Query psy2380
Match_columns 733
No_of_seqs 508 out of 3644
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 23:33:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2380.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2380hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tka_A Ribosomal RNA small sub 100.0 8.4E-98 3E-102 788.5 24.9 280 223-506 40-325 (347)
2 1wg8_A Predicted S-adenosylmet 100.0 3.3E-89 1.1E-93 709.6 24.3 242 225-474 7-248 (285)
3 1m6y_A S-adenosyl-methyltransf 100.0 6.3E-68 2.2E-72 565.0 25.0 243 225-474 11-260 (301)
4 1nmo_A Hypothetical protein YB 100.0 1.1E-55 3.9E-60 457.6 19.2 214 508-732 14-229 (247)
5 2fyw_A Conserved hypothetical 100.0 1.2E-55 4.1E-60 462.7 18.8 217 500-732 13-240 (267)
6 2nyd_A UPF0135 protein SA1388; 100.0 5.3E-55 1.8E-59 473.5 18.7 217 500-732 15-343 (370)
7 2yyb_A Hypothetical protein TT 100.0 3.6E-55 1.2E-59 452.2 16.2 212 500-732 11-224 (242)
8 2gx8_A NIF3-related protein; s 100.0 9.5E-55 3.2E-59 474.4 17.7 218 500-732 39-370 (397)
9 3rxy_A NIF3 protein; structura 100.0 2.7E-30 9.4E-35 261.2 14.1 194 514-732 24-264 (278)
10 3mkt_A Multi antimicrobial ext 99.0 5.9E-10 2E-14 123.7 11.1 122 2-124 196-318 (460)
11 3eey_A Putative rRNA methylase 98.6 7.7E-08 2.6E-12 94.6 10.1 78 242-323 21-103 (197)
12 3mkt_A Multi antimicrobial ext 98.5 1.5E-06 5.2E-11 96.1 16.3 142 40-182 9-253 (460)
13 3mti_A RRNA methylase; SAM-dep 98.3 2.4E-06 8.1E-11 82.9 10.3 75 242-323 21-99 (185)
14 3mb5_A SAM-dependent methyltra 98.1 1.6E-05 5.6E-10 81.1 11.6 84 229-321 82-170 (255)
15 1dus_A MJ0882; hypothetical pr 98.0 6.2E-05 2.1E-09 72.6 13.3 82 229-322 41-128 (194)
16 3m4x_A NOL1/NOP2/SUN family pr 98.0 4.2E-05 1.5E-09 85.4 13.2 80 242-325 104-187 (456)
17 3duw_A OMT, O-methyltransferas 98.0 5.2E-05 1.8E-09 75.7 12.5 80 242-321 57-141 (223)
18 2frx_A Hypothetical protein YE 98.0 8.1E-05 2.8E-09 83.8 15.3 80 243-326 117-200 (479)
19 2b9e_A NOL1/NOP2/SUN domain fa 97.9 1.3E-05 4.5E-10 85.2 7.8 83 242-326 101-187 (309)
20 1sqg_A SUN protein, FMU protei 97.9 9.3E-05 3.2E-09 82.2 14.3 86 234-326 240-328 (429)
21 3e05_A Precorrin-6Y C5,15-meth 97.8 0.00016 5.5E-09 71.1 13.1 83 230-321 30-116 (204)
22 2yxl_A PH0851 protein, 450AA l 97.8 4.6E-05 1.6E-09 85.2 10.1 82 242-326 258-343 (450)
23 3hm2_A Precorrin-6Y C5,15-meth 97.8 0.0002 6.9E-09 68.3 12.2 82 229-319 14-100 (178)
24 1ej0_A FTSJ; methyltransferase 97.7 0.00035 1.2E-08 65.9 12.9 86 230-324 11-99 (180)
25 1o54_A SAM-dependent O-methylt 97.7 0.00019 6.4E-09 74.5 11.7 84 229-321 101-189 (277)
26 3dtn_A Putative methyltransfer 97.7 0.00017 5.7E-09 72.4 10.5 83 230-321 33-117 (234)
27 2gpy_A O-methyltransferase; st 97.6 0.00018 6.3E-09 72.3 10.5 78 242-322 53-135 (233)
28 1l3i_A Precorrin-6Y methyltran 97.5 0.00052 1.8E-08 65.8 11.9 80 230-320 23-107 (192)
29 3tma_A Methyltransferase; thum 97.5 0.00032 1.1E-08 75.5 11.3 84 232-323 195-282 (354)
30 1yb2_A Hypothetical protein TA 97.5 0.00035 1.2E-08 72.4 10.9 82 230-320 100-186 (275)
31 3evz_A Methyltransferase; NYSG 97.5 0.00039 1.3E-08 69.5 10.7 76 242-323 54-133 (230)
32 3dou_A Ribosomal RNA large sub 97.5 0.0012 4.2E-08 64.7 13.9 80 230-321 14-99 (191)
33 2frn_A Hypothetical protein PH 97.5 0.00019 6.4E-09 74.8 8.2 72 242-321 124-200 (278)
34 1jsx_A Glucose-inhibited divis 97.5 0.00042 1.4E-08 68.0 10.1 84 229-319 51-138 (207)
35 1o9g_A RRNA methyltransferase; 97.5 0.00051 1.7E-08 69.9 11.0 44 242-285 50-94 (250)
36 3grz_A L11 mtase, ribosomal pr 97.5 0.00057 2E-08 67.1 11.0 71 242-321 59-133 (205)
37 1i1n_A Protein-L-isoaspartate 97.4 0.00021 7.4E-09 71.3 7.6 92 226-323 61-161 (226)
38 2r6z_A UPF0341 protein in RSP 97.3 0.00026 8.9E-09 73.1 6.8 79 242-324 82-172 (258)
39 3hnr_A Probable methyltransfer 97.3 0.0014 4.9E-08 64.7 11.6 78 230-320 35-113 (220)
40 3ajd_A Putative methyltransfer 97.3 0.00061 2.1E-08 70.8 9.1 84 242-326 82-169 (274)
41 1ixk_A Methyltransferase; open 97.3 0.00068 2.3E-08 72.0 9.5 80 242-326 117-200 (315)
42 2plw_A Ribosomal RNA methyltra 97.2 0.0042 1.4E-07 60.4 14.4 54 242-302 21-75 (201)
43 4df3_A Fibrillarin-like rRNA/T 97.2 0.00097 3.3E-08 67.8 9.1 78 242-321 76-155 (233)
44 3u81_A Catechol O-methyltransf 97.2 0.00056 1.9E-08 68.3 7.0 80 242-321 57-142 (221)
45 2b25_A Hypothetical protein; s 97.1 0.00088 3E-08 71.5 8.9 90 226-321 91-195 (336)
46 3tr6_A O-methyltransferase; ce 97.1 0.001 3.4E-08 66.2 8.7 81 242-322 63-149 (225)
47 2oyr_A UPF0341 protein YHIQ; a 97.1 0.00021 7.3E-09 73.8 3.8 87 229-325 75-176 (258)
48 1g8a_A Fibrillarin-like PRE-rR 97.1 0.0013 4.5E-08 65.6 9.0 78 242-321 72-151 (227)
49 3ntv_A MW1564 protein; rossman 97.1 0.0012 4.1E-08 66.5 8.7 75 242-321 70-150 (232)
50 2pwy_A TRNA (adenine-N(1)-)-me 97.0 0.0023 7.7E-08 64.9 10.5 86 228-321 84-174 (258)
51 3m6w_A RRNA methylase; rRNA me 97.0 0.00092 3.1E-08 74.7 8.0 80 242-325 100-182 (464)
52 3m70_A Tellurite resistance pr 97.0 0.0024 8.3E-08 66.0 10.5 81 229-321 109-192 (286)
53 2xvm_A Tellurite resistance pr 97.0 0.0021 7.1E-08 62.2 9.3 79 230-320 22-104 (199)
54 2f8l_A Hypothetical protein LM 97.0 0.0023 8E-08 68.5 10.2 76 242-323 129-211 (344)
55 2qm3_A Predicted methyltransfe 97.0 0.0041 1.4E-07 67.5 12.2 73 243-321 172-249 (373)
56 3dr5_A Putative O-methyltransf 97.0 0.0016 5.3E-08 65.5 8.2 77 242-321 55-137 (221)
57 3c3y_A Pfomt, O-methyltransfer 97.0 0.0024 8.3E-08 64.6 9.7 78 243-320 70-154 (237)
58 3r3h_A O-methyltransferase, SA 96.9 0.00063 2.2E-08 69.4 4.9 79 242-320 59-143 (242)
59 2nyu_A Putative ribosomal RNA 96.9 0.018 6.2E-07 55.5 15.3 73 242-321 21-105 (196)
60 1i9g_A Hypothetical protein RV 96.9 0.0032 1.1E-07 64.9 10.3 88 226-321 85-179 (280)
61 2p35_A Trans-aconitate 2-methy 96.9 0.0019 6.6E-08 65.4 8.4 81 230-321 23-103 (259)
62 2fhp_A Methylase, putative; al 96.9 0.0026 9E-08 60.9 8.8 87 230-321 33-124 (187)
63 1xdz_A Methyltransferase GIDB; 96.9 0.0015 5.2E-08 66.0 7.4 75 242-319 69-147 (240)
64 4dmg_A Putative uncharacterize 96.8 0.012 4.1E-07 64.4 14.8 71 242-321 213-288 (393)
65 2hnk_A SAM-dependent O-methylt 96.8 0.0032 1.1E-07 63.5 9.5 80 242-321 59-155 (239)
66 3tfw_A Putative O-methyltransf 96.8 0.0021 7.1E-08 65.6 8.1 77 242-321 62-144 (248)
67 2h00_A Methyltransferase 10 do 96.8 0.0018 6.2E-08 65.9 7.6 80 243-323 65-150 (254)
68 2fca_A TRNA (guanine-N(7)-)-me 96.8 0.0025 8.5E-08 63.4 8.4 75 243-321 38-116 (213)
69 4gek_A TRNA (CMO5U34)-methyltr 96.8 0.0018 6.2E-08 66.8 7.5 73 242-321 69-147 (261)
70 2esr_A Methyltransferase; stru 96.8 0.0016 5.6E-08 62.1 6.7 85 229-321 19-108 (177)
71 1yzh_A TRNA (guanine-N(7)-)-me 96.8 0.0026 9E-08 62.9 8.0 75 242-320 40-118 (214)
72 3njr_A Precorrin-6Y methylase; 96.8 0.0034 1.2E-07 62.0 8.7 80 231-321 46-130 (204)
73 3id6_C Fibrillarin-like rRNA/T 96.7 0.0043 1.5E-07 63.0 9.1 76 242-321 75-154 (232)
74 1xxl_A YCGJ protein; structura 96.7 0.0051 1.7E-07 61.9 9.6 80 229-319 10-93 (239)
75 2bm8_A Cephalosporin hydroxyla 96.7 0.0031 1E-07 64.0 7.9 78 243-322 81-161 (236)
76 3dh0_A SAM dependent methyltra 96.7 0.0049 1.7E-07 60.7 9.2 84 230-321 27-114 (219)
77 3g07_A 7SK snRNA methylphospha 96.7 0.0052 1.8E-07 64.2 9.8 58 228-287 32-90 (292)
78 2ex4_A Adrenal gland protein A 96.7 0.0043 1.5E-07 62.5 8.7 71 243-320 79-153 (241)
79 2yxd_A Probable cobalt-precorr 96.6 0.0053 1.8E-07 58.2 8.8 82 228-321 23-108 (183)
80 3p9n_A Possible methyltransfer 96.6 0.0037 1.3E-07 60.5 7.7 74 243-321 44-121 (189)
81 1fbn_A MJ fibrillarin homologu 96.6 0.0054 1.8E-07 61.5 9.2 74 242-318 73-148 (230)
82 2yx1_A Hypothetical protein MJ 96.6 0.0041 1.4E-07 66.5 8.7 68 242-321 194-266 (336)
83 1nv8_A HEMK protein; class I a 96.6 0.0058 2E-07 63.8 9.5 84 229-324 112-203 (284)
84 1sui_A Caffeoyl-COA O-methyltr 96.6 0.0054 1.8E-07 62.6 8.8 79 243-321 79-164 (247)
85 2ozv_A Hypothetical protein AT 96.6 0.0067 2.3E-07 62.3 9.6 80 242-322 35-124 (260)
86 1ws6_A Methyltransferase; stru 96.6 0.005 1.7E-07 57.9 8.0 75 243-321 41-118 (171)
87 3dlc_A Putative S-adenosyl-L-m 96.5 0.0059 2E-07 59.7 8.6 84 227-321 31-119 (219)
88 4dzr_A Protein-(glutamine-N5) 96.5 0.0029 9.9E-08 61.8 6.3 88 230-323 19-111 (215)
89 3cbg_A O-methyltransferase; cy 96.5 0.0044 1.5E-07 62.4 7.8 79 242-320 71-155 (232)
90 3lpm_A Putative methyltransfer 96.5 0.0033 1.1E-07 64.3 6.9 78 242-324 47-130 (259)
91 2ipx_A RRNA 2'-O-methyltransfe 96.5 0.0068 2.3E-07 60.7 8.7 78 242-321 76-155 (233)
92 3hem_A Cyclopropane-fatty-acyl 96.5 0.01 3.5E-07 61.9 10.4 89 229-332 61-154 (302)
93 2ift_A Putative methylase HI07 96.4 0.0028 9.5E-08 62.4 5.3 75 243-322 53-134 (201)
94 2avd_A Catechol-O-methyltransf 96.4 0.0094 3.2E-07 59.2 9.3 79 242-320 68-152 (229)
95 3c3p_A Methyltransferase; NP_9 96.4 0.0034 1.1E-07 61.9 5.8 73 243-320 56-133 (210)
96 3lbf_A Protein-L-isoaspartate 96.4 0.01 3.6E-07 58.0 9.3 88 225-323 62-153 (210)
97 2pbf_A Protein-L-isoaspartate 96.3 0.013 4.6E-07 58.1 9.9 94 226-323 64-172 (227)
98 3gru_A Dimethyladenosine trans 96.3 0.0071 2.4E-07 63.6 8.2 91 223-324 33-125 (295)
99 3k6r_A Putative transferase PH 96.3 0.011 3.6E-07 61.7 9.4 78 242-327 124-206 (278)
100 2yxe_A Protein-L-isoaspartate 96.3 0.015 5E-07 57.2 10.0 90 226-323 63-156 (215)
101 3fpf_A Mtnas, putative unchara 96.3 0.015 5E-07 61.1 10.2 73 242-322 121-197 (298)
102 1nt2_A Fibrillarin-like PRE-rR 96.3 0.0085 2.9E-07 59.5 8.1 74 242-320 56-133 (210)
103 3g89_A Ribosomal RNA small sub 96.3 0.0067 2.3E-07 62.0 7.5 75 242-319 79-157 (249)
104 1wy7_A Hypothetical protein PH 96.3 0.015 5.2E-07 56.7 9.8 71 242-322 48-121 (207)
105 3opn_A Putative hemolysin; str 96.3 0.01 3.4E-07 60.1 8.6 90 229-325 25-115 (232)
106 3uwp_A Histone-lysine N-methyl 96.3 0.018 6.3E-07 63.0 11.2 88 226-320 159-259 (438)
107 1zq9_A Probable dimethyladenos 96.2 0.012 3.9E-07 61.5 9.2 87 225-324 13-104 (285)
108 3dxy_A TRNA (guanine-N(7)-)-me 96.2 0.009 3.1E-07 59.7 7.9 76 242-321 33-113 (218)
109 3a27_A TYW2, uncharacterized p 96.2 0.0078 2.7E-07 62.3 7.6 73 242-321 118-194 (272)
110 3tqs_A Ribosomal RNA small sub 96.2 0.0078 2.7E-07 61.9 7.5 73 225-303 14-88 (255)
111 1ne2_A Hypothetical protein TA 96.2 0.012 4E-07 57.4 8.4 68 242-321 50-118 (200)
112 3jwg_A HEN1, methyltransferase 96.2 0.01 3.6E-07 58.5 8.0 86 226-320 15-109 (219)
113 3ckk_A TRNA (guanine-N(7)-)-me 96.2 0.008 2.7E-07 60.9 7.3 75 242-320 45-130 (235)
114 3jwh_A HEN1; methyltransferase 96.1 0.014 4.7E-07 57.6 8.8 85 227-320 16-109 (217)
115 3gdh_A Trimethylguanosine synt 96.1 0.0093 3.2E-07 59.8 7.6 73 243-324 78-155 (241)
116 2h1r_A Dimethyladenosine trans 96.1 0.0059 2E-07 64.2 6.3 85 225-322 27-115 (299)
117 2vdv_E TRNA (guanine-N(7)-)-me 96.1 0.011 3.8E-07 59.9 7.9 76 242-321 48-136 (246)
118 3g5t_A Trans-aconitate 3-methy 96.1 0.016 5.5E-07 60.3 9.3 79 242-321 35-121 (299)
119 1dl5_A Protein-L-isoaspartate 96.1 0.019 6.6E-07 60.6 9.9 89 227-323 62-154 (317)
120 4fzv_A Putative methyltransfer 96.0 0.0075 2.6E-07 65.1 6.8 79 242-325 147-235 (359)
121 3ujc_A Phosphoethanolamine N-m 96.0 0.024 8.2E-07 57.2 10.0 83 229-321 44-128 (266)
122 3ll7_A Putative methyltransfer 96.0 0.011 3.9E-07 64.8 7.9 75 243-323 93-173 (410)
123 3tm4_A TRNA (guanine N2-)-meth 96.0 0.008 2.7E-07 65.2 6.7 75 242-322 216-295 (373)
124 3uzu_A Ribosomal RNA small sub 96.0 0.0071 2.4E-07 63.1 6.0 73 226-302 28-102 (279)
125 3kkz_A Uncharacterized protein 96.0 0.018 6.1E-07 58.8 8.9 84 229-321 34-122 (267)
126 1vbf_A 231AA long hypothetical 95.9 0.03 1E-06 55.6 10.2 88 225-323 55-144 (231)
127 3f4k_A Putative methyltransfer 95.9 0.025 8.6E-07 57.0 9.6 84 228-320 33-121 (257)
128 2fpo_A Methylase YHHF; structu 95.9 0.012 4.2E-07 57.8 6.9 72 243-320 54-129 (202)
129 3ftd_A Dimethyladenosine trans 95.9 0.0087 3E-07 61.3 6.0 71 226-302 17-88 (249)
130 1qam_A ERMC' methyltransferase 95.8 0.014 4.8E-07 59.3 7.4 72 225-302 15-88 (244)
131 3bkx_A SAM-dependent methyltra 95.8 0.013 4.3E-07 60.0 7.1 94 230-331 33-138 (275)
132 3g5l_A Putative S-adenosylmeth 95.8 0.034 1.2E-06 56.0 10.2 81 231-321 35-116 (253)
133 1pjz_A Thiopurine S-methyltran 95.8 0.022 7.5E-07 56.0 8.5 80 230-319 12-107 (203)
134 1kpg_A CFA synthase;, cyclopro 95.8 0.024 8.2E-07 58.4 9.0 79 229-320 53-136 (287)
135 2b3t_A Protein methyltransfera 95.7 0.032 1.1E-06 57.4 9.8 74 243-323 109-186 (276)
136 3ou2_A SAM-dependent methyltra 95.7 0.06 2.1E-06 52.5 11.3 81 229-320 34-114 (218)
137 2fk8_A Methoxy mycolic acid sy 95.7 0.023 8E-07 59.5 8.8 80 229-321 79-163 (318)
138 1nkv_A Hypothetical protein YJ 95.7 0.024 8.1E-07 57.2 8.4 81 228-319 24-109 (256)
139 2nxc_A L11 mtase, ribosomal pr 95.7 0.028 9.5E-07 57.4 8.9 71 242-321 119-192 (254)
140 2qe6_A Uncharacterized protein 95.7 0.065 2.2E-06 55.4 11.8 89 229-320 65-164 (274)
141 3vc1_A Geranyl diphosphate 2-C 95.7 0.031 1.1E-06 58.6 9.5 82 230-320 106-192 (312)
142 3fut_A Dimethyladenosine trans 95.7 0.01 3.5E-07 61.6 5.6 88 225-323 32-120 (271)
143 1r18_A Protein-L-isoaspartate( 95.6 0.019 6.7E-07 57.1 7.3 93 225-323 67-173 (227)
144 1uwv_A 23S rRNA (uracil-5-)-me 95.6 0.019 6.6E-07 63.5 7.8 86 228-320 274-363 (433)
145 3bkw_A MLL3908 protein, S-aden 95.5 0.052 1.8E-06 54.0 10.0 80 231-320 34-114 (243)
146 3orh_A Guanidinoacetate N-meth 95.4 0.018 6.2E-07 58.0 6.4 80 242-326 59-141 (236)
147 3bus_A REBM, methyltransferase 95.4 0.047 1.6E-06 55.6 9.5 82 229-320 50-136 (273)
148 1jg1_A PIMT;, protein-L-isoasp 95.3 0.033 1.1E-06 55.8 7.9 89 225-323 76-168 (235)
149 2yvl_A TRMI protein, hypotheti 95.3 0.058 2E-06 53.9 9.6 81 230-321 81-166 (248)
150 3gu3_A Methyltransferase; alph 95.3 0.026 8.8E-07 58.4 7.1 87 227-321 8-97 (284)
151 3ggd_A SAM-dependent methyltra 95.3 0.027 9.2E-07 56.5 7.0 76 242-320 55-131 (245)
152 2o57_A Putative sarcosine dime 95.3 0.053 1.8E-06 56.1 9.5 72 242-320 81-157 (297)
153 1wzn_A SAM-dependent methyltra 95.2 0.051 1.8E-06 54.6 9.0 79 230-320 31-112 (252)
154 3ege_A Putative methyltransfer 95.2 0.064 2.2E-06 54.5 9.8 83 228-323 22-104 (261)
155 3mq2_A 16S rRNA methyltransfer 95.2 0.045 1.5E-06 53.8 8.3 71 229-303 16-94 (218)
156 2as0_A Hypothetical protein PH 95.2 0.026 8.9E-07 61.5 7.1 75 243-320 217-296 (396)
157 4fsd_A Arsenic methyltransfera 95.2 0.051 1.7E-06 58.9 9.3 79 242-320 82-173 (383)
158 2p8j_A S-adenosylmethionine-de 95.1 0.037 1.3E-06 53.8 7.4 86 226-320 8-96 (209)
159 3c0k_A UPF0064 protein YCCW; P 95.1 0.053 1.8E-06 59.1 9.4 76 243-321 220-301 (396)
160 1u2z_A Histone-lysine N-methyl 95.1 0.071 2.4E-06 58.9 10.4 88 226-319 228-329 (433)
161 1zx0_A Guanidinoacetate N-meth 95.1 0.025 8.5E-07 56.7 6.2 74 242-320 59-135 (236)
162 3ocj_A Putative exported prote 95.1 0.014 4.8E-07 61.0 4.4 73 242-320 117-194 (305)
163 3l8d_A Methyltransferase; stru 95.1 0.059 2E-06 53.6 8.9 70 242-319 52-122 (242)
164 4dcm_A Ribosomal RNA large sub 95.1 0.052 1.8E-06 58.9 9.0 82 232-323 214-302 (375)
165 2ih2_A Modification methylase 95.0 0.033 1.1E-06 60.8 7.4 80 230-323 29-108 (421)
166 2igt_A SAM dependent methyltra 95.0 0.06 2.1E-06 57.4 9.3 76 242-321 152-233 (332)
167 3bt7_A TRNA (uracil-5-)-methyl 95.0 0.056 1.9E-06 58.4 9.1 85 229-320 203-302 (369)
168 1mjf_A Spermidine synthase; sp 95.0 0.058 2E-06 55.9 8.9 72 243-321 75-160 (281)
169 1qyr_A KSGA, high level kasuga 94.9 0.027 9.1E-07 57.8 5.8 94 224-325 5-102 (252)
170 1iy9_A Spermidine synthase; ro 94.9 0.06 2E-06 55.7 8.6 74 243-321 75-156 (275)
171 2i7c_A Spermidine synthase; tr 94.8 0.082 2.8E-06 54.9 9.5 74 243-321 78-159 (283)
172 3bwc_A Spermidine synthase; SA 94.8 0.076 2.6E-06 55.8 9.3 74 243-320 95-176 (304)
173 4htf_A S-adenosylmethionine-de 94.7 0.047 1.6E-06 56.1 7.3 80 230-320 59-143 (285)
174 3mgg_A Methyltransferase; NYSG 94.7 0.083 2.8E-06 53.9 9.1 74 242-321 36-113 (276)
175 3ofk_A Nodulation protein S; N 94.7 0.072 2.5E-06 52.1 8.2 70 242-320 50-121 (216)
176 1xj5_A Spermidine synthase 1; 94.7 0.087 3E-06 56.2 9.4 75 243-321 120-202 (334)
177 3e8s_A Putative SAM dependent 94.7 0.043 1.5E-06 53.8 6.6 85 230-323 42-126 (227)
178 3gjy_A Spermidine synthase; AP 94.7 0.069 2.4E-06 56.5 8.4 73 245-321 91-167 (317)
179 1wxx_A TT1595, hypothetical pr 94.7 0.044 1.5E-06 59.5 7.1 74 243-320 209-286 (382)
180 1xtp_A LMAJ004091AAA; SGPP, st 94.6 0.091 3.1E-06 52.6 9.0 80 230-319 83-164 (254)
181 3i9f_A Putative type 11 methyl 94.6 0.07 2.4E-06 50.0 7.6 77 230-321 7-83 (170)
182 3giw_A Protein of unknown func 94.6 0.13 4.5E-06 53.2 10.2 77 228-307 65-148 (277)
183 1ve3_A Hypothetical protein PH 94.6 0.078 2.7E-06 52.1 8.3 70 243-320 38-110 (227)
184 1vl5_A Unknown conserved prote 94.6 0.08 2.7E-06 53.5 8.5 87 225-322 22-112 (260)
185 2yqz_A Hypothetical protein TT 94.5 0.13 4.4E-06 51.7 9.9 71 242-320 38-111 (263)
186 3p2e_A 16S rRNA methylase; met 94.5 0.076 2.6E-06 53.1 8.0 83 230-321 15-105 (225)
187 2gb4_A Thiopurine S-methyltran 94.5 0.12 3.9E-06 52.9 9.4 70 242-318 67-157 (252)
188 3iv6_A Putative Zn-dependent a 94.4 0.036 1.2E-06 57.2 5.2 88 226-323 31-120 (261)
189 2b78_A Hypothetical protein SM 94.3 0.071 2.4E-06 58.0 7.6 75 243-320 212-292 (385)
190 1inl_A Spermidine synthase; be 94.2 0.055 1.9E-06 56.6 6.4 74 243-321 90-171 (296)
191 1yub_A Ermam, rRNA methyltrans 94.2 0.013 4.3E-07 59.6 1.4 73 225-303 14-88 (245)
192 3bgv_A MRNA CAP guanine-N7 met 94.2 0.067 2.3E-06 55.9 7.0 75 225-302 17-102 (313)
193 3cgg_A SAM-dependent methyltra 94.2 0.14 4.9E-06 48.5 8.8 69 242-320 45-114 (195)
194 2pt6_A Spermidine synthase; tr 94.1 0.058 2E-06 57.2 6.4 74 243-321 116-197 (321)
195 3m33_A Uncharacterized protein 94.1 0.12 4.1E-06 51.2 8.5 70 242-320 47-118 (226)
196 3ldu_A Putative methylase; str 94.1 0.051 1.7E-06 59.2 6.1 76 242-323 194-311 (385)
197 2pxx_A Uncharacterized protein 94.1 0.13 4.4E-06 49.8 8.6 73 242-321 41-115 (215)
198 3sm3_A SAM-dependent methyltra 94.1 0.13 4.5E-06 50.5 8.7 71 242-320 29-108 (235)
199 3g2m_A PCZA361.24; SAM-depende 94.1 0.069 2.3E-06 55.4 6.8 78 229-319 72-156 (299)
200 3hp7_A Hemolysin, putative; st 94.1 0.077 2.6E-06 55.5 7.1 88 230-324 74-162 (291)
201 3q87_B N6 adenine specific DNA 94.1 0.076 2.6E-06 50.4 6.6 66 243-323 23-88 (170)
202 1ri5_A MRNA capping enzyme; me 94.1 0.17 5.8E-06 51.9 9.7 74 242-321 63-141 (298)
203 2b2c_A Spermidine synthase; be 94.0 0.19 6.6E-06 53.0 10.1 74 243-321 108-189 (314)
204 3k0b_A Predicted N6-adenine-sp 93.9 0.07 2.4E-06 58.2 6.6 73 242-320 200-314 (393)
205 2p7i_A Hypothetical protein; p 93.8 0.13 4.6E-06 50.9 8.2 68 243-320 42-110 (250)
206 3mcz_A O-methyltransferase; ad 93.8 0.096 3.3E-06 55.7 7.5 81 230-319 168-254 (352)
207 3adn_A Spermidine synthase; am 93.8 0.078 2.7E-06 55.5 6.6 74 243-321 83-165 (294)
208 2kw5_A SLR1183 protein; struct 93.8 0.14 4.9E-06 49.4 8.1 69 243-320 30-101 (202)
209 1y8c_A S-adenosylmethionine-de 93.8 0.13 4.4E-06 51.0 8.0 70 243-321 37-109 (246)
210 1uir_A Polyamine aminopropyltr 93.8 0.066 2.3E-06 56.5 6.0 74 243-321 77-159 (314)
211 3ldg_A Putative uncharacterize 93.7 0.093 3.2E-06 57.1 7.1 73 242-320 193-307 (384)
212 2oxt_A Nucleoside-2'-O-methylt 93.6 0.056 1.9E-06 55.7 4.9 69 242-322 73-149 (265)
213 3h2b_A SAM-dependent methyltra 93.6 0.14 4.7E-06 49.5 7.5 69 243-320 41-109 (203)
214 2fyt_A Protein arginine N-meth 93.5 0.2 6.8E-06 53.4 9.4 72 242-321 63-139 (340)
215 3ccf_A Cyclopropane-fatty-acyl 93.5 0.13 4.5E-06 52.6 7.6 82 226-321 43-125 (279)
216 2o07_A Spermidine synthase; st 93.5 0.071 2.4E-06 56.1 5.5 74 243-321 95-176 (304)
217 3q7e_A Protein arginine N-meth 93.4 0.16 5.4E-06 54.3 8.4 72 242-321 65-141 (349)
218 3gwz_A MMCR; methyltransferase 93.4 0.34 1.2E-05 52.0 11.0 79 230-320 192-275 (369)
219 3lcc_A Putative methyl chlorid 93.4 0.13 4.6E-06 51.0 7.3 69 243-320 66-139 (235)
220 3d2l_A SAM-dependent methyltra 93.3 0.16 5.4E-06 50.4 7.6 69 243-321 33-104 (243)
221 3thr_A Glycine N-methyltransfe 93.3 0.12 4.1E-06 53.2 6.9 81 231-319 48-136 (293)
222 1x19_A CRTF-related protein; m 93.3 0.22 7.7E-06 53.1 9.2 79 229-319 179-262 (359)
223 4hg2_A Methyltransferase type 93.2 0.25 8.6E-06 50.5 9.1 84 225-319 22-105 (257)
224 3pfg_A N-methyltransferase; N, 93.2 0.16 5.4E-06 51.4 7.5 68 243-321 50-118 (263)
225 3dmg_A Probable ribosomal RNA 93.1 0.17 5.8E-06 55.0 8.0 72 243-322 233-307 (381)
226 3e23_A Uncharacterized protein 93.1 0.12 4.2E-06 50.3 6.4 67 242-320 42-109 (211)
227 2p41_A Type II methyltransfera 93.1 0.063 2.2E-06 56.5 4.5 73 242-325 81-160 (305)
228 3htx_A HEN1; HEN1, small RNA m 93.1 0.22 7.4E-06 59.0 9.2 84 229-320 710-803 (950)
229 2wa2_A Non-structural protein 93.1 0.065 2.2E-06 55.6 4.5 69 242-322 81-157 (276)
230 1p91_A Ribosomal RNA large sub 93.0 0.28 9.4E-06 49.7 9.0 71 242-319 84-154 (269)
231 3axs_A Probable N(2),N(2)-dime 93.0 0.15 5.3E-06 55.5 7.4 76 242-321 51-133 (392)
232 2cmg_A Spermidine synthase; tr 92.9 0.19 6.4E-06 51.6 7.6 66 244-320 73-146 (262)
233 2pjd_A Ribosomal RNA small sub 92.5 0.096 3.3E-06 55.8 4.9 79 232-321 188-269 (343)
234 3r0q_C Probable protein argini 92.4 0.26 8.9E-06 53.2 8.3 71 242-321 62-137 (376)
235 2jjq_A Uncharacterized RNA met 92.4 0.22 7.6E-06 54.9 7.8 69 242-320 289-360 (425)
236 1qzz_A RDMB, aclacinomycin-10- 92.2 0.27 9.1E-06 52.6 8.0 80 229-320 171-255 (374)
237 3sso_A Methyltransferase; macr 92.0 0.43 1.5E-05 52.1 9.2 81 229-320 206-295 (419)
238 3bxo_A N,N-dimethyltransferase 91.9 0.36 1.2E-05 47.6 8.0 66 243-319 40-106 (239)
239 3bzb_A Uncharacterized protein 91.8 0.59 2E-05 48.1 9.8 76 242-319 78-169 (281)
240 3kr9_A SAM-dependent methyltra 91.7 0.23 7.9E-06 49.9 6.4 70 243-319 15-90 (225)
241 3lec_A NADB-rossmann superfami 91.6 0.25 8.5E-06 49.8 6.5 71 242-318 20-95 (230)
242 1g6q_1 HnRNP arginine N-methyl 91.6 0.42 1.4E-05 50.5 8.6 71 242-320 37-112 (328)
243 2dul_A N(2),N(2)-dimethylguano 91.6 0.18 6.1E-06 54.7 5.8 72 244-320 48-138 (378)
244 2y1w_A Histone-arginine methyl 91.5 0.5 1.7E-05 50.3 9.1 79 230-320 40-123 (348)
245 3dli_A Methyltransferase; PSI- 91.5 0.5 1.7E-05 47.0 8.6 69 242-320 40-108 (240)
246 4a6d_A Hydroxyindole O-methylt 91.4 1.1 3.8E-05 47.7 11.7 66 230-300 169-238 (353)
247 3v97_A Ribosomal RNA large sub 91.3 0.29 1E-05 57.4 7.6 74 242-321 538-617 (703)
248 3i53_A O-methyltransferase; CO 91.2 0.44 1.5E-05 50.1 8.3 65 231-300 160-229 (332)
249 2ip2_A Probable phenazine-spec 91.2 0.42 1.4E-05 50.2 8.1 76 230-318 158-238 (334)
250 3dp7_A SAM-dependent methyltra 91.1 0.51 1.7E-05 50.5 8.7 71 243-319 179-254 (363)
251 3b3j_A Histone-arginine methyl 90.9 0.51 1.7E-05 52.8 8.8 79 230-320 148-231 (480)
252 2gs9_A Hypothetical protein TT 90.9 0.51 1.8E-05 45.7 7.9 66 243-320 36-102 (211)
253 1tw3_A COMT, carminomycin 4-O- 90.5 0.55 1.9E-05 49.9 8.3 68 229-301 172-244 (360)
254 2okc_A Type I restriction enzy 90.3 0.23 7.9E-06 54.9 5.3 86 231-325 162-265 (445)
255 3p8z_A Mtase, non-structural p 90.3 0.26 9E-06 49.6 5.0 87 229-327 67-158 (267)
256 3lst_A CALO1 methyltransferase 90.3 1 3.4E-05 47.8 10.1 77 230-320 174-254 (348)
257 3gnl_A Uncharacterized protein 90.3 0.37 1.3E-05 48.9 6.3 57 242-299 20-81 (244)
258 2avn_A Ubiquinone/menaquinone 90.0 0.86 2.9E-05 45.9 8.9 66 243-319 54-120 (260)
259 2vdw_A Vaccinia virus capping 89.9 0.37 1.3E-05 50.4 6.2 41 243-285 48-88 (302)
260 3v97_A Ribosomal RNA large sub 89.7 0.21 7.3E-06 58.6 4.6 76 242-320 189-310 (703)
261 3reo_A (ISO)eugenol O-methyltr 89.5 1.1 3.6E-05 48.1 9.6 67 229-301 191-257 (368)
262 3cc8_A Putative methyltransfer 89.5 0.45 1.5E-05 46.4 6.1 77 230-320 23-100 (230)
263 3p9c_A Caffeic acid O-methyltr 89.2 1.2 4.1E-05 47.6 9.8 66 230-301 190-255 (364)
264 2fyw_A Conserved hypothetical 89.0 0.62 2.1E-05 47.9 6.9 81 640-721 2-104 (267)
265 2r3s_A Uncharacterized protein 88.9 0.46 1.6E-05 49.7 6.1 69 243-319 165-238 (335)
266 3lkz_A Non-structural protein 87.9 0.33 1.1E-05 50.4 3.9 87 229-326 83-173 (321)
267 1fp1_D Isoliquiritigenin 2'-O- 87.4 1.9 6.4E-05 46.1 9.8 67 242-320 208-274 (372)
268 2qfm_A Spermine synthase; sper 87.0 1.5 5.1E-05 47.1 8.6 73 244-321 189-275 (364)
269 2i62_A Nicotinamide N-methyltr 87.0 0.56 1.9E-05 47.0 5.1 45 242-288 55-100 (265)
270 1fp2_A Isoflavone O-methyltran 86.5 1 3.5E-05 47.8 7.0 55 242-300 187-241 (352)
271 2ar0_A M.ecoki, type I restric 86.4 1.5 5E-05 49.8 8.6 87 233-326 162-274 (541)
272 3fzg_A 16S rRNA methylase; met 85.6 1.6 5.6E-05 42.7 7.2 68 243-319 49-121 (200)
273 2zig_A TTHA0409, putative modi 84.6 1.5 5.1E-05 45.5 7.0 53 228-287 224-277 (297)
274 2nyd_A UPF0135 protein SA1388; 82.9 1.5 5E-05 47.3 6.1 80 640-720 4-104 (370)
275 3lkd_A Type I restriction-modi 82.8 1.8 6.2E-05 49.1 7.1 81 242-324 220-308 (542)
276 1i4w_A Mitochondrial replicati 82.1 3.1 0.00011 44.4 8.3 79 223-305 35-120 (353)
277 4e2x_A TCAB9; kijanose, tetron 81.9 2.4 8.4E-05 45.8 7.6 52 228-285 95-146 (416)
278 2gx8_A NIF3-related protein; s 81.1 2 6.9E-05 46.6 6.4 80 640-720 28-129 (397)
279 1nmo_A Hypothetical protein YB 81.0 2.7 9.4E-05 42.5 7.1 78 642-721 2-100 (247)
280 2xyq_A Putative 2'-O-methyl tr 80.7 1.1 3.7E-05 46.7 4.0 62 242-320 62-130 (290)
281 4azs_A Methyltransferase WBDD; 80.6 1.9 6.4E-05 49.2 6.3 79 244-330 67-149 (569)
282 1zg3_A Isoflavanone 4'-O-methy 80.3 4.6 0.00016 42.7 8.9 66 243-320 193-258 (358)
283 3gcz_A Polyprotein; flavivirus 79.5 1.9 6.5E-05 44.5 5.3 85 230-323 80-166 (282)
284 3o4f_A Spermidine synthase; am 79.4 2 7E-05 44.7 5.6 71 245-321 85-165 (294)
285 3c6k_A Spermine synthase; sper 77.6 3.3 0.00011 44.6 6.7 73 245-321 207-292 (381)
286 1vlm_A SAM-dependent methyltra 77.6 5.1 0.00017 38.9 7.7 63 243-320 47-109 (219)
287 2aot_A HMT, histamine N-methyl 76.3 4.6 0.00016 41.3 7.3 92 242-335 51-155 (292)
288 3cvo_A Methyltransferase-like 75.6 4.3 0.00015 39.8 6.4 75 243-321 30-130 (202)
289 1g60_A Adenine-specific methyl 75.4 3.5 0.00012 41.8 6.0 54 228-288 201-255 (260)
290 4hc4_A Protein arginine N-meth 72.7 5.8 0.0002 42.7 7.1 70 243-321 83-157 (376)
291 2g72_A Phenylethanolamine N-me 72.0 2.8 9.6E-05 42.8 4.3 43 243-287 71-114 (289)
292 2py6_A Methyltransferase FKBM; 70.5 5.1 0.00018 43.6 6.1 43 242-284 225-268 (409)
293 2yyb_A Hypothetical protein TT 69.8 3.9 0.00013 41.3 4.6 77 642-721 2-100 (242)
294 3rxy_A NIF3 protein; structura 68.9 11 0.00037 38.5 7.5 54 640-695 6-65 (278)
295 2a14_A Indolethylamine N-methy 68.0 2.4 8.1E-05 42.9 2.6 42 242-285 54-95 (263)
296 4gx0_A TRKA domain protein; me 67.3 1.4E+02 0.0047 33.3 17.5 65 252-319 133-198 (565)
297 3evf_A RNA-directed RNA polyme 67.0 5.8 0.0002 40.8 5.2 37 242-279 73-109 (277)
298 2qy6_A UPF0209 protein YFCK; s 65.3 6 0.00021 40.2 5.0 37 242-278 59-106 (257)
299 2oo3_A Protein involved in cat 65.2 3.9 0.00013 42.3 3.5 87 226-320 77-166 (283)
300 3khk_A Type I restriction-modi 64.8 2.5 8.4E-05 48.0 2.1 86 232-325 237-341 (544)
301 3s1s_A Restriction endonucleas 62.5 7.3 0.00025 46.0 5.5 78 243-324 321-410 (878)
302 4hg2_A Methyltransferase type 60.4 5.8 0.0002 40.2 3.8 36 439-474 115-155 (257)
303 2wk1_A NOVP; transferase, O-me 59.9 22 0.00076 36.5 8.2 78 243-323 106-219 (282)
304 3ufb_A Type I restriction-modi 59.3 9.6 0.00033 42.9 5.7 88 232-324 209-313 (530)
305 3ua3_A Protein arginine N-meth 58.9 10 0.00036 44.0 5.9 78 244-321 410-503 (745)
306 3eld_A Methyltransferase; flav 57.2 12 0.00043 38.7 5.6 37 242-279 80-116 (300)
307 3fwz_A Inner membrane protein 56.9 16 0.00055 32.8 5.9 68 252-323 13-81 (140)
308 2px2_A Genome polyprotein [con 55.5 4.8 0.00016 41.0 2.1 73 241-325 71-151 (269)
309 3llv_A Exopolyphosphatase-rela 55.4 22 0.00074 31.6 6.5 67 252-322 12-79 (141)
310 4auk_A Ribosomal RNA large sub 55.2 29 0.001 37.2 8.3 75 241-327 209-284 (375)
311 2aef_A Calcium-gated potassium 55.0 28 0.00095 34.0 7.8 66 252-322 15-80 (234)
312 1af7_A Chemotaxis receptor met 52.4 13 0.00045 38.0 5.0 42 244-285 106-154 (274)
313 2zfu_A Nucleomethylin, cerebra 52.4 13 0.00044 35.6 4.7 68 230-321 56-123 (215)
314 3tos_A CALS11; methyltransfera 51.8 68 0.0023 32.4 10.1 80 244-323 70-192 (257)
315 1lnq_A MTHK channels, potassiu 51.3 20 0.00067 37.4 6.2 66 252-322 121-186 (336)
316 1boo_A Protein (N-4 cytosine-s 50.6 24 0.00083 36.8 6.8 54 228-288 241-295 (323)
317 4gek_A TRNA (CMO5U34)-methyltr 50.5 9.7 0.00033 38.5 3.5 38 437-474 156-193 (261)
318 1eg2_A Modification methylase 49.8 41 0.0014 35.1 8.3 54 228-288 231-288 (319)
319 4dzr_A Protein-(glutamine-N5) 49.4 9.3 0.00032 36.2 3.1 41 433-473 138-178 (215)
320 1rdu_A Conserved hypothetical 49.3 12 0.00042 32.7 3.6 44 675-718 48-91 (116)
321 2xyq_A Putative 2'-O-methyl tr 48.3 9.7 0.00033 39.4 3.2 39 437-475 149-187 (290)
322 3ajd_A Putative methyltransfer 45.9 13 0.00043 37.8 3.6 39 437-475 189-230 (274)
323 1eo1_A Hypothetical protein MT 45.6 24 0.00081 31.2 5.0 43 676-718 52-94 (124)
324 1ixk_A Methyltransferase; open 45.4 16 0.00054 38.0 4.3 37 439-475 226-265 (315)
325 3lcv_B Sisomicin-gentamicin re 45.3 19 0.00066 36.9 4.7 85 244-337 133-220 (281)
326 2pxx_A Uncharacterized protein 45.1 11 0.00039 35.7 2.9 28 435-462 135-162 (215)
327 2edu_A Kinesin-like protein KI 43.7 3.1 0.00011 35.7 -1.2 58 339-402 10-72 (98)
328 2wfb_A Putative uncharacterize 43.4 15 0.00052 32.3 3.3 43 676-718 54-96 (120)
329 1id1_A Putative potassium chan 40.7 37 0.0013 30.7 5.6 69 253-322 10-80 (153)
330 3ggd_A SAM-dependent methyltra 39.8 22 0.00076 34.7 4.2 37 437-473 141-177 (245)
331 3f4w_A Putative hexulose 6 pho 39.3 1.1E+02 0.0037 29.2 9.1 123 537-698 64-189 (211)
332 3rd5_A Mypaa.01249.C; ssgcid, 38.8 1.1E+02 0.0037 30.7 9.4 73 250-325 21-98 (291)
333 2kw5_A SLR1183 protein; struct 37.8 21 0.00071 33.7 3.5 30 435-464 107-136 (202)
334 3frh_A 16S rRNA methylase; met 37.1 52 0.0018 33.2 6.3 80 243-334 105-187 (253)
335 2g72_A Phenylethanolamine N-me 36.9 15 0.00053 37.1 2.5 29 431-459 187-215 (289)
336 2yx6_A Hypothetical protein PH 36.8 38 0.0013 29.7 4.8 37 680-716 54-90 (121)
337 2re2_A Uncharacterized protein 36.1 26 0.00089 31.8 3.7 42 676-718 66-107 (136)
338 1pjz_A Thiopurine S-methyltran 35.2 20 0.00068 34.3 2.9 25 437-461 118-142 (203)
339 3vnd_A TSA, tryptophan synthas 34.7 2.7E+02 0.0094 28.0 11.5 121 540-698 113-237 (267)
340 4g65_A TRK system potassium up 34.3 70 0.0024 35.1 7.5 87 226-319 218-306 (461)
341 2a14_A Indolethylamine N-methy 33.8 20 0.00069 35.8 2.8 26 435-460 173-198 (263)
342 2gb4_A Thiopurine S-methyltran 33.8 15 0.0005 37.0 1.7 25 437-461 169-193 (252)
343 3cu2_A Ribulose-5-phosphate 3- 33.7 1.7E+02 0.0057 29.1 9.5 131 531-698 73-219 (237)
344 2hmt_A YUAA protein; RCK, KTN, 33.0 48 0.0017 28.9 5.0 68 252-323 12-80 (144)
345 2i62_A Nicotinamide N-methyltr 32.5 23 0.00078 34.8 2.9 29 432-460 171-199 (265)
346 3ofk_A Nodulation protein S; N 32.5 22 0.00075 33.9 2.7 28 435-462 130-157 (216)
347 1vl5_A Unknown conserved prote 32.4 25 0.00085 34.7 3.2 37 437-473 118-154 (260)
348 2pjd_A Ribosomal RNA small sub 32.3 29 0.00098 36.3 3.8 40 435-474 279-319 (343)
349 2hwk_A Helicase NSP2; rossman 32.2 19 0.00064 37.2 2.1 35 441-475 236-273 (320)
350 3njr_A Precorrin-6Y methylase; 32.1 40 0.0014 32.2 4.5 37 438-475 134-170 (204)
351 1o13_A Probable NIFB protein; 31.8 49 0.0017 29.9 4.8 38 680-717 67-104 (136)
352 3lpm_A Putative methyltransfer 30.9 34 0.0012 34.0 3.9 39 435-474 152-190 (259)
353 3hem_A Cyclopropane-fatty-acyl 30.8 27 0.00093 35.4 3.2 31 436-466 160-190 (302)
354 3sm3_A SAM-dependent methyltra 30.8 24 0.00083 33.8 2.7 27 436-462 118-144 (235)
355 3bgv_A MRNA CAP guanine-N7 met 30.2 34 0.0012 35.0 3.9 29 434-462 130-158 (313)
356 1yo6_A Putative carbonyl reduc 30.1 90 0.0031 30.0 6.8 76 250-325 8-93 (250)
357 3ic5_A Putative saccharopine d 29.8 1.2E+02 0.004 25.2 6.8 49 269-322 30-78 (118)
358 2i5h_A Hypothetical protein AF 29.2 31 0.0011 33.6 3.0 26 381-406 142-167 (205)
359 3fpf_A Mtnas, putative unchara 29.2 33 0.0011 35.6 3.5 28 436-463 199-226 (298)
360 3ou2_A SAM-dependent methyltra 29.0 25 0.00084 33.3 2.4 26 437-462 124-149 (218)
361 2aot_A HMT, histamine N-methyl 28.9 24 0.00082 35.8 2.4 25 437-461 150-174 (292)
362 3e8s_A Putative SAM dependent 28.9 24 0.00083 33.5 2.3 26 437-462 130-155 (227)
363 4fgs_A Probable dehydrogenase 28.7 47 0.0016 33.8 4.6 31 669-699 29-63 (273)
364 3m6w_A RRNA methylase; rRNA me 28.4 34 0.0012 37.8 3.6 37 439-475 209-248 (464)
365 4g65_A TRK system potassium up 27.3 1.2E+02 0.004 33.3 7.8 64 252-319 9-74 (461)
366 2k1k_A Ephrin type-A receptor 27.1 45 0.0016 23.5 2.8 25 131-155 13-37 (38)
367 3t8y_A CHEB, chemotaxis respon 26.6 38 0.0013 30.7 3.1 69 253-324 10-82 (164)
368 4fzv_A Putative methyltransfer 26.5 28 0.00097 37.0 2.5 43 433-475 257-303 (359)
369 3g07_A 7SK snRNA methylphospha 26.5 32 0.0011 34.9 2.8 29 430-458 191-219 (292)
370 3h2b_A SAM-dependent methyltra 26.4 24 0.00081 33.3 1.7 26 437-462 119-144 (203)
371 2p8j_A S-adenosylmethionine-de 26.3 30 0.001 32.6 2.4 26 436-461 105-130 (209)
372 1ve3_A Hypothetical protein PH 26.1 33 0.0011 32.7 2.7 27 436-462 119-145 (227)
373 1zx0_A Guanidinoacetate N-meth 25.7 17 0.00057 35.6 0.5 29 435-463 146-174 (236)
374 3k6g_A Telomeric repeat-bindin 25.7 34 0.0011 29.5 2.2 29 356-384 66-94 (111)
375 3i9f_A Putative type 11 methyl 25.7 30 0.001 31.4 2.2 25 438-462 91-115 (170)
376 3lcc_A Putative methyl chlorid 25.5 25 0.00085 34.1 1.7 25 437-461 149-173 (235)
377 3g2m_A PCZA361.24; SAM-depende 25.5 31 0.0011 34.9 2.5 27 436-462 167-193 (299)
378 1qop_A Tryptophan synthase alp 25.4 3.6E+02 0.012 26.9 10.5 124 540-698 112-236 (268)
379 3l77_A Short-chain alcohol deh 25.1 2.1E+02 0.0072 27.3 8.5 76 250-325 7-92 (235)
380 4eez_A Alcohol dehydrogenase 1 24.9 4.7E+02 0.016 26.5 11.8 80 242-324 162-243 (348)
381 3ujc_A Phosphoethanolamine N-m 24.8 32 0.0011 33.7 2.4 27 436-462 136-162 (266)
382 3g7u_A Cytosine-specific methy 24.7 1.9E+02 0.0064 30.7 8.6 80 246-338 4-87 (376)
383 3dli_A Methyltransferase; PSI- 24.7 37 0.0013 33.0 2.8 25 437-461 118-142 (240)
384 2duy_A Competence protein come 24.5 12 0.00041 30.1 -0.7 37 359-404 21-57 (75)
385 2qe6_A Uncharacterized protein 24.4 33 0.0011 34.7 2.5 30 431-462 170-199 (274)
386 2c7p_A Modification methylase 24.0 1.7E+02 0.0059 30.3 8.0 69 244-322 11-80 (327)
387 2yut_A Putative short-chain ox 23.9 1.6E+02 0.0053 27.4 7.1 70 250-325 5-78 (207)
388 2gs9_A Hypothetical protein TT 23.8 33 0.0011 32.5 2.2 26 437-462 110-135 (211)
389 3nav_A Tryptophan synthase alp 23.8 5.1E+02 0.018 26.0 11.3 119 540-696 115-237 (271)
390 1g55_A DNA cytosine methyltran 23.7 1.3E+02 0.0044 31.5 7.0 71 245-321 3-76 (343)
391 3e23_A Uncharacterized protein 23.7 38 0.0013 32.1 2.6 24 436-459 118-141 (211)
392 3imf_A Short chain dehydrogena 23.6 1.5E+02 0.005 29.1 7.1 75 250-324 11-94 (257)
393 3bkw_A MLL3908 protein, S-aden 23.3 34 0.0012 33.0 2.2 26 437-462 122-147 (243)
394 2zfu_A Nucleomethylin, cerebra 23.3 36 0.0012 32.4 2.3 26 437-462 129-154 (215)
395 2fca_A TRNA (guanine-N(7)-)-me 23.2 68 0.0023 30.7 4.4 23 439-461 133-155 (213)
396 1fmc_A 7 alpha-hydroxysteroid 23.2 1.6E+02 0.0056 28.3 7.3 76 250-325 16-100 (255)
397 1ri5_A MRNA capping enzyme; me 23.2 41 0.0014 33.6 2.9 28 435-462 150-177 (298)
398 1lss_A TRK system potassium up 23.1 1.3E+02 0.0044 25.8 5.9 67 253-322 11-78 (140)
399 3twe_A Alpha4H; unknown functi 23.1 55 0.0019 20.5 2.2 22 431-452 6-27 (27)
400 3awd_A GOX2181, putative polyo 23.0 1.3E+02 0.0044 29.2 6.5 76 250-325 18-102 (260)
401 3bxo_A N,N-dimethyltransferase 23.0 34 0.0011 33.0 2.1 25 436-460 118-142 (239)
402 2p41_A Type II methyltransfera 22.8 1.1E+02 0.0037 31.5 6.0 23 440-462 172-194 (305)
403 3nkl_A UDP-D-quinovosamine 4-d 22.8 97 0.0033 27.2 5.1 102 252-362 10-126 (141)
404 2igt_A SAM dependent methyltra 22.7 74 0.0025 33.2 4.8 41 435-475 248-290 (332)
405 3c85_A Putative glutathione-re 22.6 1.1E+02 0.0037 28.3 5.6 66 253-322 46-114 (183)
406 3thr_A Glycine N-methyltransfe 22.3 42 0.0014 33.6 2.7 26 436-461 152-177 (293)
407 4gqb_A Protein arginine N-meth 22.2 1.1E+02 0.0039 35.0 6.5 69 245-319 359-434 (637)
408 3t4x_A Oxidoreductase, short c 22.1 2.2E+02 0.0076 27.9 8.2 73 250-324 15-96 (267)
409 3o26_A Salutaridine reductase; 22.1 1.9E+02 0.0063 28.8 7.7 76 250-325 17-103 (311)
410 3v8b_A Putative dehydrogenase, 22.0 2.2E+02 0.0076 28.4 8.2 75 250-324 33-116 (283)
411 3sju_A Keto reductase; short-c 22.0 2E+02 0.0068 28.6 7.8 76 250-325 29-113 (279)
412 1nt2_A Fibrillarin-like PRE-rR 22.0 31 0.0011 33.3 1.5 25 437-461 139-163 (210)
413 2ld4_A Anamorsin; methyltransf 21.9 31 0.0011 31.7 1.5 59 242-320 11-70 (176)
414 3e9n_A Putative short-chain de 21.8 1.2E+02 0.0042 29.3 6.1 71 250-324 10-86 (245)
415 1yb1_A 17-beta-hydroxysteroid 21.8 1.8E+02 0.006 28.8 7.3 75 250-324 36-119 (272)
416 2oxt_A Nucleoside-2'-O-methylt 21.7 79 0.0027 31.8 4.7 21 441-461 165-187 (265)
417 3zv4_A CIS-2,3-dihydrobiphenyl 21.7 1.9E+02 0.0064 28.8 7.6 75 250-325 10-91 (281)
418 3l4b_C TRKA K+ channel protien 21.6 1.2E+02 0.0042 28.9 5.9 67 252-322 6-74 (218)
419 1kpg_A CFA synthase;, cyclopro 21.6 41 0.0014 33.6 2.5 30 436-465 145-174 (287)
420 2ld4_A Anamorsin; methyltransf 21.6 48 0.0016 30.4 2.8 19 439-457 81-99 (176)
421 3o38_A Short chain dehydrogena 21.5 1.3E+02 0.0044 29.6 6.2 71 253-325 34-113 (266)
422 2g1u_A Hypothetical protein TM 21.3 98 0.0033 27.8 4.8 69 252-323 25-94 (155)
423 2b3t_A Protein methyltransfera 21.3 58 0.002 32.6 3.5 42 433-475 212-253 (276)
424 1wma_A Carbonyl reductase [NAD 21.0 2.3E+02 0.0077 27.4 7.9 76 250-325 9-94 (276)
425 3g5l_A Putative S-adenosylmeth 20.9 40 0.0014 32.9 2.2 26 437-462 123-148 (253)
426 1x19_A CRTF-related protein; m 20.7 61 0.0021 33.8 3.7 27 436-462 272-298 (359)
427 1zk4_A R-specific alcohol dehy 20.7 1.9E+02 0.0064 27.8 7.1 75 250-324 11-93 (251)
428 3qvo_A NMRA family protein; st 20.6 2.6E+02 0.0089 26.7 8.1 69 250-323 28-98 (236)
429 1xtp_A LMAJ004091AAA; SGPP, st 20.5 42 0.0014 32.6 2.3 25 436-460 174-198 (254)
430 3gaf_A 7-alpha-hydroxysteroid 20.5 1.9E+02 0.0065 28.3 7.2 76 250-325 17-101 (256)
431 3f9i_A 3-oxoacyl-[acyl-carrier 20.5 2.2E+02 0.0076 27.4 7.7 78 244-325 14-96 (249)
432 1yzh_A TRNA (guanine-N(7)-)-me 20.4 92 0.0031 29.5 4.7 24 438-461 135-158 (214)
433 2rhc_B Actinorhodin polyketide 20.4 2.5E+02 0.0087 27.7 8.2 75 250-324 27-110 (277)
434 3ckk_A TRNA (guanine-N(7)-)-me 20.2 42 0.0014 33.1 2.1 24 439-462 148-171 (235)
435 3vc1_A Geranyl diphosphate 2-C 20.2 41 0.0014 34.4 2.1 25 438-462 200-224 (312)
436 2b9e_A NOL1/NOP2/SUN domain fa 20.1 1.1E+02 0.0037 31.6 5.4 36 439-475 215-253 (309)
437 3lyl_A 3-oxoacyl-(acyl-carrier 20.1 2.7E+02 0.0091 26.7 8.2 76 250-325 10-94 (247)
438 3lst_A CALO1 methyltransferase 20.1 68 0.0023 33.4 3.9 25 437-461 264-288 (348)
439 3p9n_A Possible methyltransfer 20.1 78 0.0027 29.3 4.0 24 436-459 128-153 (189)
440 3g5t_A Trans-aconitate 3-methy 20.0 40 0.0014 34.1 2.0 25 437-461 127-151 (299)
441 2fk8_A Methoxy mycolic acid sy 20.0 50 0.0017 33.7 2.7 29 436-464 171-199 (318)
No 1
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=100.00 E-value=8.4e-98 Score=788.46 Aligned_cols=280 Identities=49% Similarity=0.797 Sum_probs=250.4
Q ss_pred HhhhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccch
Q psy2380 223 IMGFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL 302 (733)
Q Consensus 223 ll~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~ 302 (733)
.=.|||++|+++.+.+ +|+++|||||||+||||.+||++++|+|+|||||+||+|++.|++|.++|++++|+||+++
T Consensus 40 ~H~pVLl~Evl~~L~i---~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 40 KHTTVLLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSAL 116 (347)
T ss_dssp --CCTTTHHHHHHTCC---CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGH
T ss_pred CcccccHHHHHHhhCC---CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHH
Confidence 3569999999999998 8999999999999999999999999999999999999999999888778999999999999
Q ss_pred HHHHHhCCCC-cccEEEEcCCCCccccCCCCCCcccCCCCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHcCCCchHH
Q psy2380 303 DIILKKYNIK-KIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAK 381 (733)
Q Consensus 303 ~~~l~~~~~~-~~dgil~DLGvss~q~~~~~rGfs~~~~~pLDmRm~~~~~~~a~~~~n~~~~~~l~~i~~~ygee~~~~ 381 (733)
.+++++.|+. ++|||||||||||||||+++|||||++|||||||||+++++||+||||+|||+||++||++|||||+|+
T Consensus 117 ~~~L~~~g~~~~vDgILfDLGVSS~QlD~~eRGFSf~~dgPLDMRMd~~~~~tAadvvn~~~e~eLa~Il~~YGEEr~a~ 196 (347)
T 3tka_A 117 GEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAK 196 (347)
T ss_dssp HHHHHHTTCTTCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSCTTSSCCHHHHHHHCCHHHHHHHHHHHHCCTTHH
T ss_pred HHHHHhcCCCCcccEEEECCccCHHHhcCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHhhCCHHHHHHHHHHhcCcchHH
Confidence 9999999986 699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCHHHHHHHHHhhcCCCCCCCCchhHHHHHHHHHHhhhHHHHHHHHHHHHhccccCCeEEEEecc
Q psy2380 382 KIAKEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 382 ~ia~~i~~~r~~~~~~tt~~l~~~i~~~~~~~~~~~~~~~~~FqalRi~vN~El~~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
+||++||++|+++||+||.||+++|++++|.+.+++||||||||||||+||+||++|+++|++++++|+|||||+|||||
T Consensus 197 rIA~aIv~~R~~~pi~tT~~La~ii~~a~p~~~~~~hpAtrtFQALRI~VN~EL~~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 197 RIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHSCCCBHHHHHHHHHHHSCCC----CTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHhcCCCCcHHHHHHHHHHhCCccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 99999999999999999999999999999976667899999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHhcCCCCCCCCCCCccccCC----ccccccc-ccccccc
Q psy2380 462 SLEDRIVKNFINFNTKIPHIDRRLPIYNYLF----EPKMKFL-ARCKPKK 506 (733)
Q Consensus 462 SlEdr~vk~~~~~~~~~~~~~~~~~~~~~~~----~~~~k~~-~~i~pse 506 (733)
||||||||+||+++++.|.||+++|+|.|.. .+.++++ | |.|++
T Consensus 277 SLEDRiVK~~f~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~i~k-i~ps~ 325 (347)
T 3tka_A 277 SLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGK-LMPGE 325 (347)
T ss_dssp HHHHHHHHHHHHHTTCC-------------------CCEEEEEE-ECCCH
T ss_pred chhHHHHHHHHHHhccCCCCCccCCccccccccccCcceeeecC-cCcCH
Confidence 9999999999999999999999999998766 4567777 5 87775
No 2
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=100.00 E-value=3.3e-89 Score=709.59 Aligned_cols=242 Identities=40% Similarity=0.644 Sum_probs=233.8
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHH
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI 304 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~ 304 (733)
.|||++|+++.+.+ +++++|||||+|+||||.+||++ +++|+|||+||+|++.|++|.++|++++|+||+++++
T Consensus 7 ~pVLl~e~le~L~~---~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~ 80 (285)
T 1wg8_A 7 VPVLYQEALDLLAV---RPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR 80 (285)
T ss_dssp CCTTHHHHHHHHTC---CTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH
T ss_pred hhHHHHHHHHhhCC---CCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHH
Confidence 59999999999998 89999999999999999999997 6899999999999999955755799999999999999
Q ss_pred HHHhCCCCcccEEEEcCCCCccccCCCCCCcccCCCCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHcCCCchHHHHH
Q psy2380 305 ILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEERFAKKIA 384 (733)
Q Consensus 305 ~l~~~~~~~~dgil~DLGvss~q~~~~~rGfs~~~~~pLDmRm~~~~~~~a~~~~n~~~~~~l~~i~~~ygee~~~~~ia 384 (733)
++++.|++++|||||||||||+|+|+++|||||++||||||||| ++++||+||||+||++||++||++|||||+|++||
T Consensus 81 ~L~~~g~~~vDgIL~DLGvSS~Qld~~~RGFSf~~d~pLDMRMd-~~~~tA~~~vn~~~~~~L~~i~~~yGee~~a~~iA 159 (285)
T 1wg8_A 81 HLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMG-LEGPTAKEVVNRLPLEALARLLRELGEEPQAYRIA 159 (285)
T ss_dssp HHHHTTCSCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSS-SCSCCHHHHHHHSCHHHHHHHHHHHHCCTTHHHHH
T ss_pred HHHHcCCCCcCEEEeCCccccccccccccCccccCCCcchhhcC-CCCCcHHHHHhhCCHHHHHHHHHHhcCHhHHHHHH
Confidence 99999998999999999999999999999999999999999999 88999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCHHHHHHHHHhhcCCCCCCCCchhHHHHHHHHHHhhhHHHHHHHHHHHHhccccCCeEEEEeccchh
Q psy2380 385 KEIVHYRSITPITRTKQLVEIILKSIRGNKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVVISFHSLE 464 (733)
Q Consensus 385 ~~i~~~r~~~~~~tt~~l~~~i~~~~~~~~~~~~~~~~~FqalRi~vN~El~~l~~~l~~~~~~l~~gg~l~visfhSlE 464 (733)
++|+++|+++||+||.||+++|++++|. ++++||||||||||||+||+||++|+++|++++++|+|||||+||||||||
T Consensus 160 ~~Iv~~R~~~pi~tt~~L~~ii~~~~p~-~~~~hpatr~FQAlRI~VN~EL~~L~~~L~~a~~~L~~gGrl~visfHSLE 238 (285)
T 1wg8_A 160 RAIVAAREKAPIETTTQLAEIVRKAVGF-RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLE 238 (285)
T ss_dssp HHHHHHHHHSCCCBHHHHHHHHHHHHCC-CSSSCTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHEEEEEEEEEEECSHHH
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHcCC-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCcHH
Confidence 9999999999999999999999999996 356899999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHh
Q psy2380 465 DRIVKNFINF 474 (733)
Q Consensus 465 dr~vk~~~~~ 474 (733)
|||||+||++
T Consensus 239 DRiVK~~~~~ 248 (285)
T 1wg8_A 239 DRVVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999997
No 3
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=100.00 E-value=6.3e-68 Score=564.99 Aligned_cols=243 Identities=44% Similarity=0.689 Sum_probs=230.5
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccc
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTE 301 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~ 301 (733)
.||+++|+++.+.+ ++++.|+|+|+|.||||.++++++ ++++|+|+|+|++|++.|+ ++. ++|+++++++|.+
T Consensus 11 ~pvLl~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 11 IPVMVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE 86 (301)
T ss_dssp CCTTHHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG
T ss_pred cHHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence 58999999999988 889999999999999999999997 4789999999999999994 564 3799999999999
Q ss_pred hHHHHHhCCCCcccEEEEcCCCCccccCCCCCCcccCCCCCccccCCCCCCCCHHHHHhccCHHHHHHHHHHcCCC-chH
Q psy2380 302 LDIILKKYNIKKIDGILFDLGISSNQINNELRGFSFLLDGPLDMRMDITRGISASKWLANATEFNIKKVIQDYGEE-RFA 380 (733)
Q Consensus 302 ~~~~l~~~~~~~~dgil~DLGvss~q~~~~~rGfs~~~~~pLDmRm~~~~~~~a~~~~n~~~~~~l~~i~~~ygee-~~~ 380 (733)
+...+++.+..++|+|++|+|+||+|+|+++|||||..|+|||||||+..+.||++|+|++++++|++|+++|||| +++
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~gvSs~qld~~~rgfs~~~d~pLdmrm~~~~~~ta~~~l~~~~~~~L~~i~~~yGee~r~a 166 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFA 166 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECSCCHHHHHTSCSCSSSSSCCBSCCCSSTTSSCCHHHHHHHSCHHHHHHHHHHTTCCTTTH
T ss_pred HHHHHHhcCCCCCCEEEEcCccchhhhcccccceEEeecccceeccCCccCccHHHHHhcCCHHHHHHHHHHhCccHHHH
Confidence 9988888777789999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhccCCCCCHHHHHHHHHhhcCC---CCCCCCchhHHHHHHHHHHhhhHHHHHHHHHHHHhccccCCeEEE
Q psy2380 381 KKIAKEIVHYRSITPITRTKQLVEIILKSIRG---NKRYKNPATRTFQAIRIYINQELKNLSIALKIGFKKLNIKGRIVV 457 (733)
Q Consensus 381 ~~ia~~i~~~r~~~~~~tt~~l~~~i~~~~~~---~~~~~~~~~~~FqalRi~vN~El~~l~~~l~~~~~~l~~gg~l~v 457 (733)
++||++|+++| ||+||.||+++|++++|. +++++|||||+||||||+||+||++|+++|++++++|+||||++|
T Consensus 167 ~~ia~aIv~~r---pi~tt~~L~~ii~~~~p~~~~~~~~~~pa~r~fQalRi~vn~el~~l~~~l~~~~~~l~~ggr~~v 243 (301)
T 1m6y_A 167 RRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVV 243 (301)
T ss_dssp HHHHHHHHHTC---SCCBHHHHHHHHHHHSCHHHHHHCSSCTTHHHHHHHHHHHHTHHHHHHHHHHHGGGGEEEEEEEEE
T ss_pred HHHHHHHHHcC---CCCCHHHHHHHHHHHCCcccccccCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCEEEE
Confidence 99999999998 999999999999999985 234689999999999999999999999999999999999999999
Q ss_pred EeccchhhhHHHHHHHh
Q psy2380 458 ISFHSLEDRIVKNFINF 474 (733)
Q Consensus 458 isfhSlEdr~vk~~~~~ 474 (733)
||||||||||||+||++
T Consensus 244 isfhsledr~vk~~~~~ 260 (301)
T 1m6y_A 244 ISFHSLEDRIVKETFRN 260 (301)
T ss_dssp EESSHHHHHHHHHHHHH
T ss_pred EecCcHHHHHHHHHhhc
Confidence 99999999999999997
No 4
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=100.00 E-value=1.1e-55 Score=457.55 Aligned_cols=214 Identities=45% Similarity=0.765 Sum_probs=194.8
Q ss_pred cCccccCCCCCcceeecCCCCccEEEEEEeCCHHHHHHHHHCCCCEEEeccCCCc-cCCcccccChHHHHHHHHHhcCCe
Q psy2380 508 LNIKKYEDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFW-KGENSNIVGIKKKRLEQLIINKIN 586 (733)
Q Consensus 508 ~~~~~~~~wdn~Gl~~~~~~~v~~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f-~~~~~~~~~~~~~~~~~l~~~~I~ 586 (733)
+++..+++|||+|||++++++|++|++|+|+|++|+++|+++||||||||||+|| ++.+. .++.+++++.+|++|||+
T Consensus 14 ~p~~~~~~~d~~GL~v~~~~~V~~I~~~lD~t~~vi~eAi~~~adlIitHHP~~f~~~~~~-i~~~~~~~i~~li~~~I~ 92 (247)
T 1nmo_A 14 LNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPV-IRGMKRNRLKTLLANDIN 92 (247)
T ss_dssp TTCTTSCCSSCCEEEECCCSBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTSCCC-CCTHHHHHHHHHHHTTCE
T ss_pred CChhhhCCcCCCeeEECCCCccCEEEEEEcCCHHHHHHHHhCCCCEEEECCchhccCCCcc-ccchHHHHHHHHHHCCCE
Confidence 3344457999999999888999999999999999999999999999999999999 55544 456678999999999999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHhccCccccccccCccceeeeecccccccCCCCCHHHHHHHHHhHcCCCcEEeCCC-C
Q psy2380 587 LYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDL-N 665 (733)
Q Consensus 587 vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~~~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~~~~-~ 665 (733)
+|++|||||.+++.|+|++||+.|||++.++++ |+|++|+ +++|+|++||++++|++|+.+.+++++. +
T Consensus 93 ly~~HtnlD~~~~~G~n~~La~~Lgl~~~~~~~--g~G~ig~--------l~~~~t~~~l~~~vk~~l~~~~~~~g~~~~ 162 (247)
T 1nmo_A 93 LYGWHLPLDAHPELGNNAQLAALLGITVMGEIE--PLVPWGE--------LTMPVPGLELASWIEARLGRKPLWCGDTGP 162 (247)
T ss_dssp EEECCHHHHHCTTTSHHHHHHHHHTEEEEEEEE--TTEEEEE--------EEEEECHHHHHHHHHHHHTSCCEEECTTSC
T ss_pred EEEeeechhhCCCCCHHHHHHHHcCCCCccccC--CeEEEEE--------eCCCCcHHHHHHHHHHHcCCCeEEECCCCc
Confidence 999999999997559999999999999988764 7999999 8889999999999999999875556764 4
Q ss_pred CceeEEEEeeCCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCChhhhHhhHhhhhcC
Q psy2380 666 KKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERYDKSPNREL 732 (733)
Q Consensus 666 ~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH~~sE~~g~~~la~~ 732 (733)
++|+|||+|+|||++++++|.++|||+|||||++||++++|+++|+++|++|||+||++|++.|+++
T Consensus 163 ~~i~~VAv~~GsG~~~~~~a~~~gaD~~iTGd~~~h~~~~a~e~gi~~i~~GH~~tE~~~~~~l~~~ 229 (247)
T 1nmo_A 163 EVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEW 229 (247)
T ss_dssp SSEEEEEECSSSCGGGHHHHHHHCCSEEEESCCCHHHHHHHHHTTCEEEECCHHHHTSHHHHHHHHH
T ss_pred CccCEEEEECCCcHHHHHHHHHcCCCEEEEcCccHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999988864
No 5
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=100.00 E-value=1.2e-55 Score=462.74 Aligned_cols=217 Identities=21% Similarity=0.308 Sum_probs=199.7
Q ss_pred cccccccccCccccCCCCCcceeec-CCCCccEEEEEEeCCHHHHHHHHHCCCCEEEeccCCCccCCccc-ccChHHHHH
Q psy2380 500 ARCKPKKKLNIKKYEDYCPNGLQVE-GRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSN-IVGIKKKRL 577 (733)
Q Consensus 500 ~~i~pse~~~~~~~~~wdn~Gl~~~-~~~~v~~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f~~~~~~-~~~~~~~~~ 577 (733)
+.+.|.+++ ++|||+|||+| ++++|++|++|+|+|++|+++|+++||||||||||+||++.++. ..+++++++
T Consensus 13 e~~~p~~~a-----~~~D~~GL~vG~~~~~V~~I~~alD~t~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i 87 (267)
T 2fyw_A 13 EAFCPQEFS-----MEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIY 87 (267)
T ss_dssp HHHSCGGGS-----CTTCCCEEEESCSSSBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHH
T ss_pred HHhCCHhHc-----CCCCCCeeEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccccCchHHHHH
Confidence 455666654 78999999997 57999999999999999999999999999999999999998876 447889999
Q ss_pred HHHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCccccccc----cCccceeeeecccccccCCCCCHHHHHHHHHhH
Q psy2380 578 EQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSK----NNIGWIGKIINLKRYNFKKIITIKDLFHHITRK 653 (733)
Q Consensus 578 ~~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~~----~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~ 653 (733)
.+|++|||+||++|||||.++ +|+|++||+.|||++.+++++ .|+|++|+ + +|+|++||++++|++
T Consensus 88 ~~li~~~I~lya~Ht~lD~~~-~G~n~~La~~Lgl~~~~~l~~~~~~~g~G~ig~--------l-~~~t~~el~~~vk~~ 157 (267)
T 2fyw_A 88 IDLIKHDIAVYVSHTNIDIVE-NGLNDWFCQMLGIEETTYLQETGPERGIGRIGN--------I-QPQTFWELAQQVKQV 157 (267)
T ss_dssp HHHHHTTCEEEECSHHHHHST-TSHHHHHHHHHTCEEEEEEEEEETTEEEEEEEE--------E-EEEEHHHHHHHHHHH
T ss_pred HHHHHCCCeEEEeeccccccC-CCHHHHHHHHcCCCcccccccCCCCCCeEEEEE--------e-ccCCHHHHHHHHHHH
Confidence 999999999999999999987 599999999999999988764 57999999 8 799999999999999
Q ss_pred cCCCcEEe-----CCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCChhhhHhhHhh
Q psy2380 654 IGKKPIVI-----GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERYDKSP 728 (733)
Q Consensus 654 l~~~~v~~-----~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH~~sE~~g~~~ 728 (733)
|+.+.+|+ ++.+++|+|||+|+|||++++++|.++|||+|||||++||++++|+++|+++|++||| ||++|++.
T Consensus 158 l~~~~vr~~~~~~g~~~~~I~rVAv~~GsG~~~~~~a~~~gaD~~ITGd~~~h~~~~A~e~gi~~i~~GH~-tE~~~~~~ 236 (267)
T 2fyw_A 158 FDLDSLRMVHYQEDDLQKPISRVAICGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHY-IEVIFVEK 236 (267)
T ss_dssp TTCSCCEEECSCTTGGGSEEEEEEEESSSCGGGHHHHHHTTCSEEEESCCCHHHHHHHHHTTCEEEECCGG-GGGHHHHH
T ss_pred cCCCeEEEEeccCCCCCCceeEEEEEcCCCHHHHHHHHHcCCCEEEEccCcHHHHHHHHHCCCeEEECCcH-HHHHHHHH
Confidence 99888888 4556789999999999999999999999999999999999999999999999999999 99999998
Q ss_pred hhcC
Q psy2380 729 NREL 732 (733)
Q Consensus 729 la~~ 732 (733)
|+++
T Consensus 237 l~~~ 240 (267)
T 2fyw_A 237 IAAL 240 (267)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 6
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=100.00 E-value=5.3e-55 Score=473.48 Aligned_cols=217 Identities=23% Similarity=0.374 Sum_probs=199.6
Q ss_pred cccccccccCccccCCCCCcceeec-CCCCccEEEEEEeCCHHHHHHHHHCCCCEEEeccCCCccCCcccc-cChHHHHH
Q psy2380 500 ARCKPKKKLNIKKYEDYCPNGLQVE-GRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI-VGIKKKRL 577 (733)
Q Consensus 500 ~~i~pse~~~~~~~~~wdn~Gl~~~-~~~~v~~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~-~~~~~~~~ 577 (733)
+.+.|.+++ |+|||+|||+| ++++|++|++|+|+|++|++||+++||||||||||+||+|.+++. +++ ++++
T Consensus 15 e~~~P~~~a-----e~wDn~GL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~~~-~r~i 88 (370)
T 2nyd_A 15 DHHVPFSTA-----ESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY-GLII 88 (370)
T ss_dssp HHHSCGGGS-----CTTCCCEEEESCTTSBCCCEEEESSCCHHHHHHHHHHTCCEEEESSCSSCSCCSCCCSSTH-HHHH
T ss_pred HHhCCHhHc-----CCCCcCeEEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcccCCccccCcCCH-HHHH
Confidence 556666654 79999999997 578999999999999999999999999999999999999998774 468 9999
Q ss_pred HHHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCccccccc-------------------------------------
Q psy2380 578 EQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSK------------------------------------- 620 (733)
Q Consensus 578 ~~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~~------------------------------------- 620 (733)
.+|++|||+|||+|||||+++ +|+|+|||+.|||++.+++.+
T Consensus 89 ~~li~~~Ialya~HTnlD~~~-~GvNd~LA~~Lgl~~~~~l~~~~~~~~kl~v~vP~~~~~~v~~al~~aGag~ig~Y~~ 167 (370)
T 2nyd_A 89 RKLIQHDINLIAMHTNLDVNP-YGVNMMLAKVMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEY 167 (370)
T ss_dssp HHHHHTTCEEEECCHHHHTST-TSHHHHHHHHTTCEEEEECSEEEEEEEEEC----------------------------
T ss_pred HHHHHCCCeEEEeechhhccC-CcHHHHHHHHcCCCcccccCccccccceeEEecchhhHHHHHHHHHhccccccccccc
Confidence 999999999999999999997 699999999999998766542
Q ss_pred ------------------------------------------------------------------------cCccceee
Q psy2380 621 ------------------------------------------------------------------------NNIGWIGK 628 (733)
Q Consensus 621 ------------------------------------------------------------------------~~~G~ig~ 628 (733)
.|+||+|+
T Consensus 168 csf~~~G~G~F~p~~~a~P~ig~~g~~~~v~e~rie~i~~~~~~~~v~~al~~~hpyee~ayd~~~l~~~~~~GlGriG~ 247 (370)
T 2nyd_A 168 CFFESEGRGQFKPVGEANPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGVMAE 247 (370)
T ss_dssp -----------------------------------CEEECSTHHHHHHHHHCC-----CCCCCEEEEEEEEEEESCEEEE
T ss_pred ceecccccceeccccccCCccccccccccccceEEEEEechhhHHHHHHHHHhhCCccccccccccccccCCCCeEEEEE
Confidence 36899999
Q ss_pred eecccccccCCCCCHHHHHHHHHhHcCCCcEEe-CCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCChhHHHHHH
Q psy2380 629 IINLKRYNFKKIITIKDLFHHITRKIGKKPIVI-GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISR 707 (733)
Q Consensus 629 ~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~-~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~ 707 (733)
+++|+|++||++++|++|+++.+|+ ++.+++|+|||+|+|||+++++.|.+.|||+|||||+|||++++|.
T Consensus 248 --------L~~p~tl~~~~~~vk~~l~~~~vr~~g~~~~~I~~VAvc~GsG~~~i~~a~~~gaDvyITGD~~~H~~~~A~ 319 (370)
T 2nyd_A 248 --------VDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAK 319 (370)
T ss_dssp --------EEEEEEHHHHHHHHHHHTTCSCCEEESCTTCEEEEEEECCSCCTTSHHHHHHTTCSEEEESCCCHHHHHHHH
T ss_pred --------cCCCCCHHHHHHHHHHHcCCCceEEecCCCCcccEEEEEcCCCHHHHHHHHHcCCCEEEeCCccHHHHHHHH
Confidence 9999999999999999999999998 6667789999999999999999999999999999999999999999
Q ss_pred HCCCeEEEeCChhhhHhhHhhhhcC
Q psy2380 708 ESGVAYFAAGHHATERYDKSPNREL 732 (733)
Q Consensus 708 ~~g~~li~~gH~~sE~~g~~~la~~ 732 (733)
++|+++||+|||+|| ++++.|+++
T Consensus 320 ~~gi~vid~GH~~tE-~~~~~l~~~ 343 (370)
T 2nyd_A 320 IHGVNLIDINHYSEY-VMKEGLKTL 343 (370)
T ss_dssp HTTCCEEECCGGGGG-GHHHHHHHH
T ss_pred HCCCcEEEcCchHHH-HHHHHHHHH
Confidence 999999999999999 999988764
No 7
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=3.6e-55 Score=452.17 Aligned_cols=212 Identities=29% Similarity=0.456 Sum_probs=194.4
Q ss_pred cccccccccCccccC-CCCCcceeecCCCCccEEEEEEeCCHHHHHHHHHCCCCEEEeccCCCccCCcccccChHHHHHH
Q psy2380 500 ARCKPKKKLNIKKYE-DYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLE 578 (733)
Q Consensus 500 ~~i~pse~~~~~~~~-~wdn~Gl~~~~~~~v~~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~~~~~~~~~~ 578 (733)
+...|.+++ + +|||+|||++++++|++|++|+|+|++|+++|+++||||||||||+|| +.++..++++++++.
T Consensus 11 e~~~p~~~~-----~~~~d~~GL~veG~~~V~~I~~alD~t~~vi~eAi~~~adlIitHHp~~f-~~~~~~~~~~~~~i~ 84 (242)
T 2yyb_A 11 DAYLRIQDF-----PQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFW-GKPFPIVGHHKRRLE 84 (242)
T ss_dssp HHHTTGGGC-----TTCSSCCEEEECCCSBCCCEEEEEECSHHHHHHHHHTTCSEEEEEECSCS-SCCCCSCHHHHHHHH
T ss_pred HHhCCHhhh-----ccCCCCCeEEEcCCcccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcCc-CcccccccHHHHHHH
Confidence 445555554 7 899999999545999999999999999999999999999999999999 888776678899999
Q ss_pred HHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCccccccccCccceeeeecccccccCCCCCHHHHHHHHHhHcCCCc
Q psy2380 579 QLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKP 658 (733)
Q Consensus 579 ~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~~~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~ 658 (733)
+|++|||++|++|||||.++..|+|++||+.|||++.+++ ++|++|+ +++|+|++||++++|++|+ +.
T Consensus 85 ~li~~~I~ly~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~l---~~G~ig~--------l~~~~t~~~l~~~vk~~l~-~~ 152 (242)
T 2yyb_A 85 TLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVDLTPW---DVGVKGR--------FPQPTPLLQVADRLGQLTG-MQ 152 (242)
T ss_dssp HHHHTTCEEEECSHHHHHCTTTCHHHHHHHTTTCCSCCCC---STTCCCC--------CCCCSCBSTHHHHHHHTTS-SC
T ss_pred HHHHCCCeEEEeccHHhcCCCcCHHHHHHHHcCCCCCccc---eeEEEEE--------eCCCcCHHHHHHHHHHHcc-cC
Confidence 9999999999999999999744999999999999998876 4899999 8889999999999999999 88
Q ss_pred EEe-CCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCChhhhHhhHhhhhcC
Q psy2380 659 IVI-GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGHHATERYDKSPNREL 732 (733)
Q Consensus 659 v~~-~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH~~sE~~g~~~la~~ 732 (733)
+|+ ++.+++|+|||+|+|||++++++| |||+|||||++||++++|+++|+++|++|||+||++|++.|+++
T Consensus 153 vr~~g~~~~~i~~VAv~~GsG~~~~~~a---gaD~~iTGd~~~h~~~~A~e~gi~~i~~GH~~tE~~~~~~l~~~ 224 (242)
T 2yyb_A 153 PLVHQGGLDHVETVILVSGSGTGLLPKV---DADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAAH 224 (242)
T ss_dssp CEEEESSCSBCCCEEEECSSCGGGGGGC---CSSEEEESCCCGGGHHHHHHTTCEEEECCHHHHTTHHHHHHHHH
T ss_pred eEEecCCCCceeEEEEEcCCCHHHHHHc---CCCEEEEecCCHHHHHHHHHCCCeEEECCcHHHHHHHHHHHHHH
Confidence 888 666778999999999999999887 99999999999999999999999999999999999999998864
No 8
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=100.00 E-value=9.5e-55 Score=474.36 Aligned_cols=218 Identities=20% Similarity=0.302 Sum_probs=199.7
Q ss_pred cccccccccCccccCCCCCcceeec-CCCCccEEEEEEeCCHHHHHHHHHCCCCEEEeccCCCccCCcccc-cChHHHHH
Q psy2380 500 ARCKPKKKLNIKKYEDYCPNGLQVE-GRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNI-VGIKKKRL 577 (733)
Q Consensus 500 ~~i~pse~~~~~~~~~wdn~Gl~~~-~~~~v~~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~-~~~~~~~~ 577 (733)
+.+.|.+++ |+|||+|||+| ++++|++|++|+|+|++|++||+++||||||||||+||+|.+++. ++++++++
T Consensus 39 e~~aP~~la-----e~wDnvGL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~~~~r~i 113 (397)
T 2gx8_A 39 ESMYPKHLA-----MEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKII 113 (397)
T ss_dssp HHHSCGGGS-----CTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHH
T ss_pred HHhCCHhHc-----CCCCCCeeEeCCCccccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccCcCcHHHHHH
Confidence 556666664 79999999997 578999999999999999999999999999999999999998774 47889999
Q ss_pred HHHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCccccccc-------------------------------------
Q psy2380 578 EQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSK------------------------------------- 620 (733)
Q Consensus 578 ~~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~~------------------------------------- 620 (733)
.+|++|||+|||+|||||+++ +|+|+|||+.|||++.+++.+
T Consensus 114 ~~li~~~Iavya~HTnlD~~~-~GvNd~LA~~LGl~~~~~L~~~~~~~~~Kl~v~vp~~~~~~v~~al~~aGag~ig~y~ 192 (397)
T 2gx8_A 114 EKCIKNDIAIYAAHTNVDVAK-GGVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGHIGNYS 192 (397)
T ss_dssp HHHHHTTCEEEECCHHHHHST-TSHHHHHHHHTTCEEEEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHTTTTCBTTEE
T ss_pred HHHHHCCCeEEEeechhhcCC-CCHHHHHHHHcCCCcccccCcccccccceeeEeccchhhHHHHHHhhhcccccccccc
Confidence 999999999999999999987 699999999999997654321
Q ss_pred --------------------------------------------------------------------------cCccce
Q psy2380 621 --------------------------------------------------------------------------NNIGWI 626 (733)
Q Consensus 621 --------------------------------------------------------------------------~~~G~i 626 (733)
.|+||+
T Consensus 193 ~csf~~~G~G~F~p~~~a~P~iG~~g~~~~v~e~rie~i~p~~~~~~v~~al~~~HPyee~ayd~~~l~~~~~~~GlGri 272 (397)
T 2gx8_A 193 HCTFSSEGTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETLGLGKI 272 (397)
T ss_dssp EEEEEEEEEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHSSSSSCCEEEEEEEEEEEEEEEEEE
T ss_pred ccccccccceeeccccCCCCccCCcCcccccceeEEEEEecHHHHHHHHHHHHHhCCcccccccccccccccccCCeEEE
Confidence 368899
Q ss_pred eeeecccccccCCCCCHHHHHHHHHhHcCCCcEEe-CCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCChhHHHH
Q psy2380 627 GKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVI-GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEISESTVYI 705 (733)
Q Consensus 627 g~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~-~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~ 705 (733)
|+ +++|+|++||++++|++|+++.+|+ ++.+++|+|||+|+|||+++++.|.++|||+|||||++||++++
T Consensus 273 G~--------L~~p~tl~~f~~~vk~~L~~~~vr~~g~~~~~I~rVAvc~GSG~~~i~~A~~~gaDvyITGD~~~H~a~d 344 (397)
T 2gx8_A 273 GY--------LQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHD 344 (397)
T ss_dssp EE--------EEEEEEHHHHHHHHHHHTTCSCCEEESCTTSEEEEEEEEEEECGGGHHHHHHTTCSEEEEECCCHHHHHH
T ss_pred EE--------cCCCCCHHHHHHHHHHHcCCCceEEECCCCCceeEEEEEcCCcHHHHHHHHHCCCCEEEecCCcHHHHHH
Confidence 98 8999999999999999999999998 66677899999999999999999999999999999999999999
Q ss_pred HHHCCCeEEEeCChhhhHhhHhhhhcC
Q psy2380 706 SRESGVAYFAAGHHATERYDKSPNREL 732 (733)
Q Consensus 706 A~~~g~~li~~gH~~sE~~g~~~la~~ 732 (733)
|.++|+++||+|||+|| ++++.|+++
T Consensus 345 A~e~Gi~vId~GH~~sE-~~~~~l~~~ 370 (397)
T 2gx8_A 345 AMMLGLNIVDPGHNVEK-VMKQGVQKQ 370 (397)
T ss_dssp HHHHTCEEEECCGGGGG-HHHHHHHHH
T ss_pred HHHCCCcEEEcCchHHH-HHHHHHHHH
Confidence 99999999999999999 999988764
No 9
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=99.97 E-value=2.7e-30 Score=261.21 Aligned_cols=194 Identities=14% Similarity=0.191 Sum_probs=149.8
Q ss_pred CCCCCcceeecCCCCccEEEEEEeCCHHHHHHHHHCCCCEEEeccCCCccCCc---ccc---------cC-h-------H
Q psy2380 514 EDYCPNGLQVEGRSNINVIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGEN---SNI---------VG-I-------K 573 (733)
Q Consensus 514 ~~wdn~Gl~~~~~~~v~~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f~~~~---~~~---------~~-~-------~ 573 (733)
|+|||+|||+ .+++|++|++|||+|++++++|+++||||||||||++|.+.. ... .+ | .
T Consensus 24 e~~dd~Gllv-~~~eV~kIlvaLD~t~~vv~eA~~~g~dlIItHHP~~~~~~~~~~~V~~~q~d~~~~~Gvpin~ae~~~ 102 (278)
T 3rxy_A 24 TLPADSAVYV-ESTDLKRVMMGIDIGPAELLLARQLGCDGVIAHHPAGGSATLNFPEVLTRHVELMVEHGVPATAARDAI 102 (278)
T ss_dssp SCCTTCEEEE-CCSCBSEEEEESSCCHHHHHHHHHTTCSEEEESSCCSHHHHHHGGGGGGHHHHHHHHTTCCHHHHHHHH
T ss_pred cCCCCceeee-ccccccEEEEEECCCHHHHHHHHHcCCCEEEECCCcchhhhhhHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 6999999999 899999999999999999999999999999999999998210 000 00 0 0
Q ss_pred H----------------HHHHHHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCccccccccCccceeeeeccccccc
Q psy2380 574 K----------------KRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFSKNNIGWIGKIINLKRYNF 637 (733)
Q Consensus 574 ~----------------~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~~~~~G~ig~~~~~~~~~l 637 (733)
. +.+....=-++...++||+.|.. +...|-+.+.-. ++ + .
T Consensus 103 ~~r~~ev~r~~~~~N~~r~v~~Arll~~p~m~~H~paD~~----~~~~l~~~~~~~---------~~---~--------~ 158 (278)
T 3rxy_A 103 QGLLTRSLLRAQSANHDHTPSVARLLEMPFLNIHLPLDEV----GRRIMVKTIQEA---------VE---P--------L 158 (278)
T ss_dssp HHHHHHHHHHHHHSCTTHHHHHHHHHTCCEEECCHHHHHH----HHHHHHHHHHHH---------HG---G--------G
T ss_pred HHHHHHHHHhcccccccccccHHHHhCCcceecCcchHHH----HHHHHHHHHhhh---------hh---c--------c
Confidence 0 12222333589999999999975 577777766400 00 0 1
Q ss_pred CCCCCHHHHHHHHHhHc------CCCcEEeCCCCCceeEEEEeeCCc----hhHHHHhhhCCCcEEEEccCChhHH-HHH
Q psy2380 638 KKIITIKDLFHHITRKI------GKKPIVIGDLNKKIYEIGWCTGAA----QNLLTDAINEGVTAYISGEISESTV-YIS 706 (733)
Q Consensus 638 ~~~~s~~el~~~lk~~l------~~~~v~~~~~~~~v~rVai~~GsG----~~~i~~a~~~g~D~~ITGd~~~h~~-~~A 706 (733)
..+-|+.|+++.+++.= ..+.+.+++++++++||||++|+| .+.++++.++|+|+|||||++|+.+ ..|
T Consensus 159 ~p~~t~~dvi~~L~~ipEy~~a~~~p~I~~g~~~~~vgkIaV~~GgGtsG~~~~i~~a~~~GvDt~ITGe~~~~~~~~~A 238 (278)
T 3rxy_A 159 GDEARVQDAIDALMTLPEFAGAATRIMVPVGAVDQPLGKIAVVHGAGTNGGYAVARAYFDHGVRTVLYIHIAPEEAERLR 238 (278)
T ss_dssp GGGCBHHHHHHHHTTSHHHHSCSSCCEEEESCTTSBCCSEEECCSSSSCCHHHHHHHHHHTTCCEEEESCCCHHHHHHHH
T ss_pred CccchHHHHHHHHHhCchhhhcCCCCEEEeCCCCCcCCEEEEEcCCCCCCcHHHHHHHHHcCCCEEEEecCchHHHHHHH
Confidence 11246677776665421 235677788889999999999944 4679999999999999999999999 999
Q ss_pred HHCCCeEEEeCChhhhHhhHhhhhcC
Q psy2380 707 RESGVAYFAAGHHATERYDKSPNREL 732 (733)
Q Consensus 707 ~~~g~~li~~gH~~sE~~g~~~la~~ 732 (733)
.+.|+++|.+|||+||.+|++.|++.
T Consensus 239 ~E~ginVI~AGHyATEt~Gv~aL~~~ 264 (278)
T 3rxy_A 239 REGGGNLIVTGHIASDLVGINRYVQA 264 (278)
T ss_dssp HHCSSEEEECCHHHHHHHHHHHHHHH
T ss_pred HHcCCeEEEeccchHhHHHHHHHHHH
Confidence 99999999999999999999998763
No 10
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.03 E-value=5.9e-10 Score=123.74 Aligned_cols=122 Identities=8% Similarity=0.093 Sum_probs=98.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCcccccccCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q psy2380 2 AFAVVLGGALQIIIQIPSLIKIGMFPHIKLNPS-HGFKNIAVRRILKKMGPSVFSVFAAQISLMLNTNIASQMREGSLSC 80 (733)
Q Consensus 2 a~G~~~G~v~qll~l~~~l~r~g~~~~~~~rp~-~~~~~~~lk~ll~l~iPiil~~~v~qi~~~iD~~ias~l~~g~v~~ 80 (733)
++|++++.+++.++++++++|.+...+.+..++ ..++.+.+|+++++++|.++++.+.++...+|+.+++.+++.++++
T Consensus 196 a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~ 275 (460)
T 3mkt_A 196 GVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAA 275 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 567888888888888888776543222111111 1233467899999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCHHHHHHHhh
Q psy2380 81 LSYADRLMEFPTTLLGVTFNTILLPNLSKARIENNTEEYSAILD 124 (733)
Q Consensus 81 l~~A~~L~~lP~~i~~~ai~tvllP~lS~~~a~~d~~~~~~~l~ 124 (733)
|+.++++.+++. .+..+++++..|.+++...++|.+++++...
T Consensus 276 ~~i~~~i~~~~~-~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~ 318 (460)
T 3mkt_A 276 HQVALNFSSLVF-MFPMSIGAAVSIRVGHKLGEQDTKGAAIAAN 318 (460)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCCCTTTTHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999997 5679999999999999999999888665554
No 11
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.64 E-value=7.7e-08 Score=94.55 Aligned_cols=78 Identities=22% Similarity=0.470 Sum_probs=67.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
++++.++|...|.|..+..+++.+++.++++|+|.++++++.|+ ++. .++++++++++.++....+ +++|.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYID----CPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCC----SCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhcc----CCceE
Confidence 57889999999999999999999877889999999999999994 443 3689999999988765332 47999
Q ss_pred EEEcCCC
Q psy2380 317 ILFDLGI 323 (733)
Q Consensus 317 il~DLGv 323 (733)
|++|+++
T Consensus 97 v~~~~~~ 103 (197)
T 3eey_A 97 VMFNLGY 103 (197)
T ss_dssp EEEEESB
T ss_pred EEEcCCc
Confidence 9999988
No 12
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=98.49 E-value=1.5e-06 Score=96.06 Aligned_cols=142 Identities=13% Similarity=0.164 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCHHHH
Q psy2380 40 IAVRRILKKMGPSVFSVFAAQISLMLNTNIASQMREGSLSCLSYADRLMEFPTTLLGVTFNTILLPNLSKARIENNTEEY 119 (733)
Q Consensus 40 ~~lk~ll~l~iPiil~~~v~qi~~~iD~~ias~l~~g~v~~l~~A~~L~~lP~~i~~~ai~tvllP~lS~~~a~~d~~~~ 119 (733)
+..|+++++++|.++++.+.+++.++|+.+.+.+++.++++++.+.++..+.. .+...+++++.|.+|+...++|+++.
T Consensus 9 ~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~~-~~~~g~~~~~~~~is~~~g~~~~~~~ 87 (460)
T 3mkt_A 9 KEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSI-LFGVGLLMALVPVVAQLNGAGRQHKI 87 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHHH-HHHHHHHHHHGGGCTTTTSSSSTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCChhHH
Confidence 67899999999999999999999999999999888899999999999977764 46789999999999999988888876
Q ss_pred HHHhhh--------------------------------------------------------------------------
Q psy2380 120 SAILDW-------------------------------------------------------------------------- 125 (733)
Q Consensus 120 ~~~l~~-------------------------------------------------------------------------- 125 (733)
++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 167 (460)
T 3mkt_A 88 PFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGF 167 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 665531
Q ss_pred -------------c------chhHhHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------cCchhhHHHHHHHHHHH
Q psy2380 126 -------------I------PIFAHSGLALSIGLGACLHASFLYWYLRHKRIY----------IPCAGWGVFFIRLVIAL 176 (733)
Q Consensus 126 -------------i------p~~Gi~GaalAt~is~~v~~iL~~~~l~r~i~~----------~~~~~~~~~~~k~~lAs 176 (733)
+ |.+|+.|+++|++++.++.+++.++.++|+.+. .......+.+++..+..
T Consensus 168 ~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 247 (460)
T 3mkt_A 168 IGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPV 247 (460)
T ss_dssp HHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHhhHH
Confidence 1 358999999999999999999998888876432 11223345555655555
Q ss_pred HHHHHH
Q psy2380 177 LLLVIV 182 (733)
Q Consensus 177 ~iM~iv 182 (733)
.++.+.
T Consensus 248 ~~~~~~ 253 (460)
T 3mkt_A 248 AAALFF 253 (460)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 13
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.29 E-value=2.4e-06 Score=82.92 Aligned_cols=75 Identities=20% Similarity=0.387 Sum_probs=61.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C-CcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D-SRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~-~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
++++.++|...|.|..|..+++. .++|+|+|.++++++.|+ ++. + ++++++++++.++....+ +++|.|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~----~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVR----EPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCC----SCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhcc----CCcCEE
Confidence 57889999999999999999976 689999999999999994 443 2 689999988888755432 479999
Q ss_pred EEcCCC
Q psy2380 318 LFDLGI 323 (733)
Q Consensus 318 l~DLGv 323 (733)
++|+|+
T Consensus 94 ~~~~~~ 99 (185)
T 3mti_A 94 IFNLGY 99 (185)
T ss_dssp EEEEC-
T ss_pred EEeCCC
Confidence 998865
No 14
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.07 E-value=1.6e-05 Score=81.13 Aligned_cols=84 Identities=19% Similarity=0.336 Sum_probs=66.8
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
...++..+.. +++..++|...|.|..+..+++.++|.++++++|.++++++.|+ +++ .+|++++++++.+.
T Consensus 82 ~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 82 AALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG- 157 (255)
T ss_dssp HHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-
T ss_pred HHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-
Confidence 3344555555 67889999999999999999999878999999999999999984 442 46799999988743
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
+. -.++|.|+.|.
T Consensus 158 --~~---~~~~D~v~~~~ 170 (255)
T 3mb5_A 158 --IE---EENVDHVILDL 170 (255)
T ss_dssp --CC---CCSEEEEEECS
T ss_pred --cC---CCCcCEEEECC
Confidence 22 24699999864
No 15
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.99 E-value=6.2e-05 Score=72.56 Aligned_cols=82 Identities=15% Similarity=0.179 Sum_probs=62.7
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CC-cEEEEccCccch
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DS-RFSIIHNCFTEL 302 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~-r~~~~~~~f~~~ 302 (733)
.+.+++.+.. +++..++|...|.|..+..+++. ..+++|+|.++++++.++ ++. .+ |++++++++.+.
T Consensus 41 ~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 41 TKILVENVVV---DKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHCCC---CTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred HHHHHHHccc---CCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 3445566655 67889999999999999999887 579999999999999984 442 22 599999987653
Q ss_pred HHHHHhCCCCcccEEEEcCC
Q psy2380 303 DIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~DLG 322 (733)
. . -.++|.|+.|..
T Consensus 115 ~---~---~~~~D~v~~~~~ 128 (194)
T 1dus_A 115 V---K---DRKYNKIITNPP 128 (194)
T ss_dssp C---T---TSCEEEEEECCC
T ss_pred c---c---cCCceEEEECCC
Confidence 2 1 247999998643
No 16
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.97 E-value=4.2e-05 Score=85.40 Aligned_cols=80 Identities=19% Similarity=0.186 Sum_probs=66.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|++.|.||.|..+++.+++.++|+|+|+|+++++.+ ++++ -.++.+++.+..++..... +++|.|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~----~~FD~I 179 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFS----GFFDRI 179 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHT----TCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcc----ccCCEE
Confidence 6789999999999999999999987779999999999999988 3442 2469999988877665443 379999
Q ss_pred EEcCCCCc
Q psy2380 318 LFDLGISS 325 (733)
Q Consensus 318 l~DLGvss 325 (733)
+.|--+|.
T Consensus 180 l~DaPCSg 187 (456)
T 3m4x_A 180 VVDAPCSG 187 (456)
T ss_dssp EEECCCCC
T ss_pred EECCCCCC
Confidence 99977764
No 17
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.96 E-value=5.2e-05 Score=75.72 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=63.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.+++.++|.-.|.|+++..+++.++++++++++|.++++++.|+ ++. .+++++++++..+....+...+..++|.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 45789999999999999999999866899999999999999984 442 4689999998766544443333246999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|++|.
T Consensus 137 v~~d~ 141 (223)
T 3duw_A 137 IFIDA 141 (223)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99874
No 18
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.95 E-value=8.1e-05 Score=83.82 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=66.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC---CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++..++|++.|.||-|..+++.+++.++|+|+|+++++++.+ ++++ -+++++++++..++..... .++|.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~----~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVP----EMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHST----TCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhcc----ccCCEEE
Confidence 788999999999999999999987789999999999999998 3443 2479999998888654322 3699999
Q ss_pred EcCCCCcc
Q psy2380 319 FDLGISSN 326 (733)
Q Consensus 319 ~DLGvss~ 326 (733)
.|-=+|..
T Consensus 193 ~D~PcSg~ 200 (479)
T 2frx_A 193 LDAPCSGE 200 (479)
T ss_dssp EECCCCCG
T ss_pred ECCCcCCc
Confidence 99776643
No 19
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.93 E-value=1.3e-05 Score=85.18 Aligned_cols=83 Identities=18% Similarity=0.225 Sum_probs=67.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|++.|.||.|..+++.+++.++|+|+|+|+++++.+ ++++ -++++++++++.++...... ..++|.|
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~--~~~fD~V 178 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR--YHEVHYI 178 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGG--GTTEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccc--cCCCCEE
Confidence 6789999999999999999999987789999999999999998 3443 25799999998776432111 1369999
Q ss_pred EEcCCCCcc
Q psy2380 318 LFDLGISSN 326 (733)
Q Consensus 318 l~DLGvss~ 326 (733)
|+|-.+|..
T Consensus 179 l~D~PcSg~ 187 (309)
T 2b9e_A 179 LLDPSCSGS 187 (309)
T ss_dssp EECCCCCC-
T ss_pred EEcCCcCCC
Confidence 999998875
No 20
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.89 E-value=9.3e-05 Score=82.15 Aligned_cols=86 Identities=20% Similarity=0.268 Sum_probs=69.1
Q ss_pred hhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCC
Q psy2380 234 NWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYN 310 (733)
Q Consensus 234 ~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~ 310 (733)
..+.+ +++..++|++.|.||.|..+++.. ++++|+|+|+++..++.++ ++. +-++++++.++.++...++.
T Consensus 240 ~~l~~---~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~-- 313 (429)
T 1sqg_A 240 TWLAP---QNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE-- 313 (429)
T ss_dssp HHHCC---CTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTT--
T ss_pred HHcCC---CCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhccc--
Confidence 34455 678899999999999999999987 5599999999999999983 443 33578899988887654432
Q ss_pred CCcccEEEEcCCCCcc
Q psy2380 311 IKKIDGILFDLGISSN 326 (733)
Q Consensus 311 ~~~~dgil~DLGvss~ 326 (733)
.++|.|+.|--+|..
T Consensus 314 -~~fD~Vl~D~Pcsg~ 328 (429)
T 1sqg_A 314 -QQFDRILLDAPCSAT 328 (429)
T ss_dssp -CCEEEEEEECCCCCG
T ss_pred -CCCCEEEEeCCCCcc
Confidence 469999999887765
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.82 E-value=0.00016 Score=71.13 Aligned_cols=83 Identities=11% Similarity=0.192 Sum_probs=63.6
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDII 305 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~ 305 (733)
..++..+.. +++..++|.-.|.|..+..+++.. |.++++|+|.++++++.|+ ++. -++++++++++.+..
T Consensus 30 ~~~l~~l~~---~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 103 (204)
T 3e05_A 30 AVTLSKLRL---QDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL-- 103 (204)
T ss_dssp HHHHHHTTC---CTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC--
T ss_pred HHHHHHcCC---CCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh--
Confidence 334555555 678899999999999999999884 7899999999999999984 432 268999998875431
Q ss_pred HHhCCCCcccEEEEcC
Q psy2380 306 LKKYNIKKIDGILFDL 321 (733)
Q Consensus 306 l~~~~~~~~dgil~DL 321 (733)
.. .+++|.|+.+.
T Consensus 104 -~~--~~~~D~i~~~~ 116 (204)
T 3e05_A 104 -DD--LPDPDRVFIGG 116 (204)
T ss_dssp -TT--SCCCSEEEESC
T ss_pred -hc--CCCCCEEEECC
Confidence 11 14688888663
No 22
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.81 E-value=4.6e-05 Score=85.15 Aligned_cols=82 Identities=17% Similarity=0.186 Sum_probs=65.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|++.|.||.|..+++.++..++|+|+|+++..++.++ +++ -+++++++++..++... ..-.++|.|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~fD~V 334 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI---IGEEVADKV 334 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS---SCSSCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh---hccCCCCEE
Confidence 67889999999999999999999855599999999999999883 442 24799999888775421 111469999
Q ss_pred EEcCCCCcc
Q psy2380 318 LFDLGISSN 326 (733)
Q Consensus 318 l~DLGvss~ 326 (733)
++|-=+|+.
T Consensus 335 l~D~Pcsg~ 343 (450)
T 2yxl_A 335 LLDAPCTSS 343 (450)
T ss_dssp EEECCCCCG
T ss_pred EEcCCCCCC
Confidence 999777653
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.75 E-value=0.0002 Score=68.29 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=60.7
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
...+++.+.. +++..++|.-.|.|..+..+++.. +.++++|+|.++++++.|+ ++. .+++ +++++..+
T Consensus 14 ~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-- 86 (178)
T 3hm2_A 14 RALAISALAP---KPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-- 86 (178)
T ss_dssp HHHHHHHHCC---CTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG--
T ss_pred HHHHHHHhcc---cCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh--
Confidence 3445555655 678899999999999999999886 7799999999999999984 442 3478 77766533
Q ss_pred HHHHhCCCCcccEEEE
Q psy2380 304 IILKKYNIKKIDGILF 319 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~ 319 (733)
.++... +++|.|+.
T Consensus 87 -~~~~~~-~~~D~i~~ 100 (178)
T 3hm2_A 87 -AFDDVP-DNPDVIFI 100 (178)
T ss_dssp -GGGGCC-SCCSEEEE
T ss_pred -hhhccC-CCCCEEEE
Confidence 222211 46898885
No 24
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.70 E-value=0.00035 Score=65.85 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=62.4
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHH--HH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDII--LK 307 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~--l~ 307 (733)
.++++.+.. ++++..++|...|.|+.+..+++.++++.+++|+|.++ +++ .+++++++.++.+.... +.
T Consensus 11 ~~~~~~~~~--~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~------~~~~~~~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 11 DEIQQSDKL--FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP------IVGVDFLQGDFRDELVMKALL 81 (180)
T ss_dssp HHHHHHHCC--CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC------CTTEEEEESCTTSHHHHHHHH
T ss_pred HHHHHHhCC--CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc------cCcEEEEEcccccchhhhhhh
Confidence 455555542 15678999999999999999999987778999999998 432 15789999888876421 11
Q ss_pred h-CCCCcccEEEEcCCCC
Q psy2380 308 K-YNIKKIDGILFDLGIS 324 (733)
Q Consensus 308 ~-~~~~~~dgil~DLGvs 324 (733)
+ ..-.++|.|+.|.-++
T Consensus 82 ~~~~~~~~D~i~~~~~~~ 99 (180)
T 1ej0_A 82 ERVGDSKVQVVMSDMAPN 99 (180)
T ss_dssp HHHTTCCEEEEEECCCCC
T ss_pred ccCCCCceeEEEECCCcc
Confidence 1 2224799999876543
No 25
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.68 E-value=0.00019 Score=74.46 Aligned_cols=84 Identities=21% Similarity=0.354 Sum_probs=66.2
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
...++..+.. .++..++|.-.|.|..+..+++.++|.++++++|.++++++.|+ ++. .++++++++++.+.
T Consensus 101 ~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 101 SSFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG- 176 (277)
T ss_dssp HHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-
T ss_pred HHHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-
Confidence 3445555555 67889999999999999999999778899999999999999984 442 25899999987664
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
+.. .++|.|++|.
T Consensus 177 --~~~---~~~D~V~~~~ 189 (277)
T 1o54_A 177 --FDE---KDVDALFLDV 189 (277)
T ss_dssp --CSC---CSEEEEEECC
T ss_pred --ccC---CccCEEEECC
Confidence 221 4699999853
No 26
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.66 E-value=0.00017 Score=72.41 Aligned_cols=83 Identities=14% Similarity=0.278 Sum_probs=64.5
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILK 307 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~ 307 (733)
+.+++.+.. ..++..++|.-.|.|..+..+++.. |+.+++|+|.++++++.|+ ++. ..+++++++++.++..
T Consensus 33 ~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~--- 106 (234)
T 3dtn_A 33 GVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDF--- 106 (234)
T ss_dssp HHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCC---
T ss_pred HHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCC---
Confidence 344444442 1567899999999999999999997 7789999999999999994 554 3489999999877532
Q ss_pred hCCCCcccEEEEcC
Q psy2380 308 KYNIKKIDGILFDL 321 (733)
Q Consensus 308 ~~~~~~~dgil~DL 321 (733)
. +++|.|+...
T Consensus 107 --~-~~fD~v~~~~ 117 (234)
T 3dtn_A 107 --E-EKYDMVVSAL 117 (234)
T ss_dssp --C-SCEEEEEEES
T ss_pred --C-CCceEEEEeC
Confidence 1 4789998763
No 27
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.64 E-value=0.00018 Score=72.35 Aligned_cols=78 Identities=13% Similarity=0.230 Sum_probs=61.8
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.++..++|...|.|..+..+++.+ |+++|+++|.++++++.|+ ++. .+++++++++..+....+.. -+++|.
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~--~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL--YPLFDV 129 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT--SCCEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc--CCCccE
Confidence 567899999999999999999987 5789999999999999984 442 35899999988774332210 146999
Q ss_pred EEEcCC
Q psy2380 317 ILFDLG 322 (733)
Q Consensus 317 il~DLG 322 (733)
|+.|.+
T Consensus 130 I~~~~~ 135 (233)
T 2gpy_A 130 LFIDAA 135 (233)
T ss_dssp EEEEGG
T ss_pred EEECCC
Confidence 998654
No 28
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.55 E-value=0.00052 Score=65.85 Aligned_cols=80 Identities=21% Similarity=0.309 Sum_probs=60.3
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
..+++.+.. .++..++|...|.|..+..+++.. .+++|+|.++++++.++ ++. .+++.++++++.+
T Consensus 23 ~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--- 93 (192)
T 1l3i_A 23 CLIMCLAEP---GKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE--- 93 (192)
T ss_dssp HHHHHHHCC---CTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH---
T ss_pred HHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH---
Confidence 334444554 678899999999999999999874 79999999999999984 442 2689998886544
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
.++.. +++|.|+.+
T Consensus 94 ~~~~~--~~~D~v~~~ 107 (192)
T 1l3i_A 94 ALCKI--PDIDIAVVG 107 (192)
T ss_dssp HHTTS--CCEEEEEES
T ss_pred hcccC--CCCCEEEEC
Confidence 33332 368988875
No 29
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.53 E-value=0.00032 Score=75.54 Aligned_cols=84 Identities=18% Similarity=0.172 Sum_probs=65.6
Q ss_pred HHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C-CcEEEEccCccchHHHHH
Q psy2380 232 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D-SRFSIIHNCFTELDIILK 307 (733)
Q Consensus 232 vl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~-~r~~~~~~~f~~~~~~l~ 307 (733)
++..... +++..++|..+|.|..+..+++..+++.+++|+|+|+++++.|+ +++ + ++++++++++.++...
T Consensus 195 l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~-- 269 (354)
T 3tma_A 195 LLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF-- 269 (354)
T ss_dssp HHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT--
T ss_pred HHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc--
Confidence 3444444 67889999999999999999998757789999999999999994 543 1 3799999998886422
Q ss_pred hCCCCcccEEEEcCCC
Q psy2380 308 KYNIKKIDGILFDLGI 323 (733)
Q Consensus 308 ~~~~~~~dgil~DLGv 323 (733)
.+.+|.|+.|.=|
T Consensus 270 ---~~~~D~Ii~npPy 282 (354)
T 3tma_A 270 ---FPEVDRILANPPH 282 (354)
T ss_dssp ---CCCCSEEEECCCS
T ss_pred ---cCCCCEEEECCCC
Confidence 1347999988655
No 30
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.52 E-value=0.00035 Score=72.43 Aligned_cols=82 Identities=17% Similarity=0.258 Sum_probs=61.3
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
..+++.+.. +++..++|.-.|.|+.+..+++.+.+.++++|+|.++++++.|+ ++. .++++++++++.+.
T Consensus 100 ~~~~~~~~~---~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-- 174 (275)
T 1yb2_A 100 SYIIMRCGL---RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-- 174 (275)
T ss_dssp ------CCC---CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--
T ss_pred HHHHHHcCC---CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc--
Confidence 344555555 67889999999999999999998767899999999999999984 442 25799999887651
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
+. -+++|.|+.|
T Consensus 175 -~~---~~~fD~Vi~~ 186 (275)
T 1yb2_A 175 -IS---DQMYDAVIAD 186 (275)
T ss_dssp -CC---SCCEEEEEEC
T ss_pred -Cc---CCCccEEEEc
Confidence 11 1469999974
No 31
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.50 E-value=0.00039 Score=69.53 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=59.5
Q ss_pred cCCCEEEEEccC-CChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFG-QGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G-~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
++++.++|...| .|..+..+++.. .++++|+|+|+++++.|+ ++. +.++++++++...+.... -+++|.|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~~fD~I 127 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV----EGTFDVI 127 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC----CSCEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc----cCceeEE
Confidence 468899999999 999999999886 689999999999999994 443 337899998865433221 1579999
Q ss_pred EEcCCC
Q psy2380 318 LFDLGI 323 (733)
Q Consensus 318 l~DLGv 323 (733)
+.|.-+
T Consensus 128 ~~npp~ 133 (230)
T 3evz_A 128 FSAPPY 133 (230)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 988444
No 32
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.49 E-value=0.0012 Score=64.68 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=57.2
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHH-----
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI----- 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~----- 304 (733)
.|+.+.+.. ++++..++|...|.|+-|..++++ .++|+|+|.++.+ . .++++++++++.+...
T Consensus 14 ~ei~~~~~~--~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----~--~~~v~~~~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 14 EFLLDRYRV--VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----E--IAGVRFIRCDIFKETIFDDID 81 (191)
T ss_dssp HHHHHHHCC--SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----C--CTTCEEEECCTTSSSHHHHHH
T ss_pred HHHHHHcCC--CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----c--CCCeEEEEccccCHHHHHHHH
Confidence 455555542 257889999999999999999887 6899999999742 1 2578999999876431
Q ss_pred -HHHhCCCCcccEEEEcC
Q psy2380 305 -ILKKYNIKKIDGILFDL 321 (733)
Q Consensus 305 -~l~~~~~~~~dgil~DL 321 (733)
.+.+.+.+++|.|+.|.
T Consensus 82 ~~~~~~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDA 99 (191)
T ss_dssp HHHHHHTCSSEEEEEECC
T ss_pred HHhhcccCCcceEEecCC
Confidence 22211123799999864
No 33
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.48 E-value=0.00019 Score=74.83 Aligned_cols=72 Identities=24% Similarity=0.218 Sum_probs=58.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
++++.++|+..|.|+.|..+++.. .. +|+|+|.++++++.|+ +.. ++++++++++..++.. -.++|.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~------~~~fD~ 195 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------ENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC------CSCEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc------cCCccE
Confidence 468899999999999999999884 43 8999999999999984 432 4579999998877543 247999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|++|.
T Consensus 196 Vi~~~ 200 (278)
T 2frn_A 196 ILMGY 200 (278)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98863
No 34
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.46 E-value=0.00042 Score=68.04 Aligned_cols=84 Identities=11% Similarity=0.099 Sum_probs=61.4
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDI 304 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~ 304 (733)
.+.+++.+......+++.++|...|.|..+..+++.. |+++++|+|.++++++.++ +.. -++++++++++.+..
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 128 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP- 128 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-
Confidence 3445555443000137899999999999999999986 6789999999999999984 332 235999999887653
Q ss_pred HHHhCCCCcccEEEE
Q psy2380 305 ILKKYNIKKIDGILF 319 (733)
Q Consensus 305 ~l~~~~~~~~dgil~ 319 (733)
. .+++|.|+.
T Consensus 129 --~---~~~~D~i~~ 138 (207)
T 1jsx_A 129 --S---EPPFDGVIS 138 (207)
T ss_dssp --C---CSCEEEEEC
T ss_pred --c---cCCcCEEEE
Confidence 1 146888876
No 35
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.46 E-value=0.00051 Score=69.95 Aligned_cols=44 Identities=18% Similarity=0.043 Sum_probs=38.2
Q ss_pred cCCCEEEEEccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHhc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLGN 285 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a~ 285 (733)
.++..++|...|.|..+..+++.+ .+..+|+|+|+|+++++.|+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~ 94 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAA 94 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHH
Confidence 456799999999999999999872 25679999999999999984
No 36
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.46 E-value=0.00057 Score=67.07 Aligned_cols=71 Identities=14% Similarity=0.045 Sum_probs=55.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|.-.|.|..+..+.+. +..+++|+|.++++++.|+ ++. .++++++++++.+.. -+++|.|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-------DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-------CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-------CCCceEE
Confidence 46789999999999999997753 5579999999999999984 442 123899998876531 1479999
Q ss_pred EEcC
Q psy2380 318 LFDL 321 (733)
Q Consensus 318 l~DL 321 (733)
+.+.
T Consensus 130 ~~~~ 133 (205)
T 3grz_A 130 VANI 133 (205)
T ss_dssp EEES
T ss_pred EECC
Confidence 9874
No 37
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.43 E-value=0.00021 Score=71.32 Aligned_cols=92 Identities=16% Similarity=0.072 Sum_probs=67.2
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--------CCcEEEEc
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--------DSRFSIIH 296 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--------~~r~~~~~ 296 (733)
|.+...+++.+.. .++++..++|...|.|+.+..+++..+++++|+|+|.++++++.++ ++. .+++++++
T Consensus 61 p~~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 139 (226)
T 1i1n_A 61 PHMHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV 139 (226)
T ss_dssp HHHHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE
T ss_pred HHHHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEE
Confidence 4444455555541 0167889999999999999999998877789999999999999984 432 24799988
Q ss_pred cCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 297 NCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 297 ~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
.+..+.. .. -.++|.|+.|..+
T Consensus 140 ~d~~~~~---~~--~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 140 GDGRMGY---AE--EAPYDAIHVGAAA 161 (226)
T ss_dssp SCGGGCC---GG--GCCEEEEEECSBB
T ss_pred CCcccCc---cc--CCCcCEEEECCch
Confidence 8765421 11 1368999877654
No 38
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.32 E-value=0.00026 Score=73.15 Aligned_cols=79 Identities=18% Similarity=0.103 Sum_probs=60.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCH-------HHHHHhc-ccC----CCcEEEEccCccchHHHHHhC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDT-------ESVSLGN-KIT----DSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~-------~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~ 309 (733)
.++..++|+|.|.|..|..+++. .++|+|+|+++ ++++.|+ +.+ .+|+++++++..++...+...
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 45779999999999999999875 46899999999 9999984 432 367999999987754333320
Q ss_pred CCCcccEEEEcCCCC
Q psy2380 310 NIKKIDGILFDLGIS 324 (733)
Q Consensus 310 ~~~~~dgil~DLGvs 324 (733)
+ .++|.|++|-.+.
T Consensus 159 ~-~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 159 Q-GKPDIVYLDPMYP 172 (258)
T ss_dssp H-CCCSEEEECCCC-
T ss_pred C-CCccEEEECCCCC
Confidence 0 2699999987663
No 39
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.28 E-value=0.0014 Score=64.73 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=62.9
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHh
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKK 308 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~ 308 (733)
.++++.+.. ++++.++|.-.|.|..+..++++ +.+++|+|.++++++.++ ++. ++++++++++.++..
T Consensus 35 ~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~---- 103 (220)
T 3hnr_A 35 EDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEV---- 103 (220)
T ss_dssp HHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCC----
T ss_pred HHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCC----
Confidence 456666666 67889999999999999999986 569999999999999995 443 688999998887532
Q ss_pred CCCCcccEEEEc
Q psy2380 309 YNIKKIDGILFD 320 (733)
Q Consensus 309 ~~~~~~dgil~D 320 (733)
. +++|.|+..
T Consensus 104 -~-~~fD~v~~~ 113 (220)
T 3hnr_A 104 -P-TSIDTIVST 113 (220)
T ss_dssp -C-SCCSEEEEE
T ss_pred -C-CCeEEEEEC
Confidence 1 478988875
No 40
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.27 E-value=0.00061 Score=70.75 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=65.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|+..|.||.|..+++.++..++|+|+|+++++++.++ +++ -+++++++++..++...+... -.++|.|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~-~~~fD~V 160 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKN-EIFFDKI 160 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHT-TCCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhc-cccCCEE
Confidence 67889999999999999999998755599999999999999883 442 247999999887765443211 1479999
Q ss_pred EEcCCCCcc
Q psy2380 318 LFDLGISSN 326 (733)
Q Consensus 318 l~DLGvss~ 326 (733)
+.|-=+|..
T Consensus 161 l~d~Pcs~~ 169 (274)
T 3ajd_A 161 LLDAPCSGN 169 (274)
T ss_dssp EEEECCC--
T ss_pred EEcCCCCCC
Confidence 999766553
No 41
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.26 E-value=0.00068 Score=71.99 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=65.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|...|.|+.|..+++.+++.++|+|+|+++++++.++ +++ -+++++++++..++.. . -+++|.|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~----~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-L----NVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-G----CCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-c----cccCCEE
Confidence 67889999999999999999999877799999999999999984 443 2479999999887654 1 1469999
Q ss_pred EEcCCCCcc
Q psy2380 318 LFDLGISSN 326 (733)
Q Consensus 318 l~DLGvss~ 326 (733)
+.|--+|+.
T Consensus 192 l~d~Pcsg~ 200 (315)
T 1ixk_A 192 LLDAPCTGS 200 (315)
T ss_dssp EEECCTTST
T ss_pred EEeCCCCCc
Confidence 999766543
No 42
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.24 E-value=0.0042 Score=60.40 Aligned_cols=54 Identities=26% Similarity=0.268 Sum_probs=43.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhcccCCCcEEEEccCccch
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL 302 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~-~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~ 302 (733)
+++..++|...|.|+.|..++++.++ +++|+|+|.++.+ . .++++++++++.+.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----~--~~~v~~~~~d~~~~ 75 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----P--IPNVYFIQGEIGKD 75 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----C--CTTCEEEECCTTTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----C--CCCceEEEccccch
Confidence 56789999999999999999999853 7999999999832 1 24678888777654
No 43
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.17 E-value=0.00097 Score=67.77 Aligned_cols=78 Identities=10% Similarity=0.113 Sum_probs=63.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+||..++|.-.|.|..+..+.+..+|+|+|||+|.++++++.++ +.+ ..++..+...-.+...+- ...+++|.|+.
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~--~~~~~vDvVf~ 153 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYR--HLVEGVDGLYA 153 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGT--TTCCCEEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccc--cccceEEEEEE
Confidence 89999999999999999999999999999999999999999884 333 357888888776655432 22357998887
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
|+
T Consensus 154 d~ 155 (233)
T 4df3_A 154 DV 155 (233)
T ss_dssp CC
T ss_pred ec
Confidence 65
No 44
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.15 E-value=0.00056 Score=68.28 Aligned_cols=80 Identities=15% Similarity=0.308 Sum_probs=62.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHH-hCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILK-KYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~-~~~~~~~d 315 (733)
.++..++|.-.|.|..|..+++.++++++|+++|.++++++.|+ +++ .+|+++++++..+....+. +.+.+++|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 45679999999999999999998877899999999999999984 442 4689999998755322221 11225799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|++|.
T Consensus 137 ~V~~d~ 142 (221)
T 3u81_A 137 MVFLDH 142 (221)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999884
No 45
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.15 E-value=0.00088 Score=71.49 Aligned_cols=90 Identities=19% Similarity=0.314 Sum_probs=67.8
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--------------CC
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--------------DS 290 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--------------~~ 290 (733)
|.....++..+.. .++..++|.-.|.|..+..+++..+++++|+|+|.++++++.|+ ++. .+
T Consensus 91 ~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 91 PKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp HHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCC
Confidence 4445556666665 77889999999999999999998878899999999999999984 332 25
Q ss_pred cEEEEccCccchHHHHHhCCCCcccEEEEcC
Q psy2380 291 RFSIIHNCFTELDIILKKYNIKKIDGILFDL 321 (733)
Q Consensus 291 r~~~~~~~f~~~~~~l~~~~~~~~dgil~DL 321 (733)
++++++++..+...-++. .++|.|++|.
T Consensus 168 ~v~~~~~d~~~~~~~~~~---~~fD~V~~~~ 195 (336)
T 2b25_A 168 NVDFIHKDISGATEDIKS---LTFDAVALDM 195 (336)
T ss_dssp CEEEEESCTTCCC----------EEEEEECS
T ss_pred ceEEEECChHHcccccCC---CCeeEEEECC
Confidence 899999988775322222 3699999864
No 46
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.14 E-value=0.001 Score=66.24 Aligned_cols=81 Identities=20% Similarity=0.088 Sum_probs=62.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhC-CCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKY-NIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~-~~~~~d 315 (733)
.++..++|...|.|..|..+++.++++++|+++|.++++++.|+ +++ .+++++++++..+....+... ...++|
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 45679999999999999999999866899999999999999984 442 467999998875543333221 114799
Q ss_pred EEEEcCC
Q psy2380 316 GILFDLG 322 (733)
Q Consensus 316 gil~DLG 322 (733)
.|++|..
T Consensus 143 ~v~~~~~ 149 (225)
T 3tr6_A 143 LIYIDAD 149 (225)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9997764
No 47
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.14 E-value=0.00021 Score=73.81 Aligned_cols=87 Identities=15% Similarity=0.184 Sum_probs=63.1
Q ss_pred HHHHHhhhhcccccCC--CEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHH-------HHHhc-ccC--C---CcEE
Q psy2380 229 LNEAINWLNIENERIN--GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTES-------VSLGN-KIT--D---SRFS 293 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~--~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a-------~~~a~-~l~--~---~r~~ 293 (733)
-+.+.+.+.. +++ ..++|+|.|.|.+|..+++. +++|+++|+++.+ ++.++ +.. + +|++
T Consensus 75 ~e~l~~al~l---~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~ 148 (258)
T 2oyr_A 75 GEAVAKAVGI---KGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQ 148 (258)
T ss_dssp GSHHHHHTTC---BTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEE
T ss_pred HHHHHHHhcc---cCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEE
Confidence 3455566654 556 79999999999999999987 4579999999964 55542 221 2 5799
Q ss_pred EEccCccchHHHHHhCCCCcccEEEEcCCCCc
Q psy2380 294 IIHNCFTELDIILKKYNIKKIDGILFDLGISS 325 (733)
Q Consensus 294 ~~~~~f~~~~~~l~~~~~~~~dgil~DLGvss 325 (733)
+++++..++ ++... +++|.|++|-++..
T Consensus 149 ~~~~D~~~~---L~~~~-~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 149 LIHASSLTA---LTDIT-PRPQVVYLDPMFPH 176 (258)
T ss_dssp EEESCHHHH---STTCS-SCCSEEEECCCCCC
T ss_pred EEECCHHHH---HHhCc-ccCCEEEEcCCCCC
Confidence 999987653 33322 36999999998843
No 48
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.08 E-value=0.0013 Score=65.59 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=61.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++..++|...|.|..+..+++++++.++|+|+|.++++++.++ +.+ .++++++++++.+...+.. .. +++|.|+.
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~-~~~D~v~~ 149 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRA-LV-PKVDVIFE 149 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTT-TC-CCEEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhc-cc-CCceEEEE
Confidence 67889999999999999999999877899999999998887763 332 2689999998877532211 11 36999997
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
|.
T Consensus 150 ~~ 151 (227)
T 1g8a_A 150 DV 151 (227)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 49
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.07 E-value=0.0012 Score=66.50 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=61.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH-HHHhCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI-ILKKYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~-~l~~~~~~~~d 315 (733)
.+++.++|...|.|..+..+++.. ++++|+++|.++++++.|+ +++ .+++++++++..+... .++ +++|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~----~~fD 144 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVND----KVYD 144 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTT----SCEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhcc----CCcc
Confidence 457899999999999999999854 6899999999999999994 442 3589999999876532 222 4799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|++|.
T Consensus 145 ~V~~~~ 150 (232)
T 3ntv_A 145 MIFIDA 150 (232)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 999884
No 50
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.04 E-value=0.0023 Score=64.92 Aligned_cols=86 Identities=16% Similarity=0.260 Sum_probs=67.4
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccch
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTEL 302 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~ 302 (733)
....+++.+.. +++..++|...|.|..+..+++.++|.++++++|.++++++.|+ +++ .+++++++.++.+.
T Consensus 84 ~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 84 DASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp HHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred HHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 33455666655 67889999999999999999999878899999999999999984 432 26899999887664
Q ss_pred HHHHHhCCCCcccEEEEcC
Q psy2380 303 DIILKKYNIKKIDGILFDL 321 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~DL 321 (733)
. +. -.++|.|+.|.
T Consensus 161 ~--~~---~~~~D~v~~~~ 174 (258)
T 2pwy_A 161 E--LE---EAAYDGVALDL 174 (258)
T ss_dssp C--CC---TTCEEEEEEES
T ss_pred C--CC---CCCcCEEEECC
Confidence 1 11 14699999864
No 51
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.03 E-value=0.00092 Score=74.74 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=65.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
+++..++|++.|.||-|..+++.+++.++|+|+|+|+++++.+ ++++ +-.+.+++++..++..... .++|.|+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~----~~FD~Il 175 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFG----TYFHRVL 175 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHC----SCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhcc----ccCCEEE
Confidence 6789999999999999999999987779999999999999998 3443 2128888888777654432 4799999
Q ss_pred EcCCCCc
Q psy2380 319 FDLGISS 325 (733)
Q Consensus 319 ~DLGvss 325 (733)
+|-=+|+
T Consensus 176 ~D~PcSg 182 (464)
T 3m6w_A 176 LDAPCSG 182 (464)
T ss_dssp EECCCCC
T ss_pred ECCCcCC
Confidence 9987764
No 52
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.01 E-value=0.0024 Score=66.03 Aligned_cols=81 Identities=16% Similarity=0.110 Sum_probs=63.3
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDII 305 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~ 305 (733)
..++++.+.. .+++.++|.-.|.|..+..+++. +.+|+|+|.++++++.++ ++. +.++++++++..++..
T Consensus 109 ~~~~~~~~~~---~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~- 181 (286)
T 3m70_A 109 HGDVVDAAKI---ISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI- 181 (286)
T ss_dssp CHHHHHHHHH---SCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-
T ss_pred HHHHHHHhhc---cCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-
Confidence 3455666655 56789999999999999999987 459999999999999984 443 3389999988876532
Q ss_pred HHhCCCCcccEEEEcC
Q psy2380 306 LKKYNIKKIDGILFDL 321 (733)
Q Consensus 306 l~~~~~~~~dgil~DL 321 (733)
-+++|.|+.+.
T Consensus 182 -----~~~fD~i~~~~ 192 (286)
T 3m70_A 182 -----QENYDFIVSTV 192 (286)
T ss_dssp -----CSCEEEEEECS
T ss_pred -----cCCccEEEEcc
Confidence 24799998865
No 53
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.99 E-value=0.0021 Score=62.17 Aligned_cols=79 Identities=18% Similarity=0.121 Sum_probs=59.8
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDII 305 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~ 305 (733)
.++++.+.. .+++.++|.-.|.|..+..+++. +.+++|+|.++++++.++ +.. -+++++++.++.++..
T Consensus 22 ~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~- 94 (199)
T 2xvm_A 22 SEVLEAVKV---VKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF- 94 (199)
T ss_dssp HHHHHHTTT---SCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-
T ss_pred HHHHHHhhc---cCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-
Confidence 345555554 56789999999999999999886 469999999999999984 432 2368999888776531
Q ss_pred HHhCCCCcccEEEEc
Q psy2380 306 LKKYNIKKIDGILFD 320 (733)
Q Consensus 306 l~~~~~~~~dgil~D 320 (733)
-+++|.|+..
T Consensus 95 -----~~~~D~v~~~ 104 (199)
T 2xvm_A 95 -----DRQYDFILST 104 (199)
T ss_dssp -----CCCEEEEEEE
T ss_pred -----CCCceEEEEc
Confidence 2468888754
No 54
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.96 E-value=0.0023 Score=68.51 Aligned_cols=76 Identities=17% Similarity=0.224 Sum_probs=57.2
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCC----cEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKK----GRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~----~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
+++..++|.++|.|+-+..+++.+... .+++|+|+|+++++.|+ ++. +.++.+++++.-+. ....++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~------~~~~~f 202 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN------LLVDPV 202 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC------CCCCCE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc------cccCCc
Confidence 456799999999999999999987433 89999999999999994 442 33678888775431 112468
Q ss_pred cEEEEcCCC
Q psy2380 315 DGILFDLGI 323 (733)
Q Consensus 315 dgil~DLGv 323 (733)
|.|+.|.=+
T Consensus 203 D~Ii~NPPf 211 (344)
T 2f8l_A 203 DVVISDLPV 211 (344)
T ss_dssp EEEEEECCC
T ss_pred cEEEECCCC
Confidence 888887543
No 55
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.96 E-value=0.0041 Score=67.50 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=56.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C-CcEEEEccCccc-hHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D-SRFSIIHNCFTE-LDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~-~r~~~~~~~f~~-~~~~l~~~~~~~~dgi 317 (733)
++..++|.- |.|..+.++++. +++++++|+|+|+++++.|+ +++ + +|+++++++..+ +.... -+++|.|
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~----~~~fD~V 245 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYA----LHKFDTF 245 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTT----SSCBSEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhc----cCCccEE
Confidence 567999999 999999998776 46789999999999999984 442 1 389999998876 42211 1368999
Q ss_pred EEcC
Q psy2380 318 LFDL 321 (733)
Q Consensus 318 l~DL 321 (733)
+.|.
T Consensus 246 i~~~ 249 (373)
T 2qm3_A 246 ITDP 249 (373)
T ss_dssp EECC
T ss_pred EECC
Confidence 9874
No 56
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.96 E-value=0.0016 Score=65.50 Aligned_cols=77 Identities=16% Similarity=0.112 Sum_probs=61.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----C-CcEEEEccCccchHHHHHhCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----D-SRFSIIHNCFTELDIILKKYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~-~r~~~~~~~f~~~~~~l~~~~~~~~d 315 (733)
+++..++|.-.|.|.-|..+++.++++++|+++|.|+++++.|+ +++ . +|+++++++..+. ++...-+++|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~---l~~~~~~~fD 131 (221)
T 3dr5_A 55 NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV---MSRLANDSYQ 131 (221)
T ss_dssp TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---GGGSCTTCEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH---HHHhcCCCcC
Confidence 34458999999999999999999878999999999999999984 442 3 6899999876553 3333225799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|+.|-
T Consensus 132 ~V~~d~ 137 (221)
T 3dr5_A 132 LVFGQV 137 (221)
T ss_dssp EEEECC
T ss_pred eEEEcC
Confidence 999874
No 57
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.96 E-value=0.0024 Score=64.63 Aligned_cols=78 Identities=18% Similarity=0.050 Sum_probs=61.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCC--CCccc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYN--IKKID 315 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~--~~~~d 315 (733)
+++.++|.-.|.|+.+..+++.++++++++++|+|++.++.|+ +++ .+|+++++++..+....+...+ .+++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 4579999999999999999999877899999999999999984 442 3589999988765433333222 25799
Q ss_pred EEEEc
Q psy2380 316 GILFD 320 (733)
Q Consensus 316 gil~D 320 (733)
.|+.|
T Consensus 150 ~I~~d 154 (237)
T 3c3y_A 150 FGFVD 154 (237)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 58
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.92 E-value=0.00063 Score=69.36 Aligned_cols=79 Identities=11% Similarity=0.029 Sum_probs=62.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHH-HhCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIIL-KKYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l-~~~~~~~~d 315 (733)
.++..++|...|.|..|..+++.++++++|+++|.++++++.|+ +++ .+|+++++++..+....+ ++..-+++|
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 34679999999999999999999877899999999999998884 442 468999999876643333 211124799
Q ss_pred EEEEc
Q psy2380 316 GILFD 320 (733)
Q Consensus 316 gil~D 320 (733)
.|++|
T Consensus 139 ~V~~d 143 (242)
T 3r3h_A 139 FIFID 143 (242)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99987
No 59
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.92 E-value=0.018 Score=55.52 Aligned_cols=73 Identities=16% Similarity=0.117 Sum_probs=53.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCC--------cEEEEEeCCHHHHHHhcccCCCcEEEE-ccCccchHHH---HHhC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKK--------GRLIAIDKDTESVSLGNKITDSRFSII-HNCFTELDII---LKKY 309 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~--------~~l~~~D~D~~a~~~a~~l~~~r~~~~-~~~f~~~~~~---l~~~ 309 (733)
+++..++|.-.|.|+.+..+++..++. ++|+|+|.++.+ . .++++++ ++++.+.... .+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~--~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----P--LEGATFLCPADVTDPRTSQRILEVL 93 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----C--CTTCEEECSCCTTSHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----c--CCCCeEEEeccCCCHHHHHHHHHhc
Confidence 568899999999999999999997543 899999999842 1 2467888 8887765321 1122
Q ss_pred CCCcccEEEEcC
Q psy2380 310 NIKKIDGILFDL 321 (733)
Q Consensus 310 ~~~~~dgil~DL 321 (733)
+-.++|.|+.|.
T Consensus 94 ~~~~fD~V~~~~ 105 (196)
T 2nyu_A 94 PGRRADVILSDM 105 (196)
T ss_dssp GGGCEEEEEECC
T ss_pred CCCCCcEEEeCC
Confidence 223689999863
No 60
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.91 E-value=0.0032 Score=64.87 Aligned_cols=88 Identities=11% Similarity=0.235 Sum_probs=69.0
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC------CCcEEEEccC
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT------DSRFSIIHNC 298 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~------~~r~~~~~~~ 298 (733)
|.....++..+.. +++..++|.-.|.|..+..+++.+++.++++++|.++++++.|+ ++. .+++++++++
T Consensus 85 ~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 85 PKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred HHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 4445556666665 77889999999999999999998878899999999999999984 432 3589999998
Q ss_pred ccchHHHHHhCCCCcccEEEEcC
Q psy2380 299 FTELDIILKKYNIKKIDGILFDL 321 (733)
Q Consensus 299 f~~~~~~l~~~~~~~~dgil~DL 321 (733)
+.+.. ..-.++|.|+.|+
T Consensus 162 ~~~~~-----~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 162 LADSE-----LPDGSVDRAVLDM 179 (280)
T ss_dssp GGGCC-----CCTTCEEEEEEES
T ss_pred hHhcC-----CCCCceeEEEECC
Confidence 87642 1124699999864
No 61
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.90 E-value=0.0019 Score=65.37 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=63.6
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhC
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
.++++.+.. .++..++|.-.|.|..+..+++.. |.++++|+|.++++++.+++. .++++++++++.++. .
T Consensus 23 ~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~d~~~~~---~-- 92 (259)
T 2p35_A 23 RDLLAQVPL---ERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-LPNTNFGKADLATWK---P-- 92 (259)
T ss_dssp HHHHTTCCC---SCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-STTSEEEECCTTTCC---C--
T ss_pred HHHHHhcCC---CCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-CCCcEEEECChhhcC---c--
Confidence 355555555 677899999999999999999997 678999999999999998532 357888888887754 1
Q ss_pred CCCcccEEEEcC
Q psy2380 310 NIKKIDGILFDL 321 (733)
Q Consensus 310 ~~~~~dgil~DL 321 (733)
-.++|.|+...
T Consensus 93 -~~~fD~v~~~~ 103 (259)
T 2p35_A 93 -AQKADLLYANA 103 (259)
T ss_dssp -SSCEEEEEEES
T ss_pred -cCCcCEEEEeC
Confidence 14689888753
No 62
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.88 E-value=0.0026 Score=60.86 Aligned_cols=87 Identities=17% Similarity=0.197 Sum_probs=63.4
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
+.+++.+.. ..++..++|...|.|+.+..+++. +..+|+|+|.|+++++.|+ ++. .++++++++++.+...
T Consensus 33 ~~~~~~l~~--~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 33 ESIFNMIGP--YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp HHHHHHHCS--CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHh--hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 334444432 136789999999999999998874 4579999999999999984 442 3589999998877543
Q ss_pred HHHhCCCCcccEEEEcC
Q psy2380 305 ILKKYNIKKIDGILFDL 321 (733)
Q Consensus 305 ~l~~~~~~~~dgil~DL 321 (733)
.+... -+++|.|+.|.
T Consensus 109 ~~~~~-~~~fD~i~~~~ 124 (187)
T 2fhp_A 109 QFYEE-KLQFDLVLLDP 124 (187)
T ss_dssp HHHHT-TCCEEEEEECC
T ss_pred HHHhc-CCCCCEEEECC
Confidence 33211 14799999873
No 63
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.88 E-value=0.0015 Score=66.03 Aligned_cols=75 Identities=12% Similarity=0.003 Sum_probs=56.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
++++.++|.-.|.|..+..++... ++++|+|+|.++++++.|+ +.. -+++++++++..++... ... -+++|.|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~-~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-KDV-RESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-TTT-TTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-ccc-cCCccEE
Confidence 357899999999999999998764 7789999999999999984 332 24699999987654210 000 1479999
Q ss_pred EE
Q psy2380 318 LF 319 (733)
Q Consensus 318 l~ 319 (733)
+.
T Consensus 146 ~~ 147 (240)
T 1xdz_A 146 TA 147 (240)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 64
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.85 E-value=0.012 Score=64.37 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=52.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
+++..++|+..|.|+-|..+++. +++|+|+|.++++++.|+ +++ ++++ . ..+..++++... +.+|.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~~~--~---~~D~~~~l~~~~-~~fD~ 283 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRVDI--R---HGEALPTLRGLE-GPFHH 283 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCCEE--E---ESCHHHHHHTCC-CCEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCCcE--E---EccHHHHHHHhc-CCCCE
Confidence 45889999999999999999985 345999999999999984 442 2333 3 334455565442 24999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|++|-
T Consensus 284 Ii~dp 288 (393)
T 4dmg_A 284 VLLDP 288 (393)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99874
No 65
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.85 E-value=0.0032 Score=63.53 Aligned_cols=80 Identities=15% Similarity=0.100 Sum_probs=60.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhC-------
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKY------- 309 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~------- 309 (733)
.++..++|...|.|..+..+++.+++.++|+++|.|+++++.|+ ++. .+++++++++..+....+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 45789999999999999999999866899999999999999984 442 357999998876532222110
Q ss_pred ---CC--CcccEEEEcC
Q psy2380 310 ---NI--KKIDGILFDL 321 (733)
Q Consensus 310 ---~~--~~~dgil~DL 321 (733)
.- +++|.|+.|.
T Consensus 139 ~~f~~~~~~fD~I~~~~ 155 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDA 155 (239)
T ss_dssp TTTCCSTTCEEEEEECS
T ss_pred ccccCCCCCcCEEEEeC
Confidence 00 4699999873
No 66
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.84 E-value=0.0021 Score=65.55 Aligned_cols=77 Identities=14% Similarity=0.205 Sum_probs=62.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCC-CCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYN-IKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~-~~~~d 315 (733)
.++..++|...|.|+.+..+++.++++++|+|+|+++++++.|+ ++. .+|+++++++..+ .+.... ..++|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ---SLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH---HHHTCCSCCCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH---HHHhcCCCCCeE
Confidence 45789999999999999999999866899999999999999984 442 4689999987655 344332 24799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|++|.
T Consensus 139 ~V~~d~ 144 (248)
T 3tfw_A 139 LIFIDA 144 (248)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999874
No 67
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.83 E-value=0.0018 Score=65.85 Aligned_cols=80 Identities=13% Similarity=-0.016 Sum_probs=60.1
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccc-hHHHHHhCCCCcccE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTE-LDIILKKYNIKKIDG 316 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~-~~~~l~~~~~~~~dg 316 (733)
++..++|.-.|.|+.+..++++. ++++++|+|.++++++.|+ ++. .+|+++++++..+ +.+.++..+-.++|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 56799999999999999999886 5689999999999999984 442 4579999988665 222222111136899
Q ss_pred EEEcCCC
Q psy2380 317 ILFDLGI 323 (733)
Q Consensus 317 il~DLGv 323 (733)
|+.|.=+
T Consensus 144 i~~npp~ 150 (254)
T 2h00_A 144 CMCNPPF 150 (254)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9887543
No 68
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.83 E-value=0.0025 Score=63.39 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=60.7
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++..++|.-+|.|.++..+++.. |+.+++|+|+++++++.|+ +.. -+++++++++..++...+.. ..+|.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~---~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEP---GEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCT---TSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCc---CCcCEEE
Confidence 57799999999999999999986 7899999999999999984 442 25799999998886554432 4689887
Q ss_pred EcC
Q psy2380 319 FDL 321 (733)
Q Consensus 319 ~DL 321 (733)
+++
T Consensus 114 ~~~ 116 (213)
T 2fca_A 114 LNF 116 (213)
T ss_dssp EES
T ss_pred EEC
Confidence 643
No 69
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.82 E-value=0.0018 Score=66.80 Aligned_cols=73 Identities=12% Similarity=0.242 Sum_probs=60.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~d 315 (733)
+|+..++|.-+|.|..+..+++++. ++++|+|+|.++++++.|+ ++. ..+++++++++.++. .+++|
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-------~~~~d 141 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-------IENAS 141 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-------CCSEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-------ccccc
Confidence 5789999999999999999999874 5679999999999999994 553 468999999887653 35688
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|+..+
T Consensus 142 ~v~~~~ 147 (261)
T 4gek_A 142 MVVLNF 147 (261)
T ss_dssp EEEEES
T ss_pred cceeee
Confidence 888765
No 70
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.81 E-value=0.0016 Score=62.08 Aligned_cols=85 Identities=15% Similarity=0.259 Sum_probs=63.0
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
.+.+++.+.. ..+++.++|.-.|.|..+..+++. +..+|+|+|.|+++++.|+ ++. .++++++++++.+.
T Consensus 19 ~~~~~~~l~~--~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 93 (177)
T 2esr_A 19 RGAIFNMIGP--YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA- 93 (177)
T ss_dssp HHHHHHHHCS--CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-
T ss_pred HHHHHHHHHh--hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-
Confidence 3445555542 146789999999999999999986 4579999999999999984 442 25799999887653
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
++... +++|.|+.|.
T Consensus 94 --~~~~~-~~fD~i~~~~ 108 (177)
T 2esr_A 94 --IDCLT-GRFDLVFLDP 108 (177)
T ss_dssp --HHHBC-SCEEEEEECC
T ss_pred --HHhhc-CCCCEEEECC
Confidence 33221 3599999873
No 71
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.76 E-value=0.0026 Score=62.90 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=61.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|.-.|.|..+..+++.. |+.+++|+|.++++++.|+ +.. -+++++++++..++.+.+.. +++|.|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~---~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFED---GEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCT---TCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCC---CCCCEE
Confidence 357899999999999999999986 6889999999999999984 442 26899999998876543322 469999
Q ss_pred EEc
Q psy2380 318 LFD 320 (733)
Q Consensus 318 l~D 320 (733)
+.+
T Consensus 116 ~~~ 118 (214)
T 1yzh_A 116 YLN 118 (214)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 72
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.75 E-value=0.0034 Score=61.96 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=61.8
Q ss_pred HHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHH
Q psy2380 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDII 305 (733)
Q Consensus 231 Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~ 305 (733)
.+++.+.. .+++.++|.-.|.|..+..+++. .++|+|+|.++++++.|+ +.+ .++++++++++.+.
T Consensus 46 ~~l~~l~~---~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--- 116 (204)
T 3njr_A 46 LTLAALAP---RRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA--- 116 (204)
T ss_dssp HHHHHHCC---CTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG---
T ss_pred HHHHhcCC---CCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh---
Confidence 34555555 67889999999999999999987 679999999999999984 432 34899999988763
Q ss_pred HHhCCCCcccEEEEcC
Q psy2380 306 LKKYNIKKIDGILFDL 321 (733)
Q Consensus 306 l~~~~~~~~dgil~DL 321 (733)
+... +++|.|+.+-
T Consensus 117 ~~~~--~~~D~v~~~~ 130 (204)
T 3njr_A 117 LADL--PLPEAVFIGG 130 (204)
T ss_dssp GTTS--CCCSEEEECS
T ss_pred cccC--CCCCEEEECC
Confidence 2222 4689998653
No 73
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.70 E-value=0.0043 Score=62.96 Aligned_cols=76 Identities=8% Similarity=0.088 Sum_probs=59.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHH----HhcccCCCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVS----LGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~----~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+|+..++|...|.|+-|..+.+..+++|+|+|+|.++..++ .+++ ..++.++++...+...+... .+++|.|
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~--~~~~D~I 150 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSV--VENVDVL 150 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTT--CCCEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhcc--ccceEEE
Confidence 78999999999999999999999988999999999997753 3332 25799988877664322111 2479999
Q ss_pred EEcC
Q psy2380 318 LFDL 321 (733)
Q Consensus 318 l~DL 321 (733)
+.|.
T Consensus 151 ~~d~ 154 (232)
T 3id6_C 151 YVDI 154 (232)
T ss_dssp EECC
T ss_pred EecC
Confidence 9884
No 74
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.69 E-value=0.0051 Score=61.91 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=61.3
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDI 304 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~ 304 (733)
....++.+.. +++..++|.-.|.|..+..+++.. .+++|+|.++++++.++ ++. -++++++++++.++.
T Consensus 10 ~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 82 (239)
T 1xxl_A 10 LGLMIKTAEC---RAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP- 82 (239)
T ss_dssp HHHHHHHHTC---CTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-
T ss_pred cchHHHHhCc---CCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-
Confidence 3456677776 788999999999999999998774 48999999999999984 442 257888888876643
Q ss_pred HHHhCCCCcccEEEE
Q psy2380 305 ILKKYNIKKIDGILF 319 (733)
Q Consensus 305 ~l~~~~~~~~dgil~ 319 (733)
..-+++|.|+.
T Consensus 83 ----~~~~~fD~v~~ 93 (239)
T 1xxl_A 83 ----FPDDSFDIITC 93 (239)
T ss_dssp ----SCTTCEEEEEE
T ss_pred ----CCCCcEEEEEE
Confidence 11146888876
No 75
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.68 E-value=0.0031 Score=63.96 Aligned_cols=78 Identities=13% Similarity=0.152 Sum_probs=60.6
Q ss_pred CCCEEEEEccCCChhHHHHHHH---cCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILER---LGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~---~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|+.|..+++. +.++++|+|+|+++++++.|+.+ .+++++++++..+... ++...-.++|.|++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~-~~~v~~~~gD~~~~~~-l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD-MENITLHQGDCSDLTT-FEHLREMAHPLIFI 158 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG-CTTEEEEECCSSCSGG-GGGGSSSCSSEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc-CCceEEEECcchhHHH-HHhhccCCCCEEEE
Confidence 4579999999999999999987 46789999999999999988654 4689999998877522 12111125899987
Q ss_pred cCC
Q psy2380 320 DLG 322 (733)
Q Consensus 320 DLG 322 (733)
|.+
T Consensus 159 d~~ 161 (236)
T 2bm8_A 159 DNA 161 (236)
T ss_dssp ESS
T ss_pred CCc
Confidence 654
No 76
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.67 E-value=0.0049 Score=60.73 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=67.1
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDII 305 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~ 305 (733)
+++++.+.. .++..++|.-.|.|..+..+++..+++++++|+|.++++++.++ ++. -++++++++++.++.
T Consensus 27 ~~~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-- 101 (219)
T 3dh0_A 27 EKVLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-- 101 (219)
T ss_dssp HHHHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--
T ss_pred HHHHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--
Confidence 455666655 67889999999999999999999878899999999999999984 442 247999999887753
Q ss_pred HHhCCCCcccEEEEcC
Q psy2380 306 LKKYNIKKIDGILFDL 321 (733)
Q Consensus 306 l~~~~~~~~dgil~DL 321 (733)
..-+++|.|+...
T Consensus 102 ---~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 102 ---LPDNTVDFIFMAF 114 (219)
T ss_dssp ---SCSSCEEEEEEES
T ss_pred ---CCCCCeeEEEeeh
Confidence 1124799999763
No 77
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.67 E-value=0.0052 Score=64.16 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=45.3
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI 287 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l 287 (733)
..+..++.+.+. ..+++.++|.-.|.|..+..+++++ +..+++|+|+|+++++.|+ ++
T Consensus 32 ~~~~~l~~l~~~-~~~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 32 CEDGRLRVLKPE-WFRGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp --CGGGGTSCGG-GTTTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC
T ss_pred chhHHHHhhhhh-hcCCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHH
Confidence 344556666551 1257899999999999999999997 5579999999999999984 44
No 78
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.66 E-value=0.0043 Score=62.46 Aligned_cols=71 Identities=11% Similarity=0.065 Sum_probs=55.8
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++..++|.-.|.|..+..+++.. ..+++|+|.++++++.|+ ++. ..++.+++.++.++.. .-+++|.|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP-----EPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC-----CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC-----CCCCEEEEE
Confidence 57899999999999999999875 569999999999999984 443 2368888888766431 113689888
Q ss_pred Ec
Q psy2380 319 FD 320 (733)
Q Consensus 319 ~D 320 (733)
.+
T Consensus 152 ~~ 153 (241)
T 2ex4_A 152 IQ 153 (241)
T ss_dssp EE
T ss_pred Ec
Confidence 66
No 79
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.63 E-value=0.0053 Score=58.19 Aligned_cols=82 Identities=18% Similarity=0.274 Sum_probs=62.9
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchH
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELD 303 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~ 303 (733)
+...+++.+.. .++..++|.-.|.|..+..+++ +..+++|+|.++++++.++ ++. -++++++++++.+
T Consensus 23 ~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-- 94 (183)
T 2yxd_A 23 IRAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-- 94 (183)
T ss_dssp HHHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--
T ss_pred HHHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--
Confidence 33445555555 6778999999999999999987 5789999999999999984 443 2579999888765
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
.++. +++|.|+.+.
T Consensus 95 -~~~~---~~~D~i~~~~ 108 (183)
T 2yxd_A 95 -VLDK---LEFNKAFIGG 108 (183)
T ss_dssp -HGGG---CCCSEEEECS
T ss_pred -cccC---CCCcEEEECC
Confidence 2333 4689998863
No 80
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.62 E-value=0.0037 Score=60.48 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=58.2
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
+++.++|...|.|..+..+++. +..+|+|+|.|+++++.|+ +++ -+++++++++..++. ....-+++|.|+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~fD~i~ 118 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV---AAGTTSPVDLVL 118 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH---HHCCSSCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH---hhccCCCccEEE
Confidence 5789999999999999998875 4579999999999999984 443 258999999876653 322235799999
Q ss_pred EcC
Q psy2380 319 FDL 321 (733)
Q Consensus 319 ~DL 321 (733)
.|.
T Consensus 119 ~~~ 121 (189)
T 3p9n_A 119 ADP 121 (189)
T ss_dssp ECC
T ss_pred ECC
Confidence 873
No 81
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.62 E-value=0.0054 Score=61.48 Aligned_cols=74 Identities=12% Similarity=0.037 Sum_probs=58.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
+++..++|.-.|.|..+..+++..+ .++|+|+|.++++++.++ +.. .+++.+++++..+...++. .. .++|.|+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~-~~~D~v~ 148 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN-IV-EKVDVIY 148 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TS-CCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc-cC-ccEEEEE
Confidence 5788999999999999999999975 789999999999999884 332 3689999988877433222 12 4789988
No 82
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.61 E-value=0.0041 Score=66.52 Aligned_cols=68 Identities=22% Similarity=0.347 Sum_probs=55.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.++..++|+..|.|+.|.. ++ ...+|+|+|.+++|++.++ +++ .+++++++++..+.. .++|.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------~~fD~ 261 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------VKGNR 261 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--------CCEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--------CCCcE
Confidence 3578999999999999999 76 3679999999999999984 442 358999999876653 46999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|++|.
T Consensus 262 Vi~dp 266 (336)
T 2yx1_A 262 VIMNL 266 (336)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99874
No 83
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.59 E-value=0.0058 Score=63.75 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=63.8
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
.+.+++.+.. +++..++|...|.|..+..+++. ++.+|+|+|+++++++.|+ +.. .+|++++++++.+.
T Consensus 112 v~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~- 185 (284)
T 1nv8_A 112 VELALELIRK---YGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP- 185 (284)
T ss_dssp HHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-
T ss_pred HHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-
Confidence 3445555544 45679999999999999999988 7799999999999999984 432 45799999987663
Q ss_pred HHHHhCCCCcc---cEEEEcCCCC
Q psy2380 304 IILKKYNIKKI---DGILFDLGIS 324 (733)
Q Consensus 304 ~~l~~~~~~~~---dgil~DLGvs 324 (733)
+. +++ |.|+.|-=|.
T Consensus 186 --~~----~~f~~~D~IvsnPPyi 203 (284)
T 1nv8_A 186 --FK----EKFASIEMILSNPPYV 203 (284)
T ss_dssp --GG----GGTTTCCEEEECCCCB
T ss_pred --cc----cccCCCCEEEEcCCCC
Confidence 22 246 9999884443
No 84
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.56 E-value=0.0054 Score=62.58 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=62.0
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCC--CCccc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYN--IKKID 315 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~--~~~~d 315 (733)
++..++|.-.|.|..+..+++.++++++|+++|.++++++.|+ +++ .+|+++++++..+.-..+...+ -+++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 4578999999999999999999876899999999999999984 442 3689999988765432232211 24799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|+.|-
T Consensus 159 ~V~~d~ 164 (247)
T 1sui_A 159 FIFVDA 164 (247)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999984
No 85
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.56 E-value=0.0067 Score=62.28 Aligned_cols=80 Identities=11% Similarity=0.169 Sum_probs=62.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHH-HHH-hCCC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDI-ILK-KYNI 311 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~-~l~-~~~~ 311 (733)
++++.++|...|.|..+..++++. +..+++|+|+|+++++.|+ ++. .+|++++++++.+... ... ...-
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 467899999999999999999986 6789999999999999984 432 2479999999988732 221 1222
Q ss_pred CcccEEEEcCC
Q psy2380 312 KKIDGILFDLG 322 (733)
Q Consensus 312 ~~~dgil~DLG 322 (733)
.++|.|+.|.-
T Consensus 114 ~~fD~Vv~nPP 124 (260)
T 2ozv_A 114 EHFHHVIMNPP 124 (260)
T ss_dssp TCEEEEEECCC
T ss_pred CCcCEEEECCC
Confidence 57999998843
No 86
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.56 E-value=0.005 Score=57.90 Aligned_cols=75 Identities=13% Similarity=0.100 Sum_probs=57.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
++..++|...|.|..+..+++.. + +++|+|.|+++++.|+ ++. +-+++++++++.+....+... -+++|.|+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQ-GERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHT-TCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhcc-CCceEEEEE
Confidence 57899999999999999999873 4 3999999999999984 443 227999999887743333321 136999998
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
|.
T Consensus 117 ~~ 118 (171)
T 1ws6_A 117 AP 118 (171)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 87
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.53 E-value=0.0059 Score=59.70 Aligned_cols=84 Identities=18% Similarity=0.202 Sum_probs=65.5
Q ss_pred hhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccc
Q psy2380 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTE 301 (733)
Q Consensus 227 vll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~ 301 (733)
.+.+++++.+.. +++ .++|.-.|.|..+..++++ ++.+++|+|.++++++.|+ ++. .++++++++++.+
T Consensus 31 ~~~~~~~~~~~~---~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 31 IIAENIINRFGI---TAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHHHHCC---CEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred HHHHHHHHhcCC---CCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence 344556666654 444 9999999999999999988 5689999999999999984 442 4589999999887
Q ss_pred hHHHHHhCCCCcccEEEEcC
Q psy2380 302 LDIILKKYNIKKIDGILFDL 321 (733)
Q Consensus 302 ~~~~l~~~~~~~~dgil~DL 321 (733)
+. ..-+++|.|+.+.
T Consensus 105 ~~-----~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 105 IP-----IEDNYADLIVSRG 119 (219)
T ss_dssp CS-----SCTTCEEEEEEES
T ss_pred CC-----CCcccccEEEECc
Confidence 64 1124799999864
No 88
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.52 E-value=0.0029 Score=61.76 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=52.4
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCC--CcEEEEccCccchHHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITD--SRFSIIHNCFTELDIIL 306 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~--~r~~~~~~~f~~~~~~l 306 (733)
+.+++.+.. ..++..++|...|.|..+..+++.. ++++++|+|.++++++.|+ ++.. .+++++++++.+ .+
T Consensus 19 ~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~---~~ 92 (215)
T 4dzr_A 19 EEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE---WL 92 (215)
T ss_dssp HHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHHH---HH
T ss_pred HHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh---hh
Confidence 444444432 1357899999999999999999985 7789999999999999984 4432 267777766554 33
Q ss_pred Hh--CCCCcccEEEEcCCC
Q psy2380 307 KK--YNIKKIDGILFDLGI 323 (733)
Q Consensus 307 ~~--~~~~~~dgil~DLGv 323 (733)
.. ...+++|.|+.|.-+
T Consensus 93 ~~~~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPY 111 (215)
T ss_dssp HHHHHTTCCBSEEEECCCC
T ss_pred hhhhhccCcccEEEECCCC
Confidence 32 112479999998655
No 89
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.52 E-value=0.0044 Score=62.35 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=60.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHh-CCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKK-YNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~-~~~~~~d 315 (733)
.++..++|...|.|..+..+++.++++++++++|.++++++.|+ ++. .+++++++++..+...-+.. ...+++|
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 34678999999999999999999866899999999999999984 442 36899999887553222221 1114699
Q ss_pred EEEEc
Q psy2380 316 GILFD 320 (733)
Q Consensus 316 gil~D 320 (733)
.|++|
T Consensus 151 ~V~~d 155 (232)
T 3cbg_A 151 LIFID 155 (232)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99987
No 90
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.51 E-value=0.0033 Score=64.32 Aligned_cols=78 Identities=13% Similarity=0.221 Sum_probs=62.3
Q ss_pred c-CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCccc
Q psy2380 242 R-INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKID 315 (733)
Q Consensus 242 ~-~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~d 315 (733)
+ +++.++|...|.|.-+..++++. + ++++|+|+|+++++.|+ ++. .+|++++++++.++...+ .-+++|
T Consensus 47 ~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~---~~~~fD 121 (259)
T 3lpm_A 47 PIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI---PKERAD 121 (259)
T ss_dssp CSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS---CTTCEE
T ss_pred CCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh---ccCCcc
Confidence 5 68899999999999999999874 3 49999999999999984 442 468999999998865422 225799
Q ss_pred EEEEcCCCC
Q psy2380 316 GILFDLGIS 324 (733)
Q Consensus 316 gil~DLGvs 324 (733)
.|+.|--+.
T Consensus 122 ~Ii~npPy~ 130 (259)
T 3lpm_A 122 IVTCNPPYF 130 (259)
T ss_dssp EEEECCCC-
T ss_pred EEEECCCCC
Confidence 999986553
No 91
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.46 E-value=0.0068 Score=60.74 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=59.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhccc-C-CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-T-DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l-~-~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++..++|.-.|.|..+..+++..++.++|+|+|.++++++.+.+. . .+++++++++..+...+ ... ..++|.|+.
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~-~~~-~~~~D~V~~ 153 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKY-RML-IAMVDVIFA 153 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGG-GGG-CCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhh-ccc-CCcEEEEEE
Confidence 6788999999999999999999987789999999998876654211 1 26899999988874321 111 147999998
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
|.
T Consensus 154 ~~ 155 (233)
T 2ipx_A 154 DV 155 (233)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 92
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.46 E-value=0.01 Score=61.86 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=69.3
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
++.+++.+.. +++..++|.-.|.|+.+..++++.+ ++|+|+|.++++++.|+ ++. .++++++++++.++
T Consensus 61 ~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 61 RKLALDKLNL---EPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF- 134 (302)
T ss_dssp HHHHHHTTCC---CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-
T ss_pred HHHHHHHcCC---CCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-
Confidence 3455666655 6788999999999999999999873 79999999999999984 442 35899999998775
Q ss_pred HHHHhCCCCcccEEEEcCCCCccccCCCC
Q psy2380 304 IILKKYNIKKIDGILFDLGISSNQINNEL 332 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DLGvss~q~~~~~ 332 (733)
-+++|.|+... +-+++.|++
T Consensus 135 -------~~~fD~v~~~~--~~~~~~d~~ 154 (302)
T 3hem_A 135 -------DEPVDRIVSLG--AFEHFADGA 154 (302)
T ss_dssp -------CCCCSEEEEES--CGGGTTCCS
T ss_pred -------CCCccEEEEcc--hHHhcCccc
Confidence 14799999773 334555544
No 93
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.40 E-value=0.0028 Score=62.38 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=57.0
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C---CcEEEEccCccchHHHHHhCCCCc-cc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D---SRFSIIHNCFTELDIILKKYNIKK-ID 315 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~---~r~~~~~~~f~~~~~~l~~~~~~~-~d 315 (733)
++..++|...|.|+.+..++++. ..+|+|+|.|+++++.|+ +++ + ++++++++++.++ +....-++ +|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF---LKQPQNQPHFD 127 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH---TTSCCSSCCEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH---HHhhccCCCCC
Confidence 56799999999999999988763 369999999999999984 442 2 5899999886543 22211246 89
Q ss_pred EEEEcCC
Q psy2380 316 GILFDLG 322 (733)
Q Consensus 316 gil~DLG 322 (733)
.|++|.-
T Consensus 128 ~I~~~~~ 134 (201)
T 2ift_A 128 VVFLDPP 134 (201)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998643
No 94
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.40 E-value=0.0094 Score=59.25 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=60.8
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCC-CCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYN-IKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~-~~~~d 315 (733)
.++..++|.-.|.|..+..+++.++++++++++|.++++++.|+ ++. .+++++++++..+...-+...+ .+++|
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 34679999999999999999998866899999999999999984 442 3689999988765432232211 13699
Q ss_pred EEEEc
Q psy2380 316 GILFD 320 (733)
Q Consensus 316 gil~D 320 (733)
.|+.|
T Consensus 148 ~v~~d 152 (229)
T 2avd_A 148 VAVVD 152 (229)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 95
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.39 E-value=0.0034 Score=61.88 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=59.0
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++.++|...|.|..|..+++.++++++|+++|.++++++.|+ +++ .+++++++++..+ .++... + +|.|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~-~-fD~v 130 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG---IAAGQR-D-IDIL 130 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH---HHTTCC-S-EEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH---HhccCC-C-CCEE
Confidence 4678999999999999999998865899999999999999984 442 3589999987654 333332 4 8999
Q ss_pred EEc
Q psy2380 318 LFD 320 (733)
Q Consensus 318 l~D 320 (733)
+.|
T Consensus 131 ~~~ 133 (210)
T 3c3p_A 131 FMD 133 (210)
T ss_dssp EEE
T ss_pred EEc
Confidence 988
No 96
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.38 E-value=0.01 Score=58.04 Aligned_cols=88 Identities=8% Similarity=0.001 Sum_probs=67.2
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCcc
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~ 300 (733)
.|.+...+++.+.. +++..++|.-.|.|..+..+++. .++|+|+|.++++++.|+ ++. -+++++++++..
T Consensus 62 ~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 135 (210)
T 3lbf_A 62 QPYMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGW 135 (210)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcc
Confidence 34455556666666 77899999999999999999987 479999999999999984 443 247999998876
Q ss_pred chHHHHHhCCCCcccEEEEcCCC
Q psy2380 301 ELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 301 ~~~~~l~~~~~~~~dgil~DLGv 323 (733)
+... . -.++|.|+.+.+.
T Consensus 136 ~~~~---~--~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 136 QGWQ---A--RAPFDAIIVTAAP 153 (210)
T ss_dssp GCCG---G--GCCEEEEEESSBC
T ss_pred cCCc---c--CCCccEEEEccch
Confidence 5321 1 1479999998544
No 97
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.33 E-value=0.013 Score=58.09 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=67.9
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcC----CCcEEEEEeCCHHHHHHhc-ccC--------CCcE
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLG----KKGRLIAIDKDTESVSLGN-KIT--------DSRF 292 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~----~~~~l~~~D~D~~a~~~a~-~l~--------~~r~ 292 (733)
|.+...+++.+.. .++++..++|.-.|.|..+..+++..+ ++++|+|+|.++++++.|+ ++. .+++
T Consensus 64 p~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 64 PHMHALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp HHHHHHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred hHHHHHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 3344455555531 016788999999999999999999876 6789999999999999984 442 2589
Q ss_pred EEEccCccchH-HH-HHhCCCCcccEEEEcCCC
Q psy2380 293 SIIHNCFTELD-II-LKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 293 ~~~~~~f~~~~-~~-l~~~~~~~~dgil~DLGv 323 (733)
++++++..+.. .. ... .++|.|+.+-..
T Consensus 143 ~~~~~d~~~~~~~~~~~~---~~fD~I~~~~~~ 172 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKKEL---GLFDAIHVGASA 172 (227)
T ss_dssp EEEECCGGGCCHHHHHHH---CCEEEEEECSBB
T ss_pred EEEECChHhcccccCccC---CCcCEEEECCch
Confidence 99998876632 11 122 369999887654
No 98
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.32 E-value=0.0071 Score=63.57 Aligned_cols=91 Identities=16% Similarity=0.265 Sum_probs=72.9
Q ss_pred HhhhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCcc
Q psy2380 223 IMGFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFT 300 (733)
Q Consensus 223 ll~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~ 300 (733)
+..+...+.+++.+.. ++++.++|.-.|.|.-|..++++ ..+|+|+|+|+++++.++ ++. .++++++++++.
T Consensus 33 L~d~~i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l 106 (295)
T 3gru_A 33 LIDKNFVNKAVESANL---TKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDAL 106 (295)
T ss_dssp ECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTT
T ss_pred cCCHHHHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchh
Confidence 4456667778888876 78889999999999999999987 368999999999999984 553 468999999988
Q ss_pred chHHHHHhCCCCcccEEEEcCCCC
Q psy2380 301 ELDIILKKYNIKKIDGILFDLGIS 324 (733)
Q Consensus 301 ~~~~~l~~~~~~~~dgil~DLGvs 324 (733)
+++ ++. ..+|.|+.|+-|.
T Consensus 107 ~~~--~~~---~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 107 KVD--LNK---LDFNKVVANLPYQ 125 (295)
T ss_dssp TSC--GGG---SCCSEEEEECCGG
T ss_pred hCC--ccc---CCccEEEEeCccc
Confidence 753 222 2589999887763
No 99
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.32 E-value=0.011 Score=61.68 Aligned_cols=78 Identities=22% Similarity=0.251 Sum_probs=62.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
++|.+++|+-.|-|+-|..++++ ..++|+|+|.+|+|++.++ +++ +++++++++...++. . -..+|-
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~---~---~~~~D~ 195 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---G---ENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---C---CSCEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc---c---ccCCCE
Confidence 57899999999999999999976 3479999999999999983 442 578999998766542 1 146999
Q ss_pred EEEcCCCCccc
Q psy2380 317 ILFDLGISSNQ 327 (733)
Q Consensus 317 il~DLGvss~q 327 (733)
|++|+=.+|.+
T Consensus 196 Vi~~~p~~~~~ 206 (278)
T 3k6r_A 196 ILMGYVVRTHE 206 (278)
T ss_dssp EEECCCSSGGG
T ss_pred EEECCCCcHHH
Confidence 99987666543
No 100
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.31 E-value=0.015 Score=57.19 Aligned_cols=90 Identities=14% Similarity=0.126 Sum_probs=68.6
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccc
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTE 301 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~ 301 (733)
|.+...+++.+.. +++..++|.-.|.|..+..+++..+++++++++|.++++++.++ ++. -+++++++++..+
T Consensus 63 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 63 IHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL 139 (215)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG
T ss_pred HHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc
Confidence 4455566666665 67889999999999999999999877789999999999999984 442 2468888887643
Q ss_pred hHHHHHhCCCCcccEEEEcCCC
Q psy2380 302 LDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 302 ~~~~l~~~~~~~~dgil~DLGv 323 (733)
. +... .++|.|+.+.++
T Consensus 140 ~---~~~~--~~fD~v~~~~~~ 156 (215)
T 2yxe_A 140 G---YEPL--APYDRIYTTAAG 156 (215)
T ss_dssp C---CGGG--CCEEEEEESSBB
T ss_pred C---CCCC--CCeeEEEECCch
Confidence 1 1111 369999988655
No 101
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.28 E-value=0.015 Score=61.09 Aligned_cols=73 Identities=14% Similarity=0.056 Sum_probs=60.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|.=.|.||-|..++.+. ++++|+|+|+|+++++.|+ +++ -+|+++++++..++. . .++|.|
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----d---~~FDvV 192 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----G---LEFDVL 192 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----G---CCCSEE
T ss_pred CCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----C---CCcCEE
Confidence 788999999999999998888775 6899999999999999995 432 268999999988753 1 479999
Q ss_pred EEcCC
Q psy2380 318 LFDLG 322 (733)
Q Consensus 318 l~DLG 322 (733)
+.+.+
T Consensus 193 ~~~a~ 197 (298)
T 3fpf_A 193 MVAAL 197 (298)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 87643
No 102
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.28 E-value=0.0085 Score=59.49 Aligned_cols=74 Identities=11% Similarity=0.023 Sum_probs=55.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh----cccCCCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG----NKITDSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a----~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|.-.|.|..+..+.+..+ +++|+|+|.++++++.. ++ .+++.++.++..+...+.. .. +++|.|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~--~~~v~~~~~d~~~~~~~~~-~~-~~fD~V 130 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE--RNNIIPLLFDASKPWKYSG-IV-EKVDLI 130 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH--CSSEEEECSCTTCGGGTTT-TC-CCEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc--CCCeEEEEcCCCCchhhcc-cc-cceeEE
Confidence 6788999999999999999999875 78999999999876543 32 2468888876665432211 11 579999
Q ss_pred EEc
Q psy2380 318 LFD 320 (733)
Q Consensus 318 l~D 320 (733)
+.|
T Consensus 131 ~~~ 133 (210)
T 1nt2_A 131 YQD 133 (210)
T ss_dssp EEC
T ss_pred EEe
Confidence 987
No 103
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.27 E-value=0.0067 Score=61.98 Aligned_cols=75 Identities=11% Similarity=-0.056 Sum_probs=56.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
.++..++|.-.|.|..+..++... |+++|+|+|.++++++.|+ +.. -+++++++++..++... ...-+++|.|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~--~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE--AGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS--TTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc--cccCCCceEE
Confidence 457899999999999999999876 7899999999999999984 332 24699999987654310 0011468988
Q ss_pred EE
Q psy2380 318 LF 319 (733)
Q Consensus 318 l~ 319 (733)
+.
T Consensus 156 ~s 157 (249)
T 3g89_A 156 VA 157 (249)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 104
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.26 E-value=0.015 Score=56.72 Aligned_cols=71 Identities=18% Similarity=0.282 Sum_probs=57.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
.++..++|...|.|+.+..+++. + ..+++|+|.|+++++.++ ++. +-+++++++++.+++ .++|.|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN--------SRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC--------CCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC--------CCCCEEE
Confidence 46789999999999999999876 2 358999999999999984 443 227999999887752 2689999
Q ss_pred EcCC
Q psy2380 319 FDLG 322 (733)
Q Consensus 319 ~DLG 322 (733)
.|.=
T Consensus 118 ~~~p 121 (207)
T 1wy7_A 118 MNPP 121 (207)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8754
No 105
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.26 E-value=0.01 Score=60.11 Aligned_cols=90 Identities=18% Similarity=0.257 Sum_probs=57.2
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEE-ccCccchHHHHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSII-HNCFTELDIILK 307 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~-~~~f~~~~~~l~ 307 (733)
+.++++.+.. ..++..++|.-+|.|+.|..++++ + ..+|+|+|.++++++.|++- ..++... ..|+..+.. .
T Consensus 25 L~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~-~~~~~~~~~~~~~~~~~--~ 97 (232)
T 3opn_A 25 LEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRS-DERVVVMEQFNFRNAVL--A 97 (232)
T ss_dssp HHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHT-CTTEEEECSCCGGGCCG--G
T ss_pred HHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHh-CccccccccceEEEeCH--h
Confidence 4556666654 024569999999999999999987 2 35999999999999987432 2344433 234433321 1
Q ss_pred hCCCCcccEEEEcCCCCc
Q psy2380 308 KYNIKKIDGILFDLGISS 325 (733)
Q Consensus 308 ~~~~~~~dgil~DLGvss 325 (733)
......+|.+.+|+=+++
T Consensus 98 ~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp GCCSCCCSEEEECCSSSC
T ss_pred HcCcCCCCEEEEEEEhhh
Confidence 111112577777776554
No 106
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.26 E-value=0.018 Score=63.00 Aligned_cols=88 Identities=10% Similarity=0.203 Sum_probs=67.1
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcc-c------------CCCcE
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK-I------------TDSRF 292 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~-l------------~~~r~ 292 (733)
|..+.++++.+.. ++++.++|.-.|.|.-+..++... +..+++|+|+++++++.|++ . ..+++
T Consensus 159 ~~~i~~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 159 FDLVAQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred HHHHHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 4455677777776 789999999999999999999876 44589999999999988842 1 12689
Q ss_pred EEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 293 SIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 293 ~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+++++++.+++-. .. +..+|.|+.+
T Consensus 235 efi~GD~~~lp~~-d~--~~~aDVVf~N 259 (438)
T 3uwp_A 235 TLERGDFLSEEWR-ER--IANTSVIFVN 259 (438)
T ss_dssp EEEECCTTSHHHH-HH--HHTCSEEEEC
T ss_pred EEEECcccCCccc-cc--cCCccEEEEc
Confidence 9999999987532 11 1257877764
No 107
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.24 E-value=0.012 Score=61.49 Aligned_cols=87 Identities=18% Similarity=0.304 Sum_probs=68.7
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCc
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCF 299 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f 299 (733)
.+...+.+++.+.. .+++.++|.-.|.|..|..+++.. .+|+|+|.|+++++.++ ++. .++++++++++
T Consensus 13 d~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 13 NPLIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp CHHHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 45566777777776 678899999999999999999883 58999999999999984 443 25899999988
Q ss_pred cchHHHHHhCCCCcccEEEEcCCCC
Q psy2380 300 TELDIILKKYNIKKIDGILFDLGIS 324 (733)
Q Consensus 300 ~~~~~~l~~~~~~~~dgil~DLGvs 324 (733)
.+++ .+.+|.|+.|+-++
T Consensus 87 ~~~~-------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 87 LKTD-------LPFFDTCVANLPYQ 104 (285)
T ss_dssp TTSC-------CCCCSEEEEECCGG
T ss_pred eccc-------chhhcEEEEecCcc
Confidence 7642 23578888887543
No 108
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.21 E-value=0.009 Score=59.73 Aligned_cols=76 Identities=11% Similarity=0.159 Sum_probs=59.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccch-HHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTEL-DIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~-~~~l~~~~~~~~dg 316 (733)
+++.+++|.-+|.|.++..+++.. |+..++|+|.++++++.|+ +.. -+++++++++..++ ...+. -.++|.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~---~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIP---DNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSC---TTCEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcC---CCChhe
Confidence 356899999999999999999985 7899999999999999984 432 25799999987663 22222 257999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|.+++
T Consensus 109 v~~~~ 113 (218)
T 3dxy_A 109 VQLFF 113 (218)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 98764
No 109
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.20 E-value=0.0078 Score=62.29 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=59.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++..++|+-.|.|.-|..++++. +.++|+|+|.++++++.|+ +.+ -+++++++++..+. .. .+++|.|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-----~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-----KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-----TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-----cCCceEE
Confidence 567899999999999999999986 4689999999999999984 432 24688999987765 21 2479999
Q ss_pred EEcC
Q psy2380 318 LFDL 321 (733)
Q Consensus 318 l~DL 321 (733)
++|.
T Consensus 191 i~d~ 194 (272)
T 3a27_A 191 IMGY 194 (272)
T ss_dssp EECC
T ss_pred EECC
Confidence 9883
No 110
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.20 E-value=0.0078 Score=61.89 Aligned_cols=73 Identities=15% Similarity=0.237 Sum_probs=61.1
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccch
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTEL 302 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~ 302 (733)
.+...+.+++.+.. .+++.++|.-.|.|..|..++++. ++|+|+|+|+++++.++ ++. .++++++++++.++
T Consensus 14 d~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 14 DSFVLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQF 87 (255)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTC
T ss_pred CHHHHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhC
Confidence 35566777888876 788899999999999999999873 69999999999999984 554 46899999998775
Q ss_pred H
Q psy2380 303 D 303 (733)
Q Consensus 303 ~ 303 (733)
+
T Consensus 88 ~ 88 (255)
T 3tqs_A 88 D 88 (255)
T ss_dssp C
T ss_pred C
Confidence 3
No 111
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.19 E-value=0.012 Score=57.39 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=56.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
.+++.++|.-.|.|..+..+.+. +..+++|+|.|+++++.|+ ++. ++++++++..+++ +++|.|+.|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~~~~~--------~~~D~v~~~ 117 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG--GVNFMVADVSEIS--------GKYDTWIMN 117 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT--TSEEEECCGGGCC--------CCEEEEEEC
T ss_pred CCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC--CCEEEECcHHHCC--------CCeeEEEEC
Confidence 46789999999999999999876 3468999999999999995 443 7899999887752 479999986
Q ss_pred C
Q psy2380 321 L 321 (733)
Q Consensus 321 L 321 (733)
.
T Consensus 118 ~ 118 (200)
T 1ne2_A 118 P 118 (200)
T ss_dssp C
T ss_pred C
Confidence 3
No 112
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.16 E-value=0.01 Score=58.48 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=64.7
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----C----CcEEEEc
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----D----SRFSIIH 296 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~----~r~~~~~ 296 (733)
+...+.+++.+.. .++..++|.-.|.|..+..+++.. +..+++|+|.++++++.|+ ++. . +++++++
T Consensus 15 ~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (219)
T 3jwg_A 15 QQRLGTVVAVLKS---VNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhh---cCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe
Confidence 4445556666665 567899999999999999999875 6689999999999999994 443 1 2899999
Q ss_pred cCccchHHHHHhCCCCcccEEEEc
Q psy2380 297 NCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 297 ~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
++....... .+++|.|+..
T Consensus 91 ~d~~~~~~~-----~~~fD~V~~~ 109 (219)
T 3jwg_A 91 SSLVYRDKR-----FSGYDAATVI 109 (219)
T ss_dssp CCSSSCCGG-----GTTCSEEEEE
T ss_pred Ccccccccc-----cCCCCEEEEH
Confidence 987554311 1468988863
No 113
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.15 E-value=0.008 Score=60.87 Aligned_cols=75 Identities=11% Similarity=0.169 Sum_probs=58.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc--------C-CCcEEEEccCccc-hHHHHHhCC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI--------T-DSRFSIIHNCFTE-LDIILKKYN 310 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l--------~-~~r~~~~~~~f~~-~~~~l~~~~ 310 (733)
+++..++|.-+|.|.++..+++.. |+..++|+|+++++++.|+ ++ . .+++.+++++..+ +..++..
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~-- 121 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK-- 121 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT--
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC--
Confidence 356799999999999999999886 7789999999999999873 22 1 2579999998876 5554432
Q ss_pred CCcccEEEEc
Q psy2380 311 IKKIDGILFD 320 (733)
Q Consensus 311 ~~~~dgil~D 320 (733)
.++|.|.+.
T Consensus 122 -~~~D~v~~~ 130 (235)
T 3ckk_A 122 -GQLTKMFFL 130 (235)
T ss_dssp -TCEEEEEEE
T ss_pred -cCeeEEEEe
Confidence 468988753
No 114
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.14 E-value=0.014 Score=57.57 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=63.8
Q ss_pred hhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----C----CcEEEEcc
Q psy2380 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----D----SRFSIIHN 297 (733)
Q Consensus 227 vll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~----~r~~~~~~ 297 (733)
...+.+.+.+.. .+++.++|.-.|.|..+..+++.. +..+++|+|.++++++.|+ ++. . ++++++++
T Consensus 16 ~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 16 QRMNGVVAALKQ---SNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHh---cCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 344556666665 677899999999999999999874 6689999999999999994 543 1 27999998
Q ss_pred CccchHHHHHhCCCCcccEEEEc
Q psy2380 298 CFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 298 ~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+....+.. .+++|.|+..
T Consensus 92 d~~~~~~~-----~~~fD~v~~~ 109 (217)
T 3jwh_A 92 ALTYQDKR-----FHGYDAATVI 109 (217)
T ss_dssp CTTSCCGG-----GCSCSEEEEE
T ss_pred Cccccccc-----CCCcCEEeeH
Confidence 87543311 1468988864
No 115
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.13 E-value=0.0093 Score=59.84 Aligned_cols=73 Identities=23% Similarity=0.290 Sum_probs=59.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C--CcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D--SRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~--~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
++..++|...|.|+.+..+++. .++|+|+|.++++++.|+ ++. + ++++++++++.++. .. .++|.|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~---~~~D~v 148 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---SF---LKADVV 148 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---GG---CCCSEE
T ss_pred CCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---cc---CCCCEE
Confidence 6789999999999999999986 379999999999999984 443 2 58999999887654 22 479999
Q ss_pred EEcCCCC
Q psy2380 318 LFDLGIS 324 (733)
Q Consensus 318 l~DLGvs 324 (733)
+.|.-++
T Consensus 149 ~~~~~~~ 155 (241)
T 3gdh_A 149 FLSPPWG 155 (241)
T ss_dssp EECCCCS
T ss_pred EECCCcC
Confidence 9985544
No 116
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.13 E-value=0.0059 Score=64.21 Aligned_cols=85 Identities=18% Similarity=0.196 Sum_probs=64.0
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCcc
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~ 300 (733)
.|...+.+++.+.. .+++.++|.-.|.|.-|..++++ .++|+|+|.|+++++.++ ++. .++++++++++.
T Consensus 27 ~~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 27 NPGILDKIIYAAKI---KSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred CHHHHHHHHHhcCC---CCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 45556777777766 67889999999999999999976 469999999999999984 442 257999998887
Q ss_pred chHHHHHhCCCCcccEEEEcCC
Q psy2380 301 ELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 301 ~~~~~l~~~~~~~~dgil~DLG 322 (733)
+++ .+++|.|+.|+-
T Consensus 101 ~~~-------~~~~D~Vv~n~p 115 (299)
T 2h1r_A 101 KTV-------FPKFDVCTANIP 115 (299)
T ss_dssp SSC-------CCCCSEEEEECC
T ss_pred hCC-------cccCCEEEEcCC
Confidence 653 236899998875
No 117
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.08 E-value=0.011 Score=59.88 Aligned_cols=76 Identities=9% Similarity=0.175 Sum_probs=58.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-----------CCcEEEEccCccc-hHHHHHh
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-----------DSRFSIIHNCFTE-LDIILKK 308 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-----------~~r~~~~~~~f~~-~~~~l~~ 308 (733)
+++..++|.-+|.|+.+..+++.. ++++++|+|+++++++.++ ++. -+++.+++++..+ +...++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~- 125 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE- 125 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc-
Confidence 357799999999999999999886 6789999999999999883 321 1479999988765 443322
Q ss_pred CCCCcccEEEEcC
Q psy2380 309 YNIKKIDGILFDL 321 (733)
Q Consensus 309 ~~~~~~dgil~DL 321 (733)
...+|.|++++
T Consensus 126 --~~~~d~v~~~~ 136 (246)
T 2vdv_E 126 --KGQLSKMFFCF 136 (246)
T ss_dssp --TTCEEEEEEES
T ss_pred --ccccCEEEEEC
Confidence 24688888654
No 118
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.016 Score=60.28 Aligned_cols=79 Identities=14% Similarity=0.142 Sum_probs=62.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-----CCcEEEEccCccchHHHHH--hCCCCc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-----DSRFSIIHNCFTELDIILK--KYNIKK 313 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-----~~r~~~~~~~f~~~~~~l~--~~~~~~ 313 (733)
+++..++|.-.|.|..+..+++.+++..+++|+|.++.+++.|+ ++. .++++++++++.++... . ...-++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~ 113 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL-GADSVDKQK 113 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG-CTTTTTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc-ccccccCCC
Confidence 46889999999999999999998767899999999999999984 331 46899999999886521 1 001147
Q ss_pred ccEEEEcC
Q psy2380 314 IDGILFDL 321 (733)
Q Consensus 314 ~dgil~DL 321 (733)
+|.|+...
T Consensus 114 fD~V~~~~ 121 (299)
T 3g5t_A 114 IDMITAVE 121 (299)
T ss_dssp EEEEEEES
T ss_pred eeEEeHhh
Confidence 99999864
No 119
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.05 E-value=0.019 Score=60.57 Aligned_cols=89 Identities=10% Similarity=0.198 Sum_probs=68.9
Q ss_pred hhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccch
Q psy2380 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTEL 302 (733)
Q Consensus 227 vll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~ 302 (733)
.+...+++.+.. +++..++|.-.|.|+.+..+++..+++++|+|+|.++++++.|+ ++. -++++++++++.+.
T Consensus 62 ~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 455666677766 78899999999999999999998754689999999999999984 442 24599999887763
Q ss_pred HHHHHhCCCCcccEEEEcCCC
Q psy2380 303 DIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~DLGv 323 (733)
.. .. +++|.|+.+-..
T Consensus 139 ~~---~~--~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 139 VP---EF--SPYDVIFVTVGV 154 (317)
T ss_dssp CG---GG--CCEEEEEECSBB
T ss_pred cc---cC--CCeEEEEEcCCH
Confidence 21 11 469999998654
No 120
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.05 E-value=0.0075 Score=65.14 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=62.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC---------CCcEEEEccCccchHHHHHhCCC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT---------DSRFSIIHNCFTELDIILKKYNI 311 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~---------~~r~~~~~~~f~~~~~~l~~~~~ 311 (733)
+||..++|++.|-||-|..|++.. ++++|+|+|+++.-++.. ++++ .+++.+.+.....+.....
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~---- 221 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEG---- 221 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHST----
T ss_pred CCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcc----
Confidence 789999999999999999999864 678999999999988765 2331 2578888877776654322
Q ss_pred CcccEEEEcCCCCc
Q psy2380 312 KKIDGILFDLGISS 325 (733)
Q Consensus 312 ~~~dgil~DLGvss 325 (733)
+++|.||+|==+|.
T Consensus 222 ~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 222 DTYDRVLVDVPCTT 235 (359)
T ss_dssp TCEEEEEEECCCCC
T ss_pred ccCCEEEECCccCC
Confidence 47999999988874
No 121
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.99 E-value=0.024 Score=57.24 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=65.9
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCC-CcEEEEccCccchHHHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITD-SRFSIIHNCFTELDIIL 306 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~-~r~~~~~~~f~~~~~~l 306 (733)
.+++++.+.. +++..++|.-.|.|..+..++++. +++++|+|.++++++.|+ +... ++++++++++.++.
T Consensus 44 ~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 115 (266)
T 3ujc_A 44 TKKILSDIEL---NENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--- 115 (266)
T ss_dssp HHHHTTTCCC---CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC---
T ss_pred HHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC---
Confidence 4556666655 678899999999999999999987 579999999999999995 4433 68999999887752
Q ss_pred HhCCCCcccEEEEcC
Q psy2380 307 KKYNIKKIDGILFDL 321 (733)
Q Consensus 307 ~~~~~~~~dgil~DL 321 (733)
..-+++|.|+...
T Consensus 116 --~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 116 --FPENNFDLIYSRD 128 (266)
T ss_dssp --CCTTCEEEEEEES
T ss_pred --CCCCcEEEEeHHH
Confidence 1125799998753
No 122
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=95.99 E-value=0.011 Score=64.80 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=57.7
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----C-CcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----D-SRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~-~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
++..++|++.|.|+.+.++.+. .++|+|+|+|+++++.|+ +++ + +++++++++..+.-..++. .++|.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~---~~fDv 166 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKT---FHPDY 166 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHH---HCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccC---CCceE
Confidence 4789999999999999988765 469999999999999983 442 2 5899999987764222221 26999
Q ss_pred EEEcCCC
Q psy2380 317 ILFDLGI 323 (733)
Q Consensus 317 il~DLGv 323 (733)
|++|=-+
T Consensus 167 V~lDPPr 173 (410)
T 3ll7_A 167 IYVDPAR 173 (410)
T ss_dssp EEECCEE
T ss_pred EEECCCC
Confidence 9987544
No 123
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.98 E-value=0.008 Score=65.22 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=61.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
+++..++|..+|.|+.+..+++.. +.++++|+|+|+++++.|+ ++. +++++++++++.++... .+++|.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~-----~~~fD~ 289 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY-----VDSVDF 289 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT-----CSCEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc-----cCCcCE
Confidence 567899999999999999999874 5679999999999999994 543 35899999999886421 147999
Q ss_pred EEEcCC
Q psy2380 317 ILFDLG 322 (733)
Q Consensus 317 il~DLG 322 (733)
|+.|.=
T Consensus 290 Ii~npP 295 (373)
T 3tm4_A 290 AISNLP 295 (373)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 998764
No 124
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=95.97 E-value=0.0071 Score=63.07 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=60.2
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccch
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTEL 302 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~-~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~ 302 (733)
+...+.+++.+.. +++..++|.-.|.|..|..++++..+ +++|+|+|+|+++++.++ +. .++++++++++.++
T Consensus 28 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 28 HGVIDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-GGGEEEEESCGGGC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-CCCcEEEECChhcC
Confidence 4455677777776 77889999999999999999998744 477999999999999984 43 46899999988765
No 125
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.96 E-value=0.018 Score=58.79 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=64.9
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
...+++.+.. ++++..++|.-.|.|..+..+++. +.++++|+|.++++++.|+ ++. .++++++++++.++.
T Consensus 34 ~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 34 TLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp HHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 3445555542 257889999999999999999987 5679999999999999984 442 368999999987764
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
..-+++|.|+...
T Consensus 110 -----~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 110 -----FRNEELDLIWSEG 122 (267)
T ss_dssp -----CCTTCEEEEEESS
T ss_pred -----CCCCCEEEEEEcC
Confidence 1124799998664
No 126
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.93 E-value=0.03 Score=55.60 Aligned_cols=88 Identities=10% Similarity=0.070 Sum_probs=66.8
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCC-CcEEEEccCccch
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITD-SRFSIIHNCFTEL 302 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~-~r~~~~~~~f~~~ 302 (733)
.|.+...+++.+.. +++..++|.-.|.|..+..+++.. .+++|+|.++++++.++ ++.. +++++++++..+.
T Consensus 55 ~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~ 128 (231)
T 1vbf_A 55 ALNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG 128 (231)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence 34455666666665 678899999999999999999874 79999999999999994 5542 2799999887651
Q ss_pred HHHHHhCCCCcccEEEEcCCC
Q psy2380 303 DIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~DLGv 323 (733)
+... .++|.|+.+..+
T Consensus 129 ---~~~~--~~fD~v~~~~~~ 144 (231)
T 1vbf_A 129 ---YEEE--KPYDRVVVWATA 144 (231)
T ss_dssp ---CGGG--CCEEEEEESSBB
T ss_pred ---cccC--CCccEEEECCcH
Confidence 1111 469999988544
No 127
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.89 E-value=0.025 Score=56.99 Aligned_cols=84 Identities=19% Similarity=0.284 Sum_probs=64.4
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccch
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTEL 302 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~ 302 (733)
....+++.+.. +.++..++|.-.|.|..+..+++.. + ++++|+|.++++++.++ +.. .+|++++++++.++
T Consensus 33 ~~~~~l~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 33 ATRKAVSFINE--LTDDAKIADIGCGTGGQTLFLADYV-K-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp HHHHHHTTSCC--CCTTCEEEEETCTTSHHHHHHHHHC-C-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHhc--CCCCCeEEEeCCCCCHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 33445555532 2567899999999999999999986 3 49999999999999984 442 46799999998776
Q ss_pred HHHHHhCCCCcccEEEEc
Q psy2380 303 DIILKKYNIKKIDGILFD 320 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~D 320 (733)
. ..-+++|.|+.+
T Consensus 109 ~-----~~~~~fD~v~~~ 121 (257)
T 3f4k_A 109 P-----FQNEELDLIWSE 121 (257)
T ss_dssp S-----SCTTCEEEEEEE
T ss_pred C-----CCCCCEEEEEec
Confidence 4 112479999877
No 128
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=95.87 E-value=0.012 Score=57.76 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=55.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C-CcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D-SRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~-~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++..++|...|.|..+..++++. ..+|+|+|.|+++++.|+ ++. + +++++++++..+ .+... -.++|.|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~---~~~~~-~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS---FLAQK-GTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH---HHSSC-CCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHH---HHhhc-CCCCCEEE
Confidence 56899999999999999988763 358999999999999984 443 2 589999987654 23221 24799998
Q ss_pred Ec
Q psy2380 319 FD 320 (733)
Q Consensus 319 ~D 320 (733)
+|
T Consensus 128 ~~ 129 (202)
T 2fpo_A 128 VD 129 (202)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 129
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.86 E-value=0.0087 Score=61.27 Aligned_cols=71 Identities=21% Similarity=0.220 Sum_probs=60.0
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccch
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTEL 302 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~ 302 (733)
+...+.+++.+.. .+++.++|.-.|.|..|..++++ +.++|+|+|.|+++++.++ + ..++++++++++.++
T Consensus 17 ~~i~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI-GDERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhC
Confidence 4556777787776 77889999999999999999986 3579999999999999984 5 556899999988765
No 130
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.83 E-value=0.014 Score=59.33 Aligned_cols=72 Identities=11% Similarity=0.238 Sum_probs=58.9
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccch
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTEL 302 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~ 302 (733)
.+...+.+++.+.. .+++.++|.-.|.|..|..++++. ++|+|+|.|+++++.++ ++. .++++++++++.++
T Consensus 15 d~~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 15 SKHNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp CHHHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred CHHHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC
Confidence 34556677777765 678899999999999999999884 78999999999999984 554 36899999887654
No 131
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.82 E-value=0.013 Score=60.00 Aligned_cols=94 Identities=12% Similarity=0.196 Sum_probs=67.4
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH------HHHHhc-ccC----CCcEEEEccC
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE------SVSLGN-KIT----DSRFSIIHNC 298 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~------a~~~a~-~l~----~~r~~~~~~~ 298 (733)
.++++.+.. +++..++|.-.|.|.++..++++.+++++++|+|.+++ +++.|+ ++. .+++++++.+
T Consensus 33 ~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 33 LAIAEAWQV---KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHTC---CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 345555555 67889999999999999999999877799999999997 888873 443 2589999987
Q ss_pred -ccchHHHHHhCCCCcccEEEEcCCCCccccCCC
Q psy2380 299 -FTELDIILKKYNIKKIDGILFDLGISSNQINNE 331 (733)
Q Consensus 299 -f~~~~~~l~~~~~~~~dgil~DLGvss~q~~~~ 331 (733)
+.... +. ..-+++|.|+....+ ++++++
T Consensus 110 ~~~~~~--~~-~~~~~fD~v~~~~~l--~~~~~~ 138 (275)
T 3bkx_A 110 NLSDDL--GP-IADQHFDRVVLAHSL--WYFASA 138 (275)
T ss_dssp CTTTCC--GG-GTTCCCSEEEEESCG--GGSSCH
T ss_pred hhhhcc--CC-CCCCCEEEEEEccch--hhCCCH
Confidence 43211 11 112479999976443 444443
No 132
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.82 E-value=0.034 Score=55.99 Aligned_cols=81 Identities=16% Similarity=0.131 Sum_probs=63.3
Q ss_pred HHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhC
Q psy2380 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 231 Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
.+.+.+.. .+++.++|.-.|.|..+..+++.. + .+++|+|.++++++.|+ +....+++++++++.++. .
T Consensus 35 ~l~~~~~~---~~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-----~ 104 (253)
T 3g5l_A 35 ELKKMLPD---FNQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA-----I 104 (253)
T ss_dssp HHHTTCCC---CTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC-----C
T ss_pred HHHHhhhc---cCCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC-----C
Confidence 34455554 578899999999999999999873 3 39999999999999995 554578999999987653 1
Q ss_pred CCCcccEEEEcC
Q psy2380 310 NIKKIDGILFDL 321 (733)
Q Consensus 310 ~~~~~dgil~DL 321 (733)
.-+++|.|+...
T Consensus 105 ~~~~fD~v~~~~ 116 (253)
T 3g5l_A 105 EPDAYNVVLSSL 116 (253)
T ss_dssp CTTCEEEEEEES
T ss_pred CCCCeEEEEEch
Confidence 125799999864
No 133
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=95.81 E-value=0.022 Score=55.95 Aligned_cols=80 Identities=9% Similarity=-0.041 Sum_probs=59.8
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---------------CCcEE
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---------------DSRFS 293 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---------------~~r~~ 293 (733)
.+.++.+.. .+++.++|.-+|.|.++..++++ +.+|+|+|.++++++.|+ +.. ..+++
T Consensus 12 ~~~~~~l~~---~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 12 QQYWSSLNV---VPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp HHHHHHHCC---CTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred HHHHHhccc---CCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 344444543 56789999999999999999987 358999999999999984 432 25788
Q ss_pred EEccCccchHHHHHhCCCCcccEEEE
Q psy2380 294 IIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 294 ~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
++++++.++...-. +++|.|+.
T Consensus 86 ~~~~d~~~l~~~~~----~~fD~v~~ 107 (203)
T 1pjz_A 86 IWCGDFFALTARDI----GHCAAFYD 107 (203)
T ss_dssp EEEECCSSSTHHHH----HSEEEEEE
T ss_pred EEECccccCCcccC----CCEEEEEE
Confidence 99998888753211 25888764
No 134
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.78 E-value=0.024 Score=58.41 Aligned_cols=79 Identities=11% Similarity=0.196 Sum_probs=62.6
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
++.+++.+.. +++..++|.-.|.|+.+..++++.+ .+++|+|.++++++.++ ++. .++++++++++.++.
T Consensus 53 ~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 127 (287)
T 1kpg_A 53 IDLALGKLGL---QPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD 127 (287)
T ss_dssp HHHHHTTTTC---CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC
T ss_pred HHHHHHHcCC---CCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC
Confidence 3445566655 6788999999999999999998763 49999999999999984 442 358999999886653
Q ss_pred HHHHhCCCCcccEEEEc
Q psy2380 304 IILKKYNIKKIDGILFD 320 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~D 320 (733)
+++|.|+..
T Consensus 128 --------~~fD~v~~~ 136 (287)
T 1kpg_A 128 --------EPVDRIVSI 136 (287)
T ss_dssp --------CCCSEEEEE
T ss_pred --------CCeeEEEEe
Confidence 468988865
No 135
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=95.74 E-value=0.032 Score=57.39 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=59.1
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++..++|...|.|..+..+++.. ++.+++|+|.++++++.|+ +.. -++++++++++.+. +. -+++|.|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~---~~---~~~fD~Iv 181 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA---LA---GQQFAMIV 181 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---GT---TCCEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---cc---cCCccEEE
Confidence 46799999999999999999887 6789999999999999984 432 24799999987653 21 14699999
Q ss_pred EcCCC
Q psy2380 319 FDLGI 323 (733)
Q Consensus 319 ~DLGv 323 (733)
.|.-|
T Consensus 182 ~npPy 186 (276)
T 2b3t_A 182 SNPPY 186 (276)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 87544
No 136
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.72 E-value=0.06 Score=52.47 Aligned_cols=81 Identities=15% Similarity=0.202 Sum_probs=62.8
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHh
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKK 308 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~ 308 (733)
...+++.+.. +.+++.++|.-.|.|..+..+++. +.+++|+|.++++++.+++...++++++++++.++ .
T Consensus 34 ~~~~~~~l~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---~-- 103 (218)
T 3ou2_A 34 APAALERLRA--GNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---T-- 103 (218)
T ss_dssp HHHHHHHHTT--TTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---C--
T ss_pred HHHHHHHHhc--CCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---C--
Confidence 3445555542 256789999999999999999988 46999999999999999653236899999998775 1
Q ss_pred CCCCcccEEEEc
Q psy2380 309 YNIKKIDGILFD 320 (733)
Q Consensus 309 ~~~~~~dgil~D 320 (733)
.-+++|.|+..
T Consensus 104 -~~~~~D~v~~~ 114 (218)
T 3ou2_A 104 -PDRQWDAVFFA 114 (218)
T ss_dssp -CSSCEEEEEEE
T ss_pred -CCCceeEEEEe
Confidence 12579999875
No 137
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.71 E-value=0.023 Score=59.53 Aligned_cols=80 Identities=11% Similarity=0.206 Sum_probs=64.0
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
++.+++.+.. +++..++|.-.|.|+.+..+++.. +.+++|+|.++++++.|+ ++. .++++++++++.+++
T Consensus 79 ~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 153 (318)
T 2fk8_A 79 VDLNLDKLDL---KPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA 153 (318)
T ss_dssp HHHHHTTSCC---CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC
T ss_pred HHHHHHhcCC---CCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC
Confidence 3455666655 678899999999999999999987 469999999999999984 442 357999999887753
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
+++|.|+...
T Consensus 154 --------~~fD~v~~~~ 163 (318)
T 2fk8_A 154 --------EPVDRIVSIE 163 (318)
T ss_dssp --------CCCSEEEEES
T ss_pred --------CCcCEEEEeC
Confidence 4699998763
No 138
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=95.68 E-value=0.024 Score=57.15 Aligned_cols=81 Identities=16% Similarity=0.067 Sum_probs=64.2
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccch
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTEL 302 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~ 302 (733)
....+++.+.. +++..++|.-.|.|..+..+++.. +++++|+|.++++++.|+ +.. .++++++++++.++
T Consensus 24 ~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 24 KYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred HHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 44556666655 678899999999999999999987 468999999999999984 432 35899999988875
Q ss_pred HHHHHhCCCCcccEEEE
Q psy2380 303 DIILKKYNIKKIDGILF 319 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~ 319 (733)
.. -+++|.|+.
T Consensus 99 ~~------~~~fD~V~~ 109 (256)
T 1nkv_A 99 VA------NEKCDVAAC 109 (256)
T ss_dssp CC------SSCEEEEEE
T ss_pred Cc------CCCCCEEEE
Confidence 42 146898887
No 139
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.67 E-value=0.028 Score=57.37 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=52.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
+++..++|.-.|.|..+.++++. ++ +++|+|.|+++++.|+ +.. +-.+++++++..+ .+.. .++|.|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~---~~~~---~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA---ALPF---GPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH---HGGG---CCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh---cCcC---CCCCEEE
Confidence 45789999999999999998764 34 9999999999999984 443 2127787776544 2322 3689998
Q ss_pred EcC
Q psy2380 319 FDL 321 (733)
Q Consensus 319 ~DL 321 (733)
.|.
T Consensus 190 ~n~ 192 (254)
T 2nxc_A 190 ANL 192 (254)
T ss_dssp EEC
T ss_pred ECC
Confidence 863
No 140
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.67 E-value=0.065 Score=55.38 Aligned_cols=89 Identities=15% Similarity=0.261 Sum_probs=61.6
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCC---ChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQ---GGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~---Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~ 303 (733)
+.++++.+.. ..+...++|.=.|. |.-+ ..+.+..|+++|+++|.||++++.|+ ++. .++++++++++.+..
T Consensus 65 ~~~~~~~l~~--~~~~~~vLDlGcG~pt~G~~~-~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 65 LVRGVRFLAG--EAGISQFLDLGSGLPTVQNTH-EVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHHHT--TTCCCEEEEETCCSCCSSCHH-HHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHH
T ss_pred HHHHHHHHhh--ccCCCEEEEECCCCCCCChHH-HHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCch
Confidence 3445555552 02347999999999 7554 44444457899999999999999995 554 468999999998865
Q ss_pred HHHH------hCCCCcccEEEEc
Q psy2380 304 IILK------KYNIKKIDGILFD 320 (733)
Q Consensus 304 ~~l~------~~~~~~~dgil~D 320 (733)
..+. .+..+++|.|++.
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~ 164 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLV 164 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEET
T ss_pred hhhccchhhccCCCCCCEEEEEe
Confidence 4432 2333467777654
No 141
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.65 E-value=0.031 Score=58.56 Aligned_cols=82 Identities=13% Similarity=0.216 Sum_probs=63.6
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
+.+++.+.. ++++..++|.-.|.|..+..++++. +++|+|+|.++++++.|+ ++. .++++++++++.++.
T Consensus 106 ~~l~~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 180 (312)
T 3vc1_A 106 EFLMDHLGQ--AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP- 180 (312)
T ss_dssp HHHHTTSCC--CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-
T ss_pred HHHHHHhcc--CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-
Confidence 445666651 2678899999999999999999986 579999999999999984 432 358999999987753
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
..-+++|.|+..
T Consensus 181 ----~~~~~fD~V~~~ 192 (312)
T 3vc1_A 181 ----FDKGAVTASWNN 192 (312)
T ss_dssp ----CCTTCEEEEEEE
T ss_pred ----CCCCCEeEEEEC
Confidence 112479999843
No 142
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.65 E-value=0.01 Score=61.57 Aligned_cols=88 Identities=11% Similarity=0.044 Sum_probs=67.2
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchH
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELD 303 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~ 303 (733)
.+...+.+++.+.. +++ .++|.-.|.|..|..++++. ++|+|+|.|+++++.++ ++.+++++++++++.+++
T Consensus 32 d~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 32 SEAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYP 104 (271)
T ss_dssp CHHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSC
T ss_pred CHHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCC
Confidence 34556777777776 677 99999999999999999873 68999999999999984 665578999999987754
Q ss_pred HHHHhCCCCcccEEEEcCCC
Q psy2380 304 IILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DLGv 323 (733)
- ++. ...|.|+.||=|
T Consensus 105 ~--~~~--~~~~~iv~NlPy 120 (271)
T 3fut_A 105 W--EEV--PQGSLLVANLPY 120 (271)
T ss_dssp G--GGS--CTTEEEEEEECS
T ss_pred h--hhc--cCccEEEecCcc
Confidence 1 211 135666666644
No 143
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.60 E-value=0.019 Score=57.08 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=68.1
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCC-----CcEEEEEeCCHHHHHHhc-ccC--------CC
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGK-----KGRLIAIDKDTESVSLGN-KIT--------DS 290 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~-----~~~l~~~D~D~~a~~~a~-~l~--------~~ 290 (733)
.|.+...+++.+.. .++++..++|.-.|.|..+..+++..+. +++|+++|.++++++.|+ ++. .+
T Consensus 67 ~p~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 67 APHMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp CHHHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC
Confidence 45556666776631 1167889999999999999999987643 479999999999999984 442 25
Q ss_pred cEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 291 RFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 291 r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
++++++++..+- +... .++|.|+.+.+.
T Consensus 146 ~v~~~~~d~~~~---~~~~--~~fD~I~~~~~~ 173 (227)
T 1r18_A 146 QLLIVEGDGRKG---YPPN--APYNAIHVGAAA 173 (227)
T ss_dssp SEEEEESCGGGC---CGGG--CSEEEEEECSCB
T ss_pred ceEEEECCcccC---CCcC--CCccEEEECCch
Confidence 799998876541 1211 369999887664
No 144
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=95.57 E-value=0.019 Score=63.46 Aligned_cols=86 Identities=15% Similarity=0.305 Sum_probs=62.5
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchH
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELD 303 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~ 303 (733)
+.+.+++.+.. .++..++|...|.|.-|..++++ .++|+|+|.++++++.|+ +.. -+++++++++..+..
T Consensus 274 l~~~~~~~l~~---~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 274 MVARALEWLDV---QPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHTC---CTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC
T ss_pred HHHHHHHhhcC---CCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh
Confidence 34555566655 56789999999999999999876 579999999999999994 442 248999999876621
Q ss_pred HHHHhCCCCcccEEEEc
Q psy2380 304 IILKKYNIKKIDGILFD 320 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~D 320 (733)
.-+. ..-.++|.|++|
T Consensus 348 ~~~~-~~~~~fD~Vv~d 363 (433)
T 1uwv_A 348 TKQP-WAKNGFDKVLLD 363 (433)
T ss_dssp SSSG-GGTTCCSEEEEC
T ss_pred hhhh-hhcCCCCEEEEC
Confidence 1000 011368999974
No 145
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.49 E-value=0.052 Score=53.97 Aligned_cols=80 Identities=13% Similarity=0.028 Sum_probs=61.0
Q ss_pred HHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhC
Q psy2380 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 231 Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
.+.+.+.. .++..++|.-.|.|..+..++++ + ..+++|+|.++++++.++ +....+++++++++.++. .
T Consensus 34 ~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-----~ 103 (243)
T 3bkw_A 34 ALRAMLPE---VGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH-----L 103 (243)
T ss_dssp HHHHHSCC---CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-----C
T ss_pred HHHHhccc---cCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-----C
Confidence 34445544 56789999999999999999986 2 249999999999999995 554567999998877653 1
Q ss_pred CCCcccEEEEc
Q psy2380 310 NIKKIDGILFD 320 (733)
Q Consensus 310 ~~~~~dgil~D 320 (733)
.-+++|.|+..
T Consensus 104 ~~~~fD~v~~~ 114 (243)
T 3bkw_A 104 PQDSFDLAYSS 114 (243)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCceEEEEe
Confidence 12468988873
No 146
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.43 E-value=0.018 Score=58.05 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=60.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
.+|+.++|.=+|.|..+..|++.. + .+++|+|.+|++++.|+ +.. ..+++++++...++ +....-.++|+|.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~---~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---APTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-E-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH---GGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-C-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh---cccccccCCceEE
Confidence 478999999999999999998764 3 58999999999999995 333 45778887765443 3334345799999
Q ss_pred EcCCCCcc
Q psy2380 319 FDLGISSN 326 (733)
Q Consensus 319 ~DLGvss~ 326 (733)
||-=+++.
T Consensus 134 ~D~~~~~~ 141 (236)
T 3orh_A 134 YDTYPLSE 141 (236)
T ss_dssp ECCCCCBG
T ss_pred Eeeeeccc
Confidence 98544443
No 147
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=95.40 E-value=0.047 Score=55.61 Aligned_cols=82 Identities=18% Similarity=0.239 Sum_probs=63.9
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
.+.+++.+.. +++..++|.-.|.|..+..++++. +++++|+|.++++++.++ +.. .+|++++++++.++.
T Consensus 50 ~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 50 TDEMIALLDV---RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp HHHHHHHSCC---CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC
Confidence 3455566655 678899999999999999999886 579999999999999984 432 458999999887753
Q ss_pred HHHHhCCCCcccEEEEc
Q psy2380 304 IILKKYNIKKIDGILFD 320 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~D 320 (733)
..-+++|.|+..
T Consensus 125 -----~~~~~fD~v~~~ 136 (273)
T 3bus_A 125 -----FEDASFDAVWAL 136 (273)
T ss_dssp -----SCTTCEEEEEEE
T ss_pred -----CCCCCccEEEEe
Confidence 112478988864
No 148
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.33 E-value=0.033 Score=55.77 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=65.5
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCcc
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~ 300 (733)
.|.+...+++.+.. +++..++|.-.|.|..+..+++..+ ++++++|.++++++.|+ ++. -++++++.+++.
T Consensus 76 ~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 150 (235)
T 1jg1_A 76 APHMVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS 150 (235)
T ss_dssp CHHHHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred cHHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc
Confidence 34455666666665 6788999999999999999999874 79999999999999984 443 246888888762
Q ss_pred chHHHHHhCCCCcccEEEEcCCC
Q psy2380 301 ELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 301 ~~~~~l~~~~~~~~dgil~DLGv 323 (733)
. -+... .++|.|+.+.+.
T Consensus 151 ~---~~~~~--~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 151 K---GFPPK--APYDVIIVTAGA 168 (235)
T ss_dssp G---CCGGG--CCEEEEEECSBB
T ss_pred c---CCCCC--CCccEEEECCcH
Confidence 1 11211 258999987543
No 149
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.29 E-value=0.058 Score=53.94 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=61.4
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
..+++.+.. +++..++|.-.|.|..+..+++. .++++++|.++++++.|+ ++. +++++++++++.+..
T Consensus 81 ~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 153 (248)
T 2yvl_A 81 FYIALKLNL---NKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE- 153 (248)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-
T ss_pred HHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-
Confidence 344444554 67889999999999999999988 579999999999999984 432 368999998876531
Q ss_pred HHHhCCCCcccEEEEcC
Q psy2380 305 ILKKYNIKKIDGILFDL 321 (733)
Q Consensus 305 ~l~~~~~~~~dgil~DL 321 (733)
+. -.++|.|+.|.
T Consensus 154 -~~---~~~~D~v~~~~ 166 (248)
T 2yvl_A 154 -VP---EGIFHAAFVDV 166 (248)
T ss_dssp -CC---TTCBSEEEECS
T ss_pred -cC---CCcccEEEECC
Confidence 01 14689999754
No 150
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.27 E-value=0.026 Score=58.36 Aligned_cols=87 Identities=13% Similarity=0.077 Sum_probs=66.3
Q ss_pred hhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchH
Q psy2380 227 LFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELD 303 (733)
Q Consensus 227 vll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~ 303 (733)
..++.+++.+.. +.+++.++|.-.|.|..+..+++.+++.++++|+|.++.+++.|+ +.. +.++++++++..++.
T Consensus 8 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 8 DYVSFLVNTVWK--ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHHHTTSC--CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC
T ss_pred HHHHHHHHHHhc--cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC
Confidence 334444544432 256789999999999999999998855689999999999999984 442 348999999888753
Q ss_pred HHHHhCCCCcccEEEEcC
Q psy2380 304 IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DL 321 (733)
. + +++|.|+...
T Consensus 86 ~--~----~~fD~v~~~~ 97 (284)
T 3gu3_A 86 L--N----DKYDIAICHA 97 (284)
T ss_dssp C--S----SCEEEEEEES
T ss_pred c--C----CCeeEEEECC
Confidence 2 1 4799998864
No 151
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=95.26 E-value=0.027 Score=56.48 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=58.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
++++.++|.-.|.|..+..+++.. + +|+|+|.++++++.++ ++...+++++++++.++........-..+|.|+.+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~-~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFF-P--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHS-S--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhC-C--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 467889999999999999999885 3 7999999999999994 55556899999999887543211000137888776
No 152
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.26 E-value=0.053 Score=56.07 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=58.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.++..++|.-.|.|..+..+++.. +++++|+|.++++++.|+ ++. .++++++++++.++. ..-+++|.
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~ 153 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----CEDNSYDF 153 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----SCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-----CCCCCEeE
Confidence 568899999999999999999987 469999999999999984 442 368999999988753 11246898
Q ss_pred EEEc
Q psy2380 317 ILFD 320 (733)
Q Consensus 317 il~D 320 (733)
|+..
T Consensus 154 v~~~ 157 (297)
T 2o57_A 154 IWSQ 157 (297)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8865
No 153
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.23 E-value=0.051 Score=54.58 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=59.7
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIIL 306 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l 306 (733)
.+++..... ++++.++|.-.|.|.++..+++. +.+++|+|.++++++.|+ +.. +.+++++++++.++..
T Consensus 31 ~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-- 102 (252)
T 1wzn_A 31 EEIFKEDAK---REVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-- 102 (252)
T ss_dssp HHHHHHTCS---SCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC--
T ss_pred HHHHHHhcc---cCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc--
Confidence 444444443 46789999999999999999876 468999999999999984 443 3478999998876531
Q ss_pred HhCCCCcccEEEEc
Q psy2380 307 KKYNIKKIDGILFD 320 (733)
Q Consensus 307 ~~~~~~~~dgil~D 320 (733)
. +++|.|+..
T Consensus 103 ---~-~~fD~v~~~ 112 (252)
T 1wzn_A 103 ---K-NEFDAVTMF 112 (252)
T ss_dssp ---C-SCEEEEEEC
T ss_pred ---C-CCccEEEEc
Confidence 1 468988863
No 154
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.21 E-value=0.064 Score=54.53 Aligned_cols=83 Identities=20% Similarity=0.236 Sum_probs=64.5
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHH
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILK 307 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~ 307 (733)
+.+.+++.+.. .+++.++|.-.|.|..+..+++ ++++|+|+|.++++++.+++. .+++++++++.++.
T Consensus 22 ~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~--~~~~~~~~d~~~~~---- 89 (261)
T 3ege_A 22 IVNAIINLLNL---PKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVH--PQVEWFTGYAENLA---- 89 (261)
T ss_dssp HHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCC--TTEEEECCCTTSCC----
T ss_pred HHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhc--cCCEEEECchhhCC----
Confidence 44556666655 6788999999999999999986 568999999999999988532 28999999887753
Q ss_pred hCCCCcccEEEEcCCC
Q psy2380 308 KYNIKKIDGILFDLGI 323 (733)
Q Consensus 308 ~~~~~~~dgil~DLGv 323 (733)
..-+++|.|+....+
T Consensus 90 -~~~~~fD~v~~~~~l 104 (261)
T 3ege_A 90 -LPDKSVDGVISILAI 104 (261)
T ss_dssp -SCTTCBSEEEEESCG
T ss_pred -CCCCCEeEEEEcchH
Confidence 112479999987554
No 155
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=95.19 E-value=0.045 Score=53.81 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=55.6
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHH----hc-ccC---CCcEEEEccCcc
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSL----GN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~----a~-~l~---~~r~~~~~~~f~ 300 (733)
..+.++.+.. ++++.++|.-.|.|..+..++++. |+++|+|+|.++++++. |+ +.. -+++++++++..
T Consensus 16 ~~~~~~~l~~---~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 16 SDAEFEQLRS---QYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAE 91 (218)
T ss_dssp CHHHHHHHHT---TSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCST
T ss_pred CHHHHHHhhc---cCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchh
Confidence 3556666666 778899999999999999999985 78999999999997774 32 221 247899888887
Q ss_pred chH
Q psy2380 301 ELD 303 (733)
Q Consensus 301 ~~~ 303 (733)
++.
T Consensus 92 ~l~ 94 (218)
T 3mq2_A 92 RLP 94 (218)
T ss_dssp TCC
T ss_pred hCC
Confidence 653
No 156
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.18 E-value=0.026 Score=61.52 Aligned_cols=75 Identities=20% Similarity=0.226 Sum_probs=57.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
++..++|+..|.|+.|..+++. ...+|+|+|.++++++.|+ ++. ++++++++++..+....+...+ .++|.|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~-~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKG-EKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTT-CCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhC-CCCCEE
Confidence 5789999999999999999976 3469999999999999984 442 2389999998766543332212 479999
Q ss_pred EEc
Q psy2380 318 LFD 320 (733)
Q Consensus 318 l~D 320 (733)
++|
T Consensus 294 i~d 296 (396)
T 2as0_A 294 VLD 296 (396)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 157
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.16 E-value=0.051 Score=58.93 Aligned_cols=79 Identities=13% Similarity=0.201 Sum_probs=62.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-----------CCcEEEEccCccchHHHHH-h
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-----------DSRFSIIHNCFTELDIILK-K 308 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-----------~~r~~~~~~~f~~~~~~l~-~ 308 (733)
.++..++|.-.|.|..+..+++..+++++|+|+|.++++++.|+ +++ .+++++++++..++..... .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 56889999999999999999999878899999999999999984 431 2689999999888643210 1
Q ss_pred CCCCcccEEEEc
Q psy2380 309 YNIKKIDGILFD 320 (733)
Q Consensus 309 ~~~~~~dgil~D 320 (733)
..-+++|.|+.+
T Consensus 162 ~~~~~fD~V~~~ 173 (383)
T 4fsd_A 162 VPDSSVDIVISN 173 (383)
T ss_dssp CCTTCEEEEEEE
T ss_pred CCCCCEEEEEEc
Confidence 112479999987
No 158
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.13 E-value=0.037 Score=53.81 Aligned_cols=86 Identities=9% Similarity=0.062 Sum_probs=60.9
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccch
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTEL 302 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~ 302 (733)
...+.+.++.+.. ..+++.++|+-.|.|..+..++.. ++.+++|+|.++++++.++ +.. ..++++++.+..++
T Consensus 8 ~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 83 (209)
T 2p8j_A 8 QPQLYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL 83 (209)
T ss_dssp CTHHHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC
T ss_pred hhhHHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC
Confidence 3344555555543 246789999999999887777765 4579999999999999984 432 45788888887764
Q ss_pred HHHHHhCCCCcccEEEEc
Q psy2380 303 DIILKKYNIKKIDGILFD 320 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~D 320 (733)
. ..-+++|.|+..
T Consensus 84 ~-----~~~~~fD~v~~~ 96 (209)
T 2p8j_A 84 P-----FKDESMSFVYSY 96 (209)
T ss_dssp C-----SCTTCEEEEEEC
T ss_pred C-----CCCCceeEEEEc
Confidence 3 112468888764
No 159
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.13 E-value=0.053 Score=59.10 Aligned_cols=76 Identities=16% Similarity=0.261 Sum_probs=58.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C--C-cEEEEccCccchHHHHHhCCCCcccE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D--S-RFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~--~-r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
++..++|+..|.|+-|..+++. + ..+|+|+|.++++++.|+ ++. + + ++++++++..+....+...+ .++|.
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~-~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRG-EKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTT-CCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcC-CCCCE
Confidence 4679999999999999999976 2 469999999999999984 432 2 2 79999998766533332222 47999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|++|-
T Consensus 297 Ii~dp 301 (396)
T 3c0k_A 297 IVMDP 301 (396)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99985
No 160
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.12 E-value=0.071 Score=58.90 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=62.1
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-------c-ccC--C---CcE
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-------N-KIT--D---SRF 292 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-------~-~l~--~---~r~ 292 (733)
|-++.++++.+.. +++..++|...|.|..+..+++.. +..+|+|+|+++++++.| + ++. + +++
T Consensus 228 p~~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 228 PNFLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 3445566666665 678899999999999999999987 456999999999998887 3 221 2 578
Q ss_pred EEEcc-CccchHHHHHhCCCCcccEEEE
Q psy2380 293 SIIHN-CFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 293 ~~~~~-~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++++ .+.+-..+-... .++|.|+.
T Consensus 304 ~~i~gD~~~~~~~~~~~~--~~FDvIvv 329 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELI--PQCDVILV 329 (433)
T ss_dssp EEEESSCSTTCHHHHHHG--GGCSEEEE
T ss_pred EEEEcCcccccccccccc--CCCCEEEE
Confidence 88875 554311110111 36898886
No 161
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.11 E-value=0.025 Score=56.65 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=57.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++++.++|.-.|.|..+..+.+. ...+++|+|.++++++.|+ +.. +.++.+++++..++. ....-+++|.|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA---PTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG---GGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh---cccCCCceEEEE
Confidence 46789999999999999999654 2358999999999999994 443 467999998876642 222225799999
Q ss_pred Ec
Q psy2380 319 FD 320 (733)
Q Consensus 319 ~D 320 (733)
.|
T Consensus 134 ~d 135 (236)
T 1zx0_A 134 YD 135 (236)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 162
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.09 E-value=0.014 Score=61.03 Aligned_cols=73 Identities=14% Similarity=0.067 Sum_probs=59.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
+++..++|.-+|.|.++..++....++++++|+|.++++++.|+ ++. .+|++++++++.++. .. +++|.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-----TR-EGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-----CC-SCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-----cc-CCeEE
Confidence 56889999999999999999744457899999999999999994 443 357999999988753 12 57999
Q ss_pred EEEc
Q psy2380 317 ILFD 320 (733)
Q Consensus 317 il~D 320 (733)
|+.+
T Consensus 191 v~~~ 194 (305)
T 3ocj_A 191 LTSN 194 (305)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8864
No 163
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=95.08 E-value=0.059 Score=53.62 Aligned_cols=70 Identities=14% Similarity=0.268 Sum_probs=57.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
.+++.++|.-.|.|..+..+++. +.+++|+|.++++++.++ +....+++++++++.++. ..-+++|.|+.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP-----FENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS-----SCTTCEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC-----CCCCCccEEEE
Confidence 35789999999999999999987 468999999999999995 444578999999888763 11247999886
No 164
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.07 E-value=0.052 Score=58.90 Aligned_cols=82 Identities=13% Similarity=0.257 Sum_probs=62.7
Q ss_pred HHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----C--CcEEEEccCccchHH
Q psy2380 232 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----D--SRFSIIHNCFTELDI 304 (733)
Q Consensus 232 vl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~--~r~~~~~~~f~~~~~ 304 (733)
+++.+.. .+++.++|.-.|.|..+..+++.. |..+|+|+|.++.+++.|+ ++. + .+++++.++..+.
T Consensus 214 ll~~l~~---~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-- 287 (375)
T 4dcm_A 214 FMQHLPE---NLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-- 287 (375)
T ss_dssp HHHTCCC---SCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT--
T ss_pred HHHhCcc---cCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc--
Confidence 3455555 567899999999999999999985 7899999999999999984 442 1 2688888887551
Q ss_pred HHHhCCCCcccEEEEcCCC
Q psy2380 305 ILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 305 ~l~~~~~~~~dgil~DLGv 323 (733)
+ .-+++|.|+.|.-+
T Consensus 288 -~---~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 288 -V---EPFRFNAVLCNPPF 302 (375)
T ss_dssp -C---CTTCEEEEEECCCC
T ss_pred -C---CCCCeeEEEECCCc
Confidence 1 12479999987543
No 165
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.04 E-value=0.033 Score=60.81 Aligned_cols=80 Identities=15% Similarity=0.120 Sum_probs=62.2
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhC
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
+.+++.+.+ .+++.++|...|.|+-+.+++++.++..+++|+|+|+++++.| ++++++++++.+..
T Consensus 29 ~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----~~~~~~~~D~~~~~------ 94 (421)
T 2ih2_A 29 DFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----PWAEGILADFLLWE------ 94 (421)
T ss_dssp HHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----TTEEEEESCGGGCC------
T ss_pred HHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----CCCcEEeCChhhcC------
Confidence 444455544 4567999999999999999999876678999999999999877 57889998876542
Q ss_pred CCCcccEEEEcCCC
Q psy2380 310 NIKKIDGILFDLGI 323 (733)
Q Consensus 310 ~~~~~dgil~DLGv 323 (733)
.-+++|.|+.|-=+
T Consensus 95 ~~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 95 PGEAFDLILGNPPY 108 (421)
T ss_dssp CSSCEEEEEECCCC
T ss_pred ccCCCCEEEECcCc
Confidence 11479999988433
No 166
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.04 E-value=0.06 Score=57.37 Aligned_cols=76 Identities=11% Similarity=-0.020 Sum_probs=57.2
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CC-cEEEEccCccchHHHHHhCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DS-RFSIIHNCFTELDIILKKYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~-r~~~~~~~f~~~~~~l~~~~~~~~d 315 (733)
.++..++|+-.|.|+.|..+++. +.+|+|+|.++++++.|+ +++ ++ ++++++++..++...+...+ .++|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~-~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRG-STYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHT-CCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcC-CCce
Confidence 35679999999999999999975 349999999999999984 432 33 59999988665433221111 4799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|++|.
T Consensus 228 ~Ii~dP 233 (332)
T 2igt_A 228 IILTDP 233 (332)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999984
No 167
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=95.03 E-value=0.056 Score=58.38 Aligned_cols=85 Identities=20% Similarity=0.260 Sum_probs=59.8
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C-CcEEEEccCccchHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D-SRFSIIHNCFTELDI 304 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~-~r~~~~~~~f~~~~~ 304 (733)
.+.+++.+.. .++.++|+..|.|+-|..+.+. ..+|+|+|.+++|++.|+ +.+ + +++++++++..++..
T Consensus 203 ~~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 203 LEWALDVTKG----SKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHTTT----CCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred HHHHHHHhhc----CCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 3444555543 2568999999999999988764 358999999999999984 442 2 579999988766533
Q ss_pred HHHhCC-------C----CcccEEEEc
Q psy2380 305 ILKKYN-------I----KKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~-------~----~~~dgil~D 320 (733)
.+...+ . .++|.|++|
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~d 302 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVD 302 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEEC
T ss_pred HHhhccccccccccccccCCCCEEEEC
Confidence 332111 0 268999875
No 168
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.02 E-value=0.058 Score=55.92 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=57.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc-------------CCCcEEEEccCccchHHHHHh
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI-------------TDSRFSIIHNCFTELDIILKK 308 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l-------------~~~r~~~~~~~f~~~~~~l~~ 308 (733)
++..++|.-.|.|+-+..+++. +..+++++|+|+++++.|+ ++ .++|+++++++.. ++++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~---~~l~~ 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF---EFIKN 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH---HHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchH---HHhcc
Confidence 4578999999999999999987 5689999999999999984 44 3468999887643 34443
Q ss_pred CCCCcccEEEEcC
Q psy2380 309 YNIKKIDGILFDL 321 (733)
Q Consensus 309 ~~~~~~dgil~DL 321 (733)
-+++|.|+.|.
T Consensus 150 --~~~fD~Ii~d~ 160 (281)
T 1mjf_A 150 --NRGFDVIIADS 160 (281)
T ss_dssp --CCCEEEEEEEC
T ss_pred --cCCeeEEEECC
Confidence 25799999874
No 169
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=94.92 E-value=0.027 Score=57.77 Aligned_cols=94 Identities=9% Similarity=0.052 Sum_probs=67.9
Q ss_pred hhhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccc
Q psy2380 224 MGFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTE 301 (733)
Q Consensus 224 l~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~ 301 (733)
..|...+.+++.+.. ++++.++|.-.|.|..|. |++. +..+|+|+|+|+++++.++ ++. .++++++++++.+
T Consensus 5 ~d~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~--l~~~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 5 NDQFVIDSIVSAINP---QKGQAMVEIGPGLAALTE--PVGE-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp CCHHHHHHHHHHHCC---CTTCCEEEECCTTTTTHH--HHHT-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred CCHHHHHHHHHhcCC---CCcCEEEEECCCCcHHHH--hhhC-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 345667778888876 778899999999999999 5653 3344999999999999984 554 2589999999887
Q ss_pred hH--HHHHhCCCCcccEEEEcCCCCc
Q psy2380 302 LD--IILKKYNIKKIDGILFDLGISS 325 (733)
Q Consensus 302 ~~--~~l~~~~~~~~dgil~DLGvss 325 (733)
++ +..... +..|.|+.++-|..
T Consensus 79 ~~~~~~~~~~--~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 79 FNFGELAEKM--GQPLRVFGNLPYNI 102 (252)
T ss_dssp CCHHHHHHHH--TSCEEEEEECCTTT
T ss_pred CCHHHhhccc--CCceEEEECCCCCc
Confidence 53 222100 13467777776543
No 170
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=94.90 E-value=0.06 Score=55.73 Aligned_cols=74 Identities=18% Similarity=0.155 Sum_probs=58.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc-------CCCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI-------TDSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l-------~~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+.++++.. +..++.++|+|+++++.|+ ++ .++|+++++++..+ +++... +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~---~l~~~~-~~f 149 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM---HIAKSE-NQY 149 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH---HHHTCC-SCE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH---HHhhCC-CCe
Confidence 35789999999999999999863 5689999999999999984 44 24799999987653 444322 579
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 150 D~Ii~d~ 156 (275)
T 1iy9_A 150 DVIMVDS 156 (275)
T ss_dssp EEEEESC
T ss_pred eEEEECC
Confidence 9999974
No 171
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=94.85 E-value=0.082 Score=54.88 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=59.0
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+..+++. .+..++.++|+|+++++.|+ ++. ++|+++++++..+ .++.. -+++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~---~l~~~-~~~f 152 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK---FLENV-TNTY 152 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH---HHHHC-CSCE
T ss_pred CCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH---HHHhC-CCCc
Confidence 4578999999999999999976 46789999999999999984 443 4689999886544 34433 2579
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 153 D~Ii~d~ 159 (283)
T 2i7c_A 153 DVIIVDS 159 (283)
T ss_dssp EEEEEEC
T ss_pred eEEEEcC
Confidence 9999984
No 172
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=94.85 E-value=0.076 Score=55.76 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc-------CCCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI-------TDSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l-------~~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+..+++. .+..+++++|+|+++++.|+ ++ .++|++++.++..+ ++....-+++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~f 170 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA---FVRQTPDNTY 170 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH---HHHSSCTTCE
T ss_pred CCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH---HHHhccCCce
Confidence 4578999999999999999986 36789999999999999984 44 24789999887654 3432122579
Q ss_pred cEEEEc
Q psy2380 315 DGILFD 320 (733)
Q Consensus 315 dgil~D 320 (733)
|.|+.|
T Consensus 171 DvIi~d 176 (304)
T 3bwc_A 171 DVVIID 176 (304)
T ss_dssp EEEEEE
T ss_pred eEEEEC
Confidence 999986
No 173
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=94.75 E-value=0.047 Score=56.14 Aligned_cols=80 Identities=20% Similarity=0.255 Sum_probs=62.3
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
.+++..+.+ +++.++|.-.|.|..+..+++. +.+++|+|.++++++.|+ ++. .++++++++++.++..
T Consensus 59 ~~~l~~~~~----~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 131 (285)
T 4htf_A 59 DRVLAEMGP----QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS 131 (285)
T ss_dssp HHHHHHTCS----SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG
T ss_pred HHHHHhcCC----CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh
Confidence 344555544 3679999999999999999987 569999999999999984 443 2689999999988753
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
.. -+++|.|+..
T Consensus 132 ~~----~~~fD~v~~~ 143 (285)
T 4htf_A 132 HL----ETPVDLILFH 143 (285)
T ss_dssp GC----SSCEEEEEEE
T ss_pred hc----CCCceEEEEC
Confidence 22 2579999976
No 174
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.73 E-value=0.083 Score=53.86 Aligned_cols=74 Identities=14% Similarity=0.201 Sum_probs=59.8
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
.++..++|.-.|.|..+..+++.. |+++++|+|.++++++.++ ++. .++++++..+..++. ..-+++|.|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-----FEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-----SCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-----CCCCCeeEE
Confidence 568899999999999999999985 7799999999999999984 442 257999998877653 112579999
Q ss_pred EEcC
Q psy2380 318 LFDL 321 (733)
Q Consensus 318 l~DL 321 (733)
+...
T Consensus 110 ~~~~ 113 (276)
T 3mgg_A 110 FVCF 113 (276)
T ss_dssp EEES
T ss_pred EEec
Confidence 9765
No 175
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.71 E-value=0.072 Score=52.11 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=58.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
.+++.++|.-.|.|..+..+++.. .+++|+|.++++++.|+ ++. .++++++++++.++. . -+++|.|+.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---~---~~~fD~v~~ 120 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS---T---AELFDLIVV 120 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC---C---SCCEEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC---C---CCCccEEEE
Confidence 567899999999999999998873 58999999999999994 554 358999999988865 1 247999987
Q ss_pred c
Q psy2380 320 D 320 (733)
Q Consensus 320 D 320 (733)
.
T Consensus 121 ~ 121 (216)
T 3ofk_A 121 A 121 (216)
T ss_dssp E
T ss_pred c
Confidence 5
No 176
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=94.71 E-value=0.087 Score=56.21 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=59.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+..+++.. +..+|+++|+|+++++.|+ ++. ++|+++++++..+ +++...-+++
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~---~l~~~~~~~f 195 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA---FLKNAAEGSY 195 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH---HHHTSCTTCE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH---HHHhccCCCc
Confidence 45789999999999999999874 6789999999999999984 442 4689999887543 4443322479
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 196 DlIi~d~ 202 (334)
T 1xj5_A 196 DAVIVDS 202 (334)
T ss_dssp EEEEECC
T ss_pred cEEEECC
Confidence 9999875
No 177
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=94.70 E-value=0.043 Score=53.77 Aligned_cols=85 Identities=14% Similarity=0.056 Sum_probs=61.0
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhC
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
.++++.+.. .++..++|.-.|.|..+..+++. +.+++|+|.++++++.+++. .+..+.+.++.++..... .
T Consensus 42 ~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~-~ 112 (227)
T 3e8s_A 42 QAILLAILG---RQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA--GAGEVHLASYAQLAEAKV-P 112 (227)
T ss_dssp HHHHHHHHH---TCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT--CSSCEEECCHHHHHTTCS-C
T ss_pred HHHHHHhhc---CCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh--cccccchhhHHhhccccc-c
Confidence 455566655 56789999999999999999977 46899999999999999543 456677777665422111 1
Q ss_pred CCCcccEEEEcCCC
Q psy2380 310 NIKKIDGILFDLGI 323 (733)
Q Consensus 310 ~~~~~dgil~DLGv 323 (733)
.-.++|.|+....+
T Consensus 113 ~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 113 VGKDYDLICANFAL 126 (227)
T ss_dssp CCCCEEEEEEESCC
T ss_pred cCCCccEEEECchh
Confidence 11359999886443
No 178
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.68 E-value=0.069 Score=56.53 Aligned_cols=73 Identities=14% Similarity=0.063 Sum_probs=59.0
Q ss_pred CEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 245 ~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
..++|.=.|.|+-+..++++. |+.++.++|+|+++++.|+ ++. ++|++++++...+ ++++..-+++|.|+.|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~---~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARM---VAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHH---HHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHH---HHhhccCCCCCEEEEC
Confidence 389999999999999999986 6779999999999999994 553 4689999876543 4554333579999998
Q ss_pred C
Q psy2380 321 L 321 (733)
Q Consensus 321 L 321 (733)
+
T Consensus 167 ~ 167 (317)
T 3gjy_A 167 V 167 (317)
T ss_dssp C
T ss_pred C
Confidence 3
No 179
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=94.68 E-value=0.044 Score=59.49 Aligned_cols=74 Identities=15% Similarity=0.168 Sum_probs=56.8
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
++..++|+..|.|+.|..+++. ..+|+|+|.++++++.|+ +++ -+++++++++..+....+...+ .++|.|+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~-~~fD~Ii 284 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEG-ERFDLVV 284 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcC-CCeeEEE
Confidence 3578999999999999999987 468999999999999984 442 1348999988766543332222 4799999
Q ss_pred Ec
Q psy2380 319 FD 320 (733)
Q Consensus 319 ~D 320 (733)
+|
T Consensus 285 ~d 286 (382)
T 1wxx_A 285 LD 286 (382)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 180
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=94.65 E-value=0.091 Score=52.64 Aligned_cols=80 Identities=13% Similarity=0.049 Sum_probs=61.5
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILK 307 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~ 307 (733)
.++++.+.. .++..++|.-.|.|..+..+++.. ..+++|+|.++++++.++ ++. .++++++++++.++.
T Consensus 83 ~~~l~~l~~---~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 153 (254)
T 1xtp_A 83 RNFIASLPG---HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---- 153 (254)
T ss_dssp HHHHHTSTT---CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC----
T ss_pred HHHHHhhcc---cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC----
Confidence 344455544 568899999999999999999886 568999999999999994 443 267999998877653
Q ss_pred hCCCCcccEEEE
Q psy2380 308 KYNIKKIDGILF 319 (733)
Q Consensus 308 ~~~~~~~dgil~ 319 (733)
..-+++|.|+.
T Consensus 154 -~~~~~fD~v~~ 164 (254)
T 1xtp_A 154 -LPPNTYDLIVI 164 (254)
T ss_dssp -CCSSCEEEEEE
T ss_pred -CCCCCeEEEEE
Confidence 11247898886
No 181
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=94.63 E-value=0.07 Score=50.04 Aligned_cols=77 Identities=19% Similarity=0.147 Sum_probs=59.4
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhC
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
+++++.+.. +++..++|.-.|.|..+..+++.. .+++|+|.++++++.+++. .+++++++++ ...
T Consensus 7 ~~~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-~~~v~~~~~d--------~~~ 71 (170)
T 3i9f_A 7 EEYLPNIFE---GKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-FDSVITLSDP--------KEI 71 (170)
T ss_dssp TTTHHHHHS---SCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-CTTSEEESSG--------GGS
T ss_pred HHHHHhcCc---CCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-CCCcEEEeCC--------CCC
Confidence 345566655 677899999999999999999886 3999999999999999532 3578888887 112
Q ss_pred CCCcccEEEEcC
Q psy2380 310 NIKKIDGILFDL 321 (733)
Q Consensus 310 ~~~~~dgil~DL 321 (733)
.-+++|.|+...
T Consensus 72 ~~~~~D~v~~~~ 83 (170)
T 3i9f_A 72 PDNSVDFILFAN 83 (170)
T ss_dssp CTTCEEEEEEES
T ss_pred CCCceEEEEEcc
Confidence 225799998763
No 182
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=94.63 E-value=0.13 Score=53.25 Aligned_cols=77 Identities=17% Similarity=0.300 Sum_probs=61.0
Q ss_pred hHHHHHhhhhcccccC-CCEEEEEccCC--ChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCcc
Q psy2380 228 FLNEAINWLNIENERI-NGIYIDATFGQ--GGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~-~~~~vD~T~G~--Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~ 300 (733)
.+..+++.+.. .. ...++|.=.|. +|.+.+++++..|+++|+++|.||.+++.|+ +|. ..+++++++.+.
T Consensus 65 fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~ 141 (277)
T 3giw_A 65 WMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADML 141 (277)
T ss_dssp HHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTT
T ss_pred HHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEeccc
Confidence 34556666653 22 35899998887 8999999998888999999999999999995 564 247999999999
Q ss_pred chHHHHH
Q psy2380 301 ELDIILK 307 (733)
Q Consensus 301 ~~~~~l~ 307 (733)
+...++.
T Consensus 142 ~~~~~l~ 148 (277)
T 3giw_A 142 DPASILD 148 (277)
T ss_dssp CHHHHHT
T ss_pred Chhhhhc
Confidence 9876554
No 183
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.62 E-value=0.078 Score=52.06 Aligned_cols=70 Identities=19% Similarity=0.266 Sum_probs=55.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|..+..+++.. + +++|+|.++++++.|+ ++. +.+++++++++.++. ..-+++|.|+.
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----FEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----SCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-----CCCCcEEEEEE
Confidence 46799999999999999988774 4 8999999999999984 442 468999999887653 11246898887
Q ss_pred c
Q psy2380 320 D 320 (733)
Q Consensus 320 D 320 (733)
+
T Consensus 110 ~ 110 (227)
T 1ve3_A 110 I 110 (227)
T ss_dssp E
T ss_pred c
Confidence 6
No 184
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.61 E-value=0.08 Score=53.54 Aligned_cols=87 Identities=9% Similarity=0.125 Sum_probs=65.6
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCcc
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~ 300 (733)
....+..+++.+.. +++..++|.-.|.|..+..+++.. .+++|+|.++++++.|+ ++. .+++.++.+++.
T Consensus 22 ~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 95 (260)
T 1vl5_A 22 KGSDLAKLMQIAAL---KGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE 95 (260)
T ss_dssp -CCCHHHHHHHHTC---CSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred CHHHHHHHHHHhCC---CCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH
Confidence 34455667777766 678899999999999999998874 38999999999999984 442 257999999887
Q ss_pred chHHHHHhCCCCcccEEEEcCC
Q psy2380 301 ELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 301 ~~~~~l~~~~~~~~dgil~DLG 322 (733)
++. ..-+++|.|+....
T Consensus 96 ~l~-----~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 96 QMP-----FTDERFHIVTCRIA 112 (260)
T ss_dssp CCC-----SCTTCEEEEEEESC
T ss_pred hCC-----CCCCCEEEEEEhhh
Confidence 753 11247999987743
No 185
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=94.54 E-value=0.13 Score=51.72 Aligned_cols=71 Identities=17% Similarity=0.334 Sum_probs=57.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
+++..++|.-.|.|..+..+++. .++++|+|.++++++.++ ++. .++++++++++.++. ..-+++|.|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-----LPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-----SCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-----CCCCCeeEEE
Confidence 56789999999999999999976 479999999999999984 442 468999999887753 1124689998
Q ss_pred Ec
Q psy2380 319 FD 320 (733)
Q Consensus 319 ~D 320 (733)
..
T Consensus 110 ~~ 111 (263)
T 2yqz_A 110 VV 111 (263)
T ss_dssp EE
T ss_pred EC
Confidence 75
No 186
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=94.54 E-value=0.076 Score=53.15 Aligned_cols=83 Identities=19% Similarity=0.152 Sum_probs=57.8
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHH----HHhc-ccC---CCcEEEEccCccc
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESV----SLGN-KIT---DSRFSIIHNCFTE 301 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~----~~a~-~l~---~~r~~~~~~~f~~ 301 (733)
+++.+... +++..++|.-+|.|..+..++++. ++++|+|+|.+++++ +.|+ +.. -.++.+++++..+
T Consensus 15 ~~~~~~~~----~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 15 DELTEIIG----QFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp HHHHHHHT----TCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred HHHHHHhC----CCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 45555554 467899999999999999998764 789999999995555 4443 332 2468888888877
Q ss_pred hHHHHHhCCCCcccEEEEcC
Q psy2380 302 LDIILKKYNIKKIDGILFDL 321 (733)
Q Consensus 302 ~~~~l~~~~~~~~dgil~DL 321 (733)
+.... .+.+|.+..++
T Consensus 90 l~~~~----~d~v~~i~~~~ 105 (225)
T 3p2e_A 90 LPFEL----KNIADSISILF 105 (225)
T ss_dssp CCGGG----TTCEEEEEEES
T ss_pred hhhhc----cCeEEEEEEeC
Confidence 63211 13466665554
No 187
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=94.48 E-value=0.12 Score=52.85 Aligned_cols=70 Identities=13% Similarity=0.041 Sum_probs=54.8
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--------------------CCcEEEEccCcc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--------------------DSRFSIIHNCFT 300 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--------------------~~r~~~~~~~f~ 300 (733)
.+++.++|.=+|.|.++..++++ +.+|+|+|..+++++.|+ +.. ..+++++++++.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 46789999999999999999876 458999999999999983 331 257899999888
Q ss_pred chHHHHHhCCCCcccEEE
Q psy2380 301 ELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 301 ~~~~~l~~~~~~~~dgil 318 (733)
++.. ...+++|+|+
T Consensus 144 ~l~~----~~~~~FD~V~ 157 (252)
T 2gb4_A 144 DLPR----ANIGKFDRIW 157 (252)
T ss_dssp TGGG----GCCCCEEEEE
T ss_pred cCCc----ccCCCEEEEE
Confidence 7642 1124688876
No 188
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=94.37 E-value=0.036 Score=57.16 Aligned_cols=88 Identities=17% Similarity=-0.008 Sum_probs=61.4
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHH
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDI 304 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~ 304 (733)
|...+.+++.+.. .++..++|.-.|.|..|..++++ ..+|+|+|.++++++.|+ +.... .++.++.+++.
T Consensus 31 ~~~~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~ 101 (261)
T 3iv6_A 31 PSDRENDIFLENI---VPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR---CVTIDLLDITA 101 (261)
T ss_dssp CCHHHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTS
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc---cceeeeeeccc
Confidence 4455667777766 77889999999999999999976 468999999999999994 55332 33444444322
Q ss_pred -HHHhCCCCcccEEEEcCCC
Q psy2380 305 -ILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 305 -~l~~~~~~~~dgil~DLGv 323 (733)
..... -+++|.|+.+..+
T Consensus 102 ~~~~~~-~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 102 EIPKEL-AGHFDFVLNDRLI 120 (261)
T ss_dssp CCCGGG-TTCCSEEEEESCG
T ss_pred cccccc-CCCccEEEEhhhh
Confidence 00011 1368888887654
No 189
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.27 E-value=0.071 Score=57.97 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=56.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CC-cEEEEccCccchHHHHHhCCCCcccE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DS-RFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~-r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
++..++|+-.|.|+-|..+++. ...+|+|+|.+++|++.|+ +.+ ++ ++++++++..+.-..+...+ .++|.
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~-~~fD~ 288 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHH-LTYDI 288 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTT-CCEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhC-CCccE
Confidence 4679999999999999999875 2348999999999999984 432 23 89999988655322222222 36999
Q ss_pred EEEc
Q psy2380 317 ILFD 320 (733)
Q Consensus 317 il~D 320 (733)
|++|
T Consensus 289 Ii~D 292 (385)
T 2b78_A 289 IIID 292 (385)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9987
No 190
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=94.24 E-value=0.055 Score=56.65 Aligned_cols=74 Identities=19% Similarity=0.208 Sum_probs=58.1
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+..+++.. +..+++++|+|+++++.|+ ++. .+|+++++++..+ +++.. -+++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~---~l~~~-~~~f 164 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE---YVRKF-KNEF 164 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH---HGGGC-SSCE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH---HHhhC-CCCc
Confidence 34789999999999999999874 5689999999999999984 441 4689999886543 33322 2479
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 165 D~Ii~d~ 171 (296)
T 1inl_A 165 DVIIIDS 171 (296)
T ss_dssp EEEEEEC
T ss_pred eEEEEcC
Confidence 9999883
No 191
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=94.21 E-value=0.013 Score=59.57 Aligned_cols=73 Identities=21% Similarity=0.346 Sum_probs=59.3
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccch
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTEL 302 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~ 302 (733)
.+...+.+++.+.. ++++.++|.-.|.|+.|..++++. ++|+|+|.|+++++.++ ++. .++++++++++.++
T Consensus 14 ~~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 14 SEKVLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF 87 (245)
T ss_dssp CTTTHHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhc
Confidence 34456677777766 678899999999999999999883 78999999999999984 443 46899999988765
Q ss_pred H
Q psy2380 303 D 303 (733)
Q Consensus 303 ~ 303 (733)
+
T Consensus 88 ~ 88 (245)
T 1yub_A 88 Q 88 (245)
T ss_dssp T
T ss_pred C
Confidence 3
No 192
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.19 E-value=0.067 Score=55.95 Aligned_cols=75 Identities=15% Similarity=0.137 Sum_probs=53.8
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----------CCcEE
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----------DSRFS 293 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----------~~r~~ 293 (733)
+..+++++++.+.. .+.++..++|.-.|.|+++..+++. +..+++|+|.++++++.|+ +.. ..+++
T Consensus 17 k~~l~~~~~~~l~~-~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~ 93 (313)
T 3bgv_A 17 KSVLIGEFLEKVRQ-KKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAE 93 (313)
T ss_dssp HHHHHHHHHHHHHH-TC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEE
T ss_pred HHHHHHHHHHHhhh-ccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEE
Confidence 34555666666653 0125789999999999999999984 4679999999999999984 432 12677
Q ss_pred EEccCccch
Q psy2380 294 IIHNCFTEL 302 (733)
Q Consensus 294 ~~~~~f~~~ 302 (733)
+++++..++
T Consensus 94 ~~~~D~~~~ 102 (313)
T 3bgv_A 94 FITADSSKE 102 (313)
T ss_dssp EEECCTTTS
T ss_pred EEEeccccc
Confidence 777766553
No 193
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.16 E-value=0.14 Score=48.51 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=54.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+++..++|.-.|.|..+..+++. +.+++|+|.++++++.++ ++ .++.+++.++.++. ..-+++|.|+.+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~--~~~~~~~~d~~~~~-----~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF--PEARWVVGDLSVDQ-----ISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC--TTSEEEECCTTTSC-----CCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC--CCCcEEEcccccCC-----CCCCceeEEEEC
Confidence 46789999999999999999876 468999999999999995 44 35888888876642 112468888875
No 194
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.15 E-value=0.058 Score=57.22 Aligned_cols=74 Identities=14% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+.++++.. +..+++++|+|+++++.|+ ++. ++|+++++++..+ .++.. -+++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~---~l~~~-~~~f 190 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK---FLENV-TNTY 190 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH---HHHHC-CSCE
T ss_pred CCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH---HHhhc-CCCc
Confidence 45789999999999999999864 6789999999999999984 442 4689999887544 34332 2479
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 191 DvIi~d~ 197 (321)
T 2pt6_A 191 DVIIVDS 197 (321)
T ss_dssp EEEEEEC
T ss_pred eEEEECC
Confidence 9999984
No 195
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.14 E-value=0.12 Score=51.23 Aligned_cols=70 Identities=16% Similarity=0.081 Sum_probs=55.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCcc-chHHHHHhCC-CCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFT-ELDIILKKYN-IKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~-~~~~~l~~~~-~~~~dgil~ 319 (733)
.+++.++|.-.|.|..+..+++. +.+|+|+|.++++++.+++. ..++++++++.. .+. .. -+++|.|+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~d~~~~~~-----~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-APHADVYEWNGKGELP-----AGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-CTTSEEEECCSCSSCC-----TTCCCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-CCCceEEEcchhhccC-----CcCCCCEEEEEe
Confidence 35789999999999999999987 46999999999999999532 357889998874 332 11 247899976
Q ss_pred c
Q psy2380 320 D 320 (733)
Q Consensus 320 D 320 (733)
.
T Consensus 118 ~ 118 (226)
T 3m33_A 118 R 118 (226)
T ss_dssp E
T ss_pred C
Confidence 4
No 196
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=94.13 E-value=0.051 Score=59.20 Aligned_cols=76 Identities=14% Similarity=0.108 Sum_probs=57.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcC-------------------------------------CCcEEEEEeCCHHHHHHh
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLG-------------------------------------KKGRLIAIDKDTESVSLG 284 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~-------------------------------------~~~~l~~~D~D~~a~~~a 284 (733)
+++..++|..+|.|+-..+.+.... +..+|+|+|+|+++++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 5678999999999999888876531 226899999999999999
Q ss_pred c-ccC----CCcEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 285 N-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 285 ~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
+ ++. ++++++.++++.++.. -.++|.|+.|--|
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~------~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKS------EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCC------SCBSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChhhcCc------CCCCcEEEECCCC
Confidence 4 442 3579999999887532 1368888877443
No 197
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=94.13 E-value=0.13 Score=49.82 Aligned_cols=73 Identities=12% Similarity=0.038 Sum_probs=56.2
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++..++|.-.|.|..+..+++.. +. +++|+|.++++++.++ +.. .+++++++++..++. ..-+++|.|+.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~v~~ 113 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG-FP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-----FPSASFDVVLE 113 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT-CC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-----SCSSCEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC-CC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-----CCCCcccEEEE
Confidence 357789999999999999999873 33 8999999999999995 443 357888888877652 11246888876
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
+.
T Consensus 114 ~~ 115 (215)
T 2pxx_A 114 KG 115 (215)
T ss_dssp ES
T ss_pred Cc
Confidence 53
No 198
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.12 E-value=0.13 Score=50.52 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=56.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--------CCcEEEEccCccchHHHHHhCCCC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--------DSRFSIIHNCFTELDIILKKYNIK 312 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--------~~r~~~~~~~f~~~~~~l~~~~~~ 312 (733)
++++.++|.-.|.|..+..+++. +.+++|+|.++++++.++ ++. .+++.++.+++.++. ..-+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 100 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-----FHDS 100 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-----SCTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-----CCCC
Confidence 45789999999999999999987 569999999999999984 432 136889999887753 1124
Q ss_pred cccEEEEc
Q psy2380 313 KIDGILFD 320 (733)
Q Consensus 313 ~~dgil~D 320 (733)
++|.|+..
T Consensus 101 ~~D~v~~~ 108 (235)
T 3sm3_A 101 SFDFAVMQ 108 (235)
T ss_dssp CEEEEEEE
T ss_pred ceeEEEEc
Confidence 78999875
No 199
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=94.10 E-value=0.069 Score=55.43 Aligned_cols=78 Identities=12% Similarity=0.224 Sum_probs=60.1
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--C----CcEEEEccCccc
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--D----SRFSIIHNCFTE 301 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~----~r~~~~~~~f~~ 301 (733)
...+++.+.+ +++.++|.-.|.|..+..+++. +.+|+|+|.++++++.|+ ++. + ++++++++++.+
T Consensus 72 ~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 72 AREFATRTGP----VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp HHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred HHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 3445555544 3459999999999999999986 468999999999999994 543 2 689999999887
Q ss_pred hHHHHHhCCCCcccEEEE
Q psy2380 302 LDIILKKYNIKKIDGILF 319 (733)
Q Consensus 302 ~~~~l~~~~~~~~dgil~ 319 (733)
+.. -+++|.|++
T Consensus 145 ~~~------~~~fD~v~~ 156 (299)
T 3g2m_A 145 FAL------DKRFGTVVI 156 (299)
T ss_dssp CCC------SCCEEEEEE
T ss_pred CCc------CCCcCEEEE
Confidence 642 146888875
No 200
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=94.10 E-value=0.077 Score=55.49 Aligned_cols=88 Identities=17% Similarity=0.178 Sum_probs=59.2
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEE-ccCccchHHHHHh
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSII-HNCFTELDIILKK 308 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~-~~~f~~~~~~l~~ 308 (733)
.++++.+.. ..++..++|.-.|.|+.|..+++. ..++|+|+|.++++++.+.+ .+.|+... ..|+..+.. +.
T Consensus 74 ~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r-~~~rv~~~~~~ni~~l~~--~~ 146 (291)
T 3hp7_A 74 EKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLR-QDDRVRSMEQYNFRYAEP--VD 146 (291)
T ss_dssp HHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHH-TCTTEEEECSCCGGGCCG--GG
T ss_pred HHHHHhcCC--CccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHH-hCcccceecccCceecch--hh
Confidence 455666654 024679999999999999999986 35799999999999887522 13465443 445555431 12
Q ss_pred CCCCcccEEEEcCCCC
Q psy2380 309 YNIKKIDGILFDLGIS 324 (733)
Q Consensus 309 ~~~~~~dgil~DLGvs 324 (733)
+....+|.+.+|+-+.
T Consensus 147 l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 147 FTEGLPSFASIDVSFI 162 (291)
T ss_dssp CTTCCCSEEEECCSSS
T ss_pred CCCCCCCEEEEEeeHh
Confidence 2223489999987543
No 201
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.08 E-value=0.076 Score=50.41 Aligned_cols=66 Identities=11% Similarity=0.152 Sum_probs=53.0
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
+++.++|.-.|.|..+..++++. +++|+|.++++++. .++++++++++.+. +.. +++|.|+.|..
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~-----~~~~~~~~~d~~~~---~~~---~~fD~i~~n~~ 87 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES-----HRGGNLVRADLLCS---INQ---ESVDVVVFNPP 87 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT-----CSSSCEEECSTTTT---BCG---GGCSEEEECCC
T ss_pred CCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc-----ccCCeEEECChhhh---ccc---CCCCEEEECCC
Confidence 56799999999999999998763 99999999999997 35688888887652 111 47999999754
Q ss_pred C
Q psy2380 323 I 323 (733)
Q Consensus 323 v 323 (733)
+
T Consensus 88 ~ 88 (170)
T 3q87_B 88 Y 88 (170)
T ss_dssp C
T ss_pred C
Confidence 4
No 202
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=94.06 E-value=0.17 Score=51.89 Aligned_cols=74 Identities=15% Similarity=0.096 Sum_probs=57.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.++..++|.-.|.|.++..+++. +.++++|+|.++++++.|+ ++. .+++++++++..++.- . .-+++|.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~--~~~~fD~ 136 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM--D--LGKEFDV 136 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC--C--CSSCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccccc--C--CCCCcCE
Confidence 46789999999999999997775 3569999999999999984 443 2578999998876521 0 1247899
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|+.+.
T Consensus 137 v~~~~ 141 (298)
T 1ri5_A 137 ISSQF 141 (298)
T ss_dssp EEEES
T ss_pred EEECc
Confidence 98873
No 203
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=93.98 E-value=0.19 Score=53.00 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=58.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
++..++|.-.|.|+-+..+++.. +..+++++|+|+++++.|+ ++. ++|+++++++..+ +++.. -+++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~---~l~~~-~~~f 182 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE---FLKNH-KNEF 182 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH---HHHHC-TTCE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH---HHHhc-CCCc
Confidence 34789999999999999999874 6789999999999999984 442 4689999886544 34332 2479
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 183 D~Ii~d~ 189 (314)
T 2b2c_A 183 DVIITDS 189 (314)
T ss_dssp EEEEECC
T ss_pred eEEEEcC
Confidence 9999875
No 204
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=93.89 E-value=0.07 Score=58.25 Aligned_cols=73 Identities=8% Similarity=0.081 Sum_probs=56.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcC-------------------------------------CCcEEEEEeCCHHHHHHh
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLG-------------------------------------KKGRLIAIDKDTESVSLG 284 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~-------------------------------------~~~~l~~~D~D~~a~~~a 284 (733)
+++..++|..+|.|.-..+.+.... +..+++|+|+|+++++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 5678999999999998877665431 126799999999999999
Q ss_pred c-ccC----CCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 285 N-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 285 ~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+ ++. +++++++++++.++.. -.++|.|+.|
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~------~~~fD~Iv~N 314 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQT------EDEYGVVVAN 314 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCC------CCCSCEEEEC
T ss_pred HHHHHHcCCCCceEEEECChHhCCC------CCCCCEEEEC
Confidence 4 442 4579999998877532 1368999988
No 205
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=93.84 E-value=0.13 Score=50.86 Aligned_cols=68 Identities=16% Similarity=0.361 Sum_probs=54.8
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+++.++|.-.|.|..+..+++.. + +++|+|.++++++.|+ +... +++++++++.++ .. -+++|.|+..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~---~~---~~~fD~v~~~ 110 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF-N--DITCVEASEEAISHAQGRLKD-GITYIHSRFEDA---QL---PRRYDNIVLT 110 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC-S--CEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGC---CC---SSCEEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHc---Cc---CCcccEEEEh
Confidence 46789999999999999998764 3 7999999999999995 4433 899999988775 11 2478999875
No 206
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.84 E-value=0.096 Score=55.68 Aligned_cols=81 Identities=14% Similarity=0.119 Sum_probs=62.6
Q ss_pred HHHHhhhhcccccC-CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 230 NEAINWLNIENERI-NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 230 ~Evl~~L~~~~~~~-~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
.++++.+.. .+ +..++|.-.|.|..+..++++. |+.+++++|. +++++.++ ++. .+|++++.+++.+..
T Consensus 168 ~~~l~~~~~---~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 242 (352)
T 3mcz_A 168 VDVVSELGV---FARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR 242 (352)
T ss_dssp HHHHHTCGG---GTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG
T ss_pred HHHHHhCCC---cCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc
Confidence 355666554 45 7899999999999999999997 7799999999 88998884 332 368999999988754
Q ss_pred HHHHhCCCCcccEEEE
Q psy2380 304 IILKKYNIKKIDGILF 319 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~ 319 (733)
.... +++|.|++
T Consensus 243 ~~~~----~~~D~v~~ 254 (352)
T 3mcz_A 243 NFEG----GAADVVML 254 (352)
T ss_dssp GGTT----CCEEEEEE
T ss_pred ccCC----CCccEEEE
Confidence 2111 35888887
No 207
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=93.84 E-value=0.078 Score=55.52 Aligned_cols=74 Identities=15% Similarity=0.179 Sum_probs=57.4
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--------CCcEEEEccCccchHHHHHhCCCCc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--------DSRFSIIHNCFTELDIILKKYNIKK 313 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--------~~r~~~~~~~f~~~~~~l~~~~~~~ 313 (733)
+.+.++|.-.|.|+-+.++++. .+..+|+++|+|+++++.|+ ++. ++|++++.++-.+. ++.. -++
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~-~~~ 157 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VNQT-SQT 157 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------CC-CCC
T ss_pred CCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH---Hhhc-CCC
Confidence 3578999999999999999987 36789999999999999994 441 45899998875543 3322 257
Q ss_pred ccEEEEcC
Q psy2380 314 IDGILFDL 321 (733)
Q Consensus 314 ~dgil~DL 321 (733)
+|.|+.|+
T Consensus 158 fDvIi~D~ 165 (294)
T 3adn_A 158 FDVIISDC 165 (294)
T ss_dssp EEEEEECC
T ss_pred ccEEEECC
Confidence 99999985
No 208
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=93.81 E-value=0.14 Score=49.36 Aligned_cols=69 Identities=12% Similarity=0.219 Sum_probs=54.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
++ .++|.-.|.|..+..+++. +.+++|+|.++++++.++ +.. +.++.++++++.++. ..-+++|.|+.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-----IVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS-----CCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC-----CCcCCccEEEE
Confidence 45 9999999999999998875 469999999999999984 443 347999999887753 11246899886
Q ss_pred c
Q psy2380 320 D 320 (733)
Q Consensus 320 D 320 (733)
.
T Consensus 101 ~ 101 (202)
T 2kw5_A 101 I 101 (202)
T ss_dssp E
T ss_pred E
Confidence 3
No 209
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=93.81 E-value=0.13 Score=51.01 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=55.7
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|.++..+++. ..+++|+|.++++++.++ ++. +.++.++++++.++. .. +++|.|+.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~-~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----IN-RKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----CS-CCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC-----cc-CCceEEEE
Confidence 5789999999999999999887 358999999999999984 443 237899998877653 11 46899887
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
..
T Consensus 108 ~~ 109 (246)
T 1y8c_A 108 CL 109 (246)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 210
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=93.79 E-value=0.066 Score=56.51 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=58.7
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--------CCcEEEEccCccchHHHHHhCCCCc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--------DSRFSIIHNCFTELDIILKKYNIKK 313 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--------~~r~~~~~~~f~~~~~~l~~~~~~~ 313 (733)
++..++|.-.|.|+-+..+++.. +..+++++|+|+++++.|+ ++. ++|+++++++..+ +++.. -++
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~---~l~~~-~~~ 151 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA---YLERT-EER 151 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH---HHHHC-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH---HHHhc-CCC
Confidence 35789999999999999999874 6789999999999999984 442 4689999887654 34432 257
Q ss_pred ccEEEEcC
Q psy2380 314 IDGILFDL 321 (733)
Q Consensus 314 ~dgil~DL 321 (733)
+|.|+.|.
T Consensus 152 fD~Ii~d~ 159 (314)
T 1uir_A 152 YDVVIIDL 159 (314)
T ss_dssp EEEEEEEC
T ss_pred ccEEEECC
Confidence 99999984
No 211
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=93.69 E-value=0.093 Score=57.09 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=56.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcC-------------------------------------CCcEEEEEeCCHHHHHHh
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLG-------------------------------------KKGRLIAIDKDTESVSLG 284 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~-------------------------------------~~~~l~~~D~D~~a~~~a 284 (733)
+++..++|-.+|.|.-..+.+.... ...+++|+|+|++|++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 5678999999999998877665431 126799999999999999
Q ss_pred c-ccC----CCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 285 N-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 285 ~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+ ++. +++++++++++.++.. . .++|.|+.|
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~----~--~~fD~Iv~N 307 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKT----N--KINGVLISN 307 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCC----C--CCSCEEEEC
T ss_pred HHHHHHcCCCCceEEEECChHHCCc----c--CCcCEEEEC
Confidence 4 442 4679999999887532 1 368888877
No 212
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=93.57 E-value=0.056 Score=55.75 Aligned_cols=69 Identities=20% Similarity=0.259 Sum_probs=51.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-c-cC----CCcEEEE--ccCccchHHHHHhCCCCc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-K-IT----DSRFSII--HNCFTELDIILKKYNIKK 313 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~-l~----~~r~~~~--~~~f~~~~~~l~~~~~~~ 313 (733)
+++..++|.-+|.||.|..+++. ++|+|+|.++. ...++ + .. +.++.++ ++++.++. -.+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m-~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-------~~~ 140 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTL-GVGGHEVPRITESYGWNIVKFKSRVDIHTLP-------VER 140 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECC-CCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-------CCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchh-hhhhhhhhhhhhccCCCeEEEecccCHhHCC-------CCC
Confidence 57889999999999999999876 68999999994 22231 1 11 1268888 88877743 147
Q ss_pred ccEEEEcCC
Q psy2380 314 IDGILFDLG 322 (733)
Q Consensus 314 ~dgil~DLG 322 (733)
+|.|+.|.+
T Consensus 141 fD~V~sd~~ 149 (265)
T 2oxt_A 141 TDVIMCDVG 149 (265)
T ss_dssp CSEEEECCC
T ss_pred CcEEEEeCc
Confidence 999999875
No 213
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.56 E-value=0.14 Score=49.51 Aligned_cols=69 Identities=19% Similarity=0.316 Sum_probs=55.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+++.++|.-.|.|..+..+++. +.+++|+|.++++++.+++. ..++.++++++.++. + .-+++|.|+..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~d~~~~~--~---~~~~fD~v~~~ 109 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-HPSVTFHHGTITDLS--D---SPKRWAGLLAW 109 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-CTTSEEECCCGGGGG--G---SCCCEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-CCCCeEEeCcccccc--c---CCCCeEEEEeh
Confidence 4788999999999999999987 45899999999999998532 247899999988764 1 12579999875
No 214
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=93.55 E-value=0.2 Score=53.36 Aligned_cols=72 Identities=15% Similarity=0.245 Sum_probs=56.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.+++.++|.-.|.|..+..+++. ...+|+|+|.++ +++.|+ +++ ++++++++++..++. ...+++|.
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~ 134 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-----LPVEKVDV 134 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----CSCSCEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-----CCCCcEEE
Confidence 56789999999999999999876 346999999996 888874 442 378999999887752 22247999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|+.+.
T Consensus 135 Ivs~~ 139 (340)
T 2fyt_A 135 IISEW 139 (340)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99864
No 215
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.52 E-value=0.13 Score=52.61 Aligned_cols=82 Identities=12% Similarity=0.211 Sum_probs=64.0
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHH
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDI 304 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~ 304 (733)
+.+.+++++.+.. .++..++|.-.|.|..+..+++ +.++++|+|.++++++.++ ++ ++++++.++..++..
T Consensus 43 ~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~ 114 (279)
T 3ccf_A 43 WQYGEDLLQLLNP---QPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY--PHLHFDVADARNFRV 114 (279)
T ss_dssp SSSCCHHHHHHCC---CTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC--TTSCEEECCTTTCCC
T ss_pred HHHHHHHHHHhCC---CCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC--CCCEEEECChhhCCc
Confidence 3445667777766 6788999999999999999997 5689999999999999984 44 567788887776531
Q ss_pred HHHhCCCCcccEEEEcC
Q psy2380 305 ILKKYNIKKIDGILFDL 321 (733)
Q Consensus 305 ~l~~~~~~~~dgil~DL 321 (733)
-+++|.|+...
T Consensus 115 ------~~~fD~v~~~~ 125 (279)
T 3ccf_A 115 ------DKPLDAVFSNA 125 (279)
T ss_dssp ------SSCEEEEEEES
T ss_pred ------CCCcCEEEEcc
Confidence 14688888754
No 216
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=93.45 E-value=0.071 Score=56.05 Aligned_cols=74 Identities=14% Similarity=0.160 Sum_probs=58.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc-------CCCcEEEEccCccchHHHHHhCCCCcc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI-------TDSRFSIIHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l-------~~~r~~~~~~~f~~~~~~l~~~~~~~~ 314 (733)
+++.++|.-.|.|+-+..+++.. +..+++++|+|+++++.|+ ++ ..+|+++++++..+ +++.. -+++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~---~l~~~-~~~f 169 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE---FMKQN-QDAF 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH---HHHTC-SSCE
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH---HHhhC-CCCc
Confidence 45789999999999999999874 6789999999999999984 44 25789999876543 44432 2579
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|.
T Consensus 170 D~Ii~d~ 176 (304)
T 2o07_A 170 DVIITDS 176 (304)
T ss_dssp EEEEEEC
T ss_pred eEEEECC
Confidence 9999974
No 217
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=93.44 E-value=0.16 Score=54.33 Aligned_cols=72 Identities=17% Similarity=0.218 Sum_probs=57.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.+++.++|.-.|.|..+..+++. +..+|+|+|.++ +++.|+ +.. ++++++++++..++. ...+++|.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~ 136 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE-----LPVEKVDI 136 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-----CSSSCEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc-----CCCCceEE
Confidence 46789999999999999999987 457999999994 888874 332 467999999988762 12257999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|+.+.
T Consensus 137 Iis~~ 141 (349)
T 3q7e_A 137 IISEW 141 (349)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99875
No 218
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=93.43 E-value=0.34 Score=52.04 Aligned_cols=79 Identities=15% Similarity=0.157 Sum_probs=60.6
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
.++++.+.. .++..++|.-.|.|..+..++++. |+.+++++|. +++++.|+ ++. .+|++++..+|.+
T Consensus 192 ~~l~~~~~~---~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~--- 263 (369)
T 3gwz_A 192 GQVAAAYDF---SGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE--- 263 (369)
T ss_dssp HHHHHHSCC---TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT---
T ss_pred HHHHHhCCC---ccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC---
Confidence 445555544 567899999999999999999996 7889999999 99999984 442 4789999998852
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
... .++|.|++-
T Consensus 264 ---~~p-~~~D~v~~~ 275 (369)
T 3gwz_A 264 ---TIP-DGADVYLIK 275 (369)
T ss_dssp ---CCC-SSCSEEEEE
T ss_pred ---CCC-CCceEEEhh
Confidence 111 158888763
No 219
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=93.40 E-value=0.13 Score=50.96 Aligned_cols=69 Identities=13% Similarity=0.112 Sum_probs=54.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+++.++|.-.|.|..+..+++ +..+++|+|.++++++.|+ ++. .++++++++++.++. . -.++|.|
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~---~~~fD~v 136 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---P---TELFDLI 136 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---C---SSCEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC---C---CCCeeEE
Confidence 356999999999999998865 4689999999999999984 443 257999999988753 1 1368888
Q ss_pred EEc
Q psy2380 318 LFD 320 (733)
Q Consensus 318 l~D 320 (733)
+..
T Consensus 137 ~~~ 139 (235)
T 3lcc_A 137 FDY 139 (235)
T ss_dssp EEE
T ss_pred EEC
Confidence 753
No 220
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=93.29 E-value=0.16 Score=50.42 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=54.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|..+..+++. .+++|+|.++++++.|+ +.. ..+++++++++.++. .. +++|.|+.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-----LP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-----CS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-----CC-CCcCEEEE
Confidence 4689999999999999998865 68999999999999984 442 457889988876652 11 47899887
Q ss_pred cC
Q psy2380 320 DL 321 (733)
Q Consensus 320 DL 321 (733)
..
T Consensus 103 ~~ 104 (243)
T 3d2l_A 103 LC 104 (243)
T ss_dssp CT
T ss_pred eC
Confidence 54
No 221
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=93.29 E-value=0.12 Score=53.17 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=60.8
Q ss_pred HHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc----C---CCcEEEEccCccch
Q psy2380 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI----T---DSRFSIIHNCFTEL 302 (733)
Q Consensus 231 Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l----~---~~r~~~~~~~f~~~ 302 (733)
.+.+.+.. .++..++|.-.|.|.++..+++. +.+|+|+|.++++++.|+ +. . ..++.+.++++.++
T Consensus 48 ~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 48 WLLGLLRQ---HGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHHHHHH---TTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred HHHHHhcc---cCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 34444554 56789999999999999999987 349999999999999984 33 1 24788999988887
Q ss_pred HHHHHhCCCCcccEEEE
Q psy2380 303 DIILKKYNIKKIDGILF 319 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~ 319 (733)
..-+ ..-+++|.|+.
T Consensus 122 ~~~~--~~~~~fD~V~~ 136 (293)
T 3thr_A 122 DKDV--PAGDGFDAVIC 136 (293)
T ss_dssp HHHS--CCTTCEEEEEE
T ss_pred cccc--ccCCCeEEEEE
Confidence 5332 12257998886
No 222
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.27 E-value=0.22 Score=53.07 Aligned_cols=79 Identities=16% Similarity=0.152 Sum_probs=61.3
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
..++++.+.. .++..++|.-.|.|..+..++++. |+.+++++|. +++++.|+ ++. .+|++++.+++.+..
T Consensus 179 ~~~l~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 253 (359)
T 1x19_A 179 IQLLLEEAKL---DGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES 253 (359)
T ss_dssp HHHHHHHCCC---TTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC
T ss_pred HHHHHHhcCC---CCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC
Confidence 3455666654 567899999999999999999996 7789999999 99999984 442 467999999887641
Q ss_pred HHHHhCCCCcccEEEE
Q psy2380 304 IILKKYNIKKIDGILF 319 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~ 319 (733)
.+..|.|++
T Consensus 254 -------~~~~D~v~~ 262 (359)
T 1x19_A 254 -------YPEADAVLF 262 (359)
T ss_dssp -------CCCCSEEEE
T ss_pred -------CCCCCEEEE
Confidence 122388877
No 223
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=93.22 E-value=0.25 Score=50.49 Aligned_cols=84 Identities=15% Similarity=0.170 Sum_probs=60.7
Q ss_pred hhhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHH
Q psy2380 225 GFLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI 304 (733)
Q Consensus 225 ~pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~ 304 (733)
+|-...++++.+.. ....++.++|.-+|.|..+..+.+.. .+|+|+|.++++++.|++. .+++++++++.++.
T Consensus 22 Rp~yp~~l~~~l~~-~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~--~~v~~~~~~~e~~~- 94 (257)
T 4hg2_A 22 RPRYPRALFRWLGE-VAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH--PRVTYAVAPAEDTG- 94 (257)
T ss_dssp CCCCCHHHHHHHHH-HSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC--TTEEEEECCTTCCC-
T ss_pred CCCcHHHHHHHHHH-hcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhc--CCceeehhhhhhhc-
Confidence 44444555555532 00235789999999999999998763 5899999999999988543 57999999887753
Q ss_pred HHHhCCCCcccEEEE
Q psy2380 305 ILKKYNIKKIDGILF 319 (733)
Q Consensus 305 ~l~~~~~~~~dgil~ 319 (733)
..-+++|.|+.
T Consensus 95 ----~~~~sfD~v~~ 105 (257)
T 4hg2_A 95 ----LPPASVDVAIA 105 (257)
T ss_dssp ----CCSSCEEEEEE
T ss_pred ----ccCCcccEEEE
Confidence 11246888875
No 224
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=93.17 E-value=0.16 Score=51.39 Aligned_cols=68 Identities=9% Similarity=0.235 Sum_probs=55.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcC
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDL 321 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DL 321 (733)
+++.++|.-.|.|..+..+++. ..+++|+|.++++++.|+ ++ .+++++++++.++.. -+++|.|+...
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~------~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRN--PDAVLHHGDMRDFSL------GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHC--TTSEEEECCTTTCCC------SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhC--CCCEEEECChHHCCc------cCCcCEEEEcC
Confidence 4689999999999999999876 358999999999999995 44 378999998877542 14789998754
No 225
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=93.14 E-value=0.17 Score=54.97 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|..+..+++. +.+|+|+|.|+.+++.|+ ++. +-++++++++..+... . -+++|.|+.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~---~--~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALT---E--EARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSC---T--TCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccc---c--CCCeEEEEE
Confidence 5779999999999999999986 469999999999999994 443 3358888888766421 1 247999998
Q ss_pred cCC
Q psy2380 320 DLG 322 (733)
Q Consensus 320 DLG 322 (733)
|.=
T Consensus 305 npp 307 (381)
T 3dmg_A 305 NPP 307 (381)
T ss_dssp CCC
T ss_pred CCc
Confidence 743
No 226
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=93.13 E-value=0.12 Score=50.27 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=53.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
.+++.++|.-.|.|..+..+++. +.+++|+|.++++++.++ ++ ++.+++.++.++. .-+++|.|+..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~d~~~~~------~~~~fD~v~~~ 109 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL---GRPVRTMLFHQLD------AIDAYDAVWAH 109 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---TSCCEECCGGGCC------CCSCEEEEEEC
T ss_pred CCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc---CCceEEeeeccCC------CCCcEEEEEec
Confidence 45789999999999999999976 469999999999999995 43 4566777777654 12478888874
No 227
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=93.11 E-value=0.063 Score=56.52 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=52.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeC----CHHHHHHh--cccCCCcEEEEcc-CccchHHHHHhCCCCcc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDK----DTESVSLG--NKITDSRFSIIHN-CFTELDIILKKYNIKKI 314 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~----D~~a~~~a--~~l~~~r~~~~~~-~f~~~~~~l~~~~~~~~ 314 (733)
+++..++|.-+|.||.|..++++ ++|+|+|. .+..++.. +++..++++++++ ++.++. ..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~-------~~~f 149 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP-------PERC 149 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC-------CCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC-------cCCC
Confidence 56889999999999999999876 57999999 44333221 1221257999988 666542 2479
Q ss_pred cEEEEcCCCCc
Q psy2380 315 DGILFDLGISS 325 (733)
Q Consensus 315 dgil~DLGvss 325 (733)
|.|+.|.+.++
T Consensus 150 D~V~sd~~~~~ 160 (305)
T 2p41_A 150 DTLLCDIGESS 160 (305)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEECCcccc
Confidence 99999987753
No 228
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.10 E-value=0.22 Score=58.99 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=64.7
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---------CCcEEEEccC
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---------DSRFSIIHNC 298 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---------~~r~~~~~~~ 298 (733)
.+.+++.+.. .+++.++|.-.|.|..+..+++..++..+|+|+|+++++++.|+ ++. -.++++++++
T Consensus 710 le~LLelL~~---~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 710 VEYALKHIRE---SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHH---SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHhcc---cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 3445555655 57889999999999999999988656689999999999999994 332 1479999998
Q ss_pred ccchHHHHHhCCCCcccEEEEc
Q psy2380 299 FTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 299 f~~~~~~l~~~~~~~~dgil~D 320 (733)
..++.. ...++|.|+..
T Consensus 787 a~dLp~-----~d~sFDlVV~~ 803 (950)
T 3htx_A 787 ILEFDS-----RLHDVDIGTCL 803 (950)
T ss_dssp TTSCCT-----TSCSCCEEEEE
T ss_pred hHhCCc-----ccCCeeEEEEe
Confidence 877542 12468888883
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=93.08 E-value=0.065 Score=55.59 Aligned_cols=69 Identities=19% Similarity=0.242 Sum_probs=51.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-c-cC----CCcEEEE--ccCccchHHHHHhCCCCc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-K-IT----DSRFSII--HNCFTELDIILKKYNIKK 313 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~-l~----~~r~~~~--~~~f~~~~~~l~~~~~~~ 313 (733)
+++..++|.-.|.||.|..++++ ++|+|+|.++. ...++ + .. +.++.++ ++++.++. -++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m-~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-------~~~ 148 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTL-GTSGHEKPRLVETFGWNLITFKSKVDVTKME-------PFQ 148 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECC-CCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-------CCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc----CCEEEEECchh-hhhhhhchhhhhhcCCCeEEEeccCcHhhCC-------CCC
Confidence 57889999999999999999876 68999999993 23331 2 11 1268888 77776643 247
Q ss_pred ccEEEEcCC
Q psy2380 314 IDGILFDLG 322 (733)
Q Consensus 314 ~dgil~DLG 322 (733)
+|.|+.|.+
T Consensus 149 fD~Vvsd~~ 157 (276)
T 2wa2_A 149 ADTVLCDIG 157 (276)
T ss_dssp CSEEEECCC
T ss_pred cCEEEECCC
Confidence 999998875
No 230
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=92.96 E-value=0.28 Score=49.74 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=56.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
.+++.++|.-.|.|..+..+++.+ ++.+++|+|.++++++.|++. ..++.++.+++.++. ..-+++|.|+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~d~~~~~-----~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKR-YPQVTFCVASSHRLP-----FSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHH-CTTSEEEECCTTSCS-----BCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHh-CCCcEEEEcchhhCC-----CCCCceeEEEE
Confidence 357899999999999999999886 668999999999999999532 246788888877653 11146898885
No 231
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=92.96 E-value=0.15 Score=55.50 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=58.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCc-EEEEccCccchHHHHH-hCCCCcc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSR-FSIIHNCFTELDIILK-KYNIKKI 314 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r-~~~~~~~f~~~~~~l~-~~~~~~~ 314 (733)
+++..++|+-.|.|+=+..++++...-.+|+++|+|++|++.++ +++ +++ +++++++- .++++ +.+ .++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da---~~~l~~~~~-~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEA---NFFLRKEWG-FGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH---HHHHHSCCS-SCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCH---HHHHHHhhC-CCC
Confidence 35789999999999999999988632368999999999999983 442 355 99988764 33454 432 469
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|++|-
T Consensus 127 D~V~lDP 133 (392)
T 3axs_A 127 DYVDLDP 133 (392)
T ss_dssp EEEEECC
T ss_pred cEEEECC
Confidence 9999986
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=92.89 E-value=0.19 Score=51.63 Aligned_cols=66 Identities=9% Similarity=-0.094 Sum_probs=54.5
Q ss_pred CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------CCcEEEEccCccchHHHHHhCCCCccc
Q psy2380 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------DSRFSIIHNCFTELDIILKKYNIKKID 315 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~~r~~~~~~~f~~~~~~l~~~~~~~~d 315 (733)
+..++|.-.|.|+-+.++++. + .++.++|+|+++++.|+ ++. ++|++++.++-.+.. +++|
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--------~~fD 141 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--------KKYD 141 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--------CCEE
T ss_pred CCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--------hhCC
Confidence 468999999999999999987 4 89999999999999994 442 468999987654431 4799
Q ss_pred EEEEc
Q psy2380 316 GILFD 320 (733)
Q Consensus 316 gil~D 320 (733)
.|+.|
T Consensus 142 ~Ii~d 146 (262)
T 2cmg_A 142 LIFCL 146 (262)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99998
No 233
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=92.51 E-value=0.096 Score=55.83 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=58.0
Q ss_pred HHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHh
Q psy2380 232 AINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKK 308 (733)
Q Consensus 232 vl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~ 308 (733)
+++.+.+ .+++.++|.-.|.|..+..+++.. |+.+++|+|.++.+++.|+ ++. +-+.+++++++.+..
T Consensus 188 ll~~l~~---~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~----- 258 (343)
T 2pjd_A 188 LLSTLTP---HTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV----- 258 (343)
T ss_dssp HHHHSCT---TCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-----
T ss_pred HHHhcCc---CCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-----
Confidence 3444434 456789999999999999999885 7789999999999999984 443 223556666654421
Q ss_pred CCCCcccEEEEcC
Q psy2380 309 YNIKKIDGILFDL 321 (733)
Q Consensus 309 ~~~~~~dgil~DL 321 (733)
-+++|.|+.+.
T Consensus 259 --~~~fD~Iv~~~ 269 (343)
T 2pjd_A 259 --KGRFDMIISNP 269 (343)
T ss_dssp --CSCEEEEEECC
T ss_pred --cCCeeEEEECC
Confidence 14789998764
No 234
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=92.44 E-value=0.26 Score=53.25 Aligned_cols=71 Identities=14% Similarity=0.227 Sum_probs=57.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.+++.++|.-.|.|..+..+++. + ..+|+|+|.+ ++++.|+ +++ .+++++++++..++.- . +++|.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~-~~~D~ 132 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL-----P-EKVDV 132 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC-----S-SCEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc-----C-CcceE
Confidence 56889999999999999999987 2 3599999999 8998884 332 4689999999877541 1 57999
Q ss_pred EEEcC
Q psy2380 317 ILFDL 321 (733)
Q Consensus 317 il~DL 321 (733)
|+.+.
T Consensus 133 Iv~~~ 137 (376)
T 3r0q_C 133 IISEW 137 (376)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99865
No 235
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=92.38 E-value=0.22 Score=54.85 Aligned_cols=69 Identities=13% Similarity=0.153 Sum_probs=54.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGIL 318 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil 318 (733)
.++..++|.-.|.|.-|..+++. ..+|+|+|.+++|++.|+ +.. +-.+++++++..++. .. ++|.|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~---~~----~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS---VK----GFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC---CT----TCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcC---cc----CCCEEE
Confidence 45789999999999999999875 358999999999999994 442 212899999877642 11 689999
Q ss_pred Ec
Q psy2380 319 FD 320 (733)
Q Consensus 319 ~D 320 (733)
+|
T Consensus 359 ~d 360 (425)
T 2jjq_A 359 VD 360 (425)
T ss_dssp EC
T ss_pred Ec
Confidence 85
No 236
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=92.19 E-value=0.27 Score=52.62 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=61.1
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~ 303 (733)
..++++.+.. +++..++|.-.|.|..+..++++. |+.+++++|. +++++.|+ ++. .+|++++++++.+
T Consensus 171 ~~~~~~~~~~---~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-- 243 (374)
T 1qzz_A 171 YEAPADAYDW---SAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-- 243 (374)
T ss_dssp THHHHHTSCC---TTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS--
T ss_pred HHHHHHhCCC---CCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC--
Confidence 3556666554 567899999999999999999997 7789999999 99999984 442 3589999998754
Q ss_pred HHHHhCCCCcccEEEEc
Q psy2380 304 IILKKYNIKKIDGILFD 320 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~D 320 (733)
.+. ..+|.|++.
T Consensus 244 -~~~----~~~D~v~~~ 255 (374)
T 1qzz_A 244 -PLP----VTADVVLLS 255 (374)
T ss_dssp -CCS----CCEEEEEEE
T ss_pred -cCC----CCCCEEEEe
Confidence 111 137777763
No 237
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=92.00 E-value=0.43 Score=52.07 Aligned_cols=81 Identities=15% Similarity=0.269 Sum_probs=60.5
Q ss_pred HHHHHhhhhcccccCCCEEEEEccC------CChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccch
Q psy2380 229 LNEAINWLNIENERINGIYIDATFG------QGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTEL 302 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G------~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~ 302 (733)
.++.++.++. ++..++|.=+| .||-|..+++++.|+++|+|+|.++++. ...+|+++++++..++
T Consensus 206 Ye~lL~~l~~----~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-----~~~~rI~fv~GDa~dl 276 (419)
T 3sso_A 206 YDRHFRDYRN----QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-----VDELRIRTIQGDQNDA 276 (419)
T ss_dssp HHHHHGGGTT----SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-----GCBTTEEEEECCTTCH
T ss_pred HHHHHHhhcC----CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-----hcCCCcEEEEeccccc
Confidence 3445555544 45799999999 6899999999876889999999999862 1246899999999886
Q ss_pred HHH--H-HhCCCCcccEEEEc
Q psy2380 303 DII--L-KKYNIKKIDGILFD 320 (733)
Q Consensus 303 ~~~--l-~~~~~~~~dgil~D 320 (733)
+-. + +.. +++|.|+.|
T Consensus 277 pf~~~l~~~d--~sFDlVisd 295 (419)
T 3sso_A 277 EFLDRIARRY--GPFDIVIDD 295 (419)
T ss_dssp HHHHHHHHHH--CCEEEEEEC
T ss_pred chhhhhhccc--CCccEEEEC
Confidence 432 1 112 479999876
No 238
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=91.86 E-value=0.36 Score=47.62 Aligned_cols=66 Identities=8% Similarity=0.214 Sum_probs=53.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|.++..+++.. + +++|+|.++++++.++ ++ ++++++++++.++.. -.++|.|+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~~D~s~~~~~~a~~~~--~~~~~~~~d~~~~~~------~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF-G--DTAGLELSEDMLTHARKRL--PDATLHQGDMRDFRL------GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH-S--EEEEEESCHHHHHHHHHHC--TTCEEEECCTTTCCC------SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhC--CCCEEEECCHHHccc------CCCCcEEEE
Confidence 56899999999999999999985 3 8999999999999995 44 468888888876531 146888885
No 239
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=91.77 E-value=0.59 Score=48.13 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=51.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeC-CHHHHHHhc-cc-----CC--------CcEEEEccCccc-hHHH
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDK-DTESVSLGN-KI-----TD--------SRFSIIHNCFTE-LDII 305 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~-D~~a~~~a~-~l-----~~--------~r~~~~~~~f~~-~~~~ 305 (733)
.++..++|.-.|.|..+..+++. + .++|+|+|. ++++++.|+ +. .. +++++......+ ....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 45779999999999999987764 2 359999999 999999984 44 21 367776544444 3333
Q ss_pred HHhCCCCcccEEEE
Q psy2380 306 LKKYNIKKIDGILF 319 (733)
Q Consensus 306 l~~~~~~~~dgil~ 319 (733)
.....-.++|.|+.
T Consensus 156 ~~~~~~~~fD~Ii~ 169 (281)
T 3bzb_A 156 QRCTGLQRFQVVLL 169 (281)
T ss_dssp HHHHSCSSBSEEEE
T ss_pred HhhccCCCCCEEEE
Confidence 32111246888876
No 240
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=91.74 E-value=0.23 Score=49.87 Aligned_cols=70 Identities=11% Similarity=0.111 Sum_probs=53.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCc-cchHHHHHhCCCCcccE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCF-TELDIILKKYNIKKIDG 316 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f-~~~~~~l~~~~~~~~dg 316 (733)
++..++|.-.|.|-=+.++++. +|.++|+|+|+|+.|++.|+ +.. .+|+++.+++- +.+.. . +++|.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~---~---~~~D~ 87 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE---T---DQVSV 87 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---G---GCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---C---cCCCE
Confidence 5789999999999999999876 57889999999999999994 442 46899998874 33321 0 14787
Q ss_pred EEE
Q psy2380 317 ILF 319 (733)
Q Consensus 317 il~ 319 (733)
|+.
T Consensus 88 Ivi 90 (225)
T 3kr9_A 88 ITI 90 (225)
T ss_dssp EEE
T ss_pred EEE
Confidence 663
No 241
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=91.65 E-value=0.25 Score=49.79 Aligned_cols=71 Identities=13% Similarity=0.025 Sum_probs=54.2
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
+++..++|.-.|.|-=+.++++. ++..+|+|+|+|+.+++.|+ +++ .+|+++.+++--+. +... +++|.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~---~~~~--~~~D~ 93 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSA---FEEA--DNIDT 93 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG---CCGG--GCCCE
T ss_pred CCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhc---cccc--cccCE
Confidence 35789999999999999998876 57789999999999999994 442 57899999874332 1110 25887
Q ss_pred EE
Q psy2380 317 IL 318 (733)
Q Consensus 317 il 318 (733)
|+
T Consensus 94 Iv 95 (230)
T 3lec_A 94 IT 95 (230)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 242
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=91.63 E-value=0.42 Score=50.52 Aligned_cols=71 Identities=14% Similarity=0.266 Sum_probs=55.1
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccE
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDG 316 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dg 316 (733)
.++..++|.-.|.|.-+..+++. +..+|+|+|.+ ++++.|+ +++ .+++++++++..++. ...+++|.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~ 108 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH-----LPFPKVDI 108 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC-----CSSSCEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc-----CCCCcccE
Confidence 45789999999999999998875 34699999999 5788774 432 468999999887753 12247999
Q ss_pred EEEc
Q psy2380 317 ILFD 320 (733)
Q Consensus 317 il~D 320 (733)
|+.+
T Consensus 109 Ivs~ 112 (328)
T 1g6q_1 109 IISE 112 (328)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9876
No 243
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=91.60 E-value=0.18 Score=54.70 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=54.7
Q ss_pred CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-----------------C-CcEEEEccCccchHH
Q psy2380 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-----------------D-SRFSIIHNCFTELDI 304 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-----------------~-~r~~~~~~~f~~~~~ 304 (733)
+..++|+..|.|.-+..+++.. +..+|+++|+|++|++.++ +++ + +++++++++..+
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~--- 123 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR--- 123 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH---
T ss_pred CCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHH---
Confidence 5789999999999999999986 4578999999999999983 332 1 237777776544
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
.+.... .++|.|++|
T Consensus 124 ~~~~~~-~~fD~I~lD 138 (378)
T 2dul_A 124 LMAERH-RYFHFIDLD 138 (378)
T ss_dssp HHHHST-TCEEEEEEC
T ss_pred HHHhcc-CCCCEEEeC
Confidence 343321 369999987
No 244
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=91.46 E-value=0.5 Score=50.33 Aligned_cols=79 Identities=15% Similarity=0.179 Sum_probs=58.9
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
+.+++.+.. .++..++|.-.|.|..+..+++. +.++|+|+|.++ .++.|+ +++ +++++++++++.++.
T Consensus 40 ~~i~~~l~~---~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 112 (348)
T 2y1w_A 40 RAILQNHTD---FKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS- 112 (348)
T ss_dssp HHHHHTGGG---TTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-
T ss_pred HHHHhcccc---CCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-
Confidence 344455554 57889999999999999999875 457999999997 556663 332 368999999988753
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
.. +++|.|+.+
T Consensus 113 ----~~-~~~D~Ivs~ 123 (348)
T 2y1w_A 113 ----LP-EQVDIIISE 123 (348)
T ss_dssp ----CS-SCEEEEEEC
T ss_pred ----CC-CceeEEEEe
Confidence 11 468988875
No 245
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=91.45 E-value=0.5 Score=46.97 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=52.4
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
++++.++|.-.|.|..+..+.+. +.+++|+|.++++++.+++ ++.+++.+..+ .+....-+++|.|+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~----~~~~~~~d~~~---~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEG----KFNVVKSDAIE---YLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHT----TSEEECSCHHH---HHHTSCTTCBSEEEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHh----hcceeeccHHH---HhhhcCCCCeeEEEEC
Confidence 46789999999999999999886 4579999999999999843 26666665443 3333333579999874
No 246
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=91.37 E-value=1.1 Score=47.73 Aligned_cols=66 Identities=11% Similarity=0.170 Sum_probs=52.9
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC---CCcEEEEccCcc
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT---DSRFSIIHNCFT 300 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~---~~r~~~~~~~f~ 300 (733)
.++++.+.- .+.+.++|.-.|.|..+.+|+++. |+.+++.+|. |++++.|+ ++. .+|++++.++|-
T Consensus 169 ~~~~~~~~~---~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~ 238 (353)
T 4a6d_A 169 RSVLTAFDL---SVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFF 238 (353)
T ss_dssp HHHHHSSCG---GGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTT
T ss_pred HHHHHhcCc---ccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccc
Confidence 344555443 456799999999999999999997 8899999998 88898884 443 479999999874
No 247
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=91.29 E-value=0.29 Score=57.43 Aligned_cols=74 Identities=11% Similarity=0.100 Sum_probs=57.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----C-CcEEEEccCccchHHHHHhCCCCccc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----D-SRFSIIHNCFTELDIILKKYNIKKID 315 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~-~r~~~~~~~f~~~~~~l~~~~~~~~d 315 (733)
.++..++|+-.|.|+-|..+++. ...+|+++|.++++++.|+ +++ + +++++++++..+ +++..+ .++|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~---~l~~~~-~~fD 611 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREAN-EQFD 611 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH---HHHHCC-CCEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH---HHHhcC-CCcc
Confidence 35789999999999999999874 3468999999999999984 442 2 589999887544 444433 5799
Q ss_pred EEEEcC
Q psy2380 316 GILFDL 321 (733)
Q Consensus 316 gil~DL 321 (733)
.|++|-
T Consensus 612 ~Ii~DP 617 (703)
T 3v97_A 612 LIFIDP 617 (703)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999874
No 248
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.21 E-value=0.44 Score=50.12 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=52.4
Q ss_pred HHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCcc
Q psy2380 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFT 300 (733)
Q Consensus 231 Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~ 300 (733)
++++.+.. .+...++|.-.|.|..+..++++. |+.+++++|. |++++.|+ ++. .+|++++..+|.
T Consensus 160 ~~~~~~~~---~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 229 (332)
T 3i53_A 160 GIAAKYDW---AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF 229 (332)
T ss_dssp TGGGSSCC---GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHhCCC---CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC
Confidence 44444443 456899999999999999999997 7789999999 99999984 442 478999998874
No 249
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=91.18 E-value=0.42 Score=50.20 Aligned_cols=76 Identities=20% Similarity=0.293 Sum_probs=59.3
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
.++++.+.. .+ ..++|.-.|.|..+..++++. |+.+++++|. +++++.|+ ++. .+|++++.+++.+ .
T Consensus 158 ~~~~~~~~~---~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~- 229 (334)
T 2ip2_A 158 HEIPRLLDF---RG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E- 229 (334)
T ss_dssp HHHHHHSCC---TT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C-
T ss_pred HHHHHhCCC---CC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C-
Confidence 445555543 45 899999999999999999997 7789999999 99999984 442 4789999998865 1
Q ss_pred HHHhCCCCcccEEE
Q psy2380 305 ILKKYNIKKIDGIL 318 (733)
Q Consensus 305 ~l~~~~~~~~dgil 318 (733)
+. .++|.|+
T Consensus 230 -~~----~~~D~v~ 238 (334)
T 2ip2_A 230 -VP----SNGDIYL 238 (334)
T ss_dssp -CC----SSCSEEE
T ss_pred -CC----CCCCEEE
Confidence 11 3588888
No 250
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=91.10 E-value=0.51 Score=50.51 Aligned_cols=71 Identities=10% Similarity=0.139 Sum_probs=54.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+.+.++|.-.|.|..+..++++. |+.+++++|. |++++.|+ ++. .+|++++.++|.+.+. ... +++|.|
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~p-~~~D~v 252 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV---PFP-TGFDAV 252 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC---CCC-CCCSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC---CCC-CCcCEE
Confidence 46799999999999999999996 7889999999 99999984 443 2589999998865310 001 257777
Q ss_pred EE
Q psy2380 318 LF 319 (733)
Q Consensus 318 l~ 319 (733)
++
T Consensus 253 ~~ 254 (363)
T 3dp7_A 253 WM 254 (363)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 251
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=90.92 E-value=0.51 Score=52.80 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=58.9
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDI 304 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~ 304 (733)
+++++.+.. .++..++|.-.|.|..+..+++. +..+|+|+|.++ +++.|+ +.. .+|++++++++.++.
T Consensus 148 ~~il~~l~~---~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~- 220 (480)
T 3b3j_A 148 RAILQNHTD---FKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS- 220 (480)
T ss_dssp HHHHHTGGG---TTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-
T ss_pred HHHHHhhhh---cCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-
Confidence 445555544 56789999999999999988874 567999999998 777774 332 378999999987652
Q ss_pred HHHhCCCCcccEEEEc
Q psy2380 305 ILKKYNIKKIDGILFD 320 (733)
Q Consensus 305 ~l~~~~~~~~dgil~D 320 (733)
++ +++|.|+.+
T Consensus 221 -~~----~~fD~Ivs~ 231 (480)
T 3b3j_A 221 -LP----EQVDIIISE 231 (480)
T ss_dssp -CS----SCEEEEECC
T ss_pred -cC----CCeEEEEEe
Confidence 11 368888764
No 252
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=90.91 E-value=0.51 Score=45.66 Aligned_cols=66 Identities=9% Similarity=0.154 Sum_probs=51.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+++.++|.-.|.|..+..+ ...+++|+|.++++++.++ +. +++.+++++..++. ..-+++|.|+..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~-----~~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA--PEATWVRAWGEALP-----FPGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC--TTSEEECCCTTSCC-----SCSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC--CCcEEEEcccccCC-----CCCCcEEEEEEc
Confidence 5789999999999988877 2238999999999999985 44 57888888877653 112468998865
No 253
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=90.51 E-value=0.55 Score=49.87 Aligned_cols=68 Identities=15% Similarity=0.217 Sum_probs=54.6
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccc
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTE 301 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~ 301 (733)
...+++.+.. +++..++|.-.|.|..+..++++. ++.+++++|. +++++.|+ ++. .+|++++++++.+
T Consensus 172 ~~~l~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 172 FDAPAAAYDW---TNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE 244 (360)
T ss_dssp THHHHHHSCC---TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHhCCC---ccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 3455666554 567899999999999999999986 7789999999 99999984 442 3589999998754
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=90.34 E-value=0.23 Score=54.92 Aligned_cols=86 Identities=17% Similarity=0.260 Sum_probs=61.7
Q ss_pred HHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcC------------CCcEEEEEeCCHHHHHHhc-cc--CC---CcE
Q psy2380 231 EAINWLNIENERINGIYIDATFGQGGHSCKILERLG------------KKGRLIAIDKDTESVSLGN-KI--TD---SRF 292 (733)
Q Consensus 231 Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~------------~~~~l~~~D~D~~a~~~a~-~l--~~---~r~ 292 (733)
-+++.+.+ +++..++|.++|.||....+.+.+. +..+++|+|+|+.+++.|+ ++ .+ ++.
T Consensus 162 ~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~ 238 (445)
T 2okc_A 162 AMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS 238 (445)
T ss_dssp HHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCC
Confidence 34445555 6677999999999999999988652 2367999999999999984 44 22 167
Q ss_pred EEEccCccchHHHHHhCCCCcccEEEEcCCCCc
Q psy2380 293 SIIHNCFTELDIILKKYNIKKIDGILFDLGISS 325 (733)
Q Consensus 293 ~~~~~~f~~~~~~l~~~~~~~~dgil~DLGvss 325 (733)
.+.++++-..+ ...++|.|+.|-=++.
T Consensus 239 ~i~~gD~l~~~------~~~~fD~Iv~NPPf~~ 265 (445)
T 2okc_A 239 PIVCEDSLEKE------PSTLVDVILANPPFGT 265 (445)
T ss_dssp SEEECCTTTSC------CSSCEEEEEECCCSSC
T ss_pred CEeeCCCCCCc------ccCCcCEEEECCCCCC
Confidence 78888764432 1137999999855543
No 255
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=90.30 E-value=0.26 Score=49.60 Aligned_cols=87 Identities=20% Similarity=0.095 Sum_probs=62.8
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhccc-C---CCcEEEEcc-CccchH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-T---DSRFSIIHN-CFTELD 303 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l-~---~~r~~~~~~-~f~~~~ 303 (733)
|.|+.+.... ++++.++|...+-||-|...+.+.+. .+|+|+|.-+.-.+.- ++ . .+-+++..+ .+..+.
T Consensus 67 L~ei~ek~~l---~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~~~ 141 (267)
T 3p8z_A 67 LQWFVERNMV---IPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFYLP 141 (267)
T ss_dssp HHHHHHTTSS---CCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGGCC
T ss_pred HHHHHHhcCC---CCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccCc-chhhhcCcCceEEEeccceeecC
Confidence 3566666643 78899999999999999977777544 4899999986544311 12 1 367888888 664332
Q ss_pred HHHHhCCCCcccEEEEcCCCCccc
Q psy2380 304 IILKKYNIKKIDGILFDLGISSNQ 327 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~DLGvss~q 327 (733)
. .++|.+|-|.|=||.-
T Consensus 142 ~-------~~~DtllcDIgeSs~~ 158 (267)
T 3p8z_A 142 P-------EKCDTLLCDIGESSPS 158 (267)
T ss_dssp C-------CCCSEEEECCCCCCSC
T ss_pred C-------ccccEEEEecCCCCCC
Confidence 2 3699999999998764
No 256
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=90.30 E-value=1 Score=47.81 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=56.5
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccC----CCcEEEEccCccchHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDII 305 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~----~~r~~~~~~~f~~~~~~ 305 (733)
.++++.+.. .++..++|.-.|.|..+..++++. |+.+++++|. ++.+. .++.. .+|++++.++|.+
T Consensus 174 ~~~~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~-~~~~~~~~~~~~v~~~~~d~~~---- 243 (348)
T 3lst_A 174 LILARAGDF---PATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA-RHRLDAPDVAGRWKVVEGDFLR---- 243 (348)
T ss_dssp HHHHHHSCC---CSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT-TCCCCCGGGTTSEEEEECCTTT----
T ss_pred HHHHHhCCc---cCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh-cccccccCCCCCeEEEecCCCC----
Confidence 455555544 567899999999999999999997 7889999999 55555 32221 5789999998841
Q ss_pred HHhCCCCcccEEEEc
Q psy2380 306 LKKYNIKKIDGILFD 320 (733)
Q Consensus 306 l~~~~~~~~dgil~D 320 (733)
.. +++|.|++-
T Consensus 244 --~~--p~~D~v~~~ 254 (348)
T 3lst_A 244 --EV--PHADVHVLK 254 (348)
T ss_dssp --CC--CCCSEEEEE
T ss_pred --CC--CCCcEEEEe
Confidence 11 157888753
No 257
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=90.27 E-value=0.37 Score=48.95 Aligned_cols=57 Identities=9% Similarity=0.001 Sum_probs=48.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCF 299 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f 299 (733)
.++..++|.-.|.|-=+.++++. ++..+|+|+|+|+.|++.|+ +++ .+|+++.+++-
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~ 81 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG 81 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred CCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch
Confidence 35789999999999999988876 57789999999999999994 442 46899998874
No 258
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=89.98 E-value=0.86 Score=45.92 Aligned_cols=66 Identities=17% Similarity=0.191 Sum_probs=48.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++.++|.-.|.|..+..+++. +.+++|+|.++++++.++ +.. ++ +++.+..++. ..-+++|.|+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-~~--~~~~d~~~~~-----~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-KN--VVEAKAEDLP-----FPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-SC--EEECCTTSCC-----SCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-CC--EEECcHHHCC-----CCCCCEEEEEE
Confidence 4679999999999999999876 468999999999999995 432 22 5566655542 11135777764
No 259
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=89.93 E-value=0.37 Score=50.40 Aligned_cols=41 Identities=24% Similarity=0.366 Sum_probs=36.0
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~ 285 (733)
++..++|.-+|.|+++..++.. ..++|+|+|.++++++.|+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~ 88 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGN 88 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHH
Confidence 4679999999999999987764 3579999999999999994
No 260
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=89.73 E-value=0.21 Score=58.57 Aligned_cols=76 Identities=9% Similarity=0.038 Sum_probs=56.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHc-----------------------------------------CCCcEEEEEeCCHHH
Q psy2380 242 RINGIYIDATFGQGGHSCKILERL-----------------------------------------GKKGRLIAIDKDTES 280 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~-----------------------------------------~~~~~l~~~D~D~~a 280 (733)
+++..++|-.+|.|+=..+.+... .++.+++|+|+|++|
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 567899999999999876665432 123689999999999
Q ss_pred HHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 281 VSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 281 ~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
++.|+ ++. ++++++.++++.++..- ..-+++|.|+.|
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~---~~~~~~d~Iv~N 310 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNP---LPKGPYGTVLSN 310 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCS---CTTCCCCEEEEC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccc---cccCCCCEEEeC
Confidence 99994 542 45799999998875311 111268999998
No 261
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=89.54 E-value=1.1 Score=48.14 Aligned_cols=67 Identities=12% Similarity=0.075 Sum_probs=52.7
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccc
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~ 301 (733)
..++++.+.. +.+...++|.-.|.|..+..++++. |+.+++++|. |++++.+++. +|++++.++|.+
T Consensus 191 ~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~~ 257 (368)
T 3reo_A 191 MKKILEMYNG--FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF--SGVEHLGGDMFD 257 (368)
T ss_dssp HHHHHTTCCT--TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC--TTEEEEECCTTT
T ss_pred HHHHHHhccc--ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc--CCCEEEecCCCC
Confidence 3455555541 1456899999999999999999997 7899999999 9999888542 578888887653
No 262
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=89.46 E-value=0.45 Score=46.36 Aligned_cols=77 Identities=16% Similarity=0.279 Sum_probs=52.1
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHh
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKK 308 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~ 308 (733)
.++++.+. .++..++|.-.|.|..+..+++. + .+++|+|.++++++.++ +.. .+++.++.+...-
T Consensus 23 ~~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~~----~~~~~d~~~~~~~--- 88 (230)
T 3cc8_A 23 PNLLKHIK----KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKLD----HVVLGDIETMDMP--- 88 (230)
T ss_dssp HHHHTTCC----TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTSS----EEEESCTTTCCCC---
T ss_pred HHHHHHhc----cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhCC----cEEEcchhhcCCC---
Confidence 44455443 35789999999999999999987 3 79999999999999984 331 4455554432110
Q ss_pred CCCCcccEEEEc
Q psy2380 309 YNIKKIDGILFD 320 (733)
Q Consensus 309 ~~~~~~dgil~D 320 (733)
..-+++|.|+..
T Consensus 89 ~~~~~fD~v~~~ 100 (230)
T 3cc8_A 89 YEEEQFDCVIFG 100 (230)
T ss_dssp SCTTCEEEEEEE
T ss_pred CCCCccCEEEEC
Confidence 111357777654
No 263
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=89.25 E-value=1.2 Score=47.63 Aligned_cols=66 Identities=11% Similarity=0.071 Sum_probs=52.1
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccc
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTE 301 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~ 301 (733)
.++++.+.. +++...++|.-.|.|..+..++++. |+.+++++|. |++++.|++. +|++++.++|.+
T Consensus 190 ~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~D~~~ 255 (364)
T 3p9c_A 190 KKLLELYHG--FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF--PGVTHVGGDMFK 255 (364)
T ss_dssp HHHHHHCCT--TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC--TTEEEEECCTTT
T ss_pred HHHHHhccc--ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc--CCeEEEeCCcCC
Confidence 445555541 1457899999999999999999997 7889999999 9999888542 578888887754
No 264
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=88.98 E-value=0.62 Score=47.91 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=61.8
Q ss_pred CCCHHHHHHHHHhHcCC--------CcEEeCCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCC------------
Q psy2380 640 IITIKDLFHHITRKIGK--------KPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEIS------------ 699 (733)
Q Consensus 640 ~~s~~el~~~lk~~l~~--------~~v~~~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~------------ 699 (733)
.|+..|+.+.+.+.+.. ..+.+|+.++.|+||++|-=...+.+++|.++|||++||=.--
T Consensus 2 ~M~~~ei~~~le~~~p~~~a~~~D~~GL~vG~~~~~V~~I~~alD~t~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~ 81 (267)
T 2fyw_A 2 AMLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLASR 81 (267)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTS
T ss_pred CccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccccCc
Confidence 36778899988887653 2466777678999999999999999999999999999983211
Q ss_pred --hhHHHHHHHCCCeEEEeCChhh
Q psy2380 700 --ESTVYISRESGVAYFAAGHHAT 721 (733)
Q Consensus 700 --~h~~~~A~~~g~~li~~gH~~s 721 (733)
..-...+.++|++++.. |.+-
T Consensus 82 ~~~~~i~~li~~~I~lya~-Ht~l 104 (267)
T 2fyw_A 82 PQNQIYIDLIKHDIAVYVS-HTNI 104 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEC-SHHH
T ss_pred hHHHHHHHHHHCCCeEEEe-eccc
Confidence 11255678999999876 7543
No 265
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=88.93 E-value=0.46 Score=49.74 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=55.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
++..++|.-.|.|..+..++++. |+.+++++|.+ ++++.|+ ++. .+|++++++++.+.. .. +.+|.|
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-~~~D~v 236 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-----YG-NDYDLV 236 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-----CC-SCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-----CC-CCCcEE
Confidence 56799999999999999999997 77899999999 9999984 442 358999999886541 11 247888
Q ss_pred EE
Q psy2380 318 LF 319 (733)
Q Consensus 318 l~ 319 (733)
++
T Consensus 237 ~~ 238 (335)
T 2r3s_A 237 LL 238 (335)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 266
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=87.94 E-value=0.33 Score=50.43 Aligned_cols=87 Identities=16% Similarity=0.076 Sum_probs=59.9
Q ss_pred HHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh---cccCCCcEEEEcc-CccchHH
Q psy2380 229 LNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG---NKITDSRFSIIHN-CFTELDI 304 (733)
Q Consensus 229 l~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a---~~l~~~r~~~~~~-~f~~~~~ 304 (733)
|.|+.+.... ++++.++|...+-||=|...+.+.+. .+|+|+|+-..-.+.= +.+..+-++++.. ++..+..
T Consensus 83 L~ei~~~~~l---~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~ 158 (321)
T 3lkz_A 83 LRWLVERRFL---EPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS 158 (321)
T ss_dssp HHHHHHTTSC---CCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC
T ss_pred HHHHHHhcCC---CCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC
Confidence 3555555443 78899999999999999977766544 4899999986532211 1222244777777 7655543
Q ss_pred HHHhCCCCcccEEEEcCCCCcc
Q psy2380 305 ILKKYNIKKIDGILFDLGISSN 326 (733)
Q Consensus 305 ~l~~~~~~~~dgil~DLGvss~ 326 (733)
.++|.|+.|+|=||.
T Consensus 159 -------~~~D~ivcDigeSs~ 173 (321)
T 3lkz_A 159 -------ECCDTLLCDIGESSS 173 (321)
T ss_dssp -------CCCSEEEECCCCCCS
T ss_pred -------CCCCEEEEECccCCC
Confidence 369999999996653
No 267
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=87.39 E-value=1.9 Score=46.11 Aligned_cols=67 Identities=12% Similarity=0.119 Sum_probs=53.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
.++..++|.-.|.|..+..++++. |+.+++++|. +++++.|++. ++++++.++|.+ . .+.+|.|++.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~~-~-------~~~~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL--SGIEHVGGDMFA-S-------VPQGDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC--TTEEEEECCTTT-C-------CCCEEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc--CCCEEEeCCccc-C-------CCCCCEEEEe
Confidence 456899999999999999999997 7789999999 9999988654 468888888754 1 1236777763
No 268
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=87.05 E-value=1.5 Score=47.06 Aligned_cols=73 Identities=18% Similarity=0.278 Sum_probs=55.5
Q ss_pred CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-------C----CcEEEEccCccchHHHHHhC--
Q psy2380 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-------D----SRFSIIHNCFTELDIILKKY-- 309 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-------~----~r~~~~~~~f~~~~~~l~~~-- 309 (733)
+..++|.=.|.|+-+.+++++. + .+|.++|+|+++++.|+ .+. + +|++++++.-.+ ++++.
T Consensus 189 pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~---~L~~~~~ 263 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP---VLKRYAK 263 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH---HHHHHHH
T ss_pred CCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHH---HHHhhhc
Confidence 5789999999999999999873 5 79999999999999994 442 1 278888775333 34321
Q ss_pred CCCcccEEEEcC
Q psy2380 310 NIKKIDGILFDL 321 (733)
Q Consensus 310 ~~~~~dgil~DL 321 (733)
.-+++|.|+.|.
T Consensus 264 ~~~~fDvII~D~ 275 (364)
T 2qfm_A 264 EGREFDYVINDL 275 (364)
T ss_dssp HTCCEEEEEEEC
T ss_pred cCCCceEEEECC
Confidence 114799999996
No 269
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=87.02 E-value=0.56 Score=46.97 Aligned_cols=45 Identities=11% Similarity=-0.090 Sum_probs=37.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT 288 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~ 288 (733)
.++..++|.-.|.|.++..+++.. . .+++|+|.++++++.++ ++.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHh
Confidence 456799999999999999888653 3 58999999999999984 453
No 270
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=86.51 E-value=1 Score=47.77 Aligned_cols=55 Identities=16% Similarity=0.097 Sum_probs=46.7
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCcc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFT 300 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~ 300 (733)
.++..++|.-.|.|..+..++++. |+.+++++|. +++++.|++. ++++++.+++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~ 241 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS--NNLTYVGGDMF 241 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB--TTEEEEECCTT
T ss_pred ccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC--CCcEEEecccc
Confidence 456799999999999999999997 7789999999 9999988654 35888887764
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=86.41 E-value=1.5 Score=49.84 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=60.6
Q ss_pred HhhhhcccccCCCEEEEEccCCChhHHHHHHHcCC-----------------CcEEEEEeCCHHHHHHhc-cc--CC-C-
Q psy2380 233 INWLNIENERINGIYIDATFGQGGHSCKILERLGK-----------------KGRLIAIDKDTESVSLGN-KI--TD-S- 290 (733)
Q Consensus 233 l~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~-----------------~~~l~~~D~D~~a~~~a~-~l--~~-~- 290 (733)
++.+.+ +++..++|-++|.||=.....+.+.. ...++|+|+|+.+++.|+ ++ .+ +
T Consensus 162 v~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~ 238 (541)
T 2ar0_A 162 IHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEG 238 (541)
T ss_dssp HHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCC
T ss_pred HHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCc
Confidence 344455 66779999999999998888876532 237999999999999994 44 22 2
Q ss_pred ----cEEEEccCccchHHHHHhCCCCcccEEEEcCCCCcc
Q psy2380 291 ----RFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSN 326 (733)
Q Consensus 291 ----r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGvss~ 326 (733)
++.+.+++.-..+. . ...++|.|+.|-=++..
T Consensus 239 ~~~~~~~I~~gDtL~~~~--~--~~~~fD~Vv~NPPf~~~ 274 (541)
T 2ar0_A 239 NLDHGGAIRLGNTLGSDG--E--NLPKAHIVATNPPFGSA 274 (541)
T ss_dssp BGGGTBSEEESCTTSHHH--H--TSCCEEEEEECCCCTTC
T ss_pred cccccCCeEeCCCccccc--c--cccCCeEEEECCCcccc
Confidence 26778877543321 1 12479999998655543
No 272
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=85.57 E-value=1.6 Score=42.67 Aligned_cols=68 Identities=12% Similarity=0.025 Sum_probs=49.2
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+.+.++|.-+|.|-=+..+.... |+.+++|+|+|+.+++.++ ++. +.++++ .+...... -.++|.|
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~-----~d~~~~~~---~~~~DvV 119 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF-----LNKESDVY---KGTYDVV 119 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE-----ECCHHHHT---TSEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE-----ecccccCC---CCCcChh
Confidence 46799999999999999988764 7889999999999999984 442 235655 23322221 1457877
Q ss_pred EE
Q psy2380 318 LF 319 (733)
Q Consensus 318 l~ 319 (733)
|.
T Consensus 120 La 121 (200)
T 3fzg_A 120 FL 121 (200)
T ss_dssp EE
T ss_pred hH
Confidence 65
No 273
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=84.63 E-value=1.5 Score=45.53 Aligned_cols=53 Identities=9% Similarity=0.193 Sum_probs=42.8
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-ccc
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKI 287 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l 287 (733)
+++++++... +++++++|.-.|.|--+.+.++. +.+++|+|.|+++++.| +|+
T Consensus 224 l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 224 LAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp HHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHH
Confidence 4556666654 47899999999999988887653 46999999999999998 465
No 274
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=82.85 E-value=1.5 Score=47.33 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=62.4
Q ss_pred CCCHHHHHHHHHhHcCC--------CcEEeCCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccC------------C
Q psy2380 640 IITIKDLFHHITRKIGK--------KPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI------------S 699 (733)
Q Consensus 640 ~~s~~el~~~lk~~l~~--------~~v~~~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~------------~ 699 (733)
++++.|+++.+.+.+.. ..+.+|+.++.|+||++|-=...+.+++|.++|||++||=.- .
T Consensus 4 ~m~~~eii~~le~~~P~~~ae~wDn~GL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~~ 83 (370)
T 2nyd_A 4 PMKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANG 83 (370)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCTTSBCCCEEEESSCCHHHHHHHHHHTCCEEEESSCSSCSCCSCCCSST
T ss_pred CcCHHHHHHHHHHhCCHhHcCCCCcCeEEeCCCcCccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcccCCccccCcCC
Confidence 57788999999887653 256777777899999999999999999999999999998211 1
Q ss_pred -hhHHHHHHHCCCeEEEeCChh
Q psy2380 700 -ESTVYISRESGVAYFAAGHHA 720 (733)
Q Consensus 700 -~h~~~~A~~~g~~li~~gH~~ 720 (733)
..-...+.++|+++..+ |.+
T Consensus 84 ~~r~i~~li~~~Ialya~-HTn 104 (370)
T 2nyd_A 84 YGLIIRKLIQHDINLIAM-HTN 104 (370)
T ss_dssp HHHHHHHHHHTTCEEEEC-CHH
T ss_pred HHHHHHHHHHCCCeEEEe-ech
Confidence 12256678999999876 754
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=82.78 E-value=1.8 Score=49.08 Aligned_cols=81 Identities=15% Similarity=0.121 Sum_probs=59.0
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcC--CCcEEEEEeCCHHHHHHhc-cc--C--C-CcEEEEccCccchHHHHHhCCCCc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLG--KKGRLIAIDKDTESVSLGN-KI--T--D-SRFSIIHNCFTELDIILKKYNIKK 313 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~--~~~~l~~~D~D~~a~~~a~-~l--~--~-~r~~~~~~~f~~~~~~l~~~~~~~ 313 (733)
+++..++|-++|.||=..+.++.+. ....++|+|+|+.+.+.|+ ++ . + +++.+.++++-..+ .......+
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d--~p~~~~~~ 297 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED--WPTQEPTN 297 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC--SCCSSCCC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc--cccccccc
Confidence 4678999999999999999988863 3579999999999999994 44 2 1 47888888754321 00012246
Q ss_pred ccEEEEcCCCC
Q psy2380 314 IDGILFDLGIS 324 (733)
Q Consensus 314 ~dgil~DLGvs 324 (733)
+|.|+.|==++
T Consensus 298 fD~IvaNPPf~ 308 (542)
T 3lkd_A 298 FDGVLMNPPYS 308 (542)
T ss_dssp BSEEEECCCTT
T ss_pred ccEEEecCCcC
Confidence 88888886555
No 276
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=82.11 E-value=3.1 Score=44.45 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=61.9
Q ss_pred HhhhhhHHHHHhhhhcccccC------CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEE
Q psy2380 223 IMGFLFLNEAINWLNIENERI------NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSII 295 (733)
Q Consensus 223 ll~pvll~Evl~~L~~~~~~~------~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~ 295 (733)
+..+-..+.+++.+.. ++ +..+|++==|-|..|++||++.. ..+|+++++|+.-+..-+ .+..+|++++
T Consensus 35 L~d~~i~~~Iv~~~~l---~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~~~~~l~ii 110 (353)
T 1i4w_A 35 LWNPTVYNKIFDKLDL---TKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKFEGSPLQIL 110 (353)
T ss_dssp BCCHHHHHHHHHHHCG---GGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHTTTSSCEEE
T ss_pred cCCHHHHHHHHHhccC---CcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhccCCCEEEE
Confidence 3456667788888765 43 58999999999999999999753 368999999999887754 3345789999
Q ss_pred ccCccchHHH
Q psy2380 296 HNCFTELDII 305 (733)
Q Consensus 296 ~~~f~~~~~~ 305 (733)
++.+-+++.+
T Consensus 111 ~~D~l~~~~~ 120 (353)
T 1i4w_A 111 KRDPYDWSTY 120 (353)
T ss_dssp CSCTTCHHHH
T ss_pred ECCccchhhH
Confidence 9999776643
No 277
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=81.91 E-value=2.4 Score=45.81 Aligned_cols=52 Identities=8% Similarity=0.020 Sum_probs=43.0
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~ 285 (733)
+.+++++.+.. +++..++|.-.|.|..+..+.++ +.+++|+|.++++++.|+
T Consensus 95 ~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~ 146 (416)
T 4e2x_A 95 LARDFLATELT---GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAR 146 (416)
T ss_dssp HHHHHHHTTTC---SSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHhCC---CCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHH
Confidence 34455666665 67889999999999999999976 358999999999999984
No 278
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=81.09 E-value=2 Score=46.62 Aligned_cols=80 Identities=19% Similarity=0.235 Sum_probs=62.0
Q ss_pred CCCHHHHHHHHHhHcCC--------CcEEeCCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccC-------------
Q psy2380 640 IITIKDLFHHITRKIGK--------KPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEI------------- 698 (733)
Q Consensus 640 ~~s~~el~~~lk~~l~~--------~~v~~~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~------------- 698 (733)
.+++.|+++.+.+.+.. ..+.+|+.++.|+||++|-=...+.+++|.++|||++||=.-
T Consensus 28 ~m~~~eii~~le~~aP~~lae~wDnvGL~vG~~~~~V~~Vl~alD~t~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~ 107 (397)
T 2gx8_A 28 IPNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 107 (397)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred cccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCccccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccCcCc
Confidence 36688999999887643 256777777899999999999999999999999999998211
Q ss_pred -ChhHHHHHHHCCCeEEEeCChh
Q psy2380 699 -SESTVYISRESGVAYFAAGHHA 720 (733)
Q Consensus 699 -~~h~~~~A~~~g~~li~~gH~~ 720 (733)
+..-...+.++|+++..+ |.+
T Consensus 108 ~~~r~i~~li~~~Iavya~-HTn 129 (397)
T 2gx8_A 108 AYGKIIEKCIKNDIAIYAA-HTN 129 (397)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CHH
T ss_pred HHHHHHHHHHHCCCeEEEe-ech
Confidence 112256788999998876 754
No 279
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=80.97 E-value=2.7 Score=42.53 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=58.2
Q ss_pred CHHHHHHHHHhHcCC--------CcEEeCCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCC-------------h
Q psy2380 642 TIKDLFHHITRKIGK--------KPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEIS-------------E 700 (733)
Q Consensus 642 s~~el~~~lk~~l~~--------~~v~~~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~-------------~ 700 (733)
+..|+.+.+.+.+.. ..+.+ +.++.|+||++|-=...+.+++|.++|||++||=.-- +
T Consensus 2 ~~~ei~~~le~~~p~~~~~~~d~~GL~v-~~~~~V~~I~~~lD~t~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~~~ 80 (247)
T 1nmo_A 2 KNTELEQLINEKLNSAAISDYAPNGLQV-EGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKR 80 (247)
T ss_dssp BHHHHHHHHHHHTTCTTSCCSSCCEEEE-CCCSBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTSCCCCCTHHH
T ss_pred cHHHHHHHHHHhCChhhhCCcCCCeeEE-CCCCccCEEEEEEcCCHHHHHHHHhCCCCEEEECCchhccCCCccccchHH
Confidence 467888888887652 23455 4568899999999999999999999999999983221 1
Q ss_pred hHHHHHHHCCCeEEEeCChhh
Q psy2380 701 STVYISRESGVAYFAAGHHAT 721 (733)
Q Consensus 701 h~~~~A~~~g~~li~~gH~~s 721 (733)
.-...+.++|++++.. |.+-
T Consensus 81 ~~i~~li~~~I~ly~~-Htnl 100 (247)
T 1nmo_A 81 NRLKTLLANDINLYGW-HLPL 100 (247)
T ss_dssp HHHHHHHHTTCEEEEC-CHHH
T ss_pred HHHHHHHHCCCEEEEe-eech
Confidence 1255678999999876 7553
No 280
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=80.71 E-value=1.1 Score=46.71 Aligned_cols=62 Identities=19% Similarity=0.115 Sum_probs=45.8
Q ss_pred cCCCEEEEEccCC------ChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEE-EccCccchHHHHHhCCCCcc
Q psy2380 242 RINGIYIDATFGQ------GGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSI-IHNCFTELDIILKKYNIKKI 314 (733)
Q Consensus 242 ~~~~~~vD~T~G~------Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~-~~~~f~~~~~~l~~~~~~~~ 314 (733)
+++..++|.-.|. |+ ..+++..+++++|+|+|++++ + +++++ ++++..++.- . +++
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v--~~v~~~i~gD~~~~~~--~----~~f 124 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------V--SDADSTLIGDCATVHT--A----NKW 124 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------B--CSSSEEEESCGGGCCC--S----SCE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------C--CCCEEEEECccccCCc--c----Ccc
Confidence 6788999999955 66 445666666899999999998 2 35777 8887765421 1 469
Q ss_pred cEEEEc
Q psy2380 315 DGILFD 320 (733)
Q Consensus 315 dgil~D 320 (733)
|.|+.|
T Consensus 125 D~Vvsn 130 (290)
T 2xyq_A 125 DLIISD 130 (290)
T ss_dssp EEEEEC
T ss_pred cEEEEc
Confidence 999988
No 281
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=80.64 E-value=1.9 Score=49.17 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=56.5
Q ss_pred CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcc-c-C-C-CcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK-I-T-D-SRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~-l-~-~-~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+..++|.=+|+|-.|..+.+. ++.|.|+|..+++++.|+. - + + -++.+.+++-+++.. ...-+++|.|+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~fD~v~- 139 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIA---ALEEGEFDLAI- 139 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHH---HCCTTSCSEEE-
T ss_pred CCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhh---hccCCCccEEE-
Confidence 468999999999999999975 5789999999999999853 2 2 2 368888887766533 22224789665
Q ss_pred cCCCCccccCC
Q psy2380 320 DLGISSNQINN 330 (733)
Q Consensus 320 DLGvss~q~~~ 330 (733)
.+++= .|+.|
T Consensus 140 ~~e~~-ehv~~ 149 (569)
T 4azs_A 140 GLSVF-HHIVH 149 (569)
T ss_dssp EESCH-HHHHH
T ss_pred ECcch-hcCCC
Confidence 45542 34443
No 282
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=80.27 E-value=4.6 Score=42.73 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=52.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+...++|.-.|.|..+.+++++. |+.+++++|. +.+++.++++ ++++++.++|.+ . .+.+|.|++-
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--~~v~~~~~d~~~-~-------~~~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN--ENLNFVGGDMFK-S-------IPSADAVLLK 258 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC--SSEEEEECCTTT-C-------CCCCSEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC--CCcEEEeCccCC-C-------CCCceEEEEc
Confidence 46799999999999999999997 7789999999 8888877554 458888887754 1 1247887764
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=79.51 E-value=1.9 Score=44.45 Aligned_cols=85 Identities=14% Similarity=0.076 Sum_probs=50.0
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhccc--CCCcEEEEccCccchHHHHH
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI--TDSRFSIIHNCFTELDIILK 307 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l--~~~r~~~~~~~f~~~~~~l~ 307 (733)
.|+.+... +++++.+||+.+|-||+|.-.+++. +-..++|+|.-.+....+... .+.++..++.+-. + .
T Consensus 80 ~ei~eK~~---Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~d-v----~ 150 (282)
T 3gcz_A 80 RWMEERGY---VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTD-V----F 150 (282)
T ss_dssp HHHHHTTS---CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-G----G
T ss_pred HHHHHhcC---CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcc-h----h
Confidence 34444443 3678899999999999999888664 456789999865422212110 1223333333211 1 1
Q ss_pred hCCCCcccEEEEcCCC
Q psy2380 308 KYNIKKIDGILFDLGI 323 (733)
Q Consensus 308 ~~~~~~~dgil~DLGv 323 (733)
.+.-.++|.||-|.+.
T Consensus 151 ~l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 151 NMEVIPGDTLLCDIGE 166 (282)
T ss_dssp GSCCCCCSEEEECCCC
T ss_pred hcCCCCcCEEEecCcc
Confidence 2222568888888765
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=79.44 E-value=2 Score=44.69 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=53.6
Q ss_pred CEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcc-c--------CCCcEEEEccC-ccchHHHHHhCCCCcc
Q psy2380 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK-I--------TDSRFSIIHNC-FTELDIILKKYNIKKI 314 (733)
Q Consensus 245 ~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~-l--------~~~r~~~~~~~-f~~~~~~l~~~~~~~~ 314 (733)
+.++=.=.|.||=.+++|+.. +..++..+|+|++.++.+++ | .++|++++.+. +.. +++. -+++
T Consensus 85 k~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~----l~~~-~~~y 158 (294)
T 3o4f_A 85 KHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF----VNQT-SQTF 158 (294)
T ss_dssp CEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT----TSCS-SCCE
T ss_pred CeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH----Hhhc-cccC
Confidence 455556778899999999874 66799999999999999853 3 15799987765 433 3332 2579
Q ss_pred cEEEEcC
Q psy2380 315 DGILFDL 321 (733)
Q Consensus 315 dgil~DL 321 (733)
|.|+.|+
T Consensus 159 DvIi~D~ 165 (294)
T 3o4f_A 159 DVIISDC 165 (294)
T ss_dssp EEEEESC
T ss_pred CEEEEeC
Confidence 9999996
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=77.58 E-value=3.3 Score=44.61 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=52.7
Q ss_pred CEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcc-cC-----------CCcEEEEccC-ccchHHHHHhCCC
Q psy2380 245 GIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNK-IT-----------DSRFSIIHNC-FTELDIILKKYNI 311 (733)
Q Consensus 245 ~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~-l~-----------~~r~~~~~~~-f~~~~~~l~~~~~ 311 (733)
+.++=.=.|.||=.+++|+. ++ .++..+|+||+.++.+++ +. ++|++++.+. +..+.+..++.
T Consensus 207 krVLIIGgGdG~~~revlkh-~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~-- 282 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG-- 282 (381)
T ss_dssp CEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT--
T ss_pred CeEEEECCCcHHHHHHHHhc-CC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc--
Confidence 44444668999999999986 34 799999999999999954 31 2468876553 55555544432
Q ss_pred CcccEEEEcC
Q psy2380 312 KKIDGILFDL 321 (733)
Q Consensus 312 ~~~dgil~DL 321 (733)
+++|.|+.|+
T Consensus 283 ~~yDvIIvDl 292 (381)
T 3c6k_A 283 REFDYVINDL 292 (381)
T ss_dssp CCEEEEEEEC
T ss_pred CceeEEEECC
Confidence 4799999996
No 286
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=77.55 E-value=5.1 Score=38.88 Aligned_cols=63 Identities=13% Similarity=0.186 Sum_probs=48.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
+++.++|.-.|.|..+..+++. +|+|.++++++.+++. ++++++++..++. ..-+++|.|+..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~---~~~~~~~d~~~~~-----~~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR---GVFVLKGTAENLP-----LKDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT---TCEEEECBTTBCC-----SCTTCEEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc---CCEEEEcccccCC-----CCCCCeeEEEEc
Confidence 4678999999999999887643 8999999999998542 6778888776643 112468888864
No 287
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=76.33 E-value=4.6 Score=41.25 Aligned_cols=92 Identities=12% Similarity=0.073 Sum_probs=56.6
Q ss_pred cCCCEEEEEccCCChhHHHHHHHc---CCCcEE--EEEeCCHHHHHHhc-ccCC----Cc--EEEEccCccchHHHHH-h
Q psy2380 242 RINGIYIDATFGQGGHSCKILERL---GKKGRL--IAIDKDTESVSLGN-KITD----SR--FSIIHNCFTELDIILK-K 308 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~---~~~~~l--~~~D~D~~a~~~a~-~l~~----~r--~~~~~~~f~~~~~~l~-~ 308 (733)
+++..++|.-.|.|.-|..+|+.+ .++.++ +|+|.++++++.|+ ++.. ++ +.+.+....++..-.. .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 456799999999998777666543 156655 99999999999984 4421 23 3444444333221110 0
Q ss_pred CCCCcccEEEEcCCCCccccCCCCCCc
Q psy2380 309 YNIKKIDGILFDLGISSNQINNELRGF 335 (733)
Q Consensus 309 ~~~~~~dgil~DLGvss~q~~~~~rGf 335 (733)
..-+++|.|+.-. +-++++|+++.+
T Consensus 131 ~~~~~fD~V~~~~--~l~~~~d~~~~l 155 (292)
T 2aot_A 131 KELQKWDFIHMIQ--MLYYVKDIPATL 155 (292)
T ss_dssp TCCCCEEEEEEES--CGGGCSCHHHHH
T ss_pred cCCCceeEEEEee--eeeecCCHHHHH
Confidence 1124799998654 445667665443
No 288
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=75.59 E-value=4.3 Score=39.85 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC------CCcEEEEccCcc---------------
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT------DSRFSIIHNCFT--------------- 300 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~------~~r~~~~~~~f~--------------- 300 (733)
+...+++. |.| .|...+.+. ++++|+++|.|++-.+.|+ .++ .+|++++++.=.
T Consensus 30 ~a~~VLEi--GtG-ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEY--GSG-GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEE--SCS-HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEE--Cch-HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 35678774 554 577766665 4899999999999999984 442 358999987632
Q ss_pred chHHHHHh---C-CCCcccEEEEcC
Q psy2380 301 ELDIILKK---Y-NIKKIDGILFDL 321 (733)
Q Consensus 301 ~~~~~l~~---~-~~~~~dgil~DL 321 (733)
.+.++... . +..++|.|++|=
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg 130 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDG 130 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECS
T ss_pred hHHHHhhhhhccccCCCCCEEEEeC
Confidence 24444421 2 235789999984
No 289
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=75.44 E-value=3.5 Score=41.76 Aligned_cols=54 Identities=19% Similarity=0.265 Sum_probs=41.3
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT 288 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~ 288 (733)
+++.+++... +++++++|.-.|.|-=+.+-+ ++ +.+.+|+|+|+++++.| +|++
T Consensus 201 l~~~~i~~~~----~~~~~vlD~f~GsGtt~~~a~-~~--gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 201 LIERIIRASS----NPNDLVLDCFMGSGTTAIVAK-KL--GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHHHHC----CTTCEEEESSCTTCHHHHHHH-HT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHH-Hc--CCeEEEEeCCHHHHHHHHHHHH
Confidence 5566666654 478999999999886555554 33 57999999999999998 4664
No 290
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=72.71 E-value=5.8 Score=42.72 Aligned_cols=70 Identities=16% Similarity=0.266 Sum_probs=51.5
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhccc-C----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-T----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l-~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
+|++++|.=.|.|--|...++. +. .+|+|+|.++ ..+.|++. + +++++++++.-.+++ ++ +++|.|
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-GA-~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--lp----e~~Dvi 153 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-GA-RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--LP----EQVDAI 153 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--CS----SCEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CC-CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--CC----ccccEE
Confidence 5789999999999998766654 33 5899999996 55666432 1 578999999887763 11 478888
Q ss_pred EEcC
Q psy2380 318 LFDL 321 (733)
Q Consensus 318 l~DL 321 (733)
+-++
T Consensus 154 vsE~ 157 (376)
T 4hc4_A 154 VSEW 157 (376)
T ss_dssp ECCC
T ss_pred Eeec
Confidence 7543
No 291
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=71.96 E-value=2.8 Score=42.76 Aligned_cols=43 Identities=9% Similarity=-0.157 Sum_probs=33.6
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI 287 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l 287 (733)
++..++|.-.|.|.++ .++... +..+|+|+|.++++++.|+ ++
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~-~~~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACS-HFEDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGG-GCSEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhcc-CCCeEEEeCCCHHHHHHHHHHH
Confidence 5789999999999944 444332 4569999999999999984 44
No 292
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=70.48 E-value=5.1 Score=43.55 Aligned_cols=43 Identities=16% Similarity=0.137 Sum_probs=37.6
Q ss_pred cCCCEEEEEccCCChhHHHHHH-HcCCCcEEEEEeCCHHHHHHh
Q psy2380 242 RINGIYIDATFGQGGHSCKILE-RLGKKGRLIAIDKDTESVSLG 284 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~-~~~~~~~l~~~D~D~~a~~~a 284 (733)
+++++++|+=.+-|-+|..+++ ..++.++|++|+-+|++.+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L 268 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTL 268 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHH
Confidence 6789999999999999999984 444448999999999999986
No 293
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=69.84 E-value=3.9 Score=41.30 Aligned_cols=77 Identities=16% Similarity=0.258 Sum_probs=56.2
Q ss_pred CHHHHHHHHHhHcCC---------CcEEe-CCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEEccCC------------
Q psy2380 642 TIKDLFHHITRKIGK---------KPIVI-GDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYISGEIS------------ 699 (733)
Q Consensus 642 s~~el~~~lk~~l~~---------~~v~~-~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ITGd~~------------ 699 (733)
+..|+.+.+.+.+.. ..+.+ |+ +.|+||++|-=...+.+++|.++|||++||=.--
T Consensus 2 ~~~ei~~~le~~~p~~~~~~~~d~~GL~veG~--~~V~~I~~alD~t~~vi~eAi~~~adlIitHHp~~f~~~~~~~~~~ 79 (242)
T 2yyb_A 2 DRDELVRYLDAYLRIQDFPQDPSLNGLQVEGK--RTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHH 79 (242)
T ss_dssp BHHHHHHHHHHHTTGGGCTTCSSCCEEEECCC--SBCCCEEEEEECSHHHHHHHHHTTCSEEEEEECSCSSCCCCSCHHH
T ss_pred cHHHHHHHHHHhCCHhhhccCCCCCeEEEcCC--cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcCcCcccccccHH
Confidence 456777777766542 23555 43 7899999999999999999999999999983221
Q ss_pred hhHHHHHHHCCCeEEEeCChhh
Q psy2380 700 ESTVYISRESGVAYFAAGHHAT 721 (733)
Q Consensus 700 ~h~~~~A~~~g~~li~~gH~~s 721 (733)
..-...+.++|+++... |.+-
T Consensus 80 ~~~i~~li~~~I~ly~~-Ht~l 100 (242)
T 2yyb_A 80 KRRLETLFQGGINLYAA-HLPL 100 (242)
T ss_dssp HHHHHHHHHTTCEEEEC-SHHH
T ss_pred HHHHHHHHHCCCeEEEe-ccHH
Confidence 12255678999999876 7654
No 294
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=68.93 E-value=11 Score=38.49 Aligned_cols=54 Identities=9% Similarity=0.038 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHhHcCCC------cEEeCCCCCceeEEEEeeCCchhHHHHhhhCCCcEEEE
Q psy2380 640 IITIKDLFHHITRKIGKK------PIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAYIS 695 (733)
Q Consensus 640 ~~s~~el~~~lk~~l~~~------~v~~~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~IT 695 (733)
.+|.+|+.+.+.+.-++. .+.+ .++.|+||.++-=...+.+.+|.+.|||++||
T Consensus 6 ~m~~~~I~~~~~e~aplae~~dd~Gllv--~~~eV~kIlvaLD~t~~vv~eA~~~g~dlIIt 65 (278)
T 3rxy_A 6 GLSTAELVDIALEMAEMRTLPADSAVYV--ESTDLKRVMMGIDIGPAELLLARQLGCDGVIA 65 (278)
T ss_dssp CBCHHHHHHHHHHHTTCSSCCTTCEEEE--CCSCBSEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred cCcHHHHHHHHHHhcCcccCCCCceeee--ccccccEEEEEECCCHHHHHHHHHcCCCEEEE
Confidence 578889888888777642 3444 56889999999999999999999999999999
No 295
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=67.98 E-value=2.4 Score=42.88 Aligned_cols=42 Identities=10% Similarity=-0.152 Sum_probs=34.5
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN 285 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~ 285 (733)
.++..++|.-+|.|.|+...+.. .-.+|+|+|.++.+++.|+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~ 95 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELE 95 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHH
Confidence 46779999999999998776543 1247999999999999984
No 296
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=67.29 E-value=1.4e+02 Score=33.31 Aligned_cols=65 Identities=11% Similarity=0.233 Sum_probs=51.2
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 252 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 252 ~G~Gghs~~il~~~~~-~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+|.|--...+++.+.. +..++.+|.|++.++.++. ...+..+.++-.+ .+.|++.|+.+.|.++.
T Consensus 133 ~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~--~~~~~~i~Gd~~~-~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 133 FGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEE--QEGFKVVYGSPTD-AHVLAGLRVAAARSIIA 198 (565)
T ss_dssp ESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHH--SCSSEEEESCTTC-HHHHHHTTGGGCSEEEE
T ss_pred ECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--hcCCeEEEeCCCC-HHHHHhcCcccCCEEEE
Confidence 5788888888888743 5689999999999887632 1157888888877 45688889999999998
No 297
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=66.97 E-value=5.8 Score=40.75 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=29.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE 279 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~ 279 (733)
++++.+||..+|.||+|.-.+++. +-.++.|+|+-.+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvD 109 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRD 109 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEecc
Confidence 678899999999999999888764 3456777777543
No 298
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=65.32 E-value=6 Score=40.20 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=31.3
Q ss_pred cCCCEEEEEccCCChhHHHHHHHc------CCC-----cEEEEEeCCH
Q psy2380 242 RINGIYIDATFGQGGHSCKILERL------GKK-----GRLIAIDKDT 278 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~------~~~-----~~l~~~D~D~ 278 (733)
++...++|.-||.|-.+.++++.. .|+ .+++++|++|
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 345799999999999999998865 564 5999999998
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=65.20 E-value=3.9 Score=42.26 Aligned_cols=87 Identities=14% Similarity=0.078 Sum_probs=62.1
Q ss_pred hhhHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC-CCcEEEEccC-ccch
Q psy2380 226 FLFLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT-DSRFSIIHNC-FTEL 302 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~-~~r~~~~~~~-f~~~ 302 (733)
|..++..++.++. -+++.++|.=.|.|.=..+.|+ +..+++.+|.++++++.- ++++ .+|+++++.+ |+.+
T Consensus 77 p~~l~~yf~~l~~---~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L 150 (283)
T 2oo3_A 77 PSLFLEYISVIKQ---INLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKL 150 (283)
T ss_dssp CGGGHHHHHHHHH---HSSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHH
T ss_pred cHHHHHHHHHHHH---hcCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHH
Confidence 5556677777765 2345679999999998888776 347999999999999986 4665 5689999887 5545
Q ss_pred HHHHHhCCCCcccEEEEc
Q psy2380 303 DIILKKYNIKKIDGILFD 320 (733)
Q Consensus 303 ~~~l~~~~~~~~dgil~D 320 (733)
...++. + .++|.|++|
T Consensus 151 ~~l~~~-~-~~fdLVfiD 166 (283)
T 2oo3_A 151 NALLPP-P-EKRGLIFID 166 (283)
T ss_dssp HHHCSC-T-TSCEEEEEC
T ss_pred HHhcCC-C-CCccEEEEC
Confidence 444332 1 357777765
No 300
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=64.82 E-value=2.5 Score=48.00 Aligned_cols=86 Identities=14% Similarity=0.099 Sum_probs=53.7
Q ss_pred HHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCC--------------CcEEEEEeCCHHHHHHhc-cc--C--CCcE
Q psy2380 232 AINWLNIENERINGIYIDATFGQGGHSCKILERLGK--------------KGRLIAIDKDTESVSLGN-KI--T--DSRF 292 (733)
Q Consensus 232 vl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~--------------~~~l~~~D~D~~a~~~a~-~l--~--~~r~ 292 (733)
+++.+.+ ++ +.++|-++|.||=..+.++.+.. ...++|+|+|+.+.+.|+ ++ . +.++
T Consensus 237 mv~ll~p---~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i 312 (544)
T 3khk_A 237 IVEMLEP---YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNF 312 (544)
T ss_dssp HHHHHCC---CS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBC
T ss_pred HHHHHhc---CC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCccc
Confidence 3344455 44 48999999999977776554310 468999999999999994 44 2 2333
Q ss_pred EEEccCccchHHHHHhCCCCcccEEEEcCCCCc
Q psy2380 293 SIIHNCFTELDIILKKYNIKKIDGILFDLGISS 325 (733)
Q Consensus 293 ~~~~~~f~~~~~~l~~~~~~~~dgil~DLGvss 325 (733)
.+.+++.-.-+ ...-.++|.|+.|-=++.
T Consensus 313 ~i~~gDtL~~~----~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 313 GKKNADSFLDD----QHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp CSSSCCTTTSC----SCTTCCEEEEEECCCSSC
T ss_pred ceeccchhcCc----ccccccccEEEECCCcCC
Confidence 33555432111 011146888888765543
No 301
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=62.48 E-value=7.3 Score=46.05 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=55.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcC--CCcEEEEEeCCHHHHHHhc-cc--C------C-CcEEEEccCccchHHHHHhCC
Q psy2380 243 INGIYIDATFGQGGHSCKILERLG--KKGRLIAIDKDTESVSLGN-KI--T------D-SRFSIIHNCFTELDIILKKYN 310 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~--~~~~l~~~D~D~~a~~~a~-~l--~------~-~r~~~~~~~f~~~~~~l~~~~ 310 (733)
++..++|-++|.|+=..++.+.++ ...+++|+|+|+.+++.|+ |+ . + +...+..++|.+... ..
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~----~~ 396 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP----ED 396 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG----GG
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc----cc
Confidence 577999999999999999998774 2468999999999999882 22 1 1 123555666654321 11
Q ss_pred CCcccEEEEcCCCC
Q psy2380 311 IKKIDGILFDLGIS 324 (733)
Q Consensus 311 ~~~~dgil~DLGvs 324 (733)
..++|.|+.|-=|+
T Consensus 397 ~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 397 FANVSVVVMNPPYV 410 (878)
T ss_dssp GTTEEEEEECCBCC
T ss_pred cCCCCEEEECCCcc
Confidence 24689999887776
No 302
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=60.36 E-value=5.8 Score=40.20 Aligned_cols=36 Identities=6% Similarity=-0.048 Sum_probs=27.4
Q ss_pred HHHHHHHHhccccCCeEEEEeccchh-----hhHHHHHHHh
Q psy2380 439 SIALKIGFKKLNIKGRIVVISFHSLE-----DRIVKNFINF 474 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~visfhSlE-----dr~vk~~~~~ 474 (733)
++++..+..+|||||++++++|...+ |+++.++..+
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLYHG 155 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 46788899999999999999986543 4556665544
No 303
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=59.86 E-value=22 Score=36.52 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=53.9
Q ss_pred CCCEEEEEccCCChhHHHHHHHcC----CCcEEEEEeCCHH--------------------------HHHHh-cccC---
Q psy2380 243 INGIYIDATFGQGGHSCKILERLG----KKGRLIAIDKDTE--------------------------SVSLG-NKIT--- 288 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~----~~~~l~~~D~D~~--------------------------a~~~a-~~l~--- 288 (733)
..|.++.+=...|+-+..+.+.+. ++++|++||..+. .++.+ ++++
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 357999999999998888766553 4789999995310 12223 2222
Q ss_pred --CCcEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 289 --DSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 289 --~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
.++++++.+.|.+ .|++....++|.|.+|...
T Consensus 186 l~~~~I~li~Gda~e---tL~~~~~~~~d~vfIDaD~ 219 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKD---TLPTAPIDTLAVLRMDGDL 219 (282)
T ss_dssp CCSTTEEEEESCHHH---HSTTCCCCCEEEEEECCCS
T ss_pred CCcCceEEEEeCHHH---HHhhCCCCCEEEEEEcCCc
Confidence 3789999999965 3444333579999999753
No 304
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=59.27 E-value=9.6 Score=42.92 Aligned_cols=88 Identities=14% Similarity=0.198 Sum_probs=55.5
Q ss_pred HHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCC------------CcEEEEEeCCHHHHHHhc-cc--C-CCcEEEE
Q psy2380 232 AINWLNIENERINGIYIDATFGQGGHSCKILERLGK------------KGRLIAIDKDTESVSLGN-KI--T-DSRFSII 295 (733)
Q Consensus 232 vl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~------------~~~l~~~D~D~~a~~~a~-~l--~-~~r~~~~ 295 (733)
+++.+.+ +++..++|-|+|.||=-.+..+.+.. +..++|+|.|+.+...|+ +| . .+...+.
T Consensus 209 mv~l~~p---~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~ 285 (530)
T 3ufb_A 209 MVEVMDP---QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRID 285 (530)
T ss_dssp HHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEE
T ss_pred HHHhhcc---CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccc
Confidence 3455566 67789999999999987766654422 346999999999999984 44 2 2334455
Q ss_pred ccCccchHHHHHhCC-CCcccEEEEcCCCC
Q psy2380 296 HNCFTELDIILKKYN-IKKIDGILFDLGIS 324 (733)
Q Consensus 296 ~~~f~~~~~~l~~~~-~~~~dgil~DLGvs 324 (733)
+++.-... +.+.+ ..++|.|+.|==++
T Consensus 286 ~~dtL~~~--~~~~~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 286 PENSLRFP--LREMGDKDRVDVILTNPPFG 313 (530)
T ss_dssp CSCTTCSC--GGGCCGGGCBSEEEECCCSS
T ss_pred ccccccCc--hhhhcccccceEEEecCCCC
Confidence 55432110 11111 13688888776554
No 305
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=58.92 E-value=10 Score=44.02 Aligned_cols=78 Identities=22% Similarity=0.214 Sum_probs=57.5
Q ss_pred CCEEEEEccCCChhHHHHHHHcC------------CCcEEEEEeCCHHHHHHhccc-C---CCcEEEEccCccchHHHHH
Q psy2380 244 NGIYIDATFGQGGHSCKILERLG------------KKGRLIAIDKDTESVSLGNKI-T---DSRFSIIHNCFTELDIILK 307 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~------------~~~~l~~~D~D~~a~~~a~~l-~---~~r~~~~~~~f~~~~~~l~ 307 (733)
+.+++|.=.|.|-=+.+.+.... ...+|||+|.++.|+...++. . +++++++++.-+++.--..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 45899999999999887665532 235999999999998765432 1 5789999999988864334
Q ss_pred hCCCCcccEEEEcC
Q psy2380 308 KYNIKKIDGILFDL 321 (733)
Q Consensus 308 ~~~~~~~dgil~DL 321 (733)
..+.+++|-|+=.+
T Consensus 490 ~~~~ekVDIIVSEl 503 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL 503 (745)
T ss_dssp HTTCCCCSEEEECC
T ss_pred cCCCCcccEEEEec
Confidence 44456888887543
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=57.19 E-value=12 Score=38.71 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=31.2
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHH
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTE 279 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~ 279 (733)
+++..+||...+-||.|.-++++. +-..|+|+|....
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIE 116 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCT
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccc
Confidence 568899999999999999999875 4457899998643
No 307
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=56.89 E-value=16 Score=32.79 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=48.3
Q ss_pred cCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 252 FGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 252 ~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
+|.|.=...+.+.+. .+..|+++|+|++.++.+++ ..+..+.++..+-+ .+++.++...|.++.-.+-
T Consensus 13 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 13 VGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAANEE-IMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHH-HHHHTTGGGCSEEEECCSC
T ss_pred ECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHH-HHHhcCcccCCEEEEECCC
Confidence 466655555555542 35689999999999887643 24677888777644 5677788889999987664
No 308
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=55.49 E-value=4.8 Score=41.02 Aligned_cols=73 Identities=18% Similarity=0.098 Sum_probs=48.4
Q ss_pred ccCCCEEEEEccCCChhHHHHHHH--cCC-CcEEEEEeC--CHHHHHHhccc-CCCc-EEEEcc-CccchHHHHHhCCCC
Q psy2380 241 ERINGIYIDATFGQGGHSCKILER--LGK-KGRLIAIDK--DTESVSLGNKI-TDSR-FSIIHN-CFTELDIILKKYNIK 312 (733)
Q Consensus 241 ~~~~~~~vD~T~G~Gghs~~il~~--~~~-~~~l~~~D~--D~~a~~~a~~l-~~~r-~~~~~~-~f~~~~~~l~~~~~~ 312 (733)
++|++.+||+=++-||=|....++ .++ .|+++|+|. +|- .-+ .+-+ +++.++ .|.+++ -.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~-----~~~~~Gv~~i~~~~G~Df~~~~-------~~ 138 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPM-----LMQSYGWNIVTMKSGVDVFYKP-------SE 138 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCC-----CCCSTTGGGEEEECSCCGGGSC-------CC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCC-----cccCCCceEEEeeccCCccCCC-------CC
Confidence 368999999999999999999987 533 577888883 211 000 0102 244546 776632 23
Q ss_pred cccEEEEcCCCCc
Q psy2380 313 KIDGILFDLGISS 325 (733)
Q Consensus 313 ~~dgil~DLGvss 325 (733)
++|.||-|.+-||
T Consensus 139 ~~DvVLSDMAPnS 151 (269)
T 2px2_A 139 ISDTLLCDIGESS 151 (269)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEeCCCCCC
Confidence 6899999987654
No 309
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=55.40 E-value=22 Score=31.65 Aligned_cols=67 Identities=15% Similarity=0.303 Sum_probs=45.5
Q ss_pred cCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 252 FGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 252 ~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
+|.|.-...+.+.+. .+.+|+++|+|++.++..+. ..+..+.++..+-+ .+++.++..+|.++.-.|
T Consensus 12 ~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~-~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 12 IGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---EGFDAVIADPTDES-FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEECCTTCHH-HHHHSCCTTCSEEEECCS
T ss_pred ECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---CCCcEEECCCCCHH-HHHhCCcccCCEEEEecC
Confidence 355655555555542 25689999999998877633 24667777777643 566677778999987554
No 310
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=55.20 E-value=29 Score=37.16 Aligned_cols=75 Identities=9% Similarity=0.108 Sum_probs=53.8
Q ss_pred ccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhccc-CCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 241 ERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKI-TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 241 ~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l-~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+++|..+||.-..-||=|..++++ +++|+|+|.-+-+ .++ ..+++++++.+..... ..-.++|-|+-
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~----~~l~~~~~V~~~~~d~~~~~-----~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA----QSLMDTGQVTWLREDGFKFR-----PTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC----HHHHTTTCEEEECSCTTTCC-----CCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC----hhhccCCCeEEEeCcccccc-----CCCCCcCEEEE
Confidence 367899999999999999999986 5899999974311 122 2468998887644321 11147999999
Q ss_pred cCCCCccc
Q psy2380 320 DLGISSNQ 327 (733)
Q Consensus 320 DLGvss~q 327 (733)
|.-....+
T Consensus 277 Dm~~~p~~ 284 (375)
T 4auk_A 277 DMVEKPAK 284 (375)
T ss_dssp CCSSCHHH
T ss_pred cCCCChHH
Confidence 88776544
No 311
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=55.02 E-value=28 Score=34.02 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=51.0
Q ss_pred cCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 252 FGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 252 ~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
+|.|.-...+.+.+...+.|+++|+|++.++..+ ..+..++++..+-+ .|++.++...|.++.=.+
T Consensus 15 ~G~G~~G~~la~~L~~~g~v~vid~~~~~~~~~~----~~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 15 CGWSESTLECLRELRGSEVFVLAEDENVRKKVLR----SGANFVHGDPTRVS-DLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCCHHHHHHHHHSTTSEEEEEESCGGGHHHHHH----TTCEEEESCTTCHH-HHHHTTCTTCSEEEECCS
T ss_pred ECCChHHHHHHHHHHhCCeEEEEECCHHHHHHHh----cCCeEEEcCCCCHH-HHHhcCcchhcEEEEcCC
Confidence 5778888889888866555999999999877654 34788888887754 577778888999997653
No 312
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=52.44 E-value=13 Score=37.99 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=32.7
Q ss_pred CCEEEEEccCCChhH--HH--HHHHcCC---CcEEEEEeCCHHHHHHhc
Q psy2380 244 NGIYIDATFGQGGHS--CK--ILERLGK---KGRLIAIDKDTESVSLGN 285 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs--~~--il~~~~~---~~~l~~~D~D~~a~~~a~ 285 (733)
+..+.|+-+|.|-.+ .+ +.+.++. +.+|+|.|+|+++++.|+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar 154 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKAR 154 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHH
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHH
Confidence 458999999999964 33 3455442 469999999999999994
No 313
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=52.41 E-value=13 Score=35.61 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=45.1
Q ss_pred HHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhC
Q psy2380 230 NEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY 309 (733)
Q Consensus 230 ~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~ 309 (733)
+++++.+.. ..++..++|.-.|.|..+..+ ..+++|+|.+++ ++.+++++..++. .
T Consensus 56 ~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l------~~~v~~~D~s~~-----------~~~~~~~d~~~~~-----~ 111 (215)
T 2zfu_A 56 DRIARDLRQ--RPASLVVADFGCGDCRLASSI------RNPVHCFDLASL-----------DPRVTVCDMAQVP-----L 111 (215)
T ss_dssp HHHHHHHHT--SCTTSCEEEETCTTCHHHHHC------CSCEEEEESSCS-----------STTEEESCTTSCS-----C
T ss_pred HHHHHHHhc--cCCCCeEEEECCcCCHHHHHh------hccEEEEeCCCC-----------CceEEEeccccCC-----C
Confidence 345555543 145689999999999988776 257999999977 3445555555432 1
Q ss_pred CCCcccEEEEcC
Q psy2380 310 NIKKIDGILFDL 321 (733)
Q Consensus 310 ~~~~~dgil~DL 321 (733)
.-+++|.|+...
T Consensus 112 ~~~~fD~v~~~~ 123 (215)
T 2zfu_A 112 EDESVDVAVFCL 123 (215)
T ss_dssp CTTCEEEEEEES
T ss_pred CCCCEeEEEEeh
Confidence 124688888643
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=51.75 E-value=68 Score=32.40 Aligned_cols=80 Identities=16% Similarity=0.186 Sum_probs=56.2
Q ss_pred CCEEEEEccCCChhHHHHHH---H---cCCCcEEEEEe-----CCH----------------------HHHHHh------
Q psy2380 244 NGIYIDATFGQGGHSCKILE---R---LGKKGRLIAID-----KDT----------------------ESVSLG------ 284 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~---~---~~~~~~l~~~D-----~D~----------------------~a~~~a------ 284 (733)
.|.++.|=.-.||.+..+.+ . .+++.+|++|| -++ +-++..
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 57999999999998888654 2 24679999999 221 111111
Q ss_pred -cccC--CCcEEEEccCccc-hHHHHHhCCCCcccEEEEcCCC
Q psy2380 285 -NKIT--DSRFSIIHNCFTE-LDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 285 -~~l~--~~r~~~~~~~f~~-~~~~l~~~~~~~~dgil~DLGv 323 (733)
+++. +++++++.++|.+ +.+++++....++|.+.+|.+.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~ 192 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL 192 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc
Confidence 1332 4799999999987 5666665544579999999875
No 315
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=51.32 E-value=20 Score=37.38 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=51.7
Q ss_pred cCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 252 FGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 252 ~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
+|.|.-...+++.+...+.++.+|+|++.++ .++ ..+..++++-.+- +.|++.++++.|.++.-.+
T Consensus 121 ~G~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~---~~~~~i~gd~~~~-~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 121 CGWSESTLECLRELRGSEVFVLAEDENVRKK-VLR---SGANFVHGDPTRV-SDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp ESCCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH---TTCEEEESCTTSH-HHHHHTCSTTEEEEEECCS
T ss_pred ECCcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh---CCcEEEEeCCCCH-HHHHhcChhhccEEEEcCC
Confidence 5778888889988755555999999999887 532 4578899988774 4577788899999998653
No 316
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=50.58 E-value=24 Score=36.75 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=40.5
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT 288 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~ 288 (733)
+++.+++... ++|++++|.-.|.|-=. .-..++ +.+.+|+|+++.+.+.| +|+.
T Consensus 241 l~~~~i~~~~----~~~~~VlDpF~GsGtt~-~aa~~~--gr~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 241 LPEFFIRMLT----EPDDLVVDIFGGSNTTG-LVAERE--SRKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp HHHHHHHHHC----CTTCEEEETTCTTCHHH-HHHHHT--TCEEEEEESCHHHHHHHHGGGS
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHH-HHHHHc--CCCEEEEeCCHHHHHHHHHHHH
Confidence 5566666554 57999999988887533 334444 57999999999999999 5775
No 317
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=50.52 E-value=9.7 Score=38.55 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHHh
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF 474 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~~ 474 (733)
+.+.+|+.+.+.|||||++++......+|....+.+.+
T Consensus 156 ~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~ 193 (261)
T 4gek_A 156 ERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFN 193 (261)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHH
T ss_pred hHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHH
Confidence 45678999999999999999988888888776655543
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=49.76 E-value=41 Score=35.08 Aligned_cols=54 Identities=13% Similarity=0.096 Sum_probs=39.9
Q ss_pred hHHHHHhhhhcccccCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCH---HHHHHh-cccC
Q psy2380 228 FLNEAINWLNIENERINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDT---ESVSLG-NKIT 288 (733)
Q Consensus 228 ll~Evl~~L~~~~~~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~---~a~~~a-~~l~ 288 (733)
+++.+++... +++++++|.-.|.|-=..+-++ + +.+.+|+|+++ +..+.+ +|+.
T Consensus 231 l~~~~i~~~~----~~~~~vlDpF~GsGtt~~aa~~-~--~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 231 VIERLVRALS----HPGSTVLDFFAGSGVTARVAIQ-E--GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp HHHHHHHHHS----CTTCEEEETTCTTCHHHHHHHH-H--TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhC----CCCCEEEecCCCCCHHHHHHHH-c--CCcEEEEECCccHHHHHHHHHHHHH
Confidence 4556666554 5799999998888765555443 3 57899999999 999988 5774
No 319
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=49.39 E-value=9.3 Score=36.20 Aligned_cols=41 Identities=10% Similarity=-0.065 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHH
Q psy2380 433 QELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 473 (733)
Q Consensus 433 ~El~~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~ 473 (733)
+.++.++.+++.+.++|+|||+++++.+..-+..-+++.++
T Consensus 138 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~ 178 (215)
T 4dzr_A 138 DGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFA 178 (215)
T ss_dssp CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTG
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHH
Confidence 34556789999999999999997777665555555677776
No 320
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=49.27 E-value=12 Score=32.69 Aligned_cols=44 Identities=14% Similarity=0.324 Sum_probs=35.2
Q ss_pred eCCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCC
Q psy2380 675 TGAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 718 (733)
Q Consensus 675 ~GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH 718 (733)
.|.|....+....+|||++|+|.+.........+.|+.++....
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~~~ 91 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRNAFETLKAAGVKVYRFEG 91 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSSCHHHHHTTTCEEECCCS
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhHHHHHHHCCCEEEECCC
Confidence 45565666666788999999999998888888889999987543
No 321
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=48.27 E-value=9.7 Score=39.41 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHHhc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFN 475 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~~~ 475 (733)
-++.+++.+.++|||||++++..|++-+..-+.+.+++.
T Consensus 149 l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~ 187 (290)
T 2xyq_A 149 FFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHF 187 (290)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHc
Confidence 356889999999999999999888876665666666654
No 322
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=45.88 E-value=13 Score=37.76 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhccccCCeEEEEe--ccchhh-hHHHHHHHhc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVIS--FHSLED-RIVKNFINFN 475 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~vis--fhSlEd-r~vk~~~~~~ 475 (733)
..++.|+.+.++|||||++++.| +|.-|+ ..|++++++.
T Consensus 189 ~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 189 RQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 34678999999999999998854 555564 4667777654
No 323
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=45.59 E-value=24 Score=31.19 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=34.7
Q ss_pred CCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCC
Q psy2380 676 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 718 (733)
Q Consensus 676 GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH 718 (733)
|.|....+....+|||++|+|.+.........+.|+.++....
T Consensus 52 g~g~~~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~~~ 94 (124)
T 1eo1_A 52 GAGIRTAQIIANNGVKAVIASSPGPNAFEVLNELGIKIYRATG 94 (124)
T ss_dssp SCSTTHHHHHHHTTCCEEEECCSSHHHHHHHHHHTCEEEECCS
T ss_pred CCCHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCEEEEcCC
Confidence 4454666667789999999999999888888889999998543
No 324
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=45.43 E-value=16 Score=37.97 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=28.3
Q ss_pred HHHHHHHHhccccCCeEEEEe--ccchhhh-HHHHHHHhc
Q psy2380 439 SIALKIGFKKLNIKGRIVVIS--FHSLEDR-IVKNFINFN 475 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~vis--fhSlEdr-~vk~~~~~~ 475 (733)
+..|+.+.++|||||++++.| +|.-|+. .|++++++.
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~ 265 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNF 265 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcC
Confidence 688999999999999998754 5555654 567777653
No 325
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=45.27 E-value=19 Score=36.86 Aligned_cols=85 Identities=15% Similarity=0.073 Sum_probs=62.0
Q ss_pred CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC--CCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT--DSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~--~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
...++|.-+|.|==|..++.. .|..+++|+|+|+.+++.++ ++. +-++++.+..+.. ...-.++|.+|..
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~------~~p~~~~DvaL~l 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLE------DRLDEPADVTLLL 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTT------SCCCSCCSEEEET
T ss_pred CceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecc------cCCCCCcchHHHH
Confidence 468999999999999888875 48899999999999999984 443 4456665555432 2222578988865
Q ss_pred CCCCccccCCCCCCccc
Q psy2380 321 LGISSNQINNELRGFSF 337 (733)
Q Consensus 321 LGvss~q~~~~~rGfs~ 337 (733)
+ +-+.||+.+||=-|
T Consensus 206 k--ti~~Le~q~kg~g~ 220 (281)
T 3lcv_B 206 K--TLPCLETQQRGSGW 220 (281)
T ss_dssp T--CHHHHHHHSTTHHH
T ss_pred H--HHHHhhhhhhHHHH
Confidence 4 56777777776433
No 326
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=45.12 E-value=11 Score=35.66 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+..+.+|+.+.++|+|||+++++++..
T Consensus 135 ~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 135 VHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 5577899999999999999999999976
No 327
>2edu_A Kinesin-like protein KIF22; kinesin-like DNA binding domain, helix turn helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.2.7
Probab=43.70 E-value=3.1 Score=35.72 Aligned_cols=58 Identities=16% Similarity=0.273 Sum_probs=42.5
Q ss_pred CCCCccccCCCCCCCC----HHHHHhccCHHHHHHHHHHcCCCchHHHHHHHHHHHhcc-CCCCCHHHH
Q psy2380 339 LDGPLDMRMDITRGIS----ASKWLANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSI-TPITRTKQL 402 (733)
Q Consensus 339 ~~~pLDmRm~~~~~~~----a~~~~n~~~~~~l~~i~~~ygee~~~~~ia~~i~~~r~~-~~~~tt~~l 402 (733)
.|..++++||+..... ..--||+.+.++|..| .- -..+.|++|++.|+. +++.+..||
T Consensus 10 ~~~~~~l~~~pe~~~~~~~~~~i~iN~a~~~~L~~i-pG-----IG~~~A~~Il~~r~~~g~f~s~edL 72 (98)
T 2edu_A 10 AEDCWELQISPELLAHGRQKILDLLNEGSARDLRSL-QR-----IGPKKAQLIVGWRELHGPFSQVEDL 72 (98)
T ss_dssp CCSCSTTTSCHHHHHHHHHHHHHHHHHSCHHHHHHS-TT-----CCHHHHHHHHHHHHHHCCCSSGGGG
T ss_pred CCCcceeccCHHHHHHHHhccCeehhhCCHHHHHHC-CC-----CCHHHHHHHHHHHHhcCCcCCHHHH
Confidence 4777999998864221 2235899999999775 22 335789999999985 789888886
No 328
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=43.39 E-value=15 Score=32.29 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=34.2
Q ss_pred CCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCC
Q psy2380 676 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 718 (733)
Q Consensus 676 GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH 718 (733)
|.|....+...+.|||++|+|.+.........+.|+.++....
T Consensus 54 g~g~~~~~~l~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~~~ 96 (120)
T 2wfb_A 54 GAGINAAQVLAKSGAGVLLTGYVGPKAFQALQAAGIKVGQDLE 96 (120)
T ss_dssp CHHHHHHHHHHHHTEEEEECSCCCHHHHHHHHHTTCEEECCCT
T ss_pred CchHHHHHHHHHCCCCEEEECCCCHhHHHHHHHCCCEEEEcCC
Confidence 4444566666778999999999999988888899999998643
No 329
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=40.70 E-value=37 Score=30.70 Aligned_cols=69 Identities=14% Similarity=0.144 Sum_probs=46.0
Q ss_pred CCChhHHHHHHHcC-CCcEEEEEeCCH-HHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 253 GQGGHSCKILERLG-KKGRLIAIDKDT-ESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 253 G~Gghs~~il~~~~-~~~~l~~~D~D~-~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
|.|.=...+.+.+. .+..|..+|+|+ +..+..+......+.+++++..+-+ .+++.++...|.++.-.+
T Consensus 10 G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSS-VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHH-HHHHHTTTTCSEEEECSS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHH-HHHHcChhhCCEEEEecC
Confidence 66666666666553 245799999984 5443332111345788888888754 566667888999998775
No 330
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=39.84 E-value=22 Score=34.68 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHH
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 473 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~ 473 (733)
..+..|+.+.++|+|||+++++.+..-+...+.+...
T Consensus 141 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 177 (245)
T 3ggd_A 141 KRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLE 177 (245)
T ss_dssp GHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHh
Confidence 4578899999999999999999997766555554433
No 331
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=39.33 E-value=1.1e+02 Score=29.18 Aligned_cols=123 Identities=12% Similarity=-0.060 Sum_probs=67.4
Q ss_pred eCCHHHHHHHHHCCCCEEEeccCCCccCCcccccChHHHHHHHHHhcCCeEEE-ecCCCCCCCCCCHHHHHHH--HhccC
Q psy2380 537 TASLDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYA-YHLPLDMHPKLGNNAQLAK--ILNFS 613 (733)
Q Consensus 537 d~t~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~-~Ht~lD~~~~~G~n~~La~--~Lgl~ 613 (733)
|.....+++|.+.|+|.|+.|--. + .....+.++.+.++|+.+.. ++++.+ .-+.+-+ .+|..
T Consensus 64 ~~~~~~~~~~~~~Gad~v~v~~~~---~-----~~~~~~~~~~~~~~g~~~~v~~~~~~t------~~~~~~~~~~~g~d 129 (211)
T 3f4w_A 64 DGGHFESQLLFDAGADYVTVLGVT---D-----VLTIQSCIRAAKEAGKQVVVDMICVDD------LPARVRLLEEAGAD 129 (211)
T ss_dssp SCHHHHHHHHHHTTCSEEEEETTS---C-----HHHHHHHHHHHHHHTCEEEEECTTCSS------HHHHHHHHHHHTCC
T ss_pred cchHHHHHHHHhcCCCEEEEeCCC---C-----hhHHHHHHHHHHHcCCeEEEEecCCCC------HHHHHHHHHHcCCC
Confidence 333445999999999999998532 0 11235677778888988765 355432 1122222 22222
Q ss_pred ccccccccCccceeeeecccccccCCCCCHHHHHHHHHhHcCCCcEEeCCCCCceeEEEEeeCCchhHHHHhhhCCCcEE
Q psy2380 614 CTRRFSKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQNLLTDAINEGVTAY 693 (733)
Q Consensus 614 ~~~~~~~~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~~~~~~~v~rVai~~GsG~~~i~~a~~~g~D~~ 693 (733)
-.. .. .|.-|. . .+ +.+ .+.++.+++.++ + -.|.+.+|-..+-++++.+.|+|.+
T Consensus 130 ~i~-v~---~g~~g~-----~--~~-~~~-~~~i~~l~~~~~---------~---~~i~~~gGI~~~~~~~~~~~Gad~v 184 (211)
T 3f4w_A 130 MLA-VH---TGTDQQ-----A--AG-RKP-IDDLITMLKVRR---------K---ARIAVAGGISSQTVKDYALLGPDVV 184 (211)
T ss_dssp EEE-EE---CCHHHH-----H--TT-CCS-HHHHHHHHHHCS---------S---CEEEEESSCCTTTHHHHHTTCCSEE
T ss_pred EEE-Ec---CCCccc-----c--cC-CCC-HHHHHHHHHHcC---------C---CcEEEECCCCHHHHHHHHHcCCCEE
Confidence 110 00 111111 0 11 123 356667776652 1 1344455555566778888999999
Q ss_pred EEccC
Q psy2380 694 ISGEI 698 (733)
Q Consensus 694 ITGd~ 698 (733)
+.|-.
T Consensus 185 vvGsa 189 (211)
T 3f4w_A 185 IVGSA 189 (211)
T ss_dssp EECHH
T ss_pred EECHH
Confidence 99953
No 332
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=38.79 E-value=1.1e+02 Score=30.71 Aligned_cols=73 Identities=14% Similarity=0.151 Sum_probs=54.2
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccCCCcEEEEccCccchHH---HHHhCCCCcccEEEEcCCCC
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKITDSRFSIIHNCFTELDI---ILKKYNIKKIDGILFDLGIS 324 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~~~r~~~~~~~f~~~~~---~l~~~~~~~~dgil~DLGvs 324 (733)
.|=|.||=-.++.+++ ..+.+|+..||+++..+.+ +.+ ..++.++....++.++ .+++. .++|.++-+=|+.
T Consensus 21 VTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 21 ITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDLQDLSSVRRFADGV--SGADVLINNAGIM 97 (291)
T ss_dssp EECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEECCCCC
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEECCcCC
Confidence 5777777777777665 2467999999999988876 444 4678998888776554 44444 5799999999986
Q ss_pred c
Q psy2380 325 S 325 (733)
Q Consensus 325 s 325 (733)
.
T Consensus 98 ~ 98 (291)
T 3rd5_A 98 A 98 (291)
T ss_dssp S
T ss_pred C
Confidence 3
No 333
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=37.82 E-value=21 Score=33.67 Aligned_cols=30 Identities=10% Similarity=0.049 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccchh
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHSLE 464 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhSlE 464 (733)
.+..+..|+.+.++|+|||++++.+++.-.
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 356788999999999999999999887543
No 334
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=37.05 E-value=52 Score=33.21 Aligned_cols=80 Identities=11% Similarity=-0.081 Sum_probs=56.3
Q ss_pred CCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-cc--CCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 243 INGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KI--TDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 243 ~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l--~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+.+.++|.-.|.|==+.++. +..+++|+|+|+.+++.++ .+ .+.++.+....+..- . .-.++|.+|.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~-----~-~~~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCA-----P-PAEAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTS-----C-CCCBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccC-----C-CCCCcchHHH
Confidence 46799999998887777665 6789999999999999984 33 255677776665432 1 1136777765
Q ss_pred cCCCCccccCCCCCC
Q psy2380 320 DLGISSNQINNELRG 334 (733)
Q Consensus 320 DLGvss~q~~~~~rG 334 (733)
.+ .-+.|++.+||
T Consensus 175 lk--~lh~LE~q~~~ 187 (253)
T 3frh_A 175 FK--LLPLLEREQAG 187 (253)
T ss_dssp ES--CHHHHHHHSTT
T ss_pred HH--HHHHhhhhchh
Confidence 43 34677766666
No 335
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=36.93 E-value=15 Score=37.09 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=25.1
Q ss_pred HhhhHHHHHHHHHHHHhccccCCeEEEEe
Q psy2380 431 INQELKNLSIALKIGFKKLNIKGRIVVIS 459 (733)
Q Consensus 431 vN~El~~l~~~l~~~~~~l~~gg~l~vis 459 (733)
+..++.+++.+|+.+.++|||||++++..
T Consensus 187 ~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 187 VSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 44557789999999999999999999973
No 336
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=36.76 E-value=38 Score=29.71 Aligned_cols=37 Identities=11% Similarity=0.141 Sum_probs=31.4
Q ss_pred hHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEe
Q psy2380 680 NLLTDAINEGVTAYISGEISESTVYISRESGVAYFAA 716 (733)
Q Consensus 680 ~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~ 716 (733)
...+...++|||++|+|.+.........+.|+.++..
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~~a~~~L~~~GI~v~~~ 90 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGRRAIEYFNSLGISVVTG 90 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCHHHHHHHHHTTCEEECS
T ss_pred HHHHHHHHcCCCEEEECCCCHhHHHHHHHCCCEEEEC
Confidence 5566667789999999999998888888999999975
No 337
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=36.10 E-value=26 Score=31.75 Aligned_cols=42 Identities=14% Similarity=0.266 Sum_probs=31.5
Q ss_pred CCchhHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeCC
Q psy2380 676 GAAQNLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAGH 718 (733)
Q Consensus 676 GsG~~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~gH 718 (733)
|.|....+...+.|||++|+|.+.........+ |+.++...-
T Consensus 66 g~g~~~~~~L~~~gv~~VI~g~iG~~a~~~L~~-GI~v~~~~~ 107 (136)
T 2re2_A 66 ARGVFMLKSALDHGANALVLSEIGSPGFNFIKN-KMDVYIVPE 107 (136)
T ss_dssp CHHHHHHHHHHHTTCSEEEESCCBHHHHHHHTT-TSEEEECCS
T ss_pred CccHHHHHHHHHcCCCEEEECCCCHhHHHHHHC-CCEEEEcCC
Confidence 334356666677899999999998877766667 999888754
No 338
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=35.16 E-value=20 Score=34.31 Aligned_cols=25 Identities=4% Similarity=-0.185 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
..+..++.+.++|||||++.+++++
T Consensus 118 ~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 118 MRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp HHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 5677899999999999997777654
No 339
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=34.73 E-value=2.7e+02 Score=28.01 Aligned_cols=121 Identities=13% Similarity=0.066 Sum_probs=64.9
Q ss_pred HHHHHHHHHCCCCEEEeccCCCccCCcccccChHHHHHHHHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCcccccc
Q psy2380 540 LDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFS 619 (733)
Q Consensus 540 ~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~ 619 (733)
..-++++.+.|+|-+|.|- +-+ +...+....+.++|+.....=+|=. ..+.+.+......--.+.
T Consensus 113 e~f~~~~~~aGvdgvii~D-lp~--------ee~~~~~~~~~~~gl~~i~liaP~t------~~eri~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIAD-VPV--------EESAPFSKAAKAHGIAPIFIAPPNA------DADTLKMVSEQGEGYTYL 177 (267)
T ss_dssp HHHHHHHHHHTCCEEEETT-SCG--------GGCHHHHHHHHHTTCEEECEECTTC------CHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHcCCCEEEeCC-CCH--------hhHHHHHHHHHHcCCeEEEEECCCC------CHHHHHHHHHhCCCcEEE
Confidence 5678999999999999872 211 1235678888999987442222211 123344433322110111
Q ss_pred ccCccceeeeecccccccC-CCCCHHHHHHHHHhHcCCCcEEeCCCCCceeEEEEeeCCch---hHHHHhhhCCCcEEEE
Q psy2380 620 KNNIGWIGKIINLKRYNFK-KIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAAQ---NLLTDAINEGVTAYIS 695 (733)
Q Consensus 620 ~~~~G~ig~~~~~~~~~l~-~~~s~~el~~~lk~~l~~~~v~~~~~~~~v~rVai~~GsG~---~~i~~a~~~g~D~~IT 695 (733)
....|..|. -. -+..+.++++++++..+.+ ++.|.|- +-++.+...|||.+|.
T Consensus 178 vS~~GvTG~--------~~~~~~~~~~~v~~vr~~~~~p---------------v~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 178 LSRAGVTGT--------ESKAGEPIENILTQLAEFNAPP---------------PLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp SCCCCCC----------------CHHHHHHHHHTTTCCC---------------EEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred EecCCCCCC--------ccCCcHHHHHHHHHHHHhcCCC---------------EEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 112344443 11 1235778888887654221 3335552 4455567789999999
Q ss_pred ccC
Q psy2380 696 GEI 698 (733)
Q Consensus 696 Gd~ 698 (733)
|-.
T Consensus 235 GSa 237 (267)
T 3vnd_A 235 GSA 237 (267)
T ss_dssp CHH
T ss_pred CHH
Confidence 953
No 340
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.27 E-value=70 Score=35.08 Aligned_cols=87 Identities=14% Similarity=0.203 Sum_probs=63.9
Q ss_pred hhhHHHHHhhhhcccccC-CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccCCCcEEEEccCccchH
Q psy2380 226 FLFLNEAINWLNIENERI-NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKITDSRFSIIHNCFTELD 303 (733)
Q Consensus 226 pvll~Evl~~L~~~~~~~-~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~~~r~~~~~~~f~~~~ 303 (733)
+--++++.+.+.+.. ++ ..++| .|+|.=...+.+.+.++..+.-+|+|++-.+.. ++| ++...+|++-.+.+
T Consensus 218 ~~~i~~~~~~~g~~~-~~~~~v~I---~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l--~~~~Vi~GD~td~~ 291 (461)
T 4g65_A 218 SNHIRSVMSELQRLE-KPYRRIMI---VGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL--ENTIVFCGDAADQE 291 (461)
T ss_dssp TTTHHHHHHHTTGGG-SCCCEEEE---ECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC--TTSEEEESCTTCHH
T ss_pred cchHHHHHHhhcccc-ccccEEEE---EcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC--CCceEEeccccchh
Confidence 444556666665410 12 23443 677777788888888889999999999877774 666 46889999998854
Q ss_pred HHHHhCCCCcccEEEE
Q psy2380 304 IILKKYNIKKIDGILF 319 (733)
Q Consensus 304 ~~l~~~~~~~~dgil~ 319 (733)
+|++.|+...|.++.
T Consensus 292 -~L~ee~i~~~D~~ia 306 (461)
T 4g65_A 292 -LLTEENIDQVDVFIA 306 (461)
T ss_dssp -HHHHTTGGGCSEEEE
T ss_pred -hHhhcCchhhcEEEE
Confidence 788889999999886
No 341
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=33.81 E-value=20 Score=35.82 Aligned_cols=26 Identities=23% Similarity=0.079 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEec
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISF 460 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visf 460 (733)
++.+..+|.++.++|||||++++.+.
T Consensus 173 ~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 173 LDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 56788999999999999999998753
No 342
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=33.76 E-value=15 Score=36.96 Aligned_cols=25 Identities=12% Similarity=-0.008 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
..+..++.+.++|||||+++++|+.
T Consensus 169 ~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 169 DHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 3567899999999999999998876
No 343
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=33.66 E-value=1.7e+02 Score=29.09 Aligned_cols=131 Identities=14% Similarity=0.102 Sum_probs=71.0
Q ss_pred EEEEEEeCCHHHHHHHHHCCCCEEEeccCCCccCCcccccChHHHHHHHHHhc---------CCeE-E--EecCCCCCCC
Q psy2380 531 VIVTGVTASLDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIIN---------KINL-Y--AYHLPLDMHP 598 (733)
Q Consensus 531 ~I~~ald~t~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~~~~~~~~~~~l~~~---------~I~v-y--~~Ht~lD~~~ 598 (733)
.+-+-++--...++.+.+.|||.|..|=-. .+...+.++.+.++ |.-+ . .+||+.+...
T Consensus 73 DvhLMv~~p~~~i~~~~~aGAd~itvH~ea---------~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~ 143 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAVVANGANLVTLQLEQ---------YHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELE 143 (237)
T ss_dssp EEEEECSCHHHHHHHHHHTTCSEEEEETTC---------TTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGT
T ss_pred CeEEEEECHHHHHHHHHHcCCCEEEEecCC---------cccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHH
Confidence 334433433577999999999999999321 12245677777776 3322 2 4478877643
Q ss_pred CCCHHHHHHHHhccCccccc-c-ccCccceeeeecccccccCCCCCHHHHHHHHHhHcCCCcEEeCCCCCceeEEEEeeC
Q psy2380 599 KLGNNAQLAKILNFSCTRRF-S-KNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTG 676 (733)
Q Consensus 599 ~~G~n~~La~~Lgl~~~~~~-~-~~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~~~~~~~v~rVai~~G 676 (733)
+ . +..-++--+ . +.|+| |. -..+ +..+-++.+++..+.. +.. -.|.+-+|
T Consensus 144 ~--~-------l~~~D~vlvMsv~pgfg--gq--------~f~~-~~l~ki~~lr~~~~~~-------~~~-~~I~vdGG 195 (237)
T 3cu2_A 144 P--Y-------LDQIDVIQLLTLDPRNG--TK--------YPSE-LILDRVIQVEKRLGNR-------RVE-KLINIDGS 195 (237)
T ss_dssp T--T-------TTTCSEEEEESEETTTT--EE--------CCHH-HHHHHHHHHHHHHGGG-------GGG-CEEEEESS
T ss_pred H--H-------hhcCceeeeeeeccCcC--Ce--------ecCh-hHHHHHHHHHHHHHhc-------CCC-ceEEEECC
Confidence 2 1 110011000 0 11333 32 0111 2233334444444211 011 24778888
Q ss_pred CchhHHHHhhh--CCCcEEEEccC
Q psy2380 677 AAQNLLTDAIN--EGVTAYISGEI 698 (733)
Q Consensus 677 sG~~~i~~a~~--~g~D~~ITGd~ 698 (733)
-..+-++.+.+ .|||.++.|=-
T Consensus 196 I~~~~~~~~~~~~aGad~~VvGSa 219 (237)
T 3cu2_A 196 MTLELAKYFKQGTHQIDWLVSGSA 219 (237)
T ss_dssp CCHHHHHHHHHSSSCCCCEEECGG
T ss_pred cCHHHHHHHHHhCCCCcEEEEeeH
Confidence 88888889999 99999999944
No 344
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.03 E-value=48 Score=28.86 Aligned_cols=68 Identities=19% Similarity=0.229 Sum_probs=41.9
Q ss_pred cCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 252 FGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 252 ~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
+|.|+=...+.+.+. .+.+|+.+|+|++..+..++ .....+.++..+. +.+++.++..+|.++.-.|.
T Consensus 12 ~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~-~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 12 IGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEE-NELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp ECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---TCSEEEECCTTCH-HHHHTTTGGGCSEEEECCCS
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCH-HHHHhcCCCCCCEEEECCCC
Confidence 355555555555432 24579999999987765432 1234566666664 34555455679999987774
No 345
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=32.49 E-value=23 Score=34.83 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=25.0
Q ss_pred hhhHHHHHHHHHHHHhccccCCeEEEEec
Q psy2380 432 NQELKNLSIALKIGFKKLNIKGRIVVISF 460 (733)
Q Consensus 432 N~El~~l~~~l~~~~~~l~~gg~l~visf 460 (733)
..++...+.+|+.+.++|+|||++++...
T Consensus 171 ~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 171 CPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp CSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 34577899999999999999999999873
No 346
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=32.49 E-value=22 Score=33.90 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+.++.+|+.+.++|+|||++++.+.+.
T Consensus 130 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 130 MTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 4577889999999999999999987654
No 347
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=32.41 E-value=25 Score=34.70 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHH
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFIN 473 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~ 473 (733)
..+.+|+.+.++|+|||++++..+..-++.....++.
T Consensus 118 d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 154 (260)
T 1vl5_A 118 NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYN 154 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHH
Confidence 3468899999999999999998776655555544443
No 348
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=32.30 E-value=29 Score=36.32 Aligned_cols=40 Identities=15% Similarity=0.290 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccchh-hhHHHHHHHh
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHSLE-DRIVKNFINF 474 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhSlE-dr~vk~~~~~ 474 (733)
.+..+++++.+.++|+|||++++++...+. +...++.|..
T Consensus 279 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~ 319 (343)
T 2pjd_A 279 LDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF 319 (343)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc
Confidence 356889999999999999999998765543 3456666654
No 349
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=32.15 E-value=19 Score=37.16 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=29.0
Q ss_pred HHHHHHhccccCCeEEEEeccch---hhhHHHHHHHhc
Q psy2380 441 ALKIGFKKLNIKGRIVVISFHSL---EDRIVKNFINFN 475 (733)
Q Consensus 441 ~l~~~~~~l~~gg~l~visfhSl---Edr~vk~~~~~~ 475 (733)
++..|.++|+|||.+++..|+-- ++.+++..-|..
T Consensus 236 al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 89999999999999999999987 666666655544
No 350
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=32.08 E-value=40 Score=32.20 Aligned_cols=37 Identities=11% Similarity=0.031 Sum_probs=26.2
Q ss_pred HHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHHhc
Q psy2380 438 LSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFN 475 (733)
Q Consensus 438 l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~~~ 475 (733)
.+ .++.+.++|+|||++++.+..--.-.-+.+.+++.
T Consensus 134 ~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 134 QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 45 88999999999999988766533333455556654
No 351
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=31.75 E-value=49 Score=29.87 Aligned_cols=38 Identities=13% Similarity=0.111 Sum_probs=30.7
Q ss_pred hHHHHhhhCCCcEEEEccCChhHHHHHHHCCCeEEEeC
Q psy2380 680 NLLTDAINEGVTAYISGEISESTVYISRESGVAYFAAG 717 (733)
Q Consensus 680 ~~i~~a~~~g~D~~ITGd~~~h~~~~A~~~g~~li~~g 717 (733)
...+...++|||++|+|.+.........+.|+.++...
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~~a~~~L~~~GI~v~~~~ 104 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGRRAIAAFEAMGVKVIKGA 104 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCHHHHHHHHHTTCEEECSC
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCEEEecC
Confidence 55566667899999999998888888888899988754
No 352
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=30.91 E-value=34 Score=33.98 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHHh
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINF 474 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~~ 474 (733)
...++.+++.+.++|+|||+++++.-..-.+.+.+ .+++
T Consensus 152 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~l~~ 190 (259)
T 3lpm_A 152 MCTLEDTIRVAASLLKQGGKANFVHRPERLLDIID-IMRK 190 (259)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHH-HHHH
T ss_pred cCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHH-HHHH
Confidence 35678999999999999999999764443444433 3444
No 353
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=30.84 E-value=27 Score=35.44 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccchhhh
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHSLEDR 466 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhSlEdr 466 (733)
+.++.+++.+.++|+|||++++.++..-+++
T Consensus 160 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 190 (302)
T 3hem_A 160 ERYDTFFKKFYNLTPDDGRMLLHTITIPDKE 190 (302)
T ss_dssp THHHHHHHHHHHSSCTTCEEEEEEEECCCHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEEEeccCcc
Confidence 4678899999999999999999888655443
No 354
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=30.79 E-value=24 Score=33.77 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+....+|+.+.++|+|||++++.+++.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 118 KERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 345578999999999999999998865
No 355
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=30.25 E-value=34 Score=34.96 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 434 ELKNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 434 El~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.++.++.+|+.+.++|+|||++++.++.+
T Consensus 130 ~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 130 SYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 34677899999999999999999998887
No 356
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=30.10 E-value=90 Score=29.97 Aligned_cols=76 Identities=21% Similarity=0.226 Sum_probs=51.9
Q ss_pred EccCCChhHHHHHHHcCC-C--cEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHH---HHHhC----CCCcccEEEE
Q psy2380 250 ATFGQGGHSCKILERLGK-K--GRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI---ILKKY----NIKKIDGILF 319 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~~-~--~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~---~l~~~----~~~~~dgil~ 319 (733)
.|=|.||=-.++.+++.. + .+|+++||+++..+..+++...++.++..+..+-+. .+++. |-.++|.++.
T Consensus 8 ItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~ 87 (250)
T 1yo6_A 8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLIN 87 (250)
T ss_dssp ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEE
T ss_pred EecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 577778877777777643 3 699999999887665433334678888888876543 33321 1116899999
Q ss_pred cCCCCc
Q psy2380 320 DLGISS 325 (733)
Q Consensus 320 DLGvss 325 (733)
.-|+..
T Consensus 88 ~Ag~~~ 93 (250)
T 1yo6_A 88 NAGVLL 93 (250)
T ss_dssp CCCCCC
T ss_pred CCcccC
Confidence 988764
No 357
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=29.84 E-value=1.2e+02 Score=25.23 Aligned_cols=49 Identities=10% Similarity=0.024 Sum_probs=32.7
Q ss_pred cEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 269 GRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 269 ~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
.+|+++|++++..+..+ ...+..+..+..+.+.+-+.. ..+|.++.-.|
T Consensus 30 ~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~~~ 78 (118)
T 3ic5_A 30 YSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKAL--GGFDAVISAAP 78 (118)
T ss_dssp EEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHT--TTCSEEEECSC
T ss_pred ceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHH--cCCCEEEECCC
Confidence 68999999998777653 234666666776655444332 36898876654
No 358
>2i5h_A Hypothetical protein AF1531; PFAM:DUF655, PSI-2, structural genomics, protein structure initiative; 1.74A {Archaeoglobus fulgidus} SCOP: e.71.1.1
Probab=29.21 E-value=31 Score=33.61 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhccCCCCCHHHHHHHH
Q psy2380 381 KKIAKEIVHYRSITPITRTKQLVEII 406 (733)
Q Consensus 381 ~~ia~~i~~~r~~~~~~tt~~l~~~i 406 (733)
.+.|++|++.|+++||++..||.+-|
T Consensus 142 ~k~A~~IIeyRe~G~F~s~eDL~~RV 167 (205)
T 2i5h_A 142 KKMMWAIIEERKKRPFESFEDIAQRV 167 (205)
T ss_dssp HHHHHHHHHHHHHSCCCSHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHhc
Confidence 67899999999999999999997733
No 359
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=29.16 E-value=33 Score=35.57 Aligned_cols=28 Identities=7% Similarity=0.179 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccch
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHSL 463 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhSl 463 (733)
...+++++.+.+.|||||++++-..|.+
T Consensus 199 ~d~~~~l~el~r~LkPGG~Lvv~~~~~~ 226 (298)
T 3fpf_A 199 EPKRRVFRNIHRYVDTETRIIYRTYTGM 226 (298)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEEEECCGG
T ss_pred cCHHHHHHHHHHHcCCCcEEEEEcCcch
Confidence 3567899999999999999999876544
No 360
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=28.96 E-value=25 Score=33.35 Aligned_cols=26 Identities=4% Similarity=-0.011 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+..+|+.+.++|+|||++++.+++.
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 57889999999999999999998876
No 361
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=28.95 E-value=24 Score=35.77 Aligned_cols=25 Identities=16% Similarity=0.324 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
..+.+|+.+.++|||||+++++.++
T Consensus 150 d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 150 DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 4678899999999999999998654
No 362
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=28.89 E-value=24 Score=33.52 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+.+.+|+.+.++|+|||++++.++|.
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 45678999999999999999998874
No 363
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=28.68 E-value=47 Score=33.79 Aligned_cols=31 Identities=26% Similarity=0.380 Sum_probs=24.1
Q ss_pred eEEEEeeCCch----hHHHHhhhCCCcEEEEccCC
Q psy2380 669 YEIGWCTGAAQ----NLLTDAINEGVTAYISGEIS 699 (733)
Q Consensus 669 ~rVai~~GsG~----~~i~~a~~~g~D~~ITGd~~ 699 (733)
.|||++||+++ ...+...+.|+++++++--.
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~ 63 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK 63 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 38999999875 45666788999999997543
No 364
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=28.41 E-value=34 Score=37.77 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=28.7
Q ss_pred HHHHHHHHhccccCCeEEE--Eeccchhhh-HHHHHHHhc
Q psy2380 439 SIALKIGFKKLNIKGRIVV--ISFHSLEDR-IVKNFINFN 475 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~v--isfhSlEdr-~vk~~~~~~ 475 (733)
++.|+.+.++|||||+++. .|+|.-|+. .|+.+.++.
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 7789999999999999987 467777765 556665554
No 365
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=27.33 E-value=1.2e+02 Score=33.27 Aligned_cols=64 Identities=16% Similarity=0.244 Sum_probs=49.3
Q ss_pred cCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHh-cccCCCcEEEEccCccchHHHHHhCCCCcccEEEE
Q psy2380 252 FGQGGHSCKILERLGK-KGRLIAIDKDTESVSLG-NKITDSRFSIIHNCFTELDIILKKYNIKKIDGILF 319 (733)
Q Consensus 252 ~G~Gghs~~il~~~~~-~~~l~~~D~D~~a~~~a-~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~ 319 (733)
+|+|-=-..+.+.+.. +-.|..+|.|++.++.. +++ .+..++++=++. +.|++.|++..|.++.
T Consensus 9 ~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~-~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 9 LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHP-DVLHEAGAQDADMLVA 74 (461)
T ss_dssp ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCH-HHHHHHTTTTCSEEEE
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCH-HHHHhcCCCcCCEEEE
Confidence 5777666777887754 45799999999999876 455 367788887774 4678889999998876
No 366
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=27.10 E-value=45 Score=23.46 Aligned_cols=25 Identities=24% Similarity=0.305 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2380 131 HSGLALSIGLGACLHASFLYWYLRH 155 (733)
Q Consensus 131 i~GaalAt~is~~v~~iL~~~~l~r 155 (733)
+.|++++.+++..+.+.+.+++.||
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeeehHHHHHHHHHHHHHHHHeec
Confidence 5677777766666666655555544
No 367
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=26.64 E-value=38 Score=30.67 Aligned_cols=69 Identities=13% Similarity=0.030 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccC-CCcEEEE--ccCccchHHHHHhCCCCcccEEEEcCCCC
Q psy2380 253 GQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KIT-DSRFSII--HNCFTELDIILKKYNIKKIDGILFDLGIS 324 (733)
Q Consensus 253 G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~-~~r~~~~--~~~f~~~~~~l~~~~~~~~dgil~DLGvs 324 (733)
|.+||+...-.-.....+|+-+|-|+...+.-+ .|. ...+..+ -.+..+.-+.+++ ..+|.|++|+...
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~---~~~dlvilD~~l~ 82 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIE---LKPDVITMDIEMP 82 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHH---HCCSEEEECSSCS
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhcc---CCCCEEEEeCCCC
Confidence 567788777765445679999999998887754 343 2233333 3344444444544 3589999998653
No 368
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=26.52 E-value=28 Score=37.03 Aligned_cols=43 Identities=26% Similarity=0.325 Sum_probs=31.5
Q ss_pred hhHHHHH-HHHHHHHhccccCCeEE--EEeccchhhh-HHHHHHHhc
Q psy2380 433 QELKNLS-IALKIGFKKLNIKGRIV--VISFHSLEDR-IVKNFINFN 475 (733)
Q Consensus 433 ~El~~l~-~~l~~~~~~l~~gg~l~--visfhSlEdr-~vk~~~~~~ 475 (733)
.+|..++ +.|++|.++|||||+|+ .-|+|--|.. +|+.|.++.
T Consensus 257 ~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 257 QILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp HTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 3455553 57889999999999998 6678888876 455555543
No 369
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=26.49 E-value=32 Score=34.95 Aligned_cols=29 Identities=17% Similarity=0.183 Sum_probs=24.6
Q ss_pred HHhhhHHHHHHHHHHHHhccccCCeEEEE
Q psy2380 430 YINQELKNLSIALKIGFKKLNIKGRIVVI 458 (733)
Q Consensus 430 ~vN~El~~l~~~l~~~~~~l~~gg~l~vi 458 (733)
..|..-+.++++++.+.++|+|||++++-
T Consensus 191 hl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 191 HLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 44666668999999999999999999874
No 370
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=26.37 E-value=24 Score=33.27 Aligned_cols=26 Identities=19% Similarity=0.107 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+.+.+|+.+.++|+|||++++..+..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 56788999999999999999877543
No 371
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=26.29 E-value=30 Score=32.56 Aligned_cols=26 Identities=12% Similarity=0.032 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhccccCCeEEEEecc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
+..+.+++.+.++|+|||++++..+.
T Consensus 105 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 105 NDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 46788999999999999999876654
No 372
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=26.15 E-value=33 Score=32.73 Aligned_cols=27 Identities=15% Similarity=0.111 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+.+.+|+.+.++|+|||++++..++.
T Consensus 119 ~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 119 LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 467889999999999999999987753
No 373
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=25.73 E-value=17 Score=35.56 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccch
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHSL 463 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhSl 463 (733)
....+.+++.+.++|||||+++++.+.+.
T Consensus 146 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 174 (236)
T 1zx0_A 146 THQFNFIKNHAFRLLKPGGVLTYCNLTSW 174 (236)
T ss_dssp THHHHHHHHTHHHHEEEEEEEEECCHHHH
T ss_pred hhhHHHHHHHHHHhcCCCeEEEEEecCcH
Confidence 34557789999999999999999887654
No 374
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=25.73 E-value=34 Score=29.49 Aligned_cols=29 Identities=17% Similarity=0.323 Sum_probs=25.2
Q ss_pred HHHHhccCHHHHHHHHHHcCCCchHHHHH
Q psy2380 356 SKWLANATEFNIKKVIQDYGEERFAKKIA 384 (733)
Q Consensus 356 ~~~~n~~~~~~l~~i~~~ygee~~~~~ia 384 (733)
.+.|.+-+++...++..+||||.-||||+
T Consensus 66 D~~Lqk~D~~~R~qL~~KfG~enVAkRi~ 94 (111)
T 3k6g_A 66 DIDLQKDDEDTREALVKKFGAQNVARRIE 94 (111)
T ss_dssp HHHHTCCCHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHhhHHHHHHHH
Confidence 56788889999999999999998888875
No 375
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=25.66 E-value=30 Score=31.44 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=21.2
Q ss_pred HHHHHHHHHhccccCCeEEEEeccc
Q psy2380 438 LSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 438 l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+.+++.+.+.|+|||++++..+..
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 5688899999999999999986543
No 376
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=25.55 E-value=25 Score=34.11 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
.....++.+.++|+|||+++++.|.
T Consensus 149 ~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 149 MRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEec
Confidence 5678899999999999999998764
No 377
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=25.53 E-value=31 Score=34.92 Aligned_cols=27 Identities=11% Similarity=-0.039 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+.++.+|+.+.++|+|||++++-+++.
T Consensus 167 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 167 ADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 367889999999999999998877765
No 378
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=25.41 E-value=3.6e+02 Score=26.85 Aligned_cols=124 Identities=12% Similarity=0.123 Sum_probs=64.1
Q ss_pred HHHHHHHHHCCCCEEEeccCCCccCCcccccChHHHHHHHHHhcCCeEEEecCCCCCCCCCCHHHHHHHHhccCcccccc
Q psy2380 540 LDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKINLYAYHLPLDMHPKLGNNAQLAKILNFSCTRRFS 619 (733)
Q Consensus 540 ~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~~ 619 (733)
.+-++++.+.|+|-|+.|- +-. +...+.+..+.++|+.+...-++= .+ -+.+.+.......-.+-
T Consensus 112 ~~~~~~~~~aGadgii~~d-~~~--------e~~~~~~~~~~~~g~~~i~l~~p~--t~----~~~i~~i~~~~~g~v~~ 176 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVAD-VPV--------EESAPFRQAALRHNIAPIFICPPN--AD----DDLLRQVASYGRGYTYL 176 (268)
T ss_dssp HHHHHHHHHHTCCEEEETT-CCG--------GGCHHHHHHHHHTTCEEECEECTT--CC----HHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHcCCCEEEEcC-CCH--------HHHHHHHHHHHHcCCcEEEEECCC--CC----HHHHHHHHhhCCCcEEE
Confidence 5778899999999888862 211 123567788889997643322211 11 12222222111100000
Q ss_pred ccCccceeeeecccccccCCCCCHHHHHHHHHhHcCCCcEEeCCCCCceeEEEEeeCCc-hhHHHHhhhCCCcEEEEccC
Q psy2380 620 KNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA-QNLLTDAINEGVTAYISGEI 698 (733)
Q Consensus 620 ~~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~~~~~~~v~rVai~~GsG-~~~i~~a~~~g~D~~ITGd~ 698 (733)
....|..|. .-+.+.+..++++++++..+. .|++-+|-. .+-+.++...|||.+|.|--
T Consensus 177 ~s~~G~tG~-------~~~~~~~~~~~i~~lr~~~~~-------------pi~vggGI~t~e~~~~~~~agAD~vVVGSa 236 (268)
T 1qop_A 177 LSRSGVTGA-------ENRGALPLHHLIEKLKEYHAA-------------PALQGFGISSPEQVSAAVRAGAAGAISGSA 236 (268)
T ss_dssp ESSSSCCCS-------SSCC--CCHHHHHHHHHTTCC-------------CEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred EecCCcCCC-------ccCCCchHHHHHHHHHhccCC-------------cEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 011133332 001122456788888765421 244444443 45677777889999999954
No 379
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=25.13 E-value=2.1e+02 Score=27.26 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=52.2
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccC---CCcEEEEccCccchHHHHHhCC-----CCcccEEEE
Q psy2380 250 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKIT---DSRFSIIHNCFTELDIILKKYN-----IKKIDGILF 319 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~---~~r~~~~~~~f~~~~~~l~~~~-----~~~~dgil~ 319 (733)
.|=|.||=-+++.+++. .+.+|+..||+++..+.. +.+. +.++.++..+.++.+++-+-.. .+++|.++-
T Consensus 7 ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 86 (235)
T 3l77_A 7 ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVA 86 (235)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEE
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 46666766666666542 457899999999888775 3442 5689999888887665432221 137999999
Q ss_pred cCCCCc
Q psy2380 320 DLGISS 325 (733)
Q Consensus 320 DLGvss 325 (733)
+=|++.
T Consensus 87 ~Ag~~~ 92 (235)
T 3l77_A 87 NAGLGY 92 (235)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 888753
No 380
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=24.90 E-value=4.7e+02 Score=26.47 Aligned_cols=80 Identities=15% Similarity=0.084 Sum_probs=45.2
Q ss_pred cCCC-EEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchH-HHHHhCCCCcccEEEE
Q psy2380 242 RING-IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELD-IILKKYNIKKIDGILF 319 (733)
Q Consensus 242 ~~~~-~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~-~~l~~~~~~~~dgil~ 319 (733)
+++. +.|=+.-|.|+....++++. ...+|+++|.+++-++.++++-.+. .++.+=.+.. ++.+..+-..+|.++.
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~~~~Ga~~--~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLAKKIGADV--TINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHHHHTTCSE--EEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhhhhcCCeE--EEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 4554 55545433344445555554 4689999999999888887663222 2232223333 3333333346787777
Q ss_pred cCCCC
Q psy2380 320 DLGIS 324 (733)
Q Consensus 320 DLGvs 324 (733)
|-|-.
T Consensus 239 ~~~~~ 243 (348)
T 4eez_A 239 CAVAR 243 (348)
T ss_dssp CCSCH
T ss_pred eccCc
Confidence 76654
No 381
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=24.78 E-value=32 Score=33.71 Aligned_cols=27 Identities=15% Similarity=0.321 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.....+|+.+.++|+|||++++.++..
T Consensus 136 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 136 ENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 577899999999999999999988754
No 382
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=24.75 E-value=1.9e+02 Score=30.74 Aligned_cols=80 Identities=26% Similarity=0.285 Sum_probs=52.8
Q ss_pred EEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHH-HHHh--CCCCcccEEEEcC
Q psy2380 246 IYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDI-ILKK--YNIKKIDGILFDL 321 (733)
Q Consensus 246 ~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~-~l~~--~~~~~~dgil~DL 321 (733)
.++|.-.|.||=|..+.+. + --.++++|.|+.|.+..+ +.. ...++++.-.++.. .+.. .+...+|.++.+.
T Consensus 4 ~vidLFsG~GGlslG~~~a-G-~~~v~avE~d~~a~~t~~~N~~--~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARA-G-FDVKMAVEIDQHAINTHAINFP--RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp EEEEETCTTSHHHHHHHHH-T-CEEEEEECSCHHHHHHHHHHCT--TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred eEEEEccCcCHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHhCC--CCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 5899999999999999876 3 345789999999998764 442 35566666555421 2211 1234688888764
Q ss_pred CCCccccCCCCCCcccC
Q psy2380 322 GISSNQINNELRGFSFL 338 (733)
Q Consensus 322 Gvss~q~~~~~rGfs~~ 338 (733)
|=-|||-.
T Consensus 80 ---------PCQ~fS~a 87 (376)
T 3g7u_A 80 ---------PCQGFSSI 87 (376)
T ss_dssp ---------CCCTTC--
T ss_pred ---------CCCCcccc
Confidence 45566654
No 383
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=24.70 E-value=37 Score=32.97 Aligned_cols=25 Identities=24% Similarity=0.267 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
.++.+++.+.++|+|||++++.+..
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 5678899999999999999987765
No 384
>2duy_A Competence protein comea-related protein; helix-hairpin-helix, structural genomics, NPPSFA; 1.75A {Thermus thermophilus} SCOP: a.60.2.7
Probab=24.55 E-value=12 Score=30.14 Aligned_cols=37 Identities=27% Similarity=0.444 Sum_probs=27.3
Q ss_pred HhccCHHHHHHHHHHcCCCchHHHHHHHHHHHhccCCCCCHHHHHH
Q psy2380 359 LANATEFNIKKVIQDYGEERFAKKIAKEIVHYRSITPITRTKQLVE 404 (733)
Q Consensus 359 ~n~~~~~~l~~i~~~ygee~~~~~ia~~i~~~r~~~~~~tt~~l~~ 404 (733)
+|+.+.++|.+| . | -..+.|++|++.| ++.+..||.+
T Consensus 21 iN~a~~~~L~~i-p--G---IG~~~A~~Il~~r---~~~s~~eL~~ 57 (75)
T 2duy_A 21 LNEASLEELMAL-P--G---IGPVLARRIVEGR---PYARVEDLLK 57 (75)
T ss_dssp TTTCCHHHHTTS-T--T---CCHHHHHHHHHTC---CCSSGGGGGG
T ss_pred hhhCCHHHHHhC-C--C---CCHHHHHHHHHHc---ccCCHHHHHh
Confidence 577788888776 1 2 4467899999998 7788777764
No 385
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=24.38 E-value=33 Score=34.67 Aligned_cols=30 Identities=7% Similarity=0.025 Sum_probs=25.9
Q ss_pred HhhhHHHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 431 INQELKNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 431 vN~El~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+.+| +.+..|+.+.+.|+|||++++..+..
T Consensus 170 ~~d~--~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 170 LSPD--VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCTT--THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCcH--HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 4555 67889999999999999999998875
No 386
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=23.99 E-value=1.7e+02 Score=30.34 Aligned_cols=69 Identities=14% Similarity=0.126 Sum_probs=47.5
Q ss_pred CCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 244 NGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
+-.++|.=.|.||=+.++.+. + --.++++|+|+.|.+.-+ +..... ..++.++..+ .+..+|.++.+.=
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~-~~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEK-TIPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGG-GSCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHh-hCCCCCEEEECCC
Confidence 358999999999999999865 3 346899999999998863 443211 3444443222 2346888888753
No 387
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=23.88 E-value=1.6e+02 Score=27.38 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=50.5
Q ss_pred EccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccCCCcEEEEccCccchH---HHHHhCCCCcccEEEEcCCCCc
Q psy2380 250 ATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKITDSRFSIIHNCFTELD---IILKKYNIKKIDGILFDLGISS 325 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~~~r~~~~~~~f~~~~---~~l~~~~~~~~dgil~DLGvss 325 (733)
.|=|.||=-+++.+++-.. +|+++||+++..+.. +++. . .++..+..+.+ +.+++ ..++|+++..-|++.
T Consensus 5 VtGasg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 5 ITGATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG--A-RALPADLADELEAKALLEE--AGPLDLLVHAVGKAG 78 (207)
T ss_dssp EETTTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT--C-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCCCCC
T ss_pred EEcCCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc--C-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCcCC
Confidence 4667788888999988777 999999999877665 3342 2 66777766644 44444 247999999988763
No 388
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=23.82 E-value=33 Score=32.45 Aligned_cols=26 Identities=19% Similarity=0.176 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+.+..|+.+.++|+|||++++.+++.
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 45688999999999999999988764
No 389
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=23.79 E-value=5.1e+02 Score=26.02 Aligned_cols=119 Identities=14% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCCEEEeccCCCccCCcccccChHHHHHHHHHhcCCe-EEEecCCCCCCCCCCHHHHHHHHhccCccccc
Q psy2380 540 LDLIKTAVDMNADAILVHHGYFWKGENSNIVGIKKKRLEQLIINKIN-LYAYHLPLDMHPKLGNNAQLAKILNFSCTRRF 618 (733)
Q Consensus 540 ~~vi~~Ai~~~~dlIItHHP~~f~~~~~~~~~~~~~~~~~l~~~~I~-vy~~Ht~lD~~~~~G~n~~La~~Lgl~~~~~~ 618 (733)
..-+++|.+.|+|-+|. .....+...+....+.++|+. ++-+ .+.-..+.+.+......--.+
T Consensus 115 ~~f~~~~~~aGvdGvIi---------pDlp~ee~~~~~~~~~~~gl~~I~lv-------ap~t~~eri~~i~~~~~gfiY 178 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLI---------ADVPTNESQPFVAAAEKFGIQPIFIA-------PPTASDETLRAVAQLGKGYTY 178 (271)
T ss_dssp HHHHHHHHHHTCCEEEE---------TTSCGGGCHHHHHHHHHTTCEEEEEE-------CTTCCHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHCCCCEEEE---------CCCCHHHHHHHHHHHHHcCCeEEEEE-------CCCCCHHHHHHHHHHCCCeEE
Q ss_pred cccCccceeeeecccccccCCCCCHHHHHHHHHhHcCCCcEEeCCCCCceeEEEEeeCCc---hhHHHHhhhCCCcEEEE
Q psy2380 619 SKNNIGWIGKIINLKRYNFKKIITIKDLFHHITRKIGKKPIVIGDLNKKIYEIGWCTGAA---QNLLTDAINEGVTAYIS 695 (733)
Q Consensus 619 ~~~~~G~ig~~~~~~~~~l~~~~s~~el~~~lk~~l~~~~v~~~~~~~~v~rVai~~GsG---~~~i~~a~~~g~D~~IT 695 (733)
.....|..|. .-..+..+.++++++++..+.| ++.|.| .+-++++...|||.+|.
T Consensus 179 ~vs~~GvTG~-------~~~~~~~~~~~v~~vr~~~~~P---------------v~vGfGIst~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 179 LLSRAGVTGA-------ETKANMPVHALLERLQQFDAPP---------------ALLGFGISEPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp ECCCC---------------CCHHHHHHHHHHHHTTCCC---------------EEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred EEeccCCCCc-------ccCCchhHHHHHHHHHHhcCCC---------------EEEECCCCCHHHHHHHHHcCCCEEEE
Q ss_pred c
Q psy2380 696 G 696 (733)
Q Consensus 696 G 696 (733)
|
T Consensus 237 G 237 (271)
T 3nav_A 237 G 237 (271)
T ss_dssp S
T ss_pred C
No 390
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=23.66 E-value=1.3e+02 Score=31.46 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=49.5
Q ss_pred CEEEEEccCCChhHHHHHHHcCC-CcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchH-HHHHhCCCCcccEEEEcC
Q psy2380 245 GIYIDATFGQGGHSCKILERLGK-KGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELD-IILKKYNIKKIDGILFDL 321 (733)
Q Consensus 245 ~~~vD~T~G~Gghs~~il~~~~~-~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~-~~l~~~~~~~~dgil~DL 321 (733)
-.++|.=.|.||=+..+.+. +- -..++++|.|+.|++..+ +.. ...+++++-.++. +.+... .+|.++.+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~--~~~~~~~Di~~~~~~~~~~~---~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP--HTQLLAKTIEGITLEEFDRL---SFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT--TSCEECSCGGGCCHHHHHHH---CCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc--ccccccCCHHHccHhHcCcC---CcCEEEEcC
Confidence 36899999999999999876 22 136999999999999874 442 2335566555543 223321 589888875
No 391
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=23.65 E-value=38 Score=32.07 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhccccCCeEEEEe
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVIS 459 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~vis 459 (733)
++++.+|+.+.++|+|||++++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 367889999999999999998864
No 392
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=23.64 E-value=1.5e+02 Score=29.10 Aligned_cols=75 Identities=13% Similarity=0.196 Sum_probs=52.7
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+.+ ..+.+|+.+||+++..+.+ +.+. ..++.++..+.++-++ .+++. ..+++|.++-+
T Consensus 11 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 90 (257)
T 3imf_A 11 ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINN 90 (257)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5777888777777665 3467999999999988876 3453 4688989888876543 33321 11478999998
Q ss_pred CCCC
Q psy2380 321 LGIS 324 (733)
Q Consensus 321 LGvs 324 (733)
=|+.
T Consensus 91 Ag~~ 94 (257)
T 3imf_A 91 AAGN 94 (257)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8864
No 393
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=23.33 E-value=34 Score=33.04 Aligned_cols=26 Identities=15% Similarity=0.238 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
..+.+|+.+.++|+|||++++.+.|.
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 46788999999999999999988875
No 394
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=23.32 E-value=36 Score=32.37 Aligned_cols=26 Identities=23% Similarity=0.165 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
..+.+|+.+.++|+|||++++..+++
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 45788889999999999999998765
No 395
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=23.24 E-value=68 Score=30.72 Aligned_cols=23 Identities=22% Similarity=-0.012 Sum_probs=20.2
Q ss_pred HHHHHHHHhccccCCeEEEEecc
Q psy2380 439 SIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~visfh 461 (733)
+.+|+.+..+|+|||++++.|-+
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCCEEEEEeCC
Confidence 57789999999999999999854
No 396
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=23.22 E-value=1.6e+02 Score=28.30 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=51.7
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+.+ ..+.+|+++||+++..+.. +++. ..++.++..+.++.++ .+++. ...++|.++..
T Consensus 16 VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ 95 (255)
T 1fmc_A 16 ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNN 95 (255)
T ss_dssp ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred EECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 5777888777777765 3457999999999877654 3442 4578888888776543 33211 11368999988
Q ss_pred CCCCc
Q psy2380 321 LGISS 325 (733)
Q Consensus 321 LGvss 325 (733)
-|+..
T Consensus 96 Ag~~~ 100 (255)
T 1fmc_A 96 AGGGG 100 (255)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88753
No 397
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=23.19 E-value=41 Score=33.55 Aligned_cols=28 Identities=18% Similarity=0.133 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+..+.+|+.+.++|+|||++++.+.+.
T Consensus 150 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 150 SESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4678899999999999999999887664
No 398
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=23.07 E-value=1.3e+02 Score=25.85 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=41.7
Q ss_pred CCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 253 GQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 253 G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
|.|.-...+.+.+. .+.+|+.+|++++..+..++ ...+..+.++..+.+. +.+.++...|.++.=.+
T Consensus 11 G~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~--~~~~~~~~~d~~~~~~-l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 11 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA--EIDALVINGDCTKIKT-LEDAGIEDADMYIAVTG 78 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HCSSEEEESCTTSHHH-HHHTTTTTCSEEEECCS
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH--hcCcEEEEcCCCCHHH-HHHcCcccCCEEEEeeC
Confidence 66665555555442 24689999999987765421 1134566666665443 44445567898887654
No 399
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=23.07 E-value=55 Score=20.45 Aligned_cols=22 Identities=32% Similarity=0.298 Sum_probs=17.0
Q ss_pred HhhhHHHHHHHHHHHHhccccC
Q psy2380 431 INQELKNLSIALKIGFKKLNIK 452 (733)
Q Consensus 431 vN~El~~l~~~l~~~~~~l~~g 452 (733)
.-.||+.|+.-|++..+.|+.|
T Consensus 6 lykeledlqerlrklrkklrsg 27 (27)
T 3twe_A 6 LYKELEDLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 4478999999999888877654
No 400
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.02 E-value=1.3e+02 Score=29.24 Aligned_cols=76 Identities=16% Similarity=0.147 Sum_probs=51.9
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-.++.+.+. .+.+|+++|++++..+.. +.+. ..++.++..+.++.++ .+++. ...++|.++..
T Consensus 18 ItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 97 (260)
T 3awd_A 18 VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVAC 97 (260)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 57777877777777652 357999999998876654 3442 4578998888876544 33321 11368999999
Q ss_pred CCCCc
Q psy2380 321 LGISS 325 (733)
Q Consensus 321 LGvss 325 (733)
-|+..
T Consensus 98 Ag~~~ 102 (260)
T 3awd_A 98 AGICI 102 (260)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88754
No 401
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=23.01 E-value=34 Score=32.95 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhccccCCeEEEEec
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISF 460 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visf 460 (733)
+.++.+|+.+.++|+|||++++-.+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 5788999999999999999987544
No 402
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=22.75 E-value=1.1e+02 Score=31.49 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=19.8
Q ss_pred HHHHHHHhccccCCeEEEEeccc
Q psy2380 440 IALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 440 ~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+|+.+.++|+|||++++-.|+.
T Consensus 172 ~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 172 RVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHHhCCCCEEEEEeCCC
Confidence 47888889999999999877776
No 403
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=22.75 E-value=97 Score=27.21 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=59.0
Q ss_pred cCCChhHHHHHHHcC--CCcEEEEE-eCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCCCCcc--
Q psy2380 252 FGQGGHSCKILERLG--KKGRLIAI-DKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGISSN-- 326 (733)
Q Consensus 252 ~G~Gghs~~il~~~~--~~~~l~~~-D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGvss~-- 326 (733)
+|.|+|...+++.+. ++-+++|| |-|++... +.+ ..+..+ + .+++.+++++. .+|-+++-++-.+.
T Consensus 10 iGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g--~~i--~g~pV~-g-~~~l~~~~~~~---~id~viia~~~~~~~~ 80 (141)
T 3nkl_A 10 YGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHK--TTM--QGITIY-R-PKYLERLIKKH---CISTVLLAVPSASQVQ 80 (141)
T ss_dssp ECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTT--CEE--TTEEEE-C-GGGHHHHHHHH---TCCEEEECCTTSCHHH
T ss_pred ECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCC--CEe--cCeEEE-C-HHHHHHHHHHC---CCCEEEEeCCCCCHHH
Confidence 799999999988763 35678876 66653211 122 234444 4 78888888875 47888888876553
Q ss_pred --ccC--CCCCCcccCC-CCCcc-----ccCCCCCCCCHHHHHhcc
Q psy2380 327 --QIN--NELRGFSFLL-DGPLD-----MRMDITRGISASKWLANA 362 (733)
Q Consensus 327 --q~~--~~~rGfs~~~-~~pLD-----mRm~~~~~~~a~~~~n~~ 362 (733)
++- -.+.|+.+.. ...-| .++++-..+...|+|..-
T Consensus 81 ~~~i~~~l~~~gv~v~~vP~~~~~~~~~~~~~~l~~v~iedlLgR~ 126 (141)
T 3nkl_A 81 KKVIIESLAKLHVEVLTIPNLDDLVNGKLSIGQLKEVSIDDLLGRV 126 (141)
T ss_dssp HHHHHHHHHTTTCEEEECCCHHHHHTTSSCTTCCEECCHHHHHC--
T ss_pred HHHHHHHHHHcCCeEEECCCHHHHhCCCcccccCCCCCHHHcCCCC
Confidence 111 1245665542 11112 133444566777777653
No 404
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=22.73 E-value=74 Score=33.18 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhccccCCeEEEEeccch--hhhHHHHHHHhc
Q psy2380 435 LKNLSIALKIGFKKLNIKGRIVVISFHSL--EDRIVKNFINFN 475 (733)
Q Consensus 435 l~~l~~~l~~~~~~l~~gg~l~visfhSl--Edr~vk~~~~~~ 475 (733)
.+.++.+++.+.++|+|||++++.+..|. +....++.+++.
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a 290 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRET 290 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHH
Confidence 45678899999999999999776654443 344445555543
No 405
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.65 E-value=1.1e+02 Score=28.29 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=41.7
Q ss_pred CCChhHHHHHHHcC-C-CcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhC-CCCcccEEEEcCC
Q psy2380 253 GQGGHSCKILERLG-K-KGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKY-NIKKIDGILFDLG 322 (733)
Q Consensus 253 G~Gghs~~il~~~~-~-~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~-~~~~~dgil~DLG 322 (733)
|.|.=...+.+.+. . +..|+++|+|++..+.+++. .+..+.++..+.+ .+++. ++..+|.++.=.+
T Consensus 46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~---g~~~~~gd~~~~~-~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE---GRNVISGDATDPD-FWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT---TCCEEECCTTCHH-HHHTBCSCCCCCEEEECCS
T ss_pred CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC---CCCEEEcCCCCHH-HHHhccCCCCCCEEEEeCC
Confidence 55544444444432 2 45799999999888765432 3455666666644 45666 6778999887555
No 406
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=22.30 E-value=42 Score=33.63 Aligned_cols=26 Identities=19% Similarity=0.086 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhccccCCeEEEEecc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
+..+.+|+.+.++|+|||++++.+.+
T Consensus 152 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 152 SEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 46788999999999999999876554
No 407
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=22.22 E-value=1.1e+02 Score=34.98 Aligned_cols=69 Identities=17% Similarity=0.198 Sum_probs=50.5
Q ss_pred CEEEEEccCCChhHHHHHHHc---CCCcEEEEEeCCHHHHHHhcccC----CCcEEEEccCccchHHHHHhCCCCcccEE
Q psy2380 245 GIYIDATFGQGGHSCKILERL---GKKGRLIAIDKDTESVSLGNKIT----DSRFSIIHNCFTELDIILKKYNIKKIDGI 317 (733)
Q Consensus 245 ~~~vD~T~G~Gghs~~il~~~---~~~~~l~~~D~D~~a~~~a~~l~----~~r~~~~~~~f~~~~~~l~~~~~~~~dgi 317 (733)
.+++|.=.|.|--+.+-++.. +...||||++..|.|...-+..+ +++++++++.-++++ +. +++|.|
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~--LP----EKVDII 432 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV--AP----EKADII 432 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC--CS----SCEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc--CC----cccCEE
Confidence 588899999999977776653 22348999999998876433222 689999999888763 11 478877
Q ss_pred EE
Q psy2380 318 LF 319 (733)
Q Consensus 318 l~ 319 (733)
+=
T Consensus 433 VS 434 (637)
T 4gqb_A 433 VS 434 (637)
T ss_dssp EC
T ss_pred EE
Confidence 63
No 408
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=22.14 E-value=2.2e+02 Score=27.92 Aligned_cols=73 Identities=21% Similarity=0.267 Sum_probs=52.8
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC----CCcEEEEccCccch---HHHHHhCCCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT----DSRFSIIHNCFTEL---DIILKKYNIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~----~~r~~~~~~~f~~~---~~~l~~~~~~~~dgil~D 320 (733)
.|=|.||=-+++.+++ ..+.+|+..|++++..+.. +++. +.++..+....++- ++.+++. +++|.++-+
T Consensus 15 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id~lv~n 92 (267)
T 3t4x_A 15 VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY--PKVDILINN 92 (267)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC--CCCSEEEEC
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc--CCCCEEEEC
Confidence 5878888777777765 3467999999999888765 4442 35677787777654 4455554 479999999
Q ss_pred CCCC
Q psy2380 321 LGIS 324 (733)
Q Consensus 321 LGvs 324 (733)
=|++
T Consensus 93 Ag~~ 96 (267)
T 3t4x_A 93 LGIF 96 (267)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8875
No 409
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=22.09 E-value=1.9e+02 Score=28.76 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=52.7
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC---CCcEEEEccCccch-H---HHHHhC--CCCcccEEE
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT---DSRFSIIHNCFTEL-D---IILKKY--NIKKIDGIL 318 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~---~~r~~~~~~~f~~~-~---~~l~~~--~~~~~dgil 318 (733)
.|=|.||=-.++.+++ ..+.+|+..||+++..+.+ +++. ..++.++....++. + ...+.. ..+++|.++
T Consensus 17 ITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv 96 (311)
T 3o26_A 17 VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILV 96 (311)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEE
Confidence 6778887666666654 3467999999999887765 4443 35899998887775 2 222211 114799999
Q ss_pred EcCCCCc
Q psy2380 319 FDLGISS 325 (733)
Q Consensus 319 ~DLGvss 325 (733)
-+=|+..
T Consensus 97 ~nAg~~~ 103 (311)
T 3o26_A 97 NNAGVAG 103 (311)
T ss_dssp ECCCCCS
T ss_pred ECCcccc
Confidence 9999874
No 410
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=22.05 E-value=2.2e+02 Score=28.36 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=53.0
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+++ ..+.+|+.+|++++..+.. +.+. ..++.++..+.++-++ .+++. ..+++|.++-+
T Consensus 33 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 112 (283)
T 3v8b_A 33 ITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVAN 112 (283)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 5777888777777765 3467999999999988776 4553 4678888888776533 33321 11479999999
Q ss_pred CCCC
Q psy2380 321 LGIS 324 (733)
Q Consensus 321 LGvs 324 (733)
=|++
T Consensus 113 Ag~~ 116 (283)
T 3v8b_A 113 AGIN 116 (283)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8875
No 411
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=22.02 E-value=2e+02 Score=28.59 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=51.8
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+.+ ..+.+|+.+|++++..+.. +.+. ..++.++..+.++-++ .+++. ..+++|.++-+
T Consensus 29 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~n 108 (279)
T 3sju_A 29 VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNS 108 (279)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 5667777666666654 2467999999999988775 4453 4678888888877543 23221 11479999999
Q ss_pred CCCCc
Q psy2380 321 LGISS 325 (733)
Q Consensus 321 LGvss 325 (733)
=|+..
T Consensus 109 Ag~~~ 113 (279)
T 3sju_A 109 AGRNG 113 (279)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88653
No 412
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=21.98 E-value=31 Score=33.34 Aligned_cols=25 Identities=20% Similarity=0.142 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
+.+.+++.+.++|||||++++..-+
T Consensus 139 ~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 139 QIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEec
Confidence 4556788999999999999998533
No 413
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=21.92 E-value=31 Score=31.74 Aligned_cols=59 Identities=8% Similarity=-0.140 Sum_probs=39.9
Q ss_pred cCCCEEEEEccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHHHHHhCCCCcccEEEEc
Q psy2380 242 RINGIYIDATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDIILKKYNIKKIDGILFD 320 (733)
Q Consensus 242 ~~~~~~vD~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~D 320 (733)
++|..++|.+.|. +++|..+++++.|+ +.. +++++++++..++.. ....-+++|.|+..
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-~~~~~~~~d~~~~~~--~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-NEGRVSVENIKQLLQ--SAHKESSFDIILSG 70 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-TTSEEEEEEGGGGGG--GCCCSSCEEEEEEC
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-cCcEEEEechhcCcc--ccCCCCCEeEEEEC
Confidence 6788899987764 23899999999984 443 358888887776541 00122468888854
No 414
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=21.78 E-value=1.2e+02 Score=29.27 Aligned_cols=71 Identities=17% Similarity=0.285 Sum_probs=48.7
Q ss_pred EccCCChhHHHHHHHcCCCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHH------HHHhCCCCcccEEEEcCCC
Q psy2380 250 ATFGQGGHSCKILERLGKKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDI------ILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~------~l~~~~~~~~dgil~DLGv 323 (733)
.|=|.||=-+++.+++..+++|+++|++++..+...++ .++.++.....+-.. .+++ .+++|.++-+=|+
T Consensus 10 ITGas~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~--~~~id~lv~~Ag~ 85 (245)
T 3e9n_A 10 VTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAEI--EGVEPIESDIVKEVLEEGGVDKLKN--LDHVDTLVHAAAV 85 (245)
T ss_dssp EESTTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHTS--TTEEEEECCHHHHHHTSSSCGGGTT--CSCCSEEEECC--
T ss_pred EEcCCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhh--cCCcceecccchHHHHHHHHHHHHh--cCCCCEEEECCCc
Confidence 58888888888888887789999999999988765433 457777665544321 1121 2478988888887
Q ss_pred C
Q psy2380 324 S 324 (733)
Q Consensus 324 s 324 (733)
.
T Consensus 86 ~ 86 (245)
T 3e9n_A 86 A 86 (245)
T ss_dssp -
T ss_pred C
Confidence 5
No 415
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=21.76 E-value=1.8e+02 Score=28.75 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=51.4
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+.+ ..+.+|+++|++++..+.. +++. +.++.++..+.++-++ .+++. ..+.+|+++-+
T Consensus 36 ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~ 115 (272)
T 1yb1_A 36 ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNN 115 (272)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEEC
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEEC
Confidence 5777777767776654 2367999999999887765 3443 4578888888776543 33221 12469999999
Q ss_pred CCCC
Q psy2380 321 LGIS 324 (733)
Q Consensus 321 LGvs 324 (733)
-|+.
T Consensus 116 Ag~~ 119 (272)
T 1yb1_A 116 AGVV 119 (272)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 8865
No 416
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=21.74 E-value=79 Score=31.80 Aligned_cols=21 Identities=19% Similarity=-0.053 Sum_probs=18.9
Q ss_pred HHHHHHhccccCC--eEEEEecc
Q psy2380 441 ALKIGFKKLNIKG--RIVVISFH 461 (733)
Q Consensus 441 ~l~~~~~~l~~gg--~l~visfh 461 (733)
+|+.+.++|+||| ++++-.|+
T Consensus 165 ~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHhccCCCeEEEEEeCC
Confidence 7888889999999 99988888
No 417
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=21.67 E-value=1.9e+02 Score=28.82 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=52.1
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHhc-ccCCCcEEEEccCccchHH---HHHhC--CCCcccEEEEcCC
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLGN-KITDSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFDLG 322 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a~-~l~~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~DLG 322 (733)
.|=|.||=-+++.+++ ..+.+|+.+|++++.++... .+ +.++.++..+.++.++ .+++. ..+++|.++-+=|
T Consensus 10 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg 88 (281)
T 3zv4_A 10 ITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAG 88 (281)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 5777788777777765 24679999999999887653 33 4678888888776543 22221 1147999999988
Q ss_pred CCc
Q psy2380 323 ISS 325 (733)
Q Consensus 323 vss 325 (733)
+..
T Consensus 89 ~~~ 91 (281)
T 3zv4_A 89 IWD 91 (281)
T ss_dssp CCC
T ss_pred cCc
Confidence 753
No 418
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.63 E-value=1.2e+02 Score=28.90 Aligned_cols=67 Identities=21% Similarity=0.235 Sum_probs=46.1
Q ss_pred cCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCC
Q psy2380 252 FGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLG 322 (733)
Q Consensus 252 ~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLG 322 (733)
+|.|.=...+.+.+. .+..++.+|+|++.++.. ++. .+.+++++..+-+ .+++.++...|.++.-.|
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---KATIIHGDGSHKE-ILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---SSEEEESCTTSHH-HHHHHTCCTTCEEEECCS
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---CCeEEEcCCCCHH-HHHhcCcccCCEEEEecC
Confidence 466555555555542 356899999999988764 332 4677888887744 566677888999997543
No 419
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=21.62 E-value=41 Score=33.65 Aligned_cols=30 Identities=10% Similarity=0.251 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccchhh
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHSLED 465 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhSlEd 465 (733)
+.....++.+.++|+|||++++.++..-+.
T Consensus 145 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 174 (287)
T 1kpg_A 145 ERYDAFFSLAHRLLPADGVMLLHTITGLHP 174 (287)
T ss_dssp TTHHHHHHHHHHHSCTTCEEEEEEEEECCH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecCCCc
Confidence 356788999999999999999988776443
No 420
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=21.60 E-value=48 Score=30.39 Aligned_cols=19 Identities=16% Similarity=0.037 Sum_probs=10.3
Q ss_pred HHHHHHHHhccccCCeEEE
Q psy2380 439 SIALKIGFKKLNIKGRIVV 457 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~v 457 (733)
+++|+.+.++|||||++++
T Consensus 81 ~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFL 99 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 4455555555555555555
No 421
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=21.46 E-value=1.3e+02 Score=29.56 Aligned_cols=71 Identities=10% Similarity=0.201 Sum_probs=46.5
Q ss_pred CCChhHHHHHHHcCCCcEEEEEeCCHHHHHHh-cccC---CCcEEEEccCccchHH---HHHhC--CCCcccEEEEcCCC
Q psy2380 253 GQGGHSCKILERLGKKGRLIAIDKDTESVSLG-NKIT---DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFDLGI 323 (733)
Q Consensus 253 G~Gghs~~il~~~~~~~~l~~~D~D~~a~~~a-~~l~---~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~DLGv 323 (733)
|-|-+...-|-+ .+.+|+.+|++++..+.. +.+. ..++.++..+.++.++ .+++. ..+++|.++.+=|+
T Consensus 34 GIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 34 GIGSTTARRALL--EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp SHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred chHHHHHHHHHH--CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 344444333333 367999999999988775 3442 3689999988887544 23221 11479999999997
Q ss_pred Cc
Q psy2380 324 SS 325 (733)
Q Consensus 324 ss 325 (733)
+.
T Consensus 112 ~~ 113 (266)
T 3o38_A 112 GG 113 (266)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 422
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.34 E-value=98 Score=27.83 Aligned_cols=69 Identities=17% Similarity=0.120 Sum_probs=42.7
Q ss_pred cCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 252 FGQGGHSCKILERLG-KKGRLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 252 ~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
+|.|.=...+++.+. .+.+|+++|+|++..+.+++ ......+.++..+. +.+++.++..+|.++.=.|-
T Consensus 25 iG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~--~~g~~~~~~d~~~~-~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 25 FGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS--EFSGFTVVGDAAEF-ETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT--TCCSEEEESCTTSH-HHHHTTTGGGCSEEEECSSC
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh--cCCCcEEEecCCCH-HHHHHcCcccCCEEEEEeCC
Confidence 366655555555442 24589999999887655431 22345666666654 34555555678988887764
No 423
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=21.29 E-value=58 Score=32.56 Aligned_cols=42 Identities=7% Similarity=0.042 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHhccccCCeEEEEeccchhhhHHHHHHHhc
Q psy2380 433 QELKNLSIALKIGFKKLNIKGRIVVISFHSLEDRIVKNFINFN 475 (733)
Q Consensus 433 ~El~~l~~~l~~~~~~l~~gg~l~visfhSlEdr~vk~~~~~~ 475 (733)
+-++.++..++.+.++|+|||++++..-+.- ..-+++.+++.
T Consensus 212 ~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~l~~~ 253 (276)
T 2b3t_A 212 SGMADIVHIIEQSRNALVSGGFLLLEHGWQQ-GEAVRQAFILA 253 (276)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEECCSSC-HHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEEEECchH-HHHHHHHHHHC
Confidence 3457789999999999999999988543322 23466667653
No 424
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=21.02 E-value=2.3e+02 Score=27.40 Aligned_cols=76 Identities=14% Similarity=0.153 Sum_probs=52.0
Q ss_pred EccCCChhHHHHHHHcC--CCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEE
Q psy2380 250 ATFGQGGHSCKILERLG--KKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILF 319 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~--~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~ 319 (733)
.|=|.||=-.++.+.+. .+.+|+.+||+++..+.. +++. ..++.++..+.++.+. .+++. ...++|.++-
T Consensus 9 ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~ 88 (276)
T 1wma_A 9 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVN 88 (276)
T ss_dssp ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 67788887777777653 367999999998877654 3443 4578888888776543 33321 1136999998
Q ss_pred cCCCCc
Q psy2380 320 DLGISS 325 (733)
Q Consensus 320 DLGvss 325 (733)
.=|+..
T Consensus 89 ~Ag~~~ 94 (276)
T 1wma_A 89 NAGIAF 94 (276)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 888753
No 425
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=20.91 E-value=40 Score=32.93 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
..+.+|+.+.++|+|||++++.+.|.
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 123 SFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 46789999999999999999877763
No 426
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=20.66 E-value=61 Score=33.77 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccc
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
+...+.|+.+.+.|+|||+++|+.+..
T Consensus 272 ~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 272 QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 468889999999999999999988653
No 427
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.65 E-value=1.9e+02 Score=27.83 Aligned_cols=75 Identities=9% Similarity=0.170 Sum_probs=51.8
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccC-CCcEEEEccCccchHH---HHHhC--CCCcccEEEEcC
Q psy2380 250 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKIT-DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFDL 321 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~-~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~DL 321 (733)
.|=|.||=-+++.+.+- .+.+|+++||+++..+.. +.+. ..++.++..+.++.++ .+++. ..+++|.++.+-
T Consensus 11 VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~A 90 (251)
T 1zk4_A 11 ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNA 90 (251)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 67778887777777652 357999999999877664 3443 2578888888877543 33321 113689999998
Q ss_pred CCC
Q psy2380 322 GIS 324 (733)
Q Consensus 322 Gvs 324 (733)
|+.
T Consensus 91 g~~ 93 (251)
T 1zk4_A 91 GIA 93 (251)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 428
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=20.60 E-value=2.6e+02 Score=26.68 Aligned_cols=69 Identities=12% Similarity=0.083 Sum_probs=48.9
Q ss_pred EccCCChhHHHHHHHcCCCc--EEEEEeCCHHHHHHhcccCCCcEEEEccCccchHHHHHhCCCCcccEEEEcCCC
Q psy2380 250 ATFGQGGHSCKILERLGKKG--RLIAIDKDTESVSLGNKITDSRFSIIHNCFTELDIILKKYNIKKIDGILFDLGI 323 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~~~~--~l~~~D~D~~a~~~a~~l~~~r~~~~~~~f~~~~~~l~~~~~~~~dgil~DLGv 323 (733)
.|=|.||=-.++++.+-..+ +|++++|+++..+ .+...++.++..+..+-+.+-+.. ..+|.++...|.
T Consensus 28 VtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~vv~~a~~ 98 (236)
T 3qvo_A 28 ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH---KPYPTNSQIIMGDVLNHAALKQAM--QGQDIVYANLTG 98 (236)
T ss_dssp EETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC---SSCCTTEEEEECCTTCHHHHHHHH--TTCSEEEEECCS
T ss_pred EEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc---ccccCCcEEEEecCCCHHHHHHHh--cCCCEEEEcCCC
Confidence 56667777778888775554 9999999986432 233467999999888766544432 358999888874
No 429
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=20.54 E-value=42 Score=32.62 Aligned_cols=25 Identities=16% Similarity=0.064 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhccccCCeEEEEec
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISF 460 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visf 460 (733)
+.+..+|+.+.++|+|||++++.+.
T Consensus 174 ~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 174 ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4678999999999999999999875
No 430
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=20.51 E-value=1.9e+02 Score=28.28 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=52.3
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+++- .+.+|+.+|++++..+.. +.+. ..++.++....++.++ .+++. ..+++|.++-+
T Consensus 17 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~n 96 (256)
T 3gaf_A 17 VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNN 96 (256)
T ss_dssp ECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 57777877677666542 367899999999888775 3443 5688888888777543 23221 11379999999
Q ss_pred CCCCc
Q psy2380 321 LGISS 325 (733)
Q Consensus 321 LGvss 325 (733)
=|++.
T Consensus 97 Ag~~~ 101 (256)
T 3gaf_A 97 AGGGG 101 (256)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88753
No 431
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=20.50 E-value=2.2e+02 Score=27.36 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=53.2
Q ss_pred CCEEEEEccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccCCCcEEEEccCccchH---HHHHhCCCCcccEEE
Q psy2380 244 NGIYIDATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKITDSRFSIIHNCFTELD---IILKKYNIKKIDGIL 318 (733)
Q Consensus 244 ~~~~vD~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~~~r~~~~~~~f~~~~---~~l~~~~~~~~dgil 318 (733)
++.++ .|=|.||=-+++.+.+. .+.+|+..|++++.++.. +.+ .+++.++..+.++.+ +.+++. .++|.++
T Consensus 14 ~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li 89 (249)
T 3f9i_A 14 GKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNLANKEECSNLISKT--SNLDILV 89 (249)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-ccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence 44444 67788877777766542 467999999999988775 344 357888887777654 444443 4799999
Q ss_pred EcCCCCc
Q psy2380 319 FDLGISS 325 (733)
Q Consensus 319 ~DLGvss 325 (733)
-+=|+..
T Consensus 90 ~~Ag~~~ 96 (249)
T 3f9i_A 90 CNAGITS 96 (249)
T ss_dssp ECCC---
T ss_pred ECCCCCC
Confidence 9988764
No 432
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=20.43 E-value=92 Score=29.53 Aligned_cols=24 Identities=17% Similarity=-0.003 Sum_probs=20.9
Q ss_pred HHHHHHHHHhccccCCeEEEEecc
Q psy2380 438 LSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 438 l~~~l~~~~~~l~~gg~l~visfh 461 (733)
.+.+++.+.++|+|||++++.|-+
T Consensus 135 ~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 135 YKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp SHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CHHHHHHHHHHcCCCcEEEEEeCC
Confidence 567899999999999999998844
No 433
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=20.39 E-value=2.5e+02 Score=27.68 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=50.5
Q ss_pred EccCCChhHHHHHHHcC-CCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERLG-KKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~~-~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+.+. .+.+|+++||+++..+.. +.+. +.++.++..+.++-++ .+++. ..+.+|.++-+
T Consensus 27 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~ 106 (277)
T 2rhc_B 27 VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNN 106 (277)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEEC
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 56677776666666542 357999999999887664 4443 4578888887776443 23221 12469999999
Q ss_pred CCCC
Q psy2380 321 LGIS 324 (733)
Q Consensus 321 LGvs 324 (733)
=|+.
T Consensus 107 Ag~~ 110 (277)
T 2rhc_B 107 AGRP 110 (277)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8865
No 434
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=20.21 E-value=42 Score=33.09 Aligned_cols=24 Identities=17% Similarity=-0.011 Sum_probs=21.0
Q ss_pred HHHHHHHHhccccCCeEEEEeccc
Q psy2380 439 SIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~visfhS 462 (733)
..+|+.+..+|+|||++++.|-+.
T Consensus 148 ~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 148 PTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCH
T ss_pred HHHHHHHHHHCCCCCEEEEEeCCH
Confidence 468889999999999999999773
No 435
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=20.18 E-value=41 Score=34.38 Aligned_cols=25 Identities=24% Similarity=0.134 Sum_probs=22.2
Q ss_pred HHHHHHHHHhccccCCeEEEEeccc
Q psy2380 438 LSIALKIGFKKLNIKGRIVVISFHS 462 (733)
Q Consensus 438 l~~~l~~~~~~l~~gg~l~visfhS 462 (733)
.+.+|+.+.++|+|||+++++++..
T Consensus 200 ~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 200 LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 7889999999999999999988543
No 436
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=20.14 E-value=1.1e+02 Score=31.61 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=26.2
Q ss_pred HHHHHHHHhccccCCeEEEE--eccchhhh-HHHHHHHhc
Q psy2380 439 SIALKIGFKKLNIKGRIVVI--SFHSLEDR-IVKNFINFN 475 (733)
Q Consensus 439 ~~~l~~~~~~l~~gg~l~vi--sfhSlEdr-~vk~~~~~~ 475 (733)
++.|+.+.++|+ ||+|+.- |+|.-|+. .|++|+++.
T Consensus 215 ~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 215 QRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQN 253 (309)
T ss_dssp HHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTS
T ss_pred HHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhC
Confidence 456888888886 9987764 47777855 778877664
No 437
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=20.12 E-value=2.7e+02 Score=26.71 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=51.5
Q ss_pred EccCCChhHHHHHHHc-CCCcEEEEEeCCHHHHHHh-cccC--CCcEEEEccCccchHH---HHHhC--CCCcccEEEEc
Q psy2380 250 ATFGQGGHSCKILERL-GKKGRLIAIDKDTESVSLG-NKIT--DSRFSIIHNCFTELDI---ILKKY--NIKKIDGILFD 320 (733)
Q Consensus 250 ~T~G~Gghs~~il~~~-~~~~~l~~~D~D~~a~~~a-~~l~--~~r~~~~~~~f~~~~~---~l~~~--~~~~~dgil~D 320 (733)
.|=|.||=-+++.+++ ..+.+|+..|++++..+.. +.+. ..++.++..+.++.++ .+++. ...++|.++-+
T Consensus 10 ITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ 89 (247)
T 3lyl_A 10 VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNN 89 (247)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEEC
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4666676555665554 2367999999999887765 3443 4578888888877543 33321 22479999999
Q ss_pred CCCCc
Q psy2380 321 LGISS 325 (733)
Q Consensus 321 LGvss 325 (733)
=|++.
T Consensus 90 Ag~~~ 94 (247)
T 3lyl_A 90 AGITR 94 (247)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99764
No 438
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=20.10 E-value=68 Score=33.35 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
+..+.|+++.+.|+|||+++|+.+.
T Consensus 264 ~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 264 DSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 5578899999999999999998763
No 439
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=20.08 E-value=78 Score=29.32 Aligned_cols=24 Identities=13% Similarity=-0.170 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHh--ccccCCeEEEEe
Q psy2380 436 KNLSIALKIGFK--KLNIKGRIVVIS 459 (733)
Q Consensus 436 ~~l~~~l~~~~~--~l~~gg~l~vis 459 (733)
+.++..++.+.+ +|+|||++++-+
T Consensus 128 ~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 128 ADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp HHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred hhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 567888888888 999999998854
No 440
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=20.05 E-value=40 Score=34.09 Aligned_cols=25 Identities=12% Similarity=0.328 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhccccCCeEEEEecc
Q psy2380 437 NLSIALKIGFKKLNIKGRIVVISFH 461 (733)
Q Consensus 437 ~l~~~l~~~~~~l~~gg~l~visfh 461 (733)
..+.+++.+.++|+|||++++.+|.
T Consensus 127 ~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 127 DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 4678899999999999999997765
No 441
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=20.03 E-value=50 Score=33.67 Aligned_cols=29 Identities=28% Similarity=0.264 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhccccCCeEEEEeccchh
Q psy2380 436 KNLSIALKIGFKKLNIKGRIVVISFHSLE 464 (733)
Q Consensus 436 ~~l~~~l~~~~~~l~~gg~l~visfhSlE 464 (733)
+..+.+++.+.++|+|||++++.++..-+
T Consensus 171 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 171 ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 35788999999999999999998876543
Done!