNELRGFSFLLDGP 342
+ D+RF I+ + F +D + + K+DG+L DLG+SS Q+++ RGFSF+ DGP
Sbjct: 67 LEGEDARFQIVQDSFASMDQYIASHLDESGKLDGVLMDLGVSSPQLDDAERGFSFMNDGP 126
Query: 343 LDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQL 402
LDMRM+ G+SA++W+A A E I V+ YGEERF+++IAK I YR+ T I T QL
Sbjct: 127 LDMRMNPGVGLSAAQWIAQAKEKEIADVMYQYGEERFSRRIAKAICEYRAHTEILTTLQL 186
Query: 403 VEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHS 462
I+ + ++ KNPATR FQ IRI+IN EL +L L+ L + GR+VVISFHS
Sbjct: 187 ANIVKDANPAWEKGKNPATRAFQGIRIFINNELGDLETGLESAANALKVGGRLVVISFHS 246
Query: 463 LEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC-KPKKK 507
LEDRIVK F+ +K P + R LPI N K K + + KP K+
Sbjct: 247 LEDRIVKRFMKTMSKGPDLPRHLPIRNTELSIKFKTIGKAIKPSKQ 292
>gi|148828289|ref|YP_001293042.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittGG]
gi|263456035|sp|A5UIQ3.1|RSMH_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|148719531|gb|ABR00659.1| S-adenosyl-methyltransferase MraW [Haemophilus influenzae PittGG]
Length = 289
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 170/253 (67%), Gaps = 10/253 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L ++ NGIYID TFG+GGHS IL +L GRLIA+D+D +++ +K
Sbjct: 15 VLLHEAVNGLALKE---NGIYIDGTFGRGGHSRFILSQLSSNGRLIAVDRDPRAIAEAHK 71
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RF I HN F+ + I K N + KIDGIL DLG+SS Q++ RGFSF+ DGPLDM
Sbjct: 72 IQDLRFQIEHNSFSHIPEICDKLNLVGKIDGILLDLGVSSPQLDEAERGFSFMKDGPLDM 131
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITP------ITRT 399
RMD T+G+SA +WL + ++ V++ +GEERFAK+IA IV + ++RT
Sbjct: 132 RMDTTQGLSAEEWLKQVSIEDLTWVLKTFGEERFAKRIATAIVDFNKSAVKNGTEFLSRT 191
Query: 400 KQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVIS 459
QL E+I +++ ++K+PATR+FQAIRI+IN EL L L L +GR+ +IS
Sbjct: 192 SQLAELISQAVPFKDKHKHPATRSFQAIRIFINSELDELESLLNSALDMLAPEGRLSIIS 251
Query: 460 FHSLEDRIVKNFI 472
FHSLEDR+VK+F+
Sbjct: 252 FHSLEDRMVKHFM 264
>gi|110833451|ref|YP_692310.1| methyltransferase [Alcanivorax borkumensis SK2]
gi|123345754|sp|Q0VS10.1|RSMH_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|110646562|emb|CAL16038.1| methyltransferase [Alcanivorax borkumensis SK2]
Length = 312
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 179/274 (65%), Gaps = 7/274 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
G Y+D TFG+GGHS +L RLG+ GRLI ID+D ++++ G ++ +DSRF ++ F
Sbjct: 27 EGFYVDGTFGRGGHSRALLSRLGENGRLIGIDRDPQAIAAGQQLAASDSRFHMMAGRFDC 86
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L +++ + IDG+L DLG+SS Q+++ RGFSFL DGPLDMRMD T+G S ++WL+
Sbjct: 87 LPQAVEQAG-RPIDGLLLDLGVSSPQLDDAARGFSFLRDGPLDMRMDPTQGESVAEWLSY 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E +I V+ YGEER ++ IAK I R PITRT QL ++I + N++ K+PAT
Sbjct: 146 AAEKDIANVLYRYGEERKSRWIAKRICETRKEQPITRTLQLADLIESVLGRNEQGKHPAT 205
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFI-NFNTKIPH 480
R+FQA+RI+IN EL L L+ + L I GR+ +ISFHSLEDRIVK FI + + + P
Sbjct: 206 RSFQALRIHINGELDALDQVLEQSLETLAIGGRLAIISFHSLEDRIVKLFIRDHSGRAPK 265
Query: 481 IDRRLPIYNYL---FEPKMKFLARCKPKKKLNIK 511
LP+ + L EP K + K + K+N++
Sbjct: 266 GRGGLPLGDELPQRLEPVGKVMRASKAELKVNVR 299
>gi|440730095|ref|ZP_20910193.1| 16S rRNA m(4)C1402 methyltransferase [Xanthomonas translucens
DAR61454]
gi|440379667|gb|ELQ16256.1| 16S rRNA m(4)C1402 methyltransferase [Xanthomonas translucens
DAR61454]
Length = 375
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 160/245 (65%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
+GIY+D TFG+GGH+ +L +LG GRL+ +DKD E++++ D+R I F E
Sbjct: 36 DGIYLDGTFGRGGHARGVLHKLGPGGRLLLMDKDPEAIAVAELAFGDDARVRIRRGSFAE 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + ++DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 96 LG---QWDAVAELDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDAGESAAQWLAR 152
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E I V+ YG+ER +++IA+ IV R+ P+TRT QL E+I + +PAT
Sbjct: 153 ADERAIADVLWTYGDERQSRRIARAIVARRAEQPLTRTAQLAELIASVMPRGDSKTHPAT 212
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L +L GR+ VISFHSLEDRIVK F+N + K P
Sbjct: 213 RSFQAIRIHINRELADLEAGLDAALARLKPGGRLAVISFHSLEDRIVKQFMNRHAKAPPS 272
Query: 482 DRRLP 486
+RRLP
Sbjct: 273 NRRLP 277
>gi|118602334|ref|YP_903549.1| S-adenosyl-methyltransferase MraW [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|262826332|sp|A1AVX1.1|RSMH_RUTMC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|118567273|gb|ABL02078.1| S-adenosyl-methyltransferase MraW [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 307
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 182/269 (67%), Gaps = 6/269 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I LNI + +GIYIDATFG+GGH+ IL +LG++G+LIA D+D ++ +K
Sbjct: 9 VMLNESIGALNI---KTDGIYIDATFGRGGHAQGILNKLGEQGKLIAFDQDINAIEYAHK 65
Query: 287 -ITDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
TDSR ++I++ F+ L+II ++ + KIDGIL DLG+SS Q++N RGFSF DGPLD
Sbjct: 66 NFTDSRLTLIYSAFSNMLNIITQQGLMSKIDGILMDLGVSSPQLDNAQRGFSFKADGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T G+SA++WL A E I VI +G+E+ ++ IA I Y+ + T L
Sbjct: 126 MRMNQTTGMSATQWLNLANEEEIANVIYQFGDEKRSRHIATRIKKYQQKHTLETTLALAG 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ K ++ K K+PATRTFQAIRI+INQELK L L+ L GR+ +ISFHS+E
Sbjct: 186 IVSKVVKRQKN-KHPATRTFQAIRIFINQELKQLEDVLEQSKDILRKDGRLSIISFHSIE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
DRIVK+FI N++ ++ + LPI +Y E
Sbjct: 245 DRIVKHFIQKNSRQKNLPKGLPIIDYKIE 273
>gi|254479883|ref|ZP_05093131.1| S-adenosyl-methyltransferase MraW [marine gamma proteobacterium
HTCC2148]
gi|214039445|gb|EEB80104.1| S-adenosyl-methyltransferase MraW [marine gamma proteobacterium
HTCC2148]
Length = 308
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 176/288 (61%), Gaps = 5/288 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L +G Y+D TFG+GGHS +L++L G L+ +DKD + +
Sbjct: 8 VLLREAVEALVTAP---SGAYVDGTFGRGGHSRFLLDQLDDNGHLLGVDKDPVACECAAQ 64
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
++ DSRFS H F +L L+ +I DGIL DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 65 LSSADSRFSFYHGSFADLPQQLQLMDIDAFDGILLDLGVSSPQLDEAGRGFSFMSDGPLD 124
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G +A++WL+ A I +V+++YGEERFAK+IA IV R + P+T T QL +
Sbjct: 125 MRMDTSSGETAAQWLSYADTTAIAEVLKEYGEERFAKRIAAAIVKAREVEPLTTTAQLAK 184
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ ++ +R+K+PATR FQAIRI +N+EL++L L L + GR+VVISFHSLE
Sbjct: 185 VVSEANPRWERHKHPATRAFQAIRIKVNRELEDLGDLLASSLDMLKVGGRLVVISFHSLE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKK 512
DR+VK ++ + + +P+ + +MK + + + +
Sbjct: 245 DRMVKRYMRDMARGEQLPAGVPVTDAALNRRMKLVGKATKASDAEVDE 292
>gi|344342786|ref|ZP_08773656.1| Ribosomal RNA small subunit methyltransferase H [Marichromatium
purpuratum 984]
gi|343805338|gb|EGV23234.1| Ribosomal RNA small subunit methyltransferase H [Marichromatium
purpuratum 984]
Length = 315
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 176/279 (63%), Gaps = 5/279 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L E G Y+DATFG+GGHS +L RL GRLI +D+D E+++
Sbjct: 10 VLLDEAVSALVTEP---GGRYVDATFGRGGHSRAVLARLAPTGRLIGLDRDPEAIAAARA 66
Query: 287 ITDSRFSIIHNCFTELDIILKKY-NIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ D RF I+H+ F + L + + ++GIL DLG+SS Q++ RGFSF DGPLDM
Sbjct: 67 LDDPRFRILHSAFGGIGAALAEAGETEPLNGILLDLGVSSPQLDTAERGFSFSADGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD +RG SA+ WL +A + I +V++++GEERFAK+IA+ I R+ P+ T +L +
Sbjct: 127 RMDPSRGESAADWLMHAEQQEIARVLREFGEERFAKRIARAICERRAEAPLRTTAELAAL 186
Query: 406 ILKSIRGNKRY-KNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+ ++ G + K+PATRTFQA+RI +N EL + L + L GR+VVISFHSLE
Sbjct: 187 VDRAQPGRREPGKHPATRTFQALRIQVNDELGEIERCLDQVCELLAPGGRLVVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
DRIVK+F+ ++ + + +P+ +++ L + +
Sbjct: 247 DRIVKHFMRRESRGAVLPKGVPVTGAPAPGRLRLLGKAQ 285
>gi|348590593|ref|YP_004875055.1| rRNA small subunit methyltransferase H [Taylorella asinigenitalis
MCE3]
gi|347974497|gb|AEP37032.1| rRNA small subunit methyltransferase H [Taylorella asinigenitalis
MCE3]
Length = 327
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 164/248 (66%), Gaps = 2/248 (0%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCF 299
+ +G+++D TFG+GGHS +L LG+ +L D+D +++ ++ D R ++H F
Sbjct: 38 KTSGVFVDGTFGRGGHSRYLLSLLGRDSKLFVFDRDPQAIEAAKQLKEEDERVEVVHGAF 97
Query: 300 TELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWL 359
+ + L + I+K+DGI DLGISS QI++ RGFSF+ DGPLDMRMD ++G +A++W+
Sbjct: 98 SSMQKSLSDFGIQKVDGITMDLGISSPQIDDGTRGFSFMRDGPLDMRMDNSKGQTAAEWI 157
Query: 360 ANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNP 419
+A + KVI++YGEERFA KIAK I R PI T +L E++ ++R ++ ++P
Sbjct: 158 NSADVELLAKVIKEYGEERFALKIAKAIASRRESNPIRTTHELAELVSANVRTREKGQHP 217
Query: 420 ATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIP 479
ATRTFQAIRIYIN+EL+ LS +L L + GR+ VISFHSLEDRIVK FI +
Sbjct: 218 ATRTFQAIRIYINEELEELSRSLATAIDLLKVGGRLSVISFHSLEDRIVKQFIAKESNPA 277
Query: 480 HIDRRLPI 487
RLPI
Sbjct: 278 SEFARLPI 285
>gi|119899625|ref|YP_934838.1| hypothetical protein azo3336 [Azoarcus sp. BH72]
gi|119672038|emb|CAL95952.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 251
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 5/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + DYCPNGLQVEGR + ++ GVTASL L++ AV DA+LVHHGYFW+GE+
Sbjct: 14 LEAPRLRDYCPNGLQVEGRGEVRKVLCGVTASLSLVEAAVAGGYDALLVHHGYFWRGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I GI+K+RL L+ + I+L+AYHLPLD HP+LGNNAQL K++ + + RF+ +GW+G
Sbjct: 74 RISGIRKRRLAALLSHDISLFAYHLPLDAHPELGNNAQLGKLMGWRESGRFADQELGWLG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ + + + + ++G+ P+++GD + + + WCTG AQ AI
Sbjct: 134 ELPAANQGEPAEQVA-----RALAARLGRDPLLVGDGARPVRRLAWCTGGAQAYFEQAIL 188
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGEISE TV+++RESGV Y AAGHHATERY
Sbjct: 189 AGADLYVSGEISEQTVHLARESGVPYIAAGHHATERY 225
>gi|187925517|ref|YP_001897159.1| hypothetical protein Bphyt_3545 [Burkholderia phytofirmans PsJN]
gi|187716711|gb|ACD17935.1| protein of unknown function DUF34 [Burkholderia phytofirmans PsJN]
Length = 248
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 143/213 (67%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR IN + TGVTAS ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRKINKLATGVTASAAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ LI N +NL+AYHLPLD HP+ GNNAQ+ + + RF +N++GW+
Sbjct: 78 RKHARLKLLIANDLNLFAYHLPLDDHPEFGNNAQIGHKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ + + +G+ P+V GD ++++ +GWCTGAAQ + AI+ G
Sbjct: 134 ----TFPMPITLAHFTAQVEQTLGRTPLVFGDADRELRRVGWCTGAAQGMFDAAIDAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|209516577|ref|ZP_03265431.1| protein of unknown function DUF34 [Burkholderia sp. H160]
gi|209503018|gb|EEA03020.1| protein of unknown function DUF34 [Burkholderia sp. H160]
Length = 248
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR IN + TGVTAS+ ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRRINKLATGVTASVAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ L+ N +NL+AYHLPLD HP+ GNNAQ+ + + + RF N++GW+ +
Sbjct: 78 RKHARLKLLLANDLNLFAYHLPLDDHPEFGNNAQIGEKMGWISDARFGDNDLGWLATL-- 135
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
IT+ L I + +G+ P+V GD + ++ +GWCTGAAQ + AIN GV
Sbjct: 136 ------PMPITLSHLTAEIEQTLGRTPLVFGDPDMQLRRVGWCTGAAQGMFDAAINAGVD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ + ESGVA+ AAGHHATER+
Sbjct: 190 VYVTGEVSESVMHTAAESGVAFLAAGHHATERF 222
>gi|319778491|ref|YP_004129404.1| rRNA small subunit methyltransferase H [Taylorella equigenitalis
MCE9]
gi|317108515|gb|ADU91261.1| rRNA small subunit methyltransferase H [Taylorella equigenitalis
MCE9]
Length = 288
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/244 (48%), Positives = 162/244 (66%), Gaps = 2/244 (0%)
Query: 246 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN--KITDSRFSIIHNCFTELD 303
+Y+D TFG+GGHS +L L K +L+ DKD ++ K D R ++H F+ +
Sbjct: 1 MYVDGTFGRGGHSRYLLSLLDKNSKLVVFDKDPMAIEAAESLKKEDGRVLVVHGAFSTMS 60
Query: 304 IILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
+L + I K+DGI DLGISS QI++ RGFSF+ DGPLDMRMD ++G++A++WLA+A
Sbjct: 61 DVLSDFGITKVDGITMDLGISSPQIDDGTRGFSFMRDGPLDMRMDNSKGLTAAEWLASAD 120
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRT 423
I KVI++YGEERFA +IAK I R PI T +L E+I ++R ++ ++PATRT
Sbjct: 121 VELIAKVIKEYGEERFAFQIAKAIASRREHNPIRTTHELAELIAANVRTREKGQHPATRT 180
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDR 483
FQAIRIYIN+EL+ LS +L + L + GR+ VISFHSLEDRIVK FI +
Sbjct: 181 FQAIRIYINEELEELSRSLTSAIELLKVGGRLSVISFHSLEDRIVKQFIAKESNPASEFA 240
Query: 484 RLPI 487
RLPI
Sbjct: 241 RLPI 244
>gi|295677839|ref|YP_003606363.1| hypothetical protein BC1002_2804 [Burkholderia sp. CCGE1002]
gi|295437682|gb|ADG16852.1| protein of unknown function DUF34 [Burkholderia sp. CCGE1002]
Length = 248
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 144/213 (67%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR IN + TGVTAS+ ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRRINKLATGVTASVAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ L+ N +NL+AYHLPLD HP+ GNNAQ+ + + RF N++GW+ +
Sbjct: 78 RKHARLKLLLANDLNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGDNDLGWLATL-- 135
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
IT+ L I + +G+ P+V GD + ++ IGWCTGAAQ + AIN GV
Sbjct: 136 ------PMPITLSHLTAEIEQTLGRTPLVFGDPDMQLRRIGWCTGAAQGMFDAAINAGVD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ + ESGVA+ AAGHHATER+
Sbjct: 190 VYVTGEVSESVMHTAAESGVAFLAAGHHATERF 222
>gi|311103398|ref|YP_003976251.1| NGG1p interacting factor 3 family protein [Achromobacter
xylosoxidans A8]
gi|310758087|gb|ADP13536.1| NGG1p interacting factor 3 family protein [Achromobacter
xylosoxidans A8]
Length = 258
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 151/224 (67%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGRS I I+ GVTAS L++ AV+ ADA+LVHHG+ W+ E+
Sbjct: 17 LQAARFKDYCPNGLQVEGRSEIAHIIAGVTASEALLRVAVERGADAVLVHHGWMWRNEDR 76
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR-------FSK 620
++G ++ R+ + N +NLYAYHLPLD HP LGNNAQLA++L + R
Sbjct: 77 RVIGTRRARMALALKNDLNLYAYHLPLDAHPTLGNNAQLARVLGLTPALRDDGAPQTCGP 136
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+N+ W+G + + T+ L + ++G++P+V+GD + + + WCTG AQ
Sbjct: 137 DNLVWLGVA--------EGVATLGQLGARVAERLGRQPLVVGDPDLPLTRVAWCTGGAQG 188
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+L DA++ G +AYI+GE+SESTV+++RE+GV + AAGHHATERY
Sbjct: 189 MLGDAVDAGASAYITGEVSESTVHLARETGVGFIAAGHHATERY 232
>gi|406904239|gb|EKD46090.1| hypothetical protein ACD_69C00025G0005 [uncultured bacterium]
Length = 330
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 177/264 (67%), Gaps = 5/264 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L +E NGIY+DATFG+GGHS +IL+ + + LI IDKD +++ + +
Sbjct: 32 VLLKEAVAGLIVEK---NGIYVDATFGRGGHSQEILQHIDSESVLICIDKDQKAIQVAKQ 88
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
++D R + FT+L +++ N KI GIL DLG+SS Q+++ LRGFSFL DGPLDM
Sbjct: 89 LSDKRMIVRQGSFTKLKSWIEELNYTGKISGILLDLGVSSPQLDDTLRGFSFLRDGPLDM 148
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD ++ ++A+ WL NA E I +V+++YGEERF+++IA IV R + PI T +L EI
Sbjct: 149 RMDQSQPLNAAMWLKNAKEDEIARVLKEYGEERFSRRIAHAIVKERVVAPIVTTGRLAEI 208
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ K+ + +K+PATR FQAIRI+IN EL+ LS L+ L + GR+ VISFHSLED
Sbjct: 209 VSKAHPRWEAHKHPATRVFQAIRIFINNELEELSNCLEQCLDVLAVGGRLAVISFHSLED 268
Query: 466 RIVKNFINFNTKIPHIDRRLPIYN 489
RI+K FI K I LP+Y+
Sbjct: 269 RIIKEFIK-KHKGGGIPEWLPLYD 291
>gi|433676886|ref|ZP_20508940.1| S-adenosyl-methyltransferase MraW [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430817994|emb|CCP39276.1| S-adenosyl-methyltransferase MraW [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 375
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 159/245 (64%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
+GIY+D TFG+GGH+ +L +LG GRL+ +DKD E++++ D+R I F E
Sbjct: 36 DGIYLDGTFGRGGHARGVLHKLGPGGRLLLMDKDPEAIAVAELAFGDDARVRIRRGSFAE 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + ++DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 96 LG---QWDAAAELDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDAGESAAQWLAR 152
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E I V+ YG+ER +++IA+ IV R+ P+TRT QL E+I + +PAT
Sbjct: 153 ADERAIADVLWTYGDERQSRRIARAIVARRAEQPLTRTAQLAELIASVMPRGDSKTHPAT 212
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L +L GR+ VISFHSLEDRIVK F+N + K P
Sbjct: 213 RSFQAIRIHINRELADLEAGLDAALARLKPGGRLAVISFHSLEDRIVKQFMNRHAKAPPS 272
Query: 482 DRRLP 486
+RRLP
Sbjct: 273 NRRLP 277
>gi|384417848|ref|YP_005627208.1| S-adenosyl-methyltransferase MraW [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353460762|gb|AEQ95041.1| S-adenosyl-methyltransferase MraW [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 347
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/259 (45%), Positives = 161/259 (62%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ + D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEQTFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAQWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ATDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIYINRELDDLETGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 272 NRRLPEAQP-FVPTLQLVS 289
>gi|217969346|ref|YP_002354580.1| hypothetical protein Tmz1t_0917 [Thauera sp. MZ1T]
gi|217506673|gb|ACK53684.1| protein of unknown function DUF34 [Thauera sp. MZ1T]
Length = 249
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 146/217 (67%), Gaps = 7/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L+ + +DYCPNGLQVEGR+ + ++ GVTAS L+ A DA+ VHHG FWKG++
Sbjct: 14 LDASRLKDYCPNGLQVEGRAEVRRVLCGVTASQALLDLAATGAYDAVFVHHGLFWKGDDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ G +++RL L+ N I+L+AYHLPLD+HP+LGNNAQLA+++ + T RF+ +GWIG
Sbjct: 74 RVTGFRRRRLHTLLANDISLFAYHLPLDVHPELGNNAQLARLMGWQGTARFADQELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ ++ ++ + R++G++P+++GD + + I WCTG AQ AI
Sbjct: 134 RPA-------REGERADEIARALARRLGREPLLVGDGERTVRRIAWCTGGAQGFFEPAIL 186
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGEISE TV+++RESGV Y AAGHHATERY
Sbjct: 187 AGAELYVSGEISEPTVHLARESGVPYIAAGHHATERY 223
>gi|293603437|ref|ZP_06685862.1| S-adenosyl-methyltransferase MraW [Achromobacter piechaudii ATCC
43553]
gi|292818139|gb|EFF77195.1| S-adenosyl-methyltransferase MraW [Achromobacter piechaudii ATCC
43553]
Length = 365
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 177/263 (67%), Gaps = 3/263 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
G+++D TFG+GGHS ++L RLGK RL+ DKD E++++ N + TDSR +++H F
Sbjct: 44 RGVFVDGTFGRGGHSRELLGRLGKSARLVVFDKDPEAIAVANALAATDSRVTVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L++ I K+DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + ++WLA
Sbjct: 104 MAEELQQLGIDKVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVAEWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLCTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ L + L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARTLAAALELLAPGGRLAVISFHSLEDRMVKQCIVAAARPAAA 283
Query: 482 DRRLPI-YNYLFEPKMKFLARCK 503
RLP+ + + +P ++ L R +
Sbjct: 284 HARLPLRESEMPQPILRSLGRVQ 306
>gi|388569369|ref|ZP_10155767.1| S-adenosyl-methyltransferase MraW [Hydrogenophaga sp. PBC]
gi|388263424|gb|EIK89016.1| S-adenosyl-methyltransferase MraW [Hydrogenophaga sp. PBC]
Length = 306
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 185/315 (58%), Gaps = 30/315 (9%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L+I +G Y+DATFG+GGHS IL+RL +GRL DKD +++ + +
Sbjct: 10 VLLTEAVQALSINP---DGHYVDATFGRGGHSRAILQRLSPQGRLTVFDKDPQAIEVARQ 66
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+R ++ H+ F + DG+L DLG+SS QI++ RGFSF DGPLD
Sbjct: 67 LAAQDARVTVHHSGFA----AIADLPPASADGLLMDLGVSSPQIDDPARGFSFRHDGPLD 122
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLV 403
MRMD TRG S ++WL + +VI+DYGEERFA +IAK I R P+ T +L
Sbjct: 123 MRMDTTRGQSVAQWLETVPIPTLTEVIRDYGEERFAAQIAKAIDRRRQERGPVRTTGELA 182
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ +++ + K+PATRTFQA+RI+IN EL+ L AL+ L +GR+VVISFHSL
Sbjct: 183 EIVAGAVKTREPGKDPATRTFQALRIFINAELEELQQALEASLHLLKPQGRLVVISFHSL 242
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQV 523
EDR VK F+ +++ +DRR P A P + ++++ P+ +V
Sbjct: 243 EDRPVKQFMARHSRT-VVDRRAP------------FAEPAPTRLADVRR---VMPSDAEV 286
Query: 524 EG----RSNINVIVT 534
+G RS + + T
Sbjct: 287 QGNPRARSAVMRVAT 301
>gi|323144058|ref|ZP_08078702.1| S-adenosyl-methyltransferase MraW [Succinatimonas hippei YIT 12066]
gi|322416171|gb|EFY06861.1| S-adenosyl-methyltransferase MraW [Succinatimonas hippei YIT 12066]
Length = 316
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 173/273 (63%), Gaps = 5/273 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE + LNI +GIY+DATFG+GGHS +IL+RL K GRL A+D+D ++
Sbjct: 8 VLLNETLAGLNINP---DGIYVDATFGRGGHSREILKRLNKNGRLYALDRDLSAIEAAKS 64
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSI+H F++L + + + I K++GIL D+G+SS Q+++ RGFSF DGPLDM
Sbjct: 65 IADERFSIVHARFSQLKEVCEDFGILGKVNGILMDIGVSSPQLDDASRGFSFDKDGPLDM 124
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + I A+ + ++ + + YGEERFA K+A IV R TP T T L ++
Sbjct: 125 RMDQSAKIDAALIVNTYDAKDLAYIFKTYGEERFAGKVANAIVRQREKTPFTTTLALADL 184
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I SI G K+ ATR FQA+RI +N EL+ L AL L+ GR+ VISFHSLED
Sbjct: 185 ISASIPGKPGPKHKATRCFQALRIAVNSELEELKSALDGSIDVLDKDGRLCVISFHSLED 244
Query: 466 RIVKNFINFNTKIPHIDRRLPIYN-YLFEPKMK 497
RIVK FI N++ P + R LPI + L E K+K
Sbjct: 245 RIVKTFIRENSEGPKLPRGLPITDEELAELKLK 277
>gi|254426992|ref|ZP_05040699.1| S-adenosyl-methyltransferase MraW [Alcanivorax sp. DG881]
gi|196193161|gb|EDX88120.1| S-adenosyl-methyltransferase MraW [Alcanivorax sp. DG881]
Length = 312
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/274 (45%), Positives = 179/274 (65%), Gaps = 7/274 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
G Y+D TFG+GGHS +L RL GRL ID+D ++++ G ++ +DSRF ++ N F
Sbjct: 27 EGFYVDGTFGRGGHSRALLARLDDNGRLAGIDRDPQAIAAGQELAASDSRFHMVANRFDC 86
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++++ + IDG+L DLG+SS Q+++ RGFSFL DGPLDMRMD T+G S ++WL++
Sbjct: 87 LPQVVEQAG-RPIDGLLLDLGVSSPQLDDAARGFSFLRDGPLDMRMDPTQGESVAEWLSH 145
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E +I V+ YGEER ++ IAK I R PITRT QL +I + N++ K+PAT
Sbjct: 146 AAEKDIANVLYRYGEERKSRWIAKRICDTRKEQPITRTLQLANLIESVLGRNEQGKHPAT 205
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFI-NFNTKIPH 480
R+FQA+RI+IN EL L+ L+ + L I GR+ +ISFHSLEDRIVK FI + + + P
Sbjct: 206 RSFQALRIHINGELDALNQVLEQSLETLAIGGRLAIISFHSLEDRIVKLFIRDHSGRAPK 265
Query: 481 IDRRLPIYNYL---FEPKMKFLARCKPKKKLNIK 511
LP+ N + EP K + K + K+N++
Sbjct: 266 GRGGLPLGNEMPQRLEPVGKAMRASKAELKVNVR 299
>gi|58583456|ref|YP_202472.1| S-adenosyl-methyltransferase MraW [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|58428050|gb|AAW77087.1| cell division protein [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 353
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/259 (45%), Positives = 160/259 (61%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ + D+R SI F
Sbjct: 41 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEQTFGGDARVSIHRGSFAG 100
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q+ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 101 LGQVVAAATV---DGILLDLGVSSPQLEVAGRGFSFGKDGPLDMRMDPDSGQSAAQWLAQ 157
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 158 ATDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 217
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 218 RSFQAIRIYINRELDDLETGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 277
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 278 NRRLPEAQP-FVPTLQLVS 295
>gi|440509715|ref|YP_007347151.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Blochmannia chromaiodes str. 640]
gi|440453928|gb|AGC03420.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Blochmannia chromaiodes str. 640]
Length = 318
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 189/291 (64%), Gaps = 6/291 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEAI LNI + G+YID TFG GGHS IL +L K+GRL+AIDKD +V +G
Sbjct: 11 VLLNEAIQSLNI---KATGMYIDGTFGSGGHSKLILSQLNKRGRLLAIDKDLLAVKIGKH 67
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
I D RF+IIH+ F+++ +K I +DGIL DLGIS+ QIN+ RGFSF+ DG L
Sbjct: 68 IAEKDDRFTIIHSSFSKMINHVKSIGLIGSVDGILLDLGISTFQINDCSRGFSFMQDGLL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMDI+ GISA++WL+ A++ NI V++++GEERFAK IAK +V R PI R+ L
Sbjct: 128 DMRMDISSGISAAEWLSKASQENITWVLKNFGEERFAKNIAKILVSKRRYAPIIRSIILS 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
++I +I K+PAT++F AIR++IN EL+ + LK L+ +GR+VVISF+SL
Sbjct: 188 KLICDAIPHRNMNKHPATKSFLAIRMFINNELEEIMQVLKDALIILSPRGRLVVISFNSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYE 514
EDR+VK FI ++ I +LP+ N K K + K KL K E
Sbjct: 248 EDRLVKYFIREHSCALSIPPKLPLTNNQIFSKYKNKCQLKNIGKLTPSKQE 298
>gi|424789868|ref|ZP_18216482.1| S-adenosyl-methyltransferase [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422798331|gb|EKU26442.1| S-adenosyl-methyltransferase [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 380
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 158/245 (64%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
+GIY+D TFG+GGH+ +L +LG GRL+ +DKD E+++ D+R I F E
Sbjct: 36 DGIYLDGTFGRGGHARGVLHKLGPGGRLLLMDKDPEAIAAAELAFGDDTRVRIRRGSFAE 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + ++DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 96 LG---QWDAAAELDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDAGESAAQWLAR 152
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E I V+ YG+ER +++IA+ IV R+ P+TRT QL ++I + +PAT
Sbjct: 153 ADERAIADVLWTYGDERQSRRIARAIVARRAEQPLTRTAQLADLIASVMPRRDSKTHPAT 212
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L +L GR+ VISFHSLEDRIVK F+N + K P
Sbjct: 213 RSFQAIRIHINRELADLEAGLDAALARLKPGGRLAVISFHSLEDRIVKQFMNRHAKAPPS 272
Query: 482 DRRLP 486
+RRLP
Sbjct: 273 NRRLP 277
>gi|394989486|ref|ZP_10382319.1| hypothetical protein SCD_01910 [Sulfuricella denitrificans skB26]
gi|393790986|dbj|GAB71958.1| hypothetical protein SCD_01910 [Sulfuricella denitrificans skB26]
Length = 248
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
++ ++ DYCPNG+QVEGR + +V+GVTASLDL+K A+ + ADAILVHHGYFWK E++
Sbjct: 14 MDADQFHDYCPNGVQVEGRPEVFRLVSGVTASLDLLKAAIGVGADAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+K+ R+E L+ + ++L AYHLPLD HP LGNNAQLA+ L F RF + +I G
Sbjct: 74 RIAGVKRARIEFLLRHNVSLLAYHLPLDAHPVLGNNAQLAQKLGFEVEGRFGEQSIACHG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + + L +TR +G+ P++IG+ + + I WC+GAAQ +AI
Sbjct: 134 ALTDE--------LPLCGLEERVTRVLGRAPLIIGEGDTPVRRIAWCSGAAQGYFEEAIR 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV A+++GEISE V+++RE+GVA+ AAGHHATERY
Sbjct: 186 LGVDAFLTGEISEQCVHLAREAGVAFIAAGHHATERY 222
>gi|68565414|sp|Q5GW34.2|RSMH_XANOR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 337
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/259 (45%), Positives = 160/259 (61%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ + D+R SI F
Sbjct: 25 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEQTFGGDARVSIHRGSFAG 84
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q+ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 85 LGQVVAAATV---DGILLDLGVSSPQLEVAGRGFSFGKDGPLDMRMDPDSGQSAAQWLAQ 141
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 142 ATDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 201
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 202 RSFQAIRIYINRELDDLETGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 261
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 262 NRRLPEAQP-FVPTLQLVS 279
>gi|285019581|ref|YP_003377292.1| S-adenosyl-methyltransferase [Xanthomonas albilineans GPE PC73]
gi|283474799|emb|CBA17298.1| putative s-adenosyl-methyltransferase protein [Xanthomonas
albilineans GPE PC73]
Length = 333
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 160/257 (62%), Gaps = 6/257 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NGIY+D TFG+GGH+ +L +LG GRL+ +DKD E+++ D+R SI F +
Sbjct: 36 NGIYLDGTFGRGGHARGVLHKLGPGGRLLVMDKDPEAIAEAEHAFGGDARVSIRRGSFAD 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 96 LG---HWDAATALDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPHAGESAAQWLAR 152
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A E I V+ YGEER +++IA+ IV R+ P+TRT QL E+I + +PAT
Sbjct: 153 ADEREIADVLWHYGEERQSRRIARAIVARRAEQPLTRTAQLAELIATVMPRGDSKTHPAT 212
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+ N+EL +L L +L GR+ VISFHSLEDRIVK+F+ + K P
Sbjct: 213 RSFQAIRIHTNRELADLESGLDAALARLKPGGRLAVISFHSLEDRIVKHFMQRHAKAPPS 272
Query: 482 DRRLPIYNYLFEPKMKF 498
+RRLP F P ++
Sbjct: 273 NRRLP-EAQTFVPALRL 288
>gi|331005086|ref|ZP_08328490.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium IMCC1989]
gi|330421141|gb|EGG95403.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium IMCC1989]
Length = 314
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 188/279 (67%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+++ L + +NG Y+D TFG+GGHS ++L RL + +L+A+DKD ++++ +K
Sbjct: 13 VLLHESVDALITD---VNGFYVDGTFGRGGHSREVLLRLSEDAQLMAVDKDEQAIAEADK 69
Query: 287 --ITDSRFSIIHNCFTELDI-ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ RFSI H F++L+ +++ + K++GIL DLG+SS Q++ RGFSF+ DGPL
Sbjct: 70 QFSDEKRFSIRHGSFSQLNQWLVEIEKLGKVNGILLDLGVSSPQLDEAHRGFSFMQDGPL 129
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ T+G +A++W+ +A++ +I +V+++YGEERF+K+IA+ IV +R P T +L
Sbjct: 130 DMRMNRTKGETAAEWINSASQEDIARVLKEYGEERFSKRIARAIVDHRQEQPFATTHELS 189
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ ++ ++ K+PATR FQAIRI+IN EL +L + L+ L + GR+VVISFHSL
Sbjct: 190 KVVTEANPAWEKGKHPATRAFQAIRIHINDELSDLDVILEQALAALAVGGRLVVISFHSL 249
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDR VK FI + + +P+ + +++ L +
Sbjct: 250 EDRRVKRFIRQQVQGDRLPMGVPVRDEQLNKRLRSLGKV 288
>gi|423015701|ref|ZP_17006422.1| 16S rRNA m(4)C1402 methyltranserfase [Achromobacter xylosoxidans
AXX-A]
gi|338781204|gb|EGP45597.1| 16S rRNA m(4)C1402 methyltranserfase [Achromobacter xylosoxidans
AXX-A]
Length = 365
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 172/261 (65%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS--RFSIIHNCFTE 301
G+++D TFG+GGHS ++L RLG RL+ DKD E++++ N + + R +++H F
Sbjct: 44 RGVFVDGTFGRGGHSRELLGRLGPAARLVVFDKDPEAIAVANALAAADARVTVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L++ I+K+DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELQQLGIEKVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLRTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ L L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARTLASALDLLAPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + + +P ++ L R
Sbjct: 284 HARLPLRESEMPQPVLRSLGR 304
>gi|91791714|ref|YP_561365.1| S-adenosyl-methyltransferase MraW [Shewanella denitrificans OS217]
gi|123061331|sp|Q12SD4.1|RSMH_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|91713716|gb|ABE53642.1| methyltransferase [Shewanella denitrificans OS217]
Length = 313
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 182/290 (62%), Gaps = 7/290 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E ++ LNI+ +GIYID TFG+GGHS +L LG GRLIAID+D +++ +
Sbjct: 10 VLLKETVDGLNIQP---DGIYIDGTFGRGGHSRHVLSHLGPNGRLIAIDRDPQAIEAAKQ 66
Query: 287 ITDS-RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I+H F +L D + + + KIDG+L DLG+SS Q+++ RGFSFL DGPLD
Sbjct: 67 FADDPRFQIVHGGFGQLADYVAELGLVGKIDGVLLDLGVSSPQLDDAERGFSFLRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD ++G +A++W+A A ++ V + YGEE+ ++ IA+ I R TP RTK L +
Sbjct: 127 MRMDNSQGQTAAQWIARAEIEDMAWVFKTYGEEKNSRHIARCIAADREKTPFLRTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + + +R K+PATR FQAIRIYIN EL+ + AL+ L GR+ +ISFHSLE
Sbjct: 187 LIARITKNKERNKHPATRVFQAIRIYINSELEQIDQALEGAVNVLAPHGRMSIISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLF--EPKMKFLARCKPKKKLNIKK 512
DR+VK F+ +++ + LPI K+K L + ++ +++
Sbjct: 247 DRMVKRFMRRHSQGESVPHGLPITEAEINKSKKLKTLGKAMKPSEIEVEQ 296
>gi|417559103|ref|ZP_12210057.1| S-adenosylmethionine-dependent methyltransferase [Xylella
fastidiosa EB92.1]
gi|338178371|gb|EGO81362.1| S-adenosylmethionine-dependent methyltransferase [Xylella
fastidiosa EB92.1]
Length = 345
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 190/307 (61%), Gaps = 24/307 (7%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L++LG GRL+ +DKD E++++ + D R I H F
Sbjct: 52 NGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFA- 110
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
++ + + +DG+LF+LG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 111 --LLAQLAAPQSLDGVLFNLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLAR 168
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEII----LKSIRGNKRYK 417
+E I V+ YGEE+ +++IA+ IV YR+ P+ RT QL E+I L++ G + +
Sbjct: 169 VSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKFGACKSR 228
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQ IRI++N+EL +L + L+ L GR+VVISFHSLEDRIVK FI+ ++
Sbjct: 229 IHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHS 288
Query: 477 KIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGV 536
K+P +RRLP F P ++ + R IK ED L+V R+ V+ V
Sbjct: 289 KVPPTNRRLPEVQT-FVPLLRMIGRA-------IKADEDE----LEVNPRARSAVLR--V 334
Query: 537 TASLDLI 543
LD++
Sbjct: 335 AEKLDVL 341
>gi|410624695|ref|ZP_11335490.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410155776|dbj|GAC30864.1| ribosomal RNA small subunit methyltransferase H [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 312
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 174/263 (66%), Gaps = 5/263 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ LNI + +GIYIDATFG+GGHS +IL++L KGRLIA+D+D ++ +
Sbjct: 11 VLLQESLSGLNI---KPDGIYIDATFGRGGHSAEILKQLSSKGRLIALDRDDTAIESAQR 67
Query: 287 -ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
I D RFSI H F+ ++ ++ + + IDG+L D+G+SS Q+++ RGFSF DGPLD
Sbjct: 68 FIDDPRFSIHHVAFSNIEDVVNELELMCNIDGVLMDIGVSSPQLDDASRGFSFQKDGPLD 127
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + GISA+ WL A I V++ +GEE+F K+IA ++ R I P+ T + +
Sbjct: 128 MRMDRSSGISAADWLNKADLEEITMVLKTFGEEKFGKRIAHAVLEQRVIKPLETTAEFAQ 187
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I K++ ++K+PATR+FQ +RI+IN EL+ L+ L+ L GR+ VISFHSLE
Sbjct: 188 LIDKAVPVKDKFKHPATRSFQGVRIFINGELEQLNQGLEGAVNVLKSGGRLAVISFHSLE 247
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DR+ K FI +K I R LPI
Sbjct: 248 DRVAKRFIRKLSKGKEIPRGLPI 270
>gi|21672500|ref|NP_660567.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|8134808|sp|O85295.1|RSMH_BUCAP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|3435166|gb|AAC32335.1| hypothetical protein [Buchnera aphidicola]
gi|21623120|gb|AAM67778.1| hypothetical 36.0 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 312
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 177/264 (67%), Gaps = 7/264 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
NGIYID TFG GGH+ IL+ +G++GRL AID+D SV +GN+I D RF IIH+ F+++
Sbjct: 24 NGIYIDGTFGMGGHALSILKTIGREGRLYAIDRDPNSVFIGNQIKDKRFHIIHSNFSKI- 82
Query: 304 IILKKYN--IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ KYN I K++GILFDLG SS QI NE RGFSF +GPLDMRM+ GISAS+WL
Sbjct: 83 LNYAKYNNIIGKVNGILFDLGTSSLQIENEKRGFSFKKNGPLDMRMNPHAGISASEWLFK 142
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
+ I V++++GEERF+K+IA I Y I T +LV+II K+ ++K+PA
Sbjct: 143 SDINKIYFVLKNFGEERFSKRIAYAIKDYCKKKKINNTFELVDIIKKATPIKNKFKHPAK 202
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRIYINQEL+ + L+ K L GR+ +ISFHSLEDRIVKNF+ +K +
Sbjct: 203 RTFQAIRIYINQELEEIKKGLENSLKILKPGGRLSIISFHSLEDRIVKNFMMKYSKKATV 262
Query: 482 DRRLPIYNYLFEPKMKFLARCKPK 505
LPI E K++ L CK K
Sbjct: 263 PYGLPIT----ENKLETLRICKLK 282
>gi|399116602|emb|CCG19409.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Taylorella asinigenitalis 14/45]
Length = 327
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 163/248 (65%), Gaps = 2/248 (0%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCF 299
+ +G+++D TFG+GGHS +L L + +L DKD +++ ++ D R ++H F
Sbjct: 38 KTSGVFVDGTFGRGGHSRYLLSLLDRDSKLFVFDKDPQAIEAAKQLKEEDERVEVVHGAF 97
Query: 300 TELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWL 359
+ + L + I+K+DGI DLGISS QI++ RGFSF+ DGPLDMRMD ++G +A++W+
Sbjct: 98 SSMQKSLSDFGIQKVDGITMDLGISSPQIDDGTRGFSFMRDGPLDMRMDNSKGQTAAEWI 157
Query: 360 ANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNP 419
+A + KVI++YGEERFA KIAK I R PI T +L E++ ++R ++ ++P
Sbjct: 158 NSADVELLAKVIKEYGEERFALKIAKAIASRRESNPIRTTHELAELVSANVRTREKGQHP 217
Query: 420 ATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIP 479
ATRTFQAIRIYIN+EL+ LS +L L + GR+ VISFHSLEDRIVK FI +
Sbjct: 218 ATRTFQAIRIYINEELEELSRSLATAIDLLKVGGRLSVISFHSLEDRIVKQFIAKESNPA 277
Query: 480 HIDRRLPI 487
RLPI
Sbjct: 278 SEFARLPI 285
>gi|385207882|ref|ZP_10034750.1| dinuclear metal center protein, YbgI/SA1388 family [Burkholderia
sp. Ch1-1]
gi|385180220|gb|EIF29496.1| dinuclear metal center protein, YbgI/SA1388 family [Burkholderia
sp. Ch1-1]
Length = 248
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR IN + TGVTAS ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRKINKLATGVTASAAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ LI N++NL+AYHLPLD HP+ GNNAQ+ + + RF +N++GW+
Sbjct: 78 RKYGRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ + + +G+ P+V GD +++ + WCTGAAQ + AIN G
Sbjct: 134 ----TFPMPITLAHFTAQVEQTLGRTPLVFGDAERELRRVAWCTGAAQGMFDAAINAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|77166320|ref|YP_344845.1| methyltransferase [Nitrosococcus oceani ATCC 19707]
gi|254435207|ref|ZP_05048714.1| S-adenosyl-methyltransferase MraW [Nitrosococcus oceani AFC27]
gi|88909205|sp|Q3J781.1|RSMH_NITOC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|76884634|gb|ABA59315.1| methyltransferase [Nitrosococcus oceani ATCC 19707]
gi|207088318|gb|EDZ65590.1| S-adenosyl-methyltransferase MraW [Nitrosococcus oceani AFC27]
Length = 315
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 180/270 (66%), Gaps = 6/270 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EAI L I R +G+YID TFG+GGH+ IL L +GRL+ +DKD +++ G+
Sbjct: 12 VLLREAIQALAI---RRDGLYIDGTFGRGGHAQAILAALSSEGRLLGVDKDPAAIAAGHA 68
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF+I+ +L ++ + +K+I+G+LFDLG+SS Q+ + RGFSFL DGPL
Sbjct: 69 LAQKDGRFTIVQASIGDLARVVSERGWLKRINGVLFDLGVSSPQLESAERGFSFLRDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ T G SA++WLANA E I +V++ YGEER+ ++IA+ I+ R + +TRTKQL
Sbjct: 129 DMRMNPTVGQSAAEWLANAKEKEIAEVLRVYGEERYCRRIARAIIQARELNSLTRTKQLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ K+I +R +PATR+FQAIRI+IN EL+ L AL+ L +KGR+ VISFHSL
Sbjct: 189 EVVAKAIPRWERRMHPATRSFQAIRIFINHELEELRAALEQALAALAVKGRLAVISFHSL 248
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
EDRIVK F + + LP+ F+
Sbjct: 249 EDRIVKRFFREKARGEELPPDLPVMQKDFQ 278
>gi|358448195|ref|ZP_09158700.1| hypothetical protein KYE_02915 [Marinobacter manganoxydans MnI7-9]
gi|357227623|gb|EHJ06083.1| hypothetical protein KYE_02915 [Marinobacter manganoxydans MnI7-9]
Length = 247
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 150/217 (69%), Gaps = 10/217 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + ++DYCPNGLQVEG S IN +++GVTAS LI+ A++ NAD ILVHHGYFWKGE+
Sbjct: 15 LQPENFQDYCPNGLQVEGTSEINTVISGVTASKALIEAAIEANADMILVHHGYFWKGEDQ 74
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+K++RL+QL+ N INL AYHLPLD HP+ GNN QLA ILN R + W G
Sbjct: 75 RIQGMKRERLKQLLDNDINLVAYHLPLDDHPEYGNNRQLASILNIKNPRPLG--GLVWEG 132
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ ++ ++ + HI R++ ++P+ +G+ I +GWCTGAAQ + A++
Sbjct: 133 EL--------EEAMSPEKFGLHIARQLHREPLWVGEGPAAIKRVGWCTGAAQGFINTALD 184
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G+ AYISGEISE T + +RE G+ Y+AAGHHATERY
Sbjct: 185 AGLDAYISGEISEPTTHTARECGIHYYAAGHHATERY 221
>gi|84625268|ref|YP_452640.1| S-adenosyl-methyltransferase MraW [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188575290|ref|YP_001912219.1| S-adenosyl-methyltransferase MraW [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|84369208|dbj|BAE70366.1| cell division protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519742|gb|ACD57687.1| S-adenosyl-methyltransferase MraW [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 347
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 161/259 (62%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD +++++ + D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPDAIAVAEQTFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAQWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ATDREIADVLWAYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIYINRELDDLETGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 272 NRRLPEAQP-FVPTLQLVS 289
>gi|374368285|ref|ZP_09626337.1| putative metal-binding protein [Cupriavidus basilensis OR16]
gi|373100166|gb|EHP41235.1| putative metal-binding protein [Cupriavidus basilensis OR16]
Length = 248
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 148/217 (68%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +Y+DYCPNG QV+GR + I TGVTASL L++ A++ ADAILVHHGYFWK E++
Sbjct: 14 LQVPRYKDYCPNGWQVQGRPEVEHIATGVTASLALVEAAIEAGADAILVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
++G K RL++L+ +NL+AYHLPLD HP+ GNNAQL L F+ T RF + +GW G
Sbjct: 74 RVIGQKHARLKRLLGADVNLFAYHLPLDDHPEFGNNAQLGLQLGFTPTGRFGEGQLGWTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + + L H+ + ++P+ IGD + I +GWCTG AQ L A+
Sbjct: 134 TL--------PQSMPLCALAAHVGGVLNREPLAIGDPEQLIRTVGWCTGGAQGYLDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AY+SGEISE T +++RESGVAY AAGHHATERY
Sbjct: 186 AGVDAYLSGEISEQTTHLARESGVAYLAAGHHATERY 222
>gi|263506507|sp|Q2NZB1.2|RSMH_XANOM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263506516|sp|B2SNY6.2|RSMH_XANOP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 337
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 161/259 (62%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD +++++ + D+R SI F
Sbjct: 25 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPDAIAVAEQTFGGDARVSIHRGSFAG 84
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 85 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAQWLAQ 141
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 142 ATDREIADVLWAYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 201
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 202 RSFQAIRIYINRELDDLETGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 261
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 262 NRRLPEAQP-FVPTLQLVS 279
>gi|254449029|ref|ZP_05062483.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium HTCC5015]
gi|198261423|gb|EDY85714.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium HTCC5015]
Length = 309
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 168/263 (63%), Gaps = 6/263 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EAI L IE NG+Y+D TFG+GGHS IL +LG G+L AID+D +V + +
Sbjct: 10 VLLAEAIEGLRIEE---NGVYLDGTFGRGGHSAAILSQLGVDGQLHAIDRDRAAVDVAQQ 66
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D+RFSI H F++LD ++ + +++G+L D+G+SS QI++ RGFSF DGPL
Sbjct: 67 RFAEDARFSIHHGEFSQLDQYCEQRGLAGRLNGVLLDIGVSSPQIDDPGRGFSFQFDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD TRG +A++WL +A I +V++++GEER AK+IA I I T+ LV
Sbjct: 127 DMRMDQTRGETAAQWLVSAEASEIARVLKEFGEERNAKRIASAIKRTLQERSIETTQGLV 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I + R R+K+PATR+FQA+RI +N E+ L AL + L GR+ VISFHSL
Sbjct: 187 AVIESATRVRDRHKHPATRSFQALRIQVNDEMGALRRALDAAVRMLAPGGRLAVISFHSL 246
Query: 464 EDRIVKNFINFNTKIPHIDRRLP 486
EDR+VK FI + + R LP
Sbjct: 247 EDRMVKRFIRDESTPREVARGLP 269
>gi|414562584|ref|YP_005617775.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087120|gb|ADP67200.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 312
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS 290
E I+ L I+ NGIYID+TFG GGHS +IL++LG+ GRL +ID+D + S+G+KI DS
Sbjct: 14 ELIDSLKIKK---NGIYIDSTFGTGGHSNEILKKLGQSGRLYSIDRDPIAFSIGSKIKDS 70
Query: 291 RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDI 349
RF II+ F++L D + I K++GI+FDLG+SS QI++ RGFSF DGPLDMRM+
Sbjct: 71 RFHIINENFSKLLDFAKNEKIIGKVNGIIFDLGVSSIQIDDYRRGFSFKNDGPLDMRMNP 130
Query: 350 TRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKS 409
GISAS+WL + I V++++GEERF++KIA I I IT T +L II K+
Sbjct: 131 NYGISASEWLFESNVKEISFVLKNFGEERFSRKIAYAIKRRSQIKKITSTLELANIIKKT 190
Query: 410 IRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVK 469
I ++K+PA R+FQAIRIYINQEL+ + AL+ K L GRI +ISFHSLEDR+VK
Sbjct: 191 IPTKNKFKHPARRSFQAIRIYINQELEEIQKALESTLKILKPGGRISIISFHSLEDRLVK 250
Query: 470 NFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
F+ N+ I +PI E ++ L CK K
Sbjct: 251 KFMIKNSTKAIIPYGMPIT----EEQLNRLTTCKLK 282
>gi|421483510|ref|ZP_15931085.1| NGG1p interacting factor 3 family protein [Achromobacter piechaudii
HLE]
gi|400198233|gb|EJO31194.1| NGG1p interacting factor 3 family protein [Achromobacter piechaudii
HLE]
Length = 258
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 157/224 (70%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGRS + I+TGVTAS L++TAV+ ADA+LVHHG+ W+ E+
Sbjct: 17 LQAARFKDYCPNGLQVEGRSEVGHIITGVTASEALLRTAVERGADAVLVHHGWMWRNEDR 76
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR-------FSK 620
I+G ++ R+ + N +NLYAYHLPLD HP LGNNAQLA++L + RR +
Sbjct: 77 RIIGTRRTRMALALKNDLNLYAYHLPLDAHPTLGNNAQLARVLGLTPERRDDGSARTCGQ 136
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+N+ W+G+ ++ T+ L + ++ ++P+V+GD ++ + + WCTG AQ
Sbjct: 137 DNLVWLGEATGVQ--------TLGQLGARVAERLSRQPLVVGDPDQPVSRVAWCTGGAQG 188
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+L DA++ GV+AYI+GE+SESTV+++RE+GV + AAGHHATER+
Sbjct: 189 MLADAVDAGVSAYITGEVSESTVHLARETGVGFIAAGHHATERF 232
>gi|335042187|ref|ZP_08535214.1| protein of unknown function DUF34 [Methylophaga aminisulfidivorans
MP]
gi|333788801|gb|EGL54683.1| protein of unknown function DUF34 [Methylophaga aminisulfidivorans
MP]
Length = 252
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 149/217 (68%), Gaps = 5/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++ DYCPNGLQVEGR I +VTGVTAS L++ A+++NADAILVHHGYFW+GE++
Sbjct: 15 LEPERFNDYCPNGLQVEGREEITTLVTGVTASEALLEEAIELNADAILVHHGYFWRGEDA 74
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I+G+K++RL L+ N INL AYHLPLD HP LGNNAQLA++L R S IG
Sbjct: 75 RIIGMKQRRLRLLLENDINLIAYHLPLDAHPTLGNNAQLAELLGIEVDGRISGMGEPAIG 134
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+L + +++ H+ +K+ + P+VI ++ I +GWCTGAAQ L A
Sbjct: 135 LCGSL-----PEPLSLSAFSSHVRQKLKRDPLVIQGHDRPITTVGWCTGAAQGYLQYAAE 189
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G+ YISGEISE TV+++RE G+ Y AAGHHATERY
Sbjct: 190 LGLDLYISGEISEPTVHMARELGINYMAAGHHATERY 226
>gi|385332167|ref|YP_005886118.1| NGG1p interacting factor 3, NIF3 [Marinobacter adhaerens HP15]
gi|311695317|gb|ADP98190.1| NGG1p interacting factor 3, NIF3 [Marinobacter adhaerens HP15]
Length = 247
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 150/217 (69%), Gaps = 10/217 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + ++DYCPNGLQVEG S+I +++GVTAS LI+ A++ NAD ILVHHGYFWKGE+
Sbjct: 15 LQPENFQDYCPNGLQVEGTSDIKTVISGVTASKALIEAAIEANADMILVHHGYFWKGEDQ 74
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+K++RL+QL+ N INL AYHLPLD HP+ GNN QLA +LN R + W G
Sbjct: 75 RIQGMKRERLKQLLDNDINLVAYHLPLDDHPEYGNNRQLADVLNIKNPRPLG--GLVWEG 132
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ ++ ++ + HI R++ ++P+ +GD I +GWCTGAAQ + A++
Sbjct: 133 EL--------EEAMSPEKFGLHIARQLHREPLWVGDGPAAIKRVGWCTGAAQGFINTAMD 184
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G+ AYISGEISE T + +RE G+ Y+AAGHHATERY
Sbjct: 185 AGLDAYISGEISEPTTHTARECGIHYYAAGHHATERY 221
>gi|372269630|ref|ZP_09505678.1| S-adenosyl-methyltransferase MraW [Marinobacterium stanieri S30]
Length = 312
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 182/280 (65%), Gaps = 7/280 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ L + +G YID TFG+GGHS +LE+L ++G+L+AIDKD E+++ ++
Sbjct: 10 VLLDEAVRELVHDP---DGFYIDGTFGRGGHSALVLEQLSEQGQLMAIDKDPEAIAHAHQ 66
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I H F EL ++K + K+ G+L DLG+SS Q+++ RGFSF+ DGPL
Sbjct: 67 RFADDERFCIEHGSFAELQSFVEKRGLMGKVSGVLLDLGVSSPQLDDPDRGFSFINDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD + G SA+ W+ A+E I V+ YGEERF++++A+ IV R+ PIT T +L
Sbjct: 127 DMRMDTSSGESAADWINRASETEIADVMYQYGEERFSRRMARAIVEQRAEEPITTTARLA 186
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+II ++ ++ K+PATR FQ IRI+IN+EL ++ L + L GR+VVISFHSL
Sbjct: 187 KIISEANPRWEKGKHPATRAFQGIRIHINRELADVEACLDQALEVLEPGGRLVVISFHSL 246
Query: 464 EDRIVKNFINFNTK-IPHIDRRLPIYNYLFEPKMKFLARC 502
EDR+VK FI + K H+ +P + + + ++K + +
Sbjct: 247 EDRLVKRFIRRHVKGDEHLPPGVPFTDDMLKRRLKSVGKA 286
>gi|384226032|ref|YP_005617195.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311086539|gb|ADP66620.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 302
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS 290
E I+ L I+ NGIYID+TFG GGHS +IL++LG+ GRL +ID+D + S+G+KI DS
Sbjct: 4 ELIDSLKIKK---NGIYIDSTFGTGGHSNEILKKLGQSGRLYSIDRDPIAFSIGSKIKDS 60
Query: 291 RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDI 349
RF II+ F++L D + I K++GI+FDLG+SS QI++ RGFSF DGPLDMRM+
Sbjct: 61 RFHIINENFSKLLDFAKNEKIIGKVNGIIFDLGVSSIQIDDYRRGFSFKNDGPLDMRMNP 120
Query: 350 TRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKS 409
GISAS+WL + I V++++GEERF++KIA I I IT T +L II K+
Sbjct: 121 NYGISASEWLFESNVKEISFVLKNFGEERFSRKIAYAIKRRSQIKKITSTLELANIIKKT 180
Query: 410 IRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVK 469
I ++K+PA R+FQAIRIYINQEL+ + AL+ K L GRI +ISFHSLEDR+VK
Sbjct: 181 IPTKNKFKHPARRSFQAIRIYINQELEEIQKALESTLKILKPGGRISIISFHSLEDRLVK 240
Query: 470 NFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
F+ N+ I +PI E ++ L CK K
Sbjct: 241 KFMIKNSTKAIIPYGMPIT----EEQLNRLTTCKLK 272
>gi|452124022|ref|ZP_21936606.1| 16S rRNA m(4)C1402 methyltransferase [Bordetella holmesii F627]
gi|452127408|ref|ZP_21939989.1| 16S rRNA m(4)C1402 methyltransferase [Bordetella holmesii H558]
gi|451923252|gb|EMD73393.1| 16S rRNA m(4)C1402 methyltransferase [Bordetella holmesii F627]
gi|451926688|gb|EMD76818.1| 16S rRNA m(4)C1402 methyltransferase [Bordetella holmesii H558]
Length = 357
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 173/266 (65%), Gaps = 3/266 (1%)
Query: 239 ENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIH 296
E+ R G ++D TFG+GGHS ++L RLG + RL+ DKD +++++ + D R ++H
Sbjct: 39 ESRRAGGTFVDGTFGRGGHSRELLSRLGPQARLVVFDKDPQAIAVAQALAAEDGRVQVVH 98
Query: 297 NCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISAS 356
F + L I+++DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD +RG + +
Sbjct: 99 GGFATMAEALMDRGIEQVDGVMLDLGVSSPQIDDAQRGFSFMRDGPLDMRMDTSRGPTVA 158
Query: 357 KWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRY 416
+WLA A+ +++VI DYGEERFA ++AK I + P+ T +L E + ++R ++
Sbjct: 159 EWLAQASVEEMREVIADYGEERFAFQVAKAIAARCATRPLRTTLELAECVASAVRTREKG 218
Query: 417 KNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
++PATRTFQA+RIYIN+EL+ L+ AL + L GR+ VISFHSLEDR+VK I
Sbjct: 219 QHPATRTFQALRIYINRELEELARALASAIELLAPGGRLAVISFHSLEDRMVKQCIAAAA 278
Query: 477 KIPHIDRRLPIY-NYLFEPKMKFLAR 501
+ RLP+ + L +P ++ L +
Sbjct: 279 RPAAAHPRLPLRESELPQPILQSLGK 304
>gi|187479357|ref|YP_787382.1| S-adenosyl-methyltransferase MraW [Bordetella avium 197N]
gi|123738495|sp|Q2KVE4.1|RSMH_BORA1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|115423944|emb|CAJ50496.1| S-adenosyl-methyltransferase [Bordetella avium 197N]
Length = 355
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 173/261 (66%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
GI++D TFG+GGHS ++L RLG + RL+ DKD E++++ + D+R +++H F
Sbjct: 44 TGIFVDGTFGRGGHSRELLGRLGPQARLVVFDKDPEAIAVAQALAAEDARVTVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L I++IDG++ DLG+SS QI++ RGFSF+ +GPLDMRMD +RG + + WLA
Sbjct: 104 MTEELAARGIERIDGVMLDLGVSSPQIDDADRGFSFMREGPLDMRMDTSRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVEEMREVIADYGEERFAFQVAKAIAARRATRPLHTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ AL + L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARALASAIELLVPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + L +P ++ L +
Sbjct: 284 HPRLPLRESELPQPILQTLGK 304
>gi|307731159|ref|YP_003908383.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585694|gb|ADN59092.1| protein of unknown function DUF34 [Burkholderia sp. CCGE1003]
Length = 248
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 143/213 (67%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR I + TGVTAS+ ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRKIGKLATGVTASVAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ L+ N +NL+AYHLPLD HP+LGNNAQ+A + + RF +N++GW+
Sbjct: 78 RKYARLKLLLGNDLNLFAYHLPLDDHPELGNNAQIAAKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ I + +G+ P+V GD ++ + + WCTGAAQ + AIN G
Sbjct: 134 ----TFAMPITLAHFTAEIEQTLGRTPLVFGDQDRMLRRVAWCTGAAQGMFDAAINAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|30249480|ref|NP_841550.1| hypothetical protein NE1509 [Nitrosomonas europaea ATCC 19718]
gi|30138843|emb|CAD85420.1| Domain of unknown function DUF34 [Nitrosomonas europaea ATCC 19718]
Length = 248
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L I+++ DYCPNGLQVEGR++I +V+GVTAS LI+ AV + ADAI+VHHGYFW+GE++
Sbjct: 14 LGIQQFRDYCPNGLQVEGRTSIQTLVSGVTASQALIQAAVGLRADAIIVHHGYFWRGEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ G+K+ R+ LI + INLYAYHLPLD H +LGNN QL K L RF + NI G
Sbjct: 74 CLRGMKRHRIATLIKHDINLYAYHLPLDAHTELGNNTQLGKKLGIVEAGRFGEQNIAAYG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+F + +++ +L + + +G+KP++IGD K + + WCTGAAQ+ +AI
Sbjct: 134 --------HFPESVSLDELSNLLNSVLGRKPLIIGDPLKPVRRVAWCTGAAQSYFEEAIR 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV +I+GEISE V+ +RESG A+ +AGHHATERY
Sbjct: 186 LGVDIFITGEISEQNVHTARESGTAFISAGHHATERY 222
>gi|415911020|ref|ZP_11553341.1| NIF3 domain containing protein [Herbaspirillum frisingense GSF30]
gi|407762334|gb|EKF71205.1| NIF3 domain containing protein [Herbaspirillum frisingense GSF30]
Length = 213
Score = 231 bits (590), Expect = 8e-58, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 143/193 (74%), Gaps = 6/193 (3%)
Query: 532 IVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYH 591
+V+GVTASL LI+ A D ADAILVHHGYFW+GE+ ++G K++RL+ L+ + INL+ YH
Sbjct: 1 MVSGVTASLALIEAARDWQADAILVHHGYFWRGEDMRVIGQKQRRLKLLLAHDINLFGYH 60
Query: 592 LPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHIT 651
LPLD HP+LGNNAQLAK L+F T RF +N+IGWIG R + + T DL I
Sbjct: 61 LPLDSHPELGNNAQLAKRLDFEATGRFGENDIGWIG------RCHASSVKTAADLVMLIE 114
Query: 652 RKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGV 711
+++G+ P++IGD + + ++ WCTGAAQ +L +AI+ G + YISGEISE TV+++RE+G
Sbjct: 115 KRLGRMPLLIGDPQQPVGKVAWCTGAAQGMLGEAIDAGASVYISGEISEPTVHLARETGT 174
Query: 712 AYFAAGHHATERY 724
Y AAGHHATERY
Sbjct: 175 LYLAAGHHATERY 187
>gi|336316973|ref|ZP_08571851.1| S-adenosyl-methyltransferase MraW [Rheinheimera sp. A13L]
gi|335878625|gb|EGM76546.1| S-adenosyl-methyltransferase MraW [Rheinheimera sp. A13L]
Length = 312
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 172/264 (65%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E I+ L I + +GIY+D TFG+GGHS IL +LG++GRL ID+D +++
Sbjct: 9 VLLAETIDGLAI---KPDGIYLDGTFGRGGHSRVILSKLGEQGRLYGIDRDPAAIAAAAP 65
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ RFSI H+ F L I + + I K+DGIL DLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 66 LLADPRFSITHSPFAALAQIAEDHGITGKVDGILLDLGVSSPQLDDAERGFSFMRDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T GISA+ WLA A +I V+++YGEE+ A +IA IV RS P+TRT QL
Sbjct: 126 MRMDPTSGISAADWLAKADVEDITFVLREYGEEKSAWRIANAIVDSRSEQPLTRTSQLAS 185
Query: 405 IILKSI-RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I + + +K K+PATR+FQ IRIYIN EL + AL+ L GR+ VISFHSL
Sbjct: 186 LISTVVPKSHKEKKHPATRSFQGIRIYINSELDQIKTALEAAVHVLKPGGRLTVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK F+ +K I + LP+
Sbjct: 246 EDRMVKQFMRLKSKGAAIPKGLPL 269
>gi|219682152|ref|YP_002468536.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|254813208|sp|B8D7C6.1|RSMH_BUCAT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|219621885|gb|ACL30041.1| hypothetical protein BUAPTUC7_222 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
Length = 312
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS 290
E I+ L I+ NGIYID+TFG GGHS +IL++LG+ GRL +ID+D + S+G+KI DS
Sbjct: 14 ELIDSLKIKK---NGIYIDSTFGTGGHSNEILKKLGQSGRLYSIDRDPIAFSIGSKIKDS 70
Query: 291 RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDI 349
RF II+ F++L D + I K++GI+FDLG+SS QI++ RGFSF DGPLDMRM+
Sbjct: 71 RFHIINENFSKLLDFAKNEKIIGKVNGIIFDLGVSSIQIDDYRRGFSFKNDGPLDMRMNP 130
Query: 350 TRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKS 409
GISAS+WL + I V++++GEERF++KIA I I IT T +L II K+
Sbjct: 131 NYGISASEWLFESNVKEISFVLKNFGEERFSRKIAYAIKRRSQIKKITSTLELANIIKKT 190
Query: 410 IRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVK 469
I ++K+PA R+FQAIRIYINQEL+ + AL+ K L GRI +ISFHSLEDR+VK
Sbjct: 191 IPTKNKFKHPARRSFQAIRIYINQELEEIHKALESTLKILKPGGRISIISFHSLEDRLVK 250
Query: 470 NFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
F+ N+ I +PI E ++ L CK K
Sbjct: 251 KFMIKNSTKAIIPYGMPIT----EEQLNRLTTCKLK 282
>gi|384227087|ref|YP_005618837.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311085963|gb|ADP66045.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 302
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS 290
E I+ L I+ NGIYID+TFG GGHS +IL++LG+ GRL +ID+D + S+G+KI DS
Sbjct: 4 ELIDSLKIKK---NGIYIDSTFGTGGHSNEILKKLGQSGRLYSIDRDPIAFSIGSKIKDS 60
Query: 291 RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDI 349
RF II+ F++L D + I K++GI+FDLG+SS QI++ RGFSF DGPLDMRM+
Sbjct: 61 RFHIINENFSKLLDFAKNEKIIGKVNGIIFDLGVSSIQIDDYRRGFSFKNDGPLDMRMNP 120
Query: 350 TRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKS 409
GISAS+WL + I V++++GEERF++KIA I I IT T +L II K+
Sbjct: 121 NYGISASEWLFESNIKEISFVLKNFGEERFSRKIAYAIKRRSQIKKITSTLELANIIKKT 180
Query: 410 IRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVK 469
I ++K+PA R+FQAIRIYINQEL+ + AL+ K L GRI +ISFHSLEDR+VK
Sbjct: 181 IPTKNKFKHPARRSFQAIRIYINQELEEIQKALESTLKILKPGGRISIISFHSLEDRLVK 240
Query: 470 NFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
F+ N+ I +PI E ++ L CK K
Sbjct: 241 KFMIKNSTKAIIPYGMPIT----EEQLNRLTTCKLK 272
>gi|94501904|ref|ZP_01308414.1| S-adenosyl-methyltransferase [Oceanobacter sp. RED65]
gi|94425957|gb|EAT10955.1| S-adenosyl-methyltransferase [Oceanobacter sp. RED65]
Length = 308
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 181/289 (62%), Gaps = 6/289 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+ LN + +G+Y+D TFG+GGH+ +L++L ++GR+I IDKD +++ G +
Sbjct: 7 VLLHEAVEALNQDP---DGLYVDCTFGRGGHTKLLLDQLSEQGRVIGIDKDPRAIATGQE 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I H F +L ++ + K++ G+L DLG+SS Q++ RGFSF+ DGPL
Sbjct: 64 LMAQDQRFQICHGSFAQLREFVEAHGQGKELSGVLMDLGVSSPQLDEAERGFSFMQDGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ GI+A +W+A A+E I V ++GEER ++++A+ IV R+I P TRT L
Sbjct: 124 DMRMNTEAGITAQEWIATASEEEIANVFYEFGEERASRRLARAIVERRAIEPFTRTLDLA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I + ++ K+PATR+FQ +RI++N EL +L L + L GR+VVISFHSL
Sbjct: 184 EVIKHAHPRWEKNKHPATRSFQGLRIFLNNELGDLESVLDETVEMLAKGGRLVVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKK 512
EDRIVK FI K P + LPI +K + + K +++
Sbjct: 244 EDRIVKRFIRDKEKGPQLPPDLPIMEQDAPRPLKHIGKAIKASKEEVEQ 292
>gi|91785366|ref|YP_560572.1| hypothetical protein Bxe_A0413 [Burkholderia xenovorans LB400]
gi|91689320|gb|ABE32520.1| Protein of unknown function DUF34 [Burkholderia xenovorans LB400]
Length = 248
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 142/213 (66%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR IN + TGVTAS ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRRINRLATGVTASAAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ LI N++NL+AYHLPLD HP+ GNNAQ+ + + RF +N++GW+
Sbjct: 78 RKYGRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ + + +G+ P+V GD +++ + WCTGAAQ + AI+ G
Sbjct: 134 ----TFPMPITLAHFTAQVEQTLGRTPLVFGDAERELRRVAWCTGAAQGMFDAAIDAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|377821802|ref|YP_004978173.1| hypothetical protein BYI23_A023580 [Burkholderia sp. YI23]
gi|357936637|gb|AET90196.1| hypothetical protein BYI23_A023580 [Burkholderia sp. YI23]
Length = 248
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 140/216 (64%), Gaps = 10/216 (4%)
Query: 510 IKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI 569
I +++DYCPNGLQVEG + I TGVTASL ++ A + AD +LVHHGYFW+ E I
Sbjct: 16 IGRFKDYCPNGLQVEGARRVRKIATGVTASLAFLEAAAEWGADTVLVHHGYFWRNEAPQI 75
Query: 570 VGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKI 629
G K +RL LI N INL+AYHLPLD HP+LGNNAQ+ L RF+ ++GW+ +
Sbjct: 76 TGRKHRRLRTLIANDINLFAYHLPLDSHPELGNNAQIGARLGLIADSRFADQDLGWVATL 135
Query: 630 -INLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINE 688
+ L +F + + +G+KP+V GD +K++ + WCTG AQ DAI
Sbjct: 136 GMPLPLEHFSAM---------VENALGRKPLVFGDTDKELRRVAWCTGGAQGYFEDAIAA 186
Query: 689 GVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGE+SE T++I+ ESGVAY AAGHHATERY
Sbjct: 187 GADVYLSGEVSEQTMHIAAESGVAYIAAGHHATERY 222
>gi|148244441|ref|YP_001219135.1| S-adenosyl-methyltransferase [Candidatus Vesicomyosocius okutanii
HA]
gi|263504496|sp|A5CX97.1|RSMH_VESOH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|146326268|dbj|BAF61411.1| S-adenosyl-methyltransferase [Candidatus Vesicomyosocius okutanii
HA]
Length = 307
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 177/263 (67%), Gaps = 6/263 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ NE++ LNI + +GIYIDATFG+GGH+ IL RL KKGRLIA D+D ++ NK
Sbjct: 9 VMFNESMYALNI---KTDGIYIDATFGRGGHAQGILNRLSKKGRLIAFDQDINAIEYANK 65
Query: 287 -ITDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D+R ++IH+ F++ L II K+ I +IDGIL DLG+SS Q+ N RGFSF +DGPLD
Sbjct: 66 NLVDNRLTLIHSAFSKMLSIITKQGLIGRIDGILIDLGVSSPQLENAQRGFSFRVDGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ T G+SA++WL +A E I VI + E+ ++ IA +I Y+ + T +L
Sbjct: 126 MRMNQTTGMSATQWLKSANEEEIANVIYQFSNEKKSRHIANKIKKYQKNHVLETTLELAN 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ K ++ K K+PATRTFQAIRI+INQELK L L+ L+ GR+ +ISFHS+E
Sbjct: 186 IVSKVVKKQKN-KHPATRTFQAIRIFINQELKQLISVLEQSKDILSKNGRLSIISFHSIE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPI 487
DRIVK FI N++ + + LPI
Sbjct: 245 DRIVKRFIQKNSRQKTLPKGLPI 267
>gi|358635810|dbj|BAL23107.1| hypothetical protein AZKH_0768 [Azoarcus sp. KH32C]
Length = 248
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + +Y DY PNGLQVEGR + ++ GVTAS L+ AV DA+LVHHGYFW+GE+
Sbjct: 14 LEVARYRDYSPNGLQVEGRPEVQRVLCGVTASQQLLDLAVAGAYDAVLVHHGYFWRGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ G++K+RL L+ + I+L AYHLPLD HP LGNNAQL + ++ RF + ++GWIG
Sbjct: 74 RVTGVRKRRLAALLNHDISLIAYHLPLDAHPTLGNNAQLGVLAGWTGEGRFGEQDLGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ N++ + + ++G++P+++GD+++ + + WCTG AQ AI
Sbjct: 134 RPANMEPAGL--------VARALAARLGREPLLVGDIDRMVRRVAWCTGGAQGYFEQAIA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGEISE TV+++RESGV + AAGHHATERY
Sbjct: 186 AGADLYVSGEISEQTVHLARESGVPFVAAGHHATERY 222
>gi|325923945|ref|ZP_08185535.1| S-adenosyl-methyltransferase MraW [Xanthomonas gardneri ATCC 19865]
gi|325545571|gb|EGD16835.1| S-adenosyl-methyltransferase MraW [Xanthomonas gardneri ATCC 19865]
Length = 352
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 156/245 (63%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L+ LG GRL+ +DKD E++++ + D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLQHLGPGGRLLVMDKDPEAIAVAEQAFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA+
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDVGQSAAEWLAH 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL E+I + +PAT
Sbjct: 152 ASDREIADVLWTYGEERQSRRIARAIVARRTEQPLLRTAQLAELIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIYINRELDDLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLP 486
+RRLP
Sbjct: 272 NRRLP 276
>gi|374620466|ref|ZP_09693000.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium HIMB55]
gi|374303693|gb|EHQ57877.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium HIMB55]
Length = 304
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 172/264 (65%), Gaps = 7/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+++ L++ R +G Y+D TFG+GGHS +IL L G+L+A+DKD + +
Sbjct: 9 VLLAESVSALSV---RADGSYLDGTFGRGGHSREILSLLSPSGQLMAVDKDPAAEASAKA 65
Query: 287 I-TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
DSRF + F ++ + ++ DGIL DLG+SS Q+++ RGF F DGPLDM
Sbjct: 66 FADDSRFKFVAGSFADISNFVSDGSL---DGILLDLGVSSPQLDDAARGFGFSGDGPLDM 122
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD G++A++W+A+A E I VI+ YGEERFAK++A IV R TPIT T+QL I
Sbjct: 123 RMDTRSGMTAAEWIASAPEQEIADVIKTYGEERFAKRMASAIVKVRVDTPITGTRQLASI 182
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I ++ + K+PATR FQAIRI+IN+EL++L +AL KL I GR+VVISFHSLED
Sbjct: 183 IAEANPKWEPNKHPATRAFQAIRIFINRELEDLELALSSMVDKLVIGGRLVVISFHSLED 242
Query: 466 RIVKNFINFNTKIPHIDRRLPIYN 489
RIVK F+ + + R +P+ +
Sbjct: 243 RIVKRFMRDQARGVQLPRHVPVVD 266
>gi|374621713|ref|ZP_09694243.1| hypothetical protein ECTPHS_01774 [Ectothiorhodospira sp. PHS-1]
gi|373940844|gb|EHQ51389.1| hypothetical protein ECTPHS_01774 [Ectothiorhodospira sp. PHS-1]
Length = 249
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 152/217 (70%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
LN+ + DY PNGLQV+GR +++ +VTGVTAS LI+ A++ ADA+LVHHGYFWKGE++
Sbjct: 15 LNVGAFTDYSPNGLQVQGRPHVSRLVTGVTASRALIEAAIEQGADALLVHHGYFWKGEDA 74
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
IVG+K++RL L+ + I+L AYHLPLD HP+LGNNAQLA++L+F + +G+ G
Sbjct: 75 RIVGMKRERLRLLLTHDISLLAYHLPLDAHPELGNNAQLARLLDFQVQGVLRPDGVGFFG 134
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ + L ++R++G++ + I + I +GWCTG AQ ++ A
Sbjct: 135 VP--------DAPLSAQALGERLSRRLGREALWIPGGPEMIRRLGWCTGGAQGMVERAAE 186
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G+ AYISGE+SE TV+++RE+G+ YFAAGHHATERY
Sbjct: 187 LGLDAYISGEVSEQTVHVAREAGIHYFAAGHHATERY 223
>gi|311103994|ref|YP_003976847.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310758683|gb|ADP14132.1| S-adenosyl-methyltransferase MraW [Achromobacter xylosoxidans A8]
Length = 364
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 173/261 (66%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
+G+++D TFG+GGHS ++L RLGK RL+ DKD E++++ N + D R +++H F
Sbjct: 44 DGVFVDGTFGRGGHSRELLGRLGKAARLVVFDKDPEAIAVANALAAADPRVTVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L++ I K+DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELEQLGIGKVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLRTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ L L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARTLAAALDLLAPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + + +P ++ L R
Sbjct: 284 HARLPLRESEMPQPVLRSLGR 304
>gi|90020487|ref|YP_526314.1| S-adenosyl-methyltransferase MraW [Saccharophagus degradans 2-40]
gi|123277667|sp|Q21MH7.1|RSMH_SACD2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|89950087|gb|ABD80102.1| S-adenosyl-methyltransferase MraW [Saccharophagus degradans 2-40]
Length = 312
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 175/281 (62%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++ L ++ G Y+D TFG+GGHS IL +LG +G+L IDKD E+V++G
Sbjct: 9 VLLQESVESLVVDP---AGTYVDGTFGRGGHSRAILAKLGPEGKLFGIDKDPEAVAVGKA 65
Query: 287 IT--DSRFSIIHNCFTEL---DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDG 341
+ DSRF I+H F +L D++ + + G+L DLG+SS Q++ RGFSF+ DG
Sbjct: 66 LEAEDSRFRIVHGSFADLKHIDLLQADFAAGGLSGVLVDLGVSSPQLDVAERGFSFMNDG 125
Query: 342 PLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQ 401
PLDMRM+ G++A++W+ A + +I +V+ +YGEERF++ +AK IV R I P TRT
Sbjct: 126 PLDMRMNTEAGMTAAEWINTAKQEDIAQVLWEYGEERFSRHMAKAIVERREIKPFTRTHD 185
Query: 402 LVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
E++ + R ++ K+PATR FQA+RI+IN+EL++L L L GR VVISFH
Sbjct: 186 FAEVVKAANRKWEKGKHPATRAFQAVRIFINRELEDLRQLLDDSVSVLAPGGRFVVISFH 245
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
SLEDR+VK F + + LP+ + + +K + +
Sbjct: 246 SLEDRMVKRFFRDQSMGKQFPKGLPVTEEMKKQNLKIIGKA 286
>gi|419953395|ref|ZP_14469540.1| hypothetical protein YO5_04032 [Pseudomonas stutzeri TS44]
gi|387969987|gb|EIK54267.1| hypothetical protein YO5_04032 [Pseudomonas stutzeri TS44]
Length = 252
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/228 (46%), Positives = 155/228 (67%), Gaps = 8/228 (3%)
Query: 497 KFLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILV 556
K +A C + LN+ K DYCPNGLQVEGR+ + IV+GVTAS L+ AV AD +LV
Sbjct: 7 KLVAECD--RYLNVAKIADYCPNGLQVEGRAQVRRIVSGVTASQALLDAAVQAQADVVLV 64
Query: 557 HHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTR 616
HHGYFWK E++ +VG+K++RL+ L+ + ++L AYHLPLDMHP++GNN QLA++L
Sbjct: 65 HHGYFWKNEDARVVGMKQRRLKTLLSHDMSLLAYHLPLDMHPEVGNNVQLARVLELLAEG 124
Query: 617 RFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTG 676
+N +G I +L + ++ + + + +G++P++I D + I I WCTG
Sbjct: 125 PLEPDNPKSVGLIGSL-----RSPMSPAEFQRRVQQALGREPLLI-DGQRPIRRIAWCTG 178
Query: 677 AAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AQ + A+ GV AY++GE+SE TV+I+RE+G+++FAAGHHATERY
Sbjct: 179 GAQGYIEQAVAAGVDAYLTGEVSEPTVHIARENGLSFFAAGHHATERY 226
>gi|15616841|ref|NP_240054.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681595|ref|YP_002467981.1| S-adenosyl-methyltransferase MraW [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471280|ref|ZP_05635279.1| hypothetical protein BaphL_01110 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387278|sp|P57319.1|RSMH_BUCAI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|254813207|sp|B8D922.1|RSMH_BUCA5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|25302081|pir||D84956 hypothetical protein [imported] - Buchnera sp. (strain APS)
gi|10038905|dbj|BAB12940.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219624438|gb|ACL30593.1| hypothetical protein BUAP5A_220 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 312
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS 290
E I+ L I+ NGIYID+TFG GGHS +IL++LG+ GRL +ID+D + S+G++I DS
Sbjct: 14 ELIDSLKIKK---NGIYIDSTFGTGGHSNEILKKLGQNGRLYSIDRDPIAFSIGSEIKDS 70
Query: 291 RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDI 349
RF II+ F++L D + I K++GI+FDLG+SS QI++ RGFSF DGPLDMRM+
Sbjct: 71 RFHIINENFSKLLDFAKNEKIIGKVNGIIFDLGVSSIQIDDYRRGFSFKNDGPLDMRMNP 130
Query: 350 TRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKS 409
GISAS+WL + I V++++GEERF++KIA I I IT T +L II K+
Sbjct: 131 NYGISASEWLFESNVKEISFVLKNFGEERFSRKIAYAIKRRSQIKKITSTLELANIIKKT 190
Query: 410 IRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVK 469
I ++K+PA R+FQAIRIYINQEL+ + AL+ K L GRI +ISFHSLEDR+VK
Sbjct: 191 IPTKNKFKHPARRSFQAIRIYINQELEEIQKALESTLKILKPGGRISIISFHSLEDRLVK 250
Query: 470 NFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPK 505
F+ N+ I +PI E ++ L CK K
Sbjct: 251 KFMIKNSTKAIIPYGMPIT----EEQLNRLTTCKLK 282
>gi|359796565|ref|ZP_09299162.1| 16S rRNA m(4)C1402 methyltransferase [Achromobacter arsenitoxydans
SY8]
gi|359365528|gb|EHK67228.1| 16S rRNA m(4)C1402 methyltransferase [Achromobacter arsenitoxydans
SY8]
Length = 365
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 175/261 (67%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
+G+++D TFG+GGHS ++L RLGK+ RL+ DKD E++++ N + DSR +++H F
Sbjct: 44 SGVFVDGTFGRGGHSRELLGRLGKQARLVVFDKDPEAIAVANALAAQDSRVTVVHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L++ I K+DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELEQLGIGKVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLRTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ L L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARTLAAALDLLAPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPI-YNYLFEPKMKFLAR 501
RLP+ + + +P ++ L +
Sbjct: 284 HARLPLRESEMPQPVLRSLGK 304
>gi|114331670|ref|YP_747892.1| hypothetical protein Neut_1686 [Nitrosomonas eutropha C91]
gi|114308684|gb|ABI59927.1| protein of unknown function DUF34 [Nitrosomonas eutropha C91]
Length = 248
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L+++++ DYCPNGLQVEGR++I +V+GVTAS LI+ A+D++ADAI+VHHGYFW+GE++
Sbjct: 14 LDVQQFRDYCPNGLQVEGRASIQTLVSGVTASQVLIQAALDLHADAIIVHHGYFWRGEDT 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ GIK+ R+ LI + INLYAYHLPLD H LGNN L K L RF + NI G
Sbjct: 74 CLRGIKRHRIATLIKHDINLYAYHLPLDAHADLGNNTLLGKKLGIKEEGRFGEQNIAAYG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
F+K ++ +L ++ +G+KP++IG+ K I I WCTGAAQ +AI
Sbjct: 134 Y--------FQKPASLDELDGLLSSVLGRKPLIIGNPLKPIRRIAWCTGAAQGYFEEAIR 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV A+I+GEISE V+ +RESG A+ +AGHHATERY
Sbjct: 186 LGVDAFITGEISEQNVHTARESGTAFISAGHHATERY 222
>gi|333892999|ref|YP_004466874.1| NIF3 protein [Alteromonas sp. SN2]
gi|332993017|gb|AEF03072.1| NIF3 protein [Alteromonas sp. SN2]
Length = 253
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + DYCPNGLQVEG+ I +VTGVTAS LI A+ NADAI+VHHGYFWKGE+
Sbjct: 16 LRAHEISDYCPNGLQVEGKPEIQRVVTGVTASQALIDAAIAENADAIVVHHGYFWKGESQ 75
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+KKKR++ L+ + INLYAYHLPLD+HP+ GNN QLA +LN R S + G
Sbjct: 76 AITGMKKKRIQALLEHDINLYAYHLPLDVHPEFGNNRQLATLLNIDNVRALS--GVKPTG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ + F+ ++ DL + K+G+ + GD NK I + WCTG Q + A+
Sbjct: 134 VVM---QGEFESPMSQHDLQQLLADKLGRAVLAEGDDNKAIKTVAWCTGGGQGFIEQAVA 190
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
EGV A+I+GE+SE T++ +RE G+++FAAGHHATERY
Sbjct: 191 EGVDAFITGEVSEQTIHTAREMGISFFAAGHHATERY 227
>gi|116515077|ref|YP_802706.1| S-adenosyl-dependent methyl transferase [Buchnera aphidicola BCc]
gi|122285527|sp|Q057T6.1|RSMH_BUCCC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116256931|gb|ABJ90613.1| S-adenosyl-dependent methyl transferase [Buchnera aphidicola BCc]
Length = 307
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 181/262 (69%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E IN LNI+ NGIYID TFG GGH+ +IL+ LG+ G+L +ID+D +SV+ G K
Sbjct: 6 VLLKETINALNIKK---NGIYIDGTFGNGGHTKEILKYLGQSGKLYSIDQDIKSVNKGKK 62
Query: 287 ITDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSII F++ + I KK KKIDGIL DLGISSNQIN RGFSF+ +G LDM
Sbjct: 63 IKDKRFSIIFGKFSKKIPYIYKKNKKKKIDGILLDLGISSNQINQNDRGFSFMKNGLLDM 122
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RM+ T GI A KWL +++ I+KV++ YGEER++KKI+ I + IT+T LV+I
Sbjct: 123 RMNNTTGIPAWKWLKKSSQKEIEKVLRKYGEERYSKKISYAIYNRNKKKTITQTLDLVQI 182
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I K+I +YK+PATRTFQAIRI+IN E+K L LKI K L K R+V+I FHSLE+
Sbjct: 183 IKKAIPKIDKYKHPATRTFQAIRIHINNEIKELKKTLKISIKILKKKRRLVIICFHSLEN 242
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
RIVKNF + K I R LPI
Sbjct: 243 RIVKNFFKKHGKTFFIPRGLPI 264
>gi|334144438|ref|YP_004537594.1| Ribosomal RNA small subunit methyltransferase H
[Thioalkalimicrobium cyclicum ALM1]
gi|333965349|gb|AEG32115.1| Ribosomal RNA small subunit methyltransferase H
[Thioalkalimicrobium cyclicum ALM1]
Length = 309
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 174/278 (62%), Gaps = 5/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN- 285
+ L E++ L I++ +G YID TFG+GGHS IL +LG +GRL+A D+D E+V+
Sbjct: 10 VLLPESLAGLAIKS---DGFYIDGTFGRGGHSRAILAQLGPQGRLVAFDQDPEAVAYAKA 66
Query: 286 KITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
ITDSRF I++ F +L + ++ ++K+DGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 SITDSRFDIVYGSFADLHSVAEQAGWMEKVDGILLDLGVSSPQLDEAERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ G+SA WL E + +V++ +GEERFA KIA+ + H + TK L +
Sbjct: 127 MRMNPAAGLSAKDWLIAVEEAKLAQVLKHFGEERFAYKIARAVSHDAKAGLVNTTKDLAD 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ + + ++K+PATRTFQAIRI +N EL L L L GR+ VISFHSLE
Sbjct: 187 LVSRVVPKKDKHKHPATRTFQAIRIAVNGELDALKQVLDASLAVLAPGGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
DRIVK F+ +++ + LPI E ++K + +
Sbjct: 247 DRIVKQFMRDQSQVKDLFPDLPILVATSEARLKRIGKA 284
>gi|325925694|ref|ZP_08187072.1| S-adenosyl-methyltransferase MraW [Xanthomonas perforans 91-118]
gi|346723700|ref|YP_004850369.1| S-adenosyl-methyltransferase MraW [Xanthomonas axonopodis pv.
citrumelo F1]
gi|325543910|gb|EGD15315.1| S-adenosyl-methyltransferase MraW [Xanthomonas perforans 91-118]
gi|346648447|gb|AEO41071.1| S-adenosyl-methyltransferase MraW [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 347
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 160/259 (61%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEHSFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDNGQSAAQWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+E I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ASEREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIHINRELADLEAGLDAALDALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 272 NRRLPEAQP-FVPTLQLVS 289
>gi|53803411|ref|YP_114850.1| S-adenosyl-methyltransferase MraW [Methylococcus capsulatus str.
Bath]
gi|115311584|sp|Q604V0.1|RSMH_METCA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|53757172|gb|AAU91463.1| S-adenosyl-methyltransferase MraW [Methylococcus capsulatus str.
Bath]
Length = 301
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 165/254 (64%), Gaps = 7/254 (2%)
Query: 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI 287
L+E + L + R +GIY+D TFG+GGHS ILERLG +GRL+AID+D E+V+
Sbjct: 1 MLSEVLEMLAV---RPDGIYVDCTFGRGGHSRAILERLGPEGRLLAIDRDLEAVAAAGAT 57
Query: 288 ---TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D+RF I H F+++ + ++DGIL DLG+SS Q++N RGFSFL GPL
Sbjct: 58 GLSADARFGIEHGRFSDVGRFVGARGWTGRVDGILMDLGVSSPQLDNARRGFSFLRAGPL 117
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD T+ +A++WLA +E + +V++DYGEERFA +IA+ +V R PI T LV
Sbjct: 118 DMRMDPTQKTTAAEWLAEVSERELARVLRDYGEERFAGRIARAVVEERRRRPIVTTTDLV 177
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I +I ++K+PATRTFQAIRI +N EL L L + L GR+VVISFHSL
Sbjct: 178 RLIEAAIPFKDKFKHPATRTFQAIRIAVNDELGQLQQGLNEAVEVLAAGGRLVVISFHSL 237
Query: 464 EDRIVKNFINFNTK 477
EDRIVK F+ +
Sbjct: 238 EDRIVKRFMRDEAR 251
>gi|289810554|ref|ZP_06541183.1| S-adenosyl-methyltransferase MraW [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 231
Score = 230 bits (587), Expect = 2e-57, Method: Composition-based stats.
Identities = 113/218 (51%), Positives = 157/218 (72%), Gaps = 4/218 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N LNI R +GIYID TFG+GGHS IL +LG++GRL+AID+D +++++
Sbjct: 10 VLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQT 66
Query: 287 ITDSRFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D RFSIIH F+ L D + ++ KIDGIL DLG+SS Q+++ RGFSF+ DGPLDM
Sbjct: 67 INDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WL A E +I V++ +GEERFAK+IA IV P+TRTK+L E+
Sbjct: 127 RMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIAHAIVERNREQPMTRTKELAEV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALK 443
+ + ++K+PATRTFQA+RI++N EL+ + A K
Sbjct: 187 VAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQATK 224
>gi|33519608|ref|NP_878440.1| S-adenosyl-methyltransferase MraW [Candidatus Blochmannia
floridanus]
gi|42559456|sp|Q7VQJ5.1|RSMH_BLOFL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|33517271|emb|CAD83655.1| S-adenosyl methionine adenyltransferase; probably methyltransferase
[Candidatus Blochmannia floridanus]
Length = 321
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 194/301 (64%), Gaps = 21/301 (6%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EAIN LNI +GIYID TFG GGHS IL +L GRLIA+D+D +V++G
Sbjct: 9 VLLHEAINALNINP---SGIYIDGTFGLGGHSHYILSKLTSHGRLIAMDRDWSAVNIGEV 65
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+T D RFSIIH F+++ + N + I+GIL DLG+ +Q+ + RGFSF+ DGPL
Sbjct: 66 LTKQDGRFSIIHAPFSKMLRCIYNMNLVGLINGILLDLGVCESQLTDSSRGFSFMRDGPL 125
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD + G SA +W+A A++ +I+ V++ +GEE+ +KKIA+ IV R + PI RT L
Sbjct: 126 DMRMDNSVGQSAYEWIAKASQKDIEWVLRTFGEEKLSKKIARSIVLKREVYPIDRTSALS 185
Query: 404 EIILKSI-----RGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVI 458
EII ++ R N+R K+PATR+F AIRIYIN+EL + L+ FK L GR+VVI
Sbjct: 186 EIISDTVLYYNNRYNRR-KHPATRSFLAIRIYINEELVEIMKILQDVFKLLAPGGRLVVI 244
Query: 459 SFHSLEDRIVKNFIN-------FNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIK 511
SF+SLEDRIVK FIN + KIP +L ++ Y K K L + KP L IK
Sbjct: 245 SFNSLEDRIVKKFINQYSRVFAYPPKIPLTHTQL-LHKYSGTMKFKNLGKIKP-TVLEIK 302
Query: 512 K 512
K
Sbjct: 303 K 303
>gi|384426562|ref|YP_005635919.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
raphani 756C]
gi|341935662|gb|AEL05801.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
raphani 756C]
Length = 352
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEHTFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA+ WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAADWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R P+ RT QL ++I + +PAT
Sbjct: 152 ATDREIADVLWTYGEERQSRRIARAIVARRGEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLP 486
+RRLP
Sbjct: 272 NRRLP 276
>gi|78046379|ref|YP_362554.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|88909226|sp|Q3BXF9.1|RSMH_XANC5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|78034809|emb|CAJ22454.1| S-adenosyl-methyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 337
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 160/259 (61%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ D+R SI F
Sbjct: 25 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEHSFGGDARVSIHRGSFAG 84
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 85 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDNGQSAAQWLAQ 141
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+E I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 142 ASEREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 201
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 202 RSFQAIRIHINRELADLEAGLDAALDALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 261
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 262 NRRLPEAQP-FVPTLQLVS 279
>gi|21230192|ref|NP_636109.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|188993033|ref|YP_001905043.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
campestris str. B100]
gi|24212033|sp|Q8PCK7.1|RSMH_XANCP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263504525|sp|B0RVB2.1|RSMH_XANCB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|21111730|gb|AAM40033.1| cell division protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|167734793|emb|CAP53003.1| S-adenosyl-methyltransferase [Xanthomonas campestris pv.
campestris]
Length = 342
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 158/259 (61%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ D+R SI F
Sbjct: 25 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEHTFGGDARVSIHRGSFAG 84
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA+ WLA
Sbjct: 85 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAGWLAQ 141
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R P+ RT QL ++I + +PAT
Sbjct: 142 ATDREIADVLWTYGEERQSRRIARAIVARRGEQPLLRTAQLADLIASVMPRGDSKTHPAT 201
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 202 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 261
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 262 NRRLPEAQP-FVPTLQLVS 279
>gi|170695779|ref|ZP_02886921.1| protein of unknown function DUF34 [Burkholderia graminis C4D1M]
gi|170139384|gb|EDT07570.1| protein of unknown function DUF34 [Burkholderia graminis C4D1M]
Length = 248
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 141/213 (66%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR I + TGVTAS+ ++ A+D ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRKIGKLATGVTASVAFLEAALDWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ L+ N +NL+AYHLPLD HP+ GNNAQ+ + + RF +N++GW+
Sbjct: 78 RKYGRLKLLLANDLNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ I + +G+ P+V GD ++ + + WCTGAAQ + AIN G
Sbjct: 134 ----TFAMPITLAHFTAEIEQTLGRTPLVFGDPDRSLRRVAWCTGAAQGMFDAAINAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|381171112|ref|ZP_09880262.1| S-adenosyl-methyltransferase MraW [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390990605|ref|ZP_10260888.1| S-adenosyl-methyltransferase MraW [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372554697|emb|CCF67863.1| S-adenosyl-methyltransferase MraW [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|380688507|emb|CCG36749.1| S-adenosyl-methyltransferase MraW [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 352
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 154/245 (62%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEHSFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAEWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ASDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLP 486
+RRLP
Sbjct: 272 NRRLP 276
>gi|289209380|ref|YP_003461446.1| hypothetical protein TK90_2220 [Thioalkalivibrio sp. K90mix]
gi|288945011|gb|ADC72710.1| protein of unknown function DUF34 [Thioalkalivibrio sp. K90mix]
Length = 249
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 148/219 (67%), Gaps = 8/219 (3%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
++L +++ DYCPNGLQVEGR+ + IV+GVTASL L++ A+ AD ILVHHGYFWKGE
Sbjct: 13 EELQPERFRDYCPNGLQVEGRAQVRRIVSGVTASLALVEAAIADGADTILVHHGYFWKGE 72
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGW 625
+ G+K++RL +L+ + INL AYHLPLD HP+LGNN QLA L F+ ++ +G
Sbjct: 73 PEVVTGMKRERLRRLLEHDINLVAYHLPLDAHPELGNNTQLANRLGFAIEGVLREDGVGQ 132
Query: 626 IGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDA 685
G+ ++ DL HI+ +G++ + + + I + WCTG AQ+LL +A
Sbjct: 133 YGRP--------AAEVSGADLRDHISAVLGRECLWVPGGERPIRRLAWCTGGAQSLLMEA 184
Query: 686 INEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+GV AYISGEISE T + +RESGV YFAAGHHATERY
Sbjct: 185 AAQGVDAYISGEISEQTTHEARESGVHYFAAGHHATERY 223
>gi|88704092|ref|ZP_01101807.1| S-adenosyl-methyltransferase mraW [Congregibacter litoralis KT71]
gi|88701919|gb|EAQ99023.1| S-adenosyl-methyltransferase mraW [Congregibacter litoralis KT71]
Length = 308
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 177/278 (63%), Gaps = 5/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L G+Y+D TFG+GGHS +IL RL +GRL A DKD E+ +
Sbjct: 8 VLLHEAVDALVGSP---AGLYVDGTFGRGGHSREILRRLDNQGRLFACDKDEEAERDAEE 64
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ D RFS F L L++ + +DGIL DLG+SS Q++ RGFSF DGPLD
Sbjct: 65 LLAGDDRFSFARGSFAALPAFLEERGLGAVDGILLDLGVSSPQLDQAERGFSFQQDGPLD 124
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG SA+ W+A A E I V+++YGEER+A++IA IV RS P+TRT QL
Sbjct: 125 MRMDRSRGESAADWIAAAPEQEIIDVLREYGEERYARRIAAAIVKARSEKPLTRTAQLAS 184
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ ++ +++K+PATR+FQAIRI +N+EL +L+ L + L + GR+VVISFHSLE
Sbjct: 185 IVSEAHPRWEKHKHPATRSFQAIRIRVNRELDDLAELLSLALSVLAVGGRLVVISFHSLE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
DR+VK + ++ P + R LP+ + M+ L +
Sbjct: 245 DRLVKRHLRDMSRGPQLPRDLPVRDVDVGVPMRLLGKA 282
>gi|284007856|emb|CBA73758.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 247
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 148/218 (67%), Gaps = 11/218 (5%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
LNI +Y+DY PNGLQVEGRS + IVTGVTAS L+ AV + ADAI+VHHGYFWK E +
Sbjct: 14 LNINEYQDYAPNGLQVEGRSEVKKIVTGVTASQALLDEAVKLAADAIIVHHGYFWKNEAA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I+ +K+KRL+ L+ N INLY YHLPLD HP +GNNAQLAKI+ + + IG
Sbjct: 74 VILNMKRKRLKTLLCNDINLYGYHLPLDAHPIMGNNAQLAKIMEVEIESYITP--LLPIG 131
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLN-KKIYEIGWCTGAAQNLLTDAI 686
K F + IT DL + ++G++P+ GD KKIY I WCTG QN + A
Sbjct: 132 K--------FAQPITPDDLMTRLNERLGRQPLYCGDNGPKKIYTIAWCTGGGQNFIQQAA 183
Query: 687 NEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV A+++GE+SE T++I+RE G+ ++AAGHHATER+
Sbjct: 184 EAGVDAFVTGEVSEQTIHIAREMGIHFYAAGHHATERF 221
>gi|408374465|ref|ZP_11172152.1| hypothetical protein A11A3_10237 [Alcanivorax hongdengensis A-11-3]
gi|407765740|gb|EKF74190.1| hypothetical protein A11A3_10237 [Alcanivorax hongdengensis A-11-3]
Length = 251
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 507 KLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGEN 566
+L +++DYCPNGL VEGR I +V+GVTAS LI+ A+ +ADAILVHHGYFWKGE+
Sbjct: 14 ELQTDRFQDYCPNGLHVEGREQIRRVVSGVTASQALIEAALVEDADAILVHHGYFWKGED 73
Query: 567 SNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF--SKNNIG 624
+ G+KK+RL+ L+ + +N++AYHLPLD HP LGNNAQLA+ L S + IG
Sbjct: 74 PRVAGMKKQRLQTLLRHDLNVFAYHLPLDAHPTLGNNAQLARRLGLSVEGGLDDAPRPIG 133
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
IG++ ++ + H+ +G+ P+ +GD +I IGWCTGAAQ +
Sbjct: 134 NIGRL--------DSPMSAAEFAAHVEAVLGRTPVHVGDPGDEIETIGWCTGAAQGFIEK 185
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
A GV AY+SGEISE T +++RE+G+ YFA GHHATERY
Sbjct: 186 AQRLGVDAYLSGEISEPTAHVARETGMHYFACGHHATERY 225
>gi|400405326|ref|YP_006588185.1| S-adenosyl-methyltransferase MraW [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400363689|gb|AFP84757.1| S-adenosyl-methyltransferase MraW [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 323
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 177/262 (67%), Gaps = 4/262 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNEA+ LNI +G+Y+DATFG+GGHS IL +L +G+L A+D+D +++
Sbjct: 10 VLLNEAVQGLNIHP---DGVYLDATFGRGGHSRLILSKLNSEGKLFAVDRDIAAIAAARS 66
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D+RF+IIH F+ + +K+ N+ +++GIL DLG+SS Q+ + RGFSF+ DGPLDM
Sbjct: 67 INDTRFTIIHGPFSAIADYMKERNLLGQVNGILLDLGVSSPQLEDPERGFSFMRDGPLDM 126
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD TRG SA++WLA A++ +I V++ +GEERFAK+IA+ I IT T++L +
Sbjct: 127 RMDTTRGQSAAQWLAKASKEDIAGVLRTFGEERFAKRIAQAIETRNLQKKITHTRELAAV 186
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I + ++K+ ATR+FQAIR+YIN EL+ + AL L GR+ VISFHSLED
Sbjct: 187 ISDASPFPDKHKHSATRSFQAIRMYINNELEEIKRALDSALTVLAPCGRLSVISFHSLED 246
Query: 466 RIVKNFINFNTKIPHIDRRLPI 487
R+VK FI +++ P + LP+
Sbjct: 247 RLVKYFIRRHSRRPQVPVGLPL 268
>gi|386288570|ref|ZP_10065710.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium BDW918]
gi|385278125|gb|EIF42097.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium BDW918]
Length = 313
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 176/279 (63%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + +G Y+D TFG+GGHS +ILE L +GRL+ IDKD ++ S G +
Sbjct: 7 VLLEEAVAALVTDT---SGRYVDGTFGRGGHSRQILESLSAEGRLLGIDKDAQAFSEGLE 63
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIKK-IDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I F + + + G+L DLG+SS Q++ RGFSF+ DG L
Sbjct: 64 LAQADQRFRIARGSFADFAELAASSGMAAPFTGVLLDLGVSSPQLDQAERGFSFMRDGDL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD+ RG+SA++W+A A E I KV++DYGEERFAK+IA+ I+ R PITRT QL
Sbjct: 124 DMRMDVDRGMSAAQWIAVADEAEITKVLRDYGEERFAKRIARAIIAAREEEPITRTLQLA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I+ ++ +++K+PATR+FQAIRI+IN EL +L L L++ GR+VVISFHSL
Sbjct: 184 KIVTEANPAWEKHKHPATRSFQAIRIFINDELTDLEKLLSKVVDSLDVGGRLVVISFHSL 243
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK F+ + + +P+ K+K + +
Sbjct: 244 EDRIVKRFMRRQAEGEQVPAYIPVTESQRNRKLKLIGKA 282
>gi|66769818|ref|YP_244580.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
campestris str. 8004]
gi|81304228|sp|Q4UQW3.1|RSMH_XANC8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|66575150|gb|AAY50560.1| cell division protein [Xanthomonas campestris pv. campestris str.
8004]
Length = 342
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/259 (45%), Positives = 158/259 (61%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E+V++ D+R SI F
Sbjct: 25 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAVAVSQHTFGGDARVSIHPGSFAR 84
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ +DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA+ WLA
Sbjct: 85 L---VQVVAAATVDGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAGWLAQ 141
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
AT+ I V+ YGEER +++IA+ IV R P+ RT QL ++I + +PAT
Sbjct: 142 ATDREIADVLWTYGEERQSRRIARAIVARRGEQPLLRTAQLADLIASVMPRGDSKTHPAT 201
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 202 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 261
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 262 NRRLPEAQP-FVPTLQLVS 279
>gi|21241542|ref|NP_641124.1| S-adenosyl-methyltransferase MraW [Xanthomonas axonopodis pv. citri
str. 306]
gi|418515276|ref|ZP_13081457.1| 16S rRNA m(4)C1402 methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418521031|ref|ZP_13087077.1| 16S rRNA m(4)C1402 methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|24212036|sp|Q8PPB5.1|RSMH_XANAC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|21106893|gb|AAM35660.1| cell division protein [Xanthomonas axonopodis pv. citri str. 306]
gi|410703007|gb|EKQ61504.1| 16S rRNA m(4)C1402 methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410707995|gb|EKQ66444.1| 16S rRNA m(4)C1402 methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 342
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 154/245 (62%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ D+R SI F
Sbjct: 25 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEHSFGGDARVSIHRGSFAG 84
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 85 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAEWLAQ 141
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 142 ASDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 201
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 202 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 261
Query: 482 DRRLP 486
+RRLP
Sbjct: 262 NRRLP 266
>gi|451823284|ref|YP_007459558.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451776084|gb|AGF47125.1| S-adenosyl-methyltransferase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 327
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
NGI++D TFG+GGH+ ++L L + DKD E++ + N + D+R ++IHN F
Sbjct: 41 NGIFVDGTFGRGGHTKELLSFLDSDSMVFVFDKDPEAIVVANDLAKQDNRVNVIHNSFAC 100
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L N+ +DGI+ DLGISS QI RGFSF+ DGPLDMRMD T+GI+ S W+
Sbjct: 101 IKEELYSRNVNYVDGIMLDLGISSPQIERGERGFSFMRDGPLDMRMDNTKGITVSDWIQK 160
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ IK V+ +YGEERFA +IAK I+ YR P T T +L E I K+I ++ K+PAT
Sbjct: 161 ASLNEIKDVLSNYGEERFALQIAKAIIAYRDKKPFTSTFELSECISKAIPIREKCKHPAT 220
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQA+RI+IN EL +LS LK LN G + VISFHSLEDRIVK IN + ++
Sbjct: 221 RSFQALRIHINNELLDLSKCLKSSIDLLNPAGVLSVISFHSLEDRIVKKSINSDLLKQNV 280
Query: 482 DRRLPIY-NYLFEPKMKFLARCKPKKK 507
LPIY + EP M+ + R P K+
Sbjct: 281 YIDLPIYAKDIPEPSMRSVLRIFPSKE 307
>gi|421485319|ref|ZP_15932878.1| 16S rRNA m(4)C1402 methyltransferase [Achromobacter piechaudii HLE]
gi|400196238|gb|EJO29215.1| 16S rRNA m(4)C1402 methyltransferase [Achromobacter piechaudii HLE]
Length = 365
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 172/261 (65%), Gaps = 3/261 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTE 301
G+++D TFG+GGHS ++L RLGK RL+ DKD E++++ N + D R ++IH F
Sbjct: 44 RGVFVDGTFGRGGHSRELLGRLGKDARLVVFDKDPEAIAVANALAAADPRVTVIHGGFAT 103
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L++ I K+DG++ DLG+SS QI++ RGFSF+ DGPLDMRMD TRG + + WLA
Sbjct: 104 MAEELEQRGIGKVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ 163
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A+ +++VI DYGEERFA ++AK I R+ P+ T +L E + ++R ++ ++PAT
Sbjct: 164 ASVDEMREVIADYGEERFAFQVAKAIAARRATRPLRTTLELAECVASAVRTREKGQHPAT 223
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQA+RIYIN+EL+ L+ L L GR+ VISFHSLEDR+VK I +
Sbjct: 224 RTFQALRIYINRELEELARTLAAALDLLAPGGRLAVISFHSLEDRMVKQCIAAAARPAAA 283
Query: 482 DRRLPIY-NYLFEPKMKFLAR 501
RLP+ + + +P ++ L R
Sbjct: 284 HARLPLRESEMPQPILRSLGR 304
>gi|241664443|ref|YP_002982803.1| hypothetical protein Rpic12D_2861 [Ralstonia pickettii 12D]
gi|240866470|gb|ACS64131.1| protein of unknown function DUF34 [Ralstonia pickettii 12D]
Length = 248
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 144/216 (66%), Gaps = 8/216 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQV+GR ++ IVTGVTASL LI+ AV ADAILVHHGYFWKGE+
Sbjct: 14 LQAARFRDYCPNGLQVQGRESVAHIVTGVTASLALIEAAVAARADAILVHHGYFWKGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+VG K RL+QL+ + +NL+AYHLPLD HP LGNNAQL +L S RF + +GWIG
Sbjct: 74 RVVGQKHARLKQLLTHDLNLFAYHLPLDAHPDLGNNAQLGALLGISPQGRFGDDELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ T++ ++ ++ + P+VIG+ + + +GWCTG AQ A+
Sbjct: 134 AL--------AAPTTLRAFAQTVSARLNRVPLVIGEEDCPVRTVGWCTGGAQGWFDAAVA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
GV Y+SGE SE T +++RESGVAY AGHHATER
Sbjct: 186 AGVDVYLSGEASEQTTHLARESGVAYIGAGHHATER 221
>gi|406978840|gb|EKE00725.1| hypothetical protein ACD_21C00285G0019 [uncultured bacterium]
Length = 328
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 174/277 (62%), Gaps = 5/277 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EAI LNI R +G+Y+DATFG+GGHS +IL L G L+ IDKD E++ +
Sbjct: 30 VLLEEAIAGLNI---RKDGVYVDATFGRGGHSREILRHLDDSGSLLCIDKDLEAIQKAQQ 86
Query: 287 ITDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D R I F ++ + + K++GIL DLG+SS Q+++ RGFSFL DGPLDM
Sbjct: 87 IGDKRLIIRQGSFAKIKTWIDELGYSGKVNGILLDLGVSSPQLDSAQRGFSFLRDGPLDM 146
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RMD + + A+KWL A E I +V+++YGEERF+++IA IV R+I PI T +L EI
Sbjct: 147 RMDQEQLLDAAKWLNRAKENEIAQVLKEYGEERFSRRIAHAIVVERAIAPIVTTGRLAEI 206
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
+ K+ + +K+PATR FQAIRI+IN EL+ L L L + GR+ VISFHSLED
Sbjct: 207 VKKANPKWEEHKHPATRAFQAIRIFINDELQELHDCLGQCLDVLAVGGRLAVISFHSLED 266
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
RI K F+ + + H+ +P+ + ++K + +
Sbjct: 267 RIAKQFMQKHM-MGHVPEGVPLRDIQLPKRLKRIGKA 302
>gi|220933941|ref|YP_002512840.1| S-adenosyl-methyltransferase MraW [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|262825935|sp|B8GMM1.1|RSMH_THISH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|219995251|gb|ACL71853.1| S-adenosyl-methyltransferase MraW [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 314
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 171/266 (64%), Gaps = 6/266 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L + R +GIY+D TFG+GGHS +ILERLG GRLIA+D+D E+ + +
Sbjct: 12 VLLEEAVEALAV---RPDGIYLDGTFGRGGHSGRILERLGPDGRLIALDRDPEAEAEAAR 68
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF F L + + I ++DG+L DLG+SS Q++ RGFSF+ DGPL
Sbjct: 69 RFGDDERFHFERCSFEMLQQVTDRLGISGRLDGVLLDLGVSSPQLDTPERGFSFMSDGPL 128
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD G SA+ WLA A E I V+++YGEERFA++IA+ IV R P+ RT+QL
Sbjct: 129 DMRMDPESGESAAAWLARANEDEIAWVLKEYGEERFARRIARRIVETRQEMPLERTRQLA 188
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E+I +++ +R+K+PATR+FQAIRI +N EL+ L L+ L GR+ VISFHSL
Sbjct: 189 ELIAEAVPFKERHKHPATRSFQAIRIRVNDELETLPRCLEQIPALLAPGGRLAVISFHSL 248
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYN 489
EDR+VK F+ + + R LP+
Sbjct: 249 EDRMVKRFLRDQAEGERLPRGLPVQG 274
>gi|78484904|ref|YP_390829.1| methyltransferase [Thiomicrospira crunogena XCL-2]
gi|123555855|sp|Q31I68.1|RSMH_THICR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|78363190|gb|ABB41155.1| S-adenosyl-methyltransferase MraW [Thiomicrospira crunogena XCL-2]
Length = 314
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 172/277 (62%), Gaps = 5/277 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN- 285
+ L+E++ LNI+ NGIYID TFG+GGHS IL LG++GRL+AID+D E++ +
Sbjct: 15 VMLSESVAGLNIDP---NGIYIDCTFGRGGHSRAILNELGEQGRLLAIDQDPEAIRYADA 71
Query: 286 KITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
D RF I H F L + + + KIDGIL DLG+SS Q++ RGFSF+ GPLD
Sbjct: 72 NFDDPRFEIQHGSFEALQQYCEARDWVGKIDGILIDLGVSSPQLDEAERGFSFMRSGPLD 131
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ G+SA +WL E + +V++ YGEERF+ +IA+ I + T L +
Sbjct: 132 MRMNPQTGLSAKEWLTQVDEKTLAQVLKQYGEERFSGRIARHIKEAVQEQKLQTTLDLAQ 191
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ K+ +++K+PATRTFQAIRI +N+EL L L++ L GR+ VISFHSLE
Sbjct: 192 VVTKASPKTEKHKHPATRTFQAIRIAVNRELDVLKTVLEVSVAVLKTGGRLSVISFHSLE 251
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR 501
DRIVK FI ++I + PI + EP +K + +
Sbjct: 252 DRIVKQFIRDQSRIKDLFPDSPIQLEVVEPVIKKVGK 288
>gi|300112935|ref|YP_003759510.1| S-adenosyl-methyltransferase MraW [Nitrosococcus watsonii C-113]
gi|299538872|gb|ADJ27189.1| S-adenosyl-methyltransferase MraW [Nitrosococcus watsonii C-113]
Length = 318
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 177/270 (65%), Gaps = 6/270 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E I L I R +GIYID TFG+GGH+ IL L +GRL+ +DKD +++ G+
Sbjct: 15 VLLREVIQALAI---RRDGIYIDGTFGRGGHAQAILAALSSEGRLLGVDKDPAAIAAGHA 71
Query: 287 IT--DSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF+I+ +L ++ + ++KI+G LFDLG+SS Q+ N RGFSFL DGPL
Sbjct: 72 LAQKDGRFTIVQASIGDLARVVSERGWLRKINGALFDLGVSSPQLENAERGFSFLQDGPL 131
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G SA++WLANA E I +V++ YGEER+ ++IA+ I+ R + +TRTKQL
Sbjct: 132 DMRMNPAVGQSAAEWLANAKEKEIAEVLRVYGEERYCRRIARAIIQARGLNSLTRTKQLA 191
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ K+I +R +PATR+FQAIRI+IN EL+ L AL+ L +KGR+ VISFHSL
Sbjct: 192 EVVAKAIPRWERRIHPATRSFQAIRIFINHELEELRAALEQALAALAVKGRLAVISFHSL 251
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
EDRIVK F + + LP+ F+
Sbjct: 252 EDRIVKRFFREKARGEDLPLDLPVMQEDFQ 281
>gi|110833427|ref|YP_692286.1| hypothetical protein ABO_0566 [Alcanivorax borkumensis SK2]
gi|110646538|emb|CAL16014.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 264
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 147/222 (66%), Gaps = 10/222 (4%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
++L + ++DYCPNGLQVEGR I+ +V+GVTA LI A+ ADAILVHHGYFWKG
Sbjct: 25 DQELAVDCFQDYCPNGLQVEGREQIHRVVSGVTACQALIDAAIVEEADAILVHHGYFWKG 84
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF--SKNN 622
E+ I G+KK+RL+ L+ + IN++AYHLPLD HP LGNNAQLA+ L + S
Sbjct: 85 ESQQIRGMKKQRLQTLLRHDINVFAYHLPLDAHPTLGNNAQLARRLGLTTEGGLDDSPRP 144
Query: 623 IGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLL 682
IG +G++ ++ + H+ +G+ P+ IGD +I IGWCTG AQ +
Sbjct: 145 IGNVGRL--------DSPMSASEFAAHVEAVLGRTPLHIGDPGDEIETIGWCTGGAQGFI 196
Query: 683 TDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
A ++GV AY+SGEISE T + +RE+G+ YFA GHHATERY
Sbjct: 197 EKAQSKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERY 238
>gi|377555605|ref|ZP_09785333.1| 16S rRNA m(4)C1402 methyltranserfase [endosymbiont of Bathymodiolus
sp.]
Length = 312
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 173/269 (64%), Gaps = 6/269 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ +E+I L + + NGIY+DATFG+GGH+ IL++LG + +LIA D+D ++ ++
Sbjct: 9 VMFDESIKGLKL---KTNGIYVDATFGRGGHALGILDKLGDQAKLIAFDQDITAIEYADQ 65
Query: 287 -ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
DSR +IH+ F + IL + + KIDGI DLG+SS Q++N RGFSF +GPLD
Sbjct: 66 QFNDSRLRLIHSPFVNMHQILSEEGLLGKIDGIFMDLGVSSPQLDNAERGFSFNAEGPLD 125
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ + GIS ++WL +A E I VI ++GEER ++ IA I ++ PI T QL
Sbjct: 126 MRMNQSSGISVAQWLVSADEVEIANVIYEFGEERKSRHIASAIKRFQQQQPIETTLQLAN 185
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ S+ K+ K+PATRTFQA+RI+INQEL LS LK L + R+ VISFHS+E
Sbjct: 186 IV-ASVVKTKKNKHPATRTFQAMRIFINQELTQLSETLKHTIHLLAPEARLCVISFHSIE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
DRIVK FI ++K + + LPI + E
Sbjct: 245 DRIVKQFIQQHSKQKQLPKGLPIMDSGVE 273
>gi|379009796|ref|YP_005267609.1| S-adenosyl-dependent methyltransferase [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|375158320|gb|AFA41386.1| S-adenosyl-dependent methyltransferase [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 307
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 177/271 (65%), Gaps = 5/271 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE I+ +NI +G YIDATFG GGH+ KIL +L +G++I ID+D ++ + +
Sbjct: 5 VMLNEVIHVINIIP---SGTYIDATFGGGGHTKKILSKLNSQGQIIVIDRDPLAIKIASN 61
Query: 287 ITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
+ D R +IH F+ + KKYN I K++GILFD GISS QI+++ RGFSFL DGPLDM
Sbjct: 62 LQDPRIKVIHGNFSSITQYAKKYNLIGKVNGILFDFGISSFQIDDKNRGFSFLQDGPLDM 121
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RM+ GISA+ W+ A I V++++GEER+AKKIA+ I+ + IT+T +L I
Sbjct: 122 RMNNMHGISAADWINRAKLSEIYFVLKNFGEERYAKKIAQAIIENKKRKLITKTSELSSI 181
Query: 406 ILKSIR-GNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I + ++ K+PA R+FQAIRI+IN ELK + LK L GRIV ISFHSLE
Sbjct: 182 ICNTCGIYYQKNKHPARRSFQAIRIHINNELKEIKETLKQILTLLKENGRIVFISFHSLE 241
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPK 495
DRI+KNFIN+N+KI LPI + K
Sbjct: 242 DRIIKNFINYNSKIQIHPHNLPILESQIQKK 272
>gi|90407819|ref|ZP_01215996.1| hypothetical protein PCNPT3_07033 [Psychromonas sp. CNPT3]
gi|90311084|gb|EAS39192.1| hypothetical protein PCNPT3_07033 [Psychromonas sp. CNPT3]
Length = 267
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 151/220 (68%), Gaps = 11/220 (5%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L I +++DYCPNGLQ+EG+ + I+ GVTA+ LI AV ADAILVHHG+FW+GE+
Sbjct: 30 LEIHQFKDYCPNGLQIEGKEEVQKIILGVTANQALIDIAVAQKADAILVHHGFFWRGESE 89
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTR---RFSKNNIG 624
NIVG+K KR++ LI N INLYAYHLPLD+H +LGNN QLAK+L + R ++K ++G
Sbjct: 90 NIVGMKYKRIKALIENGINLYAYHLPLDVHSELGNNTQLAKLLGITDRRPLEPWNKRSVG 149
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
+GK F + +T L I R + + P+ I +I + WCTG Q+L+T
Sbjct: 150 RVGK--------FSEALTGDQLSARIERALQRSPLHIDGGKSEIKTVAWCTGGGQDLITI 201
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
A +G+ A+ISGEISE TV+I+RE G+ Y+AAGHHATERY
Sbjct: 202 AAEQGIDAFISGEISERTVHIAREMGIHYYAAGHHATERY 241
>gi|171316497|ref|ZP_02905714.1| protein of unknown function DUF34 [Burkholderia ambifaria MEX-5]
gi|171098331|gb|EDT43136.1| protein of unknown function DUF34 [Burkholderia ambifaria MEX-5]
Length = 248
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 144/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+LGNNAQL + L +RF ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIGEQRFGDGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDADMQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SES + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERY 222
>gi|409394176|ref|ZP_11245405.1| hypothetical protein C211_02895 [Pseudomonas sp. Chol1]
gi|409121233|gb|EKM97371.1| hypothetical protein C211_02895 [Pseudomonas sp. Chol1]
Length = 252
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 156/227 (68%), Gaps = 8/227 (3%)
Query: 498 FLARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVH 557
+A C + LN+ K DYCPNGLQVEGR+ + IV+GVTAS L+ AV+ AD +LVH
Sbjct: 8 LVAECD--RYLNVAKIADYCPNGLQVEGRAQVRRIVSGVTASQALLDAAVEAQADVVLVH 65
Query: 558 HGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRR 617
HGYFWK E++ IVG+K++RL+ L+ + I+L AYHLPLD+HP++GNN QLA++L+
Sbjct: 66 HGYFWKNEDARIVGMKQRRLKTLLNHDISLLAYHLPLDVHPEVGNNPQLARVLDLRVEGA 125
Query: 618 FSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGA 677
+N +G + +L + ++ + + + +G++P++I D + I I WCTG
Sbjct: 126 LEPDNPKSVGLVGSL-----RAPMSPVEFQRQVHQALGREPLLI-DGRRPIQRIAWCTGG 179
Query: 678 AQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AQ + A+ GV AY++GEISE TV+I+RE+G+++FAAGHHATERY
Sbjct: 180 AQGYIEQAVAAGVDAYLTGEISEPTVHIARENGLSFFAAGHHATERY 226
>gi|115350413|ref|YP_772252.1| hypothetical protein Bamb_0358 [Burkholderia ambifaria AMMD]
gi|172059432|ref|YP_001807084.1| hypothetical protein BamMC406_0367 [Burkholderia ambifaria MC40-6]
gi|115280401|gb|ABI85918.1| protein of unknown function DUF34 [Burkholderia ambifaria AMMD]
gi|171991949|gb|ACB62868.1| protein of unknown function DUF34 [Burkholderia ambifaria MC40-6]
Length = 248
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 144/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+LGNNAQL + L +RF ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIGDQRFGDGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDADMQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SES + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSESVTHAAAESGVAFVAAGHHATERY 222
>gi|413959470|ref|ZP_11398706.1| hypothetical protein BURK_006112 [Burkholderia sp. SJ98]
gi|413940427|gb|EKS72390.1| hypothetical protein BURK_006112 [Burkholderia sp. SJ98]
Length = 248
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 140/216 (64%), Gaps = 10/216 (4%)
Query: 510 IKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI 569
I +++DYCPNGLQVEG + I TGVTAS ++ A++ AD +LVHHGYFW+ E I
Sbjct: 16 IGRFKDYCPNGLQVEGARRVQKIATGVTASQAFLEAALEWGADTVLVHHGYFWRNEAPQI 75
Query: 570 VGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKI 629
G K +RL LI N INL+AYHLPLD HP+LGNNAQ+ L RF+ ++GWI +
Sbjct: 76 TGRKHRRLRTLIANDINLFAYHLPLDSHPELGNNAQIGARLGLIADARFANQDLGWIATL 135
Query: 630 -INLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINE 688
+ L +F + + +G+KP+V GD +K++ + WCTG AQ +AI
Sbjct: 136 GMPLPLEHFSAM---------VENALGRKPLVFGDTDKELRRVAWCTGGAQGYFEEAIAA 186
Query: 689 GVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGE+SE T++I+ ESGVAY AAGHHATERY
Sbjct: 187 GADVYLSGEVSEQTMHIAAESGVAYIAAGHHATERY 222
>gi|386717076|ref|YP_006183402.1| rRNA small subunit methyltransferase H [Stenotrophomonas
maltophilia D457]
gi|384076638|emb|CCH11221.1| rRNA small subunit methyltransferase H [Stenotrophomonas
maltophilia D457]
Length = 322
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWDATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
E I V+ YGEER +++IA+ IV R P +RT +L E+I + K +PAT
Sbjct: 154 VEEREIADVLWTYGEERQSRRIARAIVARREKQPFSRTAELAELIASVMPRGKDKIHPAT 213
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L ++L GR+ VISFHSLEDRIVK ++N K P
Sbjct: 214 RSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAVISFHSLEDRIVKQYMNRLAKAPPA 273
Query: 482 DRRLP 486
+RRLP
Sbjct: 274 NRRLP 278
>gi|408822338|ref|ZP_11207228.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas geniculata N1]
Length = 322
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/253 (45%), Positives = 161/253 (63%), Gaps = 6/253 (2%)
Query: 238 IENERI--NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFS 293
IE R+ NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R S
Sbjct: 28 IEGLRVIENGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVS 87
Query: 294 IIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGI 353
I F +L + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G
Sbjct: 88 IFRGSFAQL--LQWDATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGE 145
Query: 354 SASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGN 413
SA++W+ + I V+ YGEER +++IA+ IV R P TRT +L E+I +
Sbjct: 146 SAAQWINRVEDREIADVLWTYGEERQSRRIARAIVARREKQPFTRTAELAELIASVMPRG 205
Query: 414 KRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 473
K +PATR+FQAIRI+IN+EL +L L ++L GR+ VISFHSLEDRIVK ++N
Sbjct: 206 KDKIHPATRSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAVISFHSLEDRIVKQYMN 265
Query: 474 FNTKIPHIDRRLP 486
K P +RRLP
Sbjct: 266 RLAKAPPANRRLP 278
>gi|294627718|ref|ZP_06706300.1| S-adenosyl-methyltransferase MraW [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598070|gb|EFF42225.1| S-adenosyl-methyltransferase MraW [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 347
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 154/245 (62%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD +++++ D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPDAIAVAEHSFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAEWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ASDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLP 486
+RRLP
Sbjct: 272 NRRLP 276
>gi|456737946|gb|EMF62623.1| rRNA small subunit methyltransferase H [Stenotrophomonas
maltophilia EPM1]
Length = 322
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWDATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
E I V+ YGEER +++IA+ IV R P +RT +L E+I + K +PAT
Sbjct: 154 VEEREIADVLWTYGEERQSRRIARAIVARREKQPFSRTAELAELIASVMPRGKDKIHPAT 213
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L ++L GR+ VISFHSLEDRIVK ++N K P
Sbjct: 214 RSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAVISFHSLEDRIVKQYMNRLAKAPPT 273
Query: 482 DRRLP 486
+RRLP
Sbjct: 274 NRRLP 278
>gi|336451755|ref|ZP_08622192.1| S-adenosyl-methyltransferase MraW [Idiomarina sp. A28L]
gi|336281568|gb|EGN74848.1| S-adenosyl-methyltransferase MraW [Idiomarina sp. A28L]
Length = 317
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 169/269 (62%), Gaps = 5/269 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+I+ L I+ ++I YIDATFG+GGHS IL++LG G+LIA D+D +
Sbjct: 10 VLLTESISALAIQPDQI---YIDATFGRGGHSRAILQQLGPAGKLIAFDRDPTAAKAAEA 66
Query: 287 ITDS-RFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
++D RF H F++L I+ + ++ GILFDLG+SS Q+++ RGFSF+ DGPLD
Sbjct: 67 LSDDPRFQFFHTPFSKLAEIISAQQLNGRVAGILFDLGVSSPQLDDADRGFSFMRDGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G SA+ WLA+A ++ V + YGEE++A +IA+ I+ YR TRT +L
Sbjct: 127 MRMDPSVGESAADWLAHADMDSLCYVFRTYGEEKYAARIARAIIEYRQDNQFTRTSELAN 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I K ++ K+PATR FQAIRI++N+EL + AL L GR+ VISFHSLE
Sbjct: 187 LIAKVNPSREKQKHPATRVFQAIRIHVNRELDEVREALVAALDALMPGGRLAVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFE 493
DRI K FI ++ + LP+ + E
Sbjct: 247 DRIAKQFIREQSRRAQVPAGLPLRDDQIE 275
>gi|190572794|ref|YP_001970639.1| S-adenosyl-methyltransferase MraW [Stenotrophomonas maltophilia
K279a]
gi|262826755|sp|B2FNN0.1|RSMH_STRMK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|190010716|emb|CAQ44325.1| putative S-adenosyl-methyltransferase mraW [Stenotrophomonas
maltophilia K279a]
Length = 322
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWDATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
E I V+ YGEER +++IA+ IV R P +RT +L E+I + K +PAT
Sbjct: 154 VEEREIADVLWTYGEERQSRRIARAIVARREKQPFSRTAELAELIASVMPRGKDKIHPAT 213
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L ++L GR+ VISFHSLEDRIVK ++N K P
Sbjct: 214 RSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAVISFHSLEDRIVKQYMNRLAKAPPA 273
Query: 482 DRRLP 486
+RRLP
Sbjct: 274 NRRLP 278
>gi|407714893|ref|YP_006835458.1| hypothetical protein BUPH_06274 [Burkholderia phenoliruptrix
BR3459a]
gi|407237077|gb|AFT87276.1| hypothetical protein BUPH_06274 [Burkholderia phenoliruptrix
BR3459a]
Length = 248
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 141/213 (66%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR + + TGVTAS+ ++ A++ ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRKVGKLATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ L+ N +NL+AYHLPLD HP+ GNNAQ+ + + RF +N++GW+
Sbjct: 78 RKYARLKLLLANDLNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ I + +G+ P+V GD ++ + + WCTGAAQ + AIN G
Sbjct: 134 ----TFAMPITLAHFTAEIEQTLGRTPLVFGDPDRMLRRVAWCTGAAQGMFDAAINAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|294664073|ref|ZP_06729474.1| S-adenosyl-methyltransferase MraW [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292606158|gb|EFF49408.1| S-adenosyl-methyltransferase MraW [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 347
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 154/245 (62%), Gaps = 5/245 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD +++++ D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPDAIAVAEHSFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAEWLAQ 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ASDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIHINRELADLEAGLDAALGALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLP 486
+RRLP
Sbjct: 272 NRRLP 276
>gi|308048060|ref|YP_003911626.1| S-adenosyl-methyltransferase MraW [Ferrimonas balearica DSM 9799]
gi|307630250|gb|ADN74552.1| S-adenosyl-methyltransferase MraW [Ferrimonas balearica DSM 9799]
Length = 315
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 184/283 (65%), Gaps = 13/283 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA+N L + + +GIY+D TFG+GGHS IL +LG GRLI ID+D ++V++ +
Sbjct: 10 VLLDEAVNGLQL---KPDGIYVDGTFGRGGHSRHILSQLGPNGRLIGIDRDPQAVAVAQQ 66
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF I+H F+ + ++ + +IDG+L DLG+SS Q+++ RGFSFL DGPL
Sbjct: 67 LAAEDPRFQIVHGPFSGIAEYVEALGLTGQIDGVLLDLGVSSPQLDDAERGFSFLRDGPL 126
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIV-HYRSITPITRTKQL 402
DMRMD +RG +A++WLA A +I V++ +GEE+FA+ IA++IV H + P+ RT L
Sbjct: 127 DMRMDNSRGETAAEWLARAEANDIAWVLKTFGEEKFARPIARKIVEHIAAGEPMDRTSHL 186
Query: 403 VEIILKSIRGNKRY--KNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISF 460
+I K +KR K+PATR+FQAIRIYIN EL+ + AL + L GR+ VISF
Sbjct: 187 AGLIEKMTPKHKRDQGKHPATRSFQAIRIYINSELEEIEKALMGALEALKPGGRLSVISF 246
Query: 461 HSLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCK 503
HSLEDR+VK F+ ++ + LP L E +MK R K
Sbjct: 247 HSLEDRLVKRFMRRESQGEPVPHGLP----LTEEQMKQTRRLK 285
>gi|107024211|ref|YP_622538.1| hypothetical protein Bcen_2667 [Burkholderia cenocepacia AU 1054]
gi|116688464|ref|YP_834087.1| hypothetical protein Bcen2424_0440 [Burkholderia cenocepacia
HI2424]
gi|170731774|ref|YP_001763721.1| hypothetical protein Bcenmc03_0419 [Burkholderia cenocepacia MC0-3]
gi|254246513|ref|ZP_04939834.1| hypothetical protein BCPG_01262 [Burkholderia cenocepacia PC184]
gi|105894400|gb|ABF77565.1| protein of unknown function DUF34 [Burkholderia cenocepacia AU
1054]
gi|116646553|gb|ABK07194.1| protein of unknown function DUF34 [Burkholderia cenocepacia HI2424]
gi|124871289|gb|EAY63005.1| hypothetical protein BCPG_01262 [Burkholderia cenocepacia PC184]
gi|169815016|gb|ACA89599.1| protein of unknown function DUF34 [Burkholderia cenocepacia MC0-3]
Length = 248
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 145/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+ GNNAQL + L +RF + ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPEFGNNAQLGEKLGLIGDQRFGEGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+G+ + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGEPDTQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SEST + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSESTTHAAAESGVAFVAAGHHATERY 222
>gi|254491294|ref|ZP_05104474.1| S-adenosyl-methyltransferase MraW [Methylophaga thiooxidans DMS010]
gi|224463423|gb|EEF79692.1| S-adenosyl-methyltransferase MraW [Methylophaga thiooxydans DMS010]
Length = 312
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 179/279 (64%), Gaps = 6/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE I L++ + +G Y+DATFG+GGHS IL L GRL+ +D+D ++V+ G +
Sbjct: 11 VLLNETIAALSV---KADGKYLDATFGRGGHSRAILALLSDDGRLLGLDRDPQAVATGKQ 67
Query: 287 IT--DSRFSIIHNCFTELDIIL-KKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D+RF+I + F+E+ + IDGIL D+G+SS Q+++ RGFSF DGPL
Sbjct: 68 LAQQDNRFAIEYCAFSEMATAAHARLWQNNIDGILMDIGVSSPQLDDAERGFSFSKDGPL 127
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ GISA++WLA A +I VI+ GEER+ K+IA+ IV R PIT TKQL
Sbjct: 128 DMRMNPNAGISAAEWLATAEMDDIAHVIKTLGEERYGKRIARAIVETRDENPITTTKQLA 187
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ K+ +++K+PATRTFQAIRI+IN EL+ L++AL+ L + GR+VVISFHSL
Sbjct: 188 DLVDKASPSREKHKHPATRTFQAIRIFINNELEELTLALEQALDVLAVGGRLVVISFHSL 247
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDRIVK F + P+ P++K + +
Sbjct: 248 EDRIVKRFFRDEARGDDFPAHFPVTVEQLNPRLKIIGKA 286
>gi|430761877|ref|YP_007217734.1| rRNA small subunit methyltransferase H [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011501|gb|AGA34253.1| rRNA small subunit methyltransferase H [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 310
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 163/264 (61%), Gaps = 6/264 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L A+ L I R G Y+D TFG+GGHS IL+ L +GRL+A+D+D +
Sbjct: 9 VLLAPAVRGLAI---RPAGRYVDGTFGRGGHSRAILDALDPQGRLLAMDRDPAAAQAAAA 65
Query: 287 I-TDSRFSIIHNCFTELDIILKKY--NIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF+ CF+ + ++++ ++DG+L DLG+SS Q+ RGFSF DGPL
Sbjct: 66 LEQDPRFAFRQGCFSSMADRVRQHWPGDGRVDGVLLDLGVSSPQLGAPERGFSFQQDGPL 125
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD GI AS+WL A E I VI YGEERF+++IA+ IV R + P+TRT+QL
Sbjct: 126 DMRMDPGAGIPASEWLNRAPEQAIADVIYRYGEERFSRRIARAIVAARQVEPLTRTRQLA 185
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ +++ + ++PATRTFQA+RI++N EL L L+ L R+VVISFHSL
Sbjct: 186 ELVRRAVPRVEPGRHPATRTFQALRIHVNDELAELRTWLETVPGILRASARLVVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPI 487
EDR+VK + P + R LP+
Sbjct: 246 EDRLVKRAFQGRSDRPRLPRGLPV 269
>gi|350560702|ref|ZP_08929542.1| S-adenosyl-methyltransferase MraW [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349782970|gb|EGZ37253.1| S-adenosyl-methyltransferase MraW [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 310
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 168/272 (61%), Gaps = 9/272 (3%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L A+ L I R G Y+D TFG+GGHS IL+ L +G+L+A+D+D +
Sbjct: 9 VLLAPAVRGLAI---RPAGRYVDGTFGRGGHSRAILDALDPQGQLLALDRDPAAAQAAAA 65
Query: 287 IT-DSRFSIIHNCFTELDIILKKY--NIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ D RF+ CF+ + ++++ ++DG+L DLG+SS Q++ RGFSF DGPL
Sbjct: 66 LLQDPRFAFRQGCFSSMADRVRQHWPGDGRVDGVLLDLGVSSPQLDAPERGFSFQHDGPL 125
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD GI AS+WL A E I VI YGEERF+++IA+ IV R + P+TRT+QL
Sbjct: 126 DMRMDPGTGIPASEWLNQAPEQAIADVIHRYGEERFSRRIARAIVAARQVEPLTRTRQLA 185
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
E++ +++ + K+PATRTFQA+RI++N EL L L+ L R+VVISFHSL
Sbjct: 186 ELVRRAVPRVEPGKHPATRTFQALRIHVNDELGELRTWLETVPAILRAGARLVVISFHSL 245
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPK 495
EDR+VK + P + R LP+ L EP+
Sbjct: 246 EDRLVKRAFQGRSDRPRLPRGLPV---LTEPR 274
>gi|89093964|ref|ZP_01166909.1| hypothetical protein MED92_01669 [Neptuniibacter caesariensis]
gi|89081850|gb|EAR61077.1| hypothetical protein MED92_01669 [Neptuniibacter caesariensis]
Length = 253
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 150/219 (68%), Gaps = 5/219 (2%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
++L + ++DYCPNGLQVEG +++IV+GVTAS LI A+++ ADA+LVHHGYFWKGE
Sbjct: 14 QRLTPELFKDYCPNGLQVEGCEEVSLIVSGVTASQALIDKAIELKADAVLVHHGYFWKGE 73
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGW 625
+S I KKKR++ L+ N I+L AYHLPLD HP LGNNAQLA++L + T N
Sbjct: 74 DSCITRTKKKRIKALLDNDISLIAYHLPLDAHPDLGNNAQLAEVLGINTTGGLEPENPRS 133
Query: 626 IGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDA 685
IG I L K+ + + HI ++ ++P++I + +I I WCTG AQ + A
Sbjct: 134 IGNIGEL-----KEAVPAEAFAKHIAIQLEREPVLISGGDHQIKTIAWCTGGAQGYIDKA 188
Query: 686 INEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
I GV A++SGEISE TV+ +RE+G+ YF+AGHHATERY
Sbjct: 189 IALGVDAFVSGEISEQTVHSARENGIHYFSAGHHATERY 227
>gi|344206032|ref|YP_004791173.1| ribosomal RNA small subunit methyltransferase H [Stenotrophomonas
maltophilia JV3]
gi|343777394|gb|AEM49947.1| Ribosomal RNA small subunit methyltransferase H [Stenotrophomonas
maltophilia JV3]
Length = 327
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 162/250 (64%), Gaps = 9/250 (3%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWEATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIIL----KSIRGNKRYK 417
+ I V+ YGEER +++IA+ IV R P TRT +L E+I +S G+ + +
Sbjct: 154 VEDREIADVLWTYGEERQSRRIARAIVARREKQPFTRTAELAELIASVMPRSKSGSDKSR 213
Query: 418 -NPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNT 476
+PATR+FQAIRI+IN+EL +L L ++L GR+ VISFHSLEDRIVK ++N
Sbjct: 214 IHPATRSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAVISFHSLEDRIVKQYMNRLA 273
Query: 477 KIPHIDRRLP 486
K P +RRLP
Sbjct: 274 KAPPANRRLP 283
>gi|206558733|ref|YP_002229493.1| hypothetical protein BCAL0327 [Burkholderia cenocepacia J2315]
gi|421864025|ref|ZP_16295713.1| hypothetical protein I35_0400 [Burkholderia cenocepacia H111]
gi|444360160|ref|ZP_21161416.1| dinuclear metal center protein, YbgI family [Burkholderia
cenocepacia BC7]
gi|444367241|ref|ZP_21167217.1| dinuclear metal center protein, YbgI family [Burkholderia
cenocepacia K56-2Valvano]
gi|198034770|emb|CAR50637.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358075978|emb|CCE46591.1| hypothetical protein I35_0400 [Burkholderia cenocepacia H111]
gi|443600612|gb|ELT68794.1| dinuclear metal center protein, YbgI family [Burkholderia
cenocepacia BC7]
gi|443603129|gb|ELT71154.1| dinuclear metal center protein, YbgI family [Burkholderia
cenocepacia K56-2Valvano]
Length = 248
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+ GNNAQL + L +RF + ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPEFGNNAQLGEKLGLIGEQRFGEGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVENTLGRTPLVLGDPDTQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SEST + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSESTTHAAAESGVAFVAAGHHATERY 222
>gi|408374365|ref|ZP_11172053.1| methyltransferase [Alcanivorax hongdengensis A-11-3]
gi|407765823|gb|EKF74272.1| methyltransferase [Alcanivorax hongdengensis A-11-3]
Length = 311
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 173/276 (62%), Gaps = 7/276 (2%)
Query: 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCF 299
R NG Y+D TFG+GGHS +L RL +GRL+ +D+D ++++ G + D RF I + F
Sbjct: 24 RSNGFYVDGTFGRGGHSRALLRRLDDQGRLVGVDRDPQAIAEGQALAEQDHRFHIKASRF 83
Query: 300 TELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWL 359
L ++ + IDG+L DLG+SS Q+++ RGFSFL DGPLDMRMD TRG S ++WL
Sbjct: 84 DCLPELVADAG-RPIDGLLLDLGVSSPQLDDASRGFSFLRDGPLDMRMDPTRGESVAQWL 142
Query: 360 ANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNP 419
A A E I V+ YGEER +++IA+ I R PITRT +L +I + + K+P
Sbjct: 143 ARAEEKEIADVLYRYGEERKSRRIARRICEVRDEQPITRTAELASLIEGVLGRAEPGKHP 202
Query: 420 ATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFI-NFNTKI 478
ATR+FQA+RI+IN EL+ L L+ + L I GR+ +ISFHSLEDR+VK FI + + +
Sbjct: 203 ATRSFQALRIHINGELEALEKVLEQALETLAIGGRLAIISFHSLEDRMVKLFIRDHSGRA 262
Query: 479 PHIDRRLPIYNYL---FEPKMKFLARCKPKKKLNIK 511
P LP+ + L EP K + K + K+N +
Sbjct: 263 PKGRGGLPLGDELPQRLEPVGKAIRAGKAELKVNAR 298
>gi|334131620|ref|ZP_08505382.1| hypothetical protein METUNv1_02444 [Methyloversatilis universalis
FAM5]
gi|333443093|gb|EGK71058.1| hypothetical protein METUNv1_02444 [Methyloversatilis universalis
FAM5]
Length = 248
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEG + +V GVTAS LI+ A++ A A+LVHHG+FW+GE+
Sbjct: 14 LEAARFKDYCPNGLQVEGAPEVRKVVCGVTASQALIEAAIERGAQALLVHHGWFWRGEDG 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ G+KK R+ +L+ + INL+AYHLPLD H +LGNNAQL ++L + T + W+G
Sbjct: 74 RVTGMKKARMARLLAHDINLFAYHLPLDAHAELGNNAQLGRVLGLTPTGVAGDQGLLWLG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + + L + +G+ P+++GD + + + WCTG AQ AI
Sbjct: 134 ET--------AQPVAASVLAQQVGEALGRAPLLVGDACRSVRRVAWCTGGAQGYFEQAIA 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
EGV Y+SGEISE T +++RESGV Y AAGHHATERY
Sbjct: 186 EGVDLYLSGEISEQTTHLARESGVPYIAAGHHATERY 222
>gi|88799431|ref|ZP_01115008.1| S-adenosyl-methyltransferase [Reinekea blandensis MED297]
gi|88777741|gb|EAR08939.1| S-adenosyl-methyltransferase [Reinekea sp. MED297]
Length = 315
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 167/279 (59%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E + +++ + G+Y+D TFG+GGHS +L RL RLI DKD +++ N+
Sbjct: 14 VLLHETVEAVDVGS----GVYVDGTFGRGGHSRLLLSRLDADARLIVFDKDPLAIATANE 69
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ DSR +++ F EL +LK+ + ++ GIL DLG+SS Q+++ RGFSF DGPL
Sbjct: 70 LAAEDSRVTVVQRGFAELSSVLKQAGLMGQVSGILLDLGVSSPQLDDAERGFSFRADGPL 129
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRM+ G SA++W+A +E + V+ YG+ERF+++IA+ IV R PI RT QL
Sbjct: 130 DMRMNPESGESAAQWIARVSEKELADVLFQYGDERFSRRIARAIVTARQKQPIERTLQLA 189
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EII + K+PAT++FQAIRI +N EL L L L GR+ VISFHSL
Sbjct: 190 EIIKTAHPKWDHKKHPATKSFQAIRIAVNGELDELDAVLSASVGALKPGGRLAVISFHSL 249
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
EDR VK FI K P + LP+ + MK + +
Sbjct: 250 EDRAVKQFIKLQAKGPELPPGLPVRDEDIHVTMKAVGKA 288
>gi|220933928|ref|YP_002512827.1| hypothetical protein Tgr7_0748 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995238|gb|ACL71840.1| protein of unknown function DUF34 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 250
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 9/217 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQVEG + + +GVTAS I+ A+D ADA+LVHHGYFWKGE++
Sbjct: 15 LECSRFSDYCPNGLQVEGGRPVRKLASGVTASRAFIEAAIDWGADALLVHHGYFWKGEDA 74
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ G+K++RL L+ + ++L AYHLPLD HP+LGNNAQLA+ L+F ++ IG G
Sbjct: 75 RVTGMKRERLRLLLAHDVSLLAYHLPLDAHPELGNNAQLARRLDFQVEGVLREDGIGLTG 134
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVI-GDLNKKIYEIGWCTGAAQNLLTDAI 686
+ + + L H+ ++G+ P+ I G ++ I IGWCTGAAQ + A
Sbjct: 135 RP--------AAPMDGQTLADHLAERLGRAPLWIPGGADRPIERIGWCTGAAQGFIEQAA 186
Query: 687 NEGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
G+ AY+SGEISE TV+++RE+G+ YFAAGHHATER
Sbjct: 187 ALGLDAYVSGEISEQTVHVAREAGIHYFAAGHHATER 223
>gi|424667055|ref|ZP_18104080.1| ribosomal RNA small subunit methyltransferase H [Stenotrophomonas
maltophilia Ab55555]
gi|401069724|gb|EJP78245.1| ribosomal RNA small subunit methyltransferase H [Stenotrophomonas
maltophilia Ab55555]
Length = 322
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWDATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
+ I V+ YGEER +++IA+ IV R P +RT +L E+I + K +PAT
Sbjct: 154 VEDREIADVLWTYGEERQSRRIARAIVARREKQPFSRTAELAELIASVMPRGKDKIHPAT 213
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L ++L GR+ VISFHSLEDRIVK ++N K P
Sbjct: 214 RSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAVISFHSLEDRIVKQYMNRLAKAPPT 273
Query: 482 DRRLP 486
+RRLP
Sbjct: 274 NRRLP 278
>gi|170699497|ref|ZP_02890539.1| protein of unknown function DUF34 [Burkholderia ambifaria IOP40-10]
gi|170135584|gb|EDT03870.1| protein of unknown function DUF34 [Burkholderia ambifaria IOP40-10]
Length = 248
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 143/217 (65%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+LGNNAQL + L +RF ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGQKLGLIGEQRFGDGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDADMQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SE + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSEPVTHAAAESGVAFVAAGHHATERY 222
>gi|148360438|ref|YP_001251645.1| S-adenosylmethyl transferase MraW [Legionella pneumophila str.
Corby]
gi|263456280|sp|A5IFZ9.1|RSMH_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|148282211|gb|ABQ56299.1| S-adenosylmethyl transferase MraW [Legionella pneumophila str.
Corby]
gi|307609707|emb|CBW99217.1| hypothetical protein LPW_09981 [Legionella pneumophila 130b]
Length = 308
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 163/249 (65%), Gaps = 6/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L I + +GIY D TFG+GGHS +IL L KGRL AIDKD ++V
Sbjct: 7 VLLHESIKGLAI---KADGIYFDGTFGRGGHSREILNHLSDKGRLFAIDKDLDAVQYAKD 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I H F ++ + I +DGIL DLG+SS Q++N RGFSF+L GPL
Sbjct: 64 YFGLDKRFQIFHGSFAQIKEFASQAGVIGAVDGILLDLGVSSPQLDNPERGFSFMLQGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD+T+ I+A+ ++ A + V + YGEERFA +IAK IV R + PIT T +L
Sbjct: 124 DMRMDLTQSINAANFVNEAEVNELAHVFRAYGEERFAGRIAKAIVDARKLKPITTTLELA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ ++ +++K+PATR FQAIRI++NQEL +LS L+ L +GR+ VISFHSL
Sbjct: 184 EIVKEANPKWEKHKHPATRVFQAIRIHVNQELTDLSNCLEQCLDVLGPRGRLAVISFHSL 243
Query: 464 EDRIVKNFI 472
EDRIVK F+
Sbjct: 244 EDRIVKQFM 252
>gi|319760278|ref|YP_004124216.1| S-adenosyl-L-methionine-dependent methyltransferase [Candidatus
Blochmannia vafer str. BVAF]
gi|318038992|gb|ADV33542.1| S-adenosyl-L-methionine-dependent methyltransferase [Candidatus
Blochmannia vafer str. BVAF]
Length = 330
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 181/260 (69%), Gaps = 11/260 (4%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EAI LNI+ +GIYID TFG GGHS IL +L K GRLIA DKD SV +G
Sbjct: 6 VLLHEAIEALNIDP---SGIYIDGTFGSGGHSRLILSKLTKFGRLIAFDKDHLSVEIGKT 62
Query: 287 I--TDSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
I DSRFSI+H F++ ++ + + I+GIL DLGI NQ+ + RGFSF+ DGPL
Sbjct: 63 IFNQDSRFSIVHMSFSKAMNYVHNVKLLGSINGILLDLGICENQLFDANRGFSFIKDGPL 122
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMDIT G +A++W+A +++ +I V+++ GEERF KKIAK I+ +R I PI RT +L
Sbjct: 123 DMRMDITTGQTAAQWIAMSSQEHITWVLKNLGEERFCKKIAKSILFHRRIRPIVRTHELS 182
Query: 404 EIIL-----KSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVI 458
+I+ I+ N K+PATR+F AIR++IN+EL+ ++ LK + L+ KGR+V+I
Sbjct: 183 KIVSDIIVPSRIKKNSWNKHPATRSFLAIRMHINKELEAIAKVLKDMYNLLSNKGRLVII 242
Query: 459 SFHSLEDRIVKNFINFNTKI 478
SF+SLEDR+VK+FI +++I
Sbjct: 243 SFNSLEDRLVKHFIYKHSRI 262
>gi|78065015|ref|YP_367784.1| hypothetical protein Bcep18194_A3538 [Burkholderia sp. 383]
gi|77965760|gb|ABB07140.1| protein of unknown function DUF34 [Burkholderia sp. 383]
Length = 248
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEPP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+ GNNAQL + L +RF + ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPEYGNNAQLGERLGLIGEQRFGEGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GDL+ ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDLDMQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SE + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSEYVTHTAAESGVAFVAAGHHATERY 222
>gi|296106496|ref|YP_003618196.1| S-adenosylmethyl transferase MraW [Legionella pneumophila 2300/99
Alcoy]
gi|295648397|gb|ADG24244.1| S-adenosylmethyl transferase MraW [Legionella pneumophila 2300/99
Alcoy]
Length = 308
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 163/249 (65%), Gaps = 6/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L I + +GIY D TFG+GGHS +IL L KGRL AIDKD ++V
Sbjct: 7 VLLHESIKGLAI---KADGIYFDGTFGRGGHSREILNHLSDKGRLFAIDKDLDAVQYAKD 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I H F ++ + I +DGIL DLG+SS Q++N RGFSF+L GPL
Sbjct: 64 YFGLDKRFQIFHGSFAQIKEFASQAGVIGAVDGILLDLGVSSPQLDNPERGFSFMLQGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD+T+ I+A+ ++ A + V + YGEERFA +IAK IV R + PIT T +L
Sbjct: 124 DMRMDLTQSINAANFVNEAEVNELAHVFRAYGEERFAGRIAKAIVDARKLKPITTTLELA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ ++ +++K+PATR FQAIRI++NQEL +LS L+ L +GR+ VISFHSL
Sbjct: 184 EIVKEANPKWEKHKHPATRVFQAIRIHVNQELTDLSNCLEECLDVLGPRGRLAVISFHSL 243
Query: 464 EDRIVKNFI 472
EDRIVK F+
Sbjct: 244 EDRIVKQFM 252
>gi|171462979|ref|YP_001797092.1| S-adenosyl-methyltransferase MraW [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|262824846|sp|B1XT01.1|RSMH_POLNS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|171192517|gb|ACB43478.1| S-adenosyl-methyltransferase MraW [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 316
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 166/261 (63%), Gaps = 6/261 (2%)
Query: 246 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII 305
+ ID TFG+GGH+ +L+ L +I+ DKD +++++ KI D R I+H+ F ++D
Sbjct: 33 LVIDGTFGRGGHTQALLKELNPSAHMISFDKDLDAIAVAQKINDPRLKIVHDSFAQMD-- 90
Query: 306 LKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEF 365
+ + +DGIL DLGISS Q++ RGFSF +GPLDMRM+ G++A++WL A+
Sbjct: 91 -QYAEAESVDGILLDLGISSPQVDEAHRGFSFRREGPLDMRMNTDHGLTAAEWLEQASLE 149
Query: 366 NIKKVIQDYGEERFAKKIAKEIVHYRSIT-PITRTKQLVEIILKSIRGNKRYKNPATRTF 424
I VI+ YGEERFA +IA+ IV R P T QL ++ +R + ++PATRTF
Sbjct: 150 EITHVIKTYGEERFAFQIARAIVAKREDGLPPKTTTQLASLVSSVVRTREAGQDPATRTF 209
Query: 425 QAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDRR 484
QA+RI+IN+EL++L + LK K L R+ VISFHSLEDRIVK F+ + K+ + R
Sbjct: 210 QALRIFINRELEDLELGLKAAMKLLKPGARLAVISFHSLEDRIVKQFMQAHAKV-DVPRG 268
Query: 485 LPIYNY-LFEPKMKFLARCKP 504
LP+ L + +K ++R KP
Sbjct: 269 LPVREKDLPQSALKIISRLKP 289
>gi|254525262|ref|ZP_05137317.1| S-adenosyl-methyltransferase MraW [Stenotrophomonas sp. SKA14]
gi|219722853|gb|EED41378.1| S-adenosyl-methyltransferase MraW [Stenotrophomonas sp. SKA14]
Length = 322
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 156/245 (63%), Gaps = 4/245 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWDATADGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
+ I V+ YGEER +++IA+ IV R P TRT +L E++ + K +PAT
Sbjct: 154 VEDREIADVLWTYGEERQSRRIARAIVARREKQPFTRTAELAELVASVMPRGKDKIHPAT 213
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L ++L GR+ +ISFHSLEDRIVK ++N K P
Sbjct: 214 RSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAIISFHSLEDRIVKQYMNRLAKAPPA 273
Query: 482 DRRLP 486
+RRLP
Sbjct: 274 NRRLP 278
>gi|416948856|ref|ZP_11935243.1| hypothetical protein B1M_24860 [Burkholderia sp. TJI49]
gi|325523458|gb|EGD01781.1| hypothetical protein B1M_24860 [Burkholderia sp. TJI49]
Length = 248
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L I +++DYCPNGLQVEGR I+ I TGVTAS ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LEIARFKDYCPNGLQVEGRRKIDRIATGVTASAAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+ GNNAQL + L +RF + ++GW+
Sbjct: 74 QITGRKYRRLKLLLANDLNLFAFHLPLDAHPEFGNNAQLGEKLGLIGEQRFGEGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDPDLQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SE + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSEYVTHTAAESGVAFVAAGHHATERY 222
>gi|323527505|ref|YP_004229658.1| hypothetical protein BC1001_3184 [Burkholderia sp. CCGE1001]
gi|323384507|gb|ADX56598.1| protein of unknown function DUF34 [Burkholderia sp. CCGE1001]
Length = 248
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 140/213 (65%), Gaps = 8/213 (3%)
Query: 512 KYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVG 571
+++DYCPNGLQVEGR + + TGVTAS+ ++ A++ ADA+LVHHGYFW+ E I G
Sbjct: 18 RFKDYCPNGLQVEGRRKVGKLATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAPQITG 77
Query: 572 IKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIIN 631
K RL+ L+ N +NL+AYHLPLD HP+ GNNAQ+ + + RF +N++GW+
Sbjct: 78 RKYARLKLLLANDLNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLA---- 133
Query: 632 LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVT 691
F IT+ I + +G+ P+V GD ++ + + WCTGAAQ + AI G
Sbjct: 134 ----TFAMPITLAHFTAEIEQTLGRTPLVFGDPDRMLRRVAWCTGAAQGMFDAAITAGAD 189
Query: 692 AYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GE+SES ++ S ESGVA+ AAGHHATER+
Sbjct: 190 VYLTGEVSESVMHTSAESGVAFLAAGHHATERF 222
>gi|194364373|ref|YP_002026983.1| S-adenosyl-methyltransferase MraW [Stenotrophomonas maltophilia
R551-3]
gi|262826731|sp|B4SJW8.1|RSMH_STRM5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|194347177|gb|ACF50300.1| S-adenosyl-methyltransferase MraW [Stenotrophomonas maltophilia
R551-3]
Length = 322
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK--ITDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +L +LG +GRL+ +DKD E++++ + D R SI F +
Sbjct: 36 NGRYLDGTFGRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQ 95
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L + + +DG+LFDLG+SS Q++ RGFSF DGPLDMRMD G SA++W+
Sbjct: 96 L--LQWDATAEGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINR 153
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
+ I V+ YGEER +++IA+ IV R P +RT +L E+I + K +PAT
Sbjct: 154 VEDREIADVLWTYGEERQSRRIARAIVARREKQPFSRTAELAELIASVMPRGKDKIHPAT 213
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRI+IN+EL +L L ++L GR+ +ISFHSLEDRIVK ++N K P
Sbjct: 214 RSFQAIRIHINRELADLEAGLDAAVERLKPGGRLAIISFHSLEDRIVKQYMNRLAKAPPA 273
Query: 482 DRRLP 486
+RRLP
Sbjct: 274 NRRLP 278
>gi|390950639|ref|YP_006414398.1| S-adenosyl-methyltransferase MraW [Thiocystis violascens DSM 198]
gi|390427208|gb|AFL74273.1| S-adenosyl-methyltransferase MraW [Thiocystis violascens DSM 198]
Length = 322
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 186/314 (59%), Gaps = 17/314 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++ L ++ G+YIDATFG+GGHS IL RLG GRLIA+D+D ++V+
Sbjct: 5 VLLEESVAALALDP---CGLYIDATFGRGGHSRAILARLGAAGRLIALDRDPDAVAAARP 61
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
+ DSRFSI F L +L + ++ + +GIL DLG+SS Q++ RGFSF DGPL
Sbjct: 62 LAALDSRFSIFQGRFGALGEVLAQAGLRGQANGILLDLGVSSPQLDTARRGFSFGSDGPL 121
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD G SA++WLA A + I V++D GEERFA++I + I+ R+ + T QL
Sbjct: 122 DMRMDPQSGESAAQWLARADQDEIVAVLRDLGEERFARRIGRAILETRASGELLTTSQLA 181
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+++ +++ + K+PATRTFQA+RI +N EL + L L GR+VVISFHSL
Sbjct: 182 DLVARAVPTREPGKHPATRTFQALRIQVNDELNEIQRCLAQIPDLLATAGRLVVISFHSL 241
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLAR----------CKPKKKLNIKK- 512
EDRIVK FI ++ P + +P+ ++ L + P+ + I +
Sbjct: 242 EDRIVKRFIRQESRGPVFPKGVPVRAAETHGCLRALGKPVRPSPEEVAANPRARSAIMRV 301
Query: 513 YEDYCPNGLQVEGR 526
E P+G++++ R
Sbjct: 302 AERLAPSGIELDAR 315
>gi|410636515|ref|ZP_11347109.1| hypothetical protein GLIP_1681 [Glaciecola lipolytica E3]
gi|410144127|dbj|GAC14314.1| hypothetical protein GLIP_1681 [Glaciecola lipolytica E3]
Length = 253
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 147/217 (67%), Gaps = 5/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +K +DYCPNGLQVEG++ I IVTGVTA +LI A+++ ADAI VHHGYFW+GEN
Sbjct: 16 LKPEKIKDYCPNGLQVEGKAEIKKIVTGVTACQELINRAIEVKADAIFVHHGYFWRGENP 75
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+K++R++ LI N INL+ YHLPLD+HP+LGNNAQLAK+L + ++N +
Sbjct: 76 CITGMKRQRIKDLIANDINLFGYHLPLDIHPELGNNAQLAKLLKIETSGGLERSNPFSVA 135
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +F +T+ ++ +I + +KP+ I KI + WCTG Q+ + A
Sbjct: 136 -----MQGHFSSPLTLIEVAQNIESTLSRKPLCISGGEHKIKTVAWCTGGGQSYIEMAAE 190
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+G+ A+ISGEISE TV+ +RE G+ Y AAGHHATERY
Sbjct: 191 QGIDAFISGEISEQTVHTAREMGIHYIAAGHHATERY 227
>gi|312795867|ref|YP_004028789.1| NIF3-like protein [Burkholderia rhizoxinica HKI 454]
gi|312167642|emb|CBW74645.1| NIF3-related protein [Burkholderia rhizoxinica HKI 454]
Length = 248
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 138/217 (63%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++ DYCPNGLQVEGR I + TGV+A L++ A+D ADA+LVHHGYFWK E
Sbjct: 14 LETSRFRDYCPNGLQVEGRRRIEKVATGVSACAALLEAAIDWKADAVLVHHGYFWKNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL LI N INL AYHLPLD H +LGNNAQL + + RF N++G++
Sbjct: 74 QITGHKYRRLRLLIQNDINLLAYHLPLDAHAELGNNAQLGARMGWQADARFGDNDLGFLA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ ++ L + +G+ P+V+GD ++K+ + WCTGAAQ +AI
Sbjct: 134 TL--------PMPTSLSHLAAQVGNTLGRAPLVLGDPDRKLRRVAWCTGAAQGYFDEAIR 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGE+SE T +++ ESGVAY +AGHHATERY
Sbjct: 186 AGADVYLSGEVSEPTTHLAAESGVAYVSAGHHATERY 222
>gi|52841149|ref|YP_094948.1| S-adenosyl-methyltransferase MraW [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628260|gb|AAU27001.1| S-adenosylmethyl transferase MraW [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 334
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 167/262 (63%), Gaps = 9/262 (3%)
Query: 217 YFLALRIMG---FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIA 273
+F+ R M + L+E+I L I + +GIY D TFG+GGHS +IL L KGRL A
Sbjct: 20 FFITEREMAKHQSVLLHESIKGLAI---KADGIYFDGTFGRGGHSREILNHLSDKGRLFA 76
Query: 274 IDKDTESVSLGNKI--TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINN 330
IDKD ++V D RF I H F ++ + I +DGIL DLG+SS Q++N
Sbjct: 77 IDKDLDAVQYAKDYFGLDKRFQIFHGSFAQIKEFASQAGVIGAVDGILLDLGVSSPQLDN 136
Query: 331 ELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY 390
RGFSF+L GPLDMRMD+T+ I+A+ ++ A + V + YGEERFA +IAK IV
Sbjct: 137 PERGFSFMLQGPLDMRMDLTQSINAANFVNEAEVNELAHVFRAYGEERFAGRIAKAIVDA 196
Query: 391 RSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLN 450
R + PIT T +L EI+ ++ +++K+PATR FQAIRI++NQEL +LS L+ L
Sbjct: 197 RKLKPITTTLELAEIVKEANPKWEKHKHPATRVFQAIRIHVNQELTDLSNCLEQCLDVLG 256
Query: 451 IKGRIVVISFHSLEDRIVKNFI 472
GR+ VISFHSLEDRIVK F+
Sbjct: 257 PGGRLAVISFHSLEDRIVKQFM 278
>gi|296391155|ref|ZP_06880630.1| putative hydrolase-oxidase [Pseudomonas aeruginosa PAb1]
gi|416876061|ref|ZP_11919037.1| hypothetical protein PA15_13180 [Pseudomonas aeruginosa 152504]
gi|334841339|gb|EGM19971.1| hypothetical protein PA15_13180 [Pseudomonas aeruginosa 152504]
Length = 252
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
+ L+ + +DYCPNGLQVEGR + IV+GVTAS L+ AV+ +AD +LVHHGYFWKG
Sbjct: 13 DRYLDAARIQDYCPNGLQVEGRPQVRRIVSGVTASQALLDAAVEADADVVLVHHGYFWKG 72
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIG 624
EN +VG+K++RL+ L+ N I+L AYHLPLD+HP++GNN QLA+ L F N
Sbjct: 73 ENPCVVGMKQRRLKTLLNNDISLLAYHLPLDLHPEVGNNVQLARQLGFEVEGPLEPGNPR 132
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
I + +L + + D H+ +G++P+++ D + I I WCTG AQ +
Sbjct: 133 SIVLLGSL-----AEPMQPADFARHVRDALGREPLLV-DAGQPIRRIAWCTGGAQGYIDQ 186
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AI GV AY++GE+SE TV+ +RE+GV++ AAGHHATERY
Sbjct: 187 AIAAGVDAYLTGEVSEQTVHSARENGVSFIAAGHHATERY 226
>gi|381158450|ref|ZP_09867683.1| S-adenosyl-methyltransferase MraW [Thiorhodovibrio sp. 970]
gi|380879808|gb|EIC21899.1| S-adenosyl-methyltransferase MraW [Thiorhodovibrio sp. 970]
Length = 324
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 155/244 (63%), Gaps = 3/244 (1%)
Query: 247 YIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT--DSRFSIIHNCFTELDI 304
Y+DATFG+GGH+ +LERLG GRL+A D+D E++ G + D R I H +E
Sbjct: 40 YVDATFGRGGHARALLERLGPDGRLLAFDRDPEAIGAGEALQQRDCRLQISHCRLSETPA 99
Query: 305 ILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANAT 363
LK+ ++ +I G L DLG+SS Q++ RGFSF DGPLDMRMD ++G S WLA A
Sbjct: 100 RLKEMGLQGRIAGFLLDLGVSSPQLDTPARGFSFNQDGPLDMRMDPSQGEPLSAWLAGAP 159
Query: 364 EFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRT 423
I +V++DYGEER+A +IA+ I R+ +T T L +I +S+ + K+PATR+
Sbjct: 160 VAEIVRVLKDYGEERYAARIARAIERERAQRALTTTGALAGLIERSVPTREPGKHPATRS 219
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDR 483
FQA+RI INQEL L L + L GR+VVISFHSLEDRIVK FI + P + +
Sbjct: 220 FQALRIVINQELDELRACLAGVTELLAAGGRLVVISFHSLEDRIVKRFIRDQARGPVLPK 279
Query: 484 RLPI 487
+P+
Sbjct: 280 SVPV 283
>gi|54293889|ref|YP_126304.1| S-adenosyl-methyltransferase MraW [Legionella pneumophila str.
Lens]
gi|54296934|ref|YP_123303.1| S-adenosyl-methyltransferase MraW [Legionella pneumophila str.
Paris]
gi|397663473|ref|YP_006505011.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Legionella pneumophila subsp. pneumophila]
gi|68565457|sp|Q5WXZ4.1|RSMH_LEGPL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|68565459|sp|Q5X6J0.1|RSMH_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|68565463|sp|Q5ZX19.2|RSMH_LEGPH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|53750719|emb|CAH12126.1| hypothetical protein lpp0975 [Legionella pneumophila str. Paris]
gi|53753721|emb|CAH15179.1| hypothetical protein lpl0945 [Legionella pneumophila str. Lens]
gi|395126884|emb|CCD05067.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Legionella pneumophila subsp. pneumophila]
Length = 308
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 162/249 (65%), Gaps = 6/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L I + +GIY D TFG+GGHS +IL L KGRL AIDKD ++V
Sbjct: 7 VLLHESIKGLAI---KADGIYFDGTFGRGGHSREILNHLSDKGRLFAIDKDLDAVQYAKD 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I H F ++ + I +DGIL DLG+SS Q++N RGFSF+L GPL
Sbjct: 64 YFGLDKRFQIFHGSFAQIKEFASQAGVIGAVDGILLDLGVSSPQLDNPERGFSFMLQGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD+T+ I+A+ ++ A + V + YGEERFA +IAK IV R + PIT T +L
Sbjct: 124 DMRMDLTQSINAANFVNEAEVNELAHVFRAYGEERFAGRIAKAIVDARKLKPITTTLELA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ ++ +++K+PATR FQAIRI++NQEL +LS L+ L GR+ VISFHSL
Sbjct: 184 EIVKEANPKWEKHKHPATRVFQAIRIHVNQELTDLSNCLEQCLDVLGPGGRLAVISFHSL 243
Query: 464 EDRIVKNFI 472
EDRIVK F+
Sbjct: 244 EDRIVKQFM 252
>gi|384227664|ref|YP_005619409.1| 16S rRNA m4C1402 methyltransferase [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538604|gb|AEO08581.1| 16S rRNA m4C1402 methyltransferase [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 312
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 166/243 (68%), Gaps = 4/243 (1%)
Query: 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDS 290
E I+ L I+ NGIYID+TFG GGHS +IL++LGK G+L +IDKD + S+G I DS
Sbjct: 14 ELIHSLKIKK---NGIYIDSTFGTGGHSHEILKKLGKDGKLYSIDKDPIAFSIGKNIKDS 70
Query: 291 RFSIIHNCFTEL-DIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDI 349
RF II+ F++L D KK + +++GI+FDLGISS QI+N RGFSF DGPLDMRM+
Sbjct: 71 RFHIINENFSKLLDYAKKKKIVGQVNGIIFDLGISSLQIDNHKRGFSFKKDGPLDMRMNP 130
Query: 350 TRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKS 409
GI AS+WL + I V++ +GEERF+KKIA I IT T +L II KS
Sbjct: 131 NHGIPASEWLFKSNVEEIAFVLKTFGEERFSKKIAYSIKKISQKKKITSTLELANIIKKS 190
Query: 410 IRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVK 469
I ++K+PA R+FQAIRIYINQEL+ + AL+ K L GR+ ++SFHSLEDRIVK
Sbjct: 191 IPIKNKFKHPARRSFQAIRIYINQELEEIKKALESTLKILKPGGRVSILSFHSLEDRIVK 250
Query: 470 NFI 472
F+
Sbjct: 251 KFM 253
>gi|332283258|ref|YP_004415169.1| S-adenosyl-methyltransferase MraW [Pusillimonas sp. T7-7]
gi|330427211|gb|AEC18545.1| S-adenosyl-methyltransferase MraW [Pusillimonas sp. T7-7]
Length = 357
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 171/267 (64%), Gaps = 3/267 (1%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
+G+++D TFG+GGHS +L RL +L+ DKD E+++ + D R ++H+ F
Sbjct: 40 DGVFVDGTFGRGGHSRLLLSRLSPDAKLVVFDKDPEAIAAAQALRQEDERVVVVHSGFAN 99
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
+ L+ I +++G++ DLGISS QI++ RGFSF+ +GPLDMRMD + G++A++WLA
Sbjct: 100 MPAQLQALGITEVNGVMLDLGISSPQIDDASRGFSFMREGPLDMRMDTSSGLTAAQWLAQ 159
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
+K+VI YGEERFA +IAK ++ R P+ T L E++ +R ++ ++PAT
Sbjct: 160 VDIDELKEVIAKYGEERFAFQIAKAVIARRESRPLRTTLDLAELVASVVRTREKGQHPAT 219
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRIY+NQEL+ L++AL + L GR+ VISFHSLEDR+VK I ++ +
Sbjct: 220 RTFQAIRIYLNQELQELALALAAVLRVLAPGGRLAVISFHSLEDRMVKQCIAAASRPAAV 279
Query: 482 DRRLPIYNY-LFEPKMKFLARCKPKKK 507
RLPI + +P + L R P ++
Sbjct: 280 HARLPILEKDMPQPILNSLGRILPTEQ 306
>gi|402567826|ref|YP_006617171.1| hypothetical protein GEM_3082 [Burkholderia cepacia GG4]
gi|402249023|gb|AFQ49477.1| protein of unknown function DUF34 [Burkholderia cepacia GG4]
Length = 248
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+ GNNAQL L +RF ++GW+
Sbjct: 74 QITGRKYQRLKLLLANDLNLFAFHLPLDAHPEFGNNAQLGAKLGLLGEQRFGDGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDADTQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SE + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSEPVTHAAAESGVAFVAAGHHATERY 222
>gi|387128262|ref|YP_006296867.1| dinuclear metal center protein [Methylophaga sp. JAM1]
gi|386275324|gb|AFI85222.1| dinuclear metal center protein [Methylophaga sp. JAM1]
Length = 252
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 147/222 (66%), Gaps = 11/222 (4%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
++L + +++DYCPNGLQVEG+ +N++VTGVTAS L++ AV+ NADA++VHHGYFW+GE
Sbjct: 13 EQLEVSRFQDYCPNGLQVEGKPEVNILVTGVTASQALLEAAVEHNADALMVHHGYFWRGE 72
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNN--- 622
+ GIK +RL+ LI N INL YHLPLD H + GNN QLAKILN +
Sbjct: 73 APAVTGIKYQRLKMLINNDINLIGYHLPLDAHAEFGNNIQLAKILNIEMDGFIAGTGEPA 132
Query: 623 IGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLL 682
IG+ GK+ + T+ + HI ++ +KP +I ++ I +GWCTGAAQ +
Sbjct: 133 IGFRGKLATPQ--------TLDEFASHIACQLDRKPTIITGHDRLIKTVGWCTGAAQGYI 184
Query: 683 TDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
A G+ A+ISGE SE T +++RE G+ Y AAGHHATERY
Sbjct: 185 QQAAESGLDAFISGEASEQTTHLARELGIHYIAAGHHATERY 226
>gi|388455866|ref|ZP_10138161.1| 16S rRNA m(4)C1402 methyltranserfase [Fluoribacter dumoffii Tex-KL]
Length = 308
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 162/249 (65%), Gaps = 6/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE+I L I++ GIY D TFG+GGHS +IL L +GRL AIDKD +++ +
Sbjct: 7 VLLNESIEALAIKS---GGIYFDGTFGRGGHSREILRHLNDQGRLFAIDKDLDAIEYAKE 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I F + + + K+DGIL DLG+SS Q++N RGFSF+ GPL
Sbjct: 64 HLGQDKRFHIFQGSFARIQEFAAEAGVLGKVDGILLDLGVSSPQLDNPERGFSFMQQGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD ++ +SA++++ A + V + YGEERFA +IAK IV R+I PI+ T QL
Sbjct: 124 DMRMDKSQPLSAARFVNEAEAEEMASVFRLYGEERFAGRIAKAIVAARTIAPISTTLQLA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ ++ +++K+PATR FQAIRIYINQEL +L L+ L KGR+ VISFHSL
Sbjct: 184 EIVKEANPKWEKHKHPATRVFQAIRIYINQELNDLKSCLEQCINVLAPKGRLAVISFHSL 243
Query: 464 EDRIVKNFI 472
EDRIVK F+
Sbjct: 244 EDRIVKQFM 252
>gi|296135356|ref|YP_003642598.1| hypothetical protein Tint_0874 [Thiomonas intermedia K12]
gi|295795478|gb|ADG30268.1| protein of unknown function DUF34 [Thiomonas intermedia K12]
Length = 247
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L+ ++ DYCPNGLQVEGR I IVTGVTASL LI+ A+ + ADA+LVHHGYFW+GE+
Sbjct: 14 LDCARFTDYCPNGLQVEGREEIARIVTGVTASLALIERAIALRADALLVHHGYFWRGEDP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I+ K+KRL L+ +NL+AYHLPLD H ++GNN LA+ L +S RF K +G +G
Sbjct: 74 RIIRQKRKRLGLLLAADLNLFAYHLPLDAHGEVGNNVMLARRLGWSVQGRFGKQQLGCLG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
TI L H + R +G+ P+V+G+ + + + WCTG AQ+ + DA
Sbjct: 134 SAPQ---------ATIGQLAHAVARDLGRTPLVVGEGDAPVGTLAWCTGGAQDWIEDAWA 184
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
G ++SGEISE T + +RE G+ Y A GHHATER
Sbjct: 185 AGARTFVSGEISEPTAHFAREMGITYLACGHHATER 220
>gi|254281944|ref|ZP_04956912.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium NOR51-B]
gi|219678147|gb|EED34496.1| S-adenosyl-methyltransferase MraW [gamma proteobacterium NOR51-B]
Length = 306
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 174/284 (61%), Gaps = 8/284 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA+ L +G Y+D T+G+GGHS ++L L + GRLI DKD E+
Sbjct: 8 VLLEEAVTALITT---ADGTYVDGTYGRGGHSRRVLAALSEAGRLIGFDKDPEAAVHAED 64
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ TDSRFS H F ++ I K + G+L DLG+SS Q++N RGFSF DGPLD
Sbjct: 65 LAATDSRFSFFHRSFADIPDI--KRPEQGFSGVLLDLGVSSPQLDNGERGFSFQSDGPLD 122
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD + G++A+ W+ A + +V +DYGEERFA +IA I+ R TPI RT +L +
Sbjct: 123 MRMDSSSGVTAAVWINKAPLAELIQVFRDYGEERFATRIANAIIDAREETPIERTGRLAQ 182
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
I+ + + +K+PATR FQAIRI+IN+EL++L L L++ GR+VVISFHSLE
Sbjct: 183 IVKVAHPRWEPHKHPATRVFQAIRIFINRELEDLESVLVRVIDTLDVGGRLVVISFHSLE 242
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC-KPKKK 507
DRIVK F+ ++ + R +PI + +++ + + KP +
Sbjct: 243 DRIVKRFMRDESRGVSVPRGVPIRDADMGRRLRVVGKAVKPSTE 286
>gi|348618262|ref|ZP_08884792.1| Conserved hypothetical protein DUF34 [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816509|emb|CCD29496.1| Conserved hypothetical protein DUF34 [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 248
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + ++ DYCPNGLQVEG+ +I + TGVTAS L++ A+ ADA LVHHG+FWK E
Sbjct: 14 LEVDRFRDYCPNGLQVEGQRDIRKLATGVTASRALLEAALAWGADAALVHHGFFWKNEPL 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL L+ N ++L+AYHLPLD HP+LGNNAQL + L RF +GWIG
Sbjct: 74 PIRGWKYQRLRLLLANGMHLFAYHLPLDAHPELGNNAQLGQRLGVCAEGRFGDQELGWIG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + +T+ + +G+ P+ +GD + I + WCTGAAQ+ +DAI
Sbjct: 134 TL--------PEPVTLAAFSAQVNDALGRAPLALGDAKRSIRRVAWCTGAAQSFFSDAIQ 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G Y+SGE+SEST +++RESGVAY AAGHHATERY
Sbjct: 186 AGADLYLSGEVSESTTHLARESGVAYLAAGHHATERY 222
>gi|451986223|ref|ZP_21934412.1| Hypothetical protein YbgI [Pseudomonas aeruginosa 18A]
gi|451756119|emb|CCQ86935.1| Hypothetical protein YbgI [Pseudomonas aeruginosa 18A]
Length = 252
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
+ L+ + +DYCPNGLQVEGR + IV+GVTAS L+ AV+ +AD +LVHHGYFWKG
Sbjct: 13 DRYLDAARIQDYCPNGLQVEGRPQVRRIVSGVTASQALLDAAVEADADVVLVHHGYFWKG 72
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIG 624
EN +VG+K++RL+ L+ N I+L AYHLPLD+HP++GNN QLA+ L F N
Sbjct: 73 ENPCVVGMKQRRLKTLLNNDISLLAYHLPLDLHPEVGNNVQLARQLGFEVEGPLEPGNPR 132
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
I + +L + + D H+ +G++P+++ D + I I WCTG AQ +
Sbjct: 133 SIVLLGSL-----AEPMQPTDFARHVRDALGREPLLV-DAGQPIRRIAWCTGGAQGYIDQ 186
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AI GV AY++GE+SE TV+ +RE+G+++ AAGHHATERY
Sbjct: 187 AIAAGVDAYLTGEVSEQTVHSARENGISFIAAGHHATERY 226
>gi|397666593|ref|YP_006508130.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Legionella pneumophila subsp. pneumophila]
gi|395130004|emb|CCD08237.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [Legionella pneumophila subsp. pneumophila]
Length = 308
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 162/249 (65%), Gaps = 6/249 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+E+I L I + +GIY D TFG+GGHS +IL L KGRL AIDKD ++V
Sbjct: 7 VLLHESIKGLAI---KADGIYFDGTFGRGGHSREILNHLSDKGRLFAIDKDLDAVQYAKD 63
Query: 287 I--TDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I H F ++ + I +DGIL DLG+SS Q++N RGFSF+L GPL
Sbjct: 64 YFGLDKRFQIFHGSFAQIKEFASQAGVIGAVDGILLDLGVSSPQLDNPERGFSFMLQGPL 123
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD+T+ I+A+ ++ A + + + YGEERFA +IAK IV R + PIT T +L
Sbjct: 124 DMRMDLTQSINAANFVNEAEVNELAHIFRAYGEERFAGRIAKAIVDARKLKPITTTLELA 183
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
EI+ ++ +++K+PATR FQAIRI++NQEL +LS L+ L GR+ VISFHSL
Sbjct: 184 EIVKEANPKWEKHKHPATRVFQAIRIHVNQELTDLSNCLEQCLDVLGPGGRLAVISFHSL 243
Query: 464 EDRIVKNFI 472
EDRIVK F+
Sbjct: 244 EDRIVKQFM 252
>gi|15599641|ref|NP_253135.1| hypothetical protein PA4445 [Pseudomonas aeruginosa PAO1]
gi|107099970|ref|ZP_01363888.1| hypothetical protein PaerPA_01000991 [Pseudomonas aeruginosa PACS2]
gi|116052477|ref|YP_792790.1| hypothetical protein PA14_57740 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893536|ref|YP_002442405.1| hypothetical protein PLES_48241 [Pseudomonas aeruginosa LESB58]
gi|254238893|ref|ZP_04932216.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254244742|ref|ZP_04938064.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313107029|ref|ZP_07793232.1| hypothetical protein PA39016_000840131 [Pseudomonas aeruginosa
39016]
gi|355650295|ref|ZP_09055995.1| hypothetical protein HMPREF1030_05081 [Pseudomonas sp. 2_1_26]
gi|386060597|ref|YP_005977119.1| hypothetical protein PAM18_4536 [Pseudomonas aeruginosa M18]
gi|386064110|ref|YP_005979414.1| hypothetical protein NCGM2_1158 [Pseudomonas aeruginosa NCGM2.S1]
gi|392986009|ref|YP_006484596.1| hypothetical protein PADK2_23155 [Pseudomonas aeruginosa DK2]
gi|418583916|ref|ZP_13147982.1| hypothetical protein O1O_04631 [Pseudomonas aeruginosa MPAO1/P1]
gi|418589710|ref|ZP_13153631.1| hypothetical protein O1Q_03923 [Pseudomonas aeruginosa MPAO1/P2]
gi|419751990|ref|ZP_14278399.1| hypothetical protein CF510_03175 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421155809|ref|ZP_15615275.1| hypothetical protein PABE171_4636 [Pseudomonas aeruginosa ATCC
14886]
gi|421176586|ref|ZP_15634249.1| hypothetical protein PACI27_4791 [Pseudomonas aeruginosa CI27]
gi|421182503|ref|ZP_15639979.1| hypothetical protein PAE2_4454 [Pseudomonas aeruginosa E2]
gi|421518998|ref|ZP_15965671.1| hypothetical protein A161_22088 [Pseudomonas aeruginosa PAO579]
gi|424944790|ref|ZP_18360553.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|20978845|sp|Q9HVX2.1|Y4445_PSEAE RecName: Full=UPF0135 protein PA4445
gi|9950680|gb|AAG07833.1|AE004859_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587698|gb|ABJ13713.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170824|gb|EAZ56335.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198120|gb|EAZ62183.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773764|emb|CAW29578.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310879734|gb|EFQ38328.1| hypothetical protein PA39016_000840131 [Pseudomonas aeruginosa
39016]
gi|346061236|dbj|GAA21119.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|347306903|gb|AEO77017.1| hypothetical protein PAM18_4536 [Pseudomonas aeruginosa M18]
gi|348032669|dbj|BAK88029.1| hypothetical protein NCGM2_1158 [Pseudomonas aeruginosa NCGM2.S1]
gi|354826844|gb|EHF11047.1| hypothetical protein HMPREF1030_05081 [Pseudomonas sp. 2_1_26]
gi|375046395|gb|EHS38956.1| hypothetical protein O1O_04631 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051566|gb|EHS44033.1| hypothetical protein O1Q_03923 [Pseudomonas aeruginosa MPAO1/P2]
gi|384401567|gb|EIE47921.1| hypothetical protein CF510_03175 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392321514|gb|AFM66894.1| hypothetical protein PADK2_23155 [Pseudomonas aeruginosa DK2]
gi|404346403|gb|EJZ72753.1| hypothetical protein A161_22088 [Pseudomonas aeruginosa PAO579]
gi|404519986|gb|EKA30695.1| hypothetical protein PABE171_4636 [Pseudomonas aeruginosa ATCC
14886]
gi|404530920|gb|EKA40903.1| hypothetical protein PACI27_4791 [Pseudomonas aeruginosa CI27]
gi|404542090|gb|EKA51429.1| hypothetical protein PAE2_4454 [Pseudomonas aeruginosa E2]
Length = 252
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
+ L+ + +DYCPNGLQVEGR + IV+GVTAS L+ AV+ +AD +LVHHGYFWKG
Sbjct: 13 DRYLDAARIQDYCPNGLQVEGRPQVRRIVSGVTASQALLDAAVEADADVVLVHHGYFWKG 72
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIG 624
EN +VG+K++RL+ L+ N I+L AYHLPLD+HP++GNN QLA+ L F N
Sbjct: 73 ENPCVVGMKQRRLKTLLNNDISLLAYHLPLDLHPEVGNNVQLARQLGFEVEGPLEPGNPR 132
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
I + +L + + D H+ +G++P+++ D + I I WCTG AQ +
Sbjct: 133 SIVLLGSL-----AEPMQPADFARHVRDALGREPLLV-DAGQPIRRIAWCTGGAQGYIDQ 186
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AI GV AY++GE+SE TV+ +RE+G+++ AAGHHATERY
Sbjct: 187 AIAAGVDAYLTGEVSEQTVHSARENGISFIAAGHHATERY 226
>gi|378776867|ref|YP_005185304.1| S-adenosylmethyl transferase MraW [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507681|gb|AEW51205.1| S-adenosylmethyl transferase MraW [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 334
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 166/262 (63%), Gaps = 9/262 (3%)
Query: 217 YFLALRIMG---FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIA 273
+F+ R M + L+E+I L I + +GIY D TFG+GGHS +IL L KGRL A
Sbjct: 20 FFITEREMAKHQSVLLHESIKGLAI---KADGIYFDGTFGRGGHSREILNHLSDKGRLFA 76
Query: 274 IDKDTESVSLGNKI--TDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINN 330
IDKD ++V D RF I H F + + + +DGIL DLG+SS Q++N
Sbjct: 77 IDKDLDAVQYAKDYFGLDKRFQIFHGSFAHIKEFASQAGVLGAVDGILLDLGVSSPQLDN 136
Query: 331 ELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHY 390
RGFSF+L GPLDMRMD+T+ I+A+ ++ A + V + YGEERFA +IAK IV
Sbjct: 137 PERGFSFMLQGPLDMRMDLTQSINAANFVNEAEVNELAHVFRVYGEERFAGRIAKAIVDA 196
Query: 391 RSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLN 450
R + PIT T QL EI+ ++ +++K+PATR FQAIRI++NQEL +LS L+ L
Sbjct: 197 RKLKPITTTLQLAEIVKEANPKWEKHKHPATRVFQAIRIHVNQELTDLSNCLEQCLDVLG 256
Query: 451 IKGRIVVISFHSLEDRIVKNFI 472
GR+ VISFHSLEDRIVK F+
Sbjct: 257 PGGRLAVISFHSLEDRIVKQFM 278
>gi|289663644|ref|ZP_06485225.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 352
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 162/259 (62%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ + D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEQTFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ + DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA+
Sbjct: 95 LGQVVAAATV---DGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAEWLAH 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ASDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIYINRELDDLEAGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 272 NRRLPEAQP-FVPTLQLVS 289
>gi|289671027|ref|ZP_06492102.1| S-adenosyl-methyltransferase MraW [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 352
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 162/259 (62%), Gaps = 6/259 (2%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTE 301
NG Y+D TFG+GGH+ +LE LG GRL+ +DKD E++++ + D+R SI F
Sbjct: 35 NGTYLDGTFGRGGHARGVLEHLGPGGRLLVMDKDPEAIAVAEQTFGGDARVSIHRGSFAG 94
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
L ++ +DGIL DLG+SS Q++ RGFSF DGPLDMRMD G SA++WLA+
Sbjct: 95 LGQVVA---AAAVDGILLDLGVSSPQLDVAGRGFSFGKDGPLDMRMDPDSGQSAAEWLAH 151
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
A++ I V+ YGEER +++IA+ IV R+ P+ RT QL ++I + +PAT
Sbjct: 152 ASDREIADVLWTYGEERQSRRIARAIVARRAEQPLLRTAQLADLIASVMPRGDSKTHPAT 211
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
R+FQAIRIYIN+EL +L L L GR+ VISFHSLEDRIVK F+ K P
Sbjct: 212 RSFQAIRIYINRELDDLEAGLDAALAALKPGGRLAVISFHSLEDRIVKQFMARYAKAPPS 271
Query: 482 DRRLPIYNYLFEPKMKFLA 500
+RRLP F P ++ ++
Sbjct: 272 NRRLPEAQP-FVPTLQLVS 289
>gi|167587681|ref|ZP_02380069.1| hypothetical protein BuboB_20217 [Burkholderia ubonensis Bu]
Length = 248
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASAAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP+ GNNAQL + L RF ++GW+
Sbjct: 74 QITGRKYRRLKLLLANDLNLFAFHLPLDAHPEFGNNAQLGEKLGLIGESRFGDGDLGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + R +G+ P+V+GD +++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVERTLGRTPLVLGDPEQQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SE + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSEPVTHAAAESGVAFVAAGHHATERY 222
>gi|416855051|ref|ZP_11911296.1| hypothetical protein PA13_05551 [Pseudomonas aeruginosa 138244]
gi|416857025|ref|ZP_11912464.1| hypothetical protein PA13_11435 [Pseudomonas aeruginosa 138244]
gi|334841101|gb|EGM19738.1| hypothetical protein PA13_11435 [Pseudomonas aeruginosa 138244]
gi|334843334|gb|EGM21925.1| hypothetical protein PA13_05551 [Pseudomonas aeruginosa 138244]
gi|453046217|gb|EME93934.1| hypothetical protein H123_11875 [Pseudomonas aeruginosa PA21_ST175]
Length = 252
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
+ L+ + +DYCPNGLQVEGR + IV+GVTAS L+ AV+ +AD +LVHHGYFWKG
Sbjct: 13 DRYLDAARIQDYCPNGLQVEGRPQVRRIVSGVTASQALLDAAVEADADVVLVHHGYFWKG 72
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIG 624
EN +VG+K++RL+ L+ N I+L AYHLPLD+HP++GNN QLA+ L F N
Sbjct: 73 ENPCVVGMKQRRLKTLLNNDISLLAYHLPLDLHPEVGNNVQLARQLGFEVEGPLEPGNPR 132
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
I + +L + + D H+ +G++P+++ D + I I WCTG AQ +
Sbjct: 133 SIVLLGSL-----AEPMQSADFARHVRDALGREPLLV-DAGQPIRRIAWCTGGAQGYIDQ 186
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AI GV AY++GE+SE TV+ +RE+G+++ AAGHHATERY
Sbjct: 187 AIAAGVDAYLTGEVSEQTVHSARENGISFIAAGHHATERY 226
>gi|146295951|ref|YP_001179722.1| 16S rRNA m(4)C1402 methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|263446954|sp|A4XHZ6.1|RSMH_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145409527|gb|ABP66531.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 307
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 183/300 (61%), Gaps = 17/300 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E+ ++L + +GIY+DATFG GGHS KILE+L G L+AIDKD E++ LG +
Sbjct: 7 VLLEESTSYLVT---KPDGIYVDATFGLGGHSKKILEKLSSNGFLVAIDKDEEAIELGKE 63
Query: 287 ITD--SRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ I+H+ F+ LD +L I KIDGILFDLG+SS Q++ RGFS+ D LD
Sbjct: 64 KFKKCNNIKIVHSPFSRLDEVLNFLKIDKIDGILFDLGVSSLQLDKPERGFSYNSDSFLD 123
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T ++A + +E ++++I++YGEER+AKKIAKEIV R PIT TK+L +
Sbjct: 124 MRMDKTSKLTAYDVVNKYSEKELERIIREYGEERYAKKIAKEIVKRREQKPITTTKELND 183
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + K NPA RTFQAIRI +N EL+ + +AL+ + L GRI VISFHSLE
Sbjct: 184 LINSVVPRPKDGSNPAKRTFQAIRIEVNGELEEIKVALEKSIRFLKSGGRICVISFHSLE 243
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DRIVK F +++ + +P+ C KK+LNI + P ++E
Sbjct: 244 DRIVKEFFKYHSLECICPKDIPV------------CVCGKKKELNILTKKPITPTKEEIE 291
>gi|393778340|ref|ZP_10366614.1| hypothetical protein MW7_3311 [Ralstonia sp. PBA]
gi|392714611|gb|EIZ02211.1| hypothetical protein MW7_3311 [Ralstonia sp. PBA]
Length = 248
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + ++ DYCPNGLQVEGR ++ +VTGVTASL L++ AVD ADA+LVHHGYFWK E++
Sbjct: 14 LEVDRFRDYCPNGLQVEGRQHVAHLVTGVTASLALLEAAVDAQADAVLVHHGYFWKNEDA 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
IVG K++RL+ L+ + +NL+AYHLPLD HP+ GNNA L + L + RF + +GW G
Sbjct: 74 RIVGQKQRRLQTLLCHDLNLFAYHLPLDAHPEFGNNASLGQRLGLTADGRFGEGELGWTG 133
Query: 628 KI-INLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAI 686
++ +++K + +L H+ + + P+VI + + IGWCTG AQ A+
Sbjct: 134 RLPVDMK---------LPELAAHVQAILQRVPLVIEGDGRTVRRIGWCTGGAQGYFEAAV 184
Query: 687 NEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV ++SGEISE T +++RESGVAY AAGHHATERY
Sbjct: 185 AAGVDVFVSGEISEQTTHLARESGVAYIAAGHHATERY 222
>gi|32490963|ref|NP_871217.1| hypothetical protein WGLp214 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|30173030|sp|Q8D2Y8.1|RSMH_WIGBR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|25166169|dbj|BAC24360.1| yabC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 309
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/286 (47%), Positives = 180/286 (62%), Gaps = 8/286 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE I + I NG YIDATFG GGHS IL +L +KG+LI ID+D +S+
Sbjct: 5 VMLNEVIKSIKIIP---NGTYIDATFGCGGHSRCILSKLNEKGKLIVIDRDPKSIEFACS 61
Query: 287 ITDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPLDM 345
I D R IH F+++ KY I K+ GILFDLG+S +QI + RGFSF+ DGPLDM
Sbjct: 62 IKDRRLIPIHGNFSKILKYSIKYKIFGKVQGILFDLGLSFSQIKDSNRGFSFMHDGPLDM 121
Query: 346 RMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEI 405
RM+ GISA +W+ NA +I VI+++GEE+F KKI+ I YR I I TK+LV +
Sbjct: 122 RMNNLHGISAKEWINNANIKDISFVIKEFGEEKFYKKISNVICKYRKIKNINTTKELVNL 181
Query: 406 ILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLED 465
I K+ + K+PA R+FQAIRIYIN EL+ L +AL K ++ KGRIV ISFHSLED
Sbjct: 182 INKACGYFYKKKHPARRSFQAIRIYINNELQELKLALNDIIKIISPKGRIVFISFHSLED 241
Query: 466 RIVKNFINFNTKIPHIDRRLPIYNYLFEP----KMKFLARCKPKKK 507
RI+K FI N++ +LPI + K+K+ + +P KK
Sbjct: 242 RIIKKFIINNSRKKIYPYKLPILESKIKNDNIYKLKYFKKIQPSKK 287
>gi|163854428|ref|YP_001628726.1| hypothetical protein Bpet0124 [Bordetella petrii DSM 12804]
gi|163258156|emb|CAP40455.1| conserved hypothetical protein [Bordetella petrii]
Length = 258
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 145/224 (64%), Gaps = 15/224 (6%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEG+ + I+TGVTAS L++ A++ ADA+LVHHG+FWK E+
Sbjct: 17 LQAPRFKDYCPNGLQVEGKPRVGHIITGVTASEALLRAAIERGADAVLVHHGWFWKNEDP 76
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILN----FSCTR---RFSK 620
+ G ++ RL + + +NL+AYHLPLD HP+ GNNAQLA++L F T
Sbjct: 77 RVRGPRRTRLAVTLAHDLNLFAYHLPLDAHPQWGNNAQLARVLGLEPEFDATGAPLTCGP 136
Query: 621 NNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+N+ W+G L T+ L + +++G+ P+V+G+ + + + WCTGAAQ
Sbjct: 137 DNLIWLGTAPGLD--------TLDALAERVRQRLGRAPLVVGEPGRPLARVAWCTGAAQG 188
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+L DA+ G AYI+GE SE TV+++RE+G + AGHHATERY
Sbjct: 189 MLADAVQAGADAYITGEASEPTVHLARETGTGFIGAGHHATERY 232
>gi|406942294|gb|EKD74560.1| hypothetical protein ACD_44C00400G0002 [uncultured bacterium]
Length = 310
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 179/279 (64%), Gaps = 7/279 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ LNE + L + E GIY+D TFG+GGHS ILE+L K G+L A DKD E+V + K
Sbjct: 8 VLLNEVLKNLLTQAE---GIYLDLTFGRGGHSKAILEKLNKSGKLFAFDKDHEAVEMAVK 64
Query: 287 IT--DSRFSIIHNCFTELDIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D RF I HN F++L+ I+ ++K KI GIL DLG+SS Q++N RGFSF DG L
Sbjct: 65 ELGYDKRFQIFHNTFSDLEKIISSLDLKGKITGILLDLGVSSPQLDNASRGFSFNKDGVL 124
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLV 403
DMRMD + + A+ W+ +E + V++ +GEERFAK+IA IV+ R PI TK+L
Sbjct: 125 DMRMDQRQTLKANTWINTVSESILLDVLKKFGEERFAKRIAHHIVNARRKNPIHTTKELA 184
Query: 404 EIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSL 463
+I+ ++ + ++PAT+TFQAIRI+IN+EL L+ L L GR+VVISFHSL
Sbjct: 185 KIVAEAHPAWEEGQHPATKTFQAIRIFINKELDELNTCLGQASNVLAPGGRLVVISFHSL 244
Query: 464 EDRIVKNFINFNTKIPHIDRRLPIYNYL-FEPKMKFLAR 501
EDRIVK FI+ N+ + + +P+ + F P +K + +
Sbjct: 245 EDRIVKRFISKNSVGEVLPKEIPLSHAPGFTPTLKKVGK 283
>gi|312622933|ref|YP_004024546.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203400|gb|ADQ46727.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
kronotskyensis 2002]
Length = 307
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 189/301 (62%), Gaps = 17/301 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++++L I N +GIY+DATFG GGHS +ILE++ KG LIAID+D E++ LG +
Sbjct: 7 VLLEESVSFL-ITNP--DGIYVDATFGLGGHSKRILEKISNKGFLIAIDRDLEAIELGKR 63
Query: 287 ITDS--RFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
++ I+H+ F+++D +L+ I+KIDGILFD G+SS Q++ + RGFS+ + LD
Sbjct: 64 KLEAYKNVKIVHSSFSKVDEVLECLGIEKIDGILFDFGVSSLQLDKQERGFSYNKEAFLD 123
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T ++A + ++ +++++I++YGEERFA++IAK IV RS PI T L
Sbjct: 124 MRMDTTSKLTAYDVVNYYSQEDLERIIREYGEERFARRIAKAIVERRSKKPIETTTDLSR 183
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + K +PA RTFQAIRI +N+EL+ + IAL+ + L GRI ISFHSLE
Sbjct: 184 LISSVVPKPKDGSHPAQRTFQAIRIEVNRELEEIKIALEKSLRFLKSGGRICAISFHSLE 243
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DRIVK F F++ + +P+ RC KK+LNI + P+ ++E
Sbjct: 244 DRIVKEFFKFHSLECICPKDIPV------------CRCGKKKELNIITKKPITPSKEEIE 291
Query: 525 G 525
Sbjct: 292 S 292
>gi|120555610|ref|YP_959961.1| hypothetical protein Maqu_2699 [Marinobacter aquaeolei VT8]
gi|120325459|gb|ABM19774.1| protein of unknown function DUF34 [Marinobacter aquaeolei VT8]
Length = 284
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 141/217 (64%), Gaps = 10/217 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + ++DYCPNGLQVEG + +VTGVTAS LI AV NAD ILVHHGYFWKGE+
Sbjct: 52 LQPENFQDYCPNGLQVEGNEQVTTLVTGVTASQALIDAAVAQNADMILVHHGYFWKGEDQ 111
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+KK R++QL+ N INL AYHLPLD HP+ GNN QLA++L R + W G
Sbjct: 112 AIRGMKKNRIKQLLDNDINLVAYHLPLDDHPEYGNNRQLAEVLGIQNPRPLG--GLVWQG 169
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ + ++++ + R + ++P+ +G KI + WCTGAAQ + A+
Sbjct: 170 EL--------PEPLSVEKFELEMARALHRQPLHVGGGADKIKTVAWCTGAAQGFINVALE 221
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AYISGEISE T + +RE G+ YFAAGHHATERY
Sbjct: 222 AGVDAYISGEISEPTTHTARECGIHYFAAGHHATERY 258
>gi|387814983|ref|YP_005430470.1| hypothetical protein MARHY2583 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381340000|emb|CCG96047.1| conserved hypothetical protein [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 247
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 143/217 (65%), Gaps = 10/217 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++DY PNGLQVEG+ ++ VIVTGVTAS LI AV+ NAD ILVHHGYFWKGE+
Sbjct: 15 LQPDNFQDYAPNGLQVEGKESVGVIVTGVTASQALIDAAVEQNADMILVHHGYFWKGEDQ 74
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+KK R++QL+ N INL AYHLPLD HP+ GNN QLA++L R + W G
Sbjct: 75 AIRGMKKNRIKQLLDNDINLVAYHLPLDDHPEYGNNRQLAEVLGIQNPRPLG--GLVWQG 132
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ + ++++ + R + ++P+ +G KI + WCTGAAQ + A+
Sbjct: 133 EL--------PEPLSVEKFELEMARALHRQPLHVGAGADKIKTVAWCTGAAQGFINVALE 184
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV AYISGEISE T + +RE G+ YFAAGHHATERY
Sbjct: 185 AGVDAYISGEISEPTTHTARECGIHYFAAGHHATERY 221
>gi|304310292|ref|YP_003809890.1| hypothetical protein HDN1F_06460 [gamma proteobacterium HdN1]
gi|301796025|emb|CBL44229.1| Protein of unknown function DUF34 [gamma proteobacterium HdN1]
Length = 252
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 152/224 (67%), Gaps = 13/224 (5%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
++ L ++++DYCPNGLQVEGR I IVTGVTA DLI A + ADAILVHHGYFW+
Sbjct: 12 RRLLEPEQFKDYCPNGLQVEGRDEIEKIVTGVTACRDLILAAREKGADAILVHHGYFWRN 71
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNN-- 622
EN + G+K +R+ L+ ++INL+AYHLPLD HP+LGNNAQLAK L N
Sbjct: 72 ENPCLTGMKYERIRLLMESQINLFAYHLPLDAHPELGNNAQLAKRLGVQVEGGLEPRNER 131
Query: 623 -IGWIGKIIN-LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQN 680
+G +G++ + +K +F +I I +++ +KP+ I +K I + WCTG AQN
Sbjct: 132 SVGNVGRLASPIKGQDFARI---------IEQRLKRKPLHIAGTDKLIRRVAWCTGGAQN 182
Query: 681 LLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+ A++ GV A+I+GE SE TV+I+RE+G+ +FAAGHHATERY
Sbjct: 183 YIDLALDAGVDAFITGEASEQTVHIAREAGIHFFAAGHHATERY 226
>gi|297537511|ref|YP_003673280.1| hypothetical protein M301_0316 [Methylotenera versatilis 301]
gi|297256858|gb|ADI28703.1| protein of unknown function DUF34 [Methylotenera versatilis 301]
Length = 249
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 145/220 (65%), Gaps = 8/220 (3%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
++ + +++++DYCPNGLQVEGRS +N IVTGVTASL L++ A NAD ILVHHGYFW+
Sbjct: 12 QELMQVERFKDYCPNGLQVEGRSEVNKIVTGVTASLALLEAAKQANADLILVHHGYFWRN 71
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIG 624
E+ +VGIK+ RL L+ N +NL AYHLPLD H + GNN QL ++L S + ++ +
Sbjct: 72 EDPRVVGIKRNRLAFLLKNDLNLMAYHLPLDAHAEFGNNVQLGQVLGISSSGFAGESKLM 131
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
G+++ K T+ I + + P+VIGD K + ++ WCTGAAQ +
Sbjct: 132 AYGELV--------KPTTLAAFAAQIESTLQRAPLVIGDPQKIVQKVAWCTGAAQGYIDT 183
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AI GV YISGEISE T + S ESGV+Y +AGHH TERY
Sbjct: 184 AIELGVDVYISGEISEQTTHQSIESGVSYISAGHHVTERY 223
>gi|134294531|ref|YP_001118266.1| hypothetical protein Bcep1808_0419 [Burkholderia vietnamiensis G4]
gi|134137688|gb|ABO53431.1| protein of unknown function DUF34 [Burkholderia vietnamiensis G4]
Length = 248
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ L++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVALLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP GNNAQL + L +RF +GW+
Sbjct: 74 QITGRKYRRLKLLLANDLNLFAFHLPLDAHPLFGNNAQLGEKLGLIGDQRFGDGELGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + +G+ P+V+GD + ++ + WCTG AQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVENTLGRTPLVLGDSDMQVRRVAWCTGGAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SEST + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSESTTHAAAESGVAFVAAGHHATERY 222
>gi|307544543|ref|YP_003897022.1| S-adenosyl-methyltransferase MraW [Halomonas elongata DSM 2581]
gi|307216567|emb|CBV41837.1| S-adenosyl-methyltransferase MraW [Halomonas elongata DSM 2581]
Length = 318
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 169/262 (64%), Gaps = 2/262 (0%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD 303
+G Y+D TFG+GGHS ILERL +GRL+AID+D +++ I D+RF+ F L
Sbjct: 32 SGRYLDGTFGRGGHSRAILERLSPQGRLLAIDRDPQAIQEAAAIEDARFAFERGDFARLG 91
Query: 304 IILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANA 362
+ +++ K+DGIL D+G+SS Q+++ RGFSFL DGPLDMRMD G SA+ W+A A
Sbjct: 92 DFARAHDLHGKLDGILLDVGVSSPQLDDPERGFSFLRDGPLDMRMDPEHGESAAAWIARA 151
Query: 363 TEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATR 422
E I +V + YGEERFA+++A+ IV R TRT L E+I + ++ K+PATR
Sbjct: 152 DEGEIARVFKTYGEERFARRLARAIVARRGERAFTRTADLAEVIKAAHPAWEKGKHPATR 211
Query: 423 TFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTK-IPHI 481
FQA+RI +N EL+ L +AL+ + L G +VVISFHSLEDR VK FI + + H+
Sbjct: 212 AFQALRIQVNGELEQLDLALEAALEALAPGGHLVVISFHSLEDRRVKRFIRDHVRGDTHL 271
Query: 482 DRRLPIYNYLFEPKMKFLARCK 503
R +P+ + + +++ L + +
Sbjct: 272 PRGIPLRDDQIQRRLEALGKAR 293
>gi|114321350|ref|YP_743033.1| S-adenosyl-methyltransferase MraW [Alkalilimnicola ehrlichii
MLHE-1]
gi|123127253|sp|Q0A6J4.1|RSMH_ALHEH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|114227744|gb|ABI57543.1| S-adenosyl-methyltransferase MraW [Alkalilimnicola ehrlichii
MLHE-1]
Length = 317
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 175/281 (62%), Gaps = 8/281 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L+EA++ L I R +G+Y+D TFG+GGH+ IL RLG +GRL +D+D E++++
Sbjct: 14 VLLDEALDALAI---RPHGVYVDGTFGRGGHAAGILARLGPEGRLWLVDRDPEAIAVARA 70
Query: 287 I--TDSRFSIIHNCFTELDIILKKYNI-KKIDGILFDLGISSNQINNELRGFSFLLDGPL 343
D R +I H F EL L+ + ++DG+L DLG+SS Q+++ RGFSF+ +GPL
Sbjct: 71 RHGDDPRCTIAHGRFDELPGRLEAAGLLHRVDGLLLDLGVSSPQLDSAERGFSFMREGPL 130
Query: 344 DMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTK-QL 402
DMRMD +RG++A +WL E + + ++DYGEER +++IA+ ++ R + T L
Sbjct: 131 DMRMDTSRGVTAREWLEQVDEKTLSRALRDYGEERHSRRIARALIRAREDGALPETTGAL 190
Query: 403 VEIILKSIRGNKRY-KNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461
+I +++ G K+PATR+FQA+RI IN EL+ L L+ L GR+VVISFH
Sbjct: 191 ARLIAENVPGRPEPGKHPATRSFQALRIAINGELEALDALLERICDLLAPGGRLVVISFH 250
Query: 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
SLEDR VK +I + + + +P+ +P+++ + R
Sbjct: 251 SLEDRRVKRYIRKQSTVGDLPPSVPVAPEALQPRLRSVGRA 291
>gi|410631925|ref|ZP_11342596.1| hypothetical protein GARC_2497 [Glaciecola arctica BSs20135]
gi|410148461|dbj|GAC19463.1| hypothetical protein GARC_2497 [Glaciecola arctica BSs20135]
Length = 253
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +K +DYCPNGLQVEG+ + IVTGVTAS LI AV ++ADAILVHHGYFWKGE+
Sbjct: 16 LTPEKVKDYCPNGLQVEGKKKVTKIVTGVTASQALIDHAVSISADAILVHHGYFWKGESP 75
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+K+KR++ L+ + INLYAYHLPLD+HP LGNNAQLAK+L + +NN +
Sbjct: 76 CITGMKRKRIQTLLQHDINLYAYHLPLDIHPTLGNNAQLAKLLGITDISPLEENNPQSV- 134
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ + F++ I+ +L +T K+ K P+ + I + WCTG Q + A
Sbjct: 135 ----VMQGRFERGISATELTQLLTTKLSKSPLHEAAASSNIETVAWCTGGGQGYIELAAE 190
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
+G+ AYI+GE+SE T++ +RE + ++AAGHHATERY
Sbjct: 191 KGIDAYITGEVSEQTIHTAREMNIHFYAAGHHATERY 227
>gi|254426844|ref|ZP_05040551.1| conserved hypothetical protein TIGR00486 [Alcanivorax sp. DG881]
gi|196193013|gb|EDX87972.1| conserved hypothetical protein TIGR00486 [Alcanivorax sp. DG881]
Length = 268
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 144/222 (64%), Gaps = 10/222 (4%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
++L +++D+CPNGLQVEGR I+ +V+GVTA LI A+ ADAILVHHGYFWKG
Sbjct: 29 DQELATDRFQDFCPNGLQVEGREQIHRVVSGVTACQALIDAAIVEEADAILVHHGYFWKG 88
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF--SKNN 622
E+ + G+KK+RL+ L+ + INL+AYHLPLD HP LGNNAQLA L S
Sbjct: 89 ESQQVRGMKKQRLQTLLRHDINLFAYHLPLDAHPTLGNNAQLALRLGLITEGGLDDSPRP 148
Query: 623 IGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLL 682
IG +G++ ++ + H+ +G+ P+ IGD +I +GWCTG AQ +
Sbjct: 149 IGNVGRL--------DSPMSASEFAAHVEAVLGRTPLHIGDPGDEIETVGWCTGGAQGFI 200
Query: 683 TDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
A +GV AY+SGEISE T + +RE+G+ YFA GHHATERY
Sbjct: 201 EKAQAKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERY 242
>gi|419797184|ref|ZP_14322681.1| dinuclear metal center protein, YbgI family [Neisseria sicca VK64]
gi|385698600|gb|EIG28952.1| dinuclear metal center protein, YbgI family [Neisseria sicca VK64]
Length = 249
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 145/226 (64%), Gaps = 10/226 (4%)
Query: 499 LARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHH 558
LA C + L + ++DY PNGLQVEGR+ + I T VTAS + A + AD +LVHH
Sbjct: 8 LAWCD--EVLQVGMFKDYAPNGLQVEGRAEVGKIATSVTASKAAVDFAAEQGADMLLVHH 65
Query: 559 GYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF 618
G FWK E I G KK R+E L+ ++IN+ YHLPLD HP LGNNAQLA L + RRF
Sbjct: 66 GMFWKSEPVTITGWKKVRIETLLQHQINMAGYHLPLDAHPVLGNNAQLADKLGWEVERRF 125
Query: 619 SKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA 678
+ N+ IG++ K T+ + HI +G++P+ +GD++++I I WCTG A
Sbjct: 126 GEQNLLNIGRL--------KTPQTLAEWLQHIAATLGRQPVAVGDMSREIKRIAWCTGGA 177
Query: 679 QNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
Q I+EGV AY++GEISES +++ E+GVA+ +AGHHATERY
Sbjct: 178 QGFFQTTIDEGVDAYLTGEISESQFHLANETGVAFVSAGHHATERY 223
>gi|350564691|ref|ZP_08933508.1| S-adenosyl-methyltransferase MraW [Thioalkalimicrobium aerophilum
AL3]
gi|349777710|gb|EGZ32073.1| S-adenosyl-methyltransferase MraW [Thioalkalimicrobium aerophilum
AL3]
Length = 309
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 170/278 (61%), Gaps = 5/278 (1%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN- 285
+ L+E++ L I + +G Y+D TFG+GGHS +L +LG GRL+A D+D E+V+
Sbjct: 10 VLLSESLVGLAI---KPDGFYVDGTFGRGGHSRALLAQLGPMGRLVAFDQDPEAVAYAKA 66
Query: 286 KITDSRFSIIHNCFTELDIILKKYN-IKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
I D RF I+++ F +L + + K+DGIL DLG+SS Q++ RGFSF+ +GPLD
Sbjct: 67 SIDDPRFEIVYSSFADLLSVADRAGWTGKVDGILLDLGVSSPQLDEAERGFSFMREGPLD 126
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRM+ G+SA WL E + +V++ +GEERFA KIA+ + H + TK L E
Sbjct: 127 MRMNPAVGLSAKDWLIAVEEEQLARVLKHFGEERFAYKIARAVSHDAKAGLLNTTKDLAE 186
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ + + ++K+PATRTFQAIRI +N EL L L L +GR+ VISFHSLE
Sbjct: 187 LVARVVPKKDKHKHPATRTFQAIRIAVNGELDALKQVLDASLAVLAPQGRLSVISFHSLE 246
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARC 502
DRIVK F+ +++ + LP+ E ++K + +
Sbjct: 247 DRIVKQFMRDQSQVKDLFPDLPVLVATTEARLKRIGKA 284
>gi|312794111|ref|YP_004027034.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181251|gb|ADQ41421.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 307
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++++L I N +GIY+DATFG GGHS +ILE+L KG L+AIDKD E++ LG +
Sbjct: 7 VLLEESVSFL-ITNP--DGIYVDATFGLGGHSKRILEKLSNKGFLVAIDKDLEAIELGKR 63
Query: 287 ITD--SRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ I+H+ F+++D +L+ I+KIDGILFD G+SS Q++ + RGFS+ + LD
Sbjct: 64 RLEGYKNIKIVHSSFSKVDEVLESLGIEKIDGILFDFGVSSLQLDKQERGFSYSKEAFLD 123
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T ++A + ++ +++++I++YGEERFA++IAK IV R PI T +L
Sbjct: 124 MRMDTTSKLTAYDVINFYSQEDLERIIREYGEERFARRIAKAIVERRRNKPIETTTELSS 183
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + K +PA RTFQAIRI +N+EL+ + IAL+ + L GRI ISFHSLE
Sbjct: 184 LISSVVPKPKDGSHPAQRTFQAIRIEVNRELEEIKIALEKSLRFLKSGGRICAISFHSLE 243
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DRIVK F F++ + +P+ RC KK+L I + P+ ++E
Sbjct: 244 DRIVKEFFKFHSLECICPKDIPV------------CRCGKKKELEIITKKPIVPSKEEIE 291
>gi|407700056|ref|YP_006824843.1| NIF3 protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407249203|gb|AFT78388.1| NIF3 protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 253
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 147/217 (67%), Gaps = 5/217 (2%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L + + DYCPNGLQVEG S I +VTGVTAS L+ A++ ADA++VHHGYFWKGE+
Sbjct: 16 LRVSEISDYCPNGLQVEGASKIEKVVTGVTASQALLDAAIEAKADALIVHHGYFWKGESQ 75
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G+KK+RL+ L+ N INLYAYHLPLD+HP+ GNN QLA +L+ S ++ +G
Sbjct: 76 VIAGMKKRRLQTLLSNDINLYAYHLPLDVHPEFGNNRQLASLLDIQNVSAVS--DVKPVG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
++ + NF+ IT +L + + +G+ ++ G +K I + WCTG Q + A+
Sbjct: 134 VVM---QGNFEVEITGTELQAKLQQILGRDVLLEGPASKPISTLAWCTGGGQGFIEQAVE 190
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
GV A+I+GE+SE TV+ +RE G+ +FAAGHHATERY
Sbjct: 191 LGVDAFITGEVSEQTVHTAREMGITFFAAGHHATERY 227
>gi|302871361|ref|YP_003839997.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor obsidiansis
OB47]
gi|302574220|gb|ADL42011.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor obsidiansis
OB47]
Length = 307
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 176/283 (62%), Gaps = 14/283 (4%)
Query: 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITD--SRFSIIHNCFTE 301
+GIY+DATFG GGHS +ILE+L KG LIAID+D E++ LG + + I+H+ F++
Sbjct: 21 DGIYVDATFGLGGHSKRILEKLSNKGFLIAIDRDLEAIELGKRKLEVHKNVKIVHSSFSK 80
Query: 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLAN 361
LD +LK I+KIDGILFD G+SS Q++ + RGFS+ + LDMRMD T ++A +
Sbjct: 81 LDEVLKGLGIEKIDGILFDFGVSSLQLDKQERGFSYNQEAFLDMRMDTTSKLTAYDVVNF 140
Query: 362 ATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPAT 421
+E +++++I++YGEERFA++IAK IV RS PI T +L +I + K +PA
Sbjct: 141 YSEKDLERIIREYGEERFARRIAKAIVERRSKKPIETTTELSNLISSLVPRPKDGSHPAQ 200
Query: 422 RTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHI 481
RTFQAIRI +N EL + IAL+ + L GRI ISFHSLEDRIVK F F++
Sbjct: 201 RTFQAIRIEVNSELDEIKIALEKSLRFLRSGGRICAISFHSLEDRIVKEFFKFHSLECVC 260
Query: 482 DRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
+ +PI C KK+LNI + P+ ++E
Sbjct: 261 PKDIPI------------CVCGKKKELNIITKKPITPSKEEIE 291
>gi|221134636|ref|ZP_03560939.1| hypothetical protein GHTCC_06872 [Glaciecola sp. HTCC2999]
Length = 250
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 147/220 (66%), Gaps = 12/220 (5%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
LN +DYCPNGLQ++GR ++ I+TGVTAS LI TA+ +ADAILVHHGYFWKGE
Sbjct: 14 LNRDSIQDYCPNGLQIQGRRDVQKIITGVTASQALIDTAIAQHADAILVHHGYFWKGETP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWI- 626
NI +K+ R++ L+ + INLYAYHLPLD+HP+LGNNAQLA++L+ + T G +
Sbjct: 74 NITHMKQARIKALLSHDINLYAYHLPLDVHPELGNNAQLAQLLDINITGYLPVKPHGVLM 133
Query: 627 -GKIIN-LKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
G++ + + F ++ I ++ K PI++GD N+ I + WCTG Q L
Sbjct: 134 HGRLTAPMSAHAFAQL---------IDDQLDKAPIILGDTNQTIDTVAWCTGGGQGYLET 184
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
A G+ A+I+GE SE T +I+ E GV++FAAGHHATERY
Sbjct: 185 AAQAGIDAFITGEASEQTTHIANEYGVSFFAAGHHATERY 224
>gi|410693037|ref|YP_003623658.1| putative NGG1p interacting factor, ybgI [Thiomonas sp. 3As]
gi|294339461|emb|CAZ87820.1| putative NGG1p interacting factor, ybgI [Thiomonas sp. 3As]
Length = 247
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L+ ++ DYCPNGLQVEGR I IVTGVTASL LI+ A+ + ADA+LVHHGYFW+GE+
Sbjct: 14 LDCARFTDYCPNGLQVEGREEIARIVTGVTASLALIERAIALRADALLVHHGYFWRGEDP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I+ K+KRL L+ +NL+AYHLPLD H ++GNN LA+ L +S RF K +G +G
Sbjct: 74 RIIRQKRKRLGLLLAADLNLFAYHLPLDAHGEVGNNVMLARRLGWSVQGRFGKQQLGCLG 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
TI L + R +G+ P+V+G+ + + + WCTG AQ+ + DA
Sbjct: 134 SAPQ---------ATIGQLAQAVARDLGRTPLVVGEADAPVGTLAWCTGGAQDWIEDAWA 184
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATER 723
G ++SGEISE T + +RE G+ Y A GHHATER
Sbjct: 185 AGARTFVSGEISEPTAHFAREMGITYLACGHHATER 220
>gi|372268251|ref|ZP_09504299.1| S-adenosyl-methyltransferase MraW [Alteromonas sp. S89]
Length = 311
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 171/265 (64%), Gaps = 6/265 (2%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L EA++ L ++ +G YID TFG+GGHS +LE+LG G L+A+DKD ++++ +
Sbjct: 9 VLLREAVDALVVDP---DGFYIDGTFGRGGHSALVLEQLGGAGSLLAVDKDPQAIAYAGE 65
Query: 287 --ITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+SRF+I H F ++D ++ GIL DLG+SS Q++ RGFSF+ DGPLD
Sbjct: 66 RFAGESRFAIWHGSFADMDQAAAGRE-GQVSGILLDLGVSSPQLDQAERGFSFMQDGPLD 124
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD +RG+SA+ W+ +E + +V ++YGEERFA+++A I R+ P RT L E
Sbjct: 125 MRMDTSRGMSAADWVNTESEAEMARVFKEYGEERFARRMAAAIARRRAEKPFERTLDLAE 184
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
++ + ++ K+PATR FQAIRI+IN EL +L AL + L GR+V+ISFHSLE
Sbjct: 185 VVKAANPAWEKGKHPATRVFQAIRIHINGELDDLYQALDKSLQLLKPGGRLVIISFHSLE 244
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYN 489
DRIVK FI K P + R LP+ +
Sbjct: 245 DRIVKRFIREQEKGPQLPRGLPVMD 269
>gi|222528776|ref|YP_002572658.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor bescii DSM
6725]
gi|263446717|sp|B9MQ93.1|RSMH_ANATD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|222455623|gb|ACM59885.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor bescii DSM
6725]
Length = 307
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 188/301 (62%), Gaps = 17/301 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++++L I N +GIY+DATFG GGHS +ILE++ KG LIAID+D E++ LG +
Sbjct: 7 VLLEESVSFL-ITNP--DGIYVDATFGLGGHSKRILEKISNKGFLIAIDRDLEAIELGKR 63
Query: 287 ITDS--RFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
++ I+H+ F+++D +L+ I+KIDGILFD G+SS Q++ + RGFS+ + LD
Sbjct: 64 KLEAYKNVKIVHSSFSKVDELLECLGIEKIDGILFDFGVSSLQLDKQERGFSYNKEAFLD 123
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T ++A + ++ +++K+I++YGEERFA++IAK IV RS PI T +L
Sbjct: 124 MRMDTTSKLTAYDVVNFYSQEDLEKIIREYGEERFARRIAKAIVERRSKKPIETTTELSS 183
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + K +PA RTFQAIRI +N EL + IAL+ + L GRI ISFHSLE
Sbjct: 184 LISSLVPRPKDGSHPAQRTFQAIRIEVNGELDEIKIALEKSLRFLRSGGRICAISFHSLE 243
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DRIVK F F++ + +P+ RC KK+LNI + P+ ++E
Sbjct: 244 DRIVKEFFKFHSLECVCPKDIPV------------CRCGKKKELNIITKKPITPSKEEIE 291
Query: 525 G 525
Sbjct: 292 S 292
>gi|344996598|ref|YP_004798941.1| ribosomal RNA small subunit methyltransferase H
[Caldicellulosiruptor lactoaceticus 6A]
gi|343964817|gb|AEM73964.1| Ribosomal RNA small subunit methyltransferase H
[Caldicellulosiruptor lactoaceticus 6A]
Length = 307
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 187/300 (62%), Gaps = 17/300 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++++L I N +GIY+DATFG GGHS +ILE+L KG L+AIDKD E++ LG +
Sbjct: 7 VLLEESVSFL-ITNP--DGIYVDATFGLGGHSKRILEKLSNKGFLVAIDKDLEAIELGKR 63
Query: 287 ITD--SRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
+ I+H+ F+++D +L+ I+KIDGILFD G+SS Q++ + RGFS+ + LD
Sbjct: 64 RLEGYKNIKIVHSSFSKVDEVLESLGIEKIDGILFDFGVSSLQLDKQERGFSYSKEAFLD 123
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T ++A + ++ +++++I++YGEERFA++IAK IV R PI T +L
Sbjct: 124 MRMDTTSKLTAYDVINFYSQEDLERIIREYGEERFARRIAKAIVERRRNKPIETTTELSS 183
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + K +PA RTFQAIRI +N+EL+ + IAL+ + L GRI ISFHSLE
Sbjct: 184 LISSVVPKPKDGSHPAQRTFQAIRIEVNRELEEIKIALEKSLRFLKSGGRICAISFHSLE 243
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DRIVK F F++ + +P+ RC KK+L I + P+ ++E
Sbjct: 244 DRIVKGFFKFHSLECICPKDIPV------------CRCGKKKELEIITKKPIVPSKEEIE 291
>gi|390576745|ref|ZP_10256795.1| hypothetical protein WQE_49853 [Burkholderia terrae BS001]
gi|420247054|ref|ZP_14750473.1| dinuclear metal center protein, YbgI/SA1388 family [Burkholderia
sp. BT03]
gi|389931323|gb|EIM93401.1| hypothetical protein WQE_49853 [Burkholderia terrae BS001]
gi|398072490|gb|EJL63704.1| dinuclear metal center protein, YbgI/SA1388 family [Burkholderia
sp. BT03]
Length = 248
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 137/214 (64%), Gaps = 8/214 (3%)
Query: 511 KKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIV 570
+++DYCPNGLQVEGR + I TGVTASL ++ A++ ADA+LVHHGYFW+ E I
Sbjct: 17 SRFKDYCPNGLQVEGRRKVEKIATGVTASLAFLEAALEWGADAVLVHHGYFWRNEAPQIT 76
Query: 571 GIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKII 630
G K +RL+ L+ N +NL+A+HLPLD HP GNNAQL RF +N+IGW+ +
Sbjct: 77 GRKYQRLKALLANDLNLFAFHLPLDDHPVYGNNAQLGAKFGLIADGRFGENDIGWMSTL- 135
Query: 631 NLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGV 690
IT+ + + +G+ P+V GD +K + + WCTGAAQ AI+ G
Sbjct: 136 -------PMPITLAHFTAEVEQTLGRTPLVFGDPDKNLRRVAWCTGAAQGYFDAAIDAGA 188
Query: 691 TAYISGEISESTVYISRESGVAYFAAGHHATERY 724
Y++GEISE V+ + ESGVA+ +AGHHATERY
Sbjct: 189 DVYLTGEISEPIVHTAAESGVAFISAGHHATERY 222
>gi|421170194|ref|ZP_15628168.1| hypothetical protein PABE177_4953 [Pseudomonas aeruginosa ATCC
700888]
gi|404524267|gb|EKA34618.1| hypothetical protein PABE177_4953 [Pseudomonas aeruginosa ATCC
700888]
Length = 252
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
+ L+ + +DYCPNGLQVEGR + IV+GVTAS L+ V+ +AD +LVHHGYFWKG
Sbjct: 13 DRYLDAARIQDYCPNGLQVEGRPQVRRIVSGVTASQALLDAVVEADADVVLVHHGYFWKG 72
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIG 624
EN +VG+K++RL+ L+ N I+L AYHLPLD+HP++GNN QLA+ L F N
Sbjct: 73 ENPCVVGMKQRRLKTLLNNDISLLAYHLPLDLHPEVGNNVQLARQLGFEVEGPLEPGNPR 132
Query: 625 WIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTD 684
I + +L + + D H+ +G++P+++ D + I I WCTG AQ +
Sbjct: 133 SIVLLGSL-----AEPMQPADFARHVRDALGREPLLV-DAGQPIRRIAWCTGGAQGYIDQ 186
Query: 685 AINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AI GV AY++GE+SE TV+ +RE+G+++ AAGHHATERY
Sbjct: 187 AIAAGVDAYLTGEVSEQTVHSARENGISFIAAGHHATERY 226
>gi|254253436|ref|ZP_04946754.1| hypothetical protein BDAG_02699 [Burkholderia dolosa AUO158]
gi|124896045|gb|EAY69925.1| hypothetical protein BDAG_02699 [Burkholderia dolosa AUO158]
Length = 248
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 139/217 (64%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS ++ A++ ADA+LVHHGYFW+ E
Sbjct: 14 LETARFKDYCPNGLQVEGRRKIEKIATGVTASAAFLEAALEWGADAVLVHHGYFWRNEAP 73
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
IVG K +RL+ L+ N +NL+A+HLPLD HP+LGNNAQL L RF +GW+
Sbjct: 74 QIVGRKYQRLKLLLANDLNLFAFHLPLDAHPELGNNAQLGAKLGLIGESRFGDGELGWMA 133
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + +G+ P+V+GD + ++ I WCTGAAQ+ AI+
Sbjct: 134 TL--------PMPVTLEHFVAKVENTLGRTPLVLGDPDMQLRRIAWCTGAAQSYFDAAID 185
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SE + + ESGVA+ AAGHHATERY
Sbjct: 186 AGADVFLTGEVSEPVTHAAAESGVAFVAAGHHATERY 222
>gi|312128123|ref|YP_003992997.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
hydrothermalis 108]
gi|311778142|gb|ADQ07628.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
hydrothermalis 108]
Length = 307
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 186/300 (62%), Gaps = 17/300 (5%)
Query: 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK 286
+ L E++++L I N +GIY+DATFG GGHS +ILE+L KG L+AIDKD E++ LG +
Sbjct: 7 VLLEESVSFL-ITNP--DGIYVDATFGLGGHSKRILEKLSNKGFLVAIDKDLEAIELGKR 63
Query: 287 ITDS--RFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLD 344
++ I+H+ F+++D +L+ I KIDGILFD G+SS Q++ + RGFS+ + LD
Sbjct: 64 RLEAYKNIKIVHSSFSKVDEVLESLGIAKIDGILFDFGVSSLQLDKQERGFSYSKEAFLD 123
Query: 345 MRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404
MRMD T ++A + ++ +++++I++YGEERFA++IAK IV RS PI T L
Sbjct: 124 MRMDTTSKLTAYDVVNFYSQEDLERIIREYGEERFARRIAKAIVERRSKKPIETTTDLSS 183
Query: 405 IILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464
+I + K +PA RTFQAIRI +N+EL+ + +AL+ L GRI ISFHSLE
Sbjct: 184 LISSLVPKPKDGSHPAQRTFQAIRIEVNRELEEIKVALEKSLGFLKSGGRICAISFHSLE 243
Query: 465 DRIVKNFINFNTKIPHIDRRLPIYNYLFEPKMKFLARCKPKKKLNIKKYEDYCPNGLQVE 524
DRIVK F F++ + +P+ RC KK+L I + P+ ++E
Sbjct: 244 DRIVKEFFKFHSLECICPKDIPV------------CRCGKKKQLEIITKKPIVPSKEEIE 291
>gi|349608774|ref|ZP_08888194.1| hypothetical protein HMPREF1028_00169 [Neisseria sp. GT4A_CT1]
gi|348610442|gb|EGY60134.1| hypothetical protein HMPREF1028_00169 [Neisseria sp. GT4A_CT1]
Length = 249
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 145/226 (64%), Gaps = 10/226 (4%)
Query: 499 LARCKPKKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHH 558
LA C + L + ++DY PNGLQVEGR+ + I T VTAS + A + AD +LVHH
Sbjct: 8 LAWCD--EVLQVGMFKDYAPNGLQVEGRAEVGKIATSVTASKAAVDFAAEQGADMLLVHH 65
Query: 559 GYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF 618
G FWK E I G KK R+E L+ ++IN+ YHLPLD HP LGNNAQLA L + RRF
Sbjct: 66 GMFWKSEPVTITGWKKVRIETLLQHQINMAGYHLPLDAHPVLGNNAQLADKLGWEVERRF 125
Query: 619 SKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA 678
+ N+ IG++ K T+ + HI +G++P+ +GD++++I I WCTG A
Sbjct: 126 GEQNLLNIGRL--------KTPQTLAEWLQHIAAALGRQPVAVGDMSREIKRIAWCTGGA 177
Query: 679 QNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
Q I+EGV AY++GEISE+ +++ E+GVA+ +AGHHATERY
Sbjct: 178 QGFFQTTIDEGVDAYLTGEISEAQFHLANETGVAFVSAGHHATERY 223
>gi|387901118|ref|YP_006331457.1| hypothetical protein MYA_0358 [Burkholderia sp. KJ006]
gi|387576010|gb|AFJ84726.1| hypothetical protein MYA_0358 [Burkholderia sp. KJ006]
Length = 241
Score = 221 bits (563), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L +++DYCPNGLQVEGR I I TGVTAS+ L++ A++ ADA+LVHHGYFW+ E
Sbjct: 7 LETARFKDYCPNGLQVEGRRKIEKIATGVTASVALLEAALEWGADAVLVHHGYFWRNEAP 66
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
I G K +RL+ L+ N +NL+A+HLPLD HP GNNAQL + L +RF +GW+
Sbjct: 67 QITGRKYRRLKLLLANDLNLFAFHLPLDAHPLFGNNAQLGEKLGLIGDQRFGDGELGWMA 126
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
+ +T++ + +G+ P+V+GD + ++ + WCTG AQ+ AI+
Sbjct: 127 TL--------PMPVTLEHFVAKVENTLGRTPLVLGDSDMQVRRVAWCTGGAQSYFDAAID 178
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
G +++GE+SEST + + ESGVA+ AAGHHATERY
Sbjct: 179 AGADVFLTGEVSESTTHAAAESGVAFVAAGHHATERY 215
>gi|332286362|ref|YP_004418273.1| hypothetical protein PT7_3109 [Pusillimonas sp. T7-7]
gi|330430315|gb|AEC21649.1| hypothetical protein PT7_3109 [Pusillimonas sp. T7-7]
Length = 258
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 155/227 (68%), Gaps = 15/227 (6%)
Query: 505 KKKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKG 564
+ L ++++DYCPNGLQVEG+++I+ I+TGVTA+ L++TA++ NADA+LVHHG+FWK
Sbjct: 14 ENTLQAQRFKDYCPNGLQVEGKTSISHIITGVTATQALLETAIERNADAVLVHHGWFWKN 73
Query: 565 ENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSC-------TRR 617
E+ I GIK++RL + +K+N++AYHLPLD HP LGNNAQL ++L F R
Sbjct: 74 ESPVIRGIKRERLALALGHKLNVFAYHLPLDAHPTLGNNAQLGRVLGFEPELDEDGNPLR 133
Query: 618 FSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGA 677
+ + W+G+I K T++ L + + ++P+++G+L + I+ I WCTG
Sbjct: 134 CGPDGLIWLGRIPGGK--------TLEQLGESLCNSLQRQPLLVGNLQQDIHRIAWCTGG 185
Query: 678 AQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
AQ ++ A++ GV AY++GE SE T ++++E+ A+ AGHHATERY
Sbjct: 186 AQGMMQAAVDAGVDAYLTGEASEPTYHLAQETDTAFIGAGHHATERY 232
>gi|298370315|ref|ZP_06981631.1| NIF3 (NGG1p interacting factor 3) family protein [Neisseria sp.
oral taxon 014 str. F0314]
gi|298281775|gb|EFI23264.1| NIF3 (NGG1p interacting factor 3) family protein [Neisseria sp.
oral taxon 014 str. F0314]
Length = 249
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 144/219 (65%), Gaps = 8/219 (3%)
Query: 506 KKLNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGE 565
+ L ++DY PNGLQVEG++ I IVT VTAS + A AD +LVHHG FWK E
Sbjct: 13 QTLQTDVFKDYAPNGLQVEGKAEIGKIVTSVTASKAAVDFAAAQQADMLLVHHGMFWKSE 72
Query: 566 NSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGW 625
+ G KK R+E L+ ++INL YHLPLD HP+LGNNAQLAK+L++ ++F + N
Sbjct: 73 PVTVTGWKKTRIETLLRHQINLAGYHLPLDAHPELGNNAQLAKLLDWELEKQFGEQN--- 129
Query: 626 IGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDA 685
++N R KK ++ L I K+ +KP+V+GD ++I I WCTG AQ A
Sbjct: 130 ---LLNAGR--LKKTQSLAQLAQSIELKLERKPVVVGDAGREIRRIAWCTGGAQGFFQTA 184
Query: 686 INEGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
I+EGV AY++GEISE+ +++ E+GVA+ +AGHHATERY
Sbjct: 185 IDEGVDAYVTGEISEAQYHLANETGVAFISAGHHATERY 223
>gi|269214615|ref|ZP_05986937.2| putative NIF3 family protein family protein [Neisseria lactamica
ATCC 23970]
gi|269209417|gb|EEZ75872.1| putative NIF3 family protein family protein [Neisseria lactamica
ATCC 23970]
Length = 260
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 143/217 (65%), Gaps = 8/217 (3%)
Query: 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENS 567
L ++DY PNGLQVEG++ I I T VTAS I AV+ AD +LVHHG FWK E
Sbjct: 26 LQTALFKDYAPNGLQVEGKAYIGKIATSVTASKAAIDFAVEQKADLLLVHHGMFWKSEPP 85
Query: 568 NIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIG 627
+ G KK+R+ L+ N IN+ AYHLPLD HP+LGNNAQLA+ L F+ RRF + N+
Sbjct: 86 TVTGWKKERIAALLDNDINMAAYHLPLDAHPELGNNAQLAEKLGFTVERRFGEQNL---- 141
Query: 628 KIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAIN 687
L + K++ T+ L HI + +KP V+GDLN++I ++ WC+G AQ AI+
Sbjct: 142 ----LNSGSLKQVRTLGALAAHIEAVLQRKPAVVGDLNREIRKVAWCSGGAQGFFQTAID 197
Query: 688 EGVTAYISGEISESTVYISRESGVAYFAAGHHATERY 724
EGV Y++GEISE+ +++ E+G A+ +AGHHATERY
Sbjct: 198 EGVDLYLTGEISEAQYHLANETGTAFISAGHHATERY 234
>gi|145588347|ref|YP_001154944.1| S-adenosyl-methyltransferase MraW [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|262824872|sp|A4SV66.1|RSMH_POLSQ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145046753|gb|ABP33380.1| S-adenosyl-methyltransferase MraW [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 316
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 171/262 (65%), Gaps = 8/262 (3%)
Query: 246 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII 305
+ ID TFG+GGH+ +L+ L R+I+ DKD +++S+ +I D RF+I+H+ F +D
Sbjct: 33 VVIDGTFGRGGHTQALLKSLEMSARVISFDKDLDAISVAQQIQDPRFTIVHDSFAHMD-- 90
Query: 306 LKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEF 365
+ + +DGIL DLGISS Q++ RGFSF +GPLDMRM+ +G++A++WL A +
Sbjct: 91 -QYAQAESVDGILLDLGISSPQVDEAHRGFSFRREGPLDMRMNTDQGLTAAEWLEQAPQE 149
Query: 366 NIKKVIQDYGEERFAKKIAKEIVHYRS--ITPITRTKQLVEIILKSIRGNKRYKNPATRT 423
I +VI+ YGEERFA +IAK IV R ++P T T +L ++ +R + ++PATRT
Sbjct: 150 EITRVIKTYGEERFAFQIAKAIVAKREEGLSPKT-TTELASLVASVVRTREAGQDPATRT 208
Query: 424 FQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFNTKIPHIDR 483
FQA+RI+IN+EL++L + LK K L R+ VISFHSLEDRIVK F + K+ I R
Sbjct: 209 FQALRIFINRELEDLELGLKAALKLLKPGARLAVISFHSLEDRIVKQFFQAHAKV-EIPR 267
Query: 484 RLPIYNY-LFEPKMKFLARCKP 504
LP+ L + ++ + R KP
Sbjct: 268 GLPVREKDLPQSALEIIGRVKP 289
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.141 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,942,684,321
Number of Sequences: 23463169
Number of extensions: 459064055
Number of successful extensions: 1641296
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7450
Number of HSP's successfully gapped in prelim test: 1531
Number of HSP's that attempted gapping in prelim test: 1618547
Number of HSP's gapped (non-prelim): 11006
length of query: 733
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 583
effective length of database: 8,839,720,017
effective search space: 5153556769911
effective search space used: 5153556769911
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 81 (35.8 bits)