Your job contains 1 sequence.
>psy2382
MYNKFISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLIC
MTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAK
PSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPD
LIKFSKLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLT
LIYGSINPNKIIPIWLNQQLSIFDFLHAKTSSCTQNNISSIMKIMKLIKNGAQEKNILHI
SVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPI
INAILTTETIEQANSRILTKVNLIKNKTPRHRAREFALQGIYQWLFNNMDVNLIETYIKE
ISNFYKVDKKYFYLILRGVINDINFLRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHY
KIPYKVIINEAIELVKSFGNIDGYKYVNKILDKVALNIRNIKFKKIN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2382
(527 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SO_3467 - symbol:SO_3467 "3,4-dihydroxy-2-butano... 758 3.5e-75 1
UNIPROTKB|Q9KPU3 - symbol:VC_2269 "3,4-dihydroxy-2-butano... 724 1.4e-71 1
TIGR_CMR|VC_2269 - symbol:VC_2269 "3,4-dihydroxy-2-butano... 724 1.4e-71 1
TIGR_CMR|GSU_1690 - symbol:GSU_1690 "3,4-dihydroxy-2-buta... 685 1.9e-67 1
TIGR_CMR|CPS_0732 - symbol:CPS_0732 "3,4-dihydroxy-2-buta... 640 1.1e-62 1
TIGR_CMR|DET_1188 - symbol:DET_1188 "3,4-dihydroxy-2-buta... 629 1.6e-61 1
TIGR_CMR|SPO_1761 - symbol:SPO_1761 "3,4-dihydroxy-2-buta... 612 1.0e-59 1
TIGR_CMR|CHY_1473 - symbol:CHY_1473 "3,4-dihydroxy-2-buta... 590 2.2e-57 1
TIGR_CMR|BA_4333 - symbol:BA_4333 "3,4-dihydroxy-2-butano... 564 1.3e-54 1
TAIR|locus:2173373 - symbol:GCH "GTP cyclohydrolase II" s... 545 1.3e-52 1
TIGR_CMR|CBU_0647 - symbol:CBU_0647 "riboflavin biosynthe... 544 1.7e-52 1
TAIR|locus:2041253 - symbol:RIBA2 "homolog of ribA 2" spe... 543 2.1e-52 1
UNIPROTKB|P0A7J0 - symbol:ribB "3,4-dihydroxy-2-butanone ... 512 4.1e-49 1
TIGR_CMR|ECH_0134 - symbol:ECH_0134 "3,4-dihydroxy-2-buta... 507 1.4e-48 1
UNIPROTKB|Q9KKP2 - symbol:ribB "3,4-dihydroxy-2-butanone ... 497 1.6e-47 1
TIGR_CMR|VC_A1060 - symbol:VC_A1060 "3,4-dihydroxy-2-buta... 497 1.6e-47 1
TIGR_CMR|APH_1332 - symbol:APH_1332 "3,4-dihydroxy-2-buta... 494 3.3e-47 1
TIGR_CMR|CJE_0675 - symbol:CJE_0675 "3,4-dihydroxy-2-buta... 493 4.2e-47 1
UNIPROTKB|P0A5V0 - symbol:ribBA "Riboflavin biosynthesis ... 492 5.4e-47 1
TIGR_CMR|SO_0142 - symbol:SO_0142 "3,4-dihydroxy-2-butano... 485 3.0e-46 1
CGD|CAL0003526 - symbol:RIB3 species:5476 "Candida albica... 425 6.8e-40 1
UNIPROTKB|Q5A3V6 - symbol:RIB3 "3,4-dihydroxy-2-butanone ... 425 6.8e-40 1
POMBASE|SPBC23E6.06c - symbol:SPBC23E6.06c "3,4-dihydroxy... 406 7.0e-38 1
TIGR_CMR|NSE_0649 - symbol:NSE_0649 "3,4-dihydroxy-2-buta... 384 1.5e-35 1
SGD|S000002895 - symbol:RIB3 "3,4-dihydroxy-2-butanone-4-... 370 4.6e-34 1
UNIPROTKB|Q8TG90 - symbol:RIB3 "3,4-dihydroxy-2-butanone ... 355 1.8e-32 1
TIGR_CMR|CPS_1532 - symbol:CPS_1532 "transcription termin... 254 4.6e-21 1
TIGR_CMR|CBU_1417 - symbol:CBU_1417 "N utilization substa... 246 3.4e-20 1
UNIPROTKB|P0A780 - symbol:nusB "transcription antitermina... 236 4.2e-19 1
TIGR_CMR|CJE_0432 - symbol:CJE_0432 "6,7-dimethyl-8-ribit... 215 8.1e-17 1
UNIPROTKB|Q9KPU5 - symbol:nusB "N utilization substance p... 198 5.7e-15 1
TIGR_CMR|VC_2267 - symbol:VC_2267 "N utilization substanc... 198 5.7e-15 1
TIGR_CMR|SO_3465 - symbol:SO_3465 "N utilization substanc... 195 1.2e-14 1
TIGR_CMR|BA_4334 - symbol:BA_4334 "6,7-dimethyl-8-ribityl... 194 1.5e-14 1
TIGR_CMR|SO_3466 - symbol:SO_3466 "6,7-dimethyl-8-ribityl... 190 4.2e-14 1
UNIPROTKB|P61714 - symbol:ribE "RibE" species:83333 "Esch... 173 4.3e-14 2
TIGR_CMR|GSU_1691 - symbol:GSU_1691 "6,7-dimethyl-8-ribit... 186 1.1e-13 1
TIGR_CMR|VC_2268 - symbol:VC_2268 "6,7-dimethyl-8-ribityl... 163 1.6e-13 2
TIGR_CMR|CPS_1531 - symbol:CPS_1531 "6,7-dimethyl-8-ribit... 179 6.5e-13 1
TIGR_CMR|CHY_1472 - symbol:CHY_1472 "6,7-dimethyl-8-ribit... 177 1.1e-12 1
TIGR_CMR|CBU_0648 - symbol:CBU_0648 "6,7-dimethyl-8-ribit... 169 7.8e-12 1
TIGR_CMR|DET_1187 - symbol:DET_1187 "6,7-dimethyl-8-ribit... 163 3.5e-11 1
TAIR|locus:2051739 - symbol:COS1 "AT2G44050" species:3702... 163 2.1e-10 1
SGD|S000005503 - symbol:RIB4 "Lumazine synthase (DMRL syn... 154 3.2e-10 1
TIGR_CMR|NSE_0401 - symbol:NSE_0401 "6,7-dimethyl-8-ribit... 151 6.8e-10 1
TIGR_CMR|CJE_0431 - symbol:CJE_0431 "transcription antite... 147 1.8e-09 1
UNIPROTKB|P66034 - symbol:ribH "6,7-dimethyl-8-ribityllum... 145 3.0e-09 1
POMBASE|SPBC409.13 - symbol:SPBC409.13 "6,7-dimethyl-8-ri... 143 5.0e-09 1
TIGR_CMR|SPO_1762 - symbol:SPO_1762 "6,7-dimethyl-8-ribit... 137 2.2e-08 1
TIGR_CMR|DET_1278 - symbol:DET_1278 "N utilization substa... 134 4.7e-08 1
TIGR_CMR|GSU_1692 - symbol:GSU_1692 "N utilization substa... 122 9.1e-07 1
TIGR_CMR|BA_4406 - symbol:BA_4406 "N utilization substanc... 121 1.2e-06 1
TIGR_CMR|APH_0539 - symbol:APH_0539 "6,7-dimethyl-8-ribit... 116 4.0e-06 1
ASPGD|ASPL0000028987 - symbol:riboG species:162425 "Emeri... 128 6.8e-06 1
>TIGR_CMR|SO_3467 [details] [associations]
symbol:SO_3467 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0003935 "GTP cyclohydrolase II
activity" evidence=ISS] [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0046872 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 GO:GO:0008686
TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652
RefSeq:NP_719016.1 HSSP:P24199 ProteinModelPortal:Q8EBP2 SMR:Q8EBP2
GeneID:1171143 KEGG:son:SO_3467 PATRIC:23526630 OMA:DVHMALT
ProtClustDB:CLSK874738 Uniprot:Q8EBP2
Length = 367
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 147/264 (55%), Positives = 191/264 (72%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
+ S +EII +++ G M+IL+D E+RENEGD+IL+++ VTP AINFM+KY RGLIC T+T+
Sbjct: 3 LHSIEEIIEDIRQGKMVILMDDEDRENEGDLILAAEMVTPEAINFMAKYGRGLICQTMTK 62
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
C QL L +M NN+ F TNFTVSIEAA GVTTGISA DRA T+K A +K AK SD+V
Sbjct: 63 ARCQQLNLPLMVTNNNAQFSTNFTVSIEAAEGVTTGISAHDRAVTVKAAVAKDAKASDLV 122
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
QPGHIFPL A+ GGVL R GHTEAGCDL +LAGL PS VI EILN+DGTMAR PDL FS
Sbjct: 123 QPGHIFPLMAQDGGVLTRAGHTEAGCDLARLAGLEPSGVIVEILNEDGTMARRPDLEIFS 182
Query: 186 KLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGS 245
+ H IKIGTI+ LI YR E + R+A+ + T +G F ++ + D I+N +H L+ G
Sbjct: 183 EKHGIKIGTIAALIEYRNTKETTVVREAKCKLPTRFGEFDMVTFRDTIDNQLHFALVKGE 242
Query: 246 INPNKIIPIWLNQQLSIFDFLHAK 269
+ P+ ++ + L + D LH++
Sbjct: 243 VKPDCLVRVHLQNTFN--DLLHSE 264
>UNIPROTKB|Q9KPU3 [details] [associations]
symbol:VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0003935 "GTP cyclohydrolase II
activity" evidence=ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422
InterPro:IPR000926 InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926
PIRSF:PIRSF001259 UniPathway:UPA00275 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 GO:GO:0008686
TIGRFAMs:TIGR00506 KO:K14652 HSSP:P24199 PIR:D82098
RefSeq:NP_231900.1 ProteinModelPortal:Q9KPU3 SMR:Q9KPU3
DNASU:2613191 GeneID:2613191 KEGG:vch:VC2269 PATRIC:20083579
OMA:LLHWRRD ProtClustDB:CLSK2502553 Uniprot:Q9KPU3
Length = 369
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 141/267 (52%), Positives = 197/267 (73%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
IS+ +EII +++ G M+IL+D E+RENEGD+I++++ +TP AINFM+ + RGLIC+TLT+
Sbjct: 3 ISTPQEIIEDIRQGKMVILMDDEDRENEGDLIMAAEHITPAAINFMATHGRGLICLTLTK 62
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+ C +L L+ M + NN+ + TNFTVSIEAA GVTTGISA+DRA T++ A +K+AK +D+V
Sbjct: 63 ERCRRLGLNPMVQDNNAQYTTNFTVSIEAAEGVTTGISAADRARTVQAAVAKEAKAADLV 122
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
QPGHIFPL A+ GGVL R GHTEAGCDL +LAGL P++VI EILNDDGTMAR PDL F+
Sbjct: 123 QPGHIFPLAAQDGGVLTRAGHTEAGCDLARLAGLEPASVIVEILNDDGTMARRPDLEVFA 182
Query: 186 KLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGS 245
+ H +K+GTI++LI YR E I+R A+ + T YG F+++ Y D I+ IH L G
Sbjct: 183 EKHGLKLGTIADLIEYRNHTETTIERVAQCKLPTEYGEFELVTYRDIIDKQIHFALRKGD 242
Query: 246 INPNKIIPIWLNQQLSIFDFLHAKTSS 272
I + + ++ Q + D LH+ ++
Sbjct: 243 ITSAPTL-VRVHLQDTFTDLLHSNRAA 268
>TIGR_CMR|VC_2269 [details] [associations]
symbol:VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II" species:686 "Vibrio cholerae O1
biovar El Tor" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 GO:GO:0008686
TIGRFAMs:TIGR00506 KO:K14652 HSSP:P24199 PIR:D82098
RefSeq:NP_231900.1 ProteinModelPortal:Q9KPU3 SMR:Q9KPU3
DNASU:2613191 GeneID:2613191 KEGG:vch:VC2269 PATRIC:20083579
OMA:LLHWRRD ProtClustDB:CLSK2502553 Uniprot:Q9KPU3
Length = 369
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 141/267 (52%), Positives = 197/267 (73%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
IS+ +EII +++ G M+IL+D E+RENEGD+I++++ +TP AINFM+ + RGLIC+TLT+
Sbjct: 3 ISTPQEIIEDIRQGKMVILMDDEDRENEGDLIMAAEHITPAAINFMATHGRGLICLTLTK 62
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+ C +L L+ M + NN+ + TNFTVSIEAA GVTTGISA+DRA T++ A +K+AK +D+V
Sbjct: 63 ERCRRLGLNPMVQDNNAQYTTNFTVSIEAAEGVTTGISAADRARTVQAAVAKEAKAADLV 122
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
QPGHIFPL A+ GGVL R GHTEAGCDL +LAGL P++VI EILNDDGTMAR PDL F+
Sbjct: 123 QPGHIFPLAAQDGGVLTRAGHTEAGCDLARLAGLEPASVIVEILNDDGTMARRPDLEVFA 182
Query: 186 KLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGS 245
+ H +K+GTI++LI YR E I+R A+ + T YG F+++ Y D I+ IH L G
Sbjct: 183 EKHGLKLGTIADLIEYRNHTETTIERVAQCKLPTEYGEFELVTYRDIIDKQIHFALRKGD 242
Query: 246 INPNKIIPIWLNQQLSIFDFLHAKTSS 272
I + + ++ Q + D LH+ ++
Sbjct: 243 ITSAPTL-VRVHLQDTFTDLLHSNRAA 268
>TIGR_CMR|GSU_1690 [details] [associations]
symbol:GSU_1690 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=ISS] [GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] HAMAP:MF_00179 HAMAP:MF_00180
HAMAP:MF_01283 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0005525 GO:GO:0046872 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 TIGRFAMs:TIGR00505
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652
OMA:LRCDCRM HSSP:Q8TG90 RefSeq:NP_952741.1
ProteinModelPortal:Q74CI3 SMR:Q74CI3 GeneID:2685374
KEGG:gsu:GSU1690 PATRIC:22026229 ProtClustDB:CLSK828487
BioCyc:GSUL243231:GH27-1720-MONOMER Uniprot:Q74CI3
Length = 400
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 128/268 (47%), Positives = 187/268 (69%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
++ +E I +++ G M+ILVD E+RENEGD+ ++++ VTP AINFM+++ RGLIC+T+T
Sbjct: 3 VARIEEAIEDIRQGKMVILVDDEDRENEGDLTMAAEMVTPEAINFMARFGRGLICLTMTT 62
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+ C L+L +M N SSFGT FTVSIEA GVTTGISA+DRAHTI A + AK D+
Sbjct: 63 ERCDHLQLPLMVSANTSSFGTAFTVSIEAKRGVTTGISAADRAHTILTAVADDAKADDLA 122
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
+PGH+FPL+AK GGVL+R G TE DL +LAGL P+ VICEI+NDDGTMAR+P L F+
Sbjct: 123 RPGHVFPLRAKPGGVLVRAGQTEGSVDLARLAGLKPAGVICEIMNDDGTMARMPQLKVFA 182
Query: 186 KLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGS 245
K H I+I TI++L+ YR K+E++++R A+ + T +G F+ I + + ++ HL L+ G
Sbjct: 183 KEHGIRICTIADLVAYRLKHESLVRRAADVLLPTDFGEFRAIAFENDVDRLEHLALVKGE 242
Query: 246 INPNKIIPIWLNQQLSIFDFLHAKTSSC 273
I ++ + + ++ + D + C
Sbjct: 243 IRGDEPVLVRVHSECMTGDVFGSLRCDC 270
>TIGR_CMR|CPS_0732 [details] [associations]
symbol:CPS_0732 "3,4-dihydroxy-2-butanone-4-phosphate
synthase" species:167879 "Colwellia psychrerythraea 34H"
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISS] InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0046872 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 eggNOG:COG0108
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652
RefSeq:YP_267482.1 ProteinModelPortal:Q488N2 STRING:Q488N2
GeneID:3521384 KEGG:cps:CPS_0732 PATRIC:21464779 OMA:SSCEDRQ
BioCyc:CPSY167879:GI48-819-MONOMER Uniprot:Q488N2
Length = 369
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 129/267 (48%), Positives = 184/267 (68%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
+++ +EII+++ +G M+IL+D E+RENEGD I++++ VTP AINFM+ + RGLICM ++
Sbjct: 3 LNTPQEIIADIALGKMVILMDDEDRENEGDFIMAAEKVTPAAINFMATHGRGLICMPMSR 62
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+ C LKL +M KN + F TNFTVSIEAA GVTTGISA+DRA T+ A++K+A IV
Sbjct: 63 EKCETLKLPLMVDKNEAQFSTNFTVSIEAATGVTTGISAADRATTVLAAANKEATHLSIV 122
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
QPGHIFPL AK GGVL R GHTEA DL ++AG +AVI EILN+DGTMAR DL +
Sbjct: 123 QPGHIFPLIAKDGGVLNRAGHTEASVDLARMAGFESAAVIVEILNEDGTMARRSDLEVIA 182
Query: 186 KLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGS 245
+ H+IK+GTI++LI +R E I+R ++ + T +G F + V+ D I+ H L G
Sbjct: 183 QKHDIKMGTIADLIEFRNATETTIERVSQCKLPTAFGEFDLTVFKDTIDGQAHFALTKGE 242
Query: 246 INPNKIIPIWLNQQLSIFDFLHAKTSS 272
I ++ + ++ + + D L ++ S
Sbjct: 243 IKADEPTLVRVHLENTFRDLLFSQRES 269
>TIGR_CMR|DET_1188 [details] [associations]
symbol:DET_1188 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=ISS] [GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] HAMAP:MF_00179 HAMAP:MF_00180
HAMAP:MF_01283 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0005525 GO:GO:0046872 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 TIGRFAMs:TIGR00505
eggNOG:COG0108 GO:GO:0008686 TIGRFAMs:TIGR00506
HOGENOM:HOG000115440 KO:K14652 OMA:LRCDCRM RefSeq:YP_181901.1
ProteinModelPortal:Q3Z798 SMR:Q3Z798 STRING:Q3Z798 GeneID:3229535
KEGG:det:DET1188 PATRIC:21609411 ProtClustDB:CLSK837092
BioCyc:DETH243164:GJNF-1189-MONOMER Uniprot:Q3Z798
Length = 403
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 121/264 (45%), Positives = 179/264 (67%)
Query: 10 KEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCI 69
++ I+++K G +I+VD +RENEGD++++S+ VTP+AINFM+K ARGLIC++LT +
Sbjct: 7 EDAIADIKAGRFVIVVDDYDRENEGDLVMASEMVTPDAINFMAKNARGLICVSLTAERLE 66
Query: 70 QLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQPGH 129
QLK+ MM +N S + T FTVS+EA VTTGISA+DRA T++V A DI PGH
Sbjct: 67 QLKIPMMVTENTSPYSTGFTVSVEARKKVTTGISAADRAATVQVLIDPAATREDIAMPGH 126
Query: 130 IFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSKLHN 189
+FPL+A++GGVL+R GHTEA DLT++AGL PS V+CEI+NDDGTMARLP L +
Sbjct: 127 MFPLRAREGGVLVRAGHTEASMDLTRMAGLYPSGVLCEIMNDDGTMARLPQLEAKAAEWA 186
Query: 190 IKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGSINPN 249
IKI ++ ++I YR + E ++K+ E + T +G FK + Y + + D H+ L+ G I+
Sbjct: 187 IKIISVKDIISYRRRTEKMVKKITEAELPTSHGQFKAVAYKSQFDADEHIALVMGDISGP 246
Query: 250 KIIPIWLNQQLSIFDFLHAKTSSC 273
+ + + ++ + D +K C
Sbjct: 247 EPVLVRVHSECITGDVFGSKRCDC 270
>TIGR_CMR|SPO_1761 [details] [associations]
symbol:SPO_1761 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II, putative" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=ISS] [GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] HAMAP:MF_00180
InterPro:IPR000422 InterPro:IPR000926 InterPro:IPR016299
Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259 UniPathway:UPA00275
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0009231
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652
RefSeq:YP_166999.1 ProteinModelPortal:Q5LSK6 GeneID:3193366
KEGG:sil:SPO1761 PATRIC:23376845 OMA:RTHALHE ProtClustDB:CLSK933632
Uniprot:Q5LSK6
Length = 373
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 120/249 (48%), Positives = 174/249 (69%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
IS +EII E + G M ILVD E+RENEGD+ ++++F AINFM+ + RGLIC+ +T
Sbjct: 17 ISPIEEIIDEARKGRMYILVDHEDRENEGDLCIAAEFADAAAINFMATHGRGLICLPMTA 76
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+L L MM N+S T FTVSIEA GV+TGISA+DRA T+ A +++ + +
Sbjct: 77 DRIDRLGLPMMAVNNSSRHETAFTVSIEAREGVSTGISAADRALTVATAINEQNTMASLA 136
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
PGHIFPL+AK+GGVL+R GHTEA D+++LAGL PS VICEI+ +DGTMARLPDL+ F+
Sbjct: 137 TPGHIFPLRAKRGGVLVRAGHTEAAVDISRLAGLNPSGVICEIMKEDGTMARLPDLVDFA 196
Query: 186 KLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYG-NFKIIVYIDKINNDIHLTLIYG 244
+ H +KIGTIS+LI YR + +N++ A + + YG ++++ ++ D+ + H+ L+ G
Sbjct: 197 ERHGMKIGTISDLISYRARNDNLVDETARSTVTSEYGGDWEMRIFTDQTHGIEHVVLVKG 256
Query: 245 SIN-PNKII 252
I+ P ++
Sbjct: 257 DISTPEPVL 265
>TIGR_CMR|CHY_1473 [details] [associations]
symbol:CHY_1473 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003935 "GTP cyclohydrolase II
activity" evidence=ISS] [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00179 HAMAP:MF_00180 HAMAP:MF_01283
InterPro:IPR000422 InterPro:IPR000926 InterPro:IPR016299
Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259 UniPathway:UPA00275
GO:GO:0005525 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0009231 Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
GO:GO:0003935 TIGRFAMs:TIGR00505 eggNOG:COG0108 GO:GO:0008686
TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652 OMA:LRCDCRM
RefSeq:YP_360305.1 ProteinModelPortal:Q3AC29 SMR:Q3AC29
STRING:Q3AC29 GeneID:3726794 KEGG:chy:CHY_1473 PATRIC:21276077
BioCyc:CHYD246194:GJCN-1472-MONOMER Uniprot:Q3AC29
Length = 401
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 115/267 (43%), Positives = 177/267 (66%)
Query: 7 SSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEK 66
++ +E + +LK G M+I+VD E+RENEGD++ +++ VTP INFM+KY RGLIC+ + K
Sbjct: 4 NTIEEALEDLKQGKMVIVVDDEDRENEGDLVCAAEKVTPEIINFMAKYGRGLICVPMEGK 63
Query: 67 HCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQ 126
+L++ +M +N T FTVS++A + TGISA++RA TI +A+P D +
Sbjct: 64 RLDELEIPIMVTQNTDPHHTAFTVSVDAVD-THTGISAAERAKTILKLIDPQARPQDFRR 122
Query: 127 PGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSK 186
PGHIFPL+AK+GGVL R GHTEA DL +LAGL P+ VICEI+ DDG MAR+PDL++F++
Sbjct: 123 PGHIFPLRAKEGGVLRRAGHTEAAVDLARLAGLYPAGVICEIMRDDGQMARVPDLLEFAQ 182
Query: 187 LHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGSI 246
HN+KI TI++LI YR + E +++R A + T YG F + Y +++ HL ++ G++
Sbjct: 183 KHNLKIITIASLIQYRRRNEKLVERGAFAMLPTKYGEFVAVAYESLLDHQTHLAVVKGNV 242
Query: 247 NPNKIIPIWLNQQLSIFDFLHAKTSSC 273
+ + + ++ + D + C
Sbjct: 243 ADGEPVLVRVHSECLTGDVFGSLRCDC 269
>TIGR_CMR|BA_4333 [details] [associations]
symbol:BA_4333 "3,4-dihydroxy-2-butanone 4-phosphate
synthase/GTP cyclohydrolase II" species:198094 "Bacillus anthracis
str. Ames" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=ISS] [GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] HAMAP:MF_01283
InterPro:IPR000422 InterPro:IPR000926 InterPro:IPR016299
Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259 UniPathway:UPA00275
GO:GO:0005525 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 HSSP:P0A7I7 GO:GO:0003935
TIGRFAMs:TIGR00505 eggNOG:COG0108 GO:GO:0008686 TIGRFAMs:TIGR00506
HOGENOM:HOG000115440 KO:K14652 OMA:LRCDCRM RefSeq:NP_846566.1
RefSeq:YP_020979.1 RefSeq:YP_030270.1 ProteinModelPortal:Q81MB6
SMR:Q81MB6 IntAct:Q81MB6 DNASU:1087528
EnsemblBacteria:EBBACT00000011097 EnsemblBacteria:EBBACT00000016348
EnsemblBacteria:EBBACT00000022845 GeneID:1087528 GeneID:2818522
GeneID:2850961 KEGG:ban:BA_4333 KEGG:bar:GBAA_4333 KEGG:bat:BAS4020
ProtClustDB:PRK09311 BioCyc:BANT260799:GJAJ-4077-MONOMER
BioCyc:BANT261594:GJ7F-4217-MONOMER Uniprot:Q81MB6
Length = 397
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 112/264 (42%), Positives = 170/264 (64%)
Query: 10 KEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCI 69
+E + +LK G ++I+ D ENRENEGD I ++++TP INFM + RGL+C+ +TE +
Sbjct: 6 EEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAE 65
Query: 70 QLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQPGH 129
+L+L+ M N S T FTVSI+ + TTGISA +RA TI+ + +K +D +PGH
Sbjct: 66 RLQLEPMVSHNTDSHHTAFTVSIDHVS-TTTGISAHERATTIQQLLNPASKGADFNRPGH 124
Query: 130 IFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSKLHN 189
IFPL AK+GGVL R GHTEA DL +L G P+ VICEI+N+DGTMAR+PDL++ +K +
Sbjct: 125 IFPLIAKEGGVLRRAGHTEAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFD 184
Query: 190 IKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYGSINPN 249
IK+ TI +LI YR +E ++ R+ E + T +G F+ I Y + ++ H+ L+ G I+
Sbjct: 185 IKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTG 244
Query: 250 KIIPIWLNQQLSIFDFLHAKTSSC 273
+ + + ++ + D + C
Sbjct: 245 EPVLVRVHSECLTGDVFGSCRCDC 268
>TAIR|locus:2173373 [details] [associations]
symbol:GCH "GTP cyclohydrolase II" species:3702
"Arabidopsis thaliana" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=IEA;IGI;ISS] [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=IEA;IGI;ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=IEA;IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0048767 "root hair elongation"
evidence=RCA] InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 UniPathway:UPA00275
GO:GO:0005525 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570
GO:GO:0016020 GO:GO:0046872 EMBL:AB008268 GO:GO:0009231
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935
TIGRFAMs:TIGR00505 eggNOG:COG0108 GO:GO:0008686 TIGRFAMs:TIGR00506
EMBL:AJ000053 EMBL:D45165 IPI:IPI00522822 PIR:JC4209
RefSeq:NP_201235.4 UniGene:At.49217 ProteinModelPortal:P47924
SMR:P47924 STRING:P47924 PaxDb:P47924 PRIDE:P47924
EnsemblPlants:AT5G64300.1 GeneID:836551 KEGG:ath:AT5G64300
GeneFarm:2299 TAIR:At5g64300 HOGENOM:HOG000115440 InParanoid:P47924
KO:K14652 OMA:LRCDCRM PhylomeDB:P47924 ProtClustDB:PLN02831
BioCyc:ARA:AT5G64300-MONOMER BioCyc:MetaCyc:AT5G64300-MONOMER
Genevestigator:P47924 GermOnline:AT5G64300 Uniprot:P47924
Length = 543
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 105/269 (39%), Positives = 172/269 (63%)
Query: 7 SSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEK 66
SS E I +++ G ++++VD E+RENEGD+++++ TP A+ F+ ++ G++C+++ E
Sbjct: 129 SSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKED 188
Query: 67 HCIQLKLDMMT--KKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDI 124
+L L +M K+N T FTV+++A +G TTG+SA DRA TI +S+ +KP D
Sbjct: 189 DLERLHLPLMVNQKENEEKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDF 248
Query: 125 VQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKF 184
+PGHIFPL+ ++GGVL R GHTEA DLT LAGL P V+CEI++DDG+MARLP L +F
Sbjct: 249 NRPGHIFPLKYREGGVLKRAGHTEASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREF 308
Query: 185 SKLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYG 244
+ +N+K+ +I++LI YR K + +++R + I T++G F Y ++ H+ ++ G
Sbjct: 309 AAENNLKVVSIADLIRYRRKRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKG 368
Query: 245 SINPNKIIPIWLNQQLSIFDFLHAKTSSC 273
I + I + ++ + D + C
Sbjct: 369 EIGDGQDILVRVHSECLTGDIFGSARCDC 397
>TIGR_CMR|CBU_0647 [details] [associations]
symbol:CBU_0647 "riboflavin biosynthesis protein RibA"
species:227377 "Coxiella burnetii RSA 493" [GO:0003935 "GTP
cyclohydrolase II activity" evidence=ISS] [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00179 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0005525 GO:GO:0046872 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 TIGRFAMs:TIGR00505
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652
RefSeq:NP_819677.2 PRIDE:Q83DP9 GeneID:1208532 KEGG:cbu:CBU_0647
PATRIC:17929973 OMA:NIDPFIS ProtClustDB:CLSK2401291
BioCyc:CBUR227377:GJ7S-644-MONOMER Uniprot:Q83DP9
Length = 387
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 111/231 (48%), Positives = 152/231 (65%)
Query: 21 MIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKN 80
MIILVD E+RENEGD+I++++ TP INFM+ Y RGLIC+ + +L + MMT +N
Sbjct: 1 MIILVDDESRENEGDLIIAAEHATPEHINFMTLYGRGLICLPMCSSDFERLNIPMMTSRN 60
Query: 81 NSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQPGHIFPLQAKKGGV 140
S + T F VSIEAA VTTGISA DRA TI++A +K+ P DI+ PGH+FPL+A GV
Sbjct: 61 GSRYETPFGVSIEAAYDVTTGISAHDRARTIQIAIDEKSTPEDIIMPGHMFPLKANDAGV 120
Query: 141 LIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSKLHNIKIGTISNLIC 200
L R GHTE DL +LAGL P+AV+CEILN DG+MARLPDL +K + + +I +LI
Sbjct: 121 LARAGHTEGSVDLCRLAGLKPAAVLCEILNKDGSMARLPDLQLLAKQFRLPLVSIQDLIT 180
Query: 201 YRYKYENIIKRKAEYNINTLY-GNFKIIVYIDKINNDIHLTLIYGSINPNK 250
YR +E +I +E + G F I + ++++ H+ L+ I +K
Sbjct: 181 YRINHETLIDEVSESLLPIKNRGRFTIKTFRSRVDHLEHVALVNQKIEEDK 231
>TAIR|locus:2041253 [details] [associations]
symbol:RIBA2 "homolog of ribA 2" species:3702
"Arabidopsis thaliana" [GO:0003935 "GTP cyclohydrolase II activity"
evidence=IEA;ISS] [GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate
synthase activity" evidence=IEA;ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0007623 "circadian rhythm" evidence=RCA]
HAMAP:MF_00180 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009231
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935
eggNOG:COG0108 GO:GO:0008686 TIGRFAMs:TIGR00506
HOGENOM:HOG000115440 KO:K14652 ProtClustDB:PLN02831 EMBL:BT011627
EMBL:BT012273 EMBL:AK228961 IPI:IPI00524240 RefSeq:NP_179831.2
UniGene:At.39435 HSSP:Q8TG90 ProteinModelPortal:Q6NLQ7 SMR:Q6NLQ7
STRING:Q6NLQ7 PaxDb:Q6NLQ7 PRIDE:Q6NLQ7 EnsemblPlants:AT2G22450.1
GeneID:816777 KEGG:ath:AT2G22450 TAIR:At2g22450 InParanoid:Q6NLQ7
OMA:VSVDFKH PhylomeDB:Q6NLQ7 Genevestigator:Q6NLQ7 Uniprot:Q6NLQ7
Length = 476
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 111/271 (40%), Positives = 179/271 (66%)
Query: 7 SSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEK 66
+S + I +++ G M+++VD E+RENEGD+I+++ TP A+ F+ K+ G++C+++ +
Sbjct: 107 ASIPQAIEDIRHGKMVVVVDDEDRENEGDLIMAASLATPEAMAFVVKHGTGIVCVSMKGE 166
Query: 67 HCIQLKLDMM-TKKNNSS-FGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDI 124
+L+L +M T+K+N T FTVS++A G +TG+SA DRA TI +SK +KP D
Sbjct: 167 DLERLELPLMVTRKDNEEKLRTAFTVSVDAKKGTSTGVSARDRAQTILTLASKDSKPEDF 226
Query: 125 VQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKF 184
+PGHIFPL+ ++GGVL R GHTEA DLT LAGL P +V+CEI++DDG+MARLP L +F
Sbjct: 227 NRPGHIFPLRYREGGVLKRAGHTEASVDLTVLAGLEPVSVLCEIVDDDGSMARLPRLRQF 286
Query: 185 SKLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDIHLTLIYG 244
++ +N+K+ +I++LI YR K E +++ A I T++G FK + ++ H+ ++ G
Sbjct: 287 AQENNLKLISIADLIRYRRKRERLVEFTAVAPIPTMWGPFKAHCFKSLLDGVEHIAMVKG 346
Query: 245 SINPNKIIPIWLNQQLSIFDFLHAKTSSCTQ 275
I K I + ++ + I D + +S Q
Sbjct: 347 EIGDGKDILVRVHAEC-ITDDIFGNSSGGKQ 376
>UNIPROTKB|P0A7J0 [details] [associations]
symbol:ribB "3,4-dihydroxy-2-butanone 4-phosphate synthase"
species:83333 "Escherichia coli K-12" [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0009231 "riboflavin biosynthetic process" evidence=IEA]
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=IEA;IDA] HAMAP:MF_00180 InterPro:IPR000422
Pfam:PF00926 UniPathway:UPA00275 GO:GO:0005829 GO:GO:0005886
GO:GO:0006950 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 EMBL:U28377 GO:GO:0009231
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
eggNOG:COG0108 KO:K02858 GO:GO:0008686 TIGRFAMs:TIGR00506
HOGENOM:HOG000115444 OMA:QMAKLIR EMBL:M64472 EMBL:M77129
EMBL:X66720 PIR:A38159 RefSeq:NP_417513.1 RefSeq:YP_491233.1
PDB:1G57 PDB:1G58 PDB:1IEZ PDBsum:1G57 PDBsum:1G58 PDBsum:1IEZ
ProteinModelPortal:P0A7J0 SMR:P0A7J0 DIP:DIP-35934N IntAct:P0A7J0
MINT:MINT-1239671 PaxDb:P0A7J0 PRIDE:P0A7J0
EnsemblBacteria:EBESCT00000001092 EnsemblBacteria:EBESCT00000017487
GeneID:12931678 GeneID:947526 KEGG:ecj:Y75_p2967 KEGG:eco:b3041
PATRIC:32121494 EchoBASE:EB0460 EcoGene:EG10465
ProtClustDB:PRK03353 BioCyc:EcoCyc:DIOHBUTANONEPSYN-MONOMER
BioCyc:ECOL316407:JW3009-MONOMER
BioCyc:MetaCyc:DIOHBUTANONEPSYN-MONOMER BRENDA:4.1.99.12
EvolutionaryTrace:P0A7J0 Genevestigator:P0A7J0 Uniprot:P0A7J0
Length = 217
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 94/194 (48%), Positives = 138/194 (71%)
Query: 13 ISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLK 72
++ L+ G ++++D E+RENEGD+I ++ +T + ++ G++C+ +TE QL
Sbjct: 20 LAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLD 79
Query: 73 LDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQPGHIFP 132
L MM + N S++GT FTV+IEAA GVTTG+SA+DR T++ A + AKPSD+ +PGH+FP
Sbjct: 80 LPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFP 139
Query: 133 LQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSKLHNIKI 192
L+A+ GGVL RGGHTEA DL LAG P+ V+CE+ NDDGTMAR P+ I+F+ HN+ +
Sbjct: 140 LRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMAL 199
Query: 193 GTISNLICYRYKYE 206
TI +L+ YR +E
Sbjct: 200 VTIEDLVAYRQAHE 213
>TIGR_CMR|ECH_0134 [details] [associations]
symbol:ECH_0134 "3,4-dihydroxy-2-butanone 4-phosphate
synthase" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISS] InterPro:IPR000422 Pfam:PF00926
UniPathway:UPA00275 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 eggNOG:COG0108 KO:K02858
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115444 OMA:QMAKLIR
RefSeq:YP_506962.1 ProteinModelPortal:Q2GHX1 STRING:Q2GHX1
GeneID:3927371 KEGG:ech:ECH_0134 PATRIC:20575809
ProtClustDB:CLSK749530 BioCyc:ECHA205920:GJNR-134-MONOMER
Uniprot:Q2GHX1
Length = 211
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 94/199 (47%), Positives = 137/199 (68%)
Query: 3 NKFISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMT 62
+ FIS + II + K G M IL+D E RENEGD+++ ++ VT INFM + G++C++
Sbjct: 9 SSFISPVEHIIEDSKQGKMFILIDDEQRENEGDLVVLAEKVTSGVINFMITHGSGIVCLS 68
Query: 63 LTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPS 122
+TE +L L+ + K++ + +F SI+A G+TTG+SA DRAHTI +K
Sbjct: 69 ITEDLMHKLGLEFIPKRHVNCNSASFATSIDARYGITTGVSAHDRAHTILTVVNKNVTED 128
Query: 123 DIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLI 182
D V PGHIFP+ +KKGGVL R GHTEA ++ ++AGL P AV+CE++N DGTM+R+PD+I
Sbjct: 129 DFVTPGHIFPIVSKKGGVLERSGHTEASVEIARIAGLAPVAVVCELMNPDGTMSRMPDII 188
Query: 183 KFSKLHNIKIGTISNLICY 201
+FS+ +NIK+ +I LI Y
Sbjct: 189 EFSQRYNIKVTSIDKLIQY 207
>UNIPROTKB|Q9KKP2 [details] [associations]
symbol:ribB "3,4-dihydroxy-2-butanone 4-phosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422
Pfam:PF00926 UniPathway:UPA00275 GO:GO:0046872 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 eggNOG:COG0108 KO:K02858
GO:GO:0008686 TIGRFAMs:TIGR00506 OMA:QMAKLIR PIR:B82384
RefSeq:NP_233442.1 ProteinModelPortal:Q9KKP2 SMR:Q9KKP2
DNASU:2612048 GeneID:2612048 KEGG:vch:VCA1060 PATRIC:20086638
ProtClustDB:PRK00910 Uniprot:Q9KKP2
Length = 218
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 93/201 (46%), Positives = 139/201 (69%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
I+ + + L+ G ++L+D E+RENEGDII + + +T + M + G++C+ LTE
Sbjct: 14 ITRVENALQALREGRGVLLLDDEDRENEGDIIYAVESLTTAQMALMIRECSGIVCLCLTE 73
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+L L M NNS+ T FTVSIEA +GVTTG+SA DR TIK A++ +AKP D+
Sbjct: 74 AQADRLALPPMVVNNNSANQTAFTVSIEAKHGVTTGVSAQDRVTTIKTAANPQAKPEDLA 133
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
+PGH+FPL+A+ GGVL R GHTE DL ++AGL P+ V+CE+ N DG+MA+ P++I+F
Sbjct: 134 RPGHVFPLRARAGGVLARRGHTEGTVDLMQMAGLQPAGVLCELTNPDGSMAKTPEIIEFG 193
Query: 186 KLHNIKIGTISNLICYRYKYE 206
KLHN+ + TI +++ YR +++
Sbjct: 194 KLHNMPVLTIEDMVQYRIQFD 214
>TIGR_CMR|VC_A1060 [details] [associations]
symbol:VC_A1060 "3,4-dihydroxy-2-butanone 4-phosphate
synthase" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422
Pfam:PF00926 UniPathway:UPA00275 GO:GO:0046872 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 eggNOG:COG0108 KO:K02858
GO:GO:0008686 TIGRFAMs:TIGR00506 OMA:QMAKLIR PIR:B82384
RefSeq:NP_233442.1 ProteinModelPortal:Q9KKP2 SMR:Q9KKP2
DNASU:2612048 GeneID:2612048 KEGG:vch:VCA1060 PATRIC:20086638
ProtClustDB:PRK00910 Uniprot:Q9KKP2
Length = 218
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 93/201 (46%), Positives = 139/201 (69%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
I+ + + L+ G ++L+D E+RENEGDII + + +T + M + G++C+ LTE
Sbjct: 14 ITRVENALQALREGRGVLLLDDEDRENEGDIIYAVESLTTAQMALMIRECSGIVCLCLTE 73
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
+L L M NNS+ T FTVSIEA +GVTTG+SA DR TIK A++ +AKP D+
Sbjct: 74 AQADRLALPPMVVNNNSANQTAFTVSIEAKHGVTTGVSAQDRVTTIKTAANPQAKPEDLA 133
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFS 185
+PGH+FPL+A+ GGVL R GHTE DL ++AGL P+ V+CE+ N DG+MA+ P++I+F
Sbjct: 134 RPGHVFPLRARAGGVLARRGHTEGTVDLMQMAGLQPAGVLCELTNPDGSMAKTPEIIEFG 193
Query: 186 KLHNIKIGTISNLICYRYKYE 206
KLHN+ + TI +++ YR +++
Sbjct: 194 KLHNMPVLTIEDMVQYRIQFD 214
>TIGR_CMR|APH_1332 [details] [associations]
symbol:APH_1332 "3,4-dihydroxy-2-butanone 4-phosphate
synthase" species:212042 "Anaplasma phagocytophilum HZ" [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] InterPro:IPR000422 Pfam:PF00926 UniPathway:UPA00275
GO:GO:0046872 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0009231
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
eggNOG:COG0108 KO:K02858 GO:GO:0008686 TIGRFAMs:TIGR00506
HOGENOM:HOG000115444 OMA:QMAKLIR ProtClustDB:CLSK749530
RefSeq:YP_505837.1 ProteinModelPortal:Q2GIG4 STRING:Q2GIG4
GeneID:3930706 KEGG:aph:APH_1332 PATRIC:20951468
BioCyc:APHA212042:GHPM-1332-MONOMER Uniprot:Q2GIG4
Length = 209
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 93/192 (48%), Positives = 133/192 (69%)
Query: 7 SSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEK 66
SS +E++ + G + +L+D E RENEGD++ +D V+P AIN M +Y G++C+ +E
Sbjct: 11 SSIEEVVRDAAEGKVFVLLDDEERENEGDLVALADRVSPEAINMMIRYGSGIVCLAFSEY 70
Query: 67 HCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQ 126
H +L L +M+++N + F SI+A +G+TTG+SASDRA TI A S + DIV
Sbjct: 71 HAKKLGLGLMSRRNANDGCPAFAESIDARHGITTGVSASDRAATILKAVSDDSSADDIVT 130
Query: 127 PGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSK 186
PGH+FP+ A GGVL RGGHTEAG D+ KLAG +AVICE++N DGTMARLP++++F+
Sbjct: 131 PGHVFPIVANPGGVLKRGGHTEAGVDIAKLAGAAHAAVICELMNPDGTMARLPEIMEFAS 190
Query: 187 LHNIKIGTISNL 198
+ IK+ TI L
Sbjct: 191 ANGIKVTTIKKL 202
>TIGR_CMR|CJE_0675 [details] [associations]
symbol:CJE_0675 "3,4-dihydroxy-2-butanone 4-phosphate
synthase" species:195099 "Campylobacter jejuni RM1221" [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0000287 GO:GO:0030145 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 eggNOG:COG0108
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115440 KO:K14652
OMA:VSVDFKH RefSeq:YP_178687.1 ProteinModelPortal:Q5HVJ8
STRING:Q5HVJ8 GeneID:3232003 KEGG:cjr:CJE0675 PATRIC:20043078
ProtClustDB:PRK09314 BioCyc:CJEJ195099:GJC0-692-MONOMER
Uniprot:Q5HVJ8
Length = 339
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 108/244 (44%), Positives = 158/244 (64%)
Query: 4 KFISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTL 63
KF+S ++ I +L+ G M+++VD+E+RENEGD+I + F T +NFM K ARG++C+ L
Sbjct: 2 KFVS-VEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEKVNFMIKEARGVVCVAL 60
Query: 64 TEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSD 123
E + +L +M KN S+ T FT++++A + TTG+SA +R TI++ + AK SD
Sbjct: 61 DETLAKKFELPLMVPKNTSNHETAFTITVDAKDA-TTGVSAYERNMTIQIFADDNAKASD 119
Query: 124 IVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIK 183
V+PGHI PL AKKGGVL R GHTE DL KLAGL + VICEI+ D+G MAR DL
Sbjct: 120 FVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACVICEIVKDNGDMARREDLEI 179
Query: 184 FSKLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDI-HLTLI 242
F + H++ + +S+LI YR K+E++IK + E + + L G FK +I +N H+
Sbjct: 180 FCQKHDLNMIAVSDLIEYRLKHESLIKLE-EKSQSVLAG-FKAEKFIFSDHNQTQHIAFC 237
Query: 243 YGSI 246
+ I
Sbjct: 238 FKDI 241
>UNIPROTKB|P0A5V0 [details] [associations]
symbol:ribBA "Riboflavin biosynthesis protein RibBA"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_01283 InterPro:IPR000422 InterPro:IPR000926
InterPro:IPR016299 Pfam:PF00925 Pfam:PF00926 PIRSF:PIRSF001259
UniPathway:UPA00275 GO:GO:0005525 GO:GO:0040007 GO:GO:0005576
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0046872 EMBL:BX842576 GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 GO:GO:0003935 TIGRFAMs:TIGR00505
eggNOG:COG0108 GO:GO:0008686 TIGRFAMs:TIGR00506
HOGENOM:HOG000115440 KO:K14652 OMA:LRCDCRM ProtClustDB:PRK09311
EMBL:AF001929 PIR:D70902 RefSeq:NP_215931.1 RefSeq:NP_335909.1
RefSeq:YP_006514795.1 ProteinModelPortal:P0A5V0 SMR:P0A5V0
PRIDE:P0A5V0 EnsemblBacteria:EBMYCT00000002121
EnsemblBacteria:EBMYCT00000070900 GeneID:13320004 GeneID:886694
GeneID:924514 KEGG:mtc:MT1458 KEGG:mtu:Rv1415 KEGG:mtv:RVBD_1415
PATRIC:18124976 TubercuList:Rv1415 Uniprot:P0A5V0
Length = 425
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 102/248 (41%), Positives = 155/248 (62%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
+ S + ++++ G +I++D E+RENEGD+I +++ TP + FM +Y G +C+ L
Sbjct: 4 LDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDG 63
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIV 125
C +L L M N GT +TV+++A NG+ TGISASDRA T+++ + + D
Sbjct: 64 AICDRLGLLPMYAVNQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFT 123
Query: 126 QPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILN--DDGTMARLPDLIK 183
+PGH+ PL+AK GGVL R GHTEA DL ++AGL P+ ICEI++ D+G+MA +L
Sbjct: 124 RPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRV 183
Query: 184 FSKLHNIKIGTISNLICYRYKYENIIKRKAEYNINTLYGNFKIIVYIDKINNDI-HLTLI 242
F+ H + + TI++LI +R K+E I+R AE I T +G F+ I Y I D+ H+ L+
Sbjct: 184 FADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGEFRAIGYTS-IYEDVEHVALV 242
Query: 243 YGSI-NPN 249
G I PN
Sbjct: 243 RGEIAGPN 250
>TIGR_CMR|SO_0142 [details] [associations]
symbol:SO_0142 "3,4-dihydroxy-2-butanone 4-phosphate
synthase" species:211586 "Shewanella oneidensis MR-1" [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00180 InterPro:IPR000422 Pfam:PF00926
UniPathway:UPA00275 GO:GO:0046872 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 eggNOG:COG0108 KO:K02858
GO:GO:0008686 TIGRFAMs:TIGR00506 HOGENOM:HOG000115444 OMA:QMAKLIR
ProtClustDB:PRK03353 RefSeq:NP_715784.1 ProteinModelPortal:Q8EKF2
SMR:Q8EKF2 GeneID:1168036 KEGG:son:SO_0142 PATRIC:23519971
Uniprot:Q8EKF2
Length = 217
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 91/190 (47%), Positives = 134/190 (70%)
Query: 13 ISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLK 72
++ L+ G +++VD E+RENEGD+I +++ +T + + + G++C+ L ++ L
Sbjct: 20 LNALRQGLGVLVVDDEDRENEGDLIFAAESLTNAQMAMLIRECSGIVCLCLPDEKVKALA 79
Query: 73 LDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQPGHIFP 132
L M + N+S +GT FTVSIEA GVTTG+SA+DR TIK A + AKPSD+ +PGH++P
Sbjct: 80 LPPMVENNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKTAIADHAKPSDLARPGHVYP 139
Query: 133 LQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIKFSKLHNIKI 192
L+A+ GGVL R GHTE DL +LAGL P+ V+CE+ N DGTMARLP++I F LHN+ +
Sbjct: 140 LRAQPGGVLTRRGHTEGTIDLMQLAGLKPAGVLCEVTNPDGTMARLPEIIAFGALHNMPV 199
Query: 193 GTISNLICYR 202
TI +++ YR
Sbjct: 200 LTIEDIVVYR 209
>CGD|CAL0003526 [details] [associations]
symbol:RIB3 species:5476 "Candida albicans" [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=IDA] [GO:0009231 "riboflavin biosynthetic process"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0009060 "aerobic respiration"
evidence=IEA] InterPro:IPR000422 Pfam:PF00926 UniPathway:UPA00275
GO:GO:0046872 GO:GO:0009231 Gene3D:3.90.870.10 InterPro:IPR017945
SUPFAM:SSF55821 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716297.1 RefSeq:XP_716359.1 PDB:1TKS PDB:1TKU PDB:2RIS
PDB:2RIU PDBsum:1TKS PDBsum:1TKU PDBsum:2RIS PDBsum:2RIU
ProteinModelPortal:Q5A3V6 SMR:Q5A3V6 STRING:Q5A3V6 GeneID:3641955
GeneID:3642062 KEGG:cal:CaO19.12693 KEGG:cal:CaO19.5228
eggNOG:COG0108 KO:K02858 EvolutionaryTrace:Q5A3V6 GO:GO:0008686
TIGRFAMs:TIGR00506 Uniprot:Q5A3V6
Length = 204
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 86/202 (42%), Positives = 128/202 (63%)
Query: 1 MYNKFISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLIC 60
M N F + +E + K G +I++D E+RENEGD+I++++ +T + F+ +Y+ G +C
Sbjct: 1 MTNIF-TPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVC 59
Query: 61 MTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAK 120
+ L+E+ QL+L M + GT +T++ + A G TTGISA DRA T + ++ +K
Sbjct: 60 VPLSEERANQLELPPMLANRSDRHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSK 119
Query: 121 PSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILND-DGTMARLP 179
P D ++PGHI PL+A G + R GHTEA L+ LAGL P+ VICE++ D DG M RL
Sbjct: 120 PQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLD 179
Query: 180 DLIKFSKLHNIKIGTISNLICY 201
D I+F K H IKI I+ L+ Y
Sbjct: 180 DCIQFGKKHGIKIININQLVEY 201
>UNIPROTKB|Q5A3V6 [details] [associations]
symbol:RIB3 "3,4-dihydroxy-2-butanone 4-phosphate synthase"
species:237561 "Candida albicans SC5314" [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=IDA] [GO:0009231 "riboflavin biosynthetic process"
evidence=IDA] InterPro:IPR000422 Pfam:PF00926 UniPathway:UPA00275
GO:GO:0046872 GO:GO:0009231 Gene3D:3.90.870.10 InterPro:IPR017945
SUPFAM:SSF55821 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716297.1 RefSeq:XP_716359.1 PDB:1TKS PDB:1TKU PDB:2RIS
PDB:2RIU PDBsum:1TKS PDBsum:1TKU PDBsum:2RIS PDBsum:2RIU
ProteinModelPortal:Q5A3V6 SMR:Q5A3V6 STRING:Q5A3V6 GeneID:3641955
GeneID:3642062 KEGG:cal:CaO19.12693 KEGG:cal:CaO19.5228
eggNOG:COG0108 KO:K02858 EvolutionaryTrace:Q5A3V6 GO:GO:0008686
TIGRFAMs:TIGR00506 Uniprot:Q5A3V6
Length = 204
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 86/202 (42%), Positives = 128/202 (63%)
Query: 1 MYNKFISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLIC 60
M N F + +E + K G +I++D E+RENEGD+I++++ +T + F+ +Y+ G +C
Sbjct: 1 MTNIF-TPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVC 59
Query: 61 MTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAK 120
+ L+E+ QL+L M + GT +T++ + A G TTGISA DRA T + ++ +K
Sbjct: 60 VPLSEERANQLELPPMLANRSDRHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSK 119
Query: 121 PSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILND-DGTMARLP 179
P D ++PGHI PL+A G + R GHTEA L+ LAGL P+ VICE++ D DG M RL
Sbjct: 120 PQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLD 179
Query: 180 DLIKFSKLHNIKIGTISNLICY 201
D I+F K H IKI I+ L+ Y
Sbjct: 180 DCIQFGKKHGIKIININQLVEY 201
>POMBASE|SPBC23E6.06c [details] [associations]
symbol:SPBC23E6.06c "3,4-dihydroxy-2-butanone
4-phosphate synthase (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0005634 "nucleus" evidence=IDA] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS;IDA] [GO:0008686
"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000422 Pfam:PF00926 UniPathway:UPA00275
PomBase:SPBC23E6.06c GO:GO:0005829 GO:GO:0005634 GO:GO:0005758
GO:GO:0046872 EMBL:CU329671 GO:GO:0009231 Gene3D:3.90.870.10
InterPro:IPR017945 SUPFAM:SSF55821 eggNOG:COG0108 KO:K02858
GO:GO:0008686 TIGRFAMs:TIGR00506 OrthoDB:EOG4NCQP1 PIR:T39940
RefSeq:NP_596606.1 ProteinModelPortal:O60181 SMR:O60181
STRING:O60181 PRIDE:O60181 EnsemblFungi:SPBC23E6.06c.1
GeneID:2540577 KEGG:spo:SPBC23E6.06c HOGENOM:HOG000115444
OMA:QMAKLIR NextBio:20801702 Uniprot:O60181
Length = 204
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 82/198 (41%), Positives = 124/198 (62%)
Query: 6 ISSTKEIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
++S +E +++ + G +I++D E RENEGD+I++ VT + F+ +++ G +C+ +T
Sbjct: 2 LASIEEAVNDFRDGKFLIVLDDETRENEGDLIIAGCKVTTEQMAFLVRHSSGYVCVPMTG 61
Query: 66 KHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIK-VASSKKAKPSDI 124
+ L++ MM N T + V+++ ANG TTGISA DRA T + +A+ + P +
Sbjct: 62 ERLDSLEIPMMVDNNEDRMRTAYAVTLDYANGTTTGISAHDRALTTRQLANPEVTSPREF 121
Query: 125 VQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILND-DGTMARLPDLIK 183
+PGHI PL+A+ GGVL R GHTEA DL KLAGL P ICE++ + DG M+R D I
Sbjct: 122 NRPGHIVPLRARDGGVLERDGHTEAAVDLCKLAGLPPVGAICELVREEDGLMSRFDDCIS 181
Query: 184 FSKLHNIKIGTISNLICY 201
F K IK+ TI +L Y
Sbjct: 182 FGKKWGIKVITIESLKSY 199
>TIGR_CMR|NSE_0649 [details] [associations]
symbol:NSE_0649 "3,4-dihydroxy-2-butanone 4-phosphate
synthase" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISS] InterPro:IPR000422 Pfam:PF00926
GO:GO:0046872 GO:GO:0009231 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
eggNOG:COG0108 GO:GO:0008686 HOGENOM:HOG000115444 KO:K14652
RefSeq:YP_506527.1 ProteinModelPortal:Q2GDB9 STRING:Q2GDB9
GeneID:3931973 KEGG:nse:NSE_0649 PATRIC:22681323 OMA:ESSNVAR
ProtClustDB:CLSK2527710 BioCyc:NSEN222891:GHFU-663-MONOMER
Uniprot:Q2GDB9
Length = 210
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 76/198 (38%), Positives = 123/198 (62%)
Query: 7 SSTKEIISELKIGNM-IILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTE 65
S+ +E+I +LK N +LVDS +RENEGDI++ +T +NF+ + RGL C+ +T+
Sbjct: 3 STVEEVIHQLKERNKPFVLVDSSDRENEGDIVVPVQILTSEIMNFVVTHCRGLPCVCVTK 62
Query: 66 KHCIQLKLDMMTKKNN--SSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSD 123
C +L LD++ + ++ SS F +IEA GV+TGIS DR T+++ ++
Sbjct: 63 SLCEKLGLDLIKRSDSCESSNVARFVTTIEAKEGVSTGISVRDRVRTMRLLANDNVDKDS 122
Query: 124 IVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARLPDLIK 183
V PGH+FPL ++GG+++R GHTE +LAG +++CEIL++ G ARLP L
Sbjct: 123 FVSPGHVFPLMIEEGGLMVRSGHTEGAATFARLAGFKSESMLCEILDEAGDAARLPYLTD 182
Query: 184 FSKLHNIKIGTISNLICY 201
F++ +++ + +I LI Y
Sbjct: 183 FARKYDLCLTSIDLLITY 200
>SGD|S000002895 [details] [associations]
symbol:RIB3 "3,4-dihydroxy-2-butanone-4-phosphate synthase
(DHBP synthase)" species:4932 "Saccharomyces cerevisiae"
[GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase
activity" evidence=IEA;IMP] [GO:0009231 "riboflavin biosynthetic
process" evidence=IEA;IMP] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0009060 "aerobic respiration" evidence=IMP]
[GO:0005758 "mitochondrial intermembrane space" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000422 Pfam:PF00926 UniPathway:UPA00275
SGD:S000002895 GO:GO:0005829 GO:GO:0005758 GO:GO:0046872
EMBL:BK006938 GO:GO:0009060 GO:GO:0009231 EMBL:U33050
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
eggNOG:COG0108 KO:K02858 GO:GO:0008686 TIGRFAMs:TIGR00506
OrthoDB:EOG4NCQP1 HOGENOM:HOG000115444 OMA:QMAKLIR EMBL:Z21619
EMBL:AY557810 PIR:S50973 RefSeq:NP_010775.1
ProteinModelPortal:Q99258 SMR:Q99258 DIP:DIP-4316N IntAct:Q99258
MINT:MINT-477205 STRING:Q99258 PaxDb:Q99258 PeptideAtlas:Q99258
EnsemblFungi:YDR487C GeneID:852098 KEGG:sce:YDR487C CYGD:YDR487c
NextBio:970439 Genevestigator:Q99258 GermOnline:YDR487C
Uniprot:Q99258
Length = 208
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 82/204 (40%), Positives = 119/204 (58%)
Query: 11 EIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQ 70
+ I K +I++D RENEGD+I +++ V+ + F+ +++ G +C +T + I
Sbjct: 7 QAIEHFKQNKFVIVMDDAGRENEGDLICAAENVSTEQMAFLVRHSSGYVCAPMT--NAIA 64
Query: 71 LKLDMMTKKNNSSF--------GTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPS 122
KLD+ + F GT +T++++ A G TTGISA DR+ T + + + P
Sbjct: 65 DKLDLPLLRTGMKFESNDDDRHGTAYTITVDVAQGTTTGISAHDRSMTCRALADSSSTPK 124
Query: 123 DIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDD--GTMARLPD 180
++PGHI PL+A GGVL R GHTEAG DL KL+GL+P AVI E++NDD GTM RL D
Sbjct: 125 SFLKPGHICPLRAADGGVLQRRGHTEAGVDLCKLSGLSPVAVIGELVNDDEQGTMMRLND 184
Query: 181 LIKFSKLHNIKIGTISNLICYRYK 204
F K H I + +I L Y K
Sbjct: 185 CQAFGKKHGIPLISIEELAQYLKK 208
>UNIPROTKB|Q8TG90 [details] [associations]
symbol:RIB3 "3,4-dihydroxy-2-butanone 4-phosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000422 Pfam:PF00926
UniPathway:UPA00275 EMBL:CM001235 GO:GO:0046872 GO:GO:0009231
Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
eggNOG:COG0108 KO:K02858 GO:GO:0008686 TIGRFAMs:TIGR00506
EMBL:AF430214 RefSeq:XP_003717890.1 PDB:1K49 PDB:1K4I PDB:1K4L
PDB:1K4O PDB:1K4P PDBsum:1K49 PDBsum:1K4I PDBsum:1K4L PDBsum:1K4O
PDBsum:1K4P ProteinModelPortal:Q8TG90 SMR:Q8TG90 STRING:Q8TG90
EnsemblFungi:MGG_01049T0 GeneID:2674307 KEGG:mgr:MGG_01049
OrthoDB:EOG4NCQP1 EvolutionaryTrace:Q8TG90 Uniprot:Q8TG90
Length = 233
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 80/208 (38%), Positives = 124/208 (59%)
Query: 11 EIISELKIGNMIILVDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQ 70
++I K G ++++D +RENE D+I++++ VT + FM +++ GLIC LT +
Sbjct: 17 DVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTA 76
Query: 71 LKLDMMTKKNNSSFGTNFTVSIEAAN-GVTTGISASDRAHTIKVASSKKAKPSDIVQPGH 129
L L M N GT +TVS++A + TTGISA DRA ++ ++ A+PS +PGH
Sbjct: 77 LDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGH 136
Query: 130 IFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILND----DGTMARL-PDLIK- 183
+FPL+A GGV R GHTEAG +L +LAG P AVI EI++D +G R P +++
Sbjct: 137 VFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRG 196
Query: 184 -----FSKLHNIKIGTISNLICYRYKYE 206
F++ +K+ TI ++I + K E
Sbjct: 197 DECVAFARRWGLKVCTIEDMIAHVEKTE 224
>TIGR_CMR|CPS_1532 [details] [associations]
symbol:CPS_1532 "transcription termination/antitermination
factor NusB" species:167879 "Colwellia psychrerythraea 34H"
[GO:0006353 "DNA-dependent transcription, termination"
evidence=ISS] HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605
Pfam:PF01029 GO:GO:0006355 GO:GO:0003723 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006353 eggNOG:COG0781 KO:K03625
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 RefSeq:YP_268274.1 HSSP:Q9X286
ProteinModelPortal:Q485J1 SMR:Q485J1 STRING:Q485J1 GeneID:3519785
KEGG:cps:CPS_1532 PATRIC:21466271 HOGENOM:HOG000281868 OMA:IPYKVVI
BioCyc:CPSY167879:GI48-1613-MONOMER Uniprot:Q485J1
Length = 138
Score = 254 (94.5 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 53/133 (39%), Positives = 81/133 (60%)
Query: 388 TPRHRAREFALQGIYQWLFNNMDVNLIET-YIKEISNFYKVDKKYFYLILRGVINDINFL 446
+PR +ARE A+Q +Y W + VN IE +I + S + D +YF L+LRGV +I +
Sbjct: 4 SPRRKARELAVQAVYSWQVSKNPVNDIEVNFIADNSK-RRFDIEYFQLLLRGVTTNIGSI 62
Query: 447 RYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYKY 506
+ +DR ++++ +E +L + +ELK +PY+V+INEAIEL KSF D +K+
Sbjct: 63 DEAIIPYVDRPLDDIDQVEKAILRVAVFELKDCTDVPYRVVINEAIELAKSFAADDSHKF 122
Query: 507 VNKILDKVALNIR 519
VN +LDK IR
Sbjct: 123 VNGVLDKTVKLIR 135
>TIGR_CMR|CBU_1417 [details] [associations]
symbol:CBU_1417 "N utilization substance protein B"
species:227377 "Coxiella burnetii RSA 493" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0006353 eggNOG:COG0781 KO:K03625 OMA:TEYVEIA
ProtClustDB:PRK00202 Gene3D:1.10.940.10 PANTHER:PTHR11078
SUPFAM:SSF48013 TIGRFAMs:TIGR01951 HOGENOM:HOG000281868
RefSeq:NP_820401.1 ProteinModelPortal:Q83BT5 GeneID:1209323
KEGG:cbu:CBU_1417 PATRIC:17931587
BioCyc:CBUR227377:GJ7S-1404-MONOMER Uniprot:Q83BT5
Length = 138
Score = 246 (91.7 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 53/134 (39%), Positives = 78/134 (58%)
Query: 386 NKTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINF 445
NKT RH AR +ALQ +YQW F + + + E + D YF ++ G I +
Sbjct: 3 NKT-RHNARRYALQALYQWFFCETKPDALISQFMEEHDLSDTDVAYFKEVVTGTIQHVAI 61
Query: 446 LRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYK 505
+ ++ +DR I+ L+ +E VL + YEL ++PYKV+I+EA+ELVK FG G+K
Sbjct: 62 IDELMTAHLDRKISALNPVELSVLRLSIYELLHRKEVPYKVVIDEALELVKEFGAEAGHK 121
Query: 506 YVNKILDKVALNIR 519
YVN ILD ++ IR
Sbjct: 122 YVNAILDVLSSEIR 135
>UNIPROTKB|P0A780 [details] [associations]
symbol:nusB "transcription antitermination protein NusB"
species:83333 "Escherichia coli K-12" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003723 EMBL:U82664 GO:GO:0006353
EMBL:X64395 eggNOG:COG0781 KO:K03625 OMA:TEYVEIA
ProtClustDB:PRK00202 Gene3D:1.10.940.10 PANTHER:PTHR11078
SUPFAM:SSF48013 TIGRFAMs:TIGR01951 HOGENOM:HOG000281868 EMBL:X00681
EMBL:M26839 PIR:I51822 RefSeq:NP_414950.1 RefSeq:YP_488708.1
PDB:1EY1 PDB:3D3B PDB:3D3C PDB:3IMQ PDBsum:1EY1 PDBsum:3D3B
PDBsum:3D3C PDBsum:3IMQ ProteinModelPortal:P0A780 SMR:P0A780
DIP:DIP-48254N IntAct:P0A780 MINT:MINT-1220894 PRIDE:P0A780
EnsemblBacteria:EBESCT00000001949 EnsemblBacteria:EBESCT00000016204
GeneID:12930840 GeneID:945054 KEGG:ecj:Y75_p0404 KEGG:eco:b0416
PATRIC:32115981 EchoBASE:EB0660 EcoGene:EG10666
BioCyc:EcoCyc:EG10666-MONOMER BioCyc:ECOL316407:JW0406-MONOMER
EvolutionaryTrace:P0A780 Genevestigator:P0A780 Uniprot:P0A780
Length = 139
Score = 236 (88.1 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 54/130 (41%), Positives = 71/130 (54%)
Query: 390 RHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYD 449
R RARE A+Q +Y W + D+ +E + VD YF +L GV + +L
Sbjct: 6 RRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGL 65
Query: 450 LSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYKYVNK 509
+ + R + EL +E VL I YEL +PYKV INEAIEL KSFG D +K+VN
Sbjct: 66 MKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNG 125
Query: 510 ILDKVALNIR 519
+LDK A IR
Sbjct: 126 VLDKAAPVIR 135
>TIGR_CMR|CJE_0432 [details] [associations]
symbol:CJE_0432 "6,7-dimethyl-8-ribityllumazine synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:YP_178451.1
HSSP:O66529 ProteinModelPortal:Q5HW84 SMR:Q5HW84 STRING:Q5HW84
GeneID:3231194 KEGG:cjr:CJE0432 PATRIC:20042564 OMA:IVSMESA
BioCyc:CJEJ195099:GJC0-437-MONOMER Uniprot:Q5HW84
Length = 154
Score = 215 (80.7 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 41/91 (45%), Positives = 61/91 (67%)
Query: 290 NGAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNI 349
+G +E+N+ I VPGA E+P ALK I+ KKF+ + +G +IRG T HF+ ++ ET I
Sbjct: 42 HGGKEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGI 101
Query: 350 MQISIKNNIPIINAILTTETIEQANSRILTK 380
+S+ +NIP+ +LTT+TIEQA R +K
Sbjct: 102 ANVSLNHNIPVSFGVLTTDTIEQAIERAGSK 132
>UNIPROTKB|Q9KPU5 [details] [associations]
symbol:nusB "N utilization substance protein B homolog"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006353 "DNA-dependent transcription, termination"
evidence=ISS] HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605
Pfam:PF01029 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 GO:GO:0006353 eggNOG:COG0781 KO:K03625
ProtClustDB:PRK00202 Gene3D:1.10.940.10 PANTHER:PTHR11078
SUPFAM:SSF48013 TIGRFAMs:TIGR01951 OMA:IPYKVVI PIR:B82098
RefSeq:NP_231898.1 ProteinModelPortal:Q9KPU5 SMR:Q9KPU5
DNASU:2613189 GeneID:2613189 KEGG:vch:VC2267 PATRIC:20083575
Uniprot:Q9KPU5
Length = 156
Score = 198 (74.8 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 52/144 (36%), Positives = 73/144 (50%)
Query: 390 RHRAREFALQGIYQWLFNNMDVNLIET-------YIKEISNFYK-------VDKKYFYLI 435
R AR+FALQ IY W +V IE Y +E + D YF +
Sbjct: 10 RRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVSYFRDL 69
Query: 436 LRGVINDINFLRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELV 495
L GV+ + N L L + R + +L +E +L + YE+ +PYKV+INEAIEL
Sbjct: 70 LAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELA 129
Query: 496 KSFGNIDGYKYVNKILDKVALNIR 519
K F D +K+VN +LDK A ++R
Sbjct: 130 KVFAAEDSHKFVNGVLDKAAPHVR 153
>TIGR_CMR|VC_2267 [details] [associations]
symbol:VC_2267 "N utilization substance protein B"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723
GO:GO:0006353 eggNOG:COG0781 KO:K03625 ProtClustDB:PRK00202
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 OMA:IPYKVVI PIR:B82098 RefSeq:NP_231898.1
ProteinModelPortal:Q9KPU5 SMR:Q9KPU5 DNASU:2613189 GeneID:2613189
KEGG:vch:VC2267 PATRIC:20083575 Uniprot:Q9KPU5
Length = 156
Score = 198 (74.8 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 52/144 (36%), Positives = 73/144 (50%)
Query: 390 RHRAREFALQGIYQWLFNNMDVNLIET-------YIKEISNFYK-------VDKKYFYLI 435
R AR+FALQ IY W +V IE Y +E + D YF +
Sbjct: 10 RRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVSYFRDL 69
Query: 436 LRGVINDINFLRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELV 495
L GV+ + N L L + R + +L +E +L + YE+ +PYKV+INEAIEL
Sbjct: 70 LAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELA 129
Query: 496 KSFGNIDGYKYVNKILDKVALNIR 519
K F D +K+VN +LDK A ++R
Sbjct: 130 KVFAAEDSHKFVNGVLDKAAPHVR 153
>TIGR_CMR|SO_3465 [details] [associations]
symbol:SO_3465 "N utilization substance protein B"
species:211586 "Shewanella oneidensis MR-1" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0006353 eggNOG:COG0781 KO:K03625 ProtClustDB:PRK00202
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 HOGENOM:HOG000281868 OMA:IPYKVVI
RefSeq:NP_719014.1 ProteinModelPortal:Q8EBP4 SMR:Q8EBP4
GeneID:1171141 KEGG:son:SO_3465 PATRIC:23526626 Uniprot:Q8EBP4
Length = 134
Score = 195 (73.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 44/125 (35%), Positives = 68/125 (54%)
Query: 390 RHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYD 449
R +AR A+Q IY W + ++ +E + VD YF + GV L
Sbjct: 6 RRKARRLAVQAIYSWQLSGNNIADVEHEFLTEQSLDGVDVAYFRELFAGVATKKTQLDEL 65
Query: 450 LSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYKYVNK 509
+ +DR I+E+S +E ++ + YEL +P+KV INEAIEL K+FG + +K+VN
Sbjct: 66 IIPHLDRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINEAIELAKAFGADESHKFVNG 125
Query: 510 ILDKV 514
+LDK+
Sbjct: 126 LLDKL 130
>TIGR_CMR|BA_4334 [details] [associations]
symbol:BA_4334 "6,7-dimethyl-8-ribityllumazine synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016740
GO:GO:0009231 eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794
GO:GO:0009349 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI RefSeq:NP_846567.1
RefSeq:YP_020980.1 RefSeq:YP_030271.1 PDB:1VSW PDB:1VSX PDB:3JV8
PDBsum:1VSW PDBsum:1VSX PDBsum:3JV8 ProteinModelPortal:Q81MB5
SMR:Q81MB5 DNASU:1087551 EnsemblBacteria:EBBACT00000008556
EnsemblBacteria:EBBACT00000015171 EnsemblBacteria:EBBACT00000022183
GeneID:1087551 GeneID:2815209 GeneID:2850962 KEGG:ban:BA_4334
KEGG:bar:GBAA_4334 KEGG:bat:BAS4021 ProtClustDB:PRK00061
BioCyc:BANT260799:GJAJ-4078-MONOMER
BioCyc:BANT261594:GJ7F-4218-MONOMER Uniprot:Q81MB5
Length = 153
Score = 194 (73.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 38/91 (41%), Positives = 57/91 (62%)
Query: 290 NGAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNI 349
+G +E +I VPGA EIPL K + K++ +I +G +IRG T H++ + NE +
Sbjct: 40 HGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGV 99
Query: 350 MQISIKNNIPIINAILTTETIEQANSRILTK 380
+S++ +IP+I +LTTETIEQA R TK
Sbjct: 100 ASLSLQTDIPVIFGVLTTETIEQAIERAGTK 130
>TIGR_CMR|SO_3466 [details] [associations]
symbol:SO_3466 "6,7-dimethyl-8-ribityllumazine synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:NP_719015.1
ProteinModelPortal:Q8EBP3 SMR:Q8EBP3 GeneID:1171142
KEGG:son:SO_3466 PATRIC:23526628 Uniprot:Q8EBP3
Length = 158
Score = 190 (71.9 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 37/87 (42%), Positives = 59/87 (67%)
Query: 294 EKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQIS 353
++NI + VPGA+E+PLA + + KF+ +IA+G +IRG T HF+ +A E + QI+
Sbjct: 46 DENITVVRVPGAVELPLAARRVAASGKFDGIIALGAVIRGGTPHFDFVAGECNKGLAQIA 105
Query: 354 IKNNIPIINAILTTETIEQANSRILTK 380
++ ++P+ +LTT+TIEQA R TK
Sbjct: 106 LEFDLPVAFGVLTTDTIEQAIERSGTK 132
>UNIPROTKB|P61714 [details] [associations]
symbol:ribE "RibE" species:83333 "Escherichia coli K-12"
[GO:0009349 "riboflavin synthase complex" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0009231 "riboflavin
biosynthetic process" evidence=IEA] [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=IDA]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016740 EMBL:U82664 GO:GO:0009231
EMBL:X64395 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 BRENDA:2.5.1.9 ProtClustDB:PRK00061 PIR:S26202
RefSeq:NP_414949.1 RefSeq:YP_488707.1 ProteinModelPortal:P61714
SMR:P61714 IntAct:P61714 MINT:MINT-1225919 SWISS-2DPAGE:P61714
PaxDb:P61714 PRIDE:P61714 EnsemblBacteria:EBESCT00000003525
EnsemblBacteria:EBESCT00000014873 GeneID:12930511 GeneID:946453
KEGG:ecj:Y75_p0403 KEGG:eco:b0415 PATRIC:32115979 EchoBASE:EB1298
EcoGene:EG11322 HOGENOM:HOG000229250 OMA:TALEMVS
BioCyc:EcoCyc:LUMAZINESYN-MONOMER BioCyc:ECOL316407:JW0405-MONOMER
BioCyc:MetaCyc:LUMAZINESYN-MONOMER Genevestigator:P61714
Uniprot:P61714
Length = 156
Score = 173 (66.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 293 QEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQI 352
+++NI + VPGA E+PLA + + K++ +IA+G +IRG T HFE +A + + +
Sbjct: 45 KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHV 104
Query: 353 SIKNNIPIINAILTTETIEQANSRILTK 380
+ + IP+ +LTTE+IEQA R TK
Sbjct: 105 AQDSEIPVAFGVLTTESIEQAIERAGTK 132
Score = 39 (18.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 214 EYNINTLYGNFKIIVYIDKINNDIHLTLIYGSINPNKII 252
E N+ T + ++ + I + NN I+ +L+ G+I+ K I
Sbjct: 5 EANVAT--PDARVAITIARFNNFINDSLLEGAIDALKRI 41
>TIGR_CMR|GSU_1691 [details] [associations]
symbol:GSU_1691 "6,7-dimethyl-8-ribityllumazine synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009231
eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794 GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI ProtClustDB:PRK00061
RefSeq:NP_952742.1 ProteinModelPortal:P61723 SMR:P61723
GeneID:2687086 KEGG:gsu:GSU1691 PATRIC:22026231
BioCyc:GSUL243231:GH27-1721-MONOMER Uniprot:P61723
Length = 155
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 290 NGAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNI 349
+G + +I + VPGA EIPL + ++Q ++ +I +G +IRG T HF+ +A E I
Sbjct: 42 HGGDDGDIDVVRVPGAFEIPLTAQKLVQKGNYDAVICLGAVIRGSTPHFDYVAAEVSKGI 101
Query: 350 MQISIKNNIPIINAILTTETIEQANSRILTK 380
+S+ +P++ +LTT+TIEQA R TK
Sbjct: 102 AHVSLATGVPVVFGVLTTDTIEQAIERAGTK 132
>TIGR_CMR|VC_2268 [details] [associations]
symbol:VC_2268 "6,7-dimethyl-8-ribityllumazine synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 OMA:TLAMIET GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 PIR:C82098
RefSeq:NP_231899.2 ProteinModelPortal:Q9KPU4 SMR:Q9KPU4
DNASU:2613190 GeneID:2613190 KEGG:vch:VC2268 PATRIC:20083577
Uniprot:Q9KPU4
Length = 156
Score = 163 (62.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 29/87 (33%), Positives = 55/87 (63%)
Query: 294 EKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQIS 353
+ NI + PGA+E+PL + + + ++ ++++G +IRG T HF+ + +E + Q+S
Sbjct: 46 DDNITVVRCPGAVELPLVAQRVAKTGDYDAIVSLGCVIRGGTPHFDYVCSEMNKGLAQVS 105
Query: 354 IKNNIPIINAILTTETIEQANSRILTK 380
++ +IP+ +LT +TI+QA R TK
Sbjct: 106 LEFSIPVAFGVLTVDTIDQAIERAGTK 132
Score = 44 (20.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 223 NFKIIVYIDKINNDIHLTLIYGSINPNK 250
N KI + I + N+ I+ +L+ G+I+ K
Sbjct: 12 NAKIAIVISRFNSFINESLLSGAIDTLK 39
>TIGR_CMR|CPS_1531 [details] [associations]
symbol:CPS_1531 "6,7-dimethyl-8-ribityllumazine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] HAMAP:MF_00178
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:YP_268273.1
HSSP:Q9UUB1 ProteinModelPortal:Q485J2 SMR:Q485J2 STRING:Q485J2
GeneID:3519446 KEGG:cps:CPS_1531 PATRIC:21466269
BioCyc:CPSY167879:GI48-1612-MONOMER Uniprot:Q485J2
Length = 154
Score = 179 (68.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 35/87 (40%), Positives = 58/87 (66%)
Query: 294 EKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQIS 353
+++I + VPGA E+PLA K I + + + +IAIG +IRG T HF+ +A E+ + Q+
Sbjct: 46 DEDITIVRVPGAYELPLAAKKIAKKGEADAIIAIGAVIRGGTPHFDFVAGESNKGLAQVC 105
Query: 354 IKNNIPIINAILTTETIEQANSRILTK 380
+++ IP+ ++TT++IEQA R TK
Sbjct: 106 LESEIPVSFGVITTDSIEQAIERAGTK 132
>TIGR_CMR|CHY_1472 [details] [associations]
symbol:CHY_1472 "6,7-dimethyl-8-ribityllumazine synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0016740 GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI HOGENOM:HOG000229249
RefSeq:YP_360304.1 ProteinModelPortal:Q3AC30 SMR:Q3AC30
STRING:Q3AC30 GeneID:3727825 KEGG:chy:CHY_1472 PATRIC:21276075
BioCyc:CHYD246194:GJCN-1471-MONOMER Uniprot:Q3AC30
Length = 152
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 293 QEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQI 352
+ NI I VPGA EIPL K + K ++ +I +G +IRG T HF+ +A E I +
Sbjct: 44 ENTNIDVIWVPGAFEIPLVAKRAVH-KDYDAIICLGAVIRGATPHFDYVAAEVAKGIAAV 102
Query: 353 SIKNNIPIINAILTTETIEQANSRILTK 380
++ N P+I +LTT+TIEQA R TK
Sbjct: 103 GLEANKPVIFGVLTTDTIEQAIERAGTK 130
>TIGR_CMR|CBU_0648 [details] [associations]
symbol:CBU_0648 "6,7-dimethyl-8-ribityllumazine synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:NP_819678.1
ProteinModelPortal:Q83DP8 PRIDE:Q83DP8 GeneID:1208533
KEGG:cbu:CBU_0648 PATRIC:17929975
BioCyc:CBUR227377:GJ7S-645-MONOMER Uniprot:Q83DP8
Length = 151
Score = 169 (64.5 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 291 GAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIM 350
G Q I + VPGA+EIPL K + + K + ++ +G +IRGET H+ + +
Sbjct: 35 GVQANQIKTVWVPGAVEIPLLAKRLAKSKHYQAVVCLGAVIRGETDHYNYVCQQVSFGCQ 94
Query: 351 QISIKNNIPIINAILTTETIEQANSR 376
Q++++ +PII +LTT T EQA +R
Sbjct: 95 QVALEYEVPIIFGVLTTTTKEQAFAR 120
>TIGR_CMR|DET_1187 [details] [associations]
symbol:DET_1187 "6,7-dimethyl-8-ribityllumazine synthase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 HSSP:Q9UUB1
RefSeq:YP_181900.1 ProteinModelPortal:Q3Z799 SMR:Q3Z799
STRING:Q3Z799 GeneID:3229536 KEGG:det:DET1187 PATRIC:21609409
BioCyc:DETH243164:GJNF-1188-MONOMER Uniprot:Q3Z799
Length = 155
Score = 163 (62.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 29/80 (36%), Positives = 52/80 (65%)
Query: 302 VPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPII 361
VPGA EIPL + + + +++ +I +G +IRG T HFE +++E I ++ + ++P+I
Sbjct: 54 VPGAFEIPLVAQKLAKSGRYDAVICLGAVIRGSTPHFEYVSSEVSKGIARVGLDASLPVI 113
Query: 362 NAILTTETIEQANSRILTKV 381
++T ++IEQA R TK+
Sbjct: 114 FGVITADSIEQAIERAGTKM 133
>TAIR|locus:2051739 [details] [associations]
symbol:COS1 "AT2G44050" species:3702 "Arabidopsis
thaliana" [GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase
activity" evidence=IGI;ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=IEA;IGI;ISS] [GO:0009349 "riboflavin synthase
complex" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=IGI] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006007 "glucose catabolic process" evidence=RCA]
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016740 EMBL:AC004005
GO:GO:0009231 GO:GO:0009867 eggNOG:COG0054 KO:K00794 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI EMBL:AF148649 EMBL:AY050913
EMBL:AY091343 IPI:IPI00529546 PIR:T00685 RefSeq:NP_181933.1
UniGene:At.11483 ProteinModelPortal:O80575 SMR:O80575 IntAct:O80575
STRING:O80575 PaxDb:O80575 PRIDE:O80575 EnsemblPlants:AT2G44050.1
GeneID:819010 KEGG:ath:AT2G44050 GeneFarm:2212 TAIR:At2g44050
HOGENOM:HOG000229249 InParanoid:O80575 PhylomeDB:O80575
ProtClustDB:PLN02404 BioCyc:MetaCyc:AT2G44050-MONOMER
Genevestigator:O80575 GermOnline:AT2G44050 InterPro:IPR017420
PIRSF:PIRSF038166 Uniprot:O80575
Length = 227
Score = 163 (62.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 293 QEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQI 352
+E++I I VPG+ EI + +N+ + KF+ ++ IG +IRG+T H++ +AN S ++
Sbjct: 116 REEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAVIRGDTTHYDAVANSAASGVLSA 175
Query: 353 SIKNNIPIINAILTTETIEQANSR 376
SI + +P I +LT E ++QA +R
Sbjct: 176 SINSGVPCIFGVLTCEDMDQALNR 199
>SGD|S000005503 [details] [associations]
symbol:RIB4 "Lumazine synthase (DMRL synthase)" species:4932
"Saccharomyces cerevisiae" [GO:0009231 "riboflavin biosynthetic
process" evidence=IEA;IMP] [GO:0009349 "riboflavin synthase
complex" evidence=IEA] [GO:0000906 "6,7-dimethyl-8-ribityllumazine
synthase activity" evidence=IGI;ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 SGD:S000005503 GO:GO:0005634 EMBL:BK006948
GO:GO:0005758 GO:GO:0016740 GO:GO:0009231 eggNOG:COG0054
HOGENOM:HOG000229253 KO:K00794 OrthoDB:EOG49S9GR GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 EMBL:Z21620 EMBL:Z74885 EMBL:AY558430 PIR:S61871
RefSeq:NP_014498.1 PDB:1EJB PDBsum:1EJB ProteinModelPortal:P50861
SMR:P50861 DIP:DIP-1931N IntAct:P50861 MINT:MINT-397811
STRING:P50861 PaxDb:P50861 PeptideAtlas:P50861 EnsemblFungi:YOL143C
GeneID:854022 KEGG:sce:YOL143C CYGD:YOL143c OMA:GRFNSFI
BioCyc:MetaCyc:YOL143C-MONOMER EvolutionaryTrace:P50861
NextBio:975556 Genevestigator:P50861 GermOnline:YOL143C
Uniprot:P50861
Length = 169
Score = 154 (59.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 291 GAQEKNILHISVPGALEIPLALKNIIQI-----KKFNVLIAIGVIIRGETYHFELIANET 345
G +E NI+ +VPG+ E+P K + K +V+I IGV+I+G T HFE I++ T
Sbjct: 47 GVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIGVLIKGSTMHFEYISDST 106
Query: 346 ISNIMQISIKNNIPIINAILTTETIEQANSR 376
+M + K ++P+I +LT T EQA +R
Sbjct: 107 THALMNLQEKVDMPVIFGLLTCMTEEQALAR 137
>TIGR_CMR|NSE_0401 [details] [associations]
symbol:NSE_0401 "6,7-dimethyl-8-ribityllumazine synthase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016874 GO:GO:0016740 GO:GO:0009231 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0054 KO:K00794 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 HOGENOM:HOG000229249 RefSeq:YP_506288.1
ProteinModelPortal:Q2GE08 STRING:Q2GE08 GeneID:3931560
KEGG:nse:NSE_0401 PATRIC:22680863 OMA:LTMIELK
ProtClustDB:CLSK2528070 BioCyc:NSEN222891:GHFU-424-MONOMER
Uniprot:Q2GE08
Length = 149
Score = 151 (58.2 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 300 ISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIP 359
+ VPGA E+P AL NI+ K F + +G I++ T HF+ +++ IM ++IKNN+
Sbjct: 38 VYVPGAFELPTAL-NILHSKDFAGYVILGCIVKSGTPHFDYVSSAACRGIMDVAIKNNLA 96
Query: 360 IINAILTTETIEQANSR 376
I ++T +EQAN R
Sbjct: 97 IGFGVITANNMEQANER 113
>TIGR_CMR|CJE_0431 [details] [associations]
symbol:CJE_0431 "transcription antitermination factor
NusB" species:195099 "Campylobacter jejuni RM1221" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0006353 eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625
ProtClustDB:PRK00202 Gene3D:1.10.940.10 PANTHER:PTHR11078
SUPFAM:SSF48013 TIGRFAMs:TIGR01951 RefSeq:YP_178450.1
ProteinModelPortal:Q5HW85 STRING:Q5HW85 PRIDE:Q5HW85 GeneID:3231193
KEGG:cjr:CJE0431 PATRIC:20042562 OMA:QMPGVDK
BioCyc:CJEJ195099:GJC0-436-MONOMER Uniprot:Q5HW85
Length = 132
Score = 147 (56.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 390 RHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKV--DKKYFYLIL-RGVINDINFL 446
RH+ R+ + +Y + N+ + ++ EI + K+ ++K F L L G+++++N +
Sbjct: 4 RHQVRQSVISLLYAFELNSQN----NVFVDEILDEKKIRNEQKNFTLNLYNGILDNLNNI 59
Query: 447 RYDL-SLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYK 505
L S + D I L +E +L +G YEL P ++INEAIEL K N + K
Sbjct: 60 DETLNSFLNDNQITALGHVERAILRLGAYELL-FTDTPSAIVINEAIELAKELANDNSPK 118
Query: 506 YVNKILD 512
++N +LD
Sbjct: 119 FINGVLD 125
>UNIPROTKB|P66034 [details] [associations]
symbol:ribH "6,7-dimethyl-8-ribityllumazine synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0016740
EMBL:BX842576 GO:GO:0009231 eggNOG:COG0054 HOGENOM:HOG000229253
KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960 PANTHER:PTHR21058
SUPFAM:SSF52121 TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 OMA:IVSMESA
PIR:E70902 RefSeq:NP_215932.1 RefSeq:NP_335910.1
RefSeq:YP_006514796.1 PDB:1W19 PDB:1W29 PDB:2C92 PDB:2C94 PDB:2C97
PDB:2C9B PDB:2C9D PDB:2VI5 PDBsum:1W19 PDBsum:1W29 PDBsum:2C92
PDBsum:2C94 PDBsum:2C97 PDBsum:2C9B PDBsum:2C9D PDBsum:2VI5
ProteinModelPortal:P66034 SMR:P66034
EnsemblBacteria:EBMYCT00000003301 EnsemblBacteria:EBMYCT00000072146
GeneID:13320005 GeneID:886681 GeneID:924512 KEGG:mtc:MT1459
KEGG:mtu:Rv1416 KEGG:mtv:RVBD_1416 PATRIC:18124978
TubercuList:Rv1416 BindingDB:P66034 ChEMBL:CHEMBL1075177
EvolutionaryTrace:P66034 Uniprot:P66034
Length = 160
Score = 145 (56.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 300 ISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIP 359
+ V GA+EIP+ + + + + ++A+GV+IRG+T HF+ + + + ++S+ ++ P
Sbjct: 54 VRVLGAIEIPVVAQELA--RNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTP 111
Query: 360 IINAILTTETIEQANSR 376
I N +LTT T EQA R
Sbjct: 112 IANGVLTTNTEEQALDR 128
>POMBASE|SPBC409.13 [details] [associations]
symbol:SPBC409.13 "6,7-dimethyl-8-ribityllumazine
synthase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISO] [GO:0009349 "riboflavin synthase complex"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
PomBase:SPBC409.13 GO:GO:0005634 GO:GO:0005737 GO:GO:0016740
EMBL:CU329671 GenomeReviews:CU329671_GR DrugBank:DB00140
GO:GO:0009231 PIR:T40440 RefSeq:NP_595463.1 PDB:1KYV PDB:1KYX
PDB:1KYY PDB:1KZ1 PDB:1KZ4 PDB:1KZ6 PDB:1KZ9 PDB:2A57 PDB:2A58
PDB:2A59 PDBsum:1KYV PDBsum:1KYX PDBsum:1KYY PDBsum:1KZ1
PDBsum:1KZ4 PDBsum:1KZ6 PDBsum:1KZ9 PDBsum:2A57 PDBsum:2A58
PDBsum:2A59 ProteinModelPortal:Q9UUB1 SMR:Q9UUB1 STRING:Q9UUB1
PRIDE:Q9UUB1 EnsemblFungi:SPBC409.13.1 GeneID:2541125
KEGG:spo:SPBC409.13 eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794
OMA:TLAMIET OrthoDB:EOG49S9GR EvolutionaryTrace:Q9UUB1
NextBio:20802238 GO:GO:0009349 GO:GO:0000906 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 Uniprot:Q9UUB1
Length = 159
Score = 143 (55.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 295 KNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISI 354
+NI SVPG+ E+P ++ I ++ +I IGV+I+G T HFE I+ + +M++ +
Sbjct: 52 ENIDIESVPGSWELPQGIRASIARNTYDAVIGIGVLIKGSTMHFEYISEAVVHGLMRVGL 111
Query: 355 KNNIPIINAILTTETIEQA 373
+ +P+I +LT EQA
Sbjct: 112 DSGVPVILGLLTVLNEEQA 130
>TIGR_CMR|SPO_1762 [details] [associations]
symbol:SPO_1762 "6,7-dimethyl-8-ribityllumazine synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016740 GO:GO:0009231
KO:K00794 GO:GO:0009349 GO:GO:0000906 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114
ProtClustDB:PRK00061 HOGENOM:HOG000229250 OMA:GLCIGNG
RefSeq:YP_167000.1 ProteinModelPortal:Q5LSK5 GeneID:3192913
KEGG:sil:SPO1762 PATRIC:23376847 Uniprot:Q5LSK5
Length = 183
Score = 137 (53.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 300 ISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIP 359
+ VPGALE+P A+ + F+ +A+G +IRGET H++ + N++ S +Q+ +
Sbjct: 54 VEVPGALEVPTAIAMADRQSNFDGYVALGCVIRGETTHYDTVCNDS-SRAIQLMGLQGLC 112
Query: 360 IINAILTTETIEQANSR 376
I N ILT ET QA R
Sbjct: 113 IGNGILTVETRPQAEVR 129
>TIGR_CMR|DET_1278 [details] [associations]
symbol:DET_1278 "N utilization substance protein B"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0006353 eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 HSSP:Q9X286 RefSeq:YP_181990.1
ProteinModelPortal:Q3Z709 STRING:Q3Z709 GeneID:3229397
KEGG:det:DET1278 PATRIC:21609585 OMA:MKTYRRQ ProtClustDB:CLSK836998
BioCyc:DETH243164:GJNF-1279-MONOMER Uniprot:Q3Z709
Length = 143
Score = 134 (52.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 388 TPRHRAREFALQGIY-QWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFL 446
T R +ARE LQ +Y Q L + ++++ + E + + ++ + + ++ + L
Sbjct: 3 TSRRKAREIVLQALYEQDLAGHNAEDVLKRLLTETPQTEE-NAEFIFRLTNAIVKHKDLL 61
Query: 447 RYDLSLIIDR-SINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYK 505
++ + +LS I+ VL + +E+ +P KV INEA+EL KSFG +
Sbjct: 62 DENIRQFASAWPVEQLSYIDRNVLRLAIFEIIHENDVPIKVAINEAVELAKSFGGNSSAR 121
Query: 506 YVNKILDKVA 515
++N +L V+
Sbjct: 122 FINGVLSSVS 131
>TIGR_CMR|GSU_1692 [details] [associations]
symbol:GSU_1692 "N utilization substance protein B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0006353 eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 OMA:QMPGVDK HSSP:Q9X286 RefSeq:NP_952743.1
ProteinModelPortal:Q74CI1 GeneID:2685421 KEGG:gsu:GSU1692
PATRIC:22026233 ProtClustDB:CLSK828489
BioCyc:GSUL243231:GH27-1722-MONOMER Uniprot:Q74CI1
Length = 138
Score = 122 (48.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 390 RHRAREFALQGIYQWLFNNMDVN-LIETYIKEISNFYKVDKKYFYLILRGVINDINFLRY 448
R RE ALQ +Y + + L+E + E + + ++RGV+ +
Sbjct: 4 RRLGRELALQMLYSRDYAAGEAAPLLELVLDESEPGAAAGRSFADDLVRGVLEHRQEIDT 63
Query: 449 DLSLIIDR-SINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYKYV 507
++ SI ++ ++ +L + YEL IP V INEAIE+ K FG D ++
Sbjct: 64 AITGASKNWSIGRMARVDLSILRMAMYELLFRSDIPKNVTINEAIEVAKKFGTEDSPAFI 123
Query: 508 NKILDKVA 515
N ILD++A
Sbjct: 124 NGILDEIA 131
>TIGR_CMR|BA_4406 [details] [associations]
symbol:BA_4406 "N utilization substance protein B"
species:198094 "Bacillus anthracis str. Ames" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 GO:GO:0006353
RefSeq:NP_846634.1 RefSeq:YP_021049.1 RefSeq:YP_030336.1
ProteinModelPortal:Q81M49 DNASU:1087738
EnsemblBacteria:EBBACT00000010462 EnsemblBacteria:EBBACT00000015293
EnsemblBacteria:EBBACT00000022074 GeneID:1087738 GeneID:2816677
GeneID:2851749 KEGG:ban:BA_4406 KEGG:bar:GBAA_4406 KEGG:bat:BAS4086
eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625 OMA:TEYVEIA
ProtClustDB:PRK00202 BioCyc:BANT260799:GJAJ-4143-MONOMER
BioCyc:BANT261594:GJ7F-4286-MONOMER Gene3D:1.10.940.10
PANTHER:PTHR11078 SUPFAM:SSF48013 TIGRFAMs:TIGR01951 Uniprot:Q81M49
Length = 130
Score = 121 (47.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/129 (26%), Positives = 69/129 (53%)
Query: 390 RHRAREFALQGIYQW-LFNNMDVNL-IETYIKE--ISNFYKVDKKYFYLILRGVINDINF 445
R ARE A+Q +YQ + ++ + +E + E +N + ++ + VI++
Sbjct: 3 RRTARERAMQALYQMDITGELEPKVAVENTLDEGEETNEFLESLVVGFVENKEVIDEA-- 60
Query: 446 LRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDGYK 505
+R +L + +S ++ +L + YE+K +IP+ V INEAIE+ K+FG+ + +
Sbjct: 61 IRQNLK---KWKLERISIVDRSILRVAVYEMKYMEEIPHNVTINEAIEIAKTFGDEESRR 117
Query: 506 YVNKILDKV 514
++N +L +
Sbjct: 118 FINGVLSNI 126
>TIGR_CMR|APH_0539 [details] [associations]
symbol:APH_0539 "6,7-dimethyl-8-ribityllumazine synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016874 GO:GO:0016740 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 HOGENOM:HOG000229250
OMA:LTMIELK RefSeq:YP_505132.1 ProteinModelPortal:Q2GKG9
STRING:Q2GKG9 GeneID:3931270 KEGG:aph:APH_0539 PATRIC:20949730
BioCyc:APHA212042:GHPM-563-MONOMER Uniprot:Q2GKG9
Length = 152
Score = 116 (45.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 26/89 (29%), Positives = 50/89 (56%)
Query: 290 NGAQEKNILHISVPGALEIPLALKNIIQIKK--FNVLIAIGVIIRGETYHFELIANETIS 347
N A E + I VPGALE+P A+ + + ++ +A+G +++G T H ++N S
Sbjct: 38 NAAAECEV--IEVPGALEVPPAISFAVMSDRESYDGFVALGCVLKGYTDHNIHVSNSAFS 95
Query: 348 NIMQISIKNNIPIINAILTTETIEQANSR 376
+ I++++ +P+ I+T +T+ A R
Sbjct: 96 ALSDIAVQHAVPMGTGIITADTMSLAMER 124
>ASPGD|ASPL0000028987 [details] [associations]
symbol:riboG species:162425 "Emericella nidulans"
[GO:0009231 "riboflavin biosynthetic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IDA] [GO:0009349 "riboflavin
synthase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IEA]
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=IEA] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 EMBL:BN001305 GO:GO:0009231
HOGENOM:HOG000229253 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 GO:GO:0004746
EnsemblFungi:CADANIAT00003256 OMA:ETMHFEY Uniprot:C8VFD4
Length = 207
Score = 128 (50.1 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 291 GAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIM 350
G ++L S + P + K ++ +IAIGV+I+GET HFE IA+ +M
Sbjct: 88 GISATDLLSSSTADVSKTPSTASSAAS-KPYDAIIAIGVLIKGETMHFEYIADAVTHGLM 146
Query: 351 QISIKNNIPIINAILTTETIEQANSR 376
++ + +P+I +LT T EQ R
Sbjct: 147 RVQLDTGVPVIFGVLTLLTEEQGLER 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 527 515 0.00088 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 603 (64 KB)
Total size of DFA: 263 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.08u 0.07s 42.15t Elapsed: 00:00:40
Total cpu time: 42.09u 0.07s 42.16t Elapsed: 00:00:40
Start: Thu Aug 15 14:16:36 2013 End: Thu Aug 15 14:17:16 2013