Query psy2386
Match_columns 311
No_of_seqs 273 out of 2417
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 23:39:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 4E-62 1.4E-66 461.5 27.6 301 1-308 12-313 (350)
2 1vhn_A Putative flavin oxidore 100.0 3.8E-56 1.3E-60 415.7 25.0 287 1-308 13-305 (318)
3 4ef8_A Dihydroorotate dehydrog 100.0 4.1E-33 1.4E-37 262.4 15.1 175 44-230 125-323 (354)
4 1jub_A Dihydroorotate dehydrog 100.0 2.8E-32 9.6E-37 253.3 19.5 213 5-230 25-288 (311)
5 1z41_A YQJM, probable NADH-dep 100.0 2E-31 6.9E-36 250.5 20.2 222 4-232 38-325 (338)
6 2r14_A Morphinone reductase; H 100.0 2.1E-31 7.3E-36 253.4 19.1 214 4-229 42-343 (377)
7 3oix_A Putative dihydroorotate 100.0 9.5E-32 3.3E-36 252.4 16.0 173 43-230 126-321 (345)
8 2e6f_A Dihydroorotate dehydrog 100.0 3.5E-31 1.2E-35 246.2 19.7 213 5-230 27-290 (314)
9 1vyr_A Pentaerythritol tetrani 100.0 7.3E-31 2.5E-35 248.8 20.8 213 4-229 38-338 (364)
10 2gou_A Oxidoreductase, FMN-bin 100.0 9.1E-31 3.1E-35 248.2 19.1 214 3-229 37-337 (365)
11 1icp_A OPR1, 12-oxophytodienoa 100.0 4.4E-31 1.5E-35 251.3 15.3 209 8-229 54-345 (376)
12 3zwt_A Dihydroorotate dehydrog 100.0 7E-31 2.4E-35 248.7 16.2 172 45-230 146-344 (367)
13 2hsa_B 12-oxophytodienoate red 100.0 1.7E-30 6E-35 248.9 18.0 216 8-229 56-363 (402)
14 1f76_A Dihydroorotate dehydrog 100.0 6.6E-30 2.2E-34 239.9 16.8 208 8-230 70-335 (336)
15 3gr7_A NADPH dehydrogenase; fl 100.0 2.2E-28 7.5E-33 229.8 19.3 223 4-232 38-325 (340)
16 3i65_A Dihydroorotate dehydrog 100.0 6.3E-29 2.1E-33 237.1 14.9 172 45-230 181-391 (415)
17 1tv5_A Dhodehase, dihydroorota 100.0 2.4E-28 8.3E-33 235.8 16.9 172 45-230 179-419 (443)
18 1ps9_A 2,4-dienoyl-COA reducta 100.0 1E-27 3.6E-32 243.8 21.9 213 15-231 49-327 (671)
19 1o94_A Tmadh, trimethylamine d 100.0 1.7E-27 5.7E-32 244.5 20.1 215 8-230 45-337 (729)
20 3k30_A Histamine dehydrogenase 99.9 2.4E-27 8.1E-32 242.0 18.6 218 8-230 49-340 (690)
21 3kru_A NADH:flavin oxidoreduct 99.9 4.1E-27 1.4E-31 221.1 16.9 164 57-228 142-321 (343)
22 3hgj_A Chromate reductase; TIM 99.9 5.6E-27 1.9E-31 221.1 17.5 170 57-232 151-336 (349)
23 3l5a_A NADH/flavin oxidoreduct 99.9 3E-27 1E-31 227.4 15.9 171 58-231 170-363 (419)
24 1gte_A Dihydropyrimidine dehyd 99.9 4.6E-27 1.6E-31 249.1 18.7 170 45-229 634-832 (1025)
25 1ep3_A Dihydroorotate dehydrog 99.9 7.3E-27 2.5E-31 216.3 17.1 172 45-230 98-286 (311)
26 3gka_A N-ethylmaleimide reduct 99.9 8.9E-27 3E-31 220.0 15.7 156 57-230 160-332 (361)
27 4ab4_A Xenobiotic reductase B; 99.9 1.1E-26 3.8E-31 219.4 15.5 155 58-230 153-324 (362)
28 3l5l_A Xenobiotic reductase A; 99.9 6.5E-26 2.2E-30 214.8 17.8 168 58-231 158-342 (363)
29 3aty_A Tcoye, prostaglandin F2 99.9 1E-24 3.5E-29 207.5 16.8 161 56-230 172-352 (379)
30 3tjl_A NADPH dehydrogenase; OL 99.9 1.3E-24 4.4E-29 207.4 10.5 164 58-230 167-362 (407)
31 2nli_A Lactate oxidase; flavoe 99.9 3.1E-23 1.1E-27 196.6 18.0 229 5-273 99-358 (368)
32 3tjx_A Dihydroorotate dehydrog 99.9 5.9E-23 2E-27 194.0 16.0 175 43-229 124-322 (354)
33 2nzl_A Hydroxyacid oxidase 1; 99.9 1E-22 3.5E-27 194.4 15.0 232 1-272 102-380 (392)
34 1p0k_A Isopentenyl-diphosphate 99.9 1.2E-21 3.9E-26 184.7 18.3 232 5-272 75-324 (349)
35 1gox_A (S)-2-hydroxy-acid oxid 99.9 2.6E-21 8.9E-26 183.7 18.5 234 1-275 79-356 (370)
36 1kbi_A Cytochrome B2, L-LCR; f 99.9 5.5E-21 1.9E-25 188.1 15.4 229 4-274 208-478 (511)
37 4a3u_A NCR, NADH\:flavin oxido 99.8 3.5E-19 1.2E-23 168.3 16.6 163 58-230 152-331 (358)
38 1mzh_A Deoxyribose-phosphate a 99.8 7.9E-19 2.7E-23 155.7 9.9 187 2-229 16-215 (225)
39 1p4c_A L(+)-mandelate dehydrog 99.8 5E-18 1.7E-22 161.5 15.8 227 4-274 90-353 (380)
40 1jvn_A Glutamine, bifunctional 99.8 1.6E-18 5.4E-23 172.5 12.3 212 11-235 285-547 (555)
41 1vcf_A Isopentenyl-diphosphate 99.8 4.8E-18 1.6E-22 158.9 14.4 227 6-269 78-325 (332)
42 2z6i_A Trans-2-enoyl-ACP reduc 99.8 1.2E-17 4.1E-22 156.2 16.7 186 2-231 22-210 (332)
43 4gbu_A NADPH dehydrogenase 1; 99.7 1.1E-17 3.8E-22 160.2 14.7 168 58-230 172-364 (400)
44 3vkj_A Isopentenyl-diphosphate 99.7 1.8E-16 6.1E-21 149.9 17.5 236 2-272 69-339 (368)
45 2agk_A 1-(5-phosphoribosyl)-5- 99.7 1.9E-17 6.6E-22 149.7 8.2 157 46-231 75-256 (260)
46 2y88_A Phosphoribosyl isomeras 99.7 3.5E-16 1.2E-20 139.5 15.2 156 45-231 74-242 (244)
47 2yzr_A Pyridoxal biosynthesis 99.7 1.9E-16 6.6E-21 145.4 12.7 154 61-222 27-281 (330)
48 3bo9_A Putative nitroalkan dio 99.6 1E-14 3.6E-19 136.0 17.7 186 2-231 36-224 (326)
49 3o07_A Pyridoxine biosynthesis 99.6 3.3E-15 1.1E-19 133.6 12.9 154 47-222 13-237 (291)
50 3bw2_A 2-nitropropane dioxygen 99.6 1.6E-14 5.6E-19 136.8 18.5 184 2-224 21-247 (369)
51 3sr7_A Isopentenyl-diphosphate 99.6 9.5E-15 3.2E-19 137.8 16.3 234 6-270 106-349 (365)
52 3sgz_A Hydroxyacid oxidase 2; 99.6 6.5E-15 2.2E-19 137.9 14.6 201 45-278 121-351 (352)
53 1vzw_A Phosphoribosyl isomeras 99.6 1.7E-14 5.7E-19 128.8 16.6 157 45-231 75-239 (244)
54 2gjl_A Hypothetical protein PA 99.6 2.1E-14 7.3E-19 133.9 17.1 179 2-222 25-209 (328)
55 3tdn_A FLR symmetric alpha-bet 99.6 3.4E-16 1.2E-20 140.2 4.2 156 45-230 79-245 (247)
56 1qo2_A Molecule: N-((5-phospho 99.6 1.8E-14 6.1E-19 128.5 13.9 185 13-230 40-239 (241)
57 1ypf_A GMP reductase; GUAC, pu 99.6 4.1E-14 1.4E-18 132.5 15.8 178 2-219 56-244 (336)
58 1ka9_F Imidazole glycerol phos 99.6 9.2E-14 3.1E-18 124.4 16.5 161 44-234 74-245 (252)
59 1thf_D HISF protein; thermophI 99.6 9.9E-14 3.4E-18 124.2 16.5 192 12-234 39-244 (253)
60 2w6r_A Imidazole glycerol phos 99.5 1.1E-13 3.9E-18 124.8 14.7 192 12-233 39-248 (266)
61 1h5y_A HISF; histidine biosynt 99.5 3E-13 1E-17 120.2 15.2 193 10-233 40-246 (253)
62 1eep_A Inosine 5'-monophosphat 99.4 1.8E-12 6.3E-17 124.1 16.4 142 47-224 143-295 (404)
63 2pgw_A Muconate cycloisomerase 99.4 7.3E-12 2.5E-16 119.1 16.2 150 45-231 136-288 (384)
64 1y0e_A Putative N-acetylmannos 99.4 8E-12 2.7E-16 109.7 13.9 159 47-224 8-213 (223)
65 2nv1_A Pyridoxal biosynthesis 99.3 4.1E-12 1.4E-16 117.3 11.3 170 46-230 22-257 (305)
66 4fxs_A Inosine-5'-monophosphat 99.3 2.5E-11 8.4E-16 119.1 15.3 135 53-221 226-370 (496)
67 3khj_A Inosine-5-monophosphate 99.3 5.4E-11 1.8E-15 112.2 16.7 181 2-224 55-246 (361)
68 3tdn_A FLR symmetric alpha-bet 99.3 6.2E-12 2.1E-16 112.4 9.7 103 117-231 22-125 (247)
69 4avf_A Inosine-5'-monophosphat 99.3 3E-11 1E-15 118.4 14.7 139 48-221 220-368 (490)
70 1yxy_A Putative N-acetylmannos 99.3 2.6E-11 9E-16 107.3 12.8 156 45-222 17-222 (234)
71 1jcn_A Inosine monophosphate d 99.3 3.5E-11 1.2E-15 118.6 14.9 142 54-224 251-397 (514)
72 3r2g_A Inosine 5'-monophosphat 99.2 1.7E-10 5.9E-15 108.3 16.8 177 2-222 52-236 (361)
73 4gj1_A 1-(5-phosphoribosyl)-5- 99.2 2.5E-10 8.6E-15 102.0 16.6 156 46-231 74-241 (243)
74 3q58_A N-acetylmannosamine-6-p 99.2 6.3E-11 2.2E-15 104.9 12.5 123 65-225 95-220 (229)
75 3igs_A N-acetylmannosamine-6-p 99.2 1.2E-10 4E-15 103.4 12.9 122 65-224 95-219 (232)
76 1mdl_A Mandelate racemase; iso 99.2 1.3E-10 4.4E-15 109.4 13.7 151 45-231 133-287 (359)
77 1xg4_A Probable methylisocitra 99.2 1.3E-10 4.3E-15 106.5 13.0 196 5-219 26-240 (295)
78 2qjg_A Putative aldolase MJ040 99.2 2E-10 7E-15 103.9 14.1 155 45-229 79-252 (273)
79 2ovl_A Putative racemase; stru 99.2 1.7E-10 6E-15 109.0 12.9 140 56-231 146-289 (371)
80 2rdx_A Mandelate racemase/muco 99.2 3E-10 1E-14 107.7 14.2 146 45-230 134-283 (379)
81 3eez_A Putative mandelate race 99.1 3.3E-10 1.1E-14 107.5 13.4 148 44-231 133-284 (378)
82 2p8b_A Mandelate racemase/muco 99.1 4.7E-10 1.6E-14 105.9 14.4 149 45-230 130-283 (369)
83 2nql_A AGR_PAT_674P, isomerase 99.1 4.2E-10 1.4E-14 107.1 13.6 146 46-229 153-303 (388)
84 1qo2_A Molecule: N-((5-phospho 99.1 9.5E-11 3.2E-15 104.2 8.3 102 117-230 13-117 (241)
85 2qdd_A Mandelate racemase/muco 99.1 4.8E-10 1.6E-14 106.3 13.6 147 44-230 133-283 (378)
86 2qr6_A IMP dehydrogenase/GMP r 99.1 7.4E-10 2.5E-14 105.6 14.9 193 2-222 77-314 (393)
87 2hzg_A Mandelate racemase/muco 99.1 1.6E-09 5.4E-14 103.5 15.7 151 45-229 133-292 (401)
88 1geq_A Tryptophan synthase alp 99.1 2.4E-09 8.1E-14 95.4 15.3 169 46-220 5-226 (248)
89 1vrd_A Inosine-5'-monophosphat 99.1 1.9E-09 6.4E-14 105.7 15.5 132 58-223 236-378 (494)
90 1rvk_A Isomerase/lactonizing e 99.1 4E-09 1.4E-13 100.0 17.3 146 55-230 148-298 (382)
91 3usb_A Inosine-5'-monophosphat 99.1 1.1E-09 3.6E-14 107.9 13.2 138 48-221 247-395 (511)
92 3ffs_A Inosine-5-monophosphate 99.0 4.4E-09 1.5E-13 100.1 16.5 135 61-222 146-283 (400)
93 1nu5_A Chloromuconate cycloiso 99.0 4.9E-09 1.7E-13 99.0 16.2 147 47-229 133-284 (370)
94 4fo4_A Inosine 5'-monophosphat 99.0 2.5E-09 8.7E-14 100.8 13.5 129 60-222 109-248 (366)
95 1wa3_A 2-keto-3-deoxy-6-phosph 99.0 3.8E-09 1.3E-13 91.4 13.6 147 45-219 9-183 (205)
96 2zbt_A Pyridoxal biosynthesis 99.0 9.8E-09 3.4E-13 94.0 16.7 162 45-220 21-244 (297)
97 1tkk_A Similar to chloromucona 99.0 6.5E-09 2.2E-13 98.0 15.5 149 45-229 129-283 (366)
98 2ps2_A Putative mandelate race 99.0 6.6E-09 2.3E-13 98.1 14.9 146 44-229 134-284 (371)
99 3ozy_A Putative mandelate race 99.0 6.3E-09 2.2E-13 99.0 14.6 148 46-230 139-293 (389)
100 2qgy_A Enolase from the enviro 99.0 6.8E-09 2.3E-13 98.8 14.2 144 51-230 143-291 (391)
101 2gl5_A Putative dehydratase pr 98.9 9.6E-09 3.3E-13 98.3 13.5 153 45-221 129-306 (410)
102 1rd5_A Tryptophan synthase alp 98.9 1.7E-08 5.9E-13 90.7 13.8 162 45-219 17-235 (262)
103 4adt_A Pyridoxine biosynthetic 98.9 5.8E-08 2E-12 88.9 17.0 141 63-222 33-246 (297)
104 1wv2_A Thiazole moeity, thiazo 98.9 1.7E-07 5.8E-12 83.3 18.2 145 45-219 73-221 (265)
105 1thf_D HISF protein; thermophI 98.9 4.7E-09 1.6E-13 93.6 8.1 89 133-231 31-120 (253)
106 2v82_A 2-dehydro-3-deoxy-6-pho 98.8 4.7E-08 1.6E-12 84.9 13.8 150 44-220 5-182 (212)
107 2qde_A Mandelate racemase/muco 98.8 4E-08 1.4E-12 93.6 13.7 146 45-227 134-283 (397)
108 2ox4_A Putative mandelate race 98.8 2.9E-08 9.9E-13 94.7 12.6 142 56-221 146-297 (403)
109 2poz_A Putative dehydratase; o 98.8 2.1E-08 7.2E-13 95.4 11.5 148 54-222 135-288 (392)
110 3vnd_A TSA, tryptophan synthas 98.8 7.7E-08 2.6E-12 86.9 14.3 165 45-218 17-239 (267)
111 2oz8_A MLL7089 protein; struct 98.8 1.4E-07 4.7E-12 89.7 16.5 123 56-214 145-273 (389)
112 3cwo_X Beta/alpha-barrel prote 98.8 2.4E-07 8E-12 80.4 16.7 158 45-234 53-223 (237)
113 2og9_A Mandelate racemase/muco 98.8 4.5E-08 1.5E-12 93.2 13.0 137 56-228 162-302 (393)
114 3tsm_A IGPS, indole-3-glycerol 98.8 4.3E-07 1.5E-11 82.1 18.6 148 44-233 119-268 (272)
115 2c6q_A GMP reductase 2; TIM ba 98.8 3.2E-07 1.1E-11 86.0 18.4 139 47-220 108-258 (351)
116 1qop_A Tryptophan synthase alp 98.8 1.9E-07 6.5E-12 84.4 16.3 166 45-219 16-239 (268)
117 3rcy_A Mandelate racemase/muco 98.8 6.7E-08 2.3E-12 93.2 13.9 151 55-229 145-299 (433)
118 1ka9_F Imidazole glycerol phos 98.8 1.6E-08 5.6E-13 90.0 8.5 89 133-231 32-121 (252)
119 3qja_A IGPS, indole-3-glycerol 98.8 7.5E-07 2.6E-11 80.6 19.3 145 44-230 112-258 (272)
120 2pp0_A L-talarate/galactarate 98.8 7.8E-08 2.7E-12 91.7 13.3 136 56-227 175-314 (398)
121 2o56_A Putative mandelate race 98.7 8.8E-08 3E-12 91.5 13.1 141 56-220 152-302 (407)
122 2qq6_A Mandelate racemase/muco 98.7 9.1E-08 3.1E-12 91.5 13.1 135 56-216 149-293 (410)
123 3stp_A Galactonate dehydratase 98.7 9.8E-08 3.3E-12 91.5 13.1 156 44-229 166-326 (412)
124 2ekc_A AQ_1548, tryptophan syn 98.7 1.5E-07 5E-12 84.9 13.5 167 47-220 18-240 (262)
125 3nav_A Tryptophan synthase alp 98.7 9.2E-08 3.1E-12 86.5 11.6 167 45-218 19-241 (271)
126 3vzx_A Heptaprenylglyceryl pho 98.7 3.5E-07 1.2E-11 80.4 15.0 60 172-231 166-225 (228)
127 2gdq_A YITF; mandelate racemas 98.7 8.2E-08 2.8E-12 91.0 11.8 137 46-218 124-270 (382)
128 3vk5_A MOEO5; TIM barrel, tran 98.7 7.8E-07 2.7E-11 80.1 17.3 160 56-230 51-274 (286)
129 3f4w_A Putative hexulose 6 pho 98.7 3.6E-07 1.2E-11 79.1 14.6 144 45-224 53-197 (211)
130 2zad_A Muconate cycloisomerase 98.7 3.9E-07 1.4E-11 85.0 15.9 141 45-222 128-275 (345)
131 2y88_A Phosphoribosyl isomeras 98.7 4.7E-08 1.6E-12 86.5 8.8 86 134-230 33-119 (244)
132 1vzw_A Phosphoribosyl isomeras 98.7 5.1E-08 1.7E-12 86.5 8.7 87 133-230 33-120 (244)
133 3rr1_A GALD, putative D-galact 98.7 1.9E-07 6.5E-12 89.2 13.3 150 44-221 113-266 (405)
134 1ujp_A Tryptophan synthase alp 98.7 1.6E-07 5.6E-12 84.9 11.8 162 47-220 17-235 (271)
135 3sjn_A Mandelate racemase/muco 98.7 1.1E-07 3.6E-12 90.1 11.0 131 56-219 146-280 (374)
136 3bjs_A Mandelate racemase/muco 98.7 1.3E-07 4.5E-12 91.0 11.7 131 54-221 182-318 (428)
137 3i4k_A Muconate lactonizing en 98.6 6E-07 2E-11 85.1 15.7 149 45-229 137-290 (383)
138 4e5t_A Mandelate racemase / mu 98.6 2E-07 6.7E-12 89.1 12.4 150 55-229 150-304 (404)
139 1tzz_A Hypothetical protein L1 98.6 2.3E-07 7.8E-12 88.2 12.7 138 56-229 165-310 (392)
140 2yw3_A 4-hydroxy-2-oxoglutarat 98.6 2.4E-07 8.1E-12 80.6 11.4 146 45-219 12-184 (207)
141 1h5y_A HISF; histidine biosynt 98.6 8.2E-08 2.8E-12 84.8 8.5 88 133-230 34-122 (253)
142 4dwd_A Mandelate racemase/muco 98.6 7.6E-07 2.6E-11 84.7 15.7 154 44-227 124-284 (393)
143 3sbf_A Mandelate racemase / mu 98.6 2.4E-07 8.3E-12 88.4 12.3 165 44-229 121-297 (401)
144 1zfj_A Inosine monophosphate d 98.6 7.3E-07 2.5E-11 87.1 15.9 128 61-222 235-373 (491)
145 3ro6_B Putative chloromuconate 98.6 2.2E-07 7.4E-12 87.3 11.6 146 45-227 129-279 (356)
146 3r4e_A Mandelate racemase/muco 98.6 2.1E-07 7.3E-12 89.3 11.4 164 44-228 131-315 (418)
147 3jva_A Dipeptide epimerase; en 98.6 7.2E-07 2.5E-11 83.7 14.3 147 46-229 129-279 (354)
148 3oa3_A Aldolase; structural ge 98.6 1E-06 3.4E-11 79.8 14.2 139 55-218 123-269 (288)
149 4e4u_A Mandalate racemase/muco 98.5 5.2E-07 1.8E-11 86.4 12.5 150 55-229 143-297 (412)
150 1viz_A PCRB protein homolog; s 98.5 8.8E-07 3E-11 78.6 12.8 148 61-229 23-226 (240)
151 1xm3_A Thiazole biosynthesis p 98.5 1.7E-06 5.8E-11 77.9 14.9 146 45-222 65-215 (264)
152 1i4n_A Indole-3-glycerol phosp 98.5 3.8E-06 1.3E-10 75.0 16.8 146 44-231 100-247 (251)
153 2hxt_A L-fuconate dehydratase; 98.5 5.3E-07 1.8E-11 87.0 12.0 127 54-216 196-326 (441)
154 2w6r_A Imidazole glycerol phos 98.5 2.2E-07 7.7E-12 83.3 7.8 87 133-229 31-121 (266)
155 1sjd_A N-acylamino acid racema 98.5 1E-06 3.5E-11 82.9 12.6 129 46-214 130-263 (368)
156 1vc4_A Indole-3-glycerol phosp 98.5 1.8E-06 6.3E-11 77.3 13.5 142 45-229 106-251 (254)
157 3tji_A Mandelate racemase/muco 98.5 6.9E-07 2.4E-11 85.8 11.1 165 44-229 142-318 (422)
158 3my9_A Muconate cycloisomerase 98.5 2.8E-06 9.5E-11 80.3 15.1 147 45-227 135-285 (377)
159 3gd6_A Muconate cycloisomerase 98.5 2E-06 6.8E-11 81.8 14.1 147 45-230 127-284 (391)
160 3r12_A Deoxyribose-phosphate a 98.5 1.8E-06 6.3E-11 77.1 12.9 139 56-219 109-252 (260)
161 1rpx_A Protein (ribulose-phosp 98.5 3E-06 1E-10 74.4 14.1 159 48-228 13-221 (230)
162 3ovp_A Ribulose-phosphate 3-ep 98.4 5.5E-06 1.9E-10 73.0 15.5 151 47-222 6-205 (228)
163 3ddm_A Putative mandelate race 98.4 7.2E-07 2.5E-11 84.9 10.5 125 54-215 153-282 (392)
164 3q45_A Mandelate racemase/muco 98.4 2.9E-06 9.9E-11 80.0 14.0 145 47-228 131-279 (368)
165 1h1y_A D-ribulose-5-phosphate 98.4 5.5E-06 1.9E-10 72.8 14.9 144 45-223 64-210 (228)
166 3tj4_A Mandelate racemase; eno 98.4 2.3E-06 8E-11 80.7 13.2 134 46-215 138-279 (372)
167 1chr_A Chloromuconate cycloiso 98.4 3.8E-06 1.3E-10 79.2 14.5 142 45-222 131-277 (370)
168 3ndo_A Deoxyribose-phosphate a 98.4 1.8E-06 6.3E-11 76.0 11.1 142 56-218 78-225 (231)
169 3fv9_G Mandelate racemase/muco 98.4 4.6E-06 1.6E-10 79.1 14.8 151 43-228 132-287 (386)
170 3tha_A Tryptophan synthase alp 98.4 7.1E-07 2.4E-11 79.7 8.5 165 45-218 13-231 (252)
171 3i6e_A Muconate cycloisomerase 98.4 7.6E-06 2.6E-10 77.6 16.1 148 45-228 137-287 (385)
172 3toy_A Mandelate racemase/muco 98.4 4.8E-06 1.7E-10 78.9 14.6 139 44-218 155-298 (383)
173 4gj1_A 1-(5-phosphoribosyl)-5- 98.4 7.8E-07 2.7E-11 79.2 8.6 88 134-231 33-121 (243)
174 2p10_A MLL9387 protein; putati 98.4 1.2E-06 4.2E-11 78.7 9.7 168 37-221 87-266 (286)
175 3ugv_A Enolase; enzyme functio 98.4 3.1E-06 1.1E-10 80.4 13.0 143 44-222 156-308 (390)
176 3dg3_A Muconate cycloisomerase 98.4 5E-06 1.7E-10 78.3 14.0 136 44-216 127-268 (367)
177 1tqj_A Ribulose-phosphate 3-ep 98.4 3.9E-06 1.3E-10 74.0 12.3 156 48-228 7-215 (230)
178 1r0m_A N-acylamino acid racema 98.4 2.5E-06 8.5E-11 80.5 11.6 129 46-214 137-269 (375)
179 2f6u_A GGGPS, (S)-3-O-geranylg 98.4 4.8E-06 1.6E-10 73.6 12.6 139 62-222 24-226 (234)
180 3v3w_A Starvation sensing prot 98.4 3.3E-06 1.1E-10 81.1 12.5 162 44-229 137-322 (424)
181 3vcn_A Mannonate dehydratase; 98.3 2.6E-06 9E-11 81.8 11.8 162 44-229 138-323 (425)
182 2fli_A Ribulose-phosphate 3-ep 98.3 9.5E-06 3.3E-10 70.4 14.3 150 48-223 6-207 (220)
183 3w01_A Heptaprenylglyceryl pho 98.3 5.8E-06 2E-10 72.9 12.8 143 66-229 31-229 (235)
184 1yad_A Regulatory protein TENI 98.3 4.7E-06 1.6E-10 72.6 12.2 77 138-222 123-200 (221)
185 3ngj_A Deoxyribose-phosphate a 98.3 4.8E-06 1.6E-10 73.6 11.6 138 56-219 93-236 (239)
186 2zc8_A N-acylamino acid racema 98.3 4.1E-06 1.4E-10 78.8 11.8 136 46-221 130-269 (369)
187 1w8s_A FBP aldolase, fructose- 98.3 4.2E-05 1.4E-09 68.7 17.6 132 63-226 97-243 (263)
188 1pii_A N-(5'phosphoribosyl)ant 98.3 3.2E-05 1.1E-09 74.5 17.8 147 45-233 108-255 (452)
189 2qr6_A IMP dehydrogenase/GMP r 98.3 4.3E-06 1.5E-10 79.4 11.5 102 98-217 140-242 (393)
190 3ajx_A 3-hexulose-6-phosphate 98.3 3.9E-05 1.3E-09 65.9 16.5 141 45-224 53-196 (207)
191 3r0u_A Enzyme of enolase super 98.3 1.6E-05 5.6E-10 75.1 15.1 148 44-228 130-283 (379)
192 3inp_A D-ribulose-phosphate 3- 98.3 1.4E-05 4.8E-10 71.1 13.5 152 47-223 29-232 (246)
193 1ub3_A Aldolase protein; schif 98.2 2E-05 6.9E-10 68.9 14.2 138 56-219 69-212 (220)
194 3go2_A Putative L-alanine-DL-g 98.2 9E-06 3.1E-10 77.7 12.8 140 55-217 142-295 (409)
195 4e8g_A Enolase, mandelate race 98.2 1.1E-05 3.8E-10 76.6 13.2 145 45-228 153-302 (391)
196 1xi3_A Thiamine phosphate pyro 98.2 2.9E-05 1E-09 66.8 14.8 78 138-223 121-199 (215)
197 1me8_A Inosine-5'-monophosphat 98.2 2.1E-05 7E-10 77.2 15.2 131 62-219 245-386 (503)
198 1ea0_A Glutamate synthase [NAD 98.2 4.5E-06 1.5E-10 89.7 10.8 114 98-219 976-1098(1479)
199 3t6c_A RSPA, putative MAND fam 98.2 1.3E-05 4.4E-10 77.4 13.1 165 44-229 143-336 (440)
200 2tps_A Protein (thiamin phosph 98.2 1.6E-05 5.5E-10 69.2 12.5 78 138-222 129-208 (227)
201 3mwc_A Mandelate racemase/muco 98.2 1.2E-05 4.2E-10 76.5 12.6 144 45-228 149-299 (400)
202 3mqt_A Mandelate racemase/muco 98.2 1.5E-05 5.1E-10 75.8 12.9 151 44-228 131-296 (394)
203 3tcs_A Racemase, putative; PSI 98.2 4.1E-05 1.4E-09 72.6 15.2 145 56-229 146-295 (388)
204 3glc_A Aldolase LSRF; TIM barr 98.1 3.3E-05 1.1E-09 70.5 13.8 147 45-223 105-266 (295)
205 1ofd_A Ferredoxin-dependent gl 98.1 4E-06 1.4E-10 90.3 8.7 116 97-220 1010-1134(1520)
206 4e4f_A Mannonate dehydratase; 98.1 1.2E-05 4.1E-10 77.2 11.0 164 45-229 138-324 (426)
207 3mkc_A Racemase; metabolic pro 98.1 1.8E-05 6E-10 75.3 11.9 136 59-228 160-301 (394)
208 2uva_G Fatty acid synthase bet 98.1 1.9E-05 6.4E-10 88.5 13.1 148 44-222 636-803 (2060)
209 3dgb_A Muconate cycloisomerase 98.1 5.9E-05 2E-09 71.3 14.8 146 46-227 138-288 (382)
210 2htm_A Thiazole biosynthesis p 98.0 0.0002 6.9E-09 63.8 16.3 146 45-219 63-212 (268)
211 3p3b_A Mandelate racemase/muco 98.0 8.1E-06 2.8E-10 77.5 6.9 133 52-214 137-285 (392)
212 4hnl_A Mandelate racemase/muco 98.0 5.2E-05 1.8E-09 72.6 12.5 155 44-219 141-307 (421)
213 3fcp_A L-Ala-D/L-Glu epimerase 98.0 0.00019 6.5E-09 67.8 16.0 148 45-228 136-288 (381)
214 4e38_A Keto-hydroxyglutarate-a 98.0 9.2E-05 3.2E-09 65.2 12.5 144 46-218 34-206 (232)
215 4a35_A Mitochondrial enolase s 97.9 0.00013 4.3E-09 70.4 13.9 139 54-229 199-344 (441)
216 1n7k_A Deoxyribose-phosphate a 97.9 0.00013 4.3E-09 64.4 12.7 136 55-219 85-228 (234)
217 4a29_A Engineered retro-aldol 97.9 0.00049 1.7E-08 61.1 16.4 141 45-227 104-246 (258)
218 1vhc_A Putative KHG/KDPG aldol 97.9 8.4E-05 2.9E-09 65.2 11.2 168 45-257 16-213 (224)
219 4eiv_A Deoxyribose-phosphate a 97.9 0.00012 4.1E-09 66.1 12.0 128 55-207 97-253 (297)
220 3ik4_A Mandelate racemase/muco 97.9 0.00019 6.5E-09 67.4 13.8 137 45-217 132-273 (365)
221 3ctl_A D-allulose-6-phosphate 97.9 0.00017 5.9E-09 63.5 12.5 149 48-222 3-204 (231)
222 3ih1_A Methylisocitrate lyase; 97.8 0.00025 8.5E-09 64.9 13.7 151 45-219 89-248 (305)
223 3eoo_A Methylisocitrate lyase; 97.8 0.00019 6.4E-09 65.5 12.6 153 45-219 83-244 (298)
224 1wbh_A KHG/KDPG aldolase; lyas 97.8 0.00063 2.1E-08 59.1 14.5 149 45-223 15-193 (214)
225 1to3_A Putative aldolase YIHT; 97.8 0.00072 2.5E-08 61.9 15.3 133 62-220 112-260 (304)
226 2hjp_A Phosphonopyruvate hydro 97.7 0.00059 2E-08 62.0 14.4 153 44-218 74-239 (290)
227 2a4a_A Deoxyribose-phosphate a 97.7 0.00025 8.4E-09 64.1 11.5 127 56-207 104-246 (281)
228 1p1x_A Deoxyribose-phosphate a 97.7 0.00026 8.9E-09 63.3 11.4 128 56-207 83-219 (260)
229 4af0_A Inosine-5'-monophosphat 97.7 0.001 3.4E-08 65.0 16.3 130 54-218 277-417 (556)
230 1jvn_A Glutamine, bifunctional 97.7 8.7E-05 3E-09 73.6 9.0 92 133-231 281-397 (555)
231 3dip_A Enolase; structural gen 97.7 0.00025 8.4E-09 67.7 11.5 142 61-227 161-308 (410)
232 3lab_A Putative KDPG (2-keto-3 97.7 0.0003 1E-08 61.2 10.8 149 44-222 11-194 (217)
233 4dye_A Isomerase; enolase fami 97.7 0.00039 1.3E-08 66.1 12.5 133 57-228 169-305 (398)
234 1tqx_A D-ribulose-5-phosphate 97.7 0.00052 1.8E-08 60.2 12.4 141 45-222 64-209 (227)
235 3b8i_A PA4872 oxaloacetate dec 97.7 0.0013 4.5E-08 59.6 15.3 147 44-215 81-235 (287)
236 1zlp_A PSR132, petal death pro 97.6 0.00099 3.4E-08 61.2 14.4 151 45-218 101-261 (318)
237 3o63_A Probable thiamine-phosp 97.6 0.00019 6.6E-09 63.6 9.3 82 138-226 148-231 (243)
238 2agk_A 1-(5-phosphoribosyl)-5- 97.6 5.3E-05 1.8E-09 68.0 5.6 80 134-231 40-125 (260)
239 2ze3_A DFA0005; organic waste 97.6 0.0022 7.6E-08 57.8 15.9 145 46-218 77-236 (275)
240 2h6r_A Triosephosphate isomera 97.6 0.0017 5.7E-08 56.6 14.5 134 65-228 76-213 (219)
241 2pge_A MENC; OSBS, NYSGXRC, PS 97.6 0.0011 3.9E-08 62.2 14.4 140 45-220 151-297 (377)
242 1mxs_A KDPG aldolase; 2-keto-3 97.6 0.00032 1.1E-08 61.5 9.8 150 45-223 25-203 (225)
243 2cu0_A Inosine-5'-monophosphat 97.6 0.0005 1.7E-08 66.9 11.9 125 61-219 230-362 (486)
244 1wuf_A Hypothetical protein LI 97.5 0.00062 2.1E-08 64.4 11.3 136 46-221 150-289 (393)
245 1s2w_A Phosphoenolpyruvate pho 97.5 0.0033 1.1E-07 57.2 15.4 152 44-218 78-242 (295)
246 3lye_A Oxaloacetate acetyl hyd 97.5 0.0013 4.3E-08 60.2 12.7 152 45-218 88-251 (307)
247 3cu2_A Ribulose-5-phosphate 3- 97.5 0.00093 3.2E-08 59.0 11.2 147 48-220 16-223 (237)
248 1vcv_A Probable deoxyribose-ph 97.5 0.0022 7.5E-08 56.1 13.4 132 56-208 65-206 (226)
249 2uv8_G Fatty acid synthase sub 97.4 0.00072 2.5E-08 75.6 12.3 159 43-232 642-822 (2051)
250 2czd_A Orotidine 5'-phosphate 97.4 0.0059 2E-07 52.4 15.8 134 46-222 54-193 (208)
251 3ceu_A Thiamine phosphate pyro 97.4 0.00094 3.2E-08 57.6 10.4 77 138-221 101-179 (210)
252 3jr2_A Hexulose-6-phosphate sy 97.4 0.00071 2.4E-08 58.7 9.7 133 50-220 66-200 (218)
253 3fa4_A 2,3-dimethylmalate lyas 97.3 0.0028 9.5E-08 57.8 13.1 152 45-218 80-243 (302)
254 1q6o_A Humps, 3-keto-L-gulonat 97.3 0.0032 1.1E-07 54.4 12.6 136 48-222 61-199 (216)
255 4dxk_A Mandelate racemase / mu 97.3 0.00064 2.2E-08 64.6 8.4 135 62-219 158-296 (400)
256 1oy0_A Ketopantoate hydroxymet 97.2 0.0025 8.6E-08 57.4 11.0 98 56-194 110-222 (281)
257 1o66_A 3-methyl-2-oxobutanoate 97.2 0.0044 1.5E-07 55.6 12.3 107 47-194 80-204 (275)
258 3zen_D Fatty acid synthase; tr 97.2 0.0011 3.9E-08 76.6 10.3 144 43-222 480-654 (3089)
259 4fo4_A Inosine 5'-monophosphat 97.1 0.0029 1E-07 59.3 11.3 97 98-214 80-177 (366)
260 2qiw_A PEP phosphonomutase; st 97.1 0.0064 2.2E-07 54.1 12.7 140 46-216 81-238 (255)
261 2yci_X 5-methyltetrahydrofolat 97.1 0.0052 1.8E-07 55.2 12.2 75 56-153 32-109 (271)
262 3s5s_A Mandelate racemase/muco 97.1 0.0033 1.1E-07 59.4 11.2 135 45-215 133-272 (389)
263 3u9i_A Mandelate racemase/muco 97.1 0.0028 9.5E-08 60.0 10.4 144 46-217 155-303 (393)
264 2chr_A Chloromuconate cycloiso 97.0 0.012 4E-07 55.0 14.5 138 48-221 134-276 (370)
265 3exr_A RMPD (hexulose-6-phosph 97.0 0.011 3.8E-07 51.4 13.2 135 50-222 65-204 (221)
266 3iv3_A Tagatose 1,6-diphosphat 97.0 0.013 4.6E-07 54.0 14.2 149 63-221 115-287 (332)
267 1ypf_A GMP reductase; GUAC, pu 96.9 0.0051 1.7E-07 56.9 10.8 96 97-213 78-176 (336)
268 3r2g_A Inosine 5'-monophosphat 96.9 0.0019 6.5E-08 60.4 7.3 69 133-214 100-169 (361)
269 4h83_A Mandelate racemase/muco 96.9 0.0045 1.5E-07 58.4 10.1 126 54-214 162-291 (388)
270 3khj_A Inosine-5-monophosphate 96.9 0.0072 2.5E-07 56.5 11.3 94 98-214 79-173 (361)
271 1vc4_A Indole-3-glycerol phosp 96.8 0.0082 2.8E-07 53.4 11.0 82 133-229 66-148 (254)
272 2ozt_A TLR1174 protein; struct 96.8 0.017 5.8E-07 53.2 13.4 124 55-214 115-245 (332)
273 1wue_A Mandelate racemase/muco 96.8 0.0082 2.8E-07 56.5 11.4 135 47-221 151-289 (386)
274 3kts_A Glycerol uptake operon 96.8 0.0045 1.5E-07 52.7 8.5 69 135-221 117-186 (192)
275 3va8_A Probable dehydratase; e 96.8 0.0081 2.8E-07 57.8 11.3 121 55-214 190-314 (445)
276 1m3u_A 3-methyl-2-oxobutanoate 96.8 0.0057 1.9E-07 54.6 9.3 149 4-193 25-203 (264)
277 1f6y_A 5-methyltetrahydrofolat 96.8 0.022 7.4E-07 50.9 13.2 96 56-191 23-121 (262)
278 3vdg_A Probable glucarate dehy 96.8 0.011 3.9E-07 56.7 12.1 121 55-214 192-316 (445)
279 4h1z_A Enolase Q92ZS5; dehydra 96.8 0.012 4E-07 56.0 12.1 124 53-213 185-312 (412)
280 3qld_A Mandelate racemase/muco 96.8 0.02 6.9E-07 53.9 13.6 139 44-222 136-278 (388)
281 3q58_A N-acetylmannosamine-6-p 96.7 0.059 2E-06 47.0 15.4 120 56-213 34-155 (229)
282 3ru6_A Orotidine 5'-phosphate 96.7 0.12 4.1E-06 47.0 17.4 143 45-224 76-240 (303)
283 3cyj_A Mandelate racemase/muco 96.6 0.042 1.4E-06 51.3 14.4 132 46-214 132-270 (372)
284 3vc5_A Mandelate racemase/muco 96.6 0.017 5.7E-07 55.5 11.7 120 55-213 187-310 (441)
285 3igs_A N-acetylmannosamine-6-p 96.6 0.13 4.6E-06 44.8 16.6 129 47-213 19-155 (232)
286 3qja_A IGPS, indole-3-glycerol 96.5 0.0083 2.8E-07 53.9 8.9 76 134-222 74-150 (272)
287 3o1n_A 3-dehydroquinate dehydr 96.5 0.14 4.8E-06 45.9 16.8 98 45-153 38-141 (276)
288 3tsm_A IGPS, indole-3-glycerol 96.5 0.0097 3.3E-07 53.5 9.1 74 134-220 81-155 (272)
289 4hpn_A Putative uncharacterize 96.5 0.026 9E-07 52.8 12.5 121 57-214 145-269 (378)
290 3ve9_A Orotidine-5'-phosphate 96.5 0.03 1E-06 48.5 11.9 138 45-224 50-190 (215)
291 3m47_A Orotidine 5'-phosphate 96.5 0.075 2.6E-06 46.3 14.4 142 46-224 65-212 (228)
292 1m3u_A 3-methyl-2-oxobutanoate 96.5 0.12 4E-06 46.1 15.7 97 49-154 19-116 (264)
293 3vav_A 3-methyl-2-oxobutanoate 96.4 0.16 5.5E-06 45.5 16.3 119 45-192 28-148 (275)
294 4h2h_A Mandelate racemase/muco 96.4 0.034 1.2E-06 52.1 12.6 131 45-214 139-274 (376)
295 4aaj_A N-(5'-phosphoribosyl)an 96.4 0.072 2.5E-06 46.5 13.8 134 46-218 71-206 (228)
296 1o66_A 3-methyl-2-oxobutanoate 96.4 0.11 3.8E-06 46.5 14.9 97 50-154 20-117 (275)
297 3vav_A 3-methyl-2-oxobutanoate 96.4 0.022 7.6E-07 51.1 10.4 111 44-193 89-215 (275)
298 2vc6_A MOSA, dihydrodipicolina 96.3 0.043 1.5E-06 49.6 12.4 127 55-206 18-152 (292)
299 3ijl_A Muconate cycloisomerase 96.3 0.024 8.1E-07 52.4 10.8 131 50-219 128-258 (338)
300 1p4c_A L(+)-mandelate dehydrog 96.3 0.0019 6.4E-08 61.0 3.1 44 169-214 209-253 (380)
301 1h1y_A D-ribulose-5-phosphate 96.2 0.044 1.5E-06 47.5 11.5 132 46-214 7-145 (228)
302 2r8w_A AGR_C_1641P; APC7498, d 96.2 0.067 2.3E-06 49.3 13.0 127 55-206 52-186 (332)
303 2rfg_A Dihydrodipicolinate syn 96.1 0.065 2.2E-06 48.6 12.6 127 55-206 18-152 (297)
304 2b7n_A Probable nicotinate-nuc 96.1 0.024 8.2E-07 50.9 9.5 94 103-223 169-266 (273)
305 3d0c_A Dihydrodipicolinate syn 96.1 0.047 1.6E-06 49.9 11.7 124 55-205 30-158 (314)
306 4fxs_A Inosine-5'-monophosphat 96.1 0.015 5.2E-07 56.6 8.8 67 135-214 233-300 (496)
307 1xky_A Dihydrodipicolinate syn 96.1 0.047 1.6E-06 49.6 11.5 126 55-205 30-163 (301)
308 4avf_A Inosine-5'-monophosphat 96.1 0.015 5.2E-07 56.5 8.6 68 134-214 230-298 (490)
309 3ih1_A Methylisocitrate lyase; 96.1 0.04 1.4E-06 50.2 10.7 166 49-231 31-210 (305)
310 3na8_A Putative dihydrodipicol 96.0 0.042 1.4E-06 50.3 10.8 85 55-154 42-128 (315)
311 3flu_A DHDPS, dihydrodipicolin 96.0 0.056 1.9E-06 49.0 11.5 126 55-205 25-158 (297)
312 4dbe_A Orotidine 5'-phosphate 96.0 0.1 3.6E-06 45.2 12.8 140 45-222 52-195 (222)
313 3qze_A DHDPS, dihydrodipicolin 96.0 0.052 1.8E-06 49.7 11.2 127 54-205 40-174 (314)
314 3b4u_A Dihydrodipicolinate syn 96.0 0.061 2.1E-06 48.7 11.5 127 55-205 21-158 (294)
315 3lab_A Putative KDPG (2-keto-3 96.0 0.05 1.7E-06 47.1 10.3 91 115-229 13-104 (217)
316 1qap_A Quinolinic acid phospho 96.0 0.046 1.6E-06 49.6 10.6 91 102-222 195-288 (296)
317 1dbt_A Orotidine 5'-phosphate 96.0 0.24 8.2E-06 43.2 15.0 137 48-222 59-222 (239)
318 3nl6_A Thiamine biosynthetic b 95.9 0.023 7.8E-07 56.0 9.1 83 137-225 120-220 (540)
319 3e96_A Dihydrodipicolinate syn 95.9 0.049 1.7E-06 49.8 10.8 126 55-206 30-159 (316)
320 1o5k_A DHDPS, dihydrodipicolin 95.9 0.052 1.8E-06 49.4 10.9 126 55-205 30-163 (306)
321 1zfj_A Inosine monophosphate d 95.9 0.03 1E-06 54.2 9.8 70 134-216 234-304 (491)
322 3tak_A DHDPS, dihydrodipicolin 95.9 0.059 2E-06 48.7 11.1 126 55-205 19-152 (291)
323 3fok_A Uncharacterized protein 95.9 0.11 3.7E-06 47.1 12.6 122 65-219 135-278 (307)
324 2v9d_A YAGE; dihydrodipicolini 95.9 0.051 1.7E-06 50.4 10.8 126 55-205 49-182 (343)
325 3si9_A DHDPS, dihydrodipicolin 95.9 0.056 1.9E-06 49.5 10.9 85 54-153 39-125 (315)
326 4af0_A Inosine-5'-monophosphat 95.9 0.021 7.1E-07 55.8 8.3 71 133-216 281-352 (556)
327 3tr2_A Orotidine 5'-phosphate 95.9 0.34 1.2E-05 42.4 15.5 144 45-225 59-227 (239)
328 4e38_A Keto-hydroxyglutarate-a 95.8 0.084 2.9E-06 46.2 11.0 117 104-249 26-143 (232)
329 1hg3_A Triosephosphate isomera 95.7 0.3 1E-05 42.5 14.4 135 65-228 82-219 (225)
330 3p0w_A Mandelate racemase/muco 95.7 0.057 2E-06 52.2 10.8 123 54-213 198-328 (470)
331 2opj_A O-succinylbenzoate-COA 95.7 0.043 1.5E-06 50.5 9.4 136 47-221 71-210 (327)
332 1vqt_A Orotidine 5'-phosphate 95.7 0.076 2.6E-06 45.8 10.4 136 45-228 58-206 (213)
333 3daq_A DHDPS, dihydrodipicolin 95.7 0.068 2.3E-06 48.3 10.6 125 56-205 21-153 (292)
334 2yxg_A DHDPS, dihydrodipicolin 95.7 0.11 3.6E-06 46.9 11.8 126 55-205 18-151 (289)
335 3mzn_A Glucarate dehydratase; 95.7 0.084 2.9E-06 50.7 11.6 123 54-213 180-310 (450)
336 3l21_A DHDPS, dihydrodipicolin 95.7 0.089 3E-06 47.9 11.3 127 54-205 32-166 (304)
337 2gjl_A Hypothetical protein PA 95.7 0.11 3.7E-06 47.6 11.9 95 97-215 50-147 (328)
338 3usb_A Inosine-5'-monophosphat 95.7 0.055 1.9E-06 52.8 10.5 69 134-215 257-326 (511)
339 3eb2_A Putative dihydrodipicol 95.6 0.049 1.7E-06 49.5 9.4 84 55-153 22-107 (300)
340 3m5v_A DHDPS, dihydrodipicolin 95.6 0.12 4E-06 46.9 11.9 126 55-205 25-159 (301)
341 1oy0_A Ketopantoate hydroxymet 95.6 0.4 1.4E-05 43.0 15.0 98 49-154 36-135 (281)
342 3tfx_A Orotidine 5'-phosphate 95.6 0.67 2.3E-05 41.1 16.4 141 45-222 56-224 (259)
343 2ojp_A DHDPS, dihydrodipicolin 95.6 0.059 2E-06 48.7 9.6 126 55-205 19-152 (292)
344 2ehh_A DHDPS, dihydrodipicolin 95.6 0.13 4.3E-06 46.5 11.8 126 55-205 18-151 (294)
345 2jbm_A Nicotinate-nucleotide p 95.5 0.041 1.4E-06 50.0 8.5 70 138-223 210-281 (299)
346 3v5c_A Mandelate racemase/muco 95.5 0.045 1.5E-06 51.6 8.9 128 57-214 149-285 (392)
347 3fkr_A L-2-keto-3-deoxyarabona 95.5 0.1 3.5E-06 47.5 11.0 129 55-206 26-162 (309)
348 3a5f_A Dihydrodipicolinate syn 95.5 0.054 1.8E-06 48.9 9.0 84 55-153 19-104 (291)
349 1p0k_A Isopentenyl-diphosphate 95.4 1.1 3.7E-05 41.2 18.0 91 112-214 114-209 (349)
350 1jcn_A Inosine monophosphate d 95.4 0.034 1.1E-06 54.3 8.0 69 134-215 256-325 (514)
351 2hjp_A Phosphonopyruvate hydro 95.4 0.14 4.7E-06 46.4 11.5 170 50-231 18-202 (290)
352 2yyu_A Orotidine 5'-phosphate 95.4 0.23 7.9E-06 43.5 12.6 138 48-223 60-224 (246)
353 2wkj_A N-acetylneuraminate lya 95.4 0.2 7E-06 45.4 12.6 127 55-206 29-164 (303)
354 3iwp_A Copper homeostasis prot 95.4 0.42 1.4E-05 42.9 14.3 139 47-214 39-186 (287)
355 3cpr_A Dihydrodipicolinate syn 95.4 0.18 6.1E-06 45.8 12.2 126 55-205 34-167 (304)
356 3bo9_A Putative nitroalkan dio 95.3 0.19 6.4E-06 46.1 12.2 91 98-215 61-153 (326)
357 1f6k_A N-acetylneuraminate lya 95.3 0.13 4.6E-06 46.3 11.1 126 55-205 21-155 (293)
358 1f8m_A Isocitrate lyase, ICL; 95.3 0.57 1.9E-05 44.5 15.6 155 45-218 148-352 (429)
359 1x1o_A Nicotinate-nucleotide p 95.3 0.13 4.5E-06 46.4 10.8 66 138-222 209-276 (286)
360 4h3d_A 3-dehydroquinate dehydr 95.3 0.17 5.7E-06 45.0 11.4 97 45-152 18-120 (258)
361 3k13_A 5-methyltetrahydrofolat 95.3 0.12 4.2E-06 46.9 10.6 55 56-122 35-92 (300)
362 1y0e_A Putative N-acetylmannos 95.2 0.11 3.7E-06 44.5 9.9 99 104-215 46-147 (223)
363 1eix_A Orotidine 5'-monophosph 95.2 0.79 2.7E-05 40.0 15.7 137 48-223 70-230 (245)
364 1jpd_X L-Ala-D/L-Glu epimerase 95.2 0.095 3.2E-06 47.9 10.0 124 50-214 126-250 (324)
365 3lmz_A Putative sugar isomeras 95.2 0.42 1.4E-05 41.4 13.9 130 46-207 18-153 (257)
366 3p6l_A Sugar phosphate isomera 95.2 0.52 1.8E-05 40.8 14.4 135 47-206 11-153 (262)
367 3ldv_A Orotidine 5'-phosphate 95.2 0.48 1.6E-05 41.9 14.1 146 45-227 78-247 (255)
368 3tr9_A Dihydropteroate synthas 95.2 0.045 1.5E-06 50.1 7.5 61 55-122 46-113 (314)
369 3eoo_A Methylisocitrate lyase; 95.2 0.13 4.4E-06 46.7 10.5 166 50-231 25-206 (298)
370 1vrd_A Inosine-5'-monophosphat 95.2 0.041 1.4E-06 53.3 7.7 69 134-215 238-307 (494)
371 3f4w_A Putative hexulose 6 pho 95.2 0.34 1.2E-05 40.9 12.8 122 55-216 10-136 (211)
372 3ffs_A Inosine-5-monophosphate 95.2 0.079 2.7E-06 50.1 9.4 66 135-214 146-212 (400)
373 1o4u_A Type II quinolic acid p 95.2 0.056 1.9E-06 48.8 8.0 94 103-223 180-277 (285)
374 1vs1_A 3-deoxy-7-phosphoheptul 95.1 0.42 1.5E-05 42.8 13.7 139 56-216 87-244 (276)
375 2yr1_A 3-dehydroquinate dehydr 95.1 1 3.6E-05 39.7 16.1 96 47-153 21-122 (257)
376 1s2w_A Phosphoenolpyruvate pho 95.1 0.18 6.2E-06 45.6 11.2 169 52-232 24-207 (295)
377 1xg4_A Probable methylisocitra 95.1 0.25 8.4E-06 44.8 12.0 98 50-155 20-117 (295)
378 3qw3_A Orotidine-5-phosphate d 95.1 0.94 3.2E-05 40.0 15.6 139 44-222 75-236 (255)
379 3bw2_A 2-nitropropane dioxygen 95.0 0.29 9.7E-06 45.5 12.8 99 97-215 45-174 (369)
380 2ze3_A DFA0005; organic waste 95.0 0.16 5.6E-06 45.5 10.5 164 49-231 18-203 (275)
381 1w0m_A TIM, triosephosphate is 95.0 0.4 1.4E-05 41.7 12.6 132 64-226 78-214 (226)
382 1zco_A 2-dehydro-3-deoxyphosph 94.9 0.34 1.2E-05 43.1 12.3 141 54-216 70-229 (262)
383 3s5o_A 4-hydroxy-2-oxoglutarat 94.9 0.24 8.3E-06 45.0 11.6 127 55-205 32-167 (307)
384 2nuw_A 2-keto-3-deoxygluconate 94.9 0.32 1.1E-05 43.7 12.3 124 55-204 17-147 (288)
385 1nsj_A PRAI, phosphoribosyl an 94.8 0.53 1.8E-05 40.2 13.0 175 2-222 8-188 (205)
386 4adt_A Pyridoxine biosynthetic 94.8 0.082 2.8E-06 48.0 8.2 86 135-229 31-121 (297)
387 2r91_A 2-keto-3-deoxy-(6-phosp 94.8 0.33 1.1E-05 43.5 12.2 123 55-203 16-145 (286)
388 3pfr_A Mandelate racemase/muco 94.8 0.15 5.1E-06 49.0 10.5 122 55-213 184-313 (455)
389 2wqp_A Polysialic acid capsule 94.8 0.6 2.1E-05 43.2 14.1 133 54-209 87-231 (349)
390 1qwg_A PSL synthase;, (2R)-pho 94.8 0.4 1.4E-05 42.2 12.2 106 59-184 86-197 (251)
391 1o60_A 2-dehydro-3-deoxyphosph 94.8 0.19 6.5E-06 45.5 10.4 140 57-217 75-242 (292)
392 1vr6_A Phospho-2-dehydro-3-deo 94.7 0.29 1E-05 45.3 11.8 139 56-216 155-312 (350)
393 1aj0_A DHPS, dihydropteroate s 94.6 0.069 2.4E-06 48.1 7.2 60 56-122 36-98 (282)
394 2qkf_A 3-deoxy-D-manno-octulos 94.6 0.27 9.4E-06 44.1 11.1 114 57-192 72-196 (280)
395 2vef_A Dihydropteroate synthas 94.6 0.073 2.5E-06 48.7 7.4 60 56-122 31-93 (314)
396 2vc6_A MOSA, dihydrodipicolina 94.6 2.3 7.8E-05 38.1 17.3 149 43-232 67-222 (292)
397 1qpo_A Quinolinate acid phosph 94.6 0.13 4.5E-06 46.3 8.9 71 136-222 205-277 (284)
398 3q94_A Fructose-bisphosphate a 94.6 0.77 2.6E-05 41.3 13.9 116 94-217 115-239 (288)
399 3c2e_A Nicotinate-nucleotide p 94.6 0.041 1.4E-06 49.9 5.5 69 139-223 213-286 (294)
400 1q7z_A 5-methyltetrahydrofolat 94.6 0.21 7E-06 49.4 11.0 70 57-149 339-410 (566)
401 3i4e_A Isocitrate lyase; struc 94.5 1.6 5.6E-05 41.4 16.4 155 46-219 153-357 (439)
402 1w3i_A EDA, 2-keto-3-deoxy glu 94.5 0.38 1.3E-05 43.4 11.7 123 55-203 17-146 (293)
403 3qfe_A Putative dihydrodipicol 94.5 0.25 8.5E-06 45.1 10.6 127 56-206 30-166 (318)
404 1rvg_A Fructose-1,6-bisphospha 94.4 1.2 4.1E-05 40.4 14.8 107 95-207 108-223 (305)
405 3sz8_A 2-dehydro-3-deoxyphosph 94.4 0.33 1.1E-05 43.6 11.1 108 91-214 116-241 (285)
406 3b8i_A PA4872 oxaloacetate dec 94.4 0.65 2.2E-05 41.8 12.9 167 51-231 25-203 (287)
407 1zlp_A PSR132, petal death pro 94.3 0.29 1E-05 44.7 10.7 168 50-231 42-224 (318)
408 1eep_A Inosine 5'-monophosphat 94.3 0.09 3.1E-06 49.6 7.6 67 135-214 155-222 (404)
409 1u83_A Phosphosulfolactate syn 94.3 0.11 3.6E-06 46.4 7.4 80 60-156 112-196 (276)
410 1qwg_A PSL synthase;, (2R)-pho 94.3 1.5 5.1E-05 38.5 14.6 137 54-221 22-182 (251)
411 1vkf_A Glycerol uptake operon 94.2 0.12 4.1E-06 43.6 7.1 145 38-221 24-184 (188)
412 1v5x_A PRA isomerase, phosphor 94.2 0.74 2.5E-05 39.2 12.3 171 2-222 7-182 (203)
413 3h5d_A DHDPS, dihydrodipicolin 94.2 0.28 9.5E-06 44.7 10.2 126 55-205 25-159 (311)
414 3lg3_A Isocitrate lyase; conse 94.2 1.4 4.8E-05 41.8 15.2 154 46-218 153-356 (435)
415 1gox_A (S)-2-hydroxy-acid oxid 94.1 0.42 1.4E-05 44.5 11.5 100 109-214 117-253 (370)
416 3ajx_A 3-hexulose-6-phosphate 94.1 0.65 2.2E-05 39.0 11.8 84 48-155 3-87 (207)
417 1tx2_A DHPS, dihydropteroate s 94.0 0.16 5.4E-06 46.1 8.2 71 45-122 38-123 (297)
418 3dz1_A Dihydrodipicolinate syn 94.0 0.91 3.1E-05 41.2 13.3 127 55-206 26-160 (313)
419 3sr7_A Isopentenyl-diphosphate 94.0 0.19 6.4E-06 46.9 8.7 108 91-213 123-236 (365)
420 2z6i_A Trans-2-enoyl-ACP reduc 93.9 0.42 1.4E-05 43.7 11.0 91 98-215 47-139 (332)
421 1yxy_A Putative N-acetylmannos 93.9 0.43 1.5E-05 41.1 10.4 97 104-211 59-157 (234)
422 3eol_A Isocitrate lyase; seatt 93.9 1.9 6.5E-05 40.9 15.4 154 45-218 145-351 (433)
423 3hgj_A Chromate reductase; TIM 93.8 0.52 1.8E-05 43.5 11.4 111 43-184 217-335 (349)
424 2okt_A OSB synthetase, O-succi 93.7 0.39 1.3E-05 44.1 10.4 134 47-227 121-257 (342)
425 1vli_A Spore coat polysacchari 93.7 1 3.4E-05 42.3 13.1 132 55-209 98-243 (385)
426 2c6q_A GMP reductase 2; TIM ba 93.7 0.17 5.7E-06 47.0 7.8 67 135-214 120-189 (351)
427 3na8_A Putative dihydrodipicol 93.7 4 0.00014 37.0 20.3 149 43-232 91-246 (315)
428 1twd_A Copper homeostasis prot 93.6 1.6 5.5E-05 38.5 13.6 87 52-155 6-96 (256)
429 2isw_A Putative fructose-1,6-b 93.6 1 3.6E-05 41.1 12.8 107 95-207 111-225 (323)
430 2hmc_A AGR_L_411P, dihydrodipi 93.5 0.5 1.7E-05 43.7 10.7 124 55-204 44-174 (344)
431 3jr2_A Hexulose-6-phosphate sy 93.5 1.6 5.4E-05 37.2 13.2 127 47-215 8-140 (218)
432 3g8r_A Probable spore coat pol 93.4 0.94 3.2E-05 41.9 12.3 112 58-192 78-200 (350)
433 1wa3_A 2-keto-3-deoxy-6-phosph 93.4 0.22 7.4E-06 42.0 7.5 82 115-217 10-92 (205)
434 2wqp_A Polysialic acid capsule 93.4 2.4 8.3E-05 39.1 15.0 131 48-207 22-169 (349)
435 1vli_A Spore coat polysacchari 93.4 1.7 5.9E-05 40.6 14.1 142 46-216 28-193 (385)
436 3fs2_A 2-dehydro-3-deoxyphosph 93.3 0.61 2.1E-05 42.2 10.5 139 54-215 94-261 (298)
437 1zco_A 2-dehydro-3-deoxyphosph 93.2 1.6 5.3E-05 38.7 13.1 126 56-216 35-167 (262)
438 1sfl_A 3-dehydroquinate dehydr 93.1 0.46 1.6E-05 41.5 9.4 96 47-154 5-106 (238)
439 1vhc_A Putative KHG/KDPG aldol 93.1 0.89 3E-05 39.3 11.1 98 105-229 10-108 (224)
440 1kko_A 3-methylaspartate ammon 93.1 0.13 4.3E-06 48.8 6.1 106 102-222 218-339 (413)
441 3mcm_A 2-amino-4-hydroxy-6-hyd 93.0 0.38 1.3E-05 45.9 9.3 77 55-149 209-296 (442)
442 1jub_A Dihydroorotate dehydrog 92.9 1.6 5.4E-05 39.2 13.1 139 63-213 28-191 (311)
443 3noy_A 4-hydroxy-3-methylbut-2 92.9 1.2 4.3E-05 41.1 12.1 129 114-261 29-176 (366)
444 1eye_A DHPS 1, dihydropteroate 92.9 0.37 1.3E-05 43.3 8.5 60 55-122 26-88 (280)
445 2ftp_A Hydroxymethylglutaryl-C 92.9 0.68 2.3E-05 41.8 10.4 145 55-216 84-237 (302)
446 3fa4_A 2,3-dimethylmalate lyas 92.8 0.66 2.3E-05 42.0 10.1 156 63-231 30-205 (302)
447 1kcz_A Beta-methylaspartase; b 92.8 0.066 2.3E-06 50.8 3.7 104 102-222 218-339 (413)
448 2qiw_A PEP phosphonomutase; st 92.8 0.67 2.3E-05 41.0 10.0 84 63-155 32-116 (255)
449 3sgz_A Hydroxyacid oxidase 2; 92.7 0.46 1.6E-05 44.1 9.2 42 170-213 202-244 (352)
450 2v82_A 2-dehydro-3-deoxy-6-pho 92.7 0.39 1.3E-05 40.7 8.1 81 114-215 6-88 (212)
451 2vp8_A Dihydropteroate synthas 92.6 0.26 9.1E-06 45.0 7.3 72 46-122 41-125 (318)
452 2y5s_A DHPS, dihydropteroate s 92.6 0.38 1.3E-05 43.5 8.3 59 56-122 44-105 (294)
453 3n9r_A Fructose-bisphosphate a 92.6 2.5 8.5E-05 38.3 13.7 107 95-207 110-225 (307)
454 3m5v_A DHDPS, dihydrodipicolin 92.6 0.33 1.1E-05 43.9 7.9 85 131-222 27-118 (301)
455 2yxg_A DHDPS, dihydrodipicolin 92.6 0.4 1.4E-05 43.0 8.4 85 131-222 20-110 (289)
456 3a5f_A Dihydrodipicolinate syn 92.5 0.38 1.3E-05 43.3 8.2 85 131-222 21-111 (291)
457 3cpr_A Dihydrodipicolinate syn 92.5 0.45 1.5E-05 43.1 8.7 85 131-222 36-126 (304)
458 3l21_A DHDPS, dihydrodipicolin 92.5 0.48 1.6E-05 43.0 8.8 85 131-222 35-125 (304)
459 2wkj_A N-acetylneuraminate lya 92.5 0.48 1.6E-05 42.9 8.8 85 131-222 31-121 (303)
460 1ydn_A Hydroxymethylglutaryl-C 92.4 0.89 3E-05 40.7 10.6 193 4-214 24-231 (295)
461 3noy_A 4-hydroxy-3-methylbut-2 92.4 3 0.0001 38.5 13.9 84 44-155 28-115 (366)
462 2ehh_A DHDPS, dihydrodipicolin 92.4 0.41 1.4E-05 43.1 8.2 85 131-222 20-110 (294)
463 1xky_A Dihydrodipicolinate syn 92.4 0.48 1.7E-05 42.8 8.7 85 131-222 32-122 (301)
464 3daq_A DHDPS, dihydrodipicolin 92.4 0.42 1.4E-05 43.0 8.2 85 131-222 22-112 (292)
465 4hb7_A Dihydropteroate synthas 92.4 1.3 4.3E-05 39.5 11.1 76 56-150 28-106 (270)
466 3nvt_A 3-deoxy-D-arabino-heptu 92.3 0.97 3.3E-05 42.4 10.9 106 92-213 232-345 (385)
467 3b4u_A Dihydrodipicolinate syn 92.3 0.55 1.9E-05 42.3 9.0 84 131-221 23-113 (294)
468 2ojp_A DHDPS, dihydrodipicolin 92.3 0.45 1.5E-05 42.8 8.4 85 131-222 21-111 (292)
469 3gr7_A NADPH dehydrogenase; fl 92.3 0.84 2.9E-05 42.0 10.4 108 45-184 209-324 (340)
470 3g8r_A Probable spore coat pol 92.3 4.6 0.00016 37.3 15.2 131 48-207 8-156 (350)
471 4aaj_A N-(5'-phosphoribosyl)an 92.2 4.7 0.00016 34.8 14.5 127 43-214 16-153 (228)
472 1mxs_A KDPG aldolase; 2-keto-3 92.2 1 3.4E-05 39.0 10.2 90 101-214 15-105 (225)
473 1f6k_A N-acetylneuraminate lya 92.2 0.54 1.9E-05 42.3 8.8 85 131-222 23-114 (293)
474 1nsj_A PRAI, phosphoribosyl an 92.2 2.7 9.3E-05 35.7 12.8 122 49-214 3-126 (205)
475 3flu_A DHDPS, dihydrodipicolin 92.2 0.51 1.8E-05 42.5 8.6 85 131-222 27-117 (297)
476 3dz1_A Dihydrodipicolinate syn 92.1 0.7 2.4E-05 42.0 9.6 80 131-217 28-112 (313)
477 1gvf_A Tagatose-bisphosphate a 92.1 2.7 9.3E-05 37.7 13.2 115 95-217 110-235 (286)
478 2r8w_A AGR_C_1641P; APC7498, d 92.1 0.47 1.6E-05 43.6 8.4 85 131-222 54-144 (332)
479 3qze_A DHDPS, dihydrodipicolin 92.1 0.46 1.6E-05 43.3 8.3 85 131-222 43-133 (314)
480 1m5w_A Pyridoxal phosphate bio 92.1 0.68 2.3E-05 40.4 8.8 141 60-219 27-220 (243)
481 1q7z_A 5-methyltetrahydrofolat 92.1 0.65 2.2E-05 45.8 9.9 112 18-149 140-269 (566)
482 3qw4_B UMP synthase; N-termina 92.1 2.4 8.1E-05 40.6 13.6 140 44-223 76-238 (453)
483 3tqp_A Enolase; energy metabol 92.1 0.61 2.1E-05 44.4 9.3 101 97-214 216-337 (428)
484 2nli_A Lactate oxidase; flavoe 92.0 0.67 2.3E-05 43.2 9.5 94 114-213 132-256 (368)
485 2rfg_A Dihydrodipicolinate syn 92.0 0.38 1.3E-05 43.4 7.6 85 131-222 20-110 (297)
486 3tak_A DHDPS, dihydrodipicolin 92.0 0.52 1.8E-05 42.3 8.4 85 131-222 21-111 (291)
487 4g8t_A Glucarate dehydratase; 92.0 1.3 4.4E-05 42.5 11.6 125 56-213 202-330 (464)
488 3lye_A Oxaloacetate acetyl hyd 91.9 1.1 3.6E-05 40.8 10.4 87 63-155 37-126 (307)
489 1o5k_A DHDPS, dihydrodipicolin 91.9 0.49 1.7E-05 42.9 8.2 85 131-222 32-122 (306)
490 2h9a_B CO dehydrogenase/acetyl 91.9 0.51 1.7E-05 43.0 8.3 116 44-193 44-180 (310)
491 2cw6_A Hydroxymethylglutaryl-C 91.9 0.41 1.4E-05 43.2 7.6 143 55-214 81-232 (298)
492 2v9d_A YAGE; dihydrodipicolini 91.8 0.53 1.8E-05 43.5 8.4 85 131-222 51-141 (343)
493 1wv2_A Thiazole moeity, thiazo 91.8 1.3 4.6E-05 39.1 10.5 120 10-154 94-218 (265)
494 1vr6_A Phospho-2-dehydro-3-deo 91.8 4.1 0.00014 37.6 14.3 127 56-217 118-251 (350)
495 2bdq_A Copper homeostasis prot 91.7 1.4 4.8E-05 38.1 10.4 124 65-213 15-152 (224)
496 2zbt_A Pyridoxal biosynthesis 91.7 0.52 1.8E-05 42.2 8.1 86 135-229 31-121 (297)
497 3tqv_A Nicotinate-nucleotide p 91.7 0.93 3.2E-05 40.8 9.6 68 136-222 209-278 (287)
498 3eb2_A Putative dihydrodipicol 91.6 7.2 0.00025 34.9 19.9 152 43-232 71-225 (300)
499 1kbi_A Cytochrome B2, L-LCR; f 91.6 1.3 4.6E-05 43.0 11.4 93 115-213 247-370 (511)
500 3si9_A DHDPS, dihydrodipicolin 91.6 0.48 1.6E-05 43.2 7.7 85 131-222 42-132 (315)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=4e-62 Score=461.47 Aligned_cols=301 Identities=39% Similarity=0.669 Sum_probs=269.6
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEecceeccccc-CCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEecc
Q psy2386 1 MNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-GNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC 79 (311)
Q Consensus 1 ~~~td~~fR~l~~~~g~~~l~~temv~a~~l~-~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~ 79 (311)
.|+||.+||.+|+.+|+.+++||||++++.++ ++..+++++++.+.|+++||+|++|+.|++||++++++|||+||||+
T Consensus 12 ~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~ 91 (350)
T 3b0p_A 12 VDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNL 91 (350)
T ss_dssp TTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 37999999999999997699999999999988 65556777888999999999999999999999999999999999999
Q ss_pred CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy2386 80 GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLK 159 (311)
Q Consensus 80 gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~ 159 (311)
|||++++++++||++|+++++++.+|++++++++++||+||+|+||++..+.+++.++++.++++|+++|+||+|+. .+
T Consensus 92 gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~-~~ 170 (350)
T 3b0p_A 92 GCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSA-LL 170 (350)
T ss_dssp CCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCB-C-
T ss_pred cCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCch-hc
Confidence 99999999999999999999999999999999999999999999999876666788999999999999999999987 35
Q ss_pred cCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhCCcchHHhHhhhccCCCCCC
Q psy2386 160 KLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNYYSNLPQYK 239 (311)
Q Consensus 160 G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~ 239 (311)
|++|+.+++.++.+|++++++++.+|++|||+||||.|++|+.++++.||+||+||+++.|||+|+++.+.+++ .. +
T Consensus 171 g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~GaD~V~iGRa~l~~P~l~~~i~~~l~~-~~--~ 247 (350)
T 3b0p_A 171 ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFG-LP--R 247 (350)
T ss_dssp ---------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHTTSSEEEECHHHHHCGGGGTTHHHHTTC-CS--C
T ss_pred ccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHhCCCEEEECHHHHhCcHHHHHHHHHhcC-CC--C
Confidence 78877666677889999999999986899999999999999999998899999999999999999999988876 32 5
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCcccHHHHHHhHHHHhccCCCcHHHHHHHhCCCCCCCChHHHHHHhh
Q psy2386 240 IPTRIDIINRMILYIRQQLNNNKIKNINSITRHMLGLMKNIKGSNKFKQILSKPNLLTIDNFQFFLNTL 308 (311)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~k~~~~~~~g~~~~~~~r~~l~~~~~~~~~~~~~l~~~~ 308 (311)
++++.++++.+++|++.++++| ..+..+|||+.||++|+|++++||+.|++.++.. ++.++|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~kh~~~~~~g~~~~~~~r~~l~~~~~~~-~~~~~l~~~~ 313 (350)
T 3b0p_A 248 RPSRLEVARRMRAYLEEEVLKG--TPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQ-ALDRALRLME 313 (350)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHT--CCHHHHHTTSTTTTTTSTTHHHHHHHHHHHCSHH-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcC--ccHHHHHHHHHHHHccCCCHHHHHHHHHCCCCHH-HHHHHHHHHh
Confidence 7899999999999999988877 4689999999999999999999999999999888 8888887753
No 2
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=3.8e-56 Score=415.74 Aligned_cols=287 Identities=21% Similarity=0.361 Sum_probs=257.9
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEecceeccccc-CC--chhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEe
Q psy2386 1 MNLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-GN--KKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINL 77 (311)
Q Consensus 1 ~~~td~~fR~l~~~~g~~~l~~temv~a~~l~-~~--~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~Idi 77 (311)
.|+||.+||.+|+++|+ ++++|||++++.+. ++ ..+.+ .++.+.|+++||+|++|+.|++||++++++ ||+|||
T Consensus 13 ~~~t~~~~r~~~~~~G~-gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iei 89 (318)
T 1vhn_A 13 AGYTDSAFRTLAFEWGA-DFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILSEK-YKWIDL 89 (318)
T ss_dssp TTTCSHHHHHHHHTTTC-CCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEE
T ss_pred CCCCcHHHHHHHHHHCc-CEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEE
Confidence 37899999999999995 99999999998876 43 34556 788899999999999999999999999999 999999
Q ss_pred ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy2386 78 NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF 157 (311)
Q Consensus 78 N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~ 157 (311)
|+|||+++++++++|++|+++|+++.++++++++.+++||+||+|.||+..+. .++++.++++|+|+|+||+|+.
T Consensus 90 n~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~----~~~a~~l~~~G~d~i~v~g~~~- 164 (318)
T 1vhn_A 90 NAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEV----EEIYRILVEEGVDEVFIHTRTV- 164 (318)
T ss_dssp EECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCH----HHHHHHHHHTTCCEEEEESSCT-
T ss_pred ECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHH----HHHHHHHHHhCCCEEEEcCCCc-
Confidence 99999999999999999999999999999999999999999999999987653 4899999999999999999986
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHh-h-cCEEEEehhhhhCCcchHHhHhhhccCC
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLN-Y-IDGVMLGREAYKNPFLMSNFDLNYYSNL 235 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~-~-adgVmigRa~l~~P~i~~~~~~~~~~~~ 235 (311)
.++++ ++++|+.++++++ ++|||+||||+|++|+.++++ . ||+||+||+++.|||++.++.+.+.++.
T Consensus 165 ~~~~~-------~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~ 234 (318)
T 1vhn_A 165 VQSFT-------GRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGK 234 (318)
T ss_dssp TTTTS-------SCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSC
T ss_pred cccCC-------CCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCC
Confidence 34443 3478998888887 699999999999999999998 4 9999999999999999999998877433
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHhHHHHhccCCCcHHHHHHHhCCCCCCCChHHHHHHhh
Q psy2386 236 PQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRHMLGLMKNIKGSNKFKQILSKPNLLTIDNFQFFLNTL 308 (311)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~~~~~~~g~~~~~~~r~~l~~~~~~~~~~~~~l~~~~ 308 (311)
. +++++.++++.+.+|++...+ +|+...+..+|+|+.||++|+|++++||+.|+++++.. ++.++|++++
T Consensus 235 ~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~~~~~ 305 (318)
T 1vhn_A 235 Y--SEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYTKDLKGARRFREKVMKIEEVQ-ILKEMFYNFI 305 (318)
T ss_dssp C--CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHTTTCTTHHHHHHHHTTCCCHH-HHHHHHHHHH
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhcCCChHHHHHHHHcCCCHH-HHHHHHHHHH
Confidence 2 468899999999999999888 77533689999999999999999999999999999999 9999998876
No 3
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=100.00 E-value=4.1e-33 Score=262.40 Aligned_cols=175 Identities=13% Similarity=0.101 Sum_probs=151.8
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHH---HcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQ---KWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK 120 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~---~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK 120 (311)
.+.|+++||+|+++++|+++|+.++ +.|+|+||||+|||+.+ + |..|+++|+.+.+|+++|++.+++||+||
T Consensus 125 ~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~~e~~~~il~av~~~~~~PV~vK 199 (354)
T 4ef8_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYDFDAMRQCLTAVSEVYPHSFGVK 199 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGSHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccCHHHHHHHHHHHHHhhCCCeEEE
Confidence 4689999999999999999999998 56899999999999985 3 78899999999999999999999999999
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHcC-CCEEEEe------------cCcc------ccccCCCCcCCCCCcCcHHHHHHHH
Q psy2386 121 HRIGIDDINSYDFVRDFVGTVSSAG-CRTFIVH------------ARNA------FLKKLNPKQNRKIPILKYNFVYNLK 181 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l~~~G-~~~itvh------------~Rt~------~~~G~~g~~~~~~~~~~~~~i~~i~ 181 (311)
+|++++. +++.++++.++++| +|+|+++ +|+. ..+|+||+ ..+|.+|+++++++
T Consensus 200 i~p~~d~----~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~---~i~p~a~~~i~~v~ 272 (354)
T 4ef8_A 200 MPPYFDF----AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGR---YVLPTALANINAFY 272 (354)
T ss_dssp ECCCCSH----HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGG---GGHHHHHHHHHHHH
T ss_pred ecCCCCH----HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCC---CCchHHHHHHHHHH
Confidence 9998753 24678888888998 9999863 4431 24678876 34467899999999
Q ss_pred HhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC-CcchHHhHhh
Q psy2386 182 KDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN-PFLMSNFDLN 230 (311)
Q Consensus 182 ~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~-P~i~~~~~~~ 230 (311)
+..+++|||+||||+|++|+.+++.. ||+||+||+++.| ||+++++.+.
T Consensus 273 ~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~ 323 (354)
T 4ef8_A 273 RRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSE 323 (354)
T ss_dssp HHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHH
T ss_pred HhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHH
Confidence 98767999999999999999999976 9999999999998 9999887653
No 4
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=2.8e-32 Score=253.32 Aligned_cols=213 Identities=15% Similarity=0.041 Sum_probs=174.8
Q ss_pred CHHHHHHHHHhCCCcEEEecceeccccc-CCc---------------------h---hccccC--CC--CCCeEEEecCC
Q psy2386 5 DRHCRMFHRQITRYSWLYTEMFTTQAIL-GNK---------------------K---HCLDFN--AE--EHPIAFQVGDN 55 (311)
Q Consensus 5 d~~fR~l~~~~g~~~l~~temv~a~~l~-~~~---------------------~---~~l~~~--~~--~~p~~~Ql~g~ 55 (311)
|.+|+..+.+.| .++++|+|++.+... +.. + +.+... +. +.|+++||+|+
T Consensus 25 ~~~~~~~~~~~G-~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g~ 103 (311)
T 1jub_A 25 TIEDLEELKASQ-AGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGM 103 (311)
T ss_dssp SHHHHHHHHHSS-CSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEECCS
T ss_pred CHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcCCC
Confidence 789999999999 589999999988754 211 1 111111 23 78999999999
Q ss_pred CHHHHHHHHHHHHHcCCC-EEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYD-EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d-~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~ 134 (311)
++++|.++|+.+.++|+| +||||++||+.+ .|..+..+++.+.++++++++.+++||+||++.+++. +++
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~-----g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~----~~~ 174 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVP-----GEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL----VHF 174 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSS-----SCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSH----HHH
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCC-----CcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCH----HHH
Confidence 999999999999999999 999999999972 2667778999999999999999999999999988742 246
Q ss_pred HHHHHHHHHcCCCEEEEecCcc------------------ccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCC
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNA------------------FLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGI 195 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~------------------~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI 195 (311)
.++++.++++|+|+|++|+++. ..+|++|+. ..+..|+.++++++.++ ++|||++|||
T Consensus 175 ~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~---~~~~~~~~i~~v~~~~~~~ipvi~~GGI 251 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAY---IKPTALANVRAFYTRLKPEIQIIGTGGI 251 (311)
T ss_dssp HHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGG---GHHHHHHHHHHHHTTSCTTSEEEEESSC
T ss_pred HHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccccc---ccHHHHHHHHHHHHhcCCCCCEEEECCC
Confidence 7889999999999999998851 123444431 12346899999999874 6999999999
Q ss_pred CCHHHHHHHHhh-cCEEEEehhhhh-CCcchHHhHhh
Q psy2386 196 KTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLN 230 (311)
Q Consensus 196 ~s~~da~~~l~~-adgVmigRa~l~-~P~i~~~~~~~ 230 (311)
+|++|+.+++.. ||+||+||+++. +||+++++.+.
T Consensus 252 ~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~ 288 (311)
T 1jub_A 252 ETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKE 288 (311)
T ss_dssp CSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHH
Confidence 999999999976 999999999996 99999887653
No 5
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.98 E-value=2e-31 Score=250.48 Aligned_cols=222 Identities=13% Similarity=0.157 Sum_probs=175.9
Q ss_pred CCHHHHHHHH--HhCCCcEEEecceecc--ccc--CC----c------hhcc--ccCCCCCCeEEEecCC----------
Q psy2386 4 TDRHCRMFHR--QITRYSWLYTEMFTTQ--AIL--GN----K------KHCL--DFNAEEHPIAFQVGDN---------- 55 (311)
Q Consensus 4 td~~fR~l~~--~~g~~~l~~temv~a~--~l~--~~----~------~~~l--~~~~~~~p~~~Ql~g~---------- 55 (311)
|+..++.+.+ +.| .+|++|||++.. +.. +. + .+.+ ..+..+.++++||+..
T Consensus 38 ~~~~~~~y~~rA~gG-~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~ 116 (338)
T 1z41_A 38 TPFHMAHYISRAIGQ-VGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDI 116 (338)
T ss_dssp CHHHHHHHHHHHHTT-CSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCC
T ss_pred CHHHHHHHHHHHcCC-CCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCC
Confidence 4445444332 246 599999999764 332 11 1 1122 1367788999999853
Q ss_pred -------------CH------------HHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHH
Q psy2386 56 -------------EP------------KKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLL 101 (311)
Q Consensus 56 -------------~~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~ 101 (311)
.| ++|++||+++.++|||+||||++| |..|.+++.||++|++++++
T Consensus 117 ~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~ 196 (338)
T 1z41_A 117 FAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRF 196 (338)
T ss_dssp EESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHH
T ss_pred cCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHH
Confidence 34 789999999999999999999997 99999999999999999999
Q ss_pred HHHHHHHHhccccceeEEEEeccCC--CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHH
Q psy2386 102 VSDCIKAMRDSVEIDITVKHRIGID--DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYN 179 (311)
Q Consensus 102 ~~~iv~~v~~~~~~pvsvKiR~g~~--~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~ 179 (311)
+.+|+++|+++++.||+||++.... ...+.++..++++.+++.|+|+|++|+++...+.+ ...+..+++++++
T Consensus 197 ~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~-----~~~~~~~~~~~~~ 271 (338)
T 1z41_A 197 LREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADI-----NVFPGYQVSFAEK 271 (338)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCC-----CCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCC-----CCCccchHHHHHH
Confidence 9999999999999999999998311 11224467899999999999999999986421110 0112247899999
Q ss_pred HHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 180 LKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 180 i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
+++.+ ++||++||||.|++++.++++. ||+|++||+++.||++++++.+.+.
T Consensus 272 ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~ 325 (338)
T 1z41_A 272 IREQA-DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLN 325 (338)
T ss_dssp HHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCC
Confidence 99998 8999999999999999999975 9999999999999999999987653
No 6
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.97 E-value=2.1e-31 Score=253.40 Aligned_cols=214 Identities=14% Similarity=0.171 Sum_probs=176.8
Q ss_pred CCHHHHHHHHHhCCCcEEEecceecc--ccc--CC----c------hhcc--ccCCCCCCeEEEecC-------------
Q psy2386 4 TDRHCRMFHRQITRYSWLYTEMFTTQ--AIL--GN----K------KHCL--DFNAEEHPIAFQVGD------------- 54 (311)
Q Consensus 4 td~~fR~l~~~~g~~~l~~temv~a~--~l~--~~----~------~~~l--~~~~~~~p~~~Ql~g------------- 54 (311)
||.++|.++++.| .+|++||++++. +.. +. + .+.+ ..|..+.++++||+.
T Consensus 42 t~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~ 120 (377)
T 2r14_A 42 GRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDG 120 (377)
T ss_dssp CHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGG
T ss_pred CHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHHHHhhcCCeEEEEccCCccccccccccCC
Confidence 8999999999988 699999999875 332 11 1 1222 136778899999985
Q ss_pred ------------------------------CCH------------HHHHHHHHHHHHcCCCEEEeccCC---------Cc
Q psy2386 55 ------------------------------NEP------------KKLAKSAKIIQKWGYDEINLNCGC---------PS 83 (311)
Q Consensus 55 ------------------------------~~~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~ 83 (311)
..| ++|++||+++.++|||+||||++| |.
T Consensus 121 ~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~ 200 (377)
T 2r14_A 121 QQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATG 200 (377)
T ss_dssp CCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTT
T ss_pred CcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCc
Confidence 134 799999999999999999999997 99
Q ss_pred cccccCcccCcccCChHHHHHHHHHHhccccc-eeEEEEeccC-C----CCCcHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy2386 84 NRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIGI-D----DINSYDFVRDFVGTVSSAGCRTFIVHARNAF 157 (311)
Q Consensus 84 ~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~-pvsvKiR~g~-~----~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~ 157 (311)
.|.+++.||++|+++++++.||+++||++++. ||+||++... . ...+.++..++++.++++|+|+|++|+|+.
T Consensus 201 ~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~- 279 (377)
T 2r14_A 201 TNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDW- 279 (377)
T ss_dssp TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--
T ss_pred cccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcc-
Confidence 99999999999999999999999999999853 9999999852 1 223345678999999999999999999863
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.+... . .+|++++++++.+ ++|||+|||| +++++.++++. ||+||+||+++.|||+++++.+
T Consensus 280 ~~~~~-------~-~~~~~~~~ik~~~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 280 IGGDI-------T-YPEGFREQMRQRF-KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp ------------C-CCTTHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred cCCCC-------c-chHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHhCchHHHHHHc
Confidence 11111 1 2578899999998 8999999999 69999999975 9999999999999999999875
No 7
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.97 E-value=9.5e-32 Score=252.43 Aligned_cols=173 Identities=12% Similarity=0.146 Sum_probs=146.4
Q ss_pred CCCCCeEEEecCCCHHHHHHHHHHHHHcCCC-EEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 43 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYD-EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d-~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
..+.|+++||+|+++++|+++|+.++++|++ +||||+|||+.+ | |..|+++|+.+.+|+++|++.+++||+||+
T Consensus 126 ~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G-~~~l~~~~e~l~~il~av~~~~~~PV~vKi 200 (345)
T 3oix_A 126 PDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G-XPQIAYDFETTDQILSEVFTYFTKPLGIKL 200 (345)
T ss_dssp TTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T-CCCGGGCHHHHHHHHHHHTTTCCSCEEEEE
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C-chhhcCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence 4578999999999999999999999999987 999999999985 2 688999999999999999999999999999
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEE-------------EecCccc------cccCCCCcCCCCCcCcHHHHHHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFI-------------VHARNAF------LKKLNPKQNRKIPILKYNFVYNLKK 182 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~it-------------vh~Rt~~------~~G~~g~~~~~~~~~~~~~i~~i~~ 182 (311)
|.+.+ ..++++.++++|++.|+ +|.|+.. .+|+||+ ...+..|++++++++
T Consensus 201 ~p~~~-------~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~---ai~p~a~~~v~~i~~ 270 (345)
T 3oix_A 201 PPYFD-------IVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGD---YVKPTALANVHAFYK 270 (345)
T ss_dssp CCCCC-------HHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEG---GGHHHHHHHHHHHHT
T ss_pred CCCCC-------HHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCc---cccHHHHHHHHHHHH
Confidence 98732 35777777877776553 5655432 4567775 223445899999999
Q ss_pred hCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehh-hhhCCcchHHhHhh
Q psy2386 183 DFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE-AYKNPFLMSNFDLN 230 (311)
Q Consensus 183 ~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa-~l~~P~i~~~~~~~ 230 (311)
.++ ++|||++|||.|++|+.+++.. ||+|||||+ ++.+||++.++.+.
T Consensus 271 ~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~ 321 (345)
T 3oix_A 271 RLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKE 321 (345)
T ss_dssp TSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHH
T ss_pred HcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHH
Confidence 985 6999999999999999999976 999999999 89999999887653
No 8
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.97 E-value=3.5e-31 Score=246.23 Aligned_cols=213 Identities=11% Similarity=0.053 Sum_probs=173.9
Q ss_pred CHHHHHHHHHhCCCcEEEecceeccccc-C-------------------C--chh---cccc--CCCCCCeEEEecCCCH
Q psy2386 5 DRHCRMFHRQITRYSWLYTEMFTTQAIL-G-------------------N--KKH---CLDF--NAEEHPIAFQVGDNEP 57 (311)
Q Consensus 5 d~~fR~l~~~~g~~~l~~temv~a~~l~-~-------------------~--~~~---~l~~--~~~~~p~~~Ql~g~~~ 57 (311)
|..++..+.+.| .+++.|+|++.+... + + .+. .+.. ...+.|+++||+|.++
T Consensus 27 ~~~~~~~~~~~G-~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~g~~~ 105 (314)
T 2e6f_A 27 TEEDLRCMTASS-SGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSISGLSV 105 (314)
T ss_dssp SHHHHHHHHHSS-CSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEECCSSH
T ss_pred CHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeCCCCH
Confidence 678888899999 589999999987632 1 0 111 1211 2247899999999999
Q ss_pred HHHHHHHHHHHHcCCC---EEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHH
Q psy2386 58 KKLAKSAKIIQKWGYD---EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d---~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~ 134 (311)
+++.++|+.+.++|+| +||||++||+.+ .|..+..+++.+.++++++++.+++||+||++.+++. +++
T Consensus 106 ~~~~~~a~~~~~~g~d~~~~iein~~~P~~~-----g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~----~~~ 176 (314)
T 2e6f_A 106 EENVAMVRRLAPVAQEKGVLLELNLSCPNVP-----GKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDI----AHF 176 (314)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECCCCCST-----TCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCCCH----HHH
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEcCCCCCC-----CchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCCCH----HHH
Confidence 9999999999999999 999999999972 2567778999999999999999999999999988742 356
Q ss_pred HHHHHHHHHcC-CCEEEEecCcc------------------ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC
Q psy2386 135 RDFVGTVSSAG-CRTFIVHARNA------------------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 195 (311)
Q Consensus 135 ~e~~~~l~~~G-~~~itvh~Rt~------------------~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI 195 (311)
.++++.++++| +|+|++|+++. ..+|++|+ ...+..|+.++++++.++++|||++|||
T Consensus 177 ~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~---~~~p~~~~~i~~v~~~~~~ipvi~~GGI 253 (314)
T 2e6f_A 177 DTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGK---YILPTALANVNAFYRRCPDKLVFGCGGV 253 (314)
T ss_dssp HHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESG---GGHHHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcc---cccHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 78899999999 99999999872 01234432 1123468999999998767999999999
Q ss_pred CCHHHHHHHHhh-cCEEEEehhhhh-CCcchHHhHhh
Q psy2386 196 KTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLN 230 (311)
Q Consensus 196 ~s~~da~~~l~~-adgVmigRa~l~-~P~i~~~~~~~ 230 (311)
+|++|+.+++.. ||+||+||+++. +||+++++.+.
T Consensus 254 ~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~ 290 (314)
T 2e6f_A 254 YSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDE 290 (314)
T ss_dssp CSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHH
Confidence 999999999976 999999999996 99999888753
No 9
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.97 E-value=7.3e-31 Score=248.80 Aligned_cols=213 Identities=17% Similarity=0.218 Sum_probs=178.1
Q ss_pred CCHHHHHHHHHhCCCcEEEecceecc--ccc--CC----c------hhcc--ccCCCCCCeEEEecC-------------
Q psy2386 4 TDRHCRMFHRQITRYSWLYTEMFTTQ--AIL--GN----K------KHCL--DFNAEEHPIAFQVGD------------- 54 (311)
Q Consensus 4 td~~fR~l~~~~g~~~l~~temv~a~--~l~--~~----~------~~~l--~~~~~~~p~~~Ql~g------------- 54 (311)
||.++|.++++.| .+|++|||++.. +.. +. + .+.+ ..|..+.++++||+.
T Consensus 38 t~~~~~~y~~rAg-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g 116 (364)
T 1vyr_A 38 TPLMGEYYRQRAS-AGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGG 116 (364)
T ss_dssp CHHHHHHHHHTTT-SSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGG
T ss_pred CHHHHHHHHHHhc-CCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeccCCcccCcccccCC
Confidence 8999999999888 599999999865 332 11 1 1222 136778899999972
Q ss_pred -----------------------------CCH------------HHHHHHHHHHHHcCCCEEEeccCC---------Ccc
Q psy2386 55 -----------------------------NEP------------KKLAKSAKIIQKWGYDEINLNCGC---------PSN 84 (311)
Q Consensus 55 -----------------------------~~~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~~ 84 (311)
..| ++|++||+++.++|||+||||++| |..
T Consensus 117 ~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~ 196 (364)
T 1vyr_A 117 QAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSS 196 (364)
T ss_dssp CCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTT
T ss_pred CccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcc
Confidence 234 799999999999999999999997 999
Q ss_pred ccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEecc--CCC----CCcHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy2386 85 RVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIG--IDD----INSYDFVRDFVGTVSSAGCRTFIVHARNAF 157 (311)
Q Consensus 85 ~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g--~~~----~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~ 157 (311)
|.+.+.||++++++++++.||+++||++++ .||+||++.+ |.. ..+.++..++++.++++|+|+|++|+|+.
T Consensus 197 N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~- 275 (364)
T 1vyr_A 197 NQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDL- 275 (364)
T ss_dssp CCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBT-
T ss_pred cccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcc-
Confidence 999999999999999999999999999984 3999999986 332 22445678899999999999999999863
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.++ ++..|++++++++.+ ++||++|||| |++++.++++. ||+||+||+++.|||+++++.+
T Consensus 276 ~~~---------~~~~~~~~~~v~~~~-~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 276 AGG---------KPYSEAFRQKVRERF-HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp TBC---------CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred cCC---------CcccHHHHHHHHHHC-CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhChhHHHHHHc
Confidence 111 123688999999998 8999999999 99999999975 9999999999999999999875
No 10
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.97 E-value=9.1e-31 Score=248.22 Aligned_cols=214 Identities=14% Similarity=0.132 Sum_probs=177.6
Q ss_pred CCCHHHHHHHHHhCCCcEEEecceecc--ccc--CC----c------hhcc--ccCCCCCCeEEEecC------------
Q psy2386 3 LTDRHCRMFHRQITRYSWLYTEMFTTQ--AIL--GN----K------KHCL--DFNAEEHPIAFQVGD------------ 54 (311)
Q Consensus 3 ~td~~fR~l~~~~g~~~l~~temv~a~--~l~--~~----~------~~~l--~~~~~~~p~~~Ql~g------------ 54 (311)
.||.++|.++++.+ .+|++|||++.. +.. +. + .+.+ ..|..+.++++||+.
T Consensus 37 ~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~g 115 (365)
T 2gou_A 37 ANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTEAVHAKGCAIFAQLWHVGRVTHPDNIDG 115 (365)
T ss_dssp CCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHHHHHHSCEEEEEEECCTTSSCGGGTTT
T ss_pred CCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCeEEEEeecCCCcccccccCC
Confidence 37899999998888 699999999865 332 11 1 1222 136677899999973
Q ss_pred ------------------------------CCH------------HHHHHHHHHHHHcCCCEEEeccCC---------Cc
Q psy2386 55 ------------------------------NEP------------KKLAKSAKIIQKWGYDEINLNCGC---------PS 83 (311)
Q Consensus 55 ------------------------------~~~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~ 83 (311)
..| ++|++||+++.++|||+||||++| |.
T Consensus 116 ~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~ 195 (365)
T 2gou_A 116 QQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSE 195 (365)
T ss_dssp CCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGG
T ss_pred CCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCC
Confidence 234 799999999999999999999998 99
Q ss_pred cccccCcccCcccCChHHHHHHHHHHhccccc-eeEEEEec-cCC----CCCcHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy2386 84 NRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRI-GID----DINSYDFVRDFVGTVSSAGCRTFIVHARNAF 157 (311)
Q Consensus 84 ~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~-pvsvKiR~-g~~----~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~ 157 (311)
.|.+.+.||++|+++++++.||+++||++++. ||+||++. +|. ...+.++..++++.++++|+|+|++|+++.
T Consensus 196 ~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~- 274 (365)
T 2gou_A 196 ANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW- 274 (365)
T ss_dssp GCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT-
T ss_pred ccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc-
Confidence 99999999999999999999999999999843 99999998 332 223455678999999999999999999862
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.+ . +...|++++++++.+ ++|||+|||| |++++.++++. ||+||+||+++.|||+++++.+
T Consensus 275 -~~---~-----~~~~~~~~~~i~~~~-~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 275 -DD---A-----PDTPVSFKRALREAY-QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp -TB---C-----CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred -CC---C-----CCccHHHHHHHHHHC-CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHhCchHHHHHHc
Confidence 21 1 113578899999998 7999999999 99999999975 9999999999999999999875
No 11
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.97 E-value=4.4e-31 Score=251.27 Aligned_cols=209 Identities=15% Similarity=0.138 Sum_probs=169.2
Q ss_pred HHHHHHHhCCCcEEEecceeccc--cc--C-----Cc-----hhcc--ccCCCCCCeEEEecC-----------------
Q psy2386 8 CRMFHRQITRYSWLYTEMFTTQA--IL--G-----NK-----KHCL--DFNAEEHPIAFQVGD----------------- 54 (311)
Q Consensus 8 fR~l~~~~g~~~l~~temv~a~~--l~--~-----~~-----~~~l--~~~~~~~p~~~Ql~g----------------- 54 (311)
||+.|+ | .+|++||++++.. .. + +. .+.+ ..|..+.++++||+.
T Consensus 54 y~~rA~--g-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~ 130 (376)
T 1icp_A 54 YSQRST--N-GGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPI 130 (376)
T ss_dssp HHHTCC--T-TCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCE
T ss_pred HHHhcC--C-eeEEEECceeeccccccCcccCccCCHHHHHHHHHHHHHHHhcCCeEEEEeecCCCCcCcccccCCCcee
Confidence 677666 6 5899999998753 22 1 11 1222 236778899999986
Q ss_pred ---------------------CCH------------HHHHHHHHHHHHcCCCEEEeccCC---------CccccccCccc
Q psy2386 55 ---------------------NEP------------KKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFG 92 (311)
Q Consensus 55 ---------------------~~~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G 92 (311)
..| ++|++||+++.++|||+||||+|| |..|.+.+.||
T Consensus 131 apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG 210 (376)
T 1icp_A 131 SCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYG 210 (376)
T ss_dssp ESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS
T ss_pred cCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccC
Confidence 134 699999999999999999999997 99999999999
Q ss_pred CcccCChHHHHHHHHHHhccccc-eeEEEEecc-C----CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcC
Q psy2386 93 AILMTKPLLVSDCIKAMRDSVEI-DITVKHRIG-I----DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQN 166 (311)
Q Consensus 93 ~~Ll~~~~~~~~iv~~v~~~~~~-pvsvKiR~g-~----~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~ 166 (311)
++++++++++.+|+++||++++. ||+||++.. | +...+.++..++++.|+++|+++|++|+|+.. +.. +
T Consensus 211 GslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~-~~~--~-- 285 (376)
T 1icp_A 211 GSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMK-TAW--E-- 285 (376)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCC-C-------
T ss_pred ccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCccc-CCC--C--
Confidence 99999999999999999999853 999999975 2 22334456789999999999999999998631 111 0
Q ss_pred CCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 167 RKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 167 ~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
...+|++++++++.+ ++||++|||| |++++.++++. ||+||+||+++.|||+++++.+
T Consensus 286 ---~~~~~~~~~~vr~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 286 ---KIECTESLVPMRKAY-KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFISNPDLPKRFEL 345 (376)
T ss_dssp ------CCCCSHHHHHHC-CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred ---ccccHHHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHhCccHHHHHHc
Confidence 113567788999998 7999999999 99999999975 9999999999999999999875
No 12
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.97 E-value=7e-31 Score=248.68 Aligned_cols=172 Identities=15% Similarity=0.163 Sum_probs=147.1
Q ss_pred CCCeEEEecCC-----CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc-------
Q psy2386 45 EHPIAFQVGDN-----EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS------- 112 (311)
Q Consensus 45 ~~p~~~Ql~g~-----~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~------- 112 (311)
+.|+++||+|+ ++++|+++++.+.+. +|+||||+|||+.+ |..++++++.+.+++++++++
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~-ad~ielNisCPn~~------G~~~l~~~~~l~~ll~av~~~~~~~~~~ 218 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPL-ADYLVVNVSSPNTA------GLRSLQGKAELRRLLTKVLQERDGLRRV 218 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHTSCGG
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhh-CCEEEEECCCCCCC------CccccCCHHHHHHHHHHHHHHHhhcccc
Confidence 57999999996 799999999999875 79999999999985 445789999999999999764
Q ss_pred ccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc------------ccccCCCCcCCCCCcCcHHHHHHH
Q psy2386 113 VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA------------FLKKLNPKQNRKIPILKYNFVYNL 180 (311)
Q Consensus 113 ~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~------------~~~G~~g~~~~~~~~~~~~~i~~i 180 (311)
+++||+||+|.+++++ ++.++++.++++|+|+|++|+++. +.+|+||+ ...+..|+.++++
T Consensus 219 ~~~Pv~vKi~p~~~~~----~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~---~i~p~a~~~v~~i 291 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQ----DKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGK---PLRDLSTQTIREM 291 (367)
T ss_dssp GCCEEEEEECSCCCHH----HHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEG---GGHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCHH----HHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCc---ccchhHHHHHHHH
Confidence 6899999999987642 478999999999999999998873 13466665 2234467999999
Q ss_pred HHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhh-hhCCcchHHhHhh
Q psy2386 181 KKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREA-YKNPFLMSNFDLN 230 (311)
Q Consensus 181 ~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~-l~~P~i~~~~~~~ 230 (311)
++.++ ++|||++|||.|++|+.++++. ||+||+||++ +.+||++.++.+.
T Consensus 292 ~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~ 344 (367)
T 3zwt_A 292 YALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRE 344 (367)
T ss_dssp HHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHH
T ss_pred HHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHH
Confidence 99985 6999999999999999999986 9999999999 5789999888754
No 13
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.97 E-value=1.7e-30 Score=248.94 Aligned_cols=216 Identities=15% Similarity=0.098 Sum_probs=171.2
Q ss_pred HHHHHHHhCCCcEEEecceecc--ccc--CC----c------hhcc--ccCCCCCCeEEEecC-----------------
Q psy2386 8 CRMFHRQITRYSWLYTEMFTTQ--AIL--GN----K------KHCL--DFNAEEHPIAFQVGD----------------- 54 (311)
Q Consensus 8 fR~l~~~~g~~~l~~temv~a~--~l~--~~----~------~~~l--~~~~~~~p~~~Ql~g----------------- 54 (311)
||..|+ | .+|++||++++. +.. +. . .+.+ ..+..+.++++||+.
T Consensus 56 y~~rA~--G-~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~ 132 (402)
T 2hsa_B 56 YEQRAT--A-GGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPI 132 (402)
T ss_dssp HHHHCC--T-TCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCE
T ss_pred HHHHhc--c-CCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeccCCcccccccccCCCccc
Confidence 566665 6 689999999875 322 11 1 1122 236778899999982
Q ss_pred -----------------------CCH------------HHHHHHHHHHHHcCCCEEEeccCC---------CccccccCc
Q psy2386 55 -----------------------NEP------------KKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGF 90 (311)
Q Consensus 55 -----------------------~~~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~ 90 (311)
..| ++|++||+++.++|||+||||+|| |..|.+++.
T Consensus 133 apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~ 212 (402)
T 2hsa_B 133 SSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDE 212 (402)
T ss_dssp ESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCST
T ss_pred cCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCc
Confidence 234 799999999999999999999997 999999999
Q ss_pred ccCcccCChHHHHHHHHHHhcccc-ceeEEEEecc-C----CCCCcHHHHHHHHHHHHHcC------CCEEEEecCcccc
Q psy2386 91 FGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIG-I----DDINSYDFVRDFVGTVSSAG------CRTFIVHARNAFL 158 (311)
Q Consensus 91 ~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g-~----~~~~~~~~~~e~~~~l~~~G------~~~itvh~Rt~~~ 158 (311)
||++|+++++++.||+++||++++ .||+||++.+ | +...+.++..++++.|+++| +++|++|+++..
T Consensus 213 yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~- 291 (402)
T 2hsa_B 213 YGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYV- 291 (402)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCC-
T ss_pred cCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccc-
Confidence 999999999999999999999985 5999999986 2 12233456789999999999 999999998631
Q ss_pred ccCCCCc-CCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 159 KKLNPKQ-NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 159 ~G~~g~~-~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.+..+. ....+..+|++++++++.+ ++|||+|||| |++++.++++. ||+||+||+++.|||+++++.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~vk~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 292 AYGQTEAGRLGSEEEEARLMRTLRNAY-QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp TTTTSSSTTTTHHHHHHHHHHHHHHHC-SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred cccCCccccccCCcchHHHHHHHHHHC-CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 1111110 0000113688899999998 8999999999 99999999975 9999999999999999999875
No 14
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.97 E-value=6.6e-30 Score=239.90 Aligned_cols=208 Identities=13% Similarity=0.133 Sum_probs=165.2
Q ss_pred HHHHHHHhCCCcEEEecceeccccc-CCc-----------------------hhc---cccCCCCCCeEEEecCCC----
Q psy2386 8 CRMFHRQITRYSWLYTEMFTTQAIL-GNK-----------------------KHC---LDFNAEEHPIAFQVGDNE---- 56 (311)
Q Consensus 8 fR~l~~~~g~~~l~~temv~a~~l~-~~~-----------------------~~~---l~~~~~~~p~~~Ql~g~~---- 56 (311)
|+..+.+.| .+++.|++++.+... +.. ..+ +.....+.|+++||++++
T Consensus 70 ~~~~~a~~G-~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i 148 (336)
T 1f76_A 70 CIDALGAMG-FGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPV 148 (336)
T ss_dssp CHHHHHHTT-CSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCG
T ss_pred HHHHHHHcC-ccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcc
Confidence 777788899 589999999876432 100 111 111223569999999998
Q ss_pred ---HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---------cceeEEEEecc
Q psy2386 57 ---PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---------EIDITVKHRIG 124 (311)
Q Consensus 57 ---~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---------~~pvsvKiR~g 124 (311)
+++|+++++++.+ |+|+||||++||+.+ |...+++++++.++++++++.+ ++||+||++.+
T Consensus 149 ~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~ 221 (336)
T 1f76_A 149 EQGKDDYLICMEKIYA-YAGYIAINISSPNTP------GLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD 221 (336)
T ss_dssp GGTHHHHHHHHHHHGG-GCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC
T ss_pred cccHHHHHHHHHHHhc-cCCEEEEEccCCCCC------CcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC
Confidence 9999999999877 899999999999865 3456788999999999999988 89999999987
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc------------cccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEE
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF------------LKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIII 191 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~------------~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~ 191 (311)
++. +++.++++.++++|+|+|++|+++.. .+|++|+. ..+..++.++++++.++ ++|||+
T Consensus 222 ~~~----~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~---~~~~~~~~i~~i~~~~~~~ipVi~ 294 (336)
T 1f76_A 222 LSE----EELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRP---LQLKSTEIIRRLSLELNGRLPIIG 294 (336)
T ss_dssp CCH----HHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGG---GHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCH----HHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCch---hHHHHHHHHHHHHHHhCCCCCEEE
Confidence 653 24689999999999999999987631 12233321 11234688999998864 699999
Q ss_pred ecCCCCHHHHHHHHhh-cCEEEEehhhhh-CCcchHHhHhh
Q psy2386 192 NGGIKTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDLN 230 (311)
Q Consensus 192 nGgI~s~~da~~~l~~-adgVmigRa~l~-~P~i~~~~~~~ 230 (311)
+|||+|++|+.++++. ||+||+||+++. |||+++++.+.
T Consensus 295 ~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 295 VGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHHhh
Confidence 9999999999999987 999999999987 99999998764
No 15
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.96 E-value=2.2e-28 Score=229.82 Aligned_cols=223 Identities=13% Similarity=0.154 Sum_probs=172.6
Q ss_pred CCHHHHHHHH-HhCCCcEEEecceeccc--cc--CC----ch-------hccc-cCCCCCCeEEEecC------------
Q psy2386 4 TDRHCRMFHR-QITRYSWLYTEMFTTQA--IL--GN----KK-------HCLD-FNAEEHPIAFQVGD------------ 54 (311)
Q Consensus 4 td~~fR~l~~-~~g~~~l~~temv~a~~--l~--~~----~~-------~~l~-~~~~~~p~~~Ql~g------------ 54 (311)
|+.....+.+ .-|..+|++||.+.... .. +. +. ++.+ .|..+..+++||+-
T Consensus 38 ~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~ 117 (340)
T 3gr7_A 38 RTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEII 117 (340)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCSSSCCE
T ss_pred CHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhCCCeEEEEeccCCCccCCCCCcc
Confidence 5555555552 22446899999876543 21 11 11 1111 25667889999851
Q ss_pred -----------CC------------HHHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHH
Q psy2386 55 -----------NE------------PKKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLV 102 (311)
Q Consensus 55 -----------~~------------~~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~ 102 (311)
.. .++|++||++++++|||+||||++| |..|.+.+.||++++++++++
T Consensus 118 ~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~ 197 (340)
T 3gr7_A 118 APSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFL 197 (340)
T ss_dssp ESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHH
T ss_pred CCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHH
Confidence 01 3689999999999999999999995 999999999999999999999
Q ss_pred HHHHHHHhccccceeEEEEeccCC--CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHH
Q psy2386 103 SDCIKAMRDSVEIDITVKHRIGID--DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNL 180 (311)
Q Consensus 103 ~~iv~~v~~~~~~pvsvKiR~g~~--~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i 180 (311)
.||+++|+++++.||+||++.... ...+.++..++++.++++|+|+|++|.+...... ....+..++++++++
T Consensus 198 ~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~-----~~~~~~~~~~~~~~i 272 (340)
T 3gr7_A 198 GEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPAR-----MNVYPGYQVPFAELI 272 (340)
T ss_dssp HHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCC-----CCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCC-----CCCCccccHHHHHHH
Confidence 999999999999999999997421 1122346789999999999999999954211110 011223578999999
Q ss_pred HHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 181 KKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 181 ~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
++.+ ++||++||||.|++++.++++. ||+||+||+++.||++++++.+.+-
T Consensus 273 k~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 273 RREA-DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp HHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 9998 8999999999999999999975 9999999999999999999988653
No 16
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.96 E-value=6.3e-29 Score=237.11 Aligned_cols=172 Identities=13% Similarity=0.153 Sum_probs=140.4
Q ss_pred CCCeEEEecCCC-----HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc------
Q psy2386 45 EHPIAFQVGDNE-----PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV------ 113 (311)
Q Consensus 45 ~~p~~~Ql~g~~-----~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~------ 113 (311)
..|+++||+++. +++|.++++.+.++ +|.||||++||+++ |..++++++.+.+|+++|++..
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~ 253 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKN 253 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC------CcccccCHHHHHHHHHHHHHHHHhhccc
Confidence 457999999998 89999999999987 89999999999984 7889999999999999998862
Q ss_pred --------------cce-eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc----------cccCCCCcCCC
Q psy2386 114 --------------EID-ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF----------LKKLNPKQNRK 168 (311)
Q Consensus 114 --------------~~p-vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~----------~~G~~g~~~~~ 168 (311)
++| |+||++.++++. ++.++++.++++|+|+|++|+++.. .+|+||+.
T Consensus 254 ~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~----~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a--- 326 (415)
T 3i65_A 254 NIMNDEFLWFNTTKKKPLVFVKLAPDLNQE----QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAK--- 326 (415)
T ss_dssp CCSCHHHHCCSSSSSCCEEEEEECSCCCHH----HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGG---
T ss_pred ccccccccccccCCCCCeEEEEecCCCCHH----HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCcc---
Confidence 689 999999988652 4689999999999999999998742 24566541
Q ss_pred CCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC-CcchHHhHhh
Q psy2386 169 IPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN-PFLMSNFDLN 230 (311)
Q Consensus 169 ~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~-P~i~~~~~~~ 230 (311)
..+..+++|+++++.+. ++|||++|||.|++|+.+++.. ||+|||||+++.+ ||++.++.+.
T Consensus 327 ~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~ 391 (415)
T 3i65_A 327 LKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRE 391 (415)
T ss_dssp GHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHH
Confidence 11234589999999874 5999999999999999999987 9999999999776 9999887654
No 17
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.96 E-value=2.4e-28 Score=235.81 Aligned_cols=172 Identities=12% Similarity=0.121 Sum_probs=145.4
Q ss_pred CCCeEEEecCCC-----HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc-------
Q psy2386 45 EHPIAFQVGDNE-----PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS------- 112 (311)
Q Consensus 45 ~~p~~~Ql~g~~-----~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~------- 112 (311)
..|+++||+|++ +++|+++++.+.+ ++|+||||++||+++ |..++++++.+.+|+++|+++
T Consensus 179 ~~~vgvni~~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~v~~~~~~~~~~ 251 (443)
T 1tv5_A 179 KHIVGVSIGKNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKN 251 (443)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHHHC--
T ss_pred CceEEEEecCcccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCc------ccccccCHHHHHHHHHHHHHHHhhhccc
Confidence 468999999998 9999999999987 699999999999974 788899999999999999864
Q ss_pred -------------------------------------------ccce-eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCE
Q psy2386 113 -------------------------------------------VEID-ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRT 148 (311)
Q Consensus 113 -------------------------------------------~~~p-vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~ 148 (311)
.++| |+||++.+++++ ++.++++.++++|+|+
T Consensus 252 ~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~e----d~~~iA~~~~~aGaDg 327 (443)
T 1tv5_A 252 NIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQE----QKKEIADVLLETNIDG 327 (443)
T ss_dssp ------------------------------------CCCCSSSSSCCEEEEEECSCCCHH----HHHHHHHHHHHTTCSE
T ss_pred CccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHH----HHHHHHHHHHHcCCCE
Confidence 3678 999999987642 4689999999999999
Q ss_pred EEEecCccc----------cccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehh
Q psy2386 149 FIVHARNAF----------LKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 216 (311)
Q Consensus 149 itvh~Rt~~----------~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa 216 (311)
|++|+++.. .+|+||+. ..+..+++++++++.++ ++|||++|||.|++|+.+++.. ||+||+||+
T Consensus 328 I~v~ntt~~~~d~~~~~~~~GGlSG~~---~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 328 MIISNTTTQINDIKSFENKKGGVSGAK---LKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp EEECCCBSCCCCCGGGTTCCSEEEEHH---HHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHH
T ss_pred EEEECCCcccccccccccccCCcCCCc---chHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 999998742 23455431 11234788999999874 6999999999999999999987 999999999
Q ss_pred hhh-CCcchHHhHhh
Q psy2386 217 AYK-NPFLMSNFDLN 230 (311)
Q Consensus 217 ~l~-~P~i~~~~~~~ 230 (311)
++. +||++.++.+.
T Consensus 405 ll~~gP~l~~~i~~~ 419 (443)
T 1tv5_A 405 LVFNGMKSAVQIKRE 419 (443)
T ss_dssp HHHHGGGHHHHHHHH
T ss_pred HHhcChHHHHHHHHH
Confidence 775 99999888753
No 18
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1e-27 Score=243.83 Aligned_cols=213 Identities=15% Similarity=0.177 Sum_probs=170.1
Q ss_pred hCCCcEEEecceecc--ccc--CC----c------hhcc--ccCCCCCCeEEEecCC----------------------C
Q psy2386 15 ITRYSWLYTEMFTTQ--AIL--GN----K------KHCL--DFNAEEHPIAFQVGDN----------------------E 56 (311)
Q Consensus 15 ~g~~~l~~temv~a~--~l~--~~----~------~~~l--~~~~~~~p~~~Ql~g~----------------------~ 56 (311)
.| .+|++|||++.. +.. +. + .+.+ ..|..+.++++||+.. .
T Consensus 49 gg-~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~ 127 (671)
T 1ps9_A 49 HG-VALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFV 127 (671)
T ss_dssp TT-CSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSC
T ss_pred CC-CCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCC
Confidence 35 599999999865 332 11 1 1111 1367788999999973 4
Q ss_pred H------------HHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHHHHHHHHHhccc--
Q psy2386 57 P------------KKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-- 113 (311)
Q Consensus 57 ~------------~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-- 113 (311)
| ++|++||+++.++|||+||||+|| |..|.+++.||++++++++++.||+++||+++
T Consensus 128 p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~ 207 (671)
T 1ps9_A 128 PHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGN 207 (671)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCS
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCC
Confidence 4 789999999999999999999997 99999999999999999999999999999998
Q ss_pred cceeEEEEeccCC--CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCc-CcHHHHHHHHHhCCCCeEE
Q psy2386 114 EIDITVKHRIGID--DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPI-LKYNFVYNLKKDFPELEII 190 (311)
Q Consensus 114 ~~pvsvKiR~g~~--~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~-~~~~~i~~i~~~~~~ipvi 190 (311)
++||+||++.... ...+.++..++++.++++|+|+|++|+++. ....+....+.++ ..+++++++++.+ ++||+
T Consensus 208 ~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi 284 (671)
T 1ps9_A 208 DFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWH--EARIPTIATPVPRGAFSWVTRKLKGHV-SLPLV 284 (671)
T ss_dssp SSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBT--TCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEE
T ss_pred CceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCcc--ccccccccccCCcchHHHHHHHHHHhc-CceEE
Confidence 7899999997321 122345678999999999999999998753 1111111112232 3468899999998 89999
Q ss_pred EecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 191 INGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 191 ~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+||||.|++++.++++. ||+||+||+++.||++++++.+..
T Consensus 285 ~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~ 327 (671)
T 1ps9_A 285 TTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGR 327 (671)
T ss_dssp ECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTC
T ss_pred EeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCC
Confidence 99999999999999975 999999999999999999988654
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=1.7e-27 Score=244.49 Aligned_cols=215 Identities=12% Similarity=0.081 Sum_probs=169.5
Q ss_pred HHHHHHHhCCCcEEEecceecc--ccc--CC------c-----hhcc--ccCCCCCCeEEEecCC---------------
Q psy2386 8 CRMFHRQITRYSWLYTEMFTTQ--AIL--GN------K-----KHCL--DFNAEEHPIAFQVGDN--------------- 55 (311)
Q Consensus 8 fR~l~~~~g~~~l~~temv~a~--~l~--~~------~-----~~~l--~~~~~~~p~~~Ql~g~--------------- 55 (311)
|+..+ +.| .++++||+++.+ +.. .. . .+.+ ..|..+.++++||++.
T Consensus 45 y~~ra-~gG-~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ 122 (729)
T 1o94_A 45 RSVKA-EGG-WAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRG 122 (729)
T ss_dssp HHHHH-HTT-CSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEE
T ss_pred HHHHh-cCC-CCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhCCCeEEEEecCCCccccccccCCCCcC
Confidence 34444 345 599999999875 221 11 1 1111 2367789999999982
Q ss_pred ------------C------------HHHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHH
Q psy2386 56 ------------E------------PKKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLV 102 (311)
Q Consensus 56 ------------~------------~~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~ 102 (311)
. .++|++||+++.++|||+||||++| |..|.+++.||++++++++++
T Consensus 123 ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~ 202 (729)
T 1o94_A 123 PSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFW 202 (729)
T ss_dssp SSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHH
T ss_pred CCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHH
Confidence 1 3799999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhccc--cceeEEEEec-------cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc-cccCCCCcCCCCCc-
Q psy2386 103 SDCIKAMRDSV--EIDITVKHRI-------GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPI- 171 (311)
Q Consensus 103 ~~iv~~v~~~~--~~pvsvKiR~-------g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~-~~G~~g~~~~~~~~- 171 (311)
.||+++||+++ +.||+||++. ||+. .++..++++.+++ |+|++.+|.++.. +.+... ...+.++
T Consensus 203 ~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~---~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~-~~~~~~~~ 277 (729)
T 1o94_A 203 LETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA---EVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAG-PSRFYQQG 277 (729)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT---TTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSC-CTTTCCTT
T ss_pred HHHHHHHHHHhCCCceEEEEEccccCcCCCCCCc---hHHHHHHHHHHHh-hcCEEEEeeecccccccccC-CccccCcc
Confidence 99999999999 7999999986 3331 1246789999887 7999999987520 111111 1112222
Q ss_pred CcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 172 LKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 172 ~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
.+|++++++++.+ ++|||+||+|.|++++.++++. ||+||+||+++.|||+++++.+.
T Consensus 278 ~~~~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g 337 (729)
T 1o94_A 278 HTIPWVKLVKQVS-KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQG 337 (729)
T ss_dssp TTHHHHHHHHTTC-SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTT
T ss_pred ccHHHHHHHHHHC-CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHcC
Confidence 3689999999998 8999999999999999999976 99999999999999999998764
No 20
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=2.4e-27 Score=241.95 Aligned_cols=218 Identities=11% Similarity=0.062 Sum_probs=165.7
Q ss_pred HHHHHHHhCCCcEEEecceeccccc-C---Cc-----h-------hcc-ccCCCCCCeEEEecC-----------CC---
Q psy2386 8 CRMFHRQITRYSWLYTEMFTTQAIL-G---NK-----K-------HCL-DFNAEEHPIAFQVGD-----------NE--- 56 (311)
Q Consensus 8 fR~l~~~~g~~~l~~temv~a~~l~-~---~~-----~-------~~l-~~~~~~~p~~~Ql~g-----------~~--- 56 (311)
|+....+.| .+|++||+++....- . .. . ++. ..|..+.++++||+. ..
T Consensus 49 ~~~~~a~gG-~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ 127 (690)
T 3k30_A 49 MRKIKAEGG-WSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLG 127 (690)
T ss_dssp HHHHHHHTT-CSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEE
T ss_pred HHHHHhccC-CEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhcCCEEEEEccCCcccccccccCCCccC
Confidence 555555666 589999999865432 1 00 0 111 125678899999993 11
Q ss_pred ---------------------------HHHHHHHHHHHHHcCCCEEEeccCC----------CccccccCcccCcccCCh
Q psy2386 57 ---------------------------PKKLAKSAKIIQKWGYDEINLNCGC----------PSNRVQNGFFGAILMTKP 99 (311)
Q Consensus 57 ---------------------------~~~~~~aa~~~~~~g~d~IdiN~gC----------P~~~v~~~~~G~~Ll~~~ 99 (311)
.++|++||+++.++|||+||||++| |..|.+++.||+++++++
T Consensus 128 ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~ 207 (690)
T 3k30_A 128 PGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRM 207 (690)
T ss_dssp SSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHT
T ss_pred CCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHH
Confidence 3899999999999999999998875 458889999999999999
Q ss_pred HHHHHHHHHHhcccc--ceeEEEEeccCC--CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHH
Q psy2386 100 LLVSDCIKAMRDSVE--IDITVKHRIGID--DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN 175 (311)
Q Consensus 100 ~~~~~iv~~v~~~~~--~pvsvKiR~g~~--~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~ 175 (311)
+++.||+++|+++++ .||.+|+..... ...+.++..++++.+++ |+|++++|+++. ..... +...+.+...++
T Consensus 208 r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~-~~~~~-~~~~~~~~~~~~ 284 (690)
T 3k30_A 208 RLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSW-EGDSV-TSRFAPEGRQEE 284 (690)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCH-HHHTC-CTTTCCTTTTHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccc-cccCC-CCccCCccccHH
Confidence 999999999999994 566666643211 11223567899999988 899999998752 11111 111112234578
Q ss_pred HHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 176 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 176 ~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
+++++++.+ ++|||+||||+|++++.++++. ||+||+||+++.|||+++++++.
T Consensus 285 ~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g 340 (690)
T 3k30_A 285 FVAGLKKLT-TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDG 340 (690)
T ss_dssp HHTTSGGGC-SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTT
T ss_pred HHHHHHHHc-CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcC
Confidence 899999998 8999999999999999999976 99999999999999999999864
No 21
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.95 E-value=4.1e-27 Score=221.06 Aligned_cols=164 Identities=18% Similarity=0.226 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEec---------cCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEecc-
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLN---------CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG- 124 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN---------~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g- 124 (311)
.++|++||+++.++|||+|||| ++||..|.+++.||++++++++++.||+++||+++ ++||+||++..
T Consensus 142 i~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~ 221 (343)
T 3kru_A 142 VKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD 221 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred HHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh
Confidence 3789999999999999999999 67999999999999999999999999999999999 68999999983
Q ss_pred CCC-CCcHHHHHHHHHHHHHcCCCEEEE-ecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 125 IDD-INSYDFVRDFVGTVSSAGCRTFIV-HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 125 ~~~-~~~~~~~~e~~~~l~~~G~~~itv-h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
|.+ ..+.++..++++.|+++ +|+|++ ||++.. +. ....+..+|++++++++.+ ++||++||+|.|++++.
T Consensus 222 ~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~-~~-----~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae 293 (343)
T 3kru_A 222 YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLN-VD-----INLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAE 293 (343)
T ss_dssp SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSC-CC-----CCCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHH
T ss_pred hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEe-ee-----ecccCceeehHHHHHHHhc-CcccceeeeeeHHHHHH
Confidence 322 23356788999999999 999999 576531 10 0011235789999999998 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
++++. ||+||+||+++.||+++.++.
T Consensus 294 ~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 294 EILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp HHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred HHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 99975 999999999999999999987
No 22
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.95 E-value=5.6e-27 Score=221.06 Aligned_cols=170 Identities=17% Similarity=0.177 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccC
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGI 125 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~ 125 (311)
.++|++||+++.++|||+||||++| |..|.+++.||++++++++++.||+++||+++ +.||+||++...
T Consensus 151 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~ 230 (349)
T 3hgj_A 151 LQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc
Confidence 3689999999999999999999999 99999999999999999999999999999999 789999999731
Q ss_pred C--CCCcHHHHHHHHHHHHHcCCCEEEEe-cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 126 D--DINSYDFVRDFVGTVSSAGCRTFIVH-ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 126 ~--~~~~~~~~~e~~~~l~~~G~~~itvh-~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
. ...+.++..++++.|++.|+|+|++| +++..... ....+..++++++++++.+ ++||+++|+|.|++++.
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~-----~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~ 304 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVR-----IPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAE 304 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSC-----CCCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccc-----cCCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHH
Confidence 1 11224467899999999999999999 44321000 0011235789999999998 89999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
++++. ||+|++||+++.||+++.++.+.+-
T Consensus 305 ~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 305 TLLQAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp HHHHTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred HHHHCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 99975 9999999999999999999988753
No 23
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.95 E-value=3e-27 Score=227.37 Aligned_cols=171 Identities=10% Similarity=0.123 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcc-cCChHHHHHHHHHHhccc------cceeEEEE
Q psy2386 58 KKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSV------EIDITVKH 121 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~L-l~~~~~~~~iv~~v~~~~------~~pvsvKi 121 (311)
++|++||+++.++|||+||||+|| |..|.+++.||+++ +++++++.||+++|++++ ++||+||+
T Consensus 170 ~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRi 249 (419)
T 3l5a_A 170 QQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRA 249 (419)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEec
Confidence 689999999999999999999998 99999999999999 999999999999999987 67999999
Q ss_pred eccCC-C---CCcHHHHHHHHHHHHH-cCCCEEEEecCccccccCCCCcCCCCCc-CcHHHHHHHHHhCC-CCeEEEecC
Q psy2386 122 RIGID-D---INSYDFVRDFVGTVSS-AGCRTFIVHARNAFLKKLNPKQNRKIPI-LKYNFVYNLKKDFP-ELEIIINGG 194 (311)
Q Consensus 122 R~g~~-~---~~~~~~~~e~~~~l~~-~G~~~itvh~Rt~~~~G~~g~~~~~~~~-~~~~~i~~i~~~~~-~ipvi~nGg 194 (311)
+.... + ..+.+++.++++.|++ +|+|+|+||+++.....+... ..++ .++++++++++.++ ++|||+|||
T Consensus 250 s~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~---~~g~~~~~~~a~~Ik~~v~~~iPVI~~Gg 326 (419)
T 3l5a_A 250 TPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSR---TPGDHFGRPVNQIVYEHLAGRIPLIASGG 326 (419)
T ss_dssp CSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCC---CSSTTTTSBHHHHHHHHHTTSSCEEECSS
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccC---CCCccccHHHHHHHHHHcCCCCeEEEECC
Confidence 87211 0 1124568899999999 999999999986411111110 1112 35778889998764 599999999
Q ss_pred CCCHHHHHHHHhhcCEEEEehhhhhCCcchHHhHhhh
Q psy2386 195 IKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 195 I~s~~da~~~l~~adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
|.|++++.++++.||+|++||+++.||++++++.+..
T Consensus 327 I~t~e~Ae~~L~~aDlVaiGR~~IanPdlv~ki~~G~ 363 (419)
T 3l5a_A 327 INSPESALDALQHADMVGMSSPFVTEPDFVHKLAEQR 363 (419)
T ss_dssp CCSHHHHHHHGGGCSEEEESTHHHHCTTHHHHHHTTC
T ss_pred CCCHHHHHHHHHhCCcHHHHHHHHHCcHHHHHHHcCC
Confidence 9999999999977999999999999999999998653
No 24
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=4.6e-27 Score=249.11 Aligned_cols=170 Identities=14% Similarity=0.221 Sum_probs=143.1
Q ss_pred CCCeEEEe-cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 45 EHPIAFQV-GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql-~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
+.|+++|+ +|++++++.++++++++.|+|+|+||+|||+. ...+++|++++++++++.++++++++.+++||+||++.
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~ 712 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP 712 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 57899988 68999999999999999999999999999998 66778999999999999999999999999999999997
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEE----------------------ecCccccccCCCCcCCCCCcCc----HHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIV----------------------HARNAFLKKLNPKQNRKIPILK----YNFV 177 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itv----------------------h~Rt~~~~G~~g~~~~~~~~~~----~~~i 177 (311)
+.++ +.++++.++++|+|+|++ |+|+. .+|++|+ +. ++.+
T Consensus 713 ~~~~------~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~-~gg~sg~-------~~~~~~~~~v 778 (1025)
T 1gte_A 713 NVTD------IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTT-YGGVSGT-------AIRPIALRAV 778 (1025)
T ss_dssp CSSC------HHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBC-CEEEESG-------GGHHHHHHHH
T ss_pred ChHH------HHHHHHHHHHcCCCEEEEecccccccccccccccccccccccccc-CCCCCcc-------cchhHHHHHH
Confidence 5442 578999999999999999 55543 4555544 44 4789
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh-CCcchHHhHh
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK-NPFLMSNFDL 229 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~-~P~i~~~~~~ 229 (311)
+++++.++++|||++|||+|++|+.+++.. ||+|||||+++. +|.++.++.+
T Consensus 779 ~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~ 832 (1025)
T 1gte_A 779 TTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCT 832 (1025)
T ss_dssp HHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHH
T ss_pred HHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHH
Confidence 999998867999999999999999999986 999999999998 5556666553
No 25
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.95 E-value=7.3e-27 Score=216.34 Aligned_cols=172 Identities=19% Similarity=0.303 Sum_probs=143.7
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
+.|+++||+|++++++.++++.+.+ .|+|+||||++||+.+.. |..+..+++++.++++++++.+++||.||++.
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g----~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~ 173 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG----GQAFGTDPEVAAALVKACKAVSKVPLYVKLSP 173 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT----TEEGGGCHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc----hhhhcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 7899999999999999999999998 899999999999996422 56667899999999999999989999999998
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEE---------ecCccc------cccCCCCcCCCCCcCcHHHHHHHHHhCCCCe
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIV---------HARNAF------LKKLNPKQNRKIPILKYNFVYNLKKDFPELE 188 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itv---------h~Rt~~------~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ip 188 (311)
++++ ..++++.++++|+|+|++ |.|+.. .+|++|+. ..+..+++++++++.+ ++|
T Consensus 174 ~~~~------~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~---~~~~~~~~i~~i~~~~-~ip 243 (311)
T 1ep3_A 174 NVTD------IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPA---IKPVALKLIHQVAQDV-DIP 243 (311)
T ss_dssp CSSC------SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGG---GHHHHHHHHHHHHTTC-SSC
T ss_pred ChHH------HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCcc---chHHHHHHHHHHHHhc-CCC
Confidence 7743 357899999999999999 444321 12344331 0011358899999987 899
Q ss_pred EEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhh
Q psy2386 189 IIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 189 vi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~ 230 (311)
||++|||.|++|+.++++. ||+||+||+++.+|+++.++.+.
T Consensus 244 via~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~ 286 (311)
T 1ep3_A 244 IIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIIDK 286 (311)
T ss_dssp EEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHHH
Confidence 9999999999999999976 99999999999999999887643
No 26
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.94 E-value=8.9e-27 Score=220.00 Aligned_cols=156 Identities=17% Similarity=0.184 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHHHHHHHHHhccccc-eeEEEEeccC-
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIGI- 125 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~-pvsvKiR~g~- 125 (311)
.++|++||+++.++|||+||||++| |..|.+++.||++++++++++.||+++||++++. ||+||++...
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~ 239 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD 239 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc
Confidence 3689999999999999999999999 9999999999999999999999999999999843 9999999731
Q ss_pred ----CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 126 ----DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 126 ----~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
...+..++..++++.|+++|+|+|++|+++. | . ++++++++.+ ++|||+|||| |++++
T Consensus 240 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~---~---~----------~~~~~ik~~~-~iPvi~~Ggi-t~e~a 301 (361)
T 3gka_A 240 AHTMGDSDPAATFGHVARELGRRRIAFLFARESFG---G---D----------AIGQQLKAAF-GGPFIVNENF-TLDSA 301 (361)
T ss_dssp SSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---T---T----------CCHHHHHHHH-CSCEEEESSC-CHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC---C---H----------HHHHHHHHHc-CCCEEEeCCC-CHHHH
Confidence 1222345678999999999999999998861 1 1 3478888888 7999999999 99999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
.++++. ||+||+||+++.|||+++++.+.
T Consensus 302 ~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g 332 (361)
T 3gka_A 302 QAALDAGQADAVAWGKLFIANPDLPRRFKLN 332 (361)
T ss_dssp HHHHHTTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred HHHHHcCCccEEEECHHhHhCcHHHHHHHhC
Confidence 999975 99999999999999999999864
No 27
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.94 E-value=1.1e-26 Score=219.41 Aligned_cols=155 Identities=17% Similarity=0.195 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHHHHHHHHHhccccc-eeEEEEeccCC-
Q psy2386 58 KKLAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI-DITVKHRIGID- 126 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~-pvsvKiR~g~~- 126 (311)
++|++||+++.++|||+||||++| |..|.+.+.||++++++++++.||+++||++++. ||+||++....
T Consensus 153 ~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~ 232 (362)
T 4ab4_A 153 EAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA 232 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc
Confidence 689999999999999999999999 9999999999999999999999999999999843 99999997421
Q ss_pred ----CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 127 ----DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 127 ----~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
..+..++..++++.|+++|+|+|++|+++. | . ++++++++.+ ++|||+|||| |++++.
T Consensus 233 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~---~---~----------~~~~~ik~~~-~iPvi~~Ggi-t~e~a~ 294 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELGKRGIAFICSREREA---D---D----------SIGPLIKEAF-GGPYIVNERF-DKASAN 294 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC---T---T----------CCHHHHHHHH-CSCEEEESSC-CHHHHH
T ss_pred cccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC---C---H----------HHHHHHHHHC-CCCEEEeCCC-CHHHHH
Confidence 112244678999999999999999998861 1 1 2478888888 7999999999 999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
++++. ||+||+||+++.|||++.++.+.
T Consensus 295 ~~l~~g~aD~V~iGR~~lanPdl~~k~~~g 324 (362)
T 4ab4_A 295 AALASGKADAVAFGVPFIANPDLPARLAAD 324 (362)
T ss_dssp HHHHTTSCSEEEESHHHHHCTTHHHHHHTT
T ss_pred HHHHcCCccEEEECHHhHhCcHHHHHHHcC
Confidence 99975 99999999999999999998863
No 28
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.94 E-value=6.5e-26 Score=214.85 Aligned_cols=168 Identities=13% Similarity=0.181 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHcCCCEEEeccC---------CCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCC
Q psy2386 58 KKLAKSAKIIQKWGYDEINLNCG---------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGID 126 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~IdiN~g---------CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~ 126 (311)
++|++||+++.++|||+||||++ ||..|.+++.||++|.++++++.||+++||+++ ++||.||++....
T Consensus 158 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~ 237 (363)
T 3l5l_A 158 QDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEY 237 (363)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhc
Confidence 68999999999999999999998 699999999999999999999999999999998 5899999997421
Q ss_pred C--C-CcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCC-CCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 127 D--I-NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNR-KIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 127 ~--~-~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~-~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
. . .+.++..++++.|+++|+|+|++|+++.. .. ... ..+..++++++++++.+ ++||+++|||.|++++.
T Consensus 238 ~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~-~~----~~~~~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~ 311 (363)
T 3l5l_A 238 DGRDEQTLEESIELARRFKAGGLDLLSVSVGFTI-PD----TNIPWGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAE 311 (363)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCS-SC----CCCCCCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccc-cc----cccCCCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHH
Confidence 1 1 23457789999999999999999976421 10 000 11224789999999998 89999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
++++. ||+|++||+++.||+++.++.+.+
T Consensus 312 ~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l 342 (363)
T 3l5l_A 312 AALQANQLDLVSVGRAHLADPHWAYFAAKEL 342 (363)
T ss_dssp HHHHTTSCSEEECCHHHHHCTTHHHHHHHHT
T ss_pred HHHHCCCccEEEecHHHHhCchHHHHHHHHc
Confidence 99975 999999999999999999998765
No 29
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.92 E-value=1e-24 Score=207.46 Aligned_cols=161 Identities=17% Similarity=0.153 Sum_probs=137.5
Q ss_pred CHHHHHHHHHHHH-HcCCCEEEeccCC---------Cccccc-cCcccC-cccCChHHHHHHHHHHhcccc-ceeEEEEe
Q psy2386 56 EPKKLAKSAKIIQ-KWGYDEINLNCGC---------PSNRVQ-NGFFGA-ILMTKPLLVSDCIKAMRDSVE-IDITVKHR 122 (311)
Q Consensus 56 ~~~~~~~aa~~~~-~~g~d~IdiN~gC---------P~~~v~-~~~~G~-~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR 122 (311)
.+++|++||+++. ++|||+||||++| |..|.+ ++.||+ +++++++++.||+++||++++ .||.||++
T Consensus 172 ~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis 251 (379)
T 3aty_A 172 IIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRIS 251 (379)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 3567889999999 9999999999996 999998 999999 999999999999999999985 48999999
Q ss_pred cc-C----CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCC
Q psy2386 123 IG-I----DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT 197 (311)
Q Consensus 123 ~g-~----~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s 197 (311)
.. + ....+.++..++++.|++.|+++|++|+++. .. . . ...+ ++++++.+ ++|||+||+| |
T Consensus 252 ~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~~---~---~---~~~~-~~~ir~~~-~iPvi~~G~i-t 317 (379)
T 3aty_A 252 PLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDM--VN---Q---Q---IGDV-VAWVRGSY-SGVKISNLRY-D 317 (379)
T ss_dssp TTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCT--TS---C---C---CCCH-HHHHHTTC-CSCEEEESSC-C
T ss_pred cccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCc--CC---C---C---ccHH-HHHHHHHC-CCcEEEECCC-C
Confidence 73 2 1233455678999999999999999998752 11 0 0 1126 88999998 7999999999 9
Q ss_pred HHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 198 KKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 198 ~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
++++.++++. ||+||+||+++.||++++++.+.
T Consensus 318 ~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g 352 (379)
T 3aty_A 318 FEEADQQIREGKVDAVAFGAKFIANPDLVERAQQN 352 (379)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcC
Confidence 9999999975 99999999999999999998753
No 30
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.91 E-value=1.3e-24 Score=207.45 Aligned_cols=164 Identities=15% Similarity=0.069 Sum_probs=133.7
Q ss_pred HH-HHHHHHHHHHcCCCEEEeccCC---------CccccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEeccCC
Q psy2386 58 KK-LAKSAKIIQKWGYDEINLNCGC---------PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGID 126 (311)
Q Consensus 58 ~~-~~~aa~~~~~~g~d~IdiN~gC---------P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g~~ 126 (311)
++ |++||+++.++|||+||||++| |..|.+.+.||++++++++++.||+++|+++++ .||+||++. |+
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~-~~ 245 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISP-WA 245 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TC
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECc-cc
Confidence 56 9999999999999999999999 999999999999999999999999999999985 489999986 32
Q ss_pred C------C-C---cHHHHHHHHHHH---HHcC--CCEEEEe-cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE
Q psy2386 127 D------I-N---SYDFVRDFVGTV---SSAG--CRTFIVH-ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII 190 (311)
Q Consensus 127 ~------~-~---~~~~~~e~~~~l---~~~G--~~~itvh-~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi 190 (311)
. . + ..+...++++.| ++.| +++|+|| +|+.. ....+ +...|+.+..+++.+ ++|||
T Consensus 246 ~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~-~~~~~------~~~~~~~~~~ir~~~-~~PvI 317 (407)
T 3tjl_A 246 TFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSG-NVDVS------EEDQAGDNEFVSKIW-KGVIL 317 (407)
T ss_dssp CGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEET-TEECC------GGGCCCCSHHHHHHC-CSEEE
T ss_pred ccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCC-CCcCC------ccchhHHHHHHHHHh-CCCEE
Confidence 1 1 2 244578899999 8889 9999999 66531 11110 011234567788887 79999
Q ss_pred EecCCCCHHHHHHHHh----h-cCEEEEehhhhhCCcchHHhHhh
Q psy2386 191 INGGIKTKKEIDLHLN----Y-IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 191 ~nGgI~s~~da~~~l~----~-adgVmigRa~l~~P~i~~~~~~~ 230 (311)
+||||.+.+|+.++++ . ||+||+||+++.|||++.++.+.
T Consensus 318 ~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g 362 (407)
T 3tjl_A 318 KAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDG 362 (407)
T ss_dssp EESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHT
T ss_pred ecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHHHcC
Confidence 9999999998766664 4 99999999999999999999764
No 31
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.90 E-value=3.1e-23 Score=196.60 Aligned_cols=229 Identities=12% Similarity=0.081 Sum_probs=172.2
Q ss_pred CHHHHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEeccCCCc
Q psy2386 5 DRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPS 83 (311)
Q Consensus 5 d~~fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~IdiN~gCP~ 83 (311)
+.+|++.|+++| ..+++|+|.+ .++. .... ...+.|+.+||++ +|++...+++++++++|++.|+||++||.
T Consensus 99 e~~la~aa~~~G-~~~~~s~~~s-~~le----~v~~-~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~ 171 (368)
T 2nli_A 99 EAGTARAVSEFG-TIMSISAYSG-ATFE----EISE-GLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTV 171 (368)
T ss_dssp HHHHHHHHHHHT-CCEEECTTCS-SCHH----HHHH-HHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC-
T ss_pred HHHHHHHHHHcC-CCEEeechHh-HHHH----HHHH-hCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCc
Confidence 479999999999 4899999986 3431 1111 2236899999998 89999999999999999999999999998
Q ss_pred c------------------ccc----cCcccCcc---c--CChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHH
Q psy2386 84 N------------------RVQ----NGFFGAIL---M--TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRD 136 (311)
Q Consensus 84 ~------------------~v~----~~~~G~~L---l--~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e 136 (311)
. +.. ..+.|+.+ + .|+++..++++++++.+++||.||.- . ..+
T Consensus 172 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v---~-------~~e 241 (368)
T 2nli_A 172 SGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGI---Q-------HPE 241 (368)
T ss_dssp --CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEE---C-------SHH
T ss_pred ccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcC---C-------CHH
Confidence 2 111 03456665 3 37888889999999999999999942 1 146
Q ss_pred HHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 137 FVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 137 ~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmig 214 (311)
.++.++++|+|+|+|+++.. . +.+.++..|+.+.++++.++ ++|||++|||+|++|+.+++.. ||+||||
T Consensus 242 ~a~~a~~~Gad~I~vs~~gg-r-------~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 242 DADMAIKRGASGIWVSNHGA-R-------QLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHHTTCSEEEECCGGG-T-------SCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEcCCCc-C-------CCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 78999999999999965432 1 11234578999999998774 5999999999999999999987 9999999
Q ss_pred hhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHhH
Q psy2386 215 REAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRHM 273 (311)
Q Consensus 215 Ra~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~~ 273 (311)
|++ ++..... + .....+.++.+.++++..+. .|. ..+..+++..
T Consensus 314 r~~-----l~~~~~~---G------~~gv~~~l~~l~~el~~~m~~~G~-~~i~~l~~~~ 358 (368)
T 2nli_A 314 RPV-----LFGLALG---G------WQGAYSVLDYFQKDLTRVMQLTGS-QNVEDLKGLD 358 (368)
T ss_dssp HHH-----HHHHHHH---H------HHHHHHHHHHHHHHHHHHHHHHTC-SSHHHHHTCC
T ss_pred HHH-----HHHHHhc---C------hHHHHHHHHHHHHHHHHHHHHhCC-cCHHHhcccc
Confidence 955 4443321 1 12345778888888888777 775 4677777654
No 32
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.89 E-value=5.9e-23 Score=193.97 Aligned_cols=175 Identities=13% Similarity=0.091 Sum_probs=129.3
Q ss_pred CCCCCeEEEecCCCHHHHHHHHHHHHHc---CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEE
Q psy2386 43 AEEHPIAFQVGDNEPKKLAKSAKIIQKW---GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITV 119 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~~~aa~~~~~~---g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsv 119 (311)
..+.|+++||+|++++++++.++.+.+. ++|.||||++||+.+ .|..+..+++.+.++++++++.+..|+.+
T Consensus 124 ~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~~~~pv~v 198 (354)
T 3tjx_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEVYPHSFGV 198 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHHhhccccc
Confidence 4478999999999999999888877653 689999999999875 46788899999999999999999999999
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcC-CCEEEE----------ecCcc--------ccccCCCCcCCCCCcCcHHHHHHH
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAG-CRTFIV----------HARNA--------FLKKLNPKQNRKIPILKYNFVYNL 180 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G-~~~itv----------h~Rt~--------~~~G~~g~~~~~~~~~~~~~i~~i 180 (311)
|++.++++.. ....+..+.+.+ ++.++. +.++. ..+|+||+.. .+..+++++++
T Consensus 199 K~~p~~~~~~----~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~---~~~a~~~v~~~ 271 (354)
T 3tjx_A 199 KMPPYFDFAA----FDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYV---LPTALANINAF 271 (354)
T ss_dssp EECCCCSHHH----HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGG---HHHHHHHHHHH
T ss_pred ccCCCCCchh----HHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhh---HHHHHHHHHHH
Confidence 9999886532 334555555554 333331 11221 1456777622 12234667788
Q ss_pred HHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhh-hhCCcchHHhHh
Q psy2386 181 KKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREA-YKNPFLMSNFDL 229 (311)
Q Consensus 181 ~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~-l~~P~i~~~~~~ 229 (311)
++..+++|||++|||.|++|+.+++.. ||+||||||+ +.+|+++.++.+
T Consensus 272 ~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~ 322 (354)
T 3tjx_A 272 YRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTS 322 (354)
T ss_dssp HHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHH
T ss_pred HHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHH
Confidence 887778999999999999999999976 9999999996 689999988765
No 33
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.89 E-value=1e-22 Score=194.41 Aligned_cols=232 Identities=14% Similarity=0.142 Sum_probs=168.4
Q ss_pred CCCCCHH-------HHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecC-CCHHHHHHHHHHHHHcCC
Q psy2386 1 MNLTDRH-------CRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGD-NEPKKLAKSAKIIQKWGY 72 (311)
Q Consensus 1 ~~~td~~-------fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g-~~~~~~~~aa~~~~~~g~ 72 (311)
||+|+.+ +++.|+++| ..+++|+|.+ .++. +... ...+.|+.+||++ .|++...+.++++++.|+
T Consensus 102 mg~~~l~~~~~e~~laraA~~~G-~~~~~s~~~s-~~le----~v~~-~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~ 174 (392)
T 2nzl_A 102 TAMQRMAHVDGELATVRACQSLG-TGMMLSSWAT-SSIE----EVAE-AGPEALRWLQLYIYKDREVTKKLVRQAEKMGY 174 (392)
T ss_dssp CSCGGGTSTTHHHHHHHHHHHHT-CEEEECTTCS-SCHH----HHHH-HCTTSEEEEEECCBSSHHHHHHHHHHHHHTTC
T ss_pred ccccccccchHHHHHHHHHHHcC-CCeeccchHH-HHHH----HHHH-hcCCCcEEEEEEecCCHHHHHHHHHHHHHCCC
Confidence 5677776 999999999 4799999886 3331 1111 2236899999987 799999999999999999
Q ss_pred CEEEeccCCCcc---------------cc-----c------cC----cccC---cccC---ChHHHHHHHHHHhccccce
Q psy2386 73 DEINLNCGCPSN---------------RV-----Q------NG----FFGA---ILMT---KPLLVSDCIKAMRDSVEID 116 (311)
Q Consensus 73 d~IdiN~gCP~~---------------~v-----~------~~----~~G~---~Ll~---~~~~~~~iv~~v~~~~~~p 116 (311)
+.|+||++||.. ++ . +. +.|+ +++. +|++..++++++++.+++|
T Consensus 175 ~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~P 254 (392)
T 2nzl_A 175 KAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLP 254 (392)
T ss_dssp CCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSC
T ss_pred CEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCC
Confidence 999999999985 22 1 00 1233 3444 8888888999999999999
Q ss_pred eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCC
Q psy2386 117 ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGI 195 (311)
Q Consensus 117 vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI 195 (311)
|.||. +.. .+.++.++++|+|+|+|+++.. .+.+.++..|+.+.++++.+. ++|||++|||
T Consensus 255 vivKg---v~~-------~e~A~~a~~aGad~I~vs~~gg--------r~~~~g~~~~~~l~~v~~av~~~ipVia~GGI 316 (392)
T 2nzl_A 255 IVAKG---ILR-------GDDAREAVKHGLNGILVSNHGA--------RQLDGVPATIDVLPEIVEAVEGKVEVFLDGGV 316 (392)
T ss_dssp EEEEE---ECC-------HHHHHHHHHTTCCEEEECCGGG--------TSSTTCCCHHHHHHHHHHHHTTSSEEEECSSC
T ss_pred EEEEe---cCC-------HHHHHHHHHcCCCEEEeCCCCC--------CcCCCCcChHHHHHHHHHHcCCCCEEEEECCC
Confidence 99994 221 4668999999999999965532 112234578999999998763 5999999999
Q ss_pred CCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHh
Q psy2386 196 KTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRH 272 (311)
Q Consensus 196 ~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~ 272 (311)
+|.+|+.+++.. ||+|||||+++ +..... + .....+.++.+.++++..+. .|. ..+..+++.
T Consensus 317 ~~g~Dv~kalalGAd~V~iGr~~l-----~~~~~~---g------~~gv~~~l~~l~~el~~~m~~~G~-~~i~el~~~ 380 (392)
T 2nzl_A 317 RKGTDVLKALALGAKAVFVGRPIV-----WGLAFQ---G------EKGVQDVLEILKEEFRLAMALSGC-QNVKVIDKT 380 (392)
T ss_dssp CSHHHHHHHHHTTCSEEEECHHHH-----HHHHHH---H------HHHHHHHHHHHHHHHHHHHHHHTC-SBGGGCCGG
T ss_pred CCHHHHHHHHHhCCCeeEECHHHH-----HHHHhc---C------hHHHHHHHHHHHHHHHHHHHHhCC-CcHHHHhhh
Confidence 999999999987 99999999665 332211 1 12345677788888887777 664 345555443
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.88 E-value=1.2e-21 Score=184.73 Aligned_cols=232 Identities=11% Similarity=0.166 Sum_probs=159.5
Q ss_pred CHHHHHHHHHhCCCcEEEecceecccccC-C---chhccccCCCCCCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEecc
Q psy2386 5 DRHCRMFHRQITRYSWLYTEMFTTQAILG-N---KKHCLDFNAEEHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNC 79 (311)
Q Consensus 5 d~~fR~l~~~~g~~~l~~temv~a~~l~~-~---~~~~l~~~~~~~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~ 79 (311)
+.++++.|+++| ..+++++|.+. +.. . ..++++....+.|+++|+. |.+++.+.++ ++..|+|+|+||+
T Consensus 75 ~~~~a~aa~~~G-~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~~~---~~~~gad~i~i~~ 148 (349)
T 1p0k_A 75 NKSLARAASQAG-IPLAVGSQMSA--LKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEA---VEMIGANALQIHL 148 (349)
T ss_dssp HHHHHHHHHHHT-CCEECCCCTTT--TTCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHHHH---HHHTTCSEEEEEE
T ss_pred HHHHHHHHHHcC-CcEEeccchhc--ccCcccccceehhhhhCCCceeEEeecCCCCHHHHHHH---HHhcCCCeEEecc
Confidence 789999999999 47899998764 211 1 1123333445789999999 8899887654 5567999999999
Q ss_pred CCCccccccCcccCcccCChHH--HHHHHHHHhccccceeEEEEe-ccCCCCCcHHHHHHHHHHHHHcCCCEEEE--ecC
Q psy2386 80 GCPSNRVQNGFFGAILMTKPLL--VSDCIKAMRDSVEIDITVKHR-IGIDDINSYDFVRDFVGTVSSAGCRTFIV--HAR 154 (311)
Q Consensus 80 gCP~~~v~~~~~G~~Ll~~~~~--~~~iv~~v~~~~~~pvsvKiR-~g~~~~~~~~~~~e~~~~l~~~G~~~itv--h~R 154 (311)
+||+...... | ++++ +.++++++++.+++||.+|+. .+++ .+.++.+.++|+|+|++ ||+
T Consensus 149 ~~~~~~~~~~--~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~--------~~~a~~a~~~Gad~I~v~~~gg 213 (349)
T 1p0k_A 149 NVIQEIVMPE--G-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS--------KASAGKLYEAGAAAVDIGGYGG 213 (349)
T ss_dssp CTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC--------HHHHHHHHHHTCSEEEEEC---
T ss_pred cchhhhcCCC--C-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC--------HHHHHHHHHcCCCEEEEcCCCC
Confidence 9997643321 1 4443 778999999989999999984 3332 36688999999999999 777
Q ss_pred cccc-----ccCCC-CcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHh
Q psy2386 155 NAFL-----KKLNP-KQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 155 t~~~-----~G~~g-~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~ 227 (311)
|.+. ....+ ......++..++.+.++++.++++|||++|||+|++|+.+++.. ||+|||||+++..+.
T Consensus 214 t~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~----- 288 (349)
T 1p0k_A 214 TNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALT----- 288 (349)
T ss_dssp ------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH-----
T ss_pred cchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh-----
Confidence 5211 00000 00012344678899999887657999999999999999999976 999999998765431
Q ss_pred HhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHh
Q psy2386 228 DLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRH 272 (311)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~ 272 (311)
.. + +....+.++.+.+++...+. .|. ..+..++++
T Consensus 289 ~~---g------~~~~~~~~~~~~~~l~~~m~~~G~-~~i~el~~~ 324 (349)
T 1p0k_A 289 DS---G------EEGLLEEIQLILEELKLIMTVLGA-RTIADLQKA 324 (349)
T ss_dssp HH---H------HHHHHHHHHHHHHHHHHHHHHHTC-CBHHHHTTC
T ss_pred hc---C------HHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHhhC
Confidence 10 1 12245677788888887777 674 467777765
No 35
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.87 E-value=2.6e-21 Score=183.66 Aligned_cols=234 Identities=12% Similarity=0.105 Sum_probs=172.2
Q ss_pred CCCCCHH-------HHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEec-CCCHHHHHHHHHHHHHcCC
Q psy2386 1 MNLTDRH-------CRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVG-DNEPKKLAKSAKIIQKWGY 72 (311)
Q Consensus 1 ~~~td~~-------fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~-g~~~~~~~~aa~~~~~~g~ 72 (311)
||+|+++ |++.|+++|. .+++|+|.+. .+ +++....+ .|..+||+ ++|++...+.++.+++.|+
T Consensus 79 mg~~~l~~~~~e~a~a~aa~~~G~-~~~~s~~~~~-~i----eev~~~~~--~~~~~QLy~~~d~~~~~~~~~~a~~~G~ 150 (370)
T 1gox_A 79 TAMQKMAHPEGEYATARAASAAGT-IMTLSSWATS-SV----EEVASTGP--GIRFFQLYVYKDRNVVAQLVRRAERAGF 150 (370)
T ss_dssp CSCGGGTCTTHHHHHHHHHHHTTC-CEEECTTCSS-CH----HHHHTTCC--CCEEEEECCBSSHHHHHHHHHHHHHTTC
T ss_pred cchhhhccchHHHHHHHHHHHcCC-CeeccCCCCC-CH----HHHHhhcC--CCceEEEecCCCchHHHHHHHHHHHCCC
Confidence 6788887 9999999994 7999998853 12 11221122 78999996 8999999999999999999
Q ss_pred CEEEeccCCCcc---------------c-----ccc-------CcccCcc------cCChHHHHHHHHHHhccccceeEE
Q psy2386 73 DEINLNCGCPSN---------------R-----VQN-------GFFGAIL------MTKPLLVSDCIKAMRDSVEIDITV 119 (311)
Q Consensus 73 d~IdiN~gCP~~---------------~-----v~~-------~~~G~~L------l~~~~~~~~iv~~v~~~~~~pvsv 119 (311)
+.|+||++||.. + +.+ ...|+.+ +.+|.+..+.++++++.+++||.+
T Consensus 151 ~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~v 230 (370)
T 1gox_A 151 KAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILV 230 (370)
T ss_dssp CEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEE
T ss_pred CEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEE
Confidence 999999999975 1 112 2345554 557776677899999999999999
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCH
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTK 198 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~ 198 (311)
|.... .+.++.+.++|+|+|+|.+... . +.+..+.+++.+.++++.++ ++|||++|||+|.
T Consensus 231 K~~~~----------~e~a~~a~~~Gad~I~vs~~gg-r-------~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~ 292 (370)
T 1gox_A 231 KGVIT----------AEDARLAVQHGAAGIIVSNHGA-R-------QLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRG 292 (370)
T ss_dssp ECCCS----------HHHHHHHHHTTCSEEEECCGGG-T-------SSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSH
T ss_pred EecCC----------HHHHHHHHHcCCCEEEECCCCC-c-------cCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCH
Confidence 98732 3668899999999999943211 0 11223468999999999875 6999999999999
Q ss_pred HHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHhHHH
Q psy2386 199 KEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRHMLG 275 (311)
Q Consensus 199 ~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~~~~ 275 (311)
+|+.+++.. ||+|||||+++.. .... + .....+.++.+.++++..+. .|. ..+..++++...
T Consensus 293 ~D~~k~l~~GAdaV~iGr~~l~~-----~~~~---G------~~gv~~~~~~l~~el~~~m~~~G~-~~i~el~~~~l~ 356 (370)
T 1gox_A 293 TDVFKALALGAAGVFIGRPVVFS-----LAAE---G------EAGVKKVLQMMRDEFELTMALSGC-RSLKEISRSHIA 356 (370)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHH-----HHHH---H------HHHHHHHHHHHHHHHHHHHHHHTC-SBTTTCCGGGEE
T ss_pred HHHHHHHHcCCCEEeecHHHHHH-----Hhhc---c------HHHHHHHHHHHHHHHHHHHHHhCC-CCHHHhhhccee
Confidence 999999987 9999999987642 1111 1 12245678888888888777 775 467777777543
No 36
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.85 E-value=5.5e-21 Score=188.05 Aligned_cols=229 Identities=14% Similarity=0.187 Sum_probs=169.4
Q ss_pred CCHHHHHHHHH--hCCCcEEEeccee-cccccCCchhccccC-CCCCCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEec
Q psy2386 4 TDRHCRMFHRQ--ITRYSWLYTEMFT-TQAILGNKKHCLDFN-AEEHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLN 78 (311)
Q Consensus 4 td~~fR~l~~~--~g~~~l~~temv~-a~~l~~~~~~~l~~~-~~~~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN 78 (311)
++.++++.|++ +| ..+++|||.+ +... +.... +.+.|..+||+ +.|++.+.+++++++++||++|.|+
T Consensus 208 ~e~alaraA~~~~~G-~~~~~s~~a~~s~e~------v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~it 280 (511)
T 1kbi_A 208 GEKDVARGCGQGVTK-VPQMISTLASCSPEE------IIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVT 280 (511)
T ss_dssp THHHHHHHHHSSSSC-CCEEECTTCSSCHHH------HHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEE
T ss_pred HHHHHHHHHHHhCCC-eeEEeCCcccCCHHH------HHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 47899999999 99 4799999943 2221 11122 34689999998 9999999999999999999999999
Q ss_pred cCCCc----cccccC-------------------ccc-Cccc---CChHHHHHHHHHHhccccceeEEEEeccCCCCCcH
Q psy2386 79 CGCPS----NRVQNG-------------------FFG-AILM---TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSY 131 (311)
Q Consensus 79 ~gCP~----~~v~~~-------------------~~G-~~Ll---~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~ 131 (311)
+.||+ ++..+. +.| +.++ .+|++..++++++++.+++||.||. +..
T Consensus 281 vd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKg---v~~---- 353 (511)
T 1kbi_A 281 VDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKG---VQR---- 353 (511)
T ss_dssp CSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEE---ECS----
T ss_pred CCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEe---CCC----
Confidence 99997 111111 111 1233 5788888999999999999999993 222
Q ss_pred HHHHHHHHHHHHcCCCEEEE--ecCccccccCCCCcCCCCCcCcHHHHHHHHHhC------CCCeEEEecCCCCHHHHHH
Q psy2386 132 DFVRDFVGTVSSAGCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF------PELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itv--h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~------~~ipvi~nGgI~s~~da~~ 203 (311)
.+.++.++++|+|+|+| ||++.. ...+..|+.+.++++.+ .++|||++|||+|.+|+.+
T Consensus 354 ---~e~A~~a~~aGad~I~vs~hgG~~~----------d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~k 420 (511)
T 1kbi_A 354 ---TEDVIKAAEIGVSGVVLSNHGGRQL----------DFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLK 420 (511)
T ss_dssp ---HHHHHHHHHTTCSEEEECCTTTTSS----------TTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHH
T ss_pred ---HHHHHHHHHcCCCEEEEcCCCCccC----------CCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHH
Confidence 36689999999999999 444421 12235788888888775 2699999999999999999
Q ss_pred HHhh-cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHhHH
Q psy2386 204 HLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRHML 274 (311)
Q Consensus 204 ~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~~~ 274 (311)
+|.. ||+|||||+++ +..... + .....+.++.+.++++..+. .|. ..+..+++++.
T Consensus 421 aLalGAdaV~iGr~~l-----~~~~~~---G------~~gv~~~l~~l~~el~~~m~~~G~-~~i~el~~~~l 478 (511)
T 1kbi_A 421 ALCLGAKGVGLGRPFL-----YANSCY---G------RNGVEKAIEILRDEIEMSMRLLGV-TSIAELKPDLL 478 (511)
T ss_dssp HHHHTCSEEEECHHHH-----HHHHHH---H------HHHHHHHHHHHHHHHHHHHHHHTC-CBGGGCCGGGE
T ss_pred HHHcCCCEEEECHHHH-----HHHHhc---C------hHHHHHHHHHHHHHHHHHHHHhCC-CcHHHHhHHHh
Confidence 9987 99999999655 433221 1 12345677888888888777 775 46677776654
No 37
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.81 E-value=3.5e-19 Score=168.29 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHcCCCEEEeccC---------CCccccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEeccCC-
Q psy2386 58 KKLAKSAKIIQKWGYDEINLNCG---------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGID- 126 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~IdiN~g---------CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g~~- 126 (311)
++|++||++++++|||+||||++ +|..|.|+|.||+++.++.+++.||+++||++++ -+|.||+.....
T Consensus 152 ~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~ 231 (358)
T 4a3u_A 152 DDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEI 231 (358)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCccc
Confidence 67999999999999999999987 7999999999999999999999999999999984 457777764211
Q ss_pred ----CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 127 ----DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 127 ----~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
..+..+....+++.+.+.|++.+.++.... .+..+. .....+..++++.+ ..||+ .|++.|++++.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~------~~~~~~a~~ik~~~-~~~v~-~~g~~~~~~ae 301 (358)
T 4a3u_A 232 QGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAV--DGTFGK------TDQPKLSPEIRKVF-KPPLV-LNQDYTFETAQ 301 (358)
T ss_dssp TTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBT--TCSSSB------CSSCCCHHHHHHHC-CSCEE-EESSCCHHHHH
T ss_pred CCCcccchHHHHHHHHHhhhccCccccccccccc--cCcccc------cccHHHHHHHHHhc-CCcEE-EeCCCCHHHHH
Confidence 112234566788999999999999986542 111111 01123456777776 56766 56688999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
++++. ||.|.+||+++.||++.+++++.
T Consensus 302 ~~l~~G~aD~V~~gR~~ladPdlp~k~~~g 331 (358)
T 4a3u_A 302 AALDSGVADAISFGRPFIGNPDLPRRFFEK 331 (358)
T ss_dssp HHHHHTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred HHHHcCCceEeHhhHHHHhChhHHHHHHhC
Confidence 99986 99999999999999999999863
No 38
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.77 E-value=7.9e-19 Score=155.66 Aligned_cols=187 Identities=13% Similarity=0.076 Sum_probs=134.2
Q ss_pred CCCCHHHHHHHH---HhCCCcE--EEecceec-ccccCCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEE
Q psy2386 2 NLTDRHCRMFHR---QITRYSW--LYTEMFTT-QAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEI 75 (311)
Q Consensus 2 ~~td~~fR~l~~---~~g~~~l--~~temv~a-~~l~~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~I 75 (311)
..|+.+||.+|+ +||. +. ++++|++. +..+. ..++... .+.|+.+|+.++.+.. ++.+.+.|+|+|
T Consensus 16 ~~t~~~i~~l~~~a~~~g~-~~v~v~~~~v~~~~~~l~-~v~v~~v--~~~P~g~~~~~~k~~~----~~~A~~~Gad~I 87 (225)
T 1mzh_A 16 HLSEKEIEEFVLKSEELGI-YAVCVNPYHVKLASSIAK-KVKVCCV--IGFPLGLNKTSVKVKE----AVEAVRDGAQEL 87 (225)
T ss_dssp TCCHHHHHHHHHHHHHTTC-SEEEECGGGHHHHHHHCS-SSEEEEE--ESTTTCCSCHHHHHHH----HHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHHHHhCC-eEEEECHHHHHHHHHHhc-CCceeeE--ecCCCCccchhhhHHH----HHHHHHcCCCEE
Confidence 368999999998 7985 44 67888864 43332 1112111 1456666665554444 355667899999
Q ss_pred E--eccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE---eccCCCCCcHHHHHHHHHHHHHcCCCEEE
Q psy2386 76 N--LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH---RIGIDDINSYDFVRDFVGTVSSAGCRTFI 150 (311)
Q Consensus 76 d--iN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi---R~g~~~~~~~~~~~e~~~~l~~~G~~~it 150 (311)
| +|+|| .+. .+++.+.+.+++++++++ |+.+|+ +.+|+++ +..++++.++++|+|+|
T Consensus 88 d~viN~g~-----~~~-------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~----~~~~~a~~a~eaGad~I- 149 (225)
T 1mzh_A 88 DIVWNLSA-----FKS-------EKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEE----EIKKAVEICIEAGADFI- 149 (225)
T ss_dssp EEECCHHH-----HHT-------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHH----HHHHHHHHHHHHTCSEE-
T ss_pred EEEecHHH-----Hhc-------CChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHH----HHHHHHHHHHHhCCCEE-
Confidence 9 89999 111 245778888999999888 999999 7777542 46889999999999999
Q ss_pred EecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhH
Q psy2386 151 VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 151 vh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~ 228 (311)
+.+| |+ +.+.++|+.++.+++.+. ++||+++|||+|++|+.++++. ||.|.++++ .++++++.
T Consensus 150 -~tst----g~------~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~----~~i~~~~~ 214 (225)
T 1mzh_A 150 -KTST----GF------APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSG----ISIAEEFL 214 (225)
T ss_dssp -ECCC----SC------SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH----HHHHHHHH
T ss_pred -EECC----CC------CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH----HHHHHHHH
Confidence 3333 21 112368999999998762 6999999999999999999987 997777665 34666554
Q ss_pred h
Q psy2386 229 L 229 (311)
Q Consensus 229 ~ 229 (311)
+
T Consensus 215 ~ 215 (225)
T 1mzh_A 215 K 215 (225)
T ss_dssp H
T ss_pred h
Confidence 3
No 39
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.77 E-value=5e-18 Score=161.51 Aligned_cols=227 Identities=13% Similarity=0.104 Sum_probs=165.4
Q ss_pred CCHHHHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEe------
Q psy2386 4 TDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINL------ 77 (311)
Q Consensus 4 td~~fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~Idi------ 77 (311)
+|.+|++.|+++|. ..++++ +++.++. +... . .+.|..+||+-..++...+..+.+++.|++.+.|
T Consensus 90 ~~~~~a~aa~~~G~-~~~vss-~s~~~le----~i~~-~-~~~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~ 161 (380)
T 1p4c_A 90 GDLALARAATKAGI-PFVLST-ASNMSIE----DLAR-Q-CDGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAV 161 (380)
T ss_dssp HHHHHHHHHHHHTC-CEEECT-TCSSCHH----HHHH-H-CCSCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred HHHHHHHHHHHcCC-CeecCc-cccCCHH----HHHh-c-cCCCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCcc
Confidence 68899999999994 788886 4444442 1111 1 3678999998555666667777788899988764
Q ss_pred --------ccCCCcc---ccc--------c--CcccCcc---cC---ChHHHHHHHHHHhccccceeEEEEeccCCCCCc
Q psy2386 78 --------NCGCPSN---RVQ--------N--GFFGAIL---MT---KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINS 130 (311)
Q Consensus 78 --------N~gCP~~---~v~--------~--~~~G~~L---l~---~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~ 130 (311)
|+||+.+ +.. + ...++++ +. +|++..++++++++.+++||.||. +.
T Consensus 162 ~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkg---v~---- 234 (380)
T 1p4c_A 162 NGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKG---LL---- 234 (380)
T ss_dssp CCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEE---EC----
T ss_pred ccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEe---cC----
Confidence 7799644 111 0 1122322 23 788888999999999999999994 21
Q ss_pred HHHHHHHHHHHHHcCCCEEEE--ecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itv--h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~- 207 (311)
..+.++.+.++|+|.|+| ||++.. +.++.+|+.+.++++.+ ++|||++|||++.+|+.+++..
T Consensus 235 ---t~e~a~~a~~aGad~I~vs~~gg~~~----------d~~~~~~~~l~~v~~~~-~~pVia~GGI~~~~dv~kal~~G 300 (380)
T 1p4c_A 235 ---SAEDADRCIAEGADGVILSNHGGRQL----------DCAISPMEVLAQSVAKT-GKPVLIDSGFRRGSDIVKALALG 300 (380)
T ss_dssp ---CHHHHHHHHHTTCSEEEECCGGGTSC----------TTCCCGGGTHHHHHHHH-CSCEEECSSCCSHHHHHHHHHTT
T ss_pred ---cHHHHHHHHHcCCCEEEEcCCCCCcC----------CCCcCHHHHHHHHHHHc-CCeEEEECCCCCHHHHHHHHHhC
Confidence 146789999999999999 666431 12235899999999988 6899999999999999999987
Q ss_pred cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHhHH
Q psy2386 208 IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRHML 274 (311)
Q Consensus 208 adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~~~ 274 (311)
||+||+||+++... .. .+ .....+.++.+.++++..+. .|. ..+..++++..
T Consensus 301 AdaV~iGr~~l~~~-----~~---~g------~~~v~~~~~~l~~el~~~m~~~G~-~~i~el~~~~l 353 (380)
T 1p4c_A 301 AEAVLLGRATLYGL-----AA---RG------ETGVDEVLTLLKADIDRTLAQIGC-PDITSLSPDYL 353 (380)
T ss_dssp CSCEEESHHHHHHH-----HH---HH------HHHHHHHHHHHHHHHHHHHHHHTC-CBGGGCCGGGE
T ss_pred CcHhhehHHHHHHH-----Hh---cC------HHHHHHHHHHHHHHHHHHHHHhCC-CCHHHhccCeE
Confidence 99999999997531 11 11 12356778888888888888 775 56778887753
No 40
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.76 E-value=1.6e-18 Score=172.50 Aligned_cols=212 Identities=9% Similarity=0.069 Sum_probs=151.5
Q ss_pred HHHHh---CCCcEEEecceeccccc-C--CchhccccCCCCCCeEEEecCCCHHH---------HHHHHHHHHHcCCCEE
Q psy2386 11 FHRQI---TRYSWLYTEMFTTQAIL-G--NKKHCLDFNAEEHPIAFQVGDNEPKK---------LAKSAKIIQKWGYDEI 75 (311)
Q Consensus 11 l~~~~---g~~~l~~temv~a~~l~-~--~~~~~l~~~~~~~p~~~Ql~g~~~~~---------~~~aa~~~~~~g~d~I 75 (311)
+++.| |+..+.+.++..+.+.. + ...+.++.-..+.++-+|++|.-.+. +.+.|+.+.++|+|.|
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V 364 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKV 364 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEE
Confidence 45544 76689999988765432 1 11233333233456778888865432 4566777778899999
Q ss_pred EeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE----------------------------------
Q psy2386 76 NLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH---------------------------------- 121 (311)
Q Consensus 76 diN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi---------------------------------- 121 (311)
.||.+| ..+..+-..++.++.+|+++.++.+..-+. .+-|++.+
T Consensus 365 ~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~-~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~ 442 (555)
T 1jvn_A 365 SIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYGAQ-AVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCT 442 (555)
T ss_dssp EECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGG-GEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEE
T ss_pred EECCHH-hhCchhhccccccccCHHHHHHHHHHhCCC-cEEEEEEccccccccccccccccccccccCCCCCcceeEEEE
Confidence 999999 444433344566789999999999987531 12222222
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
+.||...... ...++++.+++.|++.|++|++++ .+.++ + .||+.++++++.+ ++|||+||||.|++|+
T Consensus 443 ~~Gw~~~~~~-~~~e~a~~~~~~Ga~~il~t~~~~-dG~~~-------G-~d~~li~~l~~~~-~iPVIasGGi~s~~d~ 511 (555)
T 1jvn_A 443 IKGGRESRDL-GVWELTRACEALGAGEILLNCIDK-DGSNS-------G-YDLELIEHVKDAV-KIPVIASSGAGVPEHF 511 (555)
T ss_dssp ETTTTEEEEE-EHHHHHHHHHHTTCCEEEECCGGG-TTTCS-------C-CCHHHHHHHHHHC-SSCEEECSCCCSHHHH
T ss_pred EecCccCCCC-CHHHHHHHHHHcCCCEEEEeCCCC-CCCCC-------C-CCHHHHHHHHHhC-CccEEEECCCCCHHHH
Confidence 2356543322 357899999999999999999985 12222 2 4999999999998 8999999999999999
Q ss_pred HHHHh-h-cCEEEEehhhhhCCcchHHhHhhhccCC
Q psy2386 202 DLHLN-Y-IDGVMLGREAYKNPFLMSNFDLNYYSNL 235 (311)
Q Consensus 202 ~~~l~-~-adgVmigRa~l~~P~i~~~~~~~~~~~~ 235 (311)
.++++ . ||+||+||+++.++|.+.++++.+...+
T Consensus 512 ~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~g 547 (555)
T 1jvn_A 512 EEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHG 547 (555)
T ss_dssp HHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTT
T ss_pred HHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCC
Confidence 99998 4 9999999999999999999998765543
No 41
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.76 E-value=4.8e-18 Score=158.94 Aligned_cols=227 Identities=11% Similarity=0.066 Sum_probs=151.0
Q ss_pred HHHHHHHHHhCCCcEEEecceecccccC-C---chhccccCCCCCCeE-----EEecCCCHHHHHHHHHHHHHcCCCEEE
Q psy2386 6 RHCRMFHRQITRYSWLYTEMFTTQAILG-N---KKHCLDFNAEEHPIA-----FQVGDNEPKKLAKSAKIIQKWGYDEIN 76 (311)
Q Consensus 6 ~~fR~l~~~~g~~~l~~temv~a~~l~~-~---~~~~l~~~~~~~p~~-----~Ql~g~~~~~~~~aa~~~~~~g~d~Id 76 (311)
.+|++.|+++| ..++++||.++ +.. . ..+ +.....+.|++ .|+++.+++.+.++++.+ +++++.
T Consensus 78 ~~la~~a~~~G-~~~~~~~~~~~--le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~---~~~a~~ 150 (332)
T 1vcf_A 78 LALAEAAEALG-VGMMLGSGRIL--LERPEALRSFR-VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEML---EADALA 150 (332)
T ss_dssp HHHHHHHHHHT-CEEEEEECHHH--HHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHH---TCSEEE
T ss_pred HHHHHHHHHcC-CCEEeCCchhc--ccCCCccceEE-eeccCCCceeecccChhhhhccChHHHHHHHhhc---CCCcee
Confidence 59999999999 58999999886 432 1 122 23334578886 778888999998887653 567665
Q ss_pred eccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEE--ecC
Q psy2386 77 LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV--HAR 154 (311)
Q Consensus 77 iN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itv--h~R 154 (311)
+|..++.... . .|.. +.+.+.++++++++ +++||.||. +++.. + .+.++.++++|+|+|+| ||+
T Consensus 151 i~~n~~~~~~-~--~~~~---~~~~~~~~i~~vr~-~~~Pv~vK~-v~~g~--~----~e~a~~~~~~G~d~I~vs~~gg 216 (332)
T 1vcf_A 151 FHVNPLQEAV-Q--RGDT---DFRGLVERLAELLP-LPFPVMVKE-VGHGL--S----REAALALRDLPLAAVDVAGAGG 216 (332)
T ss_dssp EECCHHHHHH-T--TSCC---CCTTHHHHHHHHCS-CSSCEEEEC-SSSCC--C----HHHHHHHTTSCCSEEECCCBTS
T ss_pred eccchHHHHh-c--CCCc---cHHHHHHHHHHHHc-CCCCEEEEe-cCCCC--C----HHHHHHHHHcCCCEEEeCCCCC
Confidence 5544332211 1 1111 12236788999999 999999994 23321 1 35688999999999999 766
Q ss_pred ccc-------cccCCC-CcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchH
Q psy2386 155 NAF-------LKKLNP-KQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMS 225 (311)
Q Consensus 155 t~~-------~~G~~g-~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~ 225 (311)
+.+ .+...+ ....+.++..++.+.++++.++++|||++|||+|++|+.+++.. ||+||+||+++..+
T Consensus 217 t~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~---- 292 (332)
T 1vcf_A 217 TSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA---- 292 (332)
T ss_dssp CCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH----
T ss_pred CcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH----
Confidence 421 100000 00022344678999999998756999999999999999999987 99999999876432
Q ss_pred HhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHH
Q psy2386 226 NFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSI 269 (311)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 269 (311)
.+ + .....+.++.+.++++..+. .|. ..+..+
T Consensus 293 ------~~-G----~~gv~~~~~~l~~el~~~m~~~G~-~~i~el 325 (332)
T 1vcf_A 293 ------LE-G----AERVAAWIGDYLEELRTALFAIGA-RNPKEA 325 (332)
T ss_dssp ------TT-C----HHHHHHHHHHHHHHHHHHHHHHTC-SSGGGG
T ss_pred ------hc-c----HHHHHHHHHHHHHHHHHHHHHhCC-CCHHHH
Confidence 01 1 12345677777777777666 553 234443
No 42
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.76 E-value=1.2e-17 Score=156.25 Aligned_cols=186 Identities=10% Similarity=0.115 Sum_probs=144.0
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCC
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGC 81 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gC 81 (311)
|+|+..++..+.+.|..+++.+++++.+.+.....+.-.. .+.|+.+|++..+|+ +.+.++.+.+.|+|+|++|+||
T Consensus 22 g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~--~~~p~gvnl~~~~~~-~~~~~~~a~~~g~d~V~~~~g~ 98 (332)
T 2z6i_A 22 WVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL--TDKPFGVNIMLLSPF-VEDIVDLVIEEGVKVVTTGAGN 98 (332)
T ss_dssp TTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH--CCSCEEEEECTTSTT-HHHHHHHHHHTTCSEEEECSSC
T ss_pred CCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh--cCCCEEEEecCCCCC-HHHHHHHHHHCCCCEEEECCCC
Confidence 6899999999999886688999998776653100011111 257999999997765 7778888889999999999999
Q ss_pred CccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccC
Q psy2386 82 PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKL 161 (311)
Q Consensus 82 P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~ 161 (311)
|. ++++.+++. ++||.+|+.. .+.++.+++.|+|+|.++|+. .+|.
T Consensus 99 p~--------------------~~i~~l~~~-g~~v~~~v~~-----------~~~a~~~~~~GaD~i~v~g~~--~GG~ 144 (332)
T 2z6i_A 99 PS--------------------KYMERFHEA-GIIVIPVVPS-----------VALAKRMEKIGADAVIAEGME--AGGH 144 (332)
T ss_dssp GG--------------------GTHHHHHHT-TCEEEEEESS-----------HHHHHHHHHTTCSCEEEECTT--SSEE
T ss_pred hH--------------------HHHHHHHHc-CCeEEEEeCC-----------HHHHHHHHHcCCCEEEEECCC--CCCC
Confidence 83 245566653 8999988721 456888999999999999874 2443
Q ss_pred CCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc--chHHhHhhh
Q psy2386 162 NPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF--LMSNFDLNY 231 (311)
Q Consensus 162 ~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~--i~~~~~~~~ 231 (311)
.| ...+|+.+.++++.+ ++||+++|||.|++++.+++.. ||+|++||+++.+|. ....+++.+
T Consensus 145 ~g------~~~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~~~~~~k~~~ 210 (332)
T 2z6i_A 145 IG------KLTTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKI 210 (332)
T ss_dssp CC------SSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCCSCHHHHHHH
T ss_pred CC------CccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccccccHHHHHHH
Confidence 33 135899999999998 8999999999999999999987 999999999999995 344444444
No 43
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.75 E-value=1.1e-17 Score=160.21 Aligned_cols=168 Identities=11% Similarity=0.075 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeccC---------CCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEecc-CC
Q psy2386 58 KKLAKSAKIIQKWGYDEINLNCG---------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG-ID 126 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~IdiN~g---------CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g-~~ 126 (311)
++|++||++++++|||+||||++ +|..|.|+|.||+++.++.+++.||+++||+++ +-||.||+... +.
T Consensus 172 ~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~ 251 (400)
T 4gbu_A 172 KEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVF 251 (400)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 57999999999999999999986 799999999999999999999999999999998 34888887642 11
Q ss_pred -------CCCcHHHHHHHHHHHHHcC-----CCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 127 -------DINSYDFVRDFVGTVSSAG-----CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 127 -------~~~~~~~~~e~~~~l~~~G-----~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
+....+...++++.++..+ .+.+.+................+.. .....+++.+ ++|||++|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ir~~~-~~pvi~~G~ 326 (400)
T 4gbu_A 252 NSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEG----GSNDFVYSIW-KGPVIRAGN 326 (400)
T ss_dssp TTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCS----CCSTHHHHHC-CSCEEEESS
T ss_pred CCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhh----HHHHHHHHHh-CCCEEEeCC
Confidence 1112334455666666543 3445443221100000000001111 1123456667 799999999
Q ss_pred CCCHHHHHHHH-hh-cCEEEEehhhhhCCcchHHhHhh
Q psy2386 195 IKTKKEIDLHL-NY-IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 195 I~s~~da~~~l-~~-adgVmigRa~l~~P~i~~~~~~~ 230 (311)
|.+.+++.+.+ +. ||.|.+||+++.||.+.+++++.
T Consensus 327 ~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G 364 (400)
T 4gbu_A 327 FALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKG 364 (400)
T ss_dssp CTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHT
T ss_pred CCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcC
Confidence 99877776655 44 99999999999999999999863
No 44
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.71 E-value=1.8e-16 Score=149.94 Aligned_cols=236 Identities=11% Similarity=0.151 Sum_probs=155.3
Q ss_pred CCCCHH------HHHHHHHhCCCcEEEecceec--ccccCCchhccc-cCCCCCCeEEEec-----C-CCHHHHHHHHHH
Q psy2386 2 NLTDRH------CRMFHRQITRYSWLYTEMFTT--QAILGNKKHCLD-FNAEEHPIAFQVG-----D-NEPKKLAKSAKI 66 (311)
Q Consensus 2 ~~td~~------fR~l~~~~g~~~l~~temv~a--~~l~~~~~~~l~-~~~~~~p~~~Ql~-----g-~~~~~~~~aa~~ 66 (311)
|.|+.+ +|..|+++| ..+.+.||..+ +.-...+.+.++ ..| +.|++.+++ + .+++.+.++++.
T Consensus 69 Ggt~~~~~in~~la~~a~~~G-~~~~vGs~~~~l~~~~~~~s~~~vr~~ap-~~~~~anlg~~ql~~~~~~~~~~~av~~ 146 (368)
T 3vkj_A 69 GGRNELGRINKIIAEVAEKFG-IPMGVGSQRVAIEKAEARESFAIVRKVAP-TIPIIANLGMPQLVKGYGLKEFQDAIQM 146 (368)
T ss_dssp CSSHHHHHHHHHHHHHHHHHT-CCEECCCCHHHHHCGGGSHHHHHHHHHCS-SSCEEEEEEGGGGGTTCCHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhC-CCeeeecchhccCCHHHHhhHHHHHHhCc-CcceecCcCeeecCCCCCHHHHHHHHHH
Confidence 667777 499999999 48999999765 332211222222 233 557765444 4 789999998887
Q ss_pred HHHcCCCEEEeccCCCccccccCcccCcccCChH-HHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcC
Q psy2386 67 IQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPL-LVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAG 145 (311)
Q Consensus 67 ~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~-~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G 145 (311)
+ ++|+..|+|| |...+... .|. .+.. ...++++++++.+++||.||. +||... .+.++.++++|
T Consensus 147 ~-~a~al~Ihln---~~~~~~~p-~g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s------~~~A~~l~~aG 211 (368)
T 3vkj_A 147 I-EADAIAVHLN---PAQEVFQP-EGE---PEYQIYALEKLRDISKELSVPIIVKE-SGNGIS------METAKLLYSYG 211 (368)
T ss_dssp T-TCSEEEEECC---HHHHHHSS-SCC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCC------HHHHHHHHHTT
T ss_pred h-cCCCeEEEec---chhhhhCC-CCC---chhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCC------HHHHHHHHhCC
Confidence 7 5677778888 33333221 111 1222 367888999999999999997 666542 46789999999
Q ss_pred CCEEEE--ecCcccc-----cc----------CCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-
Q psy2386 146 CRTFIV--HARNAFL-----KK----------LNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 207 (311)
Q Consensus 146 ~~~itv--h~Rt~~~-----~G----------~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~- 207 (311)
+|+|+| ||+|.+. .. +.+... -+......+.++++.++++|||++|||+|+.|+.+++..
T Consensus 212 ad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~--~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lG 289 (368)
T 3vkj_A 212 IKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLD--WGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALG 289 (368)
T ss_dssp CCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTT--CSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHT
T ss_pred CCEEEEeCCCCCcccchhhhhcccccccchhhcccccc--ccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcC
Confidence 999999 5554211 00 000000 011123567888888866999999999999999999987
Q ss_pred cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHHHh
Q psy2386 208 IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIRQQLN-NNKIKNINSITRH 272 (311)
Q Consensus 208 adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~k~ 272 (311)
||+||+||+++. ... .+ +....+.++.+.+.++..+. .|. ..+..+++.
T Consensus 290 A~~v~ig~~~l~-----~~~----~G------~~~v~~~l~~l~~eL~~~m~~~G~-~~i~el~~~ 339 (368)
T 3vkj_A 290 ADIAGMALPVLK-----SAI----EG------KESLEQFFRKIIFELKAAMMLTGS-KDVDALKKT 339 (368)
T ss_dssp CSEEEECHHHHH-----HHH----HC------HHHHHHHHHHHHHHHHHHHHHTTC-CBHHHHHTC
T ss_pred CCEEEEcHHHHH-----HHh----cC------hHHHHHHHHHHHHHHHHHHHHhCC-CCHHHhccC
Confidence 999999996543 221 11 12234567777777777776 664 456666653
No 45
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.9e-17 Score=149.74 Aligned_cols=157 Identities=14% Similarity=0.143 Sum_probs=118.4
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCC-----hHHHHHHHHHHh-ccccceeEE
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTK-----PLLVSDCIKAMR-DSVEIDITV 119 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~-----~~~~~~iv~~v~-~~~~~pvsv 119 (311)
.++-+|++|.-.. . ++.+++ +|+|.|- .|+++++| |+++.++++++. +.+-+++.+
T Consensus 75 ~~~pv~vgGGir~-~-~~~~~l--~Ga~~Vi--------------igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~ 136 (260)
T 2agk_A 75 SPQFLQVGGGIND-T-NCLEWL--KWASKVI--------------VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSC 136 (260)
T ss_dssp STTTSEEESSCCT-T-THHHHT--TTCSCEE--------------ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCceEEEeCCCCH-H-HHHHHh--cCCCEEE--------------ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEe
Confidence 3456778887763 4 666666 8999775 46888999 999999999997 544445555
Q ss_pred EEe---------ccCCCCCcHHHHH-HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC---C
Q psy2386 120 KHR---------IGIDDINSYDFVR-DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP---E 186 (311)
Q Consensus 120 KiR---------~g~~~~~~~~~~~-e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~---~ 186 (311)
|++ .||...... ++. ++++.+++. ++.|++|++++ .+.++ + .||+.++++++.+| +
T Consensus 137 k~~~~~g~~V~~~gw~~~t~~-~~~~e~a~~~~~~-a~~il~t~i~~-dG~~~-------G-~d~eli~~l~~~~~~~~~ 205 (260)
T 2agk_A 137 RKTQDGRWIVAMNKWQTLTDL-ELNADTFRELRKY-TNEFLIHAADV-EGLCG-------G-IDELLVSKLFEWTKDYDD 205 (260)
T ss_dssp EEEETTEEEEEETTTTEEEEE-EESHHHHHHHTTT-CSEEEEEC--------C-------C-CCHHHHHHHHHHHTTCSS
T ss_pred eecCCCceEEEEcCCccccCc-cHHHHHHHHHHHh-cCEEEEEeecc-ccCcC-------C-CCHHHHHHHHHhhcccCC
Confidence 533 256653221 235 899999999 99999999985 22222 2 39999999999874 6
Q ss_pred CeEEEecCCCCHHHHHHHHh---hcCEEEEehhh--hhCC-cchHHhHhhh
Q psy2386 187 LEIIINGGIKTKKEIDLHLN---YIDGVMLGREA--YKNP-FLMSNFDLNY 231 (311)
Q Consensus 187 ipvi~nGgI~s~~da~~~l~---~adgVmigRa~--l~~P-~i~~~~~~~~ 231 (311)
+|||+||||.|++|+.++++ .||+||+||++ +.+| |.|.++.+.+
T Consensus 206 iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~ 256 (260)
T 2agk_A 206 LKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWN 256 (260)
T ss_dssp CEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHH
Confidence 99999999999999999995 49999999997 9999 9999987653
No 46
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.69 E-value=3.5e-16 Score=139.53 Aligned_cols=156 Identities=16% Similarity=0.309 Sum_probs=124.0
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc----cce----
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV----EID---- 116 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~----~~p---- 116 (311)
+.|+++-.+=.+|++. +.+.++|+|.|-+ |+.++.+|+.+.++++.+...+ +.+
T Consensus 74 ~ipv~v~ggi~~~~~~----~~~l~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~ 135 (244)
T 2y88_A 74 DVQVELSGGIRDDESL----AAALATGCARVNV--------------GTAALENPQWCARVIGEHGDQVAVGLDVQIIDG 135 (244)
T ss_dssp SSEEEEESSCCSHHHH----HHHHHTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCcEEEECCCCCHHHH----HHHHHcCCCEEEE--------------CchHhhChHHHHHHHHHcCCCEEEEEeccccCC
Confidence 5788887777888863 3444579999977 4566789999999999876432 333
Q ss_pred -eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC
Q psy2386 117 -ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 195 (311)
Q Consensus 117 -vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI 195 (311)
.+||+| ||.+... ...++++.+++.|++.|.+|+|+. .+.+ .+ .+|+.++++++.+ ++||+++|||
T Consensus 136 ~~~v~~~-g~~~~~~--~~~e~~~~~~~~G~~~i~~~~~~~-~~~~-------~g-~~~~~~~~l~~~~-~ipvia~GGI 202 (244)
T 2y88_A 136 EHRLRGR-GWETDGG--DLWDVLERLDSEGCSRFVVTDITK-DGTL-------GG-PNLDLLAGVADRT-DAPVIASGGV 202 (244)
T ss_dssp EEEEEEG-GGTEEEE--EHHHHHHHHHHTTCCCEEEEETTT-TTTT-------SC-CCHHHHHHHHTTC-SSCEEEESCC
T ss_pred CCEEEEC-CccCCCC--CHHHHHHHHHhCCCCEEEEEecCC-cccc-------CC-CCHHHHHHHHHhC-CCCEEEECCC
Confidence 368888 8875432 357899999999999999999975 1111 12 4899999999987 8999999999
Q ss_pred CCHHHHHHHHh----hcCEEEEehhhhhCCcchHHhHhhh
Q psy2386 196 KTKKEIDLHLN----YIDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 196 ~s~~da~~~l~----~adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
.+++|+.++++ .||+||+||+++.+||.+.++.+.+
T Consensus 203 ~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~~~~ 242 (244)
T 2y88_A 203 SSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAV 242 (244)
T ss_dssp CSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHT
T ss_pred CCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHHHHh
Confidence 99999999995 5999999999999999999987653
No 47
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=1.9e-16 Score=145.41 Aligned_cols=154 Identities=19% Similarity=0.226 Sum_probs=112.4
Q ss_pred HHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCC-------------
Q psy2386 61 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD------------- 127 (311)
Q Consensus 61 ~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~------------- 127 (311)
++.|+.+++.|+++|... ||+|+..+...|+++|++|+.+.+|.+ ++++||+.|.|+||.+
T Consensus 27 ~e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~I 100 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDMI 100 (330)
T ss_dssp HHHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCEE
Confidence 557888889999999443 399999999999999999999888864 5789999999999831
Q ss_pred ---------C--Cc-------------HHHHHHHHHHHHHcCCCEEEEec--------------Cc------------c-
Q psy2386 128 ---------I--NS-------------YDFVRDFVGTVSSAGCRTFIVHA--------------RN------------A- 156 (311)
Q Consensus 128 ---------~--~~-------------~~~~~e~~~~l~~~G~~~itvh~--------------Rt------------~- 156 (311)
+ .. ..++-|.++++ +.|+++|+.|| || .
T Consensus 101 d~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~ 179 (330)
T 2yzr_A 101 DESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDE 179 (330)
T ss_dssp EEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred ehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHH
Confidence 0 00 01256777877 99999999999 55 0
Q ss_pred -ccc-----c--C----------CCCcCC--CCCc------------CcHHHHHHHHHhCCCCeE--EEecCCCCHHHHH
Q psy2386 157 -FLK-----K--L----------NPKQNR--KIPI------------LKYNFVYNLKKDFPELEI--IINGGIKTKKEID 202 (311)
Q Consensus 157 -~~~-----G--~----------~g~~~~--~~~~------------~~~~~i~~i~~~~~~ipv--i~nGgI~s~~da~ 202 (311)
.+. | | .|-.++ ..++ ..++.++++++.. ++|| |++|||.|++|+.
T Consensus 180 El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~-~IPVV~VAeGGI~Tpeda~ 258 (330)
T 2yzr_A 180 EVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG-RLPVVNFAAGGVATPADAA 258 (330)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT-SCSSEEEECSCCCSHHHHH
T ss_pred HHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC-CCCeEEEEECCCCCHHHHH
Confidence 000 0 1 110000 0111 1238899999987 7998 6999999999999
Q ss_pred HHHhh-cCEEEEehhhh--hCCc
Q psy2386 203 LHLNY-IDGVMLGREAY--KNPF 222 (311)
Q Consensus 203 ~~l~~-adgVmigRa~l--~~P~ 222 (311)
++++. ||||+|||+++ .||.
T Consensus 259 ~~l~~GaDgV~VGsaI~~a~dP~ 281 (330)
T 2yzr_A 259 LMMQLGSDGVFVGSGIFKSENPL 281 (330)
T ss_dssp HHHHTTCSCEEESHHHHTSSCHH
T ss_pred HHHHcCcCEEeeHHHHhcCCCHH
Confidence 99987 99999999999 5554
No 48
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.62 E-value=1e-14 Score=135.96 Aligned_cols=186 Identities=9% Similarity=0.116 Sum_probs=139.5
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCC
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGC 81 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gC 81 (311)
|+|+..++..+.+.|..++..+.+++.+.+...-.+.-+ ..+.|+.++++..+|+ +.+.++.+.+.|+|.|.+|+||
T Consensus 36 gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~--~~~~p~gVnl~~~~~~-~~~~~~~~~~~g~d~V~l~~g~ 112 (326)
T 3bo9_A 36 WAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQ--KTDKPFGVNIILVSPW-ADDLVKVCIEEKVPVVTFGAGN 112 (326)
T ss_dssp TTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHT--TCSSCEEEEEETTSTT-HHHHHHHHHHTTCSEEEEESSC
T ss_pred CCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHH--hcCCCEEEEEeccCCC-HHHHHHHHHHCCCCEEEECCCC
Confidence 789999999999998667888888776655310011111 1257999999986664 4556677778899999999999
Q ss_pred CccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccC
Q psy2386 82 PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKL 161 (311)
Q Consensus 82 P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~ 161 (311)
|. ++++.+++ .+++|.+++.. .+.++.+++.|+|+|.++++. ..|.
T Consensus 113 p~--------------------~~~~~l~~-~g~~v~~~v~s-----------~~~a~~a~~~GaD~i~v~g~~--~GG~ 158 (326)
T 3bo9_A 113 PT--------------------KYIRELKE-NGTKVIPVVAS-----------DSLARMVERAGADAVIAEGME--SGGH 158 (326)
T ss_dssp CH--------------------HHHHHHHH-TTCEEEEEESS-----------HHHHHHHHHTTCSCEEEECTT--SSEE
T ss_pred cH--------------------HHHHHHHH-cCCcEEEEcCC-----------HHHHHHHHHcCCCEEEEECCC--CCcc
Confidence 83 12344554 37888887631 456788899999999999876 3454
Q ss_pred CCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcc--hHHhHhhh
Q psy2386 162 NPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL--MSNFDLNY 231 (311)
Q Consensus 162 ~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i--~~~~~~~~ 231 (311)
+|. ..+|+.+.++++.+ ++||+++|||.|++|+.+++.. ||+|++||+++..+.. -..+++.+
T Consensus 159 ~G~------~~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~~~~k~~~ 224 (326)
T 3bo9_A 159 IGE------VTTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKI 224 (326)
T ss_dssp CCS------SCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSCCSCHHHHHHH
T ss_pred CCC------ccHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccccccHHHHHHH
Confidence 442 35899999999988 8999999999999999999987 9999999999988763 33444444
No 49
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.62 E-value=3.3e-15 Score=133.64 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=110.8
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCC
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 126 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~ 126 (311)
-+|..+ .++ +.|++++++|+..|....+||.... +. .|.+-|.+|+.+.+ +++++++||..|.|+|.
T Consensus 13 ~vimdv--~~~----eqa~iae~aGa~av~~l~~~p~d~r-~~-gGv~Rm~dp~~I~~----I~~aVsIPVm~k~righ- 79 (291)
T 3o07_A 13 GVIMDV--VTP----EQAKIAEKSGACAVMALESIPADMR-KS-GKVCRMSDPKMIKD----IMNSVSIPVMAKVRIGH- 79 (291)
T ss_dssp CEEEEE--SSH----HHHHHHHHHTCSEEEECSSCHHHHH-TT-TCCCCCCCHHHHHH----HHTTCSSCEEEEEETTC-
T ss_pred Ceeeec--CCH----HHHHHHHHhCchhhhhccCCCchhh-hc-CCccccCCHHHHHH----HHHhCCCCeEEEEecCc-
Confidence 356665 233 3578888999999999999999865 33 37889999988655 56778999999999974
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEec------------------------Cc-----------------c---------
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVHA------------------------RN-----------------A--------- 156 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh~------------------------Rt-----------------~--------- 156 (311)
..-++.|++.|+|+|--+- |+ .
T Consensus 80 --------~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~ 151 (291)
T 3o07_A 80 --------FVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVS 151 (291)
T ss_dssp --------HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTH
T ss_pred --------HHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHH
Confidence 1236677777887774211 00 0
Q ss_pred --------------ccccC-CCCcC--C-CCCcCcHHHHHHHHHhCCCCeE--EEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 157 --------------FLKKL-NPKQN--R-KIPILKYNFVYNLKKDFPELEI--IINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 157 --------------~~~G~-~g~~~--~-~~~~~~~~~i~~i~~~~~~ipv--i~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
.+.|| +..+- . ..-.++|++++++++.. ++|| |+||||.|++|+.++++. ||||||||
T Consensus 152 ~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~-~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGr 230 (291)
T 3o07_A 152 EAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG-KLPVVNFAAGGVATPADAALLMQLGCDGVFVGS 230 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT-SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECG
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc-CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEch
Confidence 01223 11000 0 01247899999999986 8998 579999999999999976 99999999
Q ss_pred hhhhCCc
Q psy2386 216 EAYKNPF 222 (311)
Q Consensus 216 a~l~~P~ 222 (311)
|++..+.
T Consensus 231 AI~~s~D 237 (291)
T 3o07_A 231 GIFKSSN 237 (291)
T ss_dssp GGGGSSC
T ss_pred HHhCCCC
Confidence 9987443
No 50
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.62 E-value=1.6e-14 Score=136.78 Aligned_cols=184 Identities=13% Similarity=0.138 Sum_probs=138.1
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecceeccccc-C--CchhccccCCCCCCeEEEecCCCHH--------------------
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-G--NKKHCLDFNAEEHPIAFQVGDNEPK-------------------- 58 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv~a~~l~-~--~~~~~l~~~~~~~p~~~Ql~g~~~~-------------------- 58 (311)
|+|+..++..+.+.|..++..++|++.+.+. . .....+ +.|+.|||+...+.
T Consensus 21 gvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~-----~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~ 95 (369)
T 3bw2_A 21 GVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLT-----GRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAW 95 (369)
T ss_dssp TTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHC-----CSCEEEEEECCCCCC---CHHHHHHHHTHHHHHH
T ss_pred CCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhC-----CCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHH
Confidence 4899999999999996688889999888774 1 111222 36899999986542
Q ss_pred --------------HHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 59 --------------KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 59 --------------~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
.+.+.++.+.+.|+|.|.+++|||.. ++++.+++ .+++|.+++..
T Consensus 96 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~-------------------~~i~~~~~-~g~~v~~~v~t- 154 (369)
T 3bw2_A 96 YETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDR-------------------EVIARLRR-AGTLTLVTATT- 154 (369)
T ss_dssp TTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCH-------------------HHHHHHHH-TTCEEEEEESS-
T ss_pred cCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcH-------------------HHHHHHHH-CCCeEEEECCC-
Confidence 14556677888999999999999842 34555555 37888887631
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCC-----cCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP-----ILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~-----~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
.+.++.+++.|+|+|.++++. .+|+.|....... ...|+.+.++++.+ ++||++.|||.+++
T Consensus 155 ----------~~~a~~a~~~GaD~i~v~g~~--~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaaGGI~~~~ 221 (369)
T 3bw2_A 155 ----------PEEARAVEAAGADAVIAQGVE--AGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVAAGGIMRGG 221 (369)
T ss_dssp ----------HHHHHHHHHTTCSEEEEECTT--CSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEESSCCSHH
T ss_pred ----------HHHHHHHHHcCCCEEEEeCCC--cCCcCCCcccccccccccccHHHHHHHHHHhc-CceEEEECCCCCHH
Confidence 345788899999999998875 2444332111111 12399999999988 89999999999999
Q ss_pred HHHHHHhh-cCEEEEehhhhhCCcch
Q psy2386 200 EIDLHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 200 da~~~l~~-adgVmigRa~l~~P~i~ 224 (311)
++.++++. ||+|++||+++.+|+..
T Consensus 222 ~~~~~l~~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 222 QIAAVLAAGADAAQLGTAFLATDESG 247 (369)
T ss_dssp HHHHHHHTTCSEEEESHHHHTSTTCC
T ss_pred HHHHHHHcCCCEEEEChHHhCCcccC
Confidence 99999987 99999999999999763
No 51
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.61 E-value=9.5e-15 Score=137.77 Aligned_cols=234 Identities=12% Similarity=0.069 Sum_probs=138.8
Q ss_pred HHHHHHHHHhCCCcEEEecceecccccC-CchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCcc
Q psy2386 6 RHCRMFHRQITRYSWLYTEMFTTQAILG-NKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSN 84 (311)
Q Consensus 6 ~~fR~l~~~~g~~~l~~temv~a~~l~~-~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~ 84 (311)
..|++.|+++|- .+...||..+-.-.. .+....+.. ++.|++.+|....+.+ ++.+.++..|+|.+.||+-..+.
T Consensus 106 ~~lA~~a~~~G~-~~~vGs~~~~le~~~~~~~~v~r~~-P~~~~ianig~~~~~e--~~~~~ve~~~adal~ihln~~qe 181 (365)
T 3sr7_A 106 EKLAQVADTCGL-LFVTGSYSTALKNPDDTSYQVKKSR-PHLLLATNIGLDKPYQ--AGLQAVRDLQPLFLQVHINLMQE 181 (365)
T ss_dssp HHHHHHHHHHTC-CEEC------------------------CCEEEEEETTSCHH--HHHHHHHHHCCSCEEEEECHHHH
T ss_pred HHHHHHHHHcCC-CeecccccccccCccccceEehhhC-CCCcEEEEeCCCCCHH--HHHHHHHhcCCCEEEEecccccc
Confidence 349999999994 688888875211001 111223323 4789999998755432 55666677789988888665443
Q ss_pred ccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc--ccc--c
Q psy2386 85 RVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--FLK--K 160 (311)
Q Consensus 85 ~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~--~~~--G 160 (311)
.+...| -.+.+...+.++++++.+++||.||. +|+... .+.++.+.++|+|+|+|+++.. +.+ .
T Consensus 182 ~~~p~G-----d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s------~e~A~~l~~aGad~I~V~g~GGt~~a~ie~ 249 (365)
T 3sr7_A 182 LLMPEG-----EREFRSWKKHLSDYAKKLQLPFILKE-VGFGMD------VKTIQTAIDLGVKTVDISGRGGTSFAYIEN 249 (365)
T ss_dssp HTSSSS-----CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCC------HHHHHHHHHHTCCEEECCCBC---------
T ss_pred ccCCCC-----CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCC------HHHHHHHHHcCCCEEEEeCCCCcccchhhc
Confidence 332221 13344567889999999999999994 565431 4678999999999999976532 100 0
Q ss_pred CCCCc---CCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccCCC
Q psy2386 161 LNPKQ---NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLP 236 (311)
Q Consensus 161 ~~g~~---~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~ 236 (311)
+.+.. ....+....+.+.+++...+++|||++|||+|+.|+.+++.. ||+||+||+++. .... . +
T Consensus 250 ~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~-----a~~~----~-G- 318 (365)
T 3sr7_A 250 RRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLE-----LVEQ----H-S- 318 (365)
T ss_dssp -----CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHH-----HHHH----S-C-
T ss_pred cccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHH-----HHHh----c-C-
Confidence 00000 000111233566666554446999999999999999999987 999999996643 2211 1 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHh-cCCcccHHHHH
Q psy2386 237 QYKIPTRIDIINRMILYIRQQLN-NNKIKNINSIT 270 (311)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 270 (311)
+....+.++.+.++++..+. .|. ..+..++
T Consensus 319 ---~~~v~~~l~~l~~eL~~~m~~~G~-~si~eL~ 349 (365)
T 3sr7_A 319 ---VHEVIAIVNGWKEDLRLIMCALNC-QTIAELR 349 (365)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHTTC-SSTGGGG
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHhCC-cCHHHhc
Confidence 12234667777777777776 664 3344443
No 52
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.61 E-value=6.5e-15 Score=137.92 Aligned_cols=201 Identities=9% Similarity=0.134 Sum_probs=147.8
Q ss_pred CCCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccc----cCcc-------------------cCc---ccC
Q psy2386 45 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ----NGFF-------------------GAI---LMT 97 (311)
Q Consensus 45 ~~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~----~~~~-------------------G~~---Ll~ 97 (311)
+.|.-.||. -.|.+...+-.++++++||..|=+..=.|..-.+ +.++ ++. -.-
T Consensus 121 ~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T 3sgz_A 121 EGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFP 200 (352)
T ss_dssp TCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CC
T ss_pred CccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhcc
Confidence 568899986 3477888888899999999998888766653111 0000 111 234
Q ss_pred ChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 98 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
||.+.-+.++++++.+++||.||.... .+.++.++++|+|+|+++++... + ....+..++.+
T Consensus 201 d~~~~w~~i~~lr~~~~~PvivK~v~~----------~e~A~~a~~~GaD~I~vsn~GG~-~-------~d~~~~~~~~L 262 (352)
T 3sgz_A 201 KASFCWNDLSLLQSITRLPIILKGILT----------KEDAELAMKHNVQGIVVSNHGGR-Q-------LDEVSASIDAL 262 (352)
T ss_dssp CTTCCHHHHHHHHHHCCSCEEEEEECS----------HHHHHHHHHTTCSEEEECCGGGT-S-------SCSSCCHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEecCc----------HHHHHHHHHcCCCEEEEeCCCCC-c-------cCCCccHHHHH
Confidence 677778899999999999999998731 46789999999999999654321 1 11235689999
Q ss_pred HHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHHH
Q psy2386 178 YNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYIR 255 (311)
Q Consensus 178 ~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
.++++.+. ++|||++|||+|.+|+.+++.. ||+|||||+++..+. .. + +....+.++.+.++++
T Consensus 263 ~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~-----~~---G------~~gv~~~l~~l~~el~ 328 (352)
T 3sgz_A 263 REVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLA-----CK---G------EDGVKEVLDILTAELH 328 (352)
T ss_dssp HHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHH-----HH---H------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHH-----hc---C------cHHHHHHHHHHHHHHH
Confidence 99988763 5999999999999999999987 999999998653322 11 1 1234567888888888
Q ss_pred HHHh-cCCcccHHHHHHhHHHHhc
Q psy2386 256 QQLN-NNKIKNINSITRHMLGLMK 278 (311)
Q Consensus 256 ~~~~-~g~~~~~~~~~k~~~~~~~ 278 (311)
..+. .|. ..+..+++++.||.|
T Consensus 329 ~~m~~~G~-~~i~el~~~~~~y~k 351 (352)
T 3sgz_A 329 RCMTLSGC-QSVAEISPDLIQFSR 351 (352)
T ss_dssp HHHHHHTC-SBGGGCCGGGBSSCC
T ss_pred HHHHHhCC-CcHHHHhhhcchhcc
Confidence 8777 775 468889999998865
No 53
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.61 E-value=1.7e-14 Score=128.75 Aligned_cols=157 Identities=15% Similarity=0.275 Sum_probs=119.5
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE----
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK---- 120 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK---- 120 (311)
+.|+++-.+=.+|++. +.+.++|+|.|-+ |+.++.+|+.+.++++.....+.+.++++
T Consensus 75 ~ipv~v~ggI~~~~~~----~~~l~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v 136 (244)
T 1vzw_A 75 DIKVELSGGIRDDDTL----AAALATGCTRVNL--------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGTTL 136 (244)
T ss_dssp SSEEEEESSCCSHHHH----HHHHHTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEE
T ss_pred CCcEEEECCcCCHHHH----HHHHHcCCCEEEE--------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCCEE
Confidence 5788887666888863 3444579999876 45677889999999988764443444433
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 121 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
.+.||.+... ...++++.+++.|++.|.+|++++. +.+ . ..+|+.++++++.+ ++||+++|||.+++|
T Consensus 137 ~~~g~~~~~~--~~~e~~~~~~~~G~~~i~~~~~~~~-~~~-------~-g~~~~~~~~i~~~~-~ipvia~GGI~~~~d 204 (244)
T 1vzw_A 137 RGRGWTRDGG--DLYETLDRLNKEGCARYVVTDIAKD-GTL-------Q-GPNLELLKNVCAAT-DRPVVASGGVSSLDD 204 (244)
T ss_dssp CCSSSCCCCC--BHHHHHHHHHHTTCCCEEEEEC----------------CCCHHHHHHHHHTC-SSCEEEESCCCSHHH
T ss_pred EEcCcccCCC--CHHHHHHHHHhCCCCEEEEeccCcc-ccc-------C-CCCHHHHHHHHHhc-CCCEEEECCCCCHHH
Confidence 1357776443 3578899999999999999988641 111 1 14899999999987 899999999999999
Q ss_pred HHHHHh----hcCEEEEehhhhhCCcchHHhHhhh
Q psy2386 201 IDLHLN----YIDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 201 a~~~l~----~adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+.++++ .||+||+||+++.+||.+.++.+.+
T Consensus 205 ~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 205 LRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp HHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred HHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHHh
Confidence 999995 4999999999999999999887654
No 54
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.60 E-value=2.1e-14 Score=133.86 Aligned_cols=179 Identities=11% Similarity=0.109 Sum_probs=135.0
Q ss_pred CCCCHHHHHHHHHhCCCcEEEeccee-cccccCCchhccccCCCCCCeEEEecCC----CHHHHHHHHHHHHHcCCCEEE
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMFT-TQAILGNKKHCLDFNAEEHPIAFQVGDN----EPKKLAKSAKIIQKWGYDEIN 76 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv~-a~~l~~~~~~~l~~~~~~~p~~~Ql~g~----~~~~~~~aa~~~~~~g~d~Id 76 (311)
|+|+..++..+.+.|..++..+++.+ .+.+...-.+.-+. .+.|+.++++.+ +++ +.+.++.+.+.|+|.|.
T Consensus 25 gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~--~~~p~~v~l~v~~~~~~~~-~~~~~~~~~~~g~d~V~ 101 (328)
T 2gjl_A 25 WVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCREL--TDRPFGVNLTLLPTQKPVP-YAEYRAAIIEAGIRVVE 101 (328)
T ss_dssp TTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHH--CSSCCEEEEEECCCSSCCC-HHHHHHHHHHTTCCEEE
T ss_pred CCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHh--cCCCeEEEEeccccccCcc-HHHHHHHHHhcCCCEEE
Confidence 78999999999999866788887765 44432100011111 247899999987 333 66677788889999999
Q ss_pred eccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc
Q psy2386 77 LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA 156 (311)
Q Consensus 77 iN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~ 156 (311)
+|+|||. ++++.+++. ++|+.+++.. .+.++.+.+.|+|+|.+++++.
T Consensus 102 ~~~g~p~--------------------~~~~~l~~~-gi~vi~~v~t-----------~~~a~~~~~~GaD~i~v~g~~~ 149 (328)
T 2gjl_A 102 TAGNDPG--------------------EHIAEFRRH-GVKVIHKCTA-----------VRHALKAERLGVDAVSIDGFEC 149 (328)
T ss_dssp EEESCCH--------------------HHHHHHHHT-TCEEEEEESS-----------HHHHHHHHHTTCSEEEEECTTC
T ss_pred EcCCCcH--------------------HHHHHHHHc-CCCEEeeCCC-----------HHHHHHHHHcCCCEEEEECCCC
Confidence 9998871 345556654 7888876531 3557788999999999998763
Q ss_pred ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 157 FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 157 ~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
.|..|.. ...+|+.+.++++.+ ++||+++|||.+++++.+++.. ||+|++||+++..|.
T Consensus 150 --GG~~G~~----~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 150 --AGHPGED----DIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINMGTRFLATRE 209 (328)
T ss_dssp --SBCCCSS----CCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred --CcCCCCc----cccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcc
Confidence 3443331 236899999999987 8999999999999999999986 999999999999987
No 55
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.59 E-value=3.4e-16 Score=140.25 Aligned_cols=156 Identities=16% Similarity=0.217 Sum_probs=34.9
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHh-ccc----cce---
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMR-DSV----EID--- 116 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~-~~~----~~p--- 116 (311)
..|+++.=+=.+++++.++ .+.|+|+|-| |+.++.+|+++.++.+.+- +.+ +.+
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~----l~~Gad~V~i--------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~ 140 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEA----FLRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 140 (247)
T ss_dssp CSCEEEESCCCSHHHHHHH----HHTTCSEECC--------------SHHHHHCTHHHHHHHHHHC--------------
T ss_pred CCCEEEeCCCCCHHHHHHH----HHcCCCeeeh--------------hhHHhhChHHHHHHHHHhCCCcEEEEEEeccCC
Confidence 5687775444677775433 3578999855 5778899999999988773 322 222
Q ss_pred --eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 117 --ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 117 --vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
..|+++ ||.+.... ...++++.+++.|++.|.+|+++. .+.+. ..+|+.++++++.+ ++|||++||
T Consensus 141 ~~~~v~~~-g~~~~~~~-~~~~~a~~~~~~G~~~i~~t~~~~-~g~~~--------g~~~~~~~~i~~~~-~iPvia~GG 208 (247)
T 3tdn_A 141 GEFMVFTY-SGKKNTGI-LLRDWVVEVEKRGAGEILLTSIDR-DGTKS--------GYDTEMIRFVRPLT-TLPIIASGG 208 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEC-CCcccCCC-CHHHHHHHHHhcCCCEEEEecccC-CCCcC--------CCCHHHHHHHHHhC-CCCEEEECC
Confidence 245555 77654322 357889999999999999998764 11111 14889999999987 899999999
Q ss_pred CCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhh
Q psy2386 195 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 195 I~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~ 230 (311)
|.|++|+.++++. ||+|++||+++.+||+++++.+.
T Consensus 209 I~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 209 AGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp -------------------------------------
T ss_pred CCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHHh
Confidence 9999999999987 99999999999999999998764
No 56
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.58 E-value=1.8e-14 Score=128.46 Aligned_cols=185 Identities=11% Similarity=0.138 Sum_probs=128.3
Q ss_pred HHhCCCcEEEecceecccccCCch---hccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccC
Q psy2386 13 RQITRYSWLYTEMFTTQAILGNKK---HCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNG 89 (311)
Q Consensus 13 ~~~g~~~l~~temv~a~~l~~~~~---~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~ 89 (311)
.+.|...+.+|++..+....+... +.+. ..+.|+++.=+=+++++..++ .+.|+|+|-+
T Consensus 40 ~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~--~~~ipvi~~Ggi~~~~~~~~~----~~~Gad~V~l------------ 101 (241)
T 1qo2_A 40 IEEGFTLIHVVDLSNAIENSGENLPVLEKLS--EFAEHIQIGGGIRSLDYAEKL----RKLGYRRQIV------------ 101 (241)
T ss_dssp HHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG--GGGGGEEEESSCCSHHHHHHH----HHTTCCEEEE------------
T ss_pred HHcCCCEEEEecccccccCCchhHHHHHHHH--hcCCcEEEECCCCCHHHHHHH----HHCCCCEEEE------------
Confidence 456766788888655422211111 2222 224565554333556655443 3478998844
Q ss_pred cccCcccCChHHHHHHHHHHhcccccee-----EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCC
Q psy2386 90 FFGAILMTKPLLVSDCIKAMRDSVEIDI-----TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPK 164 (311)
Q Consensus 90 ~~G~~Ll~~~~~~~~iv~~v~~~~~~pv-----svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~ 164 (311)
|+.++.+|+.+.++ +...+.+-+.+ .|++ .||.+.... ...++++.+++.|++.|.+|++++ .+.+.|
T Consensus 102 --g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~-~g~~~~~~~-~~~e~~~~~~~~G~~~i~~t~~~~-~g~~~g- 174 (241)
T 1qo2_A 102 --SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF-KGWLAEEEI-DPVSLLKRLKEYGLEEIVHTEIEK-DGTLQE- 174 (241)
T ss_dssp --CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC-TTCSSCSCC-CHHHHHHHHHTTTCCEEEEEETTH-HHHTCC-
T ss_pred --CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE-CCceecCCC-CHHHHHHHHHhCCCCEEEEEeecc-cccCCc-
Confidence 67788999999888 77653322223 3444 478754322 256889999999999999999864 111111
Q ss_pred cCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-------cCEEEEehhhhhCCcchHHhHhh
Q psy2386 165 QNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-------IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 165 ~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-------adgVmigRa~l~~P~i~~~~~~~ 230 (311)
.||+.++++++.+ ++|||++|||.|++|+.++++. |||||+||+++..++-+.++.+.
T Consensus 175 -------~~~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 175 -------HDFSLTKKIAIEA-EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp -------CCHHHHHHHHHHH-TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred -------CCHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 4899999999988 8999999999999999999964 99999999999999988887764
No 57
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.57 E-value=4.1e-14 Score=132.47 Aligned_cols=178 Identities=12% Similarity=0.093 Sum_probs=127.8
Q ss_pred CCCCHHHHH-HHHHhCCCcEEEecceecccccCCchhcccc-CCCCCCeEEEecCCCHHHHHHHHHHHHHcC--CCEEEe
Q psy2386 2 NLTDRHCRM-FHRQITRYSWLYTEMFTTQAILGNKKHCLDF-NAEEHPIAFQVGDNEPKKLAKSAKIIQKWG--YDEINL 77 (311)
Q Consensus 2 ~~td~~fR~-l~~~~g~~~l~~temv~a~~l~~~~~~~l~~-~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g--~d~Idi 77 (311)
++|+..|.. +++..| .++++++|.... ..+++. .+...|+.+|+ |.+++.+.. ++.+.+.| ++.|++
T Consensus 56 g~s~~~la~a~~~~gg-~g~~~~~~~~~~------~~~i~~~~~~g~~v~v~~-g~~~~~~~~-a~~~~~~g~~~~~i~i 126 (336)
T 1ypf_A 56 TIIDERIATYLAENNY-FYIMHRFQPEKR------ISFIRDMQSRGLIASISV-GVKEDEYEF-VQQLAAEHLTPEYITI 126 (336)
T ss_dssp TTCCHHHHHHHHHTTC-CCCCCCSSGGGH------HHHHHHHHHTTCCCEEEE-CCSHHHHHH-HHHHHHTTCCCSEEEE
T ss_pred CCChHHHHHHHHhCCC-EEEecCCCCHHH------HHHHHHHHhcCCeEEEeC-CCCHHHHHH-HHHHHhcCCCCCEEEE
Confidence 578889955 566666 578888775321 112211 12345899996 888887765 55677778 999999
Q ss_pred ccCCCccccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEE--ecC
Q psy2386 78 NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV--HAR 154 (311)
Q Consensus 78 N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itv--h~R 154 (311)
|++. | ++....++++++++.++ .||. |-.. . ..+.++.++++|+|+|++ |++
T Consensus 127 ~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi-~G~v--~-------s~e~A~~a~~aGad~Ivvs~hgG 181 (336)
T 1ypf_A 127 DIAH----------G-----HSNAVINMIQHIKKHLPESFVI-AGNV--G-------TPEAVRELENAGADATKVGIGPG 181 (336)
T ss_dssp ECSS----------C-----CSHHHHHHHHHHHHHCTTSEEE-EEEE--C-------SHHHHHHHHHHTCSEEEECSSCS
T ss_pred ECCC----------C-----CcHHHHHHHHHHHHhCCCCEEE-ECCc--C-------CHHHHHHHHHcCCCEEEEecCCC
Confidence 9742 2 67888899999999885 5554 4211 1 147789999999999999 665
Q ss_pred ccc---cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh
Q psy2386 155 NAF---LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 155 t~~---~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~ 219 (311)
+.. ..+..+ .+...++.+.++++.+ ++|||++|||+|++|+.+++.. ||+||+||+++.
T Consensus 182 ~~~~~~~~~~~g-----~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 182 KVCITKIKTGFG-----TGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp TTCHHHHHHSCS-----STTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred ceeecccccCcC-----CchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 321 111111 1112688999999988 8999999999999999999987 999999999984
No 58
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.56 E-value=9.2e-14 Score=124.36 Aligned_cols=161 Identities=10% Similarity=0.106 Sum_probs=120.6
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhc-c--cccee---
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRD-S--VEIDI--- 117 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~-~--~~~pv--- 117 (311)
.+.|+++.=+=+++++..++. +.|+|+|-+ |+.++.+|+.+.++.+.... . +++++
T Consensus 74 ~~iPvi~~Ggi~~~~~~~~~~----~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~ 135 (252)
T 1ka9_F 74 VFIPLTVGGGVRSLEDARKLL----LSGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWR 135 (252)
T ss_dssp CCSCEEEESSCCSHHHHHHHH----HHTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEE
T ss_pred CCCCEEEECCcCCHHHHHHHH----HcCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecC
Confidence 367888765556676554433 468999876 56778899999999888752 2 22222
Q ss_pred ----EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 118 ----TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 118 ----svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
.|++ .||.+.... ...++++.+++.|++.|.+|+++. .|. ..+ .||+.++++++.+ ++||+++|
T Consensus 136 ~g~~~v~~-~g~~~~~~~-~~~e~~~~~~~~G~~~i~~~~~~~--~g~------~~g-~~~~~i~~l~~~~-~ipvia~G 203 (252)
T 1ka9_F 136 GDFPEVHV-AGGRVPTGL-HAVEWAVKGVELGAGEILLTSMDR--DGT------KEG-YDLRLTRMVAEAV-GVPVIASG 203 (252)
T ss_dssp TTEEEEEE-TTTTEEEEE-EHHHHHHHHHHHTCCEEEEEETTT--TTT------CSC-CCHHHHHHHHHHC-SSCEEEES
T ss_pred CCCEEEEE-CCCccccCC-cHHHHHHHHHHcCCCEEEEecccC--CCC------cCC-CCHHHHHHHHHHc-CCCEEEeC
Confidence 3444 366653211 357889999999999999997653 111 112 4899999999998 89999999
Q ss_pred CCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccC
Q psy2386 194 GIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSN 234 (311)
Q Consensus 194 gI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~ 234 (311)
||.+++|+.++++. |||||+||+++.+||.+.++.+.+...
T Consensus 204 GI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~ 245 (252)
T 1ka9_F 204 GAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEK 245 (252)
T ss_dssp CCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 99999999999976 999999999999999999988776543
No 59
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.55 E-value=9.9e-14 Score=124.21 Aligned_cols=192 Identities=11% Similarity=0.118 Sum_probs=133.5
Q ss_pred HHHhCCCcEEEecceecccccCCch---hccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCcccccc
Q psy2386 12 HRQITRYSWLYTEMFTTQAILGNKK---HCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQN 88 (311)
Q Consensus 12 ~~~~g~~~l~~temv~a~~l~~~~~---~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~ 88 (311)
+.+.|+..+.++++-....-..... +.+. ...+.|+++--+=+++++..+ +.++|+|+|-+
T Consensus 39 ~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~~ipvi~~ggI~~~~~~~~----~~~~Gad~V~l----------- 102 (253)
T 1thf_D 39 YSEIGIDELVFLDITASVEKRKTMLELVEKVA-EQIDIPFTVGGGIHDFETASE----LILRGADKVSI----------- 102 (253)
T ss_dssp HHHTTCCEEEEEESSCSSSHHHHHHHHHHHHH-TTCCSCEEEESSCCSHHHHHH----HHHTTCSEEEE-----------
T ss_pred HHHcCCCEEEEECCchhhcCCcccHHHHHHHH-HhCCCCEEEeCCCCCHHHHHH----HHHcCCCEEEE-----------
Confidence 3456765677787653321111001 1121 223578888766678876433 33579999866
Q ss_pred CcccCcccCChHHHHHHHHHHhc-ccccee---------EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy2386 89 GFFGAILMTKPLLVSDCIKAMRD-SVEIDI---------TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFL 158 (311)
Q Consensus 89 ~~~G~~Ll~~~~~~~~iv~~v~~-~~~~pv---------svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~ 158 (311)
|+.++.+|+.+.++++.+.. .+.+.+ .|++ .||.+.... ...++++.+++.|++.|.+|++++ .
T Consensus 103 ---g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~-~g~~~~~~~-~~~e~~~~~~~~G~~~i~~~~~~~-~ 176 (253)
T 1thf_D 103 ---NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFT-YSGKKNTGI-LLRDWVVEVEKRGAGEILLTSIDR-D 176 (253)
T ss_dssp ---SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEE-TTTTEEEEE-EHHHHHHHHHHTTCSEEEEEETTT-T
T ss_pred ---ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEE-CCCccccCC-CHHHHHHHHHHCCCCEEEEEeccC-C
Confidence 56678899999999888753 222233 3444 366542211 256889999999999999998764 1
Q ss_pred ccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccC
Q psy2386 159 KKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSN 234 (311)
Q Consensus 159 ~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~ 234 (311)
+... + .+|+.++++++.+ ++||+++|||.+++|+.++++. ||+|++||+++.+||.+.++.+.+...
T Consensus 177 g~~~-------g-~~~~~~~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 177 GTKS-------G-YDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKH 244 (253)
T ss_dssp TSCS-------C-CCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHHT
T ss_pred CCCC-------C-CCHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHHc
Confidence 1111 1 4899999999987 8999999999999999999976 999999999999999998887766543
No 60
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.53 E-value=1.1e-13 Score=124.84 Aligned_cols=192 Identities=13% Similarity=0.076 Sum_probs=115.2
Q ss_pred HHHhCCCcEEEecceecccccCCchhccc-c-CCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccC
Q psy2386 12 HRQITRYSWLYTEMFTTQAILGNKKHCLD-F-NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNG 89 (311)
Q Consensus 12 ~~~~g~~~l~~temv~a~~l~~~~~~~l~-~-~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~ 89 (311)
+.+.|+..+.+|++..+....+.....++ . ...+.|+++.=+-++++++.++. +.|+|+|-+.
T Consensus 39 ~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~----~~Gad~v~lg----------- 103 (266)
T 2w6r_A 39 VEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF----LAGADKALAA----------- 103 (266)
T ss_dssp HHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHH----HHTCSEEECC-----------
T ss_pred HHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH----HcCCcHhhhh-----------
Confidence 45677656777776433211121111111 1 22367888864447777765444 4689988764
Q ss_pred cccCccc-C--ChHHHHHHHHHHh---cc--cccee-------EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecC
Q psy2386 90 FFGAILM-T--KPLLVSDCIKAMR---DS--VEIDI-------TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHAR 154 (311)
Q Consensus 90 ~~G~~Ll-~--~~~~~~~iv~~v~---~~--~~~pv-------svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~R 154 (311)
+.++ . +|+.+.++++... +. +++++ .|+++ ||...... ...++++.+++.|++.|.+|++
T Consensus 104 ---~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~-g~~~~~~~-~~~e~~~~~~~~G~~~i~~t~~ 178 (266)
T 2w6r_A 104 ---SVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTH-SGKKNTGI-LLRDWVVEVEKRGAGEILLTSI 178 (266)
T ss_dssp ---CCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEET-TTTEEEEE-EHHHHHHHHHHTTCSEEEEEET
T ss_pred ---HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEEC-CCceecch-hHHHHHHHHHHcCCCEEEEEee
Confidence 5555 4 7888888877655 22 22332 45553 66532211 2468899999999999999987
Q ss_pred ccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhcc
Q psy2386 155 NAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYS 233 (311)
Q Consensus 155 t~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~ 233 (311)
++ .+.+ . ..||+.++++++.+ ++|||++|||.+++|+.++++. ||||++|++++.+||.+.++.+.+..
T Consensus 179 ~~-~g~~-------~-g~~~~~i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~ 248 (266)
T 2w6r_A 179 DR-DGTK-------S-GYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDMRELKEYLKK 248 (266)
T ss_dssp TT-TTTC-------S-CCCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC---------------
T ss_pred cC-CCCc-------C-CCCHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCHHHHHHHHHH
Confidence 63 1111 1 24899999999987 8999999999999999999976 99999999999999999988876543
No 61
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.50 E-value=3e-13 Score=120.22 Aligned_cols=193 Identities=9% Similarity=0.085 Sum_probs=134.5
Q ss_pred HHHHHhCCCcEEEecceecccccCCch---hccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCcccc
Q psy2386 10 MFHRQITRYSWLYTEMFTTQAILGNKK---HCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRV 86 (311)
Q Consensus 10 ~l~~~~g~~~l~~temv~a~~l~~~~~---~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v 86 (311)
+.+.+.|...+.+++|.....-..... +.+. ...+.|+++.-+-.+++++.+ +.++|+|+|.||
T Consensus 40 ~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~-~~~~ipvi~~g~i~~~~~~~~----~~~~Gad~V~i~-------- 106 (253)
T 1h5y_A 40 VRYEEEGADEIAILDITAAPEGRATFIDSVKRVA-EAVSIPVLVGGGVRSLEDATT----LFRAGADKVSVN-------- 106 (253)
T ss_dssp HHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHH-HHCSSCEEEESSCCSHHHHHH----HHHHTCSEEEES--------
T ss_pred HHHHHcCCCEEEEEeCCccccCCcccHHHHHHHH-HhcCCCEEEECCCCCHHHHHH----HHHcCCCEEEEC--------
Confidence 344567765688887754311000001 1111 112578888777788876533 345799999998
Q ss_pred ccCcccCcccCChHHHHHHHHHHhc-----cccce-----eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc
Q psy2386 87 QNGFFGAILMTKPLLVSDCIKAMRD-----SVEID-----ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA 156 (311)
Q Consensus 87 ~~~~~G~~Ll~~~~~~~~iv~~v~~-----~~~~p-----vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~ 156 (311)
..++.+|+.+.++.+.... .++.+ +.|++|.++..... ...++++.+.+.|++.|.+|+++.
T Consensus 107 ------~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~--~~~e~~~~~~~~G~d~i~~~~~~~ 178 (253)
T 1h5y_A 107 ------TAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGL--DAVKWAKEVEELGAGEILLTSIDR 178 (253)
T ss_dssp ------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEE--EHHHHHHHHHHHTCSEEEEEETTT
T ss_pred ------hHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCC--CHHHHHHHHHhCCCCEEEEecccC
Confidence 2456789988888877542 11222 57888865533221 356889999999999999998864
Q ss_pred ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhcc
Q psy2386 157 FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYS 233 (311)
Q Consensus 157 ~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~ 233 (311)
.|. .. ..+++.++++++.+ ++||+++|||.+++|+.++++. ||+||+||+++.+++.+.++.+.+..
T Consensus 179 --~g~------~~-~~~~~~i~~l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~ 246 (253)
T 1h5y_A 179 --DGT------GL-GYDVELIRRVADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLKE 246 (253)
T ss_dssp --TTT------CS-CCCHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHH
T ss_pred --CCC------cC-cCCHHHHHHHHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 111 01 14899999999987 8999999999999999999976 99999999999999888777766543
No 62
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.44 E-value=1.8e-12 Score=124.11 Aligned_cols=142 Identities=13% Similarity=0.177 Sum_probs=105.7
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccC
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGI 125 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~ 125 (311)
++++.+.. +++ ..+.++.+.+.|+|.|+||+++ .+|+.+.++++++++.+ ++||.++.-.
T Consensus 143 ~~~~~i~~-~~~-~~~~a~~~~~~G~d~i~i~~~~---------------g~~~~~~e~i~~ir~~~~~~pviv~~v~-- 203 (404)
T 1eep_A 143 RVGAAVSI-DID-TIERVEELVKAHVDILVIDSAH---------------GHSTRIIELIKKIKTKYPNLDLIAGNIV-- 203 (404)
T ss_dssp CCEEEECS-CTT-HHHHHHHHHHTTCSEEEECCSC---------------CSSHHHHHHHHHHHHHCTTCEEEEEEEC--
T ss_pred eEEEEeCC-Chh-HHHHHHHHHHCCCCEEEEeCCC---------------CChHHHHHHHHHHHHHCCCCeEEEcCCC--
Confidence 46788865 333 3444566778899999999765 14688899999999988 8999884211
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEE------ecCccccccCCCCcCCCCCcCcHHHHHHHHH---hCCCCeEEEecCCC
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIV------HARNAFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIK 196 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itv------h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~---~~~~ipvi~nGgI~ 196 (311)
..+.++.++++|+|+|++ |.++....+.. ..+++.+..+++ .. ++|||++|||.
T Consensus 204 --------~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g--------~p~~~~l~~v~~~~~~~-~ipVia~GGI~ 266 (404)
T 1eep_A 204 --------TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVG--------VPQITAICDVYEACNNT-NICIIADGGIR 266 (404)
T ss_dssp --------SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCC--------CCHHHHHHHHHHHHTTS-SCEEEEESCCC
T ss_pred --------cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCC--------cchHHHHHHHHHHHhhc-CceEEEECCCC
Confidence 146789999999999999 22221112221 135666666665 44 79999999999
Q ss_pred CHHHHHHHHhh-cCEEEEehhhhhCCcch
Q psy2386 197 TKKEIDLHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 197 s~~da~~~l~~-adgVmigRa~l~~P~i~ 224 (311)
|++|+.+++.. ||+|++||+++..|+..
T Consensus 267 ~~~d~~~ala~GAd~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 267 FSGDVVKAIAAGADSVMIGNLFAGTKESP 295 (404)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHTBTTSS
T ss_pred CHHHHHHHHHcCCCHHhhCHHHhcCCCCC
Confidence 99999999987 99999999999887764
No 63
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.38 E-value=7.3e-12 Score=119.06 Aligned_cols=150 Identities=10% Similarity=0.048 Sum_probs=127.2
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
..|+-..+.+.+++.|+++|+.+.+.||+.|+|++|| +++...++++++|+++ ++++.++.+-
T Consensus 136 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~ 199 (384)
T 2pgw_A 136 AVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANE 199 (384)
T ss_dssp EEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTT
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCC
Confidence 3455566677899999999999999999999999886 5788899999999998 6888888887
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+. ++..++++.+++.|+++|. +. .++.||+..+++++.+ ++||++++.+.|++++.+
T Consensus 200 ~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~ 258 (384)
T 2pgw_A 200 GWSV----HDAINMCRKLEKYDIEFIE--------QP--------TVSWSIPAMAHVREKV-GIPIVADQAAFTLYDVYE 258 (384)
T ss_dssp CCCH----HHHHHHHHHHGGGCCSEEE--------CC--------SCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHH
T ss_pred CCCH----HHHHHHHHHHHhcCCCEEe--------CC--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHH
Confidence 7764 3578999999999999884 11 1246899999999998 799999999999999999
Q ss_pred HHhh--cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 204 HLNY--IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 204 ~l~~--adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+++. ||+|++..+.++.++-+.++.+..
T Consensus 259 ~i~~~~~d~v~ik~~~~GGit~~~~i~~~A 288 (384)
T 2pgw_A 259 ICRQRAADMICIGPREIGGIQPMMKAAAVA 288 (384)
T ss_dssp HHHTTCCSEEEECHHHHTSHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEcchhhCCHHHHHHHHHHH
Confidence 9975 999999999999999887776543
No 64
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.36 E-value=8e-12 Score=109.72 Aligned_cols=159 Identities=11% Similarity=0.149 Sum_probs=110.5
Q ss_pred CeEEEecCC----CHHHHHHHHHHHHHcCCCEEEec-----------cCCCccccccCc--------------------c
Q psy2386 47 PIAFQVGDN----EPKKLAKSAKIIQKWGYDEINLN-----------CGCPSNRVQNGF--------------------F 91 (311)
Q Consensus 47 p~~~Ql~g~----~~~~~~~aa~~~~~~g~d~IdiN-----------~gCP~~~v~~~~--------------------~ 91 (311)
-+.+|+.+. +++...+.|+.+.+.|+++|.++ .++|.-...+.. .
T Consensus 8 ~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 8 IVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp EEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 367888888 77889999999999999999887 567873222211 1
Q ss_pred cCc-------ccCCh-HHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEe--cCcccccc
Q psy2386 92 GAI-------LMTKP-LLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVH--ARNAFLKK 160 (311)
Q Consensus 92 G~~-------Ll~~~-~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh--~Rt~~~~G 160 (311)
|+. ...+| +.+.++++.+++.. +.++.+.+. + .+-+..+++.|+|+|.+. +.|....+
T Consensus 88 Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~-------t----~~e~~~~~~~G~d~i~~~~~g~t~~~~~ 156 (223)
T 1y0e_A 88 QCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA-------T----VEEAKNAARLGFDYIGTTLHGYTSYTQG 156 (223)
T ss_dssp TCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS-------S----HHHHHHHHHTTCSEEECTTTTSSTTSTT
T ss_pred CCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC-------C----HHHHHHHHHcCCCEEEeCCCcCcCCCCC
Confidence 211 11234 34567777777765 566665432 1 233667899999999763 33321111
Q ss_pred CCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcch
Q psy2386 161 LNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 161 ~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~ 224 (311)
......+++.++++++.+ ++||+++|||.|++++.++++. ||+|++||+++. |+..
T Consensus 157 ------~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~-p~~~ 213 (223)
T 1y0e_A 157 ------QLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR-PKEI 213 (223)
T ss_dssp ------CCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC-HHHH
T ss_pred ------CCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC-cHHH
Confidence 011234789999999998 8999999999999999999987 999999999776 6644
No 65
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.34 E-value=4.1e-12 Score=117.27 Aligned_cols=170 Identities=19% Similarity=0.250 Sum_probs=106.2
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
.+++++. +|.+ .|+.+.+.|+|+|.+. ||.+...+...|+.++++++.+.+|. +.+++||.+|+|.++
T Consensus 22 ~g~i~~~---~~~~---~a~~~~~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I~----~~~~iPv~~k~r~g~ 89 (305)
T 2nv1_A 22 GGVIMDV---INAE---QAKIAEEAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEVM----NAVSIPVMAKARIGH 89 (305)
T ss_dssp TCEEEEE---SSHH---HHHHHHHTTCSEEEEC--CC-------CCCCCCCCCHHHHHHHH----HHCSSCEEEEECTTC
T ss_pred CCeeecC---CHHH---HHHHHHHcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHHH----HhCCCCEEecccccc
Confidence 4577644 5544 5566778899999554 37777777777888999998877764 446899999999854
Q ss_pred CC---------------------CC---cH-------------HHHHHHHHHHHHcCCCEEEEec--------------C
Q psy2386 126 DD---------------------IN---SY-------------DFVRDFVGTVSSAGCRTFIVHA--------------R 154 (311)
Q Consensus 126 ~~---------------------~~---~~-------------~~~~e~~~~l~~~G~~~itvh~--------------R 154 (311)
.+ .+ .. ....+..+. .+.|+++|.++| |
T Consensus 90 ~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a-~~~Gad~V~~~G~~g~g~~~~~~~h~r 168 (305)
T 2nv1_A 90 IVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRR-IAEGASMLRTKGEPGTGNIVEAVRHMR 168 (305)
T ss_dssp HHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHH-HHTTCSEEEECCCTTSCCTHHHHHHHH
T ss_pred hHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHH-HHCCCCEEEeccccCccchHHHHhhhh
Confidence 10 00 00 011232333 366777777743 1
Q ss_pred cc-----ccccCCCCcCCC----CCcCcHHHHHHHHHhCCCCeEE--EecCCCCHHHHHHHHhh-cCEEEEehhhhh--C
Q psy2386 155 NA-----FLKKLNPKQNRK----IPILKYNFVYNLKKDFPELEII--INGGIKTKKEIDLHLNY-IDGVMLGREAYK--N 220 (311)
Q Consensus 155 t~-----~~~G~~g~~~~~----~~~~~~~~i~~i~~~~~~ipvi--~nGgI~s~~da~~~l~~-adgVmigRa~l~--~ 220 (311)
+. ...|+++. ..+ ..+.++++++++++.. ++||+ ++|||.|++|+.++++. ||+|++||+++. |
T Consensus 169 t~~~~i~~l~gi~~~-~~~~~~~~~~~~~~~i~~i~~~~-~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~ 246 (305)
T 2nv1_A 169 KVNAQVRKVVAMSED-ELMTEAKNLGAPYELLLQIKKDG-KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDN 246 (305)
T ss_dssp HHHHHHHHHHHSCGG-GHHHHHHHHTCCHHHHHHHHHHT-SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred hhhccchhhccccch-hhhcccccccccHHHHHHHHHhc-CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCC
Confidence 10 00122111 111 0346899999999987 79999 99999999999999986 999999999996 4
Q ss_pred Cc-chHHhHhh
Q psy2386 221 PF-LMSNFDLN 230 (311)
Q Consensus 221 P~-i~~~~~~~ 230 (311)
|+ ..+++.+.
T Consensus 247 p~~~~~~l~~~ 257 (305)
T 2nv1_A 247 PAKFAKAIVEA 257 (305)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 54 34444443
No 66
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.31 E-value=2.5e-11 Score=119.15 Aligned_cols=135 Identities=14% Similarity=0.155 Sum_probs=99.2
Q ss_pred cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcH
Q psy2386 53 GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 53 ~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~ 131 (311)
.|..++.+..+ +.+.++|+|.|+||..|| +.+.+.++++++++.. ++||.++--.
T Consensus 226 vG~~~d~~~~a-~~l~~aG~d~I~id~a~g---------------~~~~~~~~i~~ir~~~p~~~Vi~g~v~-------- 281 (496)
T 4fxs_A 226 VGAAPGNEERV-KALVEAGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGGNVA-------- 281 (496)
T ss_dssp CCSSSCCHHHH-HHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCCEEEEEEC--------
T ss_pred eccccchHHHH-HHHHhccCceEEeccccc---------------cchHHHHHHHHHHHHCCCceEEEcccC--------
Confidence 35555545444 445567999999999987 3356778899999887 7899884221
Q ss_pred HHHHHHHHHHHHcCCCEEEEe------cCccccccCCCCcCCCCCcCcHHHHHHHHHhCC--CCeEEEecCCCCHHHHHH
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVH------ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP--ELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh------~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~--~ipvi~nGgI~s~~da~~ 203 (311)
..+.++.+.++|+|+|.+- ..+....|. +..++..+.++++.+. ++|||++|||.+++|+.+
T Consensus 282 --t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~--------g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~k 351 (496)
T 4fxs_A 282 --TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGV--------GVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK 351 (496)
T ss_dssp --SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCC--------CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred --cHHHHHHHHHhCCCEEEECCCCCcCcccccccCC--------CccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHH
Confidence 1467899999999999983 222222232 1247777777776321 699999999999999999
Q ss_pred HHhh-cCEEEEehhhhhCC
Q psy2386 204 HLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 204 ~l~~-adgVmigRa~l~~P 221 (311)
+++. ||+||+||++++-.
T Consensus 352 ala~GAd~V~iGs~f~~t~ 370 (496)
T 4fxs_A 352 AIAAGASCVMVGSMFAGTE 370 (496)
T ss_dssp HHHTTCSEEEESTTTTTBT
T ss_pred HHHcCCCeEEecHHHhcCC
Confidence 9987 99999999987644
No 67
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.30 E-value=5.4e-11 Score=112.18 Aligned_cols=181 Identities=17% Similarity=0.228 Sum_probs=121.1
Q ss_pred CCCCHHHHH-HHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccC
Q psy2386 2 NLTDRHCRM-FHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCG 80 (311)
Q Consensus 2 ~~td~~fR~-l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~g 80 (311)
++|+..+.. +++..| .++... ..+.+.+.. .-+.++ .....|+.++++-++ .+.++.+.++|+|.|.||.+
T Consensus 55 ~vt~~~lA~avA~~GG-lgii~~-~~s~e~~~~-~I~~vk-~~~~~pvga~ig~~~----~e~a~~l~eaGad~I~ld~a 126 (361)
T 3khj_A 55 TVTEHLMAVGMARLGG-IGIIHK-NMDMESQVN-EVLKVK-NSGGLRVGAAIGVNE----IERAKLLVEAGVDVIVLDSA 126 (361)
T ss_dssp TTCSHHHHHHHHHTTC-EEEECS-SSCHHHHHH-HHHHHH-HTTCCCCEEEECTTC----HHHHHHHHHTTCSEEEECCS
T ss_pred CCCcHHHHHHHHHcCC-CeEEec-CCCHHHHHH-HHHHHH-hccCceEEEEeCCCH----HHHHHHHHHcCcCeEEEeCC
Confidence 577887776 445544 344432 112222110 001111 123578999997666 45566677889999999955
Q ss_pred CCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecC------
Q psy2386 81 CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHAR------ 154 (311)
Q Consensus 81 CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~R------ 154 (311)
. .+++.+.+.++.+++..++||.++.-. ..+.++.+.++|+|+|.+...
T Consensus 127 ~---------------G~~~~~~~~i~~i~~~~~~~Vivg~v~----------t~e~A~~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 127 H---------------GHSLNIIRTLKEIKSKMNIDVIVGNVV----------TEEATKELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp C---------------CSBHHHHHHHHHHHHHCCCEEEEEEEC----------SHHHHHHHHHTTCSEEEECSSCCTTCC
T ss_pred C---------------CCcHHHHHHHHHHHHhcCCcEEEccCC----------CHHHHHHHHHcCcCEEEEecCCCcCCC
Confidence 3 146777888999988889999885331 146789999999999999311
Q ss_pred ccccccCCCCcCCCCCcCcHHHHHHHH---HhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcch
Q psy2386 155 NAFLKKLNPKQNRKIPILKYNFVYNLK---KDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 155 t~~~~G~~g~~~~~~~~~~~~~i~~i~---~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~ 224 (311)
++...| .+...++.+.+++ +.+ ++|||+.|||.+++|+.+++.. ||+||+|++++..+...
T Consensus 182 tr~~~g--------~g~p~~~~i~~v~~~~~~~-~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp 246 (361)
T 3khj_A 182 TRIVAG--------VGVPQITAIEKCSSVASKF-GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESP 246 (361)
T ss_dssp HHHHTC--------BCCCHHHHHHHHHHHHHHH-TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSS
T ss_pred cccccC--------CCCCcHHHHHHHHHHHhhc-CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCC
Confidence 111111 1123566666664 344 7999999999999999999987 99999999999877543
No 68
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.30 E-value=6.2e-12 Score=112.37 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=84.5
Q ss_pred eEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCC
Q psy2386 117 ITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK 196 (311)
Q Consensus 117 vsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~ 196 (311)
+.||+|- |.+.... ++.++++.+++.|+++|+++..++...+ ...+++.++++++.+ ++||+++|||+
T Consensus 22 ~~v~~~~-~~~~~~~-~~~~~a~~~~~~G~~~i~v~d~~~~~~~---------~~~~~~~i~~i~~~~-~ipvi~~Ggi~ 89 (247)
T 3tdn_A 22 FMVFTYS-GKKNTGI-LLRDWVVEVEKRGAGEILLTSIDRDGTK---------SGYDTEMIRFVRPLT-TLPIIASGGAG 89 (247)
T ss_dssp EEEEETT-TTEEEEE-EHHHHHHHHHHTTCSEEEEEETTTTTCS---------SCCCHHHHHHHGGGC-CSCEEEESCCC
T ss_pred EEEEEcC-CeecCCC-CHHHHHHHHHHcCCCEEEEEecCcccCC---------CcccHHHHHHHHHhC-CCCEEEeCCCC
Confidence 5788884 4443222 4679999999999999999987641111 135899999999998 89999999999
Q ss_pred CHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 197 TKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 197 s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
|++++.++++. ||+|++||+++.||+++.++.+.+
T Consensus 90 ~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~ 125 (247)
T 3tdn_A 90 KMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTF 125 (247)
T ss_dssp SHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHh
Confidence 99999999987 999999999999999998887654
No 69
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.29 E-value=3e-11 Score=118.39 Aligned_cols=139 Identities=12% Similarity=0.172 Sum_probs=101.8
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGID 126 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~ 126 (311)
+.+.+ |.+++.+..+. .+.++|+|.|.||.+|+. ++.+.++++++++.. ++||.++--.
T Consensus 220 v~aav-G~~~~~~~~a~-~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v~--- 279 (490)
T 4avf_A 220 VGAAV-GTGADTGERVA-ALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNIA--- 279 (490)
T ss_dssp CEEEE-CSSTTHHHHHH-HHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEEC---
T ss_pred eeeee-ccccchHHHHH-HHhhcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeeeC---
Confidence 33444 55555555544 455679999999988874 456778899999887 7899885221
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEe------cCccccccCCCCcCCCCCcCcHHHHHHHHHhC--CCCeEEEecCCCCH
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVH------ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF--PELEIIINGGIKTK 198 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh------~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~--~~ipvi~nGgI~s~ 198 (311)
..+.++.+.++|+|+|.+- ..+....|. +..+++.+.++++.+ .++|||+.|||.++
T Consensus 280 -------t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~--------g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~ 344 (490)
T 4avf_A 280 -------TAEAAKALAEAGADAVKVGIGPGSICTTRIVAGV--------GVPQISAIANVAAALEGTGVPLIADGGIRFS 344 (490)
T ss_dssp -------SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCB--------CCCHHHHHHHHHHHHTTTTCCEEEESCCCSH
T ss_pred -------cHHHHHHHHHcCCCEEEECCCCCcCCCccccCCC--------CccHHHHHHHHHHHhccCCCcEEEeCCCCCH
Confidence 1467899999999999982 222111221 234788888887743 16999999999999
Q ss_pred HHHHHHHhh-cCEEEEehhhhhCC
Q psy2386 199 KEIDLHLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 199 ~da~~~l~~-adgVmigRa~l~~P 221 (311)
+|+.++++. ||+||+|++++.-.
T Consensus 345 ~di~kal~~GAd~V~vGs~~~~~~ 368 (490)
T 4avf_A 345 GDLAKAMVAGAYCVMMGSMFAGTE 368 (490)
T ss_dssp HHHHHHHHHTCSEEEECTTTTTBT
T ss_pred HHHHHHHHcCCCeeeecHHHhcCC
Confidence 999999987 99999999997744
No 70
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.29 E-value=2.6e-11 Score=107.31 Aligned_cols=156 Identities=15% Similarity=0.142 Sum_probs=107.5
Q ss_pred CCCeEEEecCCC----HH--HHHHHHHHHHHcCCCEEEec-----------cCCCccccccC------------------
Q psy2386 45 EHPIAFQVGDNE----PK--KLAKSAKIIQKWGYDEINLN-----------CGCPSNRVQNG------------------ 89 (311)
Q Consensus 45 ~~p~~~Ql~g~~----~~--~~~~aa~~~~~~g~d~IdiN-----------~gCP~~~v~~~------------------ 89 (311)
..++++|....+ ++ .+.+.|+.+.+.|+++|.+| .++|.-.+.++
T Consensus 17 ~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~ 96 (234)
T 1yxy_A 17 GIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQ 96 (234)
T ss_dssp SCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEESHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHH
T ss_pred CEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecCCHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHH
Confidence 445666666544 66 77777888888888888887 45665221111
Q ss_pred --cccCcc-------cCCh--HHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEE--EEecCc
Q psy2386 90 --FFGAIL-------MTKP--LLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTF--IVHARN 155 (311)
Q Consensus 90 --~~G~~L-------l~~~--~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~i--tvh~Rt 155 (311)
..|+.. ..+| +.+.++++.+++.. +.++.+.++. .+-+..+.++|+|+| ++++.+
T Consensus 97 ~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----------~~ea~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 97 LAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIST-----------FDEGLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp HHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----------HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----------HHHHHHHHHcCCCEEeeeccccC
Confidence 122211 1223 24567788887765 6666664431 233778889999999 787765
Q ss_pred cccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 156 AFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 156 ~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
...+++ .+.+++.++++++. ++||++.|||+|++++.++++. ||+|++||+++. |+
T Consensus 166 ~~~~~~--------~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~-p~ 222 (234)
T 1yxy_A 166 PYSRQE--------AGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR-PK 222 (234)
T ss_dssp TTSCCS--------SSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC-HH
T ss_pred CCCcCC--------CCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC-hH
Confidence 311111 23589999999886 6999999999999999999987 999999999987 64
No 71
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.28 E-value=3.5e-11 Score=118.63 Aligned_cols=142 Identities=13% Similarity=0.119 Sum_probs=103.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~ 132 (311)
|.+++.+. .++.+.++|+|.|+||.+|. +++...++++++++.+ ++||.+|-= .
T Consensus 251 G~~~~~~~-~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~v------~--- 305 (514)
T 1jcn_A 251 GTREDDKY-RLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGNV------V--- 305 (514)
T ss_dssp CSSTTHHH-HHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEEE------C---
T ss_pred cCchhhHH-HHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEeccc------c---
Confidence 44555444 45557779999999998873 2366778999999988 899988611 1
Q ss_pred HHHHHHHHHHHcCCCEEEEe---cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-c
Q psy2386 133 FVRDFVGTVSSAGCRTFIVH---ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-I 208 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh---~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-a 208 (311)
..+.++.+.++|+|+|.+. |.+.+.....+. ....+..+..+.++++.+ ++|||+.|||++++|+.+++.. |
T Consensus 306 -t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~--g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GA 381 (514)
T 1jcn_A 306 -TAAQAKNLIDAGVDGLRVGMGCGSICITQEVMAC--GRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGA 381 (514)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSC--CCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTC
T ss_pred -hHHHHHHHHHcCCCEEEECCCCCcccccccccCC--CccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCC
Confidence 1467899999999999882 111110000000 000123578888998887 8999999999999999999987 9
Q ss_pred CEEEEehhhhhCCcch
Q psy2386 209 DGVMLGREAYKNPFLM 224 (311)
Q Consensus 209 dgVmigRa~l~~P~i~ 224 (311)
|+||+||+++..|+..
T Consensus 382 d~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 382 STVMMGSLLAATTEAP 397 (514)
T ss_dssp SEEEESTTTTTSTTSS
T ss_pred CeeeECHHHHcCCcCC
Confidence 9999999999988644
No 72
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.25 E-value=1.7e-10 Score=108.35 Aligned_cols=177 Identities=15% Similarity=0.153 Sum_probs=120.4
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecceecccccCCchhccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCC
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGC 81 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv~a~~l~~~~~~~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gC 81 (311)
.+|+..+...+.+.|.. -+.+.+.+.+.+.. ..+ ....++.+.+ |. ++...+.++.+.++|+|.|.|+..+
T Consensus 52 ~vte~~lA~A~a~~Gg~-gvi~~~~s~ee~~~----~i~--~~~~~~~~~~-g~-~~~~~e~~~~a~~aGvdvI~id~a~ 122 (361)
T 3r2g_A 52 TITESNMANFMHSKGAM-GALHRFMTIEENIQ----EFK--KCKGPVFVSV-GC-TENELQRAEALRDAGADFFCVDVAH 122 (361)
T ss_dssp TTCSHHHHHHHHHTTCE-EBCCSCSCHHHHHH----HHH--TCCSCCBEEE-CS-SHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CchHHHHHHHHHHcCCC-EEEeCCCCHHHHHH----HHh--hcceEEEEEc-CC-CHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 46888999988888842 33444444444320 010 0012334444 33 3455667888888999999998655
Q ss_pred CccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEE--ecCcc-c
Q psy2386 82 PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV--HARNA-F 157 (311)
Q Consensus 82 P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itv--h~Rt~-~ 157 (311)
.. ++.+.++++.+++.. ++||.+|--. ..+-++.+.++|+|+|.| |+... .
T Consensus 123 G~---------------~~~~~e~I~~ir~~~~~~~Vi~G~V~----------T~e~A~~a~~aGaD~I~Vg~g~G~~~~ 177 (361)
T 3r2g_A 123 AH---------------AKYVGKTLKSLRQLLGSRCIMAGNVA----------TYAGADYLASCGADIIKAGIGGGSVCS 177 (361)
T ss_dssp CS---------------SHHHHHHHHHHHHHHTTCEEEEEEEC----------SHHHHHHHHHTTCSEEEECCSSSSCHH
T ss_pred CC---------------cHhHHHHHHHHHHhcCCCeEEEcCcC----------CHHHHHHHHHcCCCEEEEcCCCCcCcc
Confidence 32 245678899999876 7899987221 146689999999999998 33211 0
Q ss_pred ---cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 158 ---LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 158 ---~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
..|. +...++.|.++++.. . |||+.|||.++.|+.++++. ||+||+||+++....
T Consensus 178 tr~~~g~--------g~p~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 178 TRIKTGF--------GVPMLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp HHHHHCC--------CCCHHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTT
T ss_pred ccccCCc--------cHHHHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcc
Confidence 1111 113677788887765 4 99999999999999999987 999999999987753
No 73
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.24 E-value=2.5e-10 Score=101.97 Aligned_cols=156 Identities=12% Similarity=0.257 Sum_probs=111.8
Q ss_pred CCeEEEecCC--CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc-ccceeEEEEe
Q psy2386 46 HPIAFQVGDN--EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEIDITVKHR 122 (311)
Q Consensus 46 ~p~~~Ql~g~--~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~-~~~pvsvKiR 122 (311)
.++-+|++|- +.++ ++.+-+.|+|-|-|| ++..++|+++.++.+..-.. +-+-+.+|.+
T Consensus 74 ~~~pl~vGGGIrs~e~----~~~~l~~GadkVii~--------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~ 135 (243)
T 4gj1_A 74 VSVNLQVGGGIRSKEE----VKALLDCGVKRVVIG--------------SMAIKDATLCLEILKEFGSEAIVLALDTILK 135 (243)
T ss_dssp CCSEEEEESSCCCHHH----HHHHHHTTCSEEEEC--------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEES
T ss_pred cCCCeEeccccccHHH----HHHHHHcCCCEEEEc--------------cccccCCchHHHHHhcccCceEEEEEEEEeC
Confidence 4566888874 4443 344557899999886 67789999999999887543 2223333322
Q ss_pred -------ccCCCCCcHHHHHHHHHHHHHcCCCEEEEec--CccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 123 -------IGIDDINSYDFVRDFVGTVSSAGCRTFIVHA--RNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 123 -------~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~--Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
-||...... .+.++++.+++.|+..|.++. |..+.+| .|.+.++++++.++++|||++|
T Consensus 136 ~~~~v~~~gw~~~~~~-~~~~~~~~~~~~g~~eil~t~Id~DGt~~G-----------~d~~l~~~l~~~~~~ipviasG 203 (243)
T 4gj1_A 136 EDYVVAVNAWQEASDK-KLMEVLDFYSNKGLKHILCTDISKDGTMQG-----------VNVRLYKLIHEIFPNICIQASG 203 (243)
T ss_dssp SSEEEC--------CC-BHHHHHHHHHTTTCCEEEEEETTC-----C-----------CCHHHHHHHHHHCTTSEEEEES
T ss_pred CCCEEEecCceecccc-hHHHHHHHHhhcCCcEEEeeeecccccccC-----------CCHHHHHHHHHhcCCCCEEEEc
Confidence 145443332 467999999999999999984 4444455 4899999999987679999999
Q ss_pred CCCCHHHHHHHHhhcCEEEEehhhhhCCcchHHhHhhh
Q psy2386 194 GIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 194 gI~s~~da~~~l~~adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
|+.|.+|+.++...++||.+|++++.+-.-++++.+.+
T Consensus 204 Gv~~~~Dl~~l~~~~~gvivg~Al~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 204 GVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIRCL 241 (243)
T ss_dssp CCCSHHHHHHTTTTCSEEEECHHHHTTSSCHHHHHHHH
T ss_pred CCCCHHHHHHHHccCchhehHHHHHCCCCCHHHHHHHh
Confidence 99999999886444999999999999888888877654
No 74
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.24 E-value=6.3e-11 Score=104.94 Aligned_cols=123 Identities=11% Similarity=0.034 Sum_probs=94.1
Q ss_pred HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHc
Q psy2386 65 KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSA 144 (311)
Q Consensus 65 ~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~ 144 (311)
..+.++|+|.|-++..+ ..+|+.+.++++.+++. +.++.+.+.. .+.++.+++.
T Consensus 95 ~~~~~aGad~I~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~t-----------~eea~~a~~~ 148 (229)
T 3q58_A 95 DALAQAGADIIAFDASF--------------RSRPVDIDSLLTRIRLH-GLLAMADCST-----------VNEGISCHQK 148 (229)
T ss_dssp HHHHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECSS-----------HHHHHHHHHT
T ss_pred HHHHHcCCCEEEECccc--------------cCChHHHHHHHHHHHHC-CCEEEEecCC-----------HHHHHHHHhC
Confidence 34567899999887443 24567788899998874 7888876532 4678889999
Q ss_pred CCCEEEE--ecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCC
Q psy2386 145 GCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 145 G~~~itv--h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P 221 (311)
|+|+|.+ ||.|.. + .....+|+.++++++. ++|||++|||.|++|+.++++. ||+|++|++++ +|
T Consensus 149 Gad~Ig~~~~g~t~~--~-------~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~-~p 216 (229)
T 3q58_A 149 GIEFIGTTLSGYTGP--I-------TPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAIT-RI 216 (229)
T ss_dssp TCSEEECTTTTSSSS--C-------CCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH-CH
T ss_pred CCCEEEecCccCCCC--C-------cCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhc-Ch
Confidence 9999954 555431 1 1223589999999875 7999999999999999999987 99999997776 57
Q ss_pred cchH
Q psy2386 222 FLMS 225 (311)
Q Consensus 222 ~i~~ 225 (311)
|.+.
T Consensus 217 ~~~~ 220 (229)
T 3q58_A 217 EHIC 220 (229)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 75
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.21 E-value=1.2e-10 Score=103.40 Aligned_cols=122 Identities=11% Similarity=0.054 Sum_probs=93.5
Q ss_pred HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHc
Q psy2386 65 KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSA 144 (311)
Q Consensus 65 ~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~ 144 (311)
+.+.++|+|.|=++..+ ..+|+.+.++++.+++. ++++.+.+.. .+.++.+++.
T Consensus 95 ~~~~~~Gad~V~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~t-----------~eea~~a~~~ 148 (232)
T 3igs_A 95 DALAQAGAAIIAVDGTA--------------RQRPVAVEALLARIHHH-HLLTMADCSS-----------VDDGLACQRL 148 (232)
T ss_dssp HHHHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECCS-----------HHHHHHHHHT
T ss_pred HHHHHcCCCEEEECccc--------------cCCHHHHHHHHHHHHHC-CCEEEEeCCC-----------HHHHHHHHhC
Confidence 34567899999887432 34667788899998874 7888876532 4668889999
Q ss_pred CCCEEEE--ecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCC
Q psy2386 145 GCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 145 G~~~itv--h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P 221 (311)
|+|+|.+ |++|.. + .....+|+.++++++. ++|||++|||.|++|+.++++. ||||+||++++ +|
T Consensus 149 Gad~Ig~~~~g~t~~--~-------~~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~-~p 216 (232)
T 3igs_A 149 GADIIGTTMSGYTTP--D-------TPEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT-RL 216 (232)
T ss_dssp TCSEEECTTTTSSSS--S-------CCSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH-CH
T ss_pred CCCEEEEcCccCCCC--C-------CCCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc-CH
Confidence 9999964 455431 1 0123589999999986 7999999999999999999987 99999998877 57
Q ss_pred cch
Q psy2386 222 FLM 224 (311)
Q Consensus 222 ~i~ 224 (311)
+..
T Consensus 217 ~~~ 219 (232)
T 3igs_A 217 EHI 219 (232)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 76
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.21 E-value=1.3e-10 Score=109.42 Aligned_cols=151 Identities=10% Similarity=0.009 Sum_probs=124.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-..++-.+|+.|+++|+.+.+.||+.|+|++||+ +++...++++++|+++ ++++.++.+
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34555454336899999999999999999999999883 4677889999999987 689999998
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+. ++..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++++.+.|++++.
T Consensus 198 ~~~~~----~~a~~~~~~l~~~~i~~iE--------~P--------~~~~~~~~~~~l~~~~-~iPI~~de~~~~~~~~~ 256 (359)
T 1mdl_A 198 QSLDV----PAAIKRSQALQQEGVTWIE--------EP--------TLQHDYEGHQRIQSKL-NVPVQMGENWLGPEEMF 256 (359)
T ss_dssp TCSCH----HHHHHHHHHHHHHTCSCEE--------CC--------SCTTCHHHHHHHHHTC-SSCEEECTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHHHhCCCeEE--------CC--------CChhhHHHHHHHHHhC-CCCEEeCCCCCCHHHHH
Confidence 88864 3578999999999999872 11 1235899999999998 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
++++. ||+|++-.+-.+..+-+.++.+..
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A 287 (359)
T 1mdl_A 257 KALSIGACRLAMPDAMKIGGVTGWIRASALA 287 (359)
T ss_dssp HHHHTTCCSEECCBTTTTTHHHHHHHHHHHH
T ss_pred HHHHcCCCCEEeecchhhCCHHHHHHHHHHH
Confidence 99976 999999998888887777765543
No 77
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=99.20 E-value=1.3e-10 Score=106.49 Aligned_cols=196 Identities=11% Similarity=0.095 Sum_probs=135.1
Q ss_pred CHHHHHHHHHhCCCcEEEecc-eec--cccc--CC-c-hhcccc-----CCCCCCeEEEe---cCCCHHHHHHHHHHHHH
Q psy2386 5 DRHCRMFHRQITRYSWLYTEM-FTT--QAIL--GN-K-KHCLDF-----NAEEHPIAFQV---GDNEPKKLAKSAKIIQK 69 (311)
Q Consensus 5 d~~fR~l~~~~g~~~l~~tem-v~a--~~l~--~~-~-~~~l~~-----~~~~~p~~~Ql---~g~~~~~~~~aa~~~~~ 69 (311)
|..+=+++.+.|-..+..|-- ++. .+.- +. + ..++.. ...+.|+++.+ +|.+|+...+.++.+.+
T Consensus 26 D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~ 105 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIK 105 (295)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHH
Confidence 555666676777444555554 332 2221 10 1 112111 12347999999 88899999999999999
Q ss_pred cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEE
Q psy2386 70 WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTF 149 (311)
Q Consensus 70 ~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~i 149 (311)
+|+++|.|+-+| .++++....|..|....+.+.+|..++....+.++.|.-|..-......++.++-++.++++|+|.|
T Consensus 106 aGa~gv~iEd~~-~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i 184 (295)
T 1xg4_A 106 AGAAGLHIEDQV-GAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEML 184 (295)
T ss_dssp HTCSEEEEECBC-SSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred cCCeEEEECCCC-CCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 999999999999 4555554445667766666666666665555778889989742211223568899999999999999
Q ss_pred EEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC--CCHHHHHHHHh-h-cCEEEEehhhhh
Q psy2386 150 IVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI--KTKKEIDLHLN-Y-IDGVMLGREAYK 219 (311)
Q Consensus 150 tvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI--~s~~da~~~l~-~-adgVmigRa~l~ 219 (311)
.+|+.+ +++.++++.+.+ ++|+++|... .++..-.+-|. . ++.|++|.+++.
T Consensus 185 ~~e~~~-----------------~~~~~~~i~~~~-~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~ 240 (295)
T 1xg4_A 185 FPEAIT-----------------ELAMYRQFADAV-QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR 240 (295)
T ss_dssp EETTCC-----------------SHHHHHHHHHHH-CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH
T ss_pred EEeCCC-----------------CHHHHHHHHHHc-CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH
Confidence 999873 688999999998 7999998865 33332223333 3 999999988764
No 78
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.20 E-value=2e-10 Score=103.87 Aligned_cols=155 Identities=12% Similarity=0.151 Sum_probs=109.0
Q ss_pred CCCeEEEecCCC-----H--HHHHHHHHHHHHcCCCEE--EeccCCCccccccCcccCcccCChHHHHHHHHHHhccccc
Q psy2386 45 EHPIAFQVGDNE-----P--KKLAKSAKIIQKWGYDEI--NLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI 115 (311)
Q Consensus 45 ~~p~~~Ql~g~~-----~--~~~~~aa~~~~~~g~d~I--diN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~ 115 (311)
+.|+++|+.+.+ + +.+.+.++.+.+.|+|.| .+|.||+... ...+.+.++++.+++ .++
T Consensus 79 ~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~~-----------~~~~~~~~v~~~~~~-~g~ 146 (273)
T 2qjg_A 79 DVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDW-----------EAYRDLGMIAETCEY-WGM 146 (273)
T ss_dssp CCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEETSTTHH-----------HHHHHHHHHHHHHHH-HTC
T ss_pred CCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecCCCCHH-----------HHHHHHHHHHHHHHH-cCC
Confidence 578999997655 2 123455666778899999 8888887321 112445566666554 488
Q ss_pred eeEEEEec-cCC--CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe
Q psy2386 116 DITVKHRI-GID--DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 192 (311)
Q Consensus 116 pvsvKiR~-g~~--~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n 192 (311)
|+.+.+-. |+. ...+.+...+.++.+++.|+|+|.++. +.+|+.++++++.+ ++||++.
T Consensus 147 ~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~-----------------~~~~~~l~~i~~~~-~ipvva~ 208 (273)
T 2qjg_A 147 PLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY-----------------TGDIDSFRDVVKGC-PAPVVVA 208 (273)
T ss_dssp CEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC-----------------CSSHHHHHHHHHHC-SSCEEEE
T ss_pred CEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC-----------------CCCHHHHHHHHHhC-CCCEEEE
Confidence 98887521 221 011122345666889999999998872 14899999999988 7999999
Q ss_pred cCCCC--HHHHHHHH----hh-cCEEEEehhhhhCCcchHHhHh
Q psy2386 193 GGIKT--KKEIDLHL----NY-IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 193 GgI~s--~~da~~~l----~~-adgVmigRa~l~~P~i~~~~~~ 229 (311)
|||.+ .+|+.+++ +. |+||++||+++..||....+.+
T Consensus 209 GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~ 252 (273)
T 2qjg_A 209 GGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRA 252 (273)
T ss_dssp CCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHH
Confidence 99995 88866554 34 9999999999999987765543
No 79
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.17 E-value=1.7e-10 Score=109.04 Aligned_cols=140 Identities=9% Similarity=-0.022 Sum_probs=119.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
++++++++|+.+.+.||+.|.|++||+ +++...++++++|+++ ++++.|+.+-+|+. ++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~----~~ 206 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTV----DG 206 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----HH
Confidence 899999999999999999999999984 4677889999999987 68999999888864 35
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 211 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgV 211 (311)
..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++++.+.|++++.++++. ||.|
T Consensus 207 a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v 269 (371)
T 2ovl_A 207 AIRAARALAPFDLHWIE--------EP--------TIPDDLVGNARIVRES-GHTIAGGENLHTLYDFHNAVRAGSLTLP 269 (371)
T ss_dssp HHHHHHHHGGGCCSEEE--------CC--------SCTTCHHHHHHHHHHH-CSCEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred HHHHHHHHHhcCCCEEE--------CC--------CCcccHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 78999999999999872 11 1235899999999988 7999999999999999999976 9999
Q ss_pred EEehhhhhCCcchHHhHhhh
Q psy2386 212 MLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 212 migRa~l~~P~i~~~~~~~~ 231 (311)
++-.+-.+.++-+.++.+..
T Consensus 270 ~ik~~~~GGi~~~~~i~~~A 289 (371)
T 2ovl_A 270 EPDVSNIGGYTTFRKVAALA 289 (371)
T ss_dssp CCCTTTTTSHHHHHHHHHHH
T ss_pred eeCccccCCHHHHHHHHHHH
Confidence 99999999988777776543
No 80
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.17 E-value=3e-10 Score=107.69 Aligned_cols=146 Identities=8% Similarity=-0.031 Sum_probs=121.4
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-..++..+|+.++++|+.+.+.||+.|+|++|| +++...++++++|+++ ++|+.++.+
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan 197 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADAN 197 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECT
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 3455555544789999999999999999999999887 4688889999999998 589999988
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+. ++..++++.+++.|+ +|. + . . + ||+..+++++.+ ++||++++.+.+++++.
T Consensus 198 ~~~~~----~~a~~~~~~l~~~~i-~iE--------~-------P-~-~-~~~~~~~l~~~~-~iPI~~de~i~~~~~~~ 253 (379)
T 2rdx_A 198 QGWRV----DNAIRLARATRDLDY-ILE--------Q-------P-C-R-SYEECQQVRRVA-DQPMKLDECVTGLHMAQ 253 (379)
T ss_dssp TCSCH----HHHHHHHHHTTTSCC-EEE--------C-------C-S-S-SHHHHHHHHTTC-CSCEEECTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHHhCCe-EEe--------C-------C-c-C-CHHHHHHHHhhC-CCCEEEeCCcCCHHHHH
Confidence 88864 356899999999999 762 1 1 1 1 899999999988 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
++++. ||.|++-.+-.+.++-+.++.+.
T Consensus 254 ~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 283 (379)
T 2rdx_A 254 RIVADRGAEICCLKISNLGGLSKARRTRDF 283 (379)
T ss_dssp HHHHHTCCSEEEEETTTTTSHHHHHHHHHH
T ss_pred HHHHcCCCCEEEEeccccCCHHHHHHHHHH
Confidence 99976 99999999988888777666543
No 81
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=99.15 E-value=3.3e-10 Score=107.50 Aligned_cols=148 Identities=9% Similarity=-0.000 Sum_probs=126.6
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
+..|+-.++++.+|+.+++.++.+.+.||+.|.|++|| +++.-.+++++||+++ ++++.|+.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vDa 196 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYDV 196 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEEC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 45677888999999999999998888999999999987 3667788999999988 68999999
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
+-+|+.. +..++++.+++.|+ +|. + |..+|+..+++++.. ++||++++.+.|++|+
T Consensus 197 n~~~~~~----~a~~~~~~l~~~~i-~iE---------------q---P~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 252 (378)
T 3eez_A 197 NRGWTRQ----QALRVMRATEDLHV-MFE---------------Q---PGETLDDIAAIRPLH-SAPVSVDECLVTLQDA 252 (378)
T ss_dssp TTCCCHH----HHHHHHHHTGGGTC-CEE---------------C---CSSSHHHHHHTGGGC-CCCEEECTTCCSHHHH
T ss_pred CCCCCHH----HHHHHHHHhccCCe-EEe---------------c---CCCCHHHHHHHHhhC-CCCEEECCCCCCHHHH
Confidence 9999753 46789999999988 772 1 112899999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
.++++. ||.|++-.+-.+.++-+.++.+..
T Consensus 253 ~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A 284 (378)
T 3eez_A 253 ARVARDGLAEVFGIKLNRVGGLTRAARMRDIA 284 (378)
T ss_dssp HHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEeCchhcCCHHHHHHHHHHH
Confidence 999975 999999999999999887776543
No 82
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.14 E-value=4.7e-10 Score=105.91 Aligned_cols=149 Identities=15% Similarity=0.249 Sum_probs=124.9
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-.++++.+|+++.++|+.+.+.||+.|.|++|+ +++...++++++|+++ ++++.++.+
T Consensus 130 ~v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 193 (369)
T 2p8b_A 130 EFPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVN 193 (369)
T ss_dssp CEECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred ceeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 4556678888899999999999999999999999874 4788889999999987 688999988
Q ss_pred ccCCCCCcHHHHH-HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 123 IGIDDINSYDFVR-DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 123 ~g~~~~~~~~~~~-e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
-+|+.. +.. ++++.+++.|+++|. +- .++.||+..+++++.+ ++||++++.+.+++++
T Consensus 194 ~~~~~~----~a~~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~ 252 (369)
T 2p8b_A 194 QGWKNS----ANTLTALRSLGHLNIDWIE--------QP--------VIADDIDAMAHIRSKT-DLPLMIDEGLKSSREM 252 (369)
T ss_dssp TTTBSH----HHHHHHHHTSTTSCCSCEE--------CC--------BCTTCHHHHHHHHHTC-CSCEEESTTCCSHHHH
T ss_pred CCCCHH----HHHHHHHHHHHhCCCcEEE--------CC--------CCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHH
Confidence 888653 467 899999999999873 11 1345899999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
.++++. ||+|++-.+-.+..+-+.++.+.
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 283 (369)
T 2p8b_A 253 RQIIKLEAADKVNIKLMKCGGIYPAVKLAHQ 283 (369)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEeecchhCCHHHHHHHHHH
Confidence 999975 99999999888888767666543
No 83
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.13 E-value=4.2e-10 Score=107.07 Aligned_cols=146 Identities=10% Similarity=0.042 Sum_probs=120.7
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 46 HPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 46 ~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
.|+-..++ ..++++|+++|+.+.+.||+.|+|++|| .+++. .++++++|+++ ++++.++..
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 45555554 3689999999999999999999999886 24677 89999999987 689999998
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+. ++..++++.+++.|+++|. +- .++.||+..+++++.+ ++||++.+.+.|++++.
T Consensus 217 ~~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~ 275 (388)
T 2nql_A 217 WNQTP----ERALELIAEMQPFDPWFAE--------AP--------VWTEDIAGLEKVSKNT-DVPIAVGEEWRTHWDMR 275 (388)
T ss_dssp SCSCH----HHHHHHHHHHGGGCCSCEE--------CC--------SCTTCHHHHHHHHTSC-CSCEEECTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCCCEEE--------CC--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHH
Confidence 88864 3578999999999999872 11 1235899999999988 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
++++. ||+|++-.+- +.++-+.++.+
T Consensus 276 ~~i~~~~~d~v~ik~~~-GGit~~~~i~~ 303 (388)
T 2nql_A 276 ARIERCRIAIVQPEMGH-KGITNFIRIGA 303 (388)
T ss_dssp HHHTTSCCSEECCCHHH-HCHHHHHHHHH
T ss_pred HHHHcCCCCEEEecCCC-CCHHHHHHHHH
Confidence 99976 9999998888 88876666654
No 84
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.13 E-value=9.5e-11 Score=104.22 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=84.1
Q ss_pred eEEEEeccCCCCCc--HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 117 ITVKHRIGIDDINS--YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 117 vsvKiR~g~~~~~~--~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
..||+|.||..... ..++.++++.+++.|++.|++|.++.. ... ...+++.+++++ .+ ++||+++||
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~-~~~--------~~~~~~~i~~i~-~~-~ipvi~~Gg 81 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNA-IEN--------SGENLPVLEKLS-EF-AEHIQIGGG 81 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHH-HHC--------CCTTHHHHHHGG-GG-GGGEEEESS
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEeccccc-ccC--------CchhHHHHHHHH-hc-CCcEEEECC
Confidence 57899999865431 124689999999999999999987641 111 125799999999 76 799999999
Q ss_pred CCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhh
Q psy2386 195 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 195 I~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~ 230 (311)
|++++++.++++. ||+|++|++++.+|+++.++ +.
T Consensus 82 i~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~ 117 (241)
T 1qo2_A 82 IRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-RE 117 (241)
T ss_dssp CCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HT
T ss_pred CCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HH
Confidence 9999999999987 99999999999999999988 54
No 85
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.13 E-value=4.8e-10 Score=106.26 Aligned_cols=147 Identities=10% Similarity=0.062 Sum_probs=122.0
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
+..|+-..+...+|+.+.++|+.+.+.||+.|.|++||| +++...++++++|+++ ++++.++.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (378)
T 2qdd_A 133 TPVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDV 197 (378)
T ss_dssp CCEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEEC
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 345666667668999999999999889999999999986 5688889999999987 68899998
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
+-+|+. ++..++++.++ .|+ +|- +.. + ||+..+++++.+ ++||++++.+.|++++
T Consensus 198 n~~~~~----~~a~~~~~~l~-~~i-~iE---------------qP~--~-d~~~~~~l~~~~-~iPI~~dE~~~~~~~~ 252 (378)
T 2qdd_A 198 NRAWTP----AIAVEVLNSVR-ARD-WIE---------------QPC--Q-TLDQCAHVARRV-ANPIMLDECLHEFSDH 252 (378)
T ss_dssp TTCCCH----HHHHHHHTSCC-CCC-EEE---------------CCS--S-SHHHHHHHHTTC-CSCEEECTTCCSHHHH
T ss_pred CCCCCH----HHHHHHHHHhC-CCc-EEE---------------cCC--C-CHHHHHHHHHhC-CCCEEECCCcCCHHHH
Confidence 888864 35678898888 888 651 111 1 899999999988 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
.++++. ||.|++-.+-.+.++-+.++.+.
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~ 283 (378)
T 2qdd_A 253 LAAWSRGACEGVKIKPNRVGGLTRARQIRDF 283 (378)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEecccccCCHHHHHHHHHH
Confidence 999975 99999999999999877766543
No 86
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.13 E-value=7.4e-10 Score=105.57 Aligned_cols=193 Identities=13% Similarity=0.138 Sum_probs=122.6
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecceeccccc-CC--------chh-------------c------------cc-cCCCCC
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMFTTQAIL-GN--------KKH-------------C------------LD-FNAEEH 46 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv~a~~l~-~~--------~~~-------------~------------l~-~~~~~~ 46 (311)
|+|+..+.+.+.+.|..+++.|||+.++... .. ... + ++ ..+...
T Consensus 77 g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~ 156 (393)
T 2qr6_A 77 ALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGE 156 (393)
T ss_dssp TTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTS
T ss_pred CcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCC
Confidence 6788888888888887789999885432211 00 000 0 00 012356
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCC
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 126 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~ 126 (311)
|+++.+.+.+..++ ++.+.+.|+|.|.++ +.|.. ..++..-. +++ + +..+++.+++||.+| |..
T Consensus 157 ~v~~~v~~~~~~e~---a~~~~~agad~i~i~-~~~~~----~~~~~~~~-~~~---~-i~~l~~~~~~pvi~g---gi~ 220 (393)
T 2qr6_A 157 IVAVRVSPQNVREI---APIVIKAGADLLVIQ-GTLIS----AEHVNTGG-EAL---N-LKEFIGSLDVPVIAG---GVN 220 (393)
T ss_dssp CCEEEECTTTHHHH---HHHHHHTTCSEEEEE-CSSCC----SSCCCC---------C-HHHHHHHCSSCEEEE---CCC
T ss_pred eEEEEeCCccHHHH---HHHHHHCCCCEEEEe-CCccc----cccCCCcc-cHH---H-HHHHHHhcCCCEEEC---CcC
Confidence 88888887665544 344557899999887 34421 01211100 122 2 456666679999996 221
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh-------CC--CCeEEEecCCCC
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-------FP--ELEIIINGGIKT 197 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~-------~~--~ipvi~nGgI~s 197 (311)
. .+-++.+.++|+|+|.| ++.. ..+......++..++.+.++++. +. ++|||++|||++
T Consensus 221 t-------~e~a~~~~~~Gad~i~v-g~Gg----~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~ 288 (393)
T 2qr6_A 221 D-------YTTALHMMRTGAVGIIV-GGGE----NTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIEN 288 (393)
T ss_dssp S-------HHHHHHHHTTTCSEEEE-SCCS----CCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCS
T ss_pred C-------HHHHHHHHHcCCCEEEE-CCCc----ccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCC
Confidence 1 35578889999999999 5411 00000011123567888777765 42 299999999999
Q ss_pred HHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 198 KKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 198 ~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
.+|+.+++.. ||+||+||+++..+.
T Consensus 289 ~~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 289 SGDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred HHHHHHHHHcCCCEEEECHHHHcCCC
Confidence 9999999987 999999999988875
No 87
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.09 E-value=1.6e-09 Score=103.53 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=123.1
Q ss_pred CCCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCCh-HHHHHHHHHHhccc--cceeEEE
Q psy2386 45 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKP-LLVSDCIKAMRDSV--EIDITVK 120 (311)
Q Consensus 45 ~~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~-~~~~~iv~~v~~~~--~~pvsvK 120 (311)
..|+-.++. +.+++++.++|+.+.+.||+.|.|++ ||. |. ++ +...++++++|+++ ++++.++
T Consensus 133 ~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~vD 199 (401)
T 2hzg_A 133 GKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMVD 199 (401)
T ss_dssp CBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 445554554 67999999999999999999999996 764 32 45 77889999999987 6899999
Q ss_pred EeccC--CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHH-hCCCCeEEEecCCCC
Q psy2386 121 HRIGI--DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK-DFPELEIIINGGIKT 197 (311)
Q Consensus 121 iR~g~--~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~-~~~~ipvi~nGgI~s 197 (311)
..-+| +. ++..++++.+++.|+++|- +. .++.||+..+++++ .+ ++||++.+.+.|
T Consensus 200 an~~~~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~~-~iPI~~dE~~~~ 258 (401)
T 2hzg_A 200 VGQIFGEDV----EAAAARLPTLDAAGVLWLE--------EP--------FDAGALAAHAALAGRGA-RVRIAGGEAAHN 258 (401)
T ss_dssp CTTTTTTCH----HHHHTTHHHHHHTTCSEEE--------CC--------SCTTCHHHHHHHHTTCC-SSEEEECTTCSS
T ss_pred CCCCCCCCH----HHHHHHHHHHHhcCCCEEE--------CC--------CCccCHHHHHHHHhhCC-CCCEEecCCcCC
Confidence 98888 54 3568899999999999872 11 12358999999998 87 799999999999
Q ss_pred HHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 198 KKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 198 ~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
++++.++++. ||.|++-.+-.+.++-+.++.+
T Consensus 259 ~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 292 (401)
T 2hzg_A 259 FHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVAD 292 (401)
T ss_dssp HHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHH
Confidence 9999999976 9999999888888876666544
No 88
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.08 E-value=2.4e-09 Score=95.40 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=115.2
Q ss_pred CCeEEEecCCCH--HHHHHHHHHHHHcCCCEEEec--cCCCccccccCc--ccCcc--cCChHHHHHHHHHHhcccccee
Q psy2386 46 HPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLN--CGCPSNRVQNGF--FGAIL--MTKPLLVSDCIKAMRDSVEIDI 117 (311)
Q Consensus 46 ~p~~~Ql~g~~~--~~~~~aa~~~~~~g~d~IdiN--~gCP~~~v~~~~--~G~~L--l~~~~~~~~iv~~v~~~~~~pv 117 (311)
.++++.|.+.|| +.+.+.++.+++. +|.|+|+ ++||.-.-..-. .-.+| -.+.....++++++++.+++||
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv 83 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPI 83 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCE
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCE
Confidence 468999999999 5899999999888 9999999 678754100000 00000 0266777899999999888998
Q ss_pred EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc--------------------------------cc-------
Q psy2386 118 TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------------------------------FL------- 158 (311)
Q Consensus 118 svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~--------------------------------~~------- 158 (311)
-+......... + ...++++.+.++|++.|++|.-.. ..
T Consensus 84 ~~~~~~~~~~~--~-~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i 160 (248)
T 1geq_A 84 VLMTYYNPIYR--A-GVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFV 160 (248)
T ss_dssp EEEECHHHHHH--H-CHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEE
T ss_pred EEEeccchhhh--c-CHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeE
Confidence 87653210000 0 124788888999999999874110 00
Q ss_pred -----ccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC
Q psy2386 159 -----KKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN 220 (311)
Q Consensus 159 -----~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~ 220 (311)
.|++|... ..++..++.++++++.. ++||++.|||++++++.++++. +|+|.+|++++..
T Consensus 161 ~~~~~~G~~g~~~-~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 161 YLVSLYGTTGARE-EIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp EEECCC--------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred EEEECCccCCCCC-CCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 01111100 01123467899999987 7999999999999999999876 9999999999764
No 89
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.07 E-value=1.9e-09 Score=105.70 Aligned_cols=132 Identities=15% Similarity=0.218 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHH
Q psy2386 58 KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRD 136 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e 136 (311)
..+.+.++.+.++|+|.|.+|++. | +++...++++++++.+ ++||.++--. ..+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~~----------t~e 290 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH----------G-----HSRRVIETLEMIKADYPDLPVVAGNVA----------TPE 290 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEEC----------SHH
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC----------C-----chHHHHHHHHHHHHHCCCceEEeCCcC----------CHH
Confidence 345567778888999999998641 1 3466778899999988 7999885221 135
Q ss_pred HHHHHHHcCCCEEEEecCc------cccccCCCCcCCCCCcCcHHHHHHHHH---hCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 137 FVGTVSSAGCRTFIVHARN------AFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 137 ~~~~l~~~G~~~itvh~Rt------~~~~G~~g~~~~~~~~~~~~~i~~i~~---~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
.++.+.++|+|+|.+.+.. ....+. +...+..+..+++ .. ++|||+.|||.+++|+.++++.
T Consensus 291 ~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~--------g~p~~~~l~~v~~~~~~~-~ipvia~GGI~~~~di~kala~ 361 (494)
T 1vrd_A 291 GTEALIKAGADAVKVGVGPGSICTTRVVAGV--------GVPQLTAVMECSEVARKY-DVPIIADGGIRYSGDIVKALAA 361 (494)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCHHHHHHCC--------CCCHHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCCCccccccccCCC--------CccHHHHHHHHHHHHhhc-CCCEEEECCcCCHHHHHHHHHc
Confidence 5688999999999994321 111121 1124555555444 35 7999999999999999999987
Q ss_pred -cCEEEEehhhhhCCcc
Q psy2386 208 -IDGVMLGREAYKNPFL 223 (311)
Q Consensus 208 -adgVmigRa~l~~P~i 223 (311)
||+|++||+++..|..
T Consensus 362 GAd~V~iGr~~l~~~e~ 378 (494)
T 1vrd_A 362 GAESVMVGSIFAGTEEA 378 (494)
T ss_dssp TCSEEEESHHHHTBTTS
T ss_pred CCCEEEECHHHhcCCcC
Confidence 9999999999987765
No 90
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.07 E-value=4e-09 Score=99.98 Aligned_cols=146 Identities=11% Similarity=0.047 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
.++++++++|+.+.+.||+.|.|++||+. +| .+.+++...++++++|+++ ++++.|+..-+|+. +
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~----~ 214 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSR----T 214 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCH----H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----H
Confidence 68999999999998899999999999964 22 4468999999999999987 68999999888864 3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCC-HHHHHHHHhh--cC
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT-KKEIDLHLNY--ID 209 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s-~~da~~~l~~--ad 209 (311)
+..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.| ++++.++++. ||
T Consensus 215 ~a~~~~~~l~~~~i~~iE--------~P--------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~i~~~~~d 277 (382)
T 1rvk_A 215 DALALGRGLEKLGFDWIE--------EP--------MDEQSLSSYKWLSDNL-DIPVVGPESAAGKHWHRAEWIKAGACD 277 (382)
T ss_dssp HHHHHHHHHHTTTCSEEE--------CC--------SCTTCHHHHHHHHHHC-SSCEEECSSCSSHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHhcCCCEEe--------CC--------CChhhHHHHHHHHhhC-CCCEEEeCCccCcHHHHHHHHHcCCCC
Confidence 578999999999999872 11 1235899999999998 799999999999 9999999976 99
Q ss_pred EEEEehhhhhCCcchHHhHhh
Q psy2386 210 GVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 210 gVmigRa~l~~P~i~~~~~~~ 230 (311)
.|++--.-.+...-+.++.+.
T Consensus 278 ~v~ik~~~~GGit~~~~i~~~ 298 (382)
T 1rvk_A 278 ILRTGVNDVGGITPALKTMHL 298 (382)
T ss_dssp EEEECHHHHTSHHHHHHHHHH
T ss_pred EEeeCchhcCCHHHHHHHHHH
Confidence 999988888777766665543
No 91
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.06 E-value=1.1e-09 Score=107.89 Aligned_cols=138 Identities=19% Similarity=0.243 Sum_probs=97.1
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGID 126 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~ 126 (311)
+.+.++ ...+.+.+ ++.+.++|+|.|.||..+|. +..+.++++++++.. ++||.++--.
T Consensus 247 V~aavg-~~~d~~er-a~aLveaGvd~I~Id~a~g~---------------~~~v~~~i~~i~~~~~~~~vi~g~v~--- 306 (511)
T 3usb_A 247 VGAAVG-VTADAMTR-IDALVKASVDAIVLDTAHGH---------------SQGVIDKVKEVRAKYPSLNIIAGNVA--- 306 (511)
T ss_dssp CEEEEC-SSTTHHHH-HHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTSEEEEEEEC---
T ss_pred eeeeee-eccchHHH-HHHHHhhccceEEecccccc---------------hhhhhhHHHHHHHhCCCceEEeeeec---
Confidence 445553 33444444 44566789999999988763 355778888998876 4788876321
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEe------cCccccccCCCCcCCCCCcCcHHHHHHHH---HhCCCCeEEEecCCCC
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVH------ARNAFLKKLNPKQNRKIPILKYNFVYNLK---KDFPELEIIINGGIKT 197 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh------~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~---~~~~~ipvi~nGgI~s 197 (311)
..+.++.+.++|+|+|.+- ..+....|.. ..++..+.+++ +.+ ++|||+.|||.+
T Consensus 307 -------t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g--------~p~~~~l~~v~~~~~~~-~iPVIa~GGI~~ 370 (511)
T 3usb_A 307 -------TAEATKALIEAGANVVKVGIGPGSICTTRVVAGVG--------VPQLTAVYDCATEARKH-GIPVIADGGIKY 370 (511)
T ss_dssp -------SHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCC--------CCHHHHHHHHHHHHHTT-TCCEEEESCCCS
T ss_pred -------cHHHHHHHHHhCCCEEEECCCCccccccccccCCC--------CCcHHHHHHHHHHHHhC-CCcEEEeCCCCC
Confidence 2467899999999999982 2222122321 24666666654 444 699999999999
Q ss_pred HHHHHHHHhh-cCEEEEehhhhhCC
Q psy2386 198 KKEIDLHLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 198 ~~da~~~l~~-adgVmigRa~l~~P 221 (311)
++|+.++++. ||+||+||+++.-.
T Consensus 371 ~~di~kala~GA~~V~vGs~~~~~~ 395 (511)
T 3usb_A 371 SGDMVKALAAGAHVVMLGSMFAGVA 395 (511)
T ss_dssp HHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred HHHHHHHHHhCchhheecHHHhcCc
Confidence 9999999987 99999999985544
No 92
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.05 E-value=4.4e-09 Score=100.10 Aligned_cols=135 Identities=17% Similarity=0.195 Sum_probs=95.0
Q ss_pred HHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHH
Q psy2386 61 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGT 140 (311)
Q Consensus 61 ~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~ 140 (311)
.+.++.+.++|+|.|.|+.+. -+++.+.++++.+++..++||.++.-. ..+.++.
T Consensus 146 ~e~~~~lveaGvdvIvldta~---------------G~~~~~~e~I~~ik~~~~i~Vi~g~V~----------t~e~A~~ 200 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH---------------GHSLNIIRTLKEIKSKMNIDVIVGNVV----------TEEATKE 200 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC---------------CSBHHHHHHHHHHHTTCCCEEEEEEEC----------SHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCC---------------CCcccHHHHHHHHHhcCCCeEEEeecC----------CHHHHHH
Confidence 345666777899999987432 135667788899998888999886221 2567899
Q ss_pred HHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC--CCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhh
Q psy2386 141 VSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF--PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREA 217 (311)
Q Consensus 141 l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~--~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~ 217 (311)
++++|+|+|.+.. .....+ ........+..++..+.++++.+ .++|||+.|||.+++|+.++++. ||+||+|+++
T Consensus 201 a~~aGAD~I~vG~-g~Gs~~-~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f 278 (400)
T 3ffs_A 201 LIENGADGIKVGI-GPGSIC-TTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSIL 278 (400)
T ss_dssp HHHTTCSEEEECC-----------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGG
T ss_pred HHHcCCCEEEEeC-CCCcCc-ccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 9999999999931 110000 00000011224678888887642 27999999999999999999987 9999999999
Q ss_pred hhCCc
Q psy2386 218 YKNPF 222 (311)
Q Consensus 218 l~~P~ 222 (311)
+.-+.
T Consensus 279 ~~t~E 283 (400)
T 3ffs_A 279 AGTEE 283 (400)
T ss_dssp TTBTT
T ss_pred hcCCC
Confidence 88664
No 93
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.04 E-value=4.9e-09 Score=98.96 Aligned_cols=147 Identities=13% Similarity=0.168 Sum_probs=119.8
Q ss_pred CeEEEecCCCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEec
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI 123 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~ 123 (311)
|+-.-+.+.+|+.++++|+.+.+ .||+.|.|++||+ +++...++++++|+++ ++++.++..-
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 44445566789999999998888 9999999999885 3566778899998877 4788888887
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+. ++..++++.+++.|+++|. +- .++.||+..+++++.+ ++||++.+.+.+++++.+
T Consensus 198 ~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 256 (370)
T 1nu5_A 198 GWDE----QTASIWIPRLEEAGVELVE--------QP--------VPRANFGALRRLTEQN-GVAILADESLSSLSSAFE 256 (370)
T ss_dssp CCCH----HHHHHHHHHHHHHTCCEEE--------CC--------SCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHH
T ss_pred CCCH----HHHHHHHHHHHhcCcceEe--------CC--------CCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHHHH
Confidence 7764 3578999999999999873 11 1335899999999998 799999999999999999
Q ss_pred HHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 204 HLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 204 ~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+++. ||.|++--+-.+..+-..++.+
T Consensus 257 ~i~~~~~d~v~ik~~~~GGit~~~~i~~ 284 (370)
T 1nu5_A 257 LARDHAVDAFSLKLCNMGGIANTLKVAA 284 (370)
T ss_dssp HHHTTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HHHhCCCCEEEEchhhcCCHHHHHHHHH
Confidence 9976 9999998888777776655544
No 94
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.02 E-value=2.5e-09 Score=100.78 Aligned_cols=129 Identities=15% Similarity=0.201 Sum_probs=93.3
Q ss_pred HHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHH
Q psy2386 60 LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFV 138 (311)
Q Consensus 60 ~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~ 138 (311)
+.+.++.+.++|+|.|.||... | +++.+.+.++.+++.. ++||.+..-. ..+.+
T Consensus 109 ~~~~~~~lieaGvd~I~idta~----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v~----------t~e~A 163 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSH----------G-----HSEGVLQRIRETRAAYPHLEIIGGNVA----------TAEGA 163 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSC----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEEC----------SHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCC----------C-----CCHHHHHHHHHHHHhcCCCceEeeeeC----------CHHHH
Confidence 4455667778899999998421 1 3466777888888876 7888774211 24678
Q ss_pred HHHHHcCCCEEEEe------cCccccccCCCCcCCCCCcCcHHHHHHHHH---hCCCCeEEEecCCCCHHHHHHHHhh-c
Q psy2386 139 GTVSSAGCRTFIVH------ARNAFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-I 208 (311)
Q Consensus 139 ~~l~~~G~~~itvh------~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~---~~~~ipvi~nGgI~s~~da~~~l~~-a 208 (311)
+.++++|+|+|.+. ..++...+ .+...+..+.++++ .. ++|||+.|||.++.|+.+++.. |
T Consensus 164 ~~a~~aGAD~I~vG~gpGs~~~tr~~~g--------~g~p~~~~l~~v~~~~~~~-~iPVIA~GGI~~~~di~kala~GA 234 (366)
T 4fo4_A 164 RALIEAGVSAVKVGIGPGSICTTRIVTG--------VGVPQITAIADAAGVANEY-GIPVIADGGIRFSGDISKAIAAGA 234 (366)
T ss_dssp HHHHHHTCSEEEECSSCSTTBCHHHHHC--------CCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEecCCCCCCCcccccC--------cccchHHHHHHHHHHHhhc-CCeEEEeCCCCCHHHHHHHHHcCC
Confidence 88999999999992 11110111 12246677777665 44 7999999999999999999987 9
Q ss_pred CEEEEehhhhhCCc
Q psy2386 209 DGVMLGREAYKNPF 222 (311)
Q Consensus 209 dgVmigRa~l~~P~ 222 (311)
|+||+|+.++.-+.
T Consensus 235 d~V~vGs~f~~t~E 248 (366)
T 4fo4_A 235 SCVMVGSMFAGTEE 248 (366)
T ss_dssp SEEEESTTTTTBTT
T ss_pred CEEEEChHhhcCCC
Confidence 99999999987654
No 95
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.02 E-value=3.8e-09 Score=91.39 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=99.5
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+.|+++.|.+.+++++.+.++.+.+.|++.|+++++||.. .+.++.+|+.++..+.+...
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~-- 68 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAG-- 68 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEE--
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEec--
Confidence 4689999999999999999999999999999999988732 24566666654211222221
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc-------------ccc-CCCC-------------cCCCCCcCcHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF-------------LKK-LNPK-------------QNRKIPILKYNFV 177 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~-------------~~G-~~g~-------------~~~~~~~~~~~~i 177 (311)
... + .+-++.+.++|+|+| +++-... ..| .++. ......+...+.+
T Consensus 69 ~v~--~----~~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~ 141 (205)
T 1wa3_A 69 TVT--S----VEQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFV 141 (205)
T ss_dssp SCC--S----HHHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred ccC--C----HHHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHH
Confidence 111 1 233566677888888 6644320 000 0000 0000001245778
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~ 219 (311)
+++++.+|++||++.|||. ++++.++++. +|+|.+|++++.
T Consensus 142 ~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 142 KAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp HHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred HHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 8888877679999999996 7899999987 999999999987
No 96
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.01 E-value=9.8e-09 Score=94.04 Aligned_cols=162 Identities=19% Similarity=0.237 Sum_probs=102.8
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
..|+++.+.+ .+.|+.+.+.|+++|+++.++|...... .|+.+.++++.+ +.+++.+++|+.++.+.+
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~--~G~~~~~~~~~i----~~i~~~~~~Pvi~~~~~~ 88 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRAQ--GGVARMSDPKII----KEIMAAVSIPVMAKVRIG 88 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHHT--TCCCCCCCHHHH----HHHHTTCSSCEEEEEETT
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHhh--cCCccCCCHHHH----HHHHHhcCCCeEEEeccC
Confidence 4688887765 4566667788999999988776543222 366677777664 456667789999988765
Q ss_pred CCC---------------------CC------c----------HHHHHHHHHHHHHcCCCEEEEecCcc-----------
Q psy2386 125 IDD---------------------IN------S----------YDFVRDFVGTVSSAGCRTFIVHARNA----------- 156 (311)
Q Consensus 125 ~~~---------------------~~------~----------~~~~~e~~~~l~~~G~~~itvh~Rt~----------- 156 (311)
+.+ .+ . ... .+-+..+.++|+|+|++||-..
T Consensus 89 ~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~-~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~ 167 (297)
T 2zbt_A 89 HFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARN-LGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHA 167 (297)
T ss_dssp CHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESS-HHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCC-HHHHHHHHHcCCCEEEEcccccCcchHHHHhhH
Confidence 200 00 0 000 1112233445555555553100
Q ss_pred --------ccccCCCCcC---CCCCcCcHHHHHHHHHhCCCCeEE--EecCCCCHHHHHHHHhh-cCEEEEehhhhhC
Q psy2386 157 --------FLKKLNPKQN---RKIPILKYNFVYNLKKDFPELEII--INGGIKTKKEIDLHLNY-IDGVMLGREAYKN 220 (311)
Q Consensus 157 --------~~~G~~g~~~---~~~~~~~~~~i~~i~~~~~~ipvi--~nGgI~s~~da~~~l~~-adgVmigRa~l~~ 220 (311)
...|+++... ....+.+++.++++++.. ++||+ +.|||.|++|+.++++. ||+|++|++++..
T Consensus 168 ~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~ 244 (297)
T 2zbt_A 168 RTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS 244 (297)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS
T ss_pred HHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC
Confidence 0011211100 001235788999999987 79998 99999999999999987 9999999999953
No 97
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.00 E-value=6.5e-09 Score=97.96 Aligned_cols=149 Identities=11% Similarity=0.097 Sum_probs=121.8
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-.++++.+|+++.+.|+.+.+.||+.|.|++||+ +++...++++++|+++ ++++.++..
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan 193 (366)
T 1tkk_A 129 TLETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDAN 193 (366)
T ss_dssp EEEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred ceeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 34556778888999999999988888999999998872 4677788999999987 688999988
Q ss_pred ccCCCCCcHHHHHHHHHHHHH--cCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSS--AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~--~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
-+|+. ++..++++.+++ .|+++|- +- .++.||+..+++++.. ++||.+.+.+.++++
T Consensus 194 ~~~~~----~~a~~~~~~l~~~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 252 (366)
T 1tkk_A 194 QGWRP----KEAVTAIRKMEDAGLGIELVE--------QP--------VHKDDLAGLKKVTDAT-DTPIMADESVFTPRQ 252 (366)
T ss_dssp TCSCH----HHHHHHHHHHHHTTCCEEEEE--------CC--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCCCceEEE--------CC--------CCcccHHHHHHHHhhC-CCCEEEcCCCCCHHH
Confidence 88864 357899999999 8887772 11 1345899999999998 799999999999999
Q ss_pred HHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 201 IDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 201 a~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.++++. ||.|++--.-.+...-..++.+
T Consensus 253 ~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 283 (366)
T 1tkk_A 253 AFEVLQTRSADLINIKLMKAGGISGAEKINA 283 (366)
T ss_dssp HHHHHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEeehhhhcCHHHHHHHHH
Confidence 9999975 9999998888777765555543
No 98
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.99 E-value=6.6e-09 Score=98.13 Aligned_cols=146 Identities=11% Similarity=0.064 Sum_probs=121.3
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
+..|+-..+.+.+|++++++|+.+.+.||+.|.|++|+ +++...++++++|+++ ++++.++.
T Consensus 134 ~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 134 TRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp SCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 35567777888899999999999999999999999774 4788889999999988 68899988
Q ss_pred eccCCCCCcHHHHHHHHHHH-HHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTV-SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l-~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
.-+|+. ++..++++.+ ++.|+ +|. +. ..||+..+++++.+ ++||++.+.+.++++
T Consensus 198 n~~~~~----~~a~~~~~~l~~~~~i-~iE---------------~P---~~~~~~~~~l~~~~-~iPI~~dE~~~~~~~ 253 (371)
T 2ps2_A 198 NGKLSV----ETALRLLRLLPHGLDF-ALE---------------AP---CATWRECISLRRKT-DIPIIYDELATNEMS 253 (371)
T ss_dssp TTBCCH----HHHHHHHHHSCTTCCC-EEE---------------CC---BSSHHHHHHHHTTC-CSCEEESTTCCSHHH
T ss_pred CCCcCH----HHHHHHHHHHHhhcCC-cCc---------------CC---cCCHHHHHHHHhhC-CCCEEeCCCcCCHHH
Confidence 888864 3578999999 99998 662 10 12899999999988 799999999999999
Q ss_pred HHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 201 IDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 201 a~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.++++. ||.|++--+-.+...-..++.+
T Consensus 254 ~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 284 (371)
T 2ps2_A 254 IVKILADDAAEGIDLKISKAGGLTRGRRQRD 284 (371)
T ss_dssp HHHHHHHTCCSEEEEEHHHHTSHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEechhhcCCHHHHHHHHH
Confidence 9999976 9999999888888776655543
No 99
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.98 E-value=6.3e-09 Score=99.01 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=123.7
Q ss_pred CCeEEEe-c-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 46 HPIAFQV-G-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 46 ~p~~~Ql-~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
.|+-..+ . +.+|+++++.++.+.+.||+.|.|++|| +++.-.++++++|+++ ++++.|+.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 5777777 5 7899999999999988999999999987 4677888999999987 68999999
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHH-HhCCCCeEEEecCCCCHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK-KDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~-~~~~~ipvi~nGgI~s~~d 200 (311)
.-+|+.. +..++++.+++.|+++|. + ..++.||+..++++ +.+ ++||++.+.+.|+++
T Consensus 203 n~~~~~~----~A~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~~-~iPIa~dE~i~~~~~ 261 (389)
T 3ozy_A 203 NQSLGRH----DALAMLRILDEAGCYWFE--------E--------PLSIDDIEGHRILRAQGT-PVRIATGENLYTRNA 261 (389)
T ss_dssp TTCCCHH----HHHHHHHHHHHTTCSEEE--------S--------CSCTTCHHHHHHHHTTCC-SSEEEECTTCCHHHH
T ss_pred CCCcCHH----HHHHHHHHHHhcCCCEEE--------C--------CCCcccHHHHHHHHhcCC-CCCEEeCCCCCCHHH
Confidence 8888743 568899999999999983 1 11235899999999 887 799999999999999
Q ss_pred HHHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 201 IDLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 201 a~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
+.++++. ||.|++--+-.+...-..++.+.
T Consensus 262 ~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~ 293 (389)
T 3ozy_A 262 FNDYIRNDAIDVLQADASRAGGITEALAISAS 293 (389)
T ss_dssp HHHHHHTTCCSEECCCTTTSSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEeCccccCCHHHHHHHHHH
Confidence 9999975 99999988887777756565543
No 100
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.97 E-value=6.8e-09 Score=98.82 Aligned_cols=144 Identities=10% Similarity=0.068 Sum_probs=118.8
Q ss_pred Eec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCC
Q psy2386 51 QVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 127 (311)
Q Consensus 51 Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~ 127 (311)
.+. +.+|++|+++|+.+.+.||+.|.|+.|+. .++...++++++|+++ ++++.|+..-+|+.
T Consensus 143 ~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 207 (391)
T 2qgy_A 143 WSDLKKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDL 207 (391)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCH
Confidence 344 67999999999999999999999997731 1688889999999987 68999999888864
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
++..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.|++++.++++.
T Consensus 208 ----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 266 (391)
T 2qgy_A 208 ----DQTKSFLKEVSSFNPYWIE--------EP--------VDGENISLLTEIKNTF-NMKVVTGEKQSGLVHFRELISR 266 (391)
T ss_dssp ----HHHHHHHHHHGGGCCSEEE--------CS--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHhcCCCeEe--------CC--------CChhhHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHHHHc
Confidence 3578999999999999873 11 1235899999999998 7999999999999999999975
Q ss_pred --cCEEEEehhhhhCCcchHHhHhh
Q psy2386 208 --IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 208 --adgVmigRa~l~~P~i~~~~~~~ 230 (311)
||.|++-.+-.+..+-+.++.+.
T Consensus 267 ~~~d~v~ik~~~~GGit~~~~i~~~ 291 (391)
T 2qgy_A 267 NAADIFNPDISGMGGLIDIIEISNE 291 (391)
T ss_dssp TCCSEECCBTTTSSCHHHHHHHHHH
T ss_pred CCCCEEEECcchhCCHHHHHHHHHH
Confidence 99999988887777766665543
No 101
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.92 E-value=9.6e-09 Score=98.28 Aligned_cols=153 Identities=15% Similarity=0.143 Sum_probs=119.2
Q ss_pred CCCeEEE-ec-C-C-------CHHHHHHHHHHHHHcCCCEEEecc------CC----CccccccCcccCccc-CChHHHH
Q psy2386 45 EHPIAFQ-VG-D-N-------EPKKLAKSAKIIQKWGYDEINLNC------GC----PSNRVQNGFFGAILM-TKPLLVS 103 (311)
Q Consensus 45 ~~p~~~Q-l~-g-~-------~~~~~~~aa~~~~~~g~d~IdiN~------gC----P~~~v~~~~~G~~Ll-~~~~~~~ 103 (311)
..|+-.+ +. | . ++++|+++|+.+.+.||+.|.|+. |+ |..+ ..+|+... ++++...
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~---~~~GG~~~~~~~~~~~ 205 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN---RNYSGLLLADQLKMGE 205 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC---GGGGSCCCHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc---ccccCccchhHHHHHH
Confidence 3456555 65 4 4 899999999999999999999996 76 3332 24666553 5778889
Q ss_pred HHHHHHhccc--cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHH
Q psy2386 104 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 181 (311)
Q Consensus 104 ~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~ 181 (311)
++++++|+++ ++++.++..-+|+. ++..++++.+++.|+++|. +- .++.||+..++++
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~~----~~ai~~~~~l~~~~i~~iE--------~P--------~~~~~~~~~~~l~ 265 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLGT----NSAIQFAKAIEKYRIFLYE--------EP--------IHPLNSDNMQKVS 265 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCH----HHHHHHHHHHGGGCEEEEE--------CS--------SCSSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCH----HHHHHHHHHHHhcCCCeEE--------CC--------CChhhHHHHHHHH
Confidence 9999999987 58888888777763 3578999999999988763 11 1235899999999
Q ss_pred HhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCC
Q psy2386 182 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 182 ~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P 221 (311)
+.+ ++||++.+.+.|++++.++++. ||.|++--.-.+..
T Consensus 266 ~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 306 (410)
T 2gl5_A 266 RST-TIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGI 306 (410)
T ss_dssp HHC-SSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHH
T ss_pred hhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCH
Confidence 998 7999999999999999999975 99999854444333
No 102
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.90 E-value=1.7e-08 Score=90.73 Aligned_cols=162 Identities=14% Similarity=0.188 Sum_probs=106.2
Q ss_pred CCCeEEEecCCCH--HHHHHHHHHHHHcCCCEEEeccCCCccccc----c------CcccCcccCChHHHHHHHHHHhcc
Q psy2386 45 EHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLNCGCPSNRVQ----N------GFFGAILMTKPLLVSDCIKAMRDS 112 (311)
Q Consensus 45 ~~p~~~Ql~g~~~--~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~----~------~~~G~~Ll~~~~~~~~iv~~v~~~ 112 (311)
+..+++-|...+| +.+.+.++.+.+.|+|.|+|+.-|+-|..- . -..| -+++...++++++++.
T Consensus 17 ~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g----~~~~~~~~~i~~ir~~ 92 (262)
T 1rd5_A 17 KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASG----TTMDAVLEMLREVTPE 92 (262)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTT----CCHHHHHHHHHHHGGG
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhc
Confidence 4457777777666 889999999999999999998766533210 0 0011 2678889999999998
Q ss_pred ccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEec--------------------------Ccc-----c----
Q psy2386 113 VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHA--------------------------RNA-----F---- 157 (311)
Q Consensus 113 ~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~--------------------------Rt~-----~---- 157 (311)
+++||.+-.+..... ...++.+.++|++.+++|. .+. .
T Consensus 93 ~~~Pv~~m~~~~~~~-------~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~ 165 (262)
T 1rd5_A 93 LSCPVVLLSYYKPIM-------FRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKA 165 (262)
T ss_dssp CSSCEEEECCSHHHH-------SCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHH
T ss_pred CCCCEEEEecCcHHH-------HHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhc
Confidence 899987743221000 0001124455555555331 110 0
Q ss_pred ---------cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh
Q psy2386 158 ---------LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 158 ---------~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~ 219 (311)
..|++|.... ..+...+.++++++.. ++||++.|||.|++++.++++. ||+|.+|++++.
T Consensus 166 ~~g~v~~~s~~G~tG~~~~-~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 166 SEGFVYLVSVNGVTGPRAN-VNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp CCSCEEEECSSCCBCTTSC-BCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CCCeEEEecCCCCCCCCcC-CCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 1122332111 1223457899999987 8999999999999999999986 999999999854
No 103
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.90 E-value=5.8e-08 Score=88.88 Aligned_cols=141 Identities=19% Similarity=0.212 Sum_probs=90.6
Q ss_pred HHHHHHHcCCCEEEe--ccCCCccccccCcccC-cccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHH
Q psy2386 63 SAKIIQKWGYDEINL--NCGCPSNRVQNGFFGA-ILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVG 139 (311)
Q Consensus 63 aa~~~~~~g~d~Idi--N~gCP~~~v~~~~~G~-~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~ 139 (311)
.|+..++.|++.|-+ |..|+... +|+ .-+.+++. ++++++.+++||.+|.|.+. .+.++
T Consensus 33 ~A~~ye~~GA~~lsvLe~~~~Di~~-----~~g~~R~~~~~~----i~~i~~~v~iPvl~k~~i~~---------ide~q 94 (297)
T 4adt_A 33 QAKIAEKAGAIGVMILENIPSELRN-----TDGVARSVDPLK----IEEIRKCISINVLAKVRIGH---------FVEAQ 94 (297)
T ss_dssp HHHHHHHHTCSEEEECCCCC----------CCCCCCCCCHHH----HHHHHTTCCSEEEEEEETTC---------HHHHH
T ss_pred HHHHHHHcCCCEEEEecCCCCcchh-----cCCcccCCCHHH----HHHHHHhcCCCEEEeccCCc---------HHHHH
Confidence 467778889998755 45565543 333 45566666 45567778999999988753 24456
Q ss_pred HHHHcCCCEEEEecC-cc--------c-----------------------------cccC--CCC---------------
Q psy2386 140 TVSSAGCRTFIVHAR-NA--------F-----------------------------LKKL--NPK--------------- 164 (311)
Q Consensus 140 ~l~~~G~~~itvh~R-t~--------~-----------------------------~~G~--~g~--------------- 164 (311)
.++++|+|.|..... +. . .+|. +|.
T Consensus 95 il~aaGAD~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 95 ILEELKVDMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEI 174 (297)
T ss_dssp HHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhh
Confidence 666777777731110 00 0 0010 110
Q ss_pred --------cCC----CCCcCcHHHHHHHHHhCCCCeEE--EecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 165 --------QNR----KIPILKYNFVYNLKKDFPELEII--INGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 165 --------~~~----~~~~~~~~~i~~i~~~~~~ipvi--~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
.+. .....+++.++++++.+ ++||+ +.|||.|++|+.++++. ||+|++|++++..+.
T Consensus 175 r~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~d 246 (297)
T 4adt_A 175 KYLCSLDESEVYNFAKKLRAPIDLILLTRKLK-RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT-SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSC
T ss_pred hhhccccccccccccccCCCCHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCC
Confidence 000 00135789999999987 68886 99999999999999987 999999999997544
No 104
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.86 E-value=1.7e-07 Score=83.31 Aligned_cols=145 Identities=10% Similarity=0.196 Sum_probs=106.8
Q ss_pred CCCeEEEecC-CCHHHHHHHHHHHHH-c-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 45 EHPIAFQVGD-NEPKKLAKSAKIIQK-W-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g-~~~~~~~~aa~~~~~-~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
.-.+..+-.| .+.++-...|+++.+ + |-++|-|-.- .+ --.|+.|+....+..+.+.+. ++.|..-+
T Consensus 73 ~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~-------~d--~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~ 142 (265)
T 1wv2_A 73 RYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVL-------AD--QKTLFPNVVETLKAAEQLVKD-GFDVMVYT 142 (265)
T ss_dssp TSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCB-------SC--TTTCCBCHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEee-------cC--ccccCcCHHHHHHHHHHHHHC-CCEEEEEe
Confidence 4456666665 478999999999988 4 4577777521 11 124778888877777777654 55443222
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
- ++ ..+++++++.|++.|..+|..- | +| .+..|+++|+.+++.. ++|||+.|||.|++|+
T Consensus 143 ~---dd-------~~~akrl~~~G~~aVmPlg~pI---G-sG-----~Gi~~~~lI~~I~e~~-~vPVI~eGGI~TPsDA 202 (265)
T 1wv2_A 143 S---DD-------PIIARQLAEIGCIAVMPLAGLI---G-SG-----LGICNPYNLRIILEEA-KVPVLVDAGVGTASDA 202 (265)
T ss_dssp C---SC-------HHHHHHHHHSCCSEEEECSSST---T-CC-----CCCSCHHHHHHHHHHC-SSCBEEESCCCSHHHH
T ss_pred C---CC-------HHHHHHHHHhCCCEEEeCCccC---C-CC-----CCcCCHHHHHHHHhcC-CCCEEEeCCCCCHHHH
Confidence 2 11 4789999999999998887631 1 01 1235899999999986 8999999999999999
Q ss_pred HHHHhh-cCEEEEehhhhh
Q psy2386 202 DLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 202 ~~~l~~-adgVmigRa~l~ 219 (311)
.++++. ||||++|+++..
T Consensus 203 a~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 203 AIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHTCSEEEESHHHHT
T ss_pred HHHHHcCCCEEEEChHHhC
Confidence 999987 999999999854
No 105
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.85 E-value=4.7e-09 Score=93.57 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
++.++++.++++|++.|+++..+....+ .+.+++.++++++.+ ++||+++|+|.+++++.++++. ||+|
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~---------~~~~~~~i~~i~~~~-~ipvi~~ggI~~~~~~~~~~~~Gad~V 100 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEK---------RKTMLELVEKVAEQI-DIPFTVGGGIHDFETASELILRGADKV 100 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSH---------HHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcC---------CcccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 3678999999999999999977642111 124788999999987 8999999999999999999987 9999
Q ss_pred EEehhhhhCCcchHHhHhhh
Q psy2386 212 MLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 212 migRa~l~~P~i~~~~~~~~ 231 (311)
++|++++.+|+.+.++.+.+
T Consensus 101 ~lg~~~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 101 SINTAAVENPSLITQIAQTF 120 (253)
T ss_dssp EESHHHHHCTHHHHHHHHHH
T ss_pred EEChHHHhChHHHHHHHHHc
Confidence 99999999999888876653
No 106
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.84 E-value=4.7e-08 Score=84.90 Aligned_cols=150 Identities=15% Similarity=0.296 Sum_probs=92.4
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc--c--ccCcccCccc------CChHHHHHHHHH-----
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR--V--QNGFFGAILM------TKPLLVSDCIKA----- 108 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~--v--~~~~~G~~Ll------~~~~~~~~iv~~----- 108 (311)
.+.|+++.|.+.|++++.+.++.+.+.|++.|++...+|... + ....++..++ .+++.+...++.
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V 84 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLI 84 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEE
Confidence 368999999999999999999999999999999998776421 0 0111111111 122222211110
Q ss_pred -----------HhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 109 -----------MRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 109 -----------v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
.++..+.++.+ |. .+ ..+ +....+.|+|+|.+++.. +..++.+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~----g~---~t---~~e-~~~a~~~G~d~v~v~~t~---------------~~g~~~~ 138 (212)
T 2v82_A 85 VTPNIHSEVIRRAVGYGMTVCP----GC---AT---ATE-AFTALEAGAQALKIFPSS---------------AFGPQYI 138 (212)
T ss_dssp ECSSCCHHHHHHHHHTTCEEEC----EE---CS---HHH-HHHHHHTTCSEEEETTHH---------------HHCHHHH
T ss_pred EeCCCCHHHHHHHHHcCCCEEe----ec---CC---HHH-HHHHHHCCCCEEEEecCC---------------CCCHHHH
Confidence 00001111111 10 00 112 223345566665553211 1357889
Q ss_pred HHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC
Q psy2386 178 YNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN 220 (311)
Q Consensus 178 ~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~ 220 (311)
+++++.++ ++||++.|||. ++++.++++. +|+|.+|++++..
T Consensus 139 ~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 139 KALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred HHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 99998874 49999999997 9999999977 9999999999765
No 107
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.82 E-value=4e-08 Score=93.60 Aligned_cols=146 Identities=14% Similarity=0.218 Sum_probs=115.5
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-..++..+++.+.++|+.+.+.||+.|.|+.|+ +++...++++++|+++ ++++.++..
T Consensus 134 ~vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan 197 (397)
T 2qde_A 134 RIPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDIN 197 (397)
T ss_dssp SEEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECT
T ss_pred CcceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECC
Confidence 3455555544789999999999988899999999773 5677788999999987 588888887
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+. ++..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.|++++.
T Consensus 198 ~~~~~----~~a~~~~~~l~~~~i~~iE--------qP--------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 256 (397)
T 2qde_A 198 GAWTY----DQALTTIRALEKYNLSKIE--------QP--------LPAWDLDGMARLRGKV-ATPIYADESAQELHDLL 256 (397)
T ss_dssp TCCCH----HHHHHHHHHHGGGCCSCEE--------CC--------SCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHH
T ss_pred CCCCH----HHHHHHHHHHHhCCCCEEE--------CC--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHH
Confidence 77764 3578999999999999873 11 1235899999999988 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~ 227 (311)
++++. ||.|++--.-.+...=..++
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 257 AIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp HHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 99975 99999976655555433333
No 108
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.81 E-value=2.9e-08 Score=94.74 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecc------CCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCC
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNC------GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 127 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~------gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~ 127 (311)
++++|+++|+.+.+.||+.|.|+. |++... ...|....++++...++++++|+++ ++++.++..-+|+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~ 222 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL 222 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 899999999999999999999996 765322 1123223456788889999999987 68888888777764
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
++..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.|+++++++++.
T Consensus 223 ----~~ai~~~~~l~~~~i~~iE--------~P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 281 (403)
T 2ox4_A 223 ----VSAIQFAKAIEEFNIFFYE--------EI--------NTPLNPRLLKEAKKKI-DIPLASGERIYSRWGFLPFLED 281 (403)
T ss_dssp ----HHHHHHHHHHGGGCEEEEE--------CC--------SCTTSTHHHHHHHHTC-CSCEEECTTCCHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHhhCCCEEe--------CC--------CChhhHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHc
Confidence 3578999999999988772 11 1235899999999998 7999999999999999999975
Q ss_pred --cCEEEEehhhhhCC
Q psy2386 208 --IDGVMLGREAYKNP 221 (311)
Q Consensus 208 --adgVmigRa~l~~P 221 (311)
||.|++--.-.+..
T Consensus 282 ~~~d~v~ik~~~~GGi 297 (403)
T 2ox4_A 282 RSIDVIQPDLGTCGGF 297 (403)
T ss_dssp TCCSEECCCHHHHTHH
T ss_pred CCCCEEecCccccCCH
Confidence 99999965554444
No 109
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.81 E-value=2.1e-08 Score=95.38 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccc--cccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCC
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR--VQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDIN 129 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~--v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~ 129 (311)
+.++++++++|+.+.+.||+.|.|+.||+..- -....||+...++++...++++++|+++ ++++.++..-+|+.
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~-- 212 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTT-- 212 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH--
Confidence 46899999999999999999999999975320 0012345555677888999999999987 58888888777764
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 130 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 130 ~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.|++++.++++.
T Consensus 213 --~~a~~~~~~l~~~~i~~iE--------~P--------~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~ 273 (392)
T 2poz_A 213 --DETIRFCRKIGELDICFVE--------EP--------CDPFDNGALKVISEQI-PLPIAVGERVYTRFGFRKIFELQA 273 (392)
T ss_dssp --HHHHHHHHHHGGGCEEEEE--------CC--------SCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHTTTC
T ss_pred --HHHHHHHHHHHhcCCCEEE--------CC--------CCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCC
Confidence 3578999999999988762 11 1235899999999998 7999999999999999999975
Q ss_pred cCEEEEehhhhhCCc
Q psy2386 208 IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 adgVmigRa~l~~P~ 222 (311)
||.|++--.-.+...
T Consensus 274 ~d~v~ik~~~~GGit 288 (392)
T 2poz_A 274 CGIIQPDIGTAGGLM 288 (392)
T ss_dssp CSEECCCTTTSSCHH
T ss_pred CCEEecCccccCCHH
Confidence 999998544444443
No 110
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.80 E-value=7.7e-08 Score=86.87 Aligned_cols=165 Identities=15% Similarity=0.134 Sum_probs=108.3
Q ss_pred CCCeEEEecCCCH--HHHHHHHHHHHHcCCCEEEecc--CCCccc---cccCc-----ccCcccCChHHHHHHHHHHhcc
Q psy2386 45 EHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLNC--GCPSNR---VQNGF-----FGAILMTKPLLVSDCIKAMRDS 112 (311)
Q Consensus 45 ~~p~~~Ql~g~~~--~~~~~aa~~~~~~g~d~IdiN~--gCP~~~---v~~~~-----~G~~Ll~~~~~~~~iv~~v~~~ 112 (311)
+..++.-|...+| +.+.+.++.+++.|+|.|||++ +=|... +.+-. .| -+.+.+.++++++|+.
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G----~~~~~~~~~v~~ir~~ 92 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG----TTSSDCFDIITKVRAQ 92 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhc
Confidence 4568888887777 9999999999999999999973 333221 00000 11 2456778999999987
Q ss_pred -ccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEec--------------------------Ccc---------
Q psy2386 113 -VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHA--------------------------RNA--------- 156 (311)
Q Consensus 113 -~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~--------------------------Rt~--------- 156 (311)
+++|+.+-.-. +.-..+ -...|++.+.++|+|.++++. .|.
T Consensus 93 ~~~~Pivlm~Y~--npv~~~-g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~ 169 (267)
T 3vnd_A 93 HPDMPIGLLLYA--NLVFAN-GIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSE 169 (267)
T ss_dssp CTTCCEEEEECH--HHHHHH-CHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHH
T ss_pred CCCCCEEEEecC--cHHHHh-hHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHH
Confidence 78997764221 110000 125678888888888877541 110
Q ss_pred ---------ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhh
Q psy2386 157 ---------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 218 (311)
Q Consensus 157 ---------~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l 218 (311)
...|.+|... ..++...+.++++++.. ++||+..|||+|++++.+.+.. ||||.+|++++
T Consensus 170 ~~~gfvY~vS~~GvTG~~~-~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 170 QGEGYTYLLSRAGVTGTES-KAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp HCCSCEEESCCCCCC---------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred hCCCcEEEEecCCCCCCcc-CCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 0123333321 11223468899999887 8999999999999999966655 99999999885
No 111
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.79 E-value=1.4e-07 Score=89.66 Aligned_cols=123 Identities=8% Similarity=-0.018 Sum_probs=102.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
++++++++|+.+.+.||+.|.|++|+ .+++...++++++|+++ ++++.+...-+|+. ++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~----~~ 205 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTS----KE 205 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCH----HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCH----HH
Confidence 89999999999999999999999887 24577789999999988 57888888777763 35
Q ss_pred HHHHHHHHHH--cCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cC
Q psy2386 134 VRDFVGTVSS--AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 209 (311)
Q Consensus 134 ~~e~~~~l~~--~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--ad 209 (311)
..++++.+++ .|+.+|- +- .++.||+..+++++.++++||++.+.+ +++++.++++. ||
T Consensus 206 a~~~~~~l~~~g~~i~~iE--------qP--------~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d 268 (389)
T 2oz8_A 206 ALTKLVAIREAGHDLLWVE--------DP--------ILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAAD 268 (389)
T ss_dssp HHHHHHHHHHTTCCCSEEE--------SC--------BCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhcCCCceEEe--------CC--------CCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCC
Confidence 7899999999 6776652 11 123589999999998624999999999 99999999976 99
Q ss_pred EEEEe
Q psy2386 210 GVMLG 214 (311)
Q Consensus 210 gVmig 214 (311)
.|++.
T Consensus 269 ~v~ik 273 (389)
T 2oz8_A 269 ILNVH 273 (389)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99998
No 112
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.79 E-value=2.4e-07 Score=80.41 Aligned_cols=158 Identities=13% Similarity=0.123 Sum_probs=105.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc-ccc--------
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEI-------- 115 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~-~~~-------- 115 (311)
..++.+.+.+.+.+. +..+.+.|++.+=+. |. ..+.++++..+.+.+... .-.
T Consensus 53 ~~~i~vi~~~~~~~~----~~~~~~~Ga~~~l~k---p~-----------~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~ 114 (237)
T 3cwo_X 53 NAKIIVCSAMGQQAM----VIEAIKAGAKDFIVN---TA-----------AVENPSLITQIAQTFGSQAVVVAIDAKRVD 114 (237)
T ss_dssp SCCEEEECCSSTHHH----HHHHHHTTCCEEEES---HH-----------HHHCTHHHHHHHHHHTGGGEEEEEEEEESS
T ss_pred CCCEEEEECCCCHHH----HHHHHHCCHHheEeC---Cc-----------ccChHHHHHHHHHHhCCCceEEEeeecccC
Confidence 456667676666333 334456787765322 10 123456666666555432 111
Q ss_pred -eeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCc--cccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe
Q psy2386 116 -DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARN--AFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 192 (311)
Q Consensus 116 -pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt--~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n 192 (311)
.+.+....+..... ....++++.+...|+..+.+++.+ ....| .+++.+.++++.. ++|||+.
T Consensus 115 ~~~~v~~~~g~~~~~--~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g-----------~~~~~i~~~~~~~-~~Pvia~ 180 (237)
T 3cwo_X 115 GEFMVFTYSGKKNTG--ILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-----------YDTEMIRFVRPLT-TLPIIAS 180 (237)
T ss_dssp SCEEEEETTTTEEEE--EEHHHHHHHHHHHTCSEEEEEETTTTTCCSC-----------CCHHHHHHHGGGC-CSCEEEE
T ss_pred CcEEEEEeCCccccc--cCHHHHHHHHhhcCCCeEEEEecCCCCcccc-----------ccHHHHHHHHHhc-CCCEEec
Confidence 12222222211111 135788899999999989888753 21111 3588999999887 8999999
Q ss_pred cCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccC
Q psy2386 193 GGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSN 234 (311)
Q Consensus 193 GgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~ 234 (311)
||+.+++++.++++. +|+|++|++++.+||.+.++.+.+...
T Consensus 181 ~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~~l~~~ 223 (237)
T 3cwo_X 181 GGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKH 223 (237)
T ss_dssp SCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHHHHHHC
Confidence 999999999999976 999999999999999999998876543
No 113
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.79 E-value=4.5e-08 Score=93.16 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
++++|+++|+.+.+.||+.|.|+.|- .+++...+++++||+++ ++++.++..-+|+. ++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~----~~ 222 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDR----PT 222 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCH----HH
Confidence 89999999999999999999998652 24788889999999987 68899988777764 35
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 211 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgV 211 (311)
..++++.+++.|+++|. +- .++.||+..+++++.+ ++||++.+.+.+++++.++++. ||.|
T Consensus 223 a~~~~~~l~~~~i~~iE--------~P--------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v 285 (393)
T 2og9_A 223 AQRMCRIFEPFNLVWIE--------EP--------LDAYDHEGHAALALQF-DTPIATGEMLTSAAEHGDLIRHRAADYL 285 (393)
T ss_dssp HHHHHHHHGGGCCSCEE--------CC--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHhhCCCEEE--------CC--------CCcccHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHCCCCCEE
Confidence 78999999999999873 11 1235899999999998 7999999999999999999976 9999
Q ss_pred EEehhhhhCCcchHHhH
Q psy2386 212 MLGREAYKNPFLMSNFD 228 (311)
Q Consensus 212 migRa~l~~P~i~~~~~ 228 (311)
++--.-.+...=..++.
T Consensus 286 ~ik~~~~GGit~~~~i~ 302 (393)
T 2og9_A 286 MPDAPRVGGITPFLKIA 302 (393)
T ss_dssp CCCHHHHTSHHHHHHHH
T ss_pred eeCccccCCHHHHHHHH
Confidence 99765555544333443
No 114
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.78 E-value=4.3e-07 Score=82.11 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=113.9
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
-+.|+..+=|-.|+.+..+| ..+|+|+|=|+..+ + +++.+.++++..++ .+.-+.|-+..
T Consensus 119 v~lPVl~Kdfi~d~~qi~ea----~~~GAD~VlLi~a~--------------L-~~~~l~~l~~~a~~-lGl~~lvevh~ 178 (272)
T 3tsm_A 119 CSLPALRKDFLFDPYQVYEA----RSWGADCILIIMAS--------------V-DDDLAKELEDTAFA-LGMDALIEVHD 178 (272)
T ss_dssp SSSCEEEESCCCSTHHHHHH----HHTTCSEEEEETTT--------------S-CHHHHHHHHHHHHH-TTCEEEEEECS
T ss_pred cCCCEEECCccCCHHHHHHH----HHcCCCEEEEcccc--------------c-CHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 46788888778888875543 47899999997432 2 45677888888776 47776666531
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEID 202 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~ 202 (311)
.+-++++.+.|++.|-+..|+. ..+ ..|++...++.+.+| ++|+|+-|||.|++|+.
T Consensus 179 -----------~eEl~~A~~~ga~iIGinnr~l--~t~---------~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~ 236 (272)
T 3tsm_A 179 -----------EAEMERALKLSSRLLGVNNRNL--RSF---------EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCL 236 (272)
T ss_dssp -----------HHHHHHHTTSCCSEEEEECBCT--TTC---------CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHH
T ss_pred -----------HHHHHHHHhcCCCEEEECCCCC--ccC---------CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHH
Confidence 1234666789999999998863 222 257888889988876 59999999999999999
Q ss_pred HHHhh-cCEEEEehhhhhCCcchHHhHhhhcc
Q psy2386 203 LHLNY-IDGVMLGREAYKNPFLMSNFDLNYYS 233 (311)
Q Consensus 203 ~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~ 233 (311)
++.+. +|||.||.+++..+..-..+.+.+.+
T Consensus 237 ~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~g 268 (272)
T 3tsm_A 237 RLEKSGIGTFLIGESLMRQHDVAAATRALLTG 268 (272)
T ss_dssp HHHTTTCCEEEECHHHHTSSCHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEcHHHcCCcCHHHHHHHHHhc
Confidence 99986 99999999999999988877765544
No 115
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.78 E-value=3.2e-07 Score=86.02 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=96.0
Q ss_pred CeEEEecCCCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEecc
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 124 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g 124 (311)
++.+.+ |.+++.+.++..+++. .|++.|.++..- | ++..+.+.++++++.. ++||.+|.=.
T Consensus 108 ~v~~~~-g~~~~~~~~~~~l~~~~~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~- 170 (351)
T 2c6q_A 108 HLAASS-GTGSSDFEQLEQILEAIPQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNVV- 170 (351)
T ss_dssp TEEEEE-CSSHHHHHHHHHHHHHCTTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEEC-
T ss_pred eeEeec-CCChHHHHHHHHHHhccCCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeCC-
Confidence 466666 6667777665555443 388998876421 1 4566778899999988 8999887422
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCc------cccccCCCCcCCCCCcCcHHHHHHH---HHhCCCCeEEEecCC
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARN------AFLKKLNPKQNRKIPILKYNFVYNL---KKDFPELEIIINGGI 195 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt------~~~~G~~g~~~~~~~~~~~~~i~~i---~~~~~~ipvi~nGgI 195 (311)
..+-++.+.++|+|+|.|.... ....|. +......+.++ ++.. ++|||+.|||
T Consensus 171 ---------t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~--------~~p~~~~l~~v~~~~~~~-~ipvIa~GGI 232 (351)
T 2c6q_A 171 ---------TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV--------GYPQLSAVMECADAAHGL-KGHIISDGGC 232 (351)
T ss_dssp ---------SHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCB--------CCCHHHHHHHHHHHHHHT-TCEEEEESCC
T ss_pred ---------CHHHHHHHHHhCCCEEEECCCCCcCcCccccCCC--------CccHHHHHHHHHHHHhhc-CCcEEEeCCC
Confidence 1467889999999999874211 001111 11233334443 4444 7999999999
Q ss_pred CCHHHHHHHHhh-cCEEEEehhhhhC
Q psy2386 196 KTKKEIDLHLNY-IDGVMLGREAYKN 220 (311)
Q Consensus 196 ~s~~da~~~l~~-adgVmigRa~l~~ 220 (311)
+++.|+.+++.. ||+|++||.++.-
T Consensus 233 ~~g~di~kAlalGA~~V~vG~~fl~~ 258 (351)
T 2c6q_A 233 SCPGDVAKAFGAGADFVMLGGMLAGH 258 (351)
T ss_dssp CSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred CCHHHHHHHHHcCCCceeccHHHhcC
Confidence 999999999987 9999999999863
No 116
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.78 E-value=1.9e-07 Score=84.35 Aligned_cols=166 Identities=15% Similarity=0.174 Sum_probs=109.4
Q ss_pred CCCeEEEecCCCH--HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCccc----------CChHHHHHHHHHHhcc
Q psy2386 45 EHPIAFQVGDNEP--KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM----------TKPLLVSDCIKAMRDS 112 (311)
Q Consensus 45 ~~p~~~Ql~g~~~--~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll----------~~~~~~~~iv~~v~~~ 112 (311)
+..++.-|...+| +.+.+.++.+++.|+|+|+|+. |...-.-+ |.... -+.+...++++++++.
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~--P~sdp~~D--G~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV--PFSDPLAD--GPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCSCCTTC--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC--CCCCccCC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 4457888877777 8899999999999999999964 33210000 00000 1456667899999998
Q ss_pred -ccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc-----------------------------------
Q psy2386 113 -VEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA----------------------------------- 156 (311)
Q Consensus 113 -~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~----------------------------------- 156 (311)
+++||.+ +- .++.-..+ ....+++.+.++|+|.+++|.-+.
T Consensus 92 ~~~~Pv~l-m~-y~n~v~~~-g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~ 168 (268)
T 1qop_A 92 HPTIPIGL-LM-YANLVFNN-GIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVAS 168 (268)
T ss_dssp CSSSCEEE-EE-CHHHHHTT-CHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHH
T ss_pred CCCCCEEE-EE-cccHHHHh-hHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHh
Confidence 7899765 21 11100000 125778888888888888753210
Q ss_pred ---------ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh
Q psy2386 157 ---------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 157 ---------~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~ 219 (311)
...|++|.... ..+...++++++++.. ++||+..|||+|++++.+++.. ||+|++|++++.
T Consensus 169 ~~~g~v~~~s~~G~tG~~~~-~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 169 YGRGYTYLLSRSGVTGAENR-GALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp HCCSCEEEESSSSCCCSSSC-C--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hCCCcEEEEecCCcCCCccC-CCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 00133332111 1223478999999987 8999999999999999996655 999999999864
No 117
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.78 E-value=6.7e-08 Score=93.16 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
.+|+++++.|+...+.||+.|.++.|||.... .|. ....++++...+++++||+++ ++++.|...-+|+. +
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~--~G~-~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~----~ 217 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR--GGH-MPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTT----A 217 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT--CCB-CCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCH----H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc--cCC-CcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCH----H
Confidence 78999999999988899999999999997542 111 122346778889999999987 57888887777764 3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 210 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adg 210 (311)
+..++++.|++.|+.+|-- ..++.|++..+++++.+ ++||.+.+.+.|++++.++++. +|.
T Consensus 218 ~A~~~~~~Le~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~g~~D~ 280 (433)
T 3rcy_A 218 GAIRLGQAIEPYSPLWYEE----------------PVPPDNVGAMAQVARAV-RIPVATGERLTTKAEFAPVLREGAAAI 280 (433)
T ss_dssp HHHHHHHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHHS-SSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHhhhcCCCEEEC----------------CCChhhHHHHHHHHhcc-CCCEEecCCCCCHHHHHHHHHcCCCCE
Confidence 5788999999999998831 12235899999999998 7999999999999999999975 999
Q ss_pred EEEehhhhhCCcchHHhHh
Q psy2386 211 VMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 211 VmigRa~l~~P~i~~~~~~ 229 (311)
|++--+-.+...=..++.+
T Consensus 281 v~~d~~~~GGit~~~kia~ 299 (433)
T 3rcy_A 281 LQPALGRAGGIWEMKKVAA 299 (433)
T ss_dssp ECCCHHHHTHHHHHHHHHH
T ss_pred EEeCchhcCCHHHHHHHHH
Confidence 9998776666665555544
No 118
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.76 E-value=1.6e-08 Score=90.00 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
++.++++.++++|++.|.++..+.. +. ....+++.++++++.+ ++||+++|+|++++++.++++. ||+|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~--~~-------~~~~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad~V 101 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISAT--HE-------ERAILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGADKV 101 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSS--TT-------CHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCcc--cc-------CccccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 4679999999999999999866531 10 1124688899999987 8999999999999999999987 9999
Q ss_pred EEehhhhhCCcchHHhHhhh
Q psy2386 212 MLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 212 migRa~l~~P~i~~~~~~~~ 231 (311)
++|++++.+|+++.++.+.+
T Consensus 102 ~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 102 SVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp EECHHHHHCTHHHHHHHHHH
T ss_pred EEChHHHhCcHHHHHHHHHc
Confidence 99999999999988886653
No 119
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.76 E-value=7.5e-07 Score=80.63 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=106.3
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
.+.|++..=+.-|+.++.+|. .+|+|+|=|...+ + +++.+.++++..++ .+..+.+-+.
T Consensus 112 v~lPvl~kdfiid~~qv~~A~----~~GAD~VlLi~a~--------------l-~~~~l~~l~~~a~~-lGl~~lvev~- 170 (272)
T 3qja_A 112 VSIPVLRKDFVVQPYQIHEAR----AHGADMLLLIVAA--------------L-EQSVLVSMLDRTES-LGMTALVEVH- 170 (272)
T ss_dssp CSSCEEEESCCCSHHHHHHHH----HTTCSEEEEEGGG--------------S-CHHHHHHHHHHHHH-TTCEEEEEES-
T ss_pred CCCCEEECccccCHHHHHHHH----HcCCCEEEEeccc--------------C-CHHHHHHHHHHHHH-CCCcEEEEcC-
Confidence 357888777788887765543 6899999986321 1 24567777777765 5777666442
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEID 202 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~ 202 (311)
+. .+ +..+.+.|++.|-+++|+. ..+ ..|++.+.++.+.+| ++||++.|||.|++|+.
T Consensus 171 ------t~---ee-~~~A~~~Gad~IGv~~r~l--~~~---------~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~ 229 (272)
T 3qja_A 171 ------TE---QE-ADRALKAGAKVIGVNARDL--MTL---------DVDRDCFARIAPGLPSSVIRIAESGVRGTADLL 229 (272)
T ss_dssp ------SH---HH-HHHHHHHTCSEEEEESBCT--TTC---------CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHH
T ss_pred ------CH---HH-HHHHHHCCCCEEEECCCcc--ccc---------ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHH
Confidence 11 23 4455678999999998863 111 246778889988876 69999999999999999
Q ss_pred HHHhh-cCEEEEehhhhhCCcchHHhHhh
Q psy2386 203 LHLNY-IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 203 ~~l~~-adgVmigRa~l~~P~i~~~~~~~ 230 (311)
++.+. +|||.||++++..+..-..+.+.
T Consensus 230 ~l~~~GadgvlVGsal~~a~dp~~~~~~l 258 (272)
T 3qja_A 230 AYAGAGADAVLVGEGLVTSGDPRAAVADL 258 (272)
T ss_dssp HHHHTTCSEEEECHHHHTCSCHHHHHHHH
T ss_pred HHHHcCCCEEEEcHHHhCCCCHHHHHHHH
Confidence 99987 99999999999888766555543
No 120
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.75 E-value=7.8e-08 Score=91.68 Aligned_cols=136 Identities=12% Similarity=0.023 Sum_probs=110.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
++++|.++|+.+.+.||+.|.|+.|. .+++...++++++|+++ ++++.++..-+|+. ++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~----~~ 235 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDR----ET 235 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCH----HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCH----HH
Confidence 89999999999999999999998764 25778889999999987 58899988877764 35
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 211 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgV 211 (311)
..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.+++++.++++. ||.|
T Consensus 236 ai~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v 298 (398)
T 2pp0_A 236 AIRMGRKMEQFNLIWIE--------EP--------LDAYDIEGHAQLAAAL-DTPIATGEMLTSFREHEQLILGNASDFV 298 (398)
T ss_dssp HHHHHHHHGGGTCSCEE--------CC--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHHcCCceee--------CC--------CChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 78999999999999872 11 1235899999999998 7999999999999999999975 9999
Q ss_pred EEehhhhhCCcchHHh
Q psy2386 212 MLGREAYKNPFLMSNF 227 (311)
Q Consensus 212 migRa~l~~P~i~~~~ 227 (311)
++--.-.+...=..++
T Consensus 299 ~ik~~~~GGite~~~i 314 (398)
T 2pp0_A 299 QPDAPRVGGISPFLKI 314 (398)
T ss_dssp CCCHHHHTSHHHHHHH
T ss_pred EeCccccCCHHHHHHH
Confidence 9965555554433333
No 121
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.73 E-value=8.8e-08 Score=91.47 Aligned_cols=141 Identities=17% Similarity=0.173 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecc------CCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCC
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNC------GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 127 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~------gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~ 127 (311)
++++|+++|+.+.+.||+.|.|+. |++... ...|....++++...++++++|+++ ++++.++..-+|+.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQ---NLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCS---CCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccC---cccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 899999999999999999999996 653211 1122222346688889999999987 58888888777754
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
++..++++.+++.|+++|- + ..++.||+..+++++.+ ++||++.+.+.+++++.++++.
T Consensus 229 ----~~a~~~~~~l~~~~i~~iE--------~--------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 287 (407)
T 2o56_A 229 ----TSAIQFGRMIEELGIFYYE--------E--------PVMPLNPAQMKQVADKV-NIPLAAGERIYWRWGYRPFLEN 287 (407)
T ss_dssp ----HHHHHHHHHHGGGCCSCEE--------C--------SSCSSSHHHHHHHHHHC-CSCEEECTTCCHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHhcCCCEEe--------C--------CCChhhHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHc
Confidence 3578999999999999873 1 11235899999999998 7999999999999999999975
Q ss_pred --cCEEEEehhhhhC
Q psy2386 208 --IDGVMLGREAYKN 220 (311)
Q Consensus 208 --adgVmigRa~l~~ 220 (311)
||.|++=-.-.+.
T Consensus 288 ~~~d~v~ik~~~~GG 302 (407)
T 2o56_A 288 GSLSVIQPDICTCGG 302 (407)
T ss_dssp TCCSEECCCTTTTTH
T ss_pred CCCCEEecCccccCC
Confidence 9999985444333
No 122
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.73 E-value=9.1e-08 Score=91.52 Aligned_cols=135 Identities=15% Similarity=0.163 Sum_probs=108.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEecc----CCCccccccCcccCccc--CChHHHHHHHHHHhccc--cceeEEEEeccCCC
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNC----GCPSNRVQNGFFGAILM--TKPLLVSDCIKAMRDSV--EIDITVKHRIGIDD 127 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~----gCP~~~v~~~~~G~~Ll--~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~ 127 (311)
+|+.++++|+.+.+.||+.|.++. |+.... +|+.+. ++++...++++++|+++ ++++.+...-+|+.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~-----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRD-----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSC-----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC-----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 799999999999999999999998 664221 455554 47788889999999987 57888887767753
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
++..++++.+++.|+++|-- - .++.||+..+++++.+ ++||++.+.+.+++++.++++.
T Consensus 224 ----~~a~~~~~~l~~~~i~~iEe--------P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 282 (410)
T 2qq6_A 224 ----PSSIRFARAMEPFGLLWLEE--------P--------TPPENLDALAEVRRST-STPICAGENVYTRFDFRELFAK 282 (410)
T ss_dssp ----HHHHHHHHHHGGGCCSEEEC--------C--------SCTTCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHT
T ss_pred ----HHHHHHHHHHhhcCCCeEEC--------C--------CChhhHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHc
Confidence 35789999999999998731 0 1235899999999988 7999999999999999999975
Q ss_pred --cCEEEEehh
Q psy2386 208 --IDGVMLGRE 216 (311)
Q Consensus 208 --adgVmigRa 216 (311)
||.|++=-.
T Consensus 283 ~~~d~v~ik~~ 293 (410)
T 2qq6_A 283 RAVDYVMPDVA 293 (410)
T ss_dssp TCCSEECCBHH
T ss_pred CCCCEEecCcc
Confidence 999998433
No 123
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.72 E-value=9.8e-08 Score=91.46 Aligned_cols=156 Identities=11% Similarity=0.076 Sum_probs=122.9
Q ss_pred CCCCeEEE-ecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEE
Q psy2386 44 EEHPIAFQ-VGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 120 (311)
Q Consensus 44 ~~~p~~~Q-l~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvK 120 (311)
+..|+-.. +...+|+.++++|+.+.+.||+.|.|++|++.. + |+ ++++...+++++||+++ ++++.|.
T Consensus 166 ~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vD 236 (412)
T 3stp_A 166 DRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLE 236 (412)
T ss_dssp SSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 34556555 355789999999999999999999999998621 1 21 45677888999999987 6789999
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 121 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
..-+|+. ++..++++.+++.|+++|- + ..++.|++..+++++.. ++||.+.+.+.|+++
T Consensus 237 aN~~~~~----~~Ai~~~~~Le~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 295 (412)
T 3stp_A 237 CYMGWNL----DYAKRMLPKLAPYEPRWLE--------E--------PVIADDVAGYAELNAMN-IVPISGGEHEFSVIG 295 (412)
T ss_dssp CTTCSCH----HHHHHHHHHHGGGCCSEEE--------C--------CSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHH
T ss_pred CCCCCCH----HHHHHHHHHHHhcCCCEEE--------C--------CCCcccHHHHHHHHhCC-CCCEEeCCCCCCHHH
Confidence 8888864 3578999999999999883 1 11235899999999997 799999999999999
Q ss_pred HHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 201 IDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 201 a~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.++++. ||.|++--+-.+...=..++.+
T Consensus 296 ~~~li~~~a~D~v~ik~~~~GGit~a~kia~ 326 (412)
T 3stp_A 296 CAELINRKAVSVLQYDTNRVGGITAAQKINA 326 (412)
T ss_dssp HHHHHHTTCCSEECCCHHHHTHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEecChhhcCCHHHHHHHHH
Confidence 9999975 9999998777666554544443
No 124
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.72 E-value=1.5e-07 Score=84.87 Aligned_cols=167 Identities=14% Similarity=0.074 Sum_probs=100.7
Q ss_pred CeEEEecC--CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcc------cCccc--CChHHHHHHHHHHhccc-cc
Q psy2386 47 PIAFQVGD--NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFF------GAILM--TKPLLVSDCIKAMRDSV-EI 115 (311)
Q Consensus 47 p~~~Ql~g--~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~------G~~Ll--~~~~~~~~iv~~v~~~~-~~ 115 (311)
.++.=|.. .+.+...+.++.+++.|+|.|||+ -|...-..+|- -.+|- -+.+.+.++++++++.+ ++
T Consensus 18 ~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG--~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 18 ALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIG--FPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEE--CCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred eEEEEecCCCCChHHHHHHHHHHHHcCCCEEEEC--CCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 34444433 345788888999999999999995 44421100100 00000 24566778999999988 89
Q ss_pred eeEEEEeccCCCC-CcHHHHHHHHHHHHHcCCCEEEEecC--------------------------cc------------
Q psy2386 116 DITVKHRIGIDDI-NSYDFVRDFVGTVSSAGCRTFIVHAR--------------------------NA------------ 156 (311)
Q Consensus 116 pvsvKiR~g~~~~-~~~~~~~e~~~~l~~~G~~~itvh~R--------------------------t~------------ 156 (311)
|+.+ + +..+. ..+ ....+++.+.++|+|.++++.- +.
T Consensus 96 Pi~~-m--~y~n~v~~~-g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~ 171 (262)
T 2ekc_A 96 PFLL-M--TYYNPIFRI-GLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAAD 171 (262)
T ss_dssp CEEE-E--CCHHHHHHH-CHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCS
T ss_pred CEEE-E--ecCcHHHHh-hHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCC
Confidence 9877 2 11110 000 1146677777777777765321 00
Q ss_pred ------ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhC
Q psy2386 157 ------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKN 220 (311)
Q Consensus 157 ------~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~ 220 (311)
...|.+|...........++++++++.. ++||...|||.|++++.++...||+|++|++++..
T Consensus 172 gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 172 EMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHAREIGSFADGVVVGSALVKL 240 (262)
T ss_dssp SCEEEESSCC---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHHHHTTSSEEEECHHHHHH
T ss_pred CCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHHHHcCCCEEEECHHHHhh
Confidence 0002222211000011247899999987 89999999999999999965569999999999754
No 125
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.71 E-value=9.2e-08 Score=86.52 Aligned_cols=167 Identities=14% Similarity=0.121 Sum_probs=103.2
Q ss_pred CCCeEEEecCCC--HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcc------cCccc--CChHHHHHHHHHHhcc-c
Q psy2386 45 EHPIAFQVGDNE--PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFF------GAILM--TKPLLVSDCIKAMRDS-V 113 (311)
Q Consensus 45 ~~p~~~Ql~g~~--~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~------G~~Ll--~~~~~~~~iv~~v~~~-~ 113 (311)
+..++.=|...+ ++...+.++.+++.|+|.|||++ |...-..+|- --+|- -+.+.+.++++++|+. .
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGi--PfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~ 96 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGM--PFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP 96 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 345666665544 58899999999999999999974 3321111110 00010 2456778899999987 7
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEe--------------------------cCcc-----------
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVH--------------------------ARNA----------- 156 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh--------------------------~Rt~----------- 156 (311)
++|+.+-.-...-..- -...|++.+.++|+|.+++. +.+.
T Consensus 97 ~~Pivlm~Y~n~v~~~---g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 97 ETPIGLLMYANLVYAR---GIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp TSCEEEEECHHHHHHT---CHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred CCCEEEEecCcHHHHH---hHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC
Confidence 8998774321100000 12457777777777776542 1110
Q ss_pred ---c----cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhh
Q psy2386 157 ---F----LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 218 (311)
Q Consensus 157 ---~----~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l 218 (311)
. ..|.+|... ..+....++++++++.. ++||+..+||+|++++.+.+.. ||||.||+++.
T Consensus 174 ~gfiY~vs~~GvTG~~~-~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 174 KGYTYLLSRAGVTGAET-KANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp CSCEEECCCC---------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCeEEEEeccCCCCccc-CCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 0 113334321 11122357899999987 8999999999999999966665 99999999985
No 126
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.70 E-value=3.5e-07 Score=80.45 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=53.8
Q ss_pred CcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhCCcchHHhHhhh
Q psy2386 172 LKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 172 ~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
.+.+.++++++.+.++||+..|||+|++++++++..||+|.+|+++..||.++.++.+.+
T Consensus 166 ~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~~gAD~VVVGSa~v~~p~~~~~~v~a~ 225 (228)
T 3vzx_A 166 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALKTVAAV 225 (228)
T ss_dssp CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHHTTCSEEEECTHHHHCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhCCCEEEEChHHhcCHHHHHHHHHHH
Confidence 389999999998635999999999999999999966999999999999999998887654
No 127
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.70 E-value=8.2e-08 Score=91.03 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=108.9
Q ss_pred CCeEEEecC--CCH---HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeE
Q psy2386 46 HPIAFQVGD--NEP---KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDIT 118 (311)
Q Consensus 46 ~p~~~Ql~g--~~~---~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvs 118 (311)
.|+-..+++ .+| +.++++|+.+.+.||+.|.|+.|+ .+++...++++++|+++ ++++.
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~ 188 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMI 188 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEE
Confidence 344444433 678 999999999999999999999876 24677889999999987 58899
Q ss_pred EEEeccCCCCCcHHHHHHHHHHHHHc-CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCC
Q psy2386 119 VKHRIGIDDINSYDFVRDFVGTVSSA-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT 197 (311)
Q Consensus 119 vKiR~g~~~~~~~~~~~e~~~~l~~~-G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s 197 (311)
++..-+|+. ++..++++.+++. |+++|- +- .++.||+..+++++.+ ++||++.+.+.|
T Consensus 189 vDan~~~~~----~~a~~~~~~l~~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~ 247 (382)
T 2gdq_A 189 LDANQSYDA----AAAFKWERYFSEWTNIGWLE--------EP--------LPFDQPQDYAMLRSRL-SVPVAGGENMKG 247 (382)
T ss_dssp EECTTCCCH----HHHHTTHHHHTTCSCEEEEE--------CC--------SCSSCHHHHHHHHTTC-SSCEEECTTCCS
T ss_pred EECCCCCCH----HHHHHHHHHHhhccCCeEEE--------CC--------CCcccHHHHHHHHhhC-CCCEEecCCcCC
Confidence 888877764 3567899999999 888762 11 1235899999999988 799999999999
Q ss_pred HHHHHHHHhh--cCEEEEehhhh
Q psy2386 198 KKEIDLHLNY--IDGVMLGREAY 218 (311)
Q Consensus 198 ~~da~~~l~~--adgVmigRa~l 218 (311)
++++.++++. ||.|++--.-.
T Consensus 248 ~~~~~~~i~~~~~d~v~ik~~~~ 270 (382)
T 2gdq_A 248 PAQYVPLLSQRCLDIIQPDVMHV 270 (382)
T ss_dssp HHHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHHHHcCCCCEEecCcccc
Confidence 9999999975 99999854333
No 128
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.70 E-value=7.8e-07 Score=80.13 Aligned_cols=160 Identities=8% Similarity=0.050 Sum_probs=103.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCC--hHHHHHHHHHHhccccceeEEEEeccCCCC-----
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTK--PLLVSDCIKAMRDSVEIDITVKHRIGIDDI----- 128 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~--~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~----- 128 (311)
.+++..+.++.+.+.|.|+|-|. +.--+ .+.+.++++++++.+++|+..|.-.++.+.
T Consensus 51 ~~~~~~~~~~~~~~sGtDai~VG---------------S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i~~ 115 (286)
T 3vk5_A 51 PVTEAVEKAAELTRLGFAAVLLA---------------STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVVR 115 (286)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE---------------CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCCCT
T ss_pred CcHHHHHHHHHHHhcCCCEEEEc---------------cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccc
Confidence 35777777888888999999984 12123 578999999999988999999877333211
Q ss_pred -------------CcHHHHHHH------HHHH----HHcC----CCEEEEecC-cc-ccccCC---CCcC----------
Q psy2386 129 -------------NSYDFVRDF------VGTV----SSAG----CRTFIVHAR-NA-FLKKLN---PKQN---------- 166 (311)
Q Consensus 129 -------------~~~~~~~e~------~~~l----~~~G----~~~itvh~R-t~-~~~G~~---g~~~---------- 166 (311)
.....+... +..+ .+.| -.+|.+.+. +. .+-+.. ..+.
T Consensus 116 ~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~g 195 (286)
T 3vk5_A 116 GADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVA 195 (286)
T ss_dssp TCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHH
Confidence 111111111 1113 4445 012223322 11 000000 0000
Q ss_pred -----------CCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC--CcchHHhHhh
Q psy2386 167 -----------RKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN--PFLMSNFDLN 230 (311)
Q Consensus 167 -----------~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~--P~i~~~~~~~ 230 (311)
....+.+.+.|+++++.+. ++||++.|||+|+++++++++. ||+|.+|++++.| |.+++++...
T Consensus 196 ad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~e~a~~ 274 (286)
T 3vk5_A 196 RAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEIAGR 274 (286)
T ss_dssp HHTTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHHHHHC-
T ss_pred HHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHHHHHHh
Confidence 0114567899999999873 6999999999999999999986 9999999999999 7788887644
No 129
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.69 E-value=3.6e-07 Score=79.08 Aligned_cols=144 Identities=14% Similarity=0.132 Sum_probs=99.3
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+.|+.+.+.-.++... .++.+.++|+|+|-++...+ .+.+.++++.+++. +.++.+-+..-
T Consensus 53 ~~~i~~~~~~~~~~~~--~~~~~~~~Gad~v~v~~~~~----------------~~~~~~~~~~~~~~-g~~~~v~~~~~ 113 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHF--ESQLLFDAGADYVTVLGVTD----------------VLTIQSCIRAAKEA-GKQVVVDMICV 113 (211)
T ss_dssp TSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECTTC
T ss_pred CCEEEEEEEeccchHH--HHHHHHhcCCCEEEEeCCCC----------------hhHHHHHHHHHHHc-CCeEEEEecCC
Confidence 5677777665554332 25666789999999973321 24456777777664 66655432211
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 204 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~ 204 (311)
. +..+.++.+.+.|+++|.++.... |. ..++..++.++++++.++++||++.|||+ ++++.++
T Consensus 114 ----~---t~~~~~~~~~~~g~d~i~v~~g~~---g~------~~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~ 176 (211)
T 3f4w_A 114 ----D---DLPARVRLLEEAGADMLAVHTGTD---QQ------AAGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDY 176 (211)
T ss_dssp ----S---SHHHHHHHHHHHTCCEEEEECCHH---HH------HTTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHH
T ss_pred ----C---CHHHHHHHHHHcCCCEEEEcCCCc---cc------ccCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHH
Confidence 1 135778889999999998874321 10 00123678999999987689999999996 9999999
Q ss_pred Hhh-cCEEEEehhhhhCCcch
Q psy2386 205 LNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 205 l~~-adgVmigRa~l~~P~i~ 224 (311)
++. ||+|.+||+++..+...
T Consensus 177 ~~~Gad~vvvGsai~~~~d~~ 197 (211)
T 3f4w_A 177 ALLGPDVVIVGSAITHAADPA 197 (211)
T ss_dssp HTTCCSEEEECHHHHTCSSHH
T ss_pred HHcCCCEEEECHHHcCCCCHH
Confidence 986 99999999998766543
No 130
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.69 E-value=3.9e-07 Score=85.04 Aligned_cols=141 Identities=13% Similarity=0.134 Sum_probs=110.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
..|+-..+.+.+++++.+.|+.+.+.||+.|.|+.|+ +++...++++++|++- ++++.+...-
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~g~~~~l~vDan~ 191 (345)
T 2zad_A 128 EIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKVTRGAKYIVDANM 191 (345)
T ss_dssp EEEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHSTTCEEEEECTT
T ss_pred ceeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhhCCCCeEEEECCC
Confidence 3455556777899999999999889999999998775 4666678889998872 3566666655
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCC--EEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCR--TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~--~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
+|+ .++..++++.+++.|++ +|- + . .++.|++..+++++.. ++||.+.+.+.+++++
T Consensus 192 ~~~----~~~a~~~~~~l~~~~i~~~~iE--------~-------P-~~~~~~~~~~~l~~~~-~ipia~dE~~~~~~~~ 250 (345)
T 2zad_A 192 GYT----QKEAVEFARAVYQKGIDIAVYE--------Q-------P-VRREDIEGLKFVRFHS-PFPVAADESARTKFDV 250 (345)
T ss_dssp CSC----HHHHHHHHHHHHHTTCCCSEEE--------C-------C-SCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHH
T ss_pred CCC----HHHHHHHHHHHHhcCCCeeeee--------C-------C-CCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHH
Confidence 564 34578999999999999 762 1 1 1235899999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEE--ehhhhhCCc
Q psy2386 202 DLHLNY--IDGVML--GREAYKNPF 222 (311)
Q Consensus 202 ~~~l~~--adgVmi--gRa~l~~P~ 222 (311)
.++++. +|.|++ ++|-+.+..
T Consensus 251 ~~~i~~~~~d~v~ik~~~GGit~~~ 275 (345)
T 2zad_A 251 MRLVKEEAVDYVNIKLMKSGISDAL 275 (345)
T ss_dssp HHHHHHTCCSEEEECHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEecccccHHHHH
Confidence 999975 999999 776555543
No 131
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.68 E-value=4.7e-08 Score=86.55 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=73.1
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
+.++++.++++|++.|+++..+....+ .+.+ +.++++++.+ ++||+++|+|.|++++.++++. ||+|+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~---------~~~~-~~i~~i~~~~-~ipv~v~ggi~~~~~~~~~l~~Gad~V~ 101 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGR---------GSNH-ELLAEVVGKL-DVQVELSGGIRDDESLAAALATGCARVN 101 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTS---------CCCH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccC---------CChH-HHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 578999999999999999976542211 1234 8899999998 8999999999999999999987 99999
Q ss_pred EehhhhhCCcchHHhHhh
Q psy2386 213 LGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 213 igRa~l~~P~i~~~~~~~ 230 (311)
+|++++.+|+.+.++.+.
T Consensus 102 lg~~~l~~p~~~~~~~~~ 119 (244)
T 2y88_A 102 VGTAALENPQWCARVIGE 119 (244)
T ss_dssp ECHHHHHCHHHHHHHHHH
T ss_pred ECchHhhChHHHHHHHHH
Confidence 999999999988887664
No 132
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.67 E-value=5.1e-08 Score=86.49 Aligned_cols=87 Identities=13% Similarity=0.174 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
++.++++.++++|++.|+++..+....+ ...+ +.++++++.+ ++||+++|+|.|++++.++++. ||+|
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~---------~~~~-~~i~~i~~~~-~ipv~v~ggI~~~~~~~~~l~~Gad~V 101 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGT---------GDNR-ALIAEVAQAM-DIKVELSGGIRDDDTLAAALATGCTRV 101 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTS---------CCCH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcC---------CChH-HHHHHHHHhc-CCcEEEECCcCCHHHHHHHHHcCCCEE
Confidence 3578999999999999999976542222 1245 8899999998 8999999999999999999987 9999
Q ss_pred EEehhhhhCCcchHHhHhh
Q psy2386 212 MLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 212 migRa~l~~P~i~~~~~~~ 230 (311)
++|+.++.+|+.+.++.+.
T Consensus 102 ~lg~~~l~~p~~~~~~~~~ 120 (244)
T 1vzw_A 102 NLGTAALETPEWVAKVIAE 120 (244)
T ss_dssp EECHHHHHCHHHHHHHHHH
T ss_pred EECchHhhCHHHHHHHHHH
Confidence 9999999999988887654
No 133
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.67 E-value=1.9e-07 Score=89.23 Aligned_cols=150 Identities=10% Similarity=0.095 Sum_probs=118.4
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
+..|+-..+++.+|+++++.|+.+.+.||..|-| .|+|.... ....++++...+++++||+++ ++++.|..
T Consensus 113 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDa 185 (405)
T 3rr1_A 113 DKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDF 185 (405)
T ss_dssp SCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEEC
T ss_pred CceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 4567777888899999999999888899999999 89875321 112234667788999999987 67899888
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+. ++..++++.+++.|+++|. + ..++.|++..+++++.+ ++||++.+.+.|++++
T Consensus 186 N~~~~~----~~A~~~~~~L~~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~iPIa~dE~i~~~~~~ 244 (405)
T 3rr1_A 186 HGRVSA----PMAKVLIKELEPYRPLFIE--------E--------PVLAEQAETYARLAAHT-HLPIAAGERMFSRFDF 244 (405)
T ss_dssp CSCBCH----HHHHHHHHHHGGGCCSCEE--------C--------SSCCSSTHHHHHHHTTC-SSCEEECTTCCSHHHH
T ss_pred CCCCCH----HHHHHHHHHHHhcCCCEEE--------C--------CCCcccHHHHHHHHhcC-CCCEEecCCcCCHHHH
Confidence 877764 3578899999999999883 1 11235889999999988 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCC
Q psy2386 202 DLHLNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P 221 (311)
.++++. ||.|++--+-.+..
T Consensus 245 ~~~l~~~a~d~v~~d~~~~GGi 266 (405)
T 3rr1_A 245 KRVLEAGGVSILQPDLSHAGGI 266 (405)
T ss_dssp HHHHHHCCCSEECCBTTTTTHH
T ss_pred HHHHHHhCCCeEEEChhhcCCH
Confidence 999975 99999865444433
No 134
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.66 E-value=1.6e-07 Score=84.95 Aligned_cols=162 Identities=14% Similarity=0.186 Sum_probs=97.7
Q ss_pred CeEEEecCCC--HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCccc----------CChHHHHHHHHHHhcccc
Q psy2386 47 PIAFQVGDNE--PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM----------TKPLLVSDCIKAMRDSVE 114 (311)
Q Consensus 47 p~~~Ql~g~~--~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll----------~~~~~~~~iv~~v~~~~~ 114 (311)
.++.=|...+ .+...+.++.+++. +|.|||+ =|...-..+ |.... -+.+.+.++++++|+.++
T Consensus 17 ~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG--~PfsdP~ad--Gp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~ 91 (271)
T 1ujp_A 17 ALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIG--LPYSDPLGD--GPVIQRASELALRKGMSVQGALELVREVRALTE 91 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEE--CCCCC------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred eEEEEecCCCCChHHHHHHHHHHHhc-CCEEEEC--CCCCCcccc--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 3555554444 46677778888888 9999995 444321001 00000 245667899999998888
Q ss_pred ceeEEEEeccCCCC-CcHHHHHHHHHHHHHcCCCEEEEe-------------------------cC-cc-----------
Q psy2386 115 IDITVKHRIGIDDI-NSYDFVRDFVGTVSSAGCRTFIVH-------------------------AR-NA----------- 156 (311)
Q Consensus 115 ~pvsvKiR~g~~~~-~~~~~~~e~~~~l~~~G~~~itvh-------------------------~R-t~----------- 156 (311)
+|+.+ + ++.+. ..+ ....|++.+.++|+|.+++- .- +.
T Consensus 92 ~Pii~-m--~y~n~v~~~-g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~ 167 (271)
T 1ujp_A 92 KPLFL-M--TYLNPVLAW-GPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHA 167 (271)
T ss_dssp SCEEE-E--CCHHHHHHH-CHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTC
T ss_pred CCEEE-E--ecCcHHHHh-hHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhC
Confidence 99877 3 21110 000 12456667777777765521 01 10
Q ss_pred -------ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhC
Q psy2386 157 -------FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKN 220 (311)
Q Consensus 157 -------~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~ 220 (311)
...|++|.... .+....++++++++.. ++||++.|||+|++++.++ ..||||+||+++...
T Consensus 168 ~gfiy~vs~~G~TG~~~~-~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t~e~a~~~-~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 168 TGFVYAVSVTGVTGMRER-LPEEVKDLVRRIKART-ALPVAVGFGVSGKATAAQA-AVADGVVVGSALVRA 235 (271)
T ss_dssp CSCEEEECC-------------CCHHHHHHHHTTC-CSCEEEESCCCSHHHHHHH-TTSSEEEECHHHHHH
T ss_pred CCCEEEEecCcccCCCCC-CCccHHHHHHHHHhhc-CCCEEEEcCCCCHHHHHHh-cCCCEEEEChHHhcc
Confidence 01234444222 2233468899999987 8999999999999999998 669999999998654
No 135
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.66 E-value=1.1e-07 Score=90.05 Aligned_cols=131 Identities=12% Similarity=0.118 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
+++++++.|+.+.+.||+.|.|++||+ | .+++...++++++|+++ ++++.|...-+|++ .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d---~~~ 209 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHT---CGH 209 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCS---HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HHH
Confidence 349999999998888999999999986 1 25788889999999986 67899998888883 235
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 211 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgV 211 (311)
..++++.+++.|+++|- + ..++.|++..+++++.. ++||.+.+.+.+++++.++++. +|.|
T Consensus 210 A~~~~~~l~~~~i~~iE--------q--------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v 272 (374)
T 3sjn_A 210 SAMMAKRLEEFNLNWIE--------E--------PVLADSLISYEKLSRQV-SQKIAGGESLTTRYEFQEFITKSNADIV 272 (374)
T ss_dssp HHHHHHHSGGGCCSEEE--------C--------SSCTTCHHHHHHHHHHC-SSEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHhhhcCceEEE--------C--------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 68899999999999883 1 12235899999999998 7999999999999999999975 9999
Q ss_pred EEehhhhh
Q psy2386 212 MLGREAYK 219 (311)
Q Consensus 212 migRa~l~ 219 (311)
++--+-.+
T Consensus 273 ~~k~~~~G 280 (374)
T 3sjn_A 273 QPDITRCG 280 (374)
T ss_dssp CCBTTTSS
T ss_pred EeCccccC
Confidence 98654443
No 136
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.65 E-value=1.3e-07 Score=90.96 Aligned_cols=131 Identities=14% Similarity=0.119 Sum_probs=106.6
Q ss_pred CCCH-HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCc
Q psy2386 54 DNEP-KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINS 130 (311)
Q Consensus 54 g~~~-~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~ 130 (311)
..+| +.++++|+.+.+.||+.|.|+.|+ +++...++++++|+++ ++++.+...-+|+.
T Consensus 182 ~~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~--- 242 (428)
T 3bjs_A 182 GYQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYTM--- 242 (428)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH---
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH---
Confidence 3678 999999999988999999999776 4677789999999987 57888887777754
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC-CeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~-ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++..++++.+++.|+++|- +- .++.|++..+++++.+ + +||++.+.+.|++++.++++.
T Consensus 243 -~eai~~~~~L~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~~iPIa~dE~~~~~~~~~~~i~~~~ 304 (428)
T 3bjs_A 243 -ADARRVLPVLAEIQAGWLE--------EP--------FACNDFASYREVAKIT-PLVPIAAGENHYTRFEFGQMLDAGA 304 (428)
T ss_dssp -HHHHHHHHHHHHTTCSCEE--------CC--------SCTTCHHHHHHHTTTC-SSSCEEECTTCCSHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHHhcCCCEEE--------CC--------CCccCHHHHHHHHHhC-CCCcEEcCCCcCCHHHHHHHHHhCC
Confidence 3578999999999999873 11 1235899999999987 7 999999999999999999975
Q ss_pred cCEEEEehhhhhCC
Q psy2386 208 IDGVMLGREAYKNP 221 (311)
Q Consensus 208 adgVmigRa~l~~P 221 (311)
+|.|++=-.-.+..
T Consensus 305 ~d~v~ik~~~~GGi 318 (428)
T 3bjs_A 305 VQVWQPDLSKCGGI 318 (428)
T ss_dssp EEEECCBTTTSSCH
T ss_pred CCEEEeCccccCCH
Confidence 99999854444443
No 137
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.64 E-value=6e-07 Score=85.13 Aligned_cols=149 Identities=10% Similarity=0.123 Sum_probs=119.4
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
..|+...+...+|+.+++.++...+. ||..|-+..|++ +++.-.+++++||+++ ++++.|+.
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDa 201 (383)
T 3i4k_A 137 KVDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDI 201 (383)
T ss_dssp EEEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEEC
T ss_pred eEEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 34566677888999998888766555 999999998873 4566678899999987 57899999
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+. ++..++++.+++.|+++|. + ..++.|++..+++++.. ++||.+.+.+.+++++
T Consensus 202 n~~~~~----~~A~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 260 (383)
T 3i4k_A 202 NARWDR----RTALHYLPILAEAGVELFE--------Q--------PTPADDLETLREITRRT-NVSVMADESVWTPAEA 260 (383)
T ss_dssp TTCSCH----HHHHHHHHHHHHTTCCEEE--------S--------CSCTTCHHHHHHHHHHH-CCEEEESTTCSSHHHH
T ss_pred CCCCCH----HHHHHHHHHHHhcCCCEEE--------C--------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHH
Confidence 888874 3568899999999999883 1 12235899999999987 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.++++. ||.|++--+-.+...-..++.+
T Consensus 261 ~~~i~~~~~d~v~~k~~~~GGit~~~~ia~ 290 (383)
T 3i4k_A 261 LAVVKAQAADVIALKTTKHGGLLESKKIAA 290 (383)
T ss_dssp HHHHHHTCCSEEEECTTTTTSHHHHHHHHH
T ss_pred HHHHHcCCCCEEEEcccccCCHHHHHHHHH
Confidence 999975 9999998777777665555543
No 138
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.64 E-value=2e-07 Score=89.11 Aligned_cols=150 Identities=11% Similarity=0.047 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc-ccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI-LMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~-Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
.+|+++++.|+.+.+.||..|.++.|+|... ..|.. ...+++...+++++||+++ ++++.|+..-+|+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~---- 221 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTI----YDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTV---- 221 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcc----cccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCH----
Confidence 5899999999888888999999999998541 12221 1234677788999999987 57888888877764
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cC
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 209 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--ad 209 (311)
++..++++.+++.|+++|.- ..++.|++..+++++.+ ++||.+.+.+.|++++.++++. ||
T Consensus 222 ~~A~~~~~~l~~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d 284 (404)
T 4e5t_A 222 SGAKRLARRLEAYDPLWFEE----------------PIPPEKPEDMAEVARYT-SIPVATGERLCTKYEFSRVLETGAAS 284 (404)
T ss_dssp HHHHHHHHHHGGGCCSEEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHhhcCCcEEEC----------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 35789999999999998831 11234899999999998 7999999999999999999975 99
Q ss_pred EEEEehhhhhCCcchHHhHh
Q psy2386 210 GVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 210 gVmigRa~l~~P~i~~~~~~ 229 (311)
.|++--+-.+...=..++.+
T Consensus 285 ~v~~d~~~~GGit~~~~ia~ 304 (404)
T 4e5t_A 285 ILQMNLGRVGGLLEAKKIAA 304 (404)
T ss_dssp EECCCTTTSSCHHHHHHHHH
T ss_pred EEecCccccCCHHHHHHHHH
Confidence 99997766666655555544
No 139
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.64 E-value=2.3e-07 Score=88.24 Aligned_cols=138 Identities=9% Similarity=-0.018 Sum_probs=111.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
+++.+.++|+.+.+.||+.|.|+.|++ +++...++++++|+++ ++++.+...-+|+. ++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~----~~ 225 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNL----ET 225 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HH
Confidence 899999999999889999999998872 4677788999999887 58888888877764 35
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHh------h
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLN------Y 207 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~------~ 207 (311)
..++++.+++.|+++|- +- .++.||+..+++++.+ ++||++.+.+.+++++.++++ .
T Consensus 226 a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~~~~ 288 (392)
T 1tzz_A 226 GIAYAKMLRDYPLFWYE--------EV--------GDPLDYALQAALAEFY-PGPMATGENLFSHQDARNLLRYGGMRPD 288 (392)
T ss_dssp HHHHHHHHTTSCCSEEE--------CC--------SCTTCHHHHHHHTTTC-CSCEEECTTCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHcCCCeec--------CC--------CChhhHHHHHHHHhhC-CCCEEECCCCCCHHHHHHHHHcCCCccC
Confidence 78999999999999873 11 1235899999999988 799999999999999999996 5
Q ss_pred cCEEEEehhhhhCCcchHHhHh
Q psy2386 208 IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 208 adgVmigRa~l~~P~i~~~~~~ 229 (311)
||.|++--.-.+...=..++.+
T Consensus 289 ~d~v~ik~~~~GGit~~~~i~~ 310 (392)
T 1tzz_A 289 RDWLQFDCALSYGLCEYQRTLE 310 (392)
T ss_dssp TCEECCCTTTTTCHHHHHHHHH
T ss_pred CcEEEECccccCCHHHHHHHHH
Confidence 9999997666555544444443
No 140
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.62 E-value=2.4e-07 Score=80.59 Aligned_cols=146 Identities=11% Similarity=0.075 Sum_probs=102.5
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCcccc---------ccCcccCcccCChHHHHHH----------
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRV---------QNGFFGAILMTKPLLVSDC---------- 105 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v---------~~~~~G~~Ll~~~~~~~~i---------- 105 (311)
+.|+++-+-+.+++++.+.++.+.+.|++.|++++-+|.... ...++|. ++ +.+.+...
T Consensus 12 ~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~ 89 (207)
T 2yw3_A 12 ESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVS 89 (207)
T ss_dssp HHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEE
T ss_pred hCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEc
Confidence 468999999999999999999999999999999998885532 1224454 32 33443333
Q ss_pred -------HHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHH
Q psy2386 106 -------IKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVY 178 (311)
Q Consensus 106 -------v~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~ 178 (311)
++..++ .++|+..-+. + ..+ +..+.+.|+|+|.+++-.. .. -.++++
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~G~~-------t---~~e-~~~A~~~Gad~v~~fpa~~-~g-------------G~~~lk 143 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLPGVL-------T---PTE-VERALALGLSALKFFPAEP-FQ-------------GVRVLR 143 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEEEEC-------S---HHH-HHHHHHTTCCEEEETTTTT-TT-------------HHHHHH
T ss_pred CCCCHHHHHHHHH-hCCCEEecCC-------C---HHH-HHHHHHCCCCEEEEecCcc-cc-------------CHHHHH
Confidence 233322 3444433211 1 123 4555678999999975210 00 357789
Q ss_pred HHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh
Q psy2386 179 NLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 179 ~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~ 219 (311)
+++..+|++||++.|||+ ++++.++++. +++|.+|++++.
T Consensus 144 ~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 144 AYAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 999888789999999997 7999999987 999999999876
No 141
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.62 E-value=8.2e-08 Score=84.81 Aligned_cols=88 Identities=13% Similarity=0.155 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
++.++++.+++.|+++|+++..+.. +. ..+.+++.++++++.+ ++||+++|+|.+++++.++++. ||+|
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~--~~-------~~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V 103 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAA--PE-------GRATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKV 103 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCC--TT-------THHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcc--cc-------CCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 3578999999999999999866531 10 1124678899999998 8999999999999999998876 9999
Q ss_pred EEehhhhhCCcchHHhHhh
Q psy2386 212 MLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 212 migRa~l~~P~i~~~~~~~ 230 (311)
++|+.++.+|+++.++.+.
T Consensus 104 ~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 104 SVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp EESHHHHHCTHHHHHHHHH
T ss_pred EEChHHhhCcHHHHHHHHH
Confidence 9999999999988877654
No 142
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.62 E-value=7.6e-07 Score=84.72 Aligned_cols=154 Identities=8% Similarity=0.000 Sum_probs=121.5
Q ss_pred CCCCeEEEec---CCCHHHHHHHH-HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--ccee
Q psy2386 44 EEHPIAFQVG---DNEPKKLAKSA-KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDI 117 (311)
Q Consensus 44 ~~~p~~~Ql~---g~~~~~~~~aa-~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pv 117 (311)
+..|+-..+. ..+|+++++.+ +...+.||..|-+..|++.+. ...+++.-.++++++|+++ ++++
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l 194 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVI 194 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCE
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeE
Confidence 3456667663 36899999988 887778999999999997542 3467888889999999987 6899
Q ss_pred EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCC
Q psy2386 118 TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT 197 (311)
Q Consensus 118 svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s 197 (311)
.|...-+|+. ++..++++.+++.|+++|- + ..++.|++..+++++.. ++||.+.+.+.+
T Consensus 195 ~vDaN~~~~~----~~A~~~~~~L~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~ 253 (393)
T 4dwd_A 195 GFDANNGYSV----GGAIRVGRALEDLGYSWFE--------E--------PVQHYHVGAMGEVAQRL-DITVSAGEQTYT 253 (393)
T ss_dssp EEECTTCCCH----HHHHHHHHHHHHTTCSEEE--------C--------CSCTTCHHHHHHHHHHC-SSEEEBCTTCCS
T ss_pred EEECCCCCCH----HHHHHHHHHHHhhCCCEEE--------C--------CCCcccHHHHHHHHhhC-CCCEEecCCcCC
Confidence 9998888874 3578999999999999883 1 11235899999999998 799999999999
Q ss_pred HHHHHHHHhh-cCEEEEehhhhhCCcchHHh
Q psy2386 198 KKEIDLHLNY-IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 198 ~~da~~~l~~-adgVmigRa~l~~P~i~~~~ 227 (311)
++++.++++. +|.|++--+-.+...=..++
T Consensus 254 ~~~~~~~i~~~~d~v~~k~~~~GGit~~~~i 284 (393)
T 4dwd_A 254 LQALKDLILSGVRMVQPDIVKMGGITGMMQC 284 (393)
T ss_dssp HHHHHHHHHHTCCEECCCTTTTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccCCHHHHHHH
Confidence 9999999866 99999866555544433333
No 143
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.62 E-value=2.4e-07 Score=88.37 Aligned_cols=165 Identities=10% Similarity=0.031 Sum_probs=124.9
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccc------cCcccCccc--CChHHHHHHHHHHhccc--
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ------NGFFGAILM--TKPLLVSDCIKAMRDSV-- 113 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~------~~~~G~~Ll--~~~~~~~~iv~~v~~~~-- 113 (311)
+..|+-..+.+.+|+++++.++...+.||..|-+..|++....- ....|..+. ++++...+++++||+++
T Consensus 121 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~ 200 (401)
T 3sbf_A 121 DAIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN 200 (401)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC
Confidence 44566667788999999999998888999999999998632110 001122221 12567788899999987
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
++++.|...-+|+. ++..++++.+++.|+++|. + ..++.|++..+++++.+ ++||.+.+
T Consensus 201 d~~l~vDan~~~~~----~~A~~~~~~L~~~~i~~iE--------q--------P~~~~~~~~~~~l~~~~-~iPIa~dE 259 (401)
T 3sbf_A 201 QFHILHDVHERLFP----NQAIQFAKEVEQYKPYFIE--------D--------ILPPNQTEWLDNIRSQS-SVSLGLGE 259 (401)
T ss_dssp SSEEEEECTTCSCH----HHHHHHHHHHGGGCCSCEE--------C--------SSCTTCGGGHHHHHTTC-CCCEEECT
T ss_pred CCEEEEECCCCCCH----HHHHHHHHHHHhcCCCEEE--------C--------CCChhHHHHHHHHHhhC-CCCEEeCC
Confidence 68999998888874 3578999999999999883 1 11235788899999988 79999999
Q ss_pred CCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 194 GIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 194 gI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.+.+++++.++++. ||.|++--+-.+...=..++.+
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~ 297 (401)
T 3sbf_A 260 LFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGH 297 (401)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred ccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHH
Confidence 99999999999975 9999998777776665555543
No 144
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.61 E-value=7.3e-07 Score=87.08 Aligned_cols=128 Identities=18% Similarity=0.188 Sum_probs=90.8
Q ss_pred HHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHH
Q psy2386 61 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVG 139 (311)
Q Consensus 61 ~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~ 139 (311)
.+.++.+.+.|+|.|.+... + .+++...+.++++++.+ ++|+.++-= . ..+.++
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a-----------~----g~~~~~~~~i~~l~~~~p~~pvi~G~v---~-------t~~~a~ 289 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTA-----------H----GHSAGVLRKIAEIRAHFPNRTLIAGNI---A-------TAEGAR 289 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCS-----------C----TTCHHHHHHHHHHHHHCSSSCEEEEEE---C-------SHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeee-----------c----CcchhHHHHHHHHHHHCCCCcEeCCCc---c-------CHHHHH
Confidence 44566677789999998741 1 13445667788888887 889874411 1 136678
Q ss_pred HHHHcCCCEEEEec------CccccccCCCCcCCCCCcCcHHHHHHHHH---hCCCCeEEEecCCCCHHHHHHHHhh-cC
Q psy2386 140 TVSSAGCRTFIVHA------RNAFLKKLNPKQNRKIPILKYNFVYNLKK---DFPELEIIINGGIKTKKEIDLHLNY-ID 209 (311)
Q Consensus 140 ~l~~~G~~~itvh~------Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~---~~~~ipvi~nGgI~s~~da~~~l~~-ad 209 (311)
.+.++|++.|.+.. .+....|.. ...++.+.++.+ .. ++|||+.|||++++|+.++++. ||
T Consensus 290 ~~~~~Gad~I~vg~g~g~~~~tr~~~~~~--------~p~~~~l~~~~~~~~~~-~ipvia~GGi~~~~di~kal~~GA~ 360 (491)
T 1zfj_A 290 ALYDAGVDVVKVGIGPGSICTTRVVAGVG--------VPQVTAIYDAAAVAREY-GKTIIADGGIKYSGDIVKALAAGGN 360 (491)
T ss_dssp HHHHTTCSEEEECSSCCTTBCHHHHTCCC--------CCHHHHHHHHHHHHHHT-TCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHcCCCEEEECccCCcceEEeeecCCC--------CCcHHHHHHHHHHHhhc-CCCEEeeCCCCCHHHHHHHHHcCCc
Confidence 88999999998841 111122221 135666666665 44 7999999999999999999986 99
Q ss_pred EEEEehhhhhCCc
Q psy2386 210 GVMLGREAYKNPF 222 (311)
Q Consensus 210 gVmigRa~l~~P~ 222 (311)
+||+||+++..+.
T Consensus 361 ~v~vG~~~~~~~e 373 (491)
T 1zfj_A 361 AVMLGSMFAGTDE 373 (491)
T ss_dssp EEEESTTTTTBSS
T ss_pred ceeeCHHhhCCCc
Confidence 9999999987554
No 145
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.61 E-value=2.2e-07 Score=87.31 Aligned_cols=146 Identities=8% Similarity=0.028 Sum_probs=117.6
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-.+++..+|+.+++.++.+.+.||..|.+++|| +++.-.+.++++|+++ ++++.|+..
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 192 (356)
T 3ro6_B 129 SLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPN 192 (356)
T ss_dssp CEEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred ceeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4466678888999999999998888999999999886 3566677888998887 678999988
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+.. +..++++.+++.|+.+|- + ..++.||+..+++++.. ++||.+.+.+.+++|+.
T Consensus 193 ~~~~~~----~a~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 251 (356)
T 3ro6_B 193 QSYDRD----GLLRLDRLVQELGIEFIE--------Q--------PFPAGRTDWLRALPKAI-RRRIAADESLLGPADAF 251 (356)
T ss_dssp TCCCHH----HHHHHHHHHHHTTCCCEE--------C--------CSCTTCHHHHHTSCHHH-HHTEEESTTCCSHHHHH
T ss_pred CCCCHH----HHHHHHHHHHhcCCCEEE--------C--------CCCCCcHHHHHHHHhcC-CCCEEeCCcCCCHHHHH
Confidence 888743 567899999999999883 1 11235899999999887 69999999999999999
Q ss_pred HHHh---hcCEEEEehhhhhCCcchHHh
Q psy2386 203 LHLN---YIDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 203 ~~l~---~adgVmigRa~l~~P~i~~~~ 227 (311)
++++ .||.|++--+-.+...=..++
T Consensus 252 ~~~~~~~~~d~v~~k~~~~GGit~~~~i 279 (356)
T 3ro6_B 252 ALAAPPAACGIFNIKLMKCGGLAPARRI 279 (356)
T ss_dssp HHHSSSCSCSEEEECHHHHCSHHHHHHH
T ss_pred HHHhcCCcCCEEEEcccccCCHHHHHHH
Confidence 9997 599999987666654433333
No 146
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.60 E-value=2.1e-07 Score=89.26 Aligned_cols=164 Identities=7% Similarity=-0.022 Sum_probs=122.2
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCc----------cc-------CcccCChHHHHHHH
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGF----------FG-------AILMTKPLLVSDCI 106 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~----------~G-------~~Ll~~~~~~~~iv 106 (311)
+..|+-..+.+.+|+++++.|+...+.||..|-+..|+|.....-+. .| -...++++...+++
T Consensus 131 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v 210 (418)
T 3r4e_A 131 DGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLF 210 (418)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 44566666778999999999998888999999999999853221000 00 01112356778899
Q ss_pred HHHhccc--cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC
Q psy2386 107 KAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 184 (311)
Q Consensus 107 ~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~ 184 (311)
++||+++ ++++.|...-+|+. ++..++++.|++.|+++|. + ..++.|++..+++++.+
T Consensus 211 ~avR~a~G~d~~l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~ 270 (418)
T 3r4e_A 211 EELRKTYGFDHHLLHDGHHRYTP----QEAANLGKMLEPYQLFWLE--------D--------CTPAENQEAFRLVRQHT 270 (418)
T ss_dssp HHHHHHHCSSSEEEEECTTCSCH----HHHHHHHHHHGGGCCSEEE--------S--------CSCCSSGGGGHHHHHHC
T ss_pred HHHHHHcCCCCeEEEeCCCCCCH----HHHHHHHHHHHhhCCCEEE--------C--------CCCccCHHHHHHHHhcC
Confidence 9999987 67899988888864 3578999999999999883 1 11234788889999998
Q ss_pred CCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 185 PELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 185 ~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
++||++.+.+.|++++.++++. ||.|++--+-.+...=..++.
T Consensus 271 -~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia 315 (418)
T 3r4e_A 271 -VTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIA 315 (418)
T ss_dssp -CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred -CCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHH
Confidence 7999999999999999999975 999999766655554444444
No 147
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.58 E-value=7.2e-07 Score=83.66 Aligned_cols=147 Identities=11% Similarity=0.095 Sum_probs=117.6
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEec
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRI 123 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~ 123 (311)
.|+...+...+|+.+++.++...+.||..|.++.|++ ++.-.++++++|+++ ++++.|...-
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~ 192 (354)
T 3jva_A 129 VITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQ 192 (354)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 3444667778999999999888889999999998874 344567888888876 5788898888
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+. ++..++++.+++.|+++|. + ..++.|++..+++++.. ++||.+.+.+.+++++.+
T Consensus 193 ~~~~----~~a~~~~~~L~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ 251 (354)
T 3jva_A 193 AWTP----KDAVKAIQALADYQIELVE--------Q--------PVKRRDLEGLKYVTSQV-NTTIMADESCFDAQDALE 251 (354)
T ss_dssp CSCH----HHHHHHHHHTTTSCEEEEE--------C--------CSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHH
T ss_pred CCCH----HHHHHHHHHHHhcCCCEEE--------C--------CCChhhHHHHHHHHHhC-CCCEEEcCCcCCHHHHHH
Confidence 8864 3567899999999988883 1 11235899999999998 799999999999999999
Q ss_pred HHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 204 HLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 204 ~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+++. +|.|++--+-.+...=..++.+
T Consensus 252 ~l~~~~~d~v~~k~~~~GGit~~~~i~~ 279 (354)
T 3jva_A 252 LVKKGTVDVINIKLMKCGGIHEALKINQ 279 (354)
T ss_dssp HHHHTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred HHHcCCCCEEEECchhcCCHHHHHHHHH
Confidence 9975 9999998888777765555544
No 148
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.57 E-value=1e-06 Score=79.85 Aligned_cols=139 Identities=17% Similarity=0.117 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEE--eccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec--cCCCCCc
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEIN--LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI--GIDDINS 130 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~Id--iN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~--g~~~~~~ 130 (311)
...+.-..-++.+.+.|+|.|| || .|+.+-.+.+.+.+-+.+|++.++-| .+|+=+ +.-.
T Consensus 123 ~~~~~Kv~Ea~~Ai~~GAdEIDmVIN------------ig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt--- 186 (288)
T 3oa3_A 123 YSTDQKVSEAKRAMQNGASELDMVMN------------YPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLT--- 186 (288)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC------------HHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCC---
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEee------------hhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCC---
Confidence 3444445455667788999999 56 44444567888898899999988666 366543 3222
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-c
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-I 208 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-a 208 (311)
.++....++...++|+|+|--. .||++. .. .+.|.+.++++.+.. ++++|.+.|||+|.+|+.++++. |
T Consensus 187 ~eei~~A~~ia~eaGADfVKTS------TGf~~~--GA-T~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA 257 (288)
T 3oa3_A 187 ADEIIAGCVLSSLAGADYVKTS------TGFNGP--GA-SIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGA 257 (288)
T ss_dssp HHHHHHHHHHHHHTTCSEEECC------CSSSSC--CC-CHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEcC------CCCCCC--CC-CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCC
Confidence 2356677888889999999543 233211 00 112555666665421 36999999999999999999987 9
Q ss_pred C--EEEEehhhh
Q psy2386 209 D--GVMLGREAY 218 (311)
Q Consensus 209 d--gVmigRa~l 218 (311)
+ |+..|+.++
T Consensus 258 ~RiGtS~g~~I~ 269 (288)
T 3oa3_A 258 ERLGASAGVKIV 269 (288)
T ss_dssp SEEEESCHHHHH
T ss_pred ceeehhhHHHHH
Confidence 9 555555543
No 149
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.55 E-value=5.2e-07 Score=86.38 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc-ccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI-LMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~-Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
.+|+++++.|+.+.+.||..|-++.|+|... ..|.. ...+++...+++++||+++ ++++.|...-+|+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~---- 214 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVP---- 214 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----
Confidence 5899999999988888999999999988542 11211 1123677788999999987 57888888777764
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cC
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 209 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--ad 209 (311)
++..++++.+++.|+++|.- ..++.|++..+++++.+ ++||.+.+.+.|++++.++++. +|
T Consensus 215 ~~A~~~~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d 277 (412)
T 4e4u_A 215 SSAIRLAKRLEKYDPLWFEE----------------PVPPGQEEAIAQVAKHT-SIPIATGERLTTKYEFHKLLQAGGAS 277 (412)
T ss_dssp HHHHHHHHHHGGGCCSEEEC----------------CSCSSCHHHHHHHHHTC-SSCEEECTTCCHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhhhcCCcEEEC----------------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHHHHHHcCCCC
Confidence 35788999999999998831 11235899999999998 7999999999999999999975 99
Q ss_pred EEEEehhhhhCCcchHHhHh
Q psy2386 210 GVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 210 gVmigRa~l~~P~i~~~~~~ 229 (311)
.|++--+-.+...=..++.+
T Consensus 278 ~v~~d~~~~GGit~~~kia~ 297 (412)
T 4e4u_A 278 ILQLNVARVGGLLEAKKIAT 297 (412)
T ss_dssp EECCCTTTTTSHHHHHHHHH
T ss_pred EEEeCccccCCHHHHHHHHH
Confidence 99997666666554445443
No 150
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.54 E-value=8.8e-07 Score=78.62 Aligned_cols=148 Identities=12% Similarity=0.100 Sum_probs=100.2
Q ss_pred HHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE------EeccCCCC----Cc
Q psy2386 61 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK------HRIGIDDI----NS 130 (311)
Q Consensus 61 ~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK------iR~g~~~~----~~ 130 (311)
.++++.+.+.|+|.|+|..+ .--+.+.+.++++++|+ .++|+.+= +..|.|.- -.
T Consensus 23 ~~~~~~l~~~GaD~ielG~S--------------~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdLp 87 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGS--------------DGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSVL 87 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEET
T ss_pred HHHHHHHHHcCCCEEEECCC--------------CCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEcccC
Confidence 34467778899999999861 12356779999999998 78998751 11222200 00
Q ss_pred HHHHHHH-----HHHHHHcC-----CCEEE----E-ecCcc------------------c-cc------cC-----CCCc
Q psy2386 131 YDFVRDF-----VGTVSSAG-----CRTFI----V-HARNA------------------F-LK------KL-----NPKQ 165 (311)
Q Consensus 131 ~~~~~e~-----~~~l~~~G-----~~~it----v-h~Rt~------------------~-~~------G~-----~g~~ 165 (311)
+++..++ ...+.+.| .+.|- + ++.+. + .. ++ +|.
T Consensus 88 ~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s~G~- 166 (240)
T 1viz_A 88 NSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSGV- 166 (240)
T ss_dssp TBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTTS-
T ss_pred cccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeCCCc-
Confidence 0011233 45677888 77664 3 22110 0 00 11 221
Q ss_pred CCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhCCc-chHHhHh
Q psy2386 166 NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPF-LMSNFDL 229 (311)
Q Consensus 166 ~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~P~-i~~~~~~ 229 (311)
+.+.++++++++.++++||+..|||+|+++++++++.||+|.+|+++..+|. ++++++.
T Consensus 167 -----~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~gAd~VIVGSa~v~~~~~~~~~v~~ 226 (240)
T 1viz_A 167 -----LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALKTVAA 226 (240)
T ss_dssp -----CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHTTCSEEEECTHHHHCHHHHHTHHHH
T ss_pred -----cChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHhCCCEEEEChHHHhCHHHHHHHHHH
Confidence 3578999999998646999999999999999999888999999999999999 8888653
No 151
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.54 E-value=1.7e-06 Score=77.92 Aligned_cols=146 Identities=13% Similarity=0.096 Sum_probs=94.2
Q ss_pred CCCeEEEecC-CCHHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEE
Q psy2386 45 EHPIAFQVGD-NEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 120 (311)
Q Consensus 45 ~~p~~~Ql~g-~~~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvK 120 (311)
..+++.+..+ .++++....++.+.++ |.+.|.++.- | +. -.+ ++...++++.+++.+ ++.+..-
T Consensus 65 ~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~-~------d~--~~~---~~e~~~~~~~a~~~~~~g~~vi~~ 132 (264)
T 1xm3_A 65 KYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVI-G------CS--RSL---LPDPVETLKASEQLLEEGFIVLPY 132 (264)
T ss_dssp GSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCB-C------CT--TTC---CBCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeec-C------CC--ccc---ccchHHHHHHHHHHHCCCeEEEEE
Confidence 3567778877 7888877777778776 4567776641 1 00 001 123446666666643 3333211
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 121 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
- .. + .+.++.+++.|+++|...+.. .|.. .+..+++.++++++.. ++||++-|||.+++|
T Consensus 133 -~--~~--~-----~~~a~~~~~~gad~v~~~~~~------~Gt~---~~~~~~~~l~~i~~~~-~iPviv~gGI~t~ed 192 (264)
T 1xm3_A 133 -T--SD--D-----VVLARKLEELGVHAIMPGASP------IGSG---QGILNPLNLSFIIEQA-KVPVIVDAGIGSPKD 192 (264)
T ss_dssp -E--CS--C-----HHHHHHHHHHTCSCBEECSSS------TTCC---CCCSCHHHHHHHHHHC-SSCBEEESCCCSHHH
T ss_pred -c--CC--C-----HHHHHHHHHhCCCEEEECCcc------cCCC---CCCCCHHHHHHHHhcC-CCCEEEEeCCCCHHH
Confidence 1 11 1 245788899999999331221 1110 0113578899999876 899999999999999
Q ss_pred HHHHHhh-cCEEEEehhhhhCCc
Q psy2386 201 IDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 201 a~~~l~~-adgVmigRa~l~~P~ 222 (311)
+.++++. ||||+||++++..+.
T Consensus 193 a~~~~~~GAdgViVGSAi~~a~d 215 (264)
T 1xm3_A 193 AAYAMELGADGVLLNTAVSGADD 215 (264)
T ss_dssp HHHHHHTTCSEEEESHHHHTSSS
T ss_pred HHHHHHcCCCEEEEcHHHhCCCC
Confidence 9999987 999999999876544
No 152
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.53 E-value=3.8e-06 Score=74.97 Aligned_cols=146 Identities=16% Similarity=0.178 Sum_probs=113.4
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
-+.|+.-|=|.-++-+..+ +..+|+|+|=|++.+ .+.+.+.++++..++ .+..+.|-+..
T Consensus 100 v~lPvLrKDfi~~~~qi~e----a~~~GAD~ilLi~a~---------------l~~~~l~~l~~~a~~-lGl~~lvEv~~ 159 (251)
T 1i4n_A 100 TCRPILAKDFYIDTVQVKL----ASSVGADAILIIARI---------------LTAEQIKEIYEAAEE-LGMDSLVEVHS 159 (251)
T ss_dssp CCSCEEEECCCCSTHHHHH----HHHTTCSEEEEEGGG---------------SCHHHHHHHHHHHHT-TTCEEEEEECS
T ss_pred CCCCEEEeeCCCCHHHHHH----HHHcCCCEEEEeccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 4679999989888876554 457899999999543 233678888888777 58888786652
Q ss_pred cCCCCCcHHHHHHHHHHHHHc-CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSA-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~-G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da 201 (311)
.+=++++.+. |++.|-++.|. +.++ ..|++...++.+.+| ++++|+-|||.|++|+
T Consensus 160 -----------~eE~~~A~~l~g~~iIGinnr~--l~t~---------~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv 217 (251)
T 1i4n_A 160 -----------REDLEKVFSVIRPKIIGINTRD--LDTF---------EIKKNVLWELLPLVPDDTVVVAESGIKDPREL 217 (251)
T ss_dssp -----------HHHHHHHHTTCCCSEEEEECBC--TTTC---------CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGH
T ss_pred -----------HHHHHHHHhcCCCCEEEEeCcc--cccC---------CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHH
Confidence 1225667888 99999999986 3332 257888888888776 4899999999999999
Q ss_pred HHHHhhcCEEEEehhhhhCCcchHHhHhhh
Q psy2386 202 DLHLNYIDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 202 ~~~l~~adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
.++.+.+|+|.||.+++..+..-..+++.+
T Consensus 218 ~~~~~~a~avLVG~aimr~~d~~~~~~~l~ 247 (251)
T 1i4n_A 218 KDLRGKVNAVLVGTSIMKAENPRRFLEEMR 247 (251)
T ss_dssp HHHTTTCSEEEECHHHHHCSSHHHHHHHHH
T ss_pred HHHHHhCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 999866999999999999888777666543
No 153
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.52 E-value=5.3e-07 Score=87.01 Aligned_cols=127 Identities=12% Similarity=0.078 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
+.++++++++|+.+.+.||+.|.|+.|+ +++...+++++||+++ ++++.+...-+|+.
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~---- 255 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDV---- 255 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----
Confidence 4589999999999999999999999773 3677788899999987 57888887777754
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cC
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 209 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--ad 209 (311)
++..++++.+++.|+++|- +- .++.|++..+++++.+..+||++.+.+.+++++.++++. ||
T Consensus 256 ~~a~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 319 (441)
T 2hxt_A 256 GPAIDWMRQLAEFDIAWIE--------EP--------TSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVD 319 (441)
T ss_dssp HHHHHHHHTTGGGCCSCEE--------CC--------SCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHhcCCCeee--------CC--------CCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 3578999999999999872 10 123589999999988624999999999999999999975 99
Q ss_pred EEEEehh
Q psy2386 210 GVMLGRE 216 (311)
Q Consensus 210 gVmigRa 216 (311)
.|++--.
T Consensus 320 ~v~ik~~ 326 (441)
T 2hxt_A 320 LIQIDAA 326 (441)
T ss_dssp EECCCTT
T ss_pred EEEeCcc
Confidence 9998543
No 154
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.49 E-value=2.2e-07 Score=83.28 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
++.++++.+++.|++.|.++..+.. ... ...+++.++++++.+ ++||+++|||.+++++.++++. ||+|
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~-~~~--------~g~~~~~i~~i~~~~-~iPvi~~ggi~~~~~i~~~~~~Gad~v 100 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRD-GTK--------SGYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADKA 100 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTS-SCS--------SCCCHHHHHHHGGGC-CSCEEEESCCCSTHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcc-cCC--------CcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCcHh
Confidence 3679999999999999999766531 111 124789999999987 8999999999999999999977 9999
Q ss_pred EEehhhh-h--CCcchHHhHh
Q psy2386 212 MLGREAY-K--NPFLMSNFDL 229 (311)
Q Consensus 212 migRa~l-~--~P~i~~~~~~ 229 (311)
++|++++ . +|..+.++.+
T Consensus 101 ~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 101 LAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp ECCCCC------CHHHHHHCC
T ss_pred hhhHHHHhCCCCHHHHHHHHH
Confidence 9999999 5 8998888754
No 155
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.48 E-value=1e-06 Score=82.85 Aligned_cols=129 Identities=13% Similarity=0.108 Sum_probs=100.9
Q ss_pred CCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 46 HPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 46 ~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
.|+...++. .+++.+.++|+.+.+.||+.|.|+.| |+...++++++|+++ ++++.+...
T Consensus 130 ~~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan 191 (368)
T 1sjd_A 130 VPCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDAN 191 (368)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECT
T ss_pred ccceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEecc
Confidence 345455543 48999999999988899999999853 233457778888776 477777777
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+. ++ .++++.+++.|+++|- +- .++.||+..+++++.+ ++||.+.+.+.+++++.
T Consensus 192 ~~~~~----~~-~~~~~~l~~~~i~~iE--------~P--------~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 249 (368)
T 1sjd_A 192 TAYTL----GD-APQLARLDPFGLLLIE--------QP--------LEEEDVLGHAELARRI-QTPICLDESIVSARAAA 249 (368)
T ss_dssp TCCCG----GG-HHHHHTTGGGCCSEEE--------CC--------SCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHH
T ss_pred CCCCH----HH-HHHHHHHHhcCCCeEe--------CC--------CChhhHHHHHHHHHhC-CCCEEECCCcCCHHHHH
Confidence 67764 25 7889999999999873 11 1235899999999988 79999999999999999
Q ss_pred HHHhh--cCEEEEe
Q psy2386 203 LHLNY--IDGVMLG 214 (311)
Q Consensus 203 ~~l~~--adgVmig 214 (311)
++++. ||.|++=
T Consensus 250 ~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 250 DAIKLGAVQIVNIK 263 (368)
T ss_dssp HHHHTTCCSEEEEC
T ss_pred HHHHcCCCCEEEec
Confidence 99975 9999994
No 156
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.48 E-value=1.8e-06 Score=77.30 Aligned_cols=142 Identities=16% Similarity=0.217 Sum_probs=101.6
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+.|+..+=|=.|+.+..+ +..+|+|+|-|.. ..+. +.+.++++..++ .++.+.|-+..
T Consensus 106 ~lPvl~kdfI~d~~qi~~----a~~~GAD~VlL~~--------------~~l~--~~l~~l~~~a~~-lGl~~lvev~~- 163 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLEE----ARAFGASAALLIV--------------ALLG--ELTGAYLEEARR-LGLEALVEVHT- 163 (254)
T ss_dssp CSCEEEESCCCSHHHHHH----HHHTTCSEEEEEH--------------HHHG--GGHHHHHHHHHH-HTCEEEEEECS-
T ss_pred CCCEEECCcCCCHHHHHH----HHHcCCCEEEECc--------------cchH--HHHHHHHHHHHH-CCCeEEEEECC-
Confidence 567776666677776533 4578999999862 2233 567777776555 35444433331
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC----CCeEEEecCCCCHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKE 200 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~----~ipvi~nGgI~s~~d 200 (311)
..| +..+.+.|++.|-++.|.. ..+ ..|++...++.+.+| ++|+++.|||.|++|
T Consensus 164 ---------~~E-~~~a~~~gad~IGvn~~~l--~~~---------~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~d 222 (254)
T 1vc4_A 164 ---------ERE-LEIALEAGAEVLGINNRDL--ATL---------HINLETAPRLGRLARKRGFGGVLVAESGYSRKEE 222 (254)
T ss_dssp ---------HHH-HHHHHHHTCSEEEEESBCT--TTC---------CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHH
T ss_pred ---------HHH-HHHHHHcCCCEEEEccccC--cCC---------CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHH
Confidence 123 3467788999999998863 221 246777777777654 689999999999999
Q ss_pred HHHHHhhcCEEEEehhhhhCCcchHHhHh
Q psy2386 201 IDLHLNYIDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 201 a~~~l~~adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.++.+++|||.||++++..+..-..+++
T Consensus 223 v~~l~~Ga~gvlVGsAl~~~~d~~~~~~~ 251 (254)
T 1vc4_A 223 LKALEGLFDAVLIGTSLMRAPDLEAALRE 251 (254)
T ss_dssp HHTTTTTCSEEEECHHHHTSSCHHHHHHH
T ss_pred HHHHHcCCCEEEEeHHHcCCCCHHHHHHH
Confidence 99998889999999999999987766654
No 157
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.47 E-value=6.9e-07 Score=85.79 Aligned_cols=165 Identities=10% Similarity=0.026 Sum_probs=123.3
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccc------cCcccCccc--CChHHHHHHHHHHhccc--
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ------NGFFGAILM--TKPLLVSDCIKAMRDSV-- 113 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~------~~~~G~~Ll--~~~~~~~~iv~~v~~~~-- 113 (311)
+..|+-..+.+.+|+++++.++...+.||..|-+..|++..... ....|..+. ++++...+++++||+++
T Consensus 142 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~ 221 (422)
T 3tji_A 142 DAIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGW 221 (422)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCS
T ss_pred CeEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCC
Confidence 34556556778999999999998888999999999998532100 001111111 12466778899999987
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
++++.|...-+|+. ++..++++.+++.|+.+|- + ..++.|++..+++++.+ ++||.+.+
T Consensus 222 d~~L~vDaN~~~~~----~~A~~~~~~Le~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE 280 (422)
T 3tji_A 222 KLHILHDVHERLFP----QQAVQLAKQLEPFQPYFIE--------D--------ILPPQQSAWLEQVRQQS-CVPLALGE 280 (422)
T ss_dssp SSEEEEECTTCSCH----HHHHHHHHHHGGGCCSEEE--------C--------CSCGGGGGGHHHHHHHC-CCCEEECT
T ss_pred CCEEEEECCCCCCH----HHHHHHHHHHHhhCCCeEE--------C--------CCChhhHHHHHHHHhhC-CCCEEEeC
Confidence 67899988888864 3578999999999999883 1 11234788889999998 79999999
Q ss_pred CCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 194 GIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 194 gI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.+.+++++.++++. ||.|++--+-.+...-..++.+
T Consensus 281 ~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~ 318 (422)
T 3tji_A 281 LFNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAH 318 (422)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred CcCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHH
Confidence 99999999999975 9999998777777665555544
No 158
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.47 E-value=2.8e-06 Score=80.31 Aligned_cols=147 Identities=9% Similarity=0.128 Sum_probs=114.6
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
..|+-..+...+++.+.+.++...+.||..+-+..|+. +++.-.+.++++|+++ ++++.|...
T Consensus 135 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 199 (377)
T 3my9_A 135 RIPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFN 199 (377)
T ss_dssp EEEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 34566677777899988877777777999999998752 3455567788888876 578999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+..+ ..++++.+++.|+.+|- + ..++.|++..+++++.. ++||.+.+.+.+++++.
T Consensus 200 ~~~~~~~----A~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 258 (377)
T 3my9_A 200 QALTPFG----AMKILRDVDAFRPTFIE--------Q--------PVPRRHLDAMAGFAAAL-DTPILADESCFDAVDLM 258 (377)
T ss_dssp TCCCTTT----HHHHHHHHHTTCCSCEE--------C--------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHH
T ss_pred CCcCHHH----HHHHHHHHhhcCCCEEE--------C--------CCCccCHHHHHHHHHhC-CCCEEECCccCCHHHHH
Confidence 8998653 57899999999999883 1 12335899999999998 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~ 227 (311)
++++. +|.|++--+-.+...=..++
T Consensus 259 ~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 259 EVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred HHHHcCCCCEEEecccccCCHHHHHHH
Confidence 99975 99999876665554433333
No 159
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.47 E-value=2e-06 Score=81.76 Aligned_cols=147 Identities=9% Similarity=0.066 Sum_probs=118.1
Q ss_pred CCCeEEEec----CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeE
Q psy2386 45 EHPIAFQVG----DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDIT 118 (311)
Q Consensus 45 ~~p~~~Ql~----g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvs 118 (311)
..|+-..++ ..+|+.+++.|+.+.+.||+.|.+++|| +++.-.+.++++|+++ ++++.
T Consensus 127 ~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~ 190 (391)
T 3gd6_A 127 KIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIK 190 (391)
T ss_dssp EEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEE
T ss_pred eEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEE
Confidence 456667777 7889999999998888899999999886 2455677888888886 57888
Q ss_pred -EEEeccCCCCCcHHHHHHHHHHHHHcCC--CEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC
Q psy2386 119 -VKHRIGIDDINSYDFVRDFVGTVSSAGC--RTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 195 (311)
Q Consensus 119 -vKiR~g~~~~~~~~~~~e~~~~l~~~G~--~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI 195 (311)
|...-+|+. ++..++++.+++.|+ .+|. + ..++.|++..+++++.+ ++|| .+.+
T Consensus 191 ~vDan~~~~~----~~A~~~~~~l~~~~i~~~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPI--dE~~ 247 (391)
T 3gd6_A 191 SYDFSHLLNW----KDAHRAIKRLTKYDLGLEMIE--------S--------PAPRNDFDGLYQLRLKT-DYPI--SEHV 247 (391)
T ss_dssp EEECTTCSCH----HHHHHHHHHHTTCCSSCCEEE--------C--------CSCTTCHHHHHHHHHHC-SSCE--EEEC
T ss_pred EecCCCCcCH----HHHHHHHHHHHhcCCCcceec--------C--------CCChhhHHHHHHHHHHc-CCCc--CCCC
Confidence 888777864 357889999999999 7773 1 11235899999999998 7999 8899
Q ss_pred CCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhh
Q psy2386 196 KTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLN 230 (311)
Q Consensus 196 ~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~ 230 (311)
.+++++.++++. ||.|++--+-.+...-..++.+.
T Consensus 248 ~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~ 284 (391)
T 3gd6_A 248 WSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYA 284 (391)
T ss_dssp CCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHH
Confidence 999999999975 99999998888887766665543
No 160
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.46 E-value=1.8e-06 Score=77.09 Aligned_cols=139 Identities=19% Similarity=0.121 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEeccCCCCCcHHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g~~~~~~~~~~ 134 (311)
.++.-+.-++.+.+.|+|.||+-+ ..|+.+-.+.+.+.+=+.++++.++ .|+-|=+-.+.-. .++.
T Consensus 109 ~~~~Kv~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt---~eei 175 (260)
T 3r12_A 109 ETRTKAHEAIFAVESGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLD---TEEK 175 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCC---HHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCC---HHHH
Confidence 445444455667778999999741 1455455688888888889988874 4543333444222 2356
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cC--E
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-ID--G 210 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-ad--g 210 (311)
...++...++|+|+|--. .||++ +.+..+.++-+++.+ ++++|-++|||+|.+|+.++++. |+ |
T Consensus 176 ~~A~~ia~eaGADfVKTS------TGf~~------~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 176 IAACVISKLAGAHFVKTS------TGFGT------GGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIG 243 (260)
T ss_dssp HHHHHHHHHTTCSEEECC------CSSSS------CCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCcCEEEcC------CCCCC------CCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceee
Confidence 777888899999999544 23321 124555555555543 36999999999999999999987 99 6
Q ss_pred EEEehhhhh
Q psy2386 211 VMLGREAYK 219 (311)
Q Consensus 211 VmigRa~l~ 219 (311)
+..|+.++.
T Consensus 244 tS~g~~I~~ 252 (260)
T 3r12_A 244 TSSGVKIVQ 252 (260)
T ss_dssp ESCHHHHHH
T ss_pred cchHHHHHH
Confidence 666665543
No 161
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.46 E-value=3e-06 Score=74.38 Aligned_cols=159 Identities=16% Similarity=0.192 Sum_probs=102.3
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEecc--CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~--gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
++..|.+.|+..+.+.++.+.+.|+|.|++.+ |.=.++. ....++++++++.++.|+.+-+-+
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~-------------~~~~~~i~~l~~~~~~~~~v~l~v-- 77 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-------------TIGPLVVDSLRPITDLPLDVHLMI-- 77 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-------------CCCHHHHHHHGGGCCSCEEEEEES--
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCccccc-------------ccCHHHHHHHHhccCCcEEEEEEe--
Confidence 67788899999999999999999999888863 2111111 111356677777766676665433
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecC--cc--------cc--cc------C---CCCc------------------C
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHAR--NA--------FL--KK------L---NPKQ------------------N 166 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~R--t~--------~~--~G------~---~g~~------------------~ 166 (311)
.+ ..++++.+.++|+|.|++|+- .. .. .| . ++.+ .
T Consensus 78 nd------~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~p 151 (230)
T 1rpx_A 78 VE------PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNP 151 (230)
T ss_dssp SS------HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCT
T ss_pred cC------HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcC
Confidence 22 135677778899999998876 20 00 00 0 0000 0
Q ss_pred CC-CCcCcH---HHHHHHHHhCC----CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhH
Q psy2386 167 RK-IPILKY---NFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 167 ~~-~~~~~~---~~i~~i~~~~~----~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~ 228 (311)
.. ....+| +.++++++..+ ++|+++.|||+ ++.+.++++. +|+|.+||+++..+.....++
T Consensus 152 g~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~ 221 (230)
T 1rpx_A 152 GFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDYAEAIK 221 (230)
T ss_dssp TCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCHHHHHH
Confidence 00 011233 45566666542 68999999999 7888888875 999999999998776544433
No 162
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.45 E-value=5.5e-06 Score=72.97 Aligned_cols=151 Identities=14% Similarity=0.226 Sum_probs=105.7
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCC--EEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc--ccceeEEEEe
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYD--EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS--VEIDITVKHR 122 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d--~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~--~~~pvsvKiR 122 (311)
.+..+|...|...+.++.+.+++.|+| .+|+=-|.=+||.+ +| | ++++++|+. .++|+.|++-
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~---~G------~----~~v~~ir~~~~~~~~~dvhLm 72 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT---FG------H----PVVESLRKQLGQDPFFDMHMM 72 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC---BC------H----HHHHHHHHHHCSSSCEEEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc---cC------H----HHHHHHHHhhCCCCcEEEEEE
Confidence 367889999999999999999999998 55655443233322 22 2 456777776 4788888877
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc--------------------------------c------------c
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------------------------------F------------L 158 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~--------------------------------~------------~ 158 (311)
+. +. ..+++.+.++|+|.||+|.-.. . .
T Consensus 73 v~--~p------~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~ 144 (228)
T 3ovp_A 73 VS--KP------EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVE 144 (228)
T ss_dssp CS--CG------GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSC
T ss_pred eC--CH------HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeec
Confidence 52 21 2456777889999999984210 0 0
Q ss_pred ccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 159 KKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 159 ~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
.|+.|. .. .+..++.++++++..+++++..-|||+ ++.+.++.+. ||.+.+||++++.+.
T Consensus 145 pGf~Gq--~f-~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a~d 205 (228)
T 3ovp_A 145 PGFGGQ--KF-MEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRSED 205 (228)
T ss_dssp TTTCSC--CC-CGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTCSC
T ss_pred CCCCCc--cc-CHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 122221 11 123467788998887679999999995 8999999876 999999999876554
No 163
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.45 E-value=7.2e-07 Score=84.88 Aligned_cols=125 Identities=10% Similarity=0.032 Sum_probs=103.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
|.+|+++++.|+.+.+.||+.|.|+.|+ +++.-.+.++++|+++ ++++.|...-+|+..
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~--- 213 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDLP--- 213 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHH---
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHH---
Confidence 5558999999998888999999999774 4566778899999987 678999988888743
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc-HHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--c
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--I 208 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~-~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--a 208 (311)
+..++++.+++.|+++|- + ..++.| ++..+++++.. ++||.+.+.+.+++++.++++. +
T Consensus 214 -~A~~~~~~L~~~~i~~iE--------e--------P~~~~d~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 275 (392)
T 3ddm_A 214 -RARQMAQRLGPAQLDWLE--------E--------PLRADRPAAEWAELAQAA-PMPLAGGENIAGVAAFETALAARSL 275 (392)
T ss_dssp -HHHHHHHHHGGGCCSEEE--------C--------CSCTTSCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHHTCE
T ss_pred -HHHHHHHHHHHhCCCEEE--------C--------CCCccchHHHHHHHHHhc-CCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 568899999999999883 1 122357 89999999998 7999999999999999999975 9
Q ss_pred CEEEEeh
Q psy2386 209 DGVMLGR 215 (311)
Q Consensus 209 dgVmigR 215 (311)
|.|++--
T Consensus 276 d~v~~k~ 282 (392)
T 3ddm_A 276 RVMQPDL 282 (392)
T ss_dssp EEECCCT
T ss_pred CEEEeCc
Confidence 9999853
No 164
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.43 E-value=2.9e-06 Score=79.96 Aligned_cols=145 Identities=14% Similarity=0.187 Sum_probs=114.5
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEecc
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG 124 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g 124 (311)
|.-..+...+|+.+++.++...+.||..|-+..|+. ++.-.++++++|+++ ++++.|...-+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~----------------~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGGS----------------KELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecCC----------------HHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 555678888999999999888888999999997752 455567888898887 57888888777
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 204 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~ 204 (311)
|+. ++..++++.+++.|+++|- + ..++.|++..+++++.. ++||.+.+.+.+++++.++
T Consensus 195 ~~~----~~A~~~~~~l~~~~i~~iE--------q--------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~ 253 (368)
T 3q45_A 195 WSV----ETAIETLTLLEPYNIQHCE--------E--------PVSRNLYTALPKIRQAC-RIPIMADESCCNSFDAERL 253 (368)
T ss_dssp BCH----HHHHHHHHHHGGGCCSCEE--------C--------CBCGGGGGGHHHHHHTC-SSCEEESTTCCSHHHHHHH
T ss_pred CCh----HHHHHHHHHHhhcCCCEEE--------C--------CCChhHHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHH
Confidence 764 3567899999999999883 1 11234788889999988 7999999999999999999
Q ss_pred Hhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 205 LNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 205 l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
++. +|.|++--+-.+...=..++.
T Consensus 254 ~~~~~~d~v~~k~~~~GGit~~~~i~ 279 (368)
T 3q45_A 254 IQIQACDSFNLKLSKSAGITNALNII 279 (368)
T ss_dssp HHTTCCSEEEECTTTTTSHHHHHHHH
T ss_pred HHcCCCCeEEechhhcCCHHHHHHHH
Confidence 975 999999766666554444443
No 165
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.43 E-value=5.5e-06 Score=72.79 Aligned_cols=144 Identities=15% Similarity=0.195 Sum_probs=97.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+.|+.+-|+.+||+.+.+ .+.++|+|+|-++.+.+ ++.+.+.++.+++. ++.+.+-+...
T Consensus 64 ~~~~~v~lmv~d~~~~i~---~~~~agad~v~vH~~~~----------------~~~~~~~~~~i~~~-g~~igv~~~p~ 123 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVE---PLAKAGASGFTFHIEVS----------------RDNWQELIQSIKAK-GMRPGVSLRPG 123 (228)
T ss_dssp CSEEEEEEESSCGGGGHH---HHHHHTCSEEEEEGGGC----------------TTTHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCcEEEEEEecCHHHHHH---HHHHcCCCEEEECCCCc----------------ccHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 468999999999987744 34457999999994321 12224566666654 66666544332
Q ss_pred CCCCCcHHHHHHHHHHHHHc--CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSA--GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~--G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
.+ .+.++.+.+. ++|+|.+.+... |++|. .-.+..++.++++++..+++||++-|||+. +.+.
T Consensus 124 t~--------~e~~~~~~~~~~~~d~vl~~sv~p---g~~g~---~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~ 188 (228)
T 1h1y_A 124 TP--------VEEVFPLVEAENPVELVLVMTVEP---GFGGQ---KFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STID 188 (228)
T ss_dssp SC--------GGGGHHHHHSSSCCSEEEEESSCT---TCSSC---CCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHH
T ss_pred CC--------HHHHHHHHhcCCCCCEEEEEeecC---CCCcc---cCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHH
Confidence 11 2334555665 899998865532 33321 112234577888888765799999999997 8888
Q ss_pred HHHhh-cCEEEEehhhhhCCcc
Q psy2386 203 LHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 203 ~~l~~-adgVmigRa~l~~P~i 223 (311)
++++. +|+|.+|++++..|..
T Consensus 189 ~~~~aGaD~vvvGsai~~~~d~ 210 (228)
T 1h1y_A 189 VAASAGANCIVAGSSIFGAAEP 210 (228)
T ss_dssp HHHHHTCCEEEESHHHHTSSCH
T ss_pred HHHHcCCCEEEECHHHHCCCCH
Confidence 88875 9999999999876653
No 166
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.42 E-value=2.3e-06 Score=80.71 Aligned_cols=134 Identities=11% Similarity=0.067 Sum_probs=105.8
Q ss_pred CCeEEEecC---CCHHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEE
Q psy2386 46 HPIAFQVGD---NEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITV 119 (311)
Q Consensus 46 ~p~~~Ql~g---~~~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsv 119 (311)
.|+-..+.| .+|+++.+.|+...+. ||..|-+..|+| +++.-.++++++|+++ ++++.|
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~v 202 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAI 202 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEe
Confidence 455444333 3899999888877777 999999998876 2455577889999987 578999
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
...-+|+. ++..++++.+++.|+.+|- + ..++.|++..+++++.. ++||.+.+.+.|++
T Consensus 203 Dan~~~~~----~~a~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 261 (372)
T 3tj4_A 203 DGNGKWDL----PTCQRFCAAAKDLDIYWFE--------E--------PLWYDDVTSHARLARNT-SIPIALGEQLYTVD 261 (372)
T ss_dssp ECTTCCCH----HHHHHHHHHTTTSCEEEEE--------S--------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHH
T ss_pred eCCCCCCH----HHHHHHHHHHhhcCCCEEE--------C--------CCCchhHHHHHHHHhhc-CCCEEeCCCccCHH
Confidence 88888874 3567899999999888772 1 11235899999999998 79999999999999
Q ss_pred HHHHHHhh--cCEEEEeh
Q psy2386 200 EIDLHLNY--IDGVMLGR 215 (311)
Q Consensus 200 da~~~l~~--adgVmigR 215 (311)
++.++++. +|.|++--
T Consensus 262 ~~~~~i~~~~~d~v~~k~ 279 (372)
T 3tj4_A 262 AFRSFIDAGAVAYVQPDV 279 (372)
T ss_dssp HHHHHHHTTCCSEECCCT
T ss_pred HHHHHHHcCCCCEEEeCc
Confidence 99999975 99999843
No 167
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.42 E-value=3.8e-06 Score=79.18 Aligned_cols=142 Identities=12% Similarity=0.143 Sum_probs=108.7
Q ss_pred CCCeEEEecCCCH-HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 45 EHPIAFQVGDNEP-KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~-~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
..|+-..+...++ +.+.++++.+.+.||..+-+..|+. +++.-.+.++++|+++ ++++.|+.
T Consensus 131 ~v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDa 195 (370)
T 1chr_A 131 AIPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDV 195 (370)
T ss_dssp EEEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEEC
T ss_pred ceeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 3455455554454 5566777777768999999988763 3555677888999987 47999999
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+.. +..++++.+++.|+++|. + ..++.|++..+++++.. ++||.+.+.+.+++|+
T Consensus 196 n~~~~~~----~a~~~~~~l~~~~i~~iE--------q--------P~~~~~~~~~~~l~~~~-~iPia~dE~~~~~~~~ 254 (370)
T 1chr_A 196 NQAWDEQ----VASVYIPELEALGVELIE--------Q--------PVGRENTQALRRLSDNN-RVAIMADESLSTLASA 254 (370)
T ss_dssp TTCCCTT----HHHHHTHHHHTTTEEEEE--------C--------CSCTTCHHHHHHHHHHS-CSEEEESSSCCSHHHH
T ss_pred CCCCCHH----HHHHHHHHHHhcCCCEEE--------C--------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHH
Confidence 9999864 467899999999988873 1 12335889999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCc
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPF 222 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~ 222 (311)
.++++. +|.|++--+-.+...
T Consensus 255 ~~~~~~~~~d~v~~k~~~~GGit 277 (370)
T 1chr_A 255 FDLARDRSVDVFSLKLCNMGGVS 277 (370)
T ss_dssp HHHHTTTSCSEEEECTTTSCSHH
T ss_pred HHHHHcCCCCEEEECccccCCHH
Confidence 999975 999999755554443
No 168
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.40 E-value=1.8e-06 Score=75.95 Aligned_cols=142 Identities=20% Similarity=0.198 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEeccCC-CCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHRIGID-DINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR~g~~-~~~~~~~ 133 (311)
..+.-+.-++.+.+.|+|.||+.+ .+|+.+-.+.+.+.+-+.++++.++ .|+-|=+-.+.- +..+.++
T Consensus 78 ~~~~K~~E~~~Ai~~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~ee 147 (231)
T 3ndo_A 78 VPGIKATEAELAVAAGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPL 147 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHH
Confidence 445445455667788999999752 1455555788888988899988874 444332333322 0012235
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cC--
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-ID-- 209 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-ad-- 209 (311)
....++...++|+|+|.-. .||++ .+.+..+.++-+++.+ ++++|-+.|||+|.+|+.++++. |+
T Consensus 148 i~~a~~ia~~aGADfVKTS------TGf~~-----~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 148 LADVCRVARDAGADFVKTS------TGFHP-----SGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRL 216 (231)
T ss_dssp HHHHHHHHHHTTCSEEECC------CSCCT-----TCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHCcCEEEcC------CCCCC-----CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhc
Confidence 6777888889999999543 33320 0124555565555543 36999999999999999999987 99
Q ss_pred EEEEehhhh
Q psy2386 210 GVMLGREAY 218 (311)
Q Consensus 210 gVmigRa~l 218 (311)
|+..|+.++
T Consensus 217 GtS~g~~I~ 225 (231)
T 3ndo_A 217 GLSGSRAVL 225 (231)
T ss_dssp EESSHHHHH
T ss_pred ccchHHHHH
Confidence 666666554
No 169
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.40 E-value=4.6e-06 Score=79.08 Aligned_cols=151 Identities=14% Similarity=0.150 Sum_probs=119.2
Q ss_pred CCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEE
Q psy2386 43 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 120 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvK 120 (311)
.+..|+-..++..+|+++++.++.+.+.||..|-+..|||.. ..+++.-.+.++++|+++ ++++.|.
T Consensus 132 ~~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vD 200 (386)
T 3fv9_G 132 AGPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLAD 200 (386)
T ss_dssp SSCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CCceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 345678888989999999999998888999999999999732 134677778899999987 5788898
Q ss_pred EeccCCCCCcHHHHHHHHHHH-HHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 121 HRIGIDDINSYDFVRDFVGTV-SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l-~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
..-+|+.. +..++++.+ ++.++ +|- + |..+++..+++++.. ++||.+...+.+.+
T Consensus 201 aN~~~~~~----~A~~~~~~l~~~~~i-~iE---------------e---P~~~~~~~~~l~~~~-~iPIa~dE~~~~~~ 256 (386)
T 3fv9_G 201 ANNGLTVE----HALRMLSLLPPGLDI-VLE---------------A---PCASWAETKSLRARC-ALPLLLDELIQTET 256 (386)
T ss_dssp CTTCCCHH----HHHHHHHHSCSSCCC-EEE---------------C---CCSSHHHHHHHHTTC-CSCEEESTTCCSHH
T ss_pred CCCCCCHH----HHHHHHHHhhccCCc-EEe---------------c---CCCCHHHHHHHHhhC-CCCEEeCCCcCCHH
Confidence 88888742 467888888 66666 551 1 113889999999988 79999999999999
Q ss_pred HHHHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 200 EIDLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 200 da~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
++.++++. +|.|++--+-.+...=..++.
T Consensus 257 ~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~ 287 (386)
T 3fv9_G 257 DLIAAIRDDLCDGVGLKVSKQGGITPMLRQR 287 (386)
T ss_dssp HHHHHHHTTCCSEEEEEHHHHTSHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEECccccCCHHHHHHHH
Confidence 99999975 999999876666655444443
No 170
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.40 E-value=7.1e-07 Score=79.67 Aligned_cols=165 Identities=14% Similarity=0.089 Sum_probs=97.3
Q ss_pred CCCeEEEecCC--CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcc------cCccc--CChHHHHHHHHHHhcccc
Q psy2386 45 EHPIAFQVGDN--EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFF------GAILM--TKPLLVSDCIKAMRDSVE 114 (311)
Q Consensus 45 ~~p~~~Ql~g~--~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~------G~~Ll--~~~~~~~~iv~~v~~~~~ 114 (311)
..-++.=|... +++...+.++.+.+.|+|.|||.+ |...-.-+|- --+|- -+.+.+.++++++|+.
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGi--PfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-- 88 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGV--AYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-- 88 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEEC--CCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--
Confidence 34466666443 568899999999999999999964 3332222210 00111 2457788888888865
Q ss_pred ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEE--------------------------ecCcc---------cc-
Q psy2386 115 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIV--------------------------HARNA---------FL- 158 (311)
Q Consensus 115 ~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itv--------------------------h~Rt~---------~~- 158 (311)
+|+.+=. .|+.-..+ -...|++.+.++|+|.+.+ .+.+. ..
T Consensus 89 ~Pivlm~--Y~N~i~~~-G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~ 165 (252)
T 3tha_A 89 KALVFMV--YYNLIFSY-GLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAK 165 (252)
T ss_dssp SEEEEEC--CHHHHHHH-CHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCC
T ss_pred CCEEEEe--ccCHHHHh-hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCC
Confidence 6765421 11100000 0123455555555555442 12210 01
Q ss_pred --------ccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhh
Q psy2386 159 --------KKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAY 218 (311)
Q Consensus 159 --------~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l 218 (311)
.|.+|.... ....-.++++++++.. ++||+..+||++++++.++.+.||||.||++++
T Consensus 166 gFiY~Vs~~GvTG~~~~-~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~~ADGVIVGSAiV 231 (252)
T 3tha_A 166 GFIYLLASIGITGTKSV-EEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRKVADGVIVGTSIV 231 (252)
T ss_dssp SCEEEECCSCSSSCSHH-HHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTTTSSEEEECHHHH
T ss_pred CeEEEEecCCCCCcccC-CCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHhcCCEEEECHHHH
Confidence 123332110 0001145788898886 899999999999999999887799999999986
No 171
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.39 E-value=7.6e-06 Score=77.57 Aligned_cols=148 Identities=9% Similarity=0.058 Sum_probs=114.2
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
..|+-..+...+++.+.+.++...+.||..|-+..|+. +++.-.+.++++|+++ ++++.|...-
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~ 201 (385)
T 3i6e_A 137 TIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQ 201 (385)
T ss_dssp EEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45666777777899888877776677999999998752 3445566777888776 6789999888
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+.. +..++++.+++.|+.+|- + ..++.|++..+++++.. ++||.+...+.+++|+.+
T Consensus 202 ~~~~~----~A~~~~~~L~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ 260 (385)
T 3i6e_A 202 GLEID----EAVPRVLDVAQFQPDFIE--------Q--------PVRAHHFELMARLRGLT-DVPLLADESVYGPEDMVR 260 (385)
T ss_dssp CCCGG----GHHHHHHHHHTTCCSCEE--------C--------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHH
T ss_pred CCCHH----HHHHHHHHHHhcCCCEEE--------C--------CCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHHHH
Confidence 89854 367899999999999883 1 12345899999999987 799999999999999999
Q ss_pred HHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 204 HLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 204 ~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
+++. +|.|++--+-.+...=..++.
T Consensus 261 ~~~~~~~d~v~~k~~~~GGit~~~~i~ 287 (385)
T 3i6e_A 261 AAHEGICDGVSIKIMKSGGLTRAQTVA 287 (385)
T ss_dssp HHHHTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHcCCCCEEEecccccCCHHHHHHHH
Confidence 9975 999999766665554343443
No 172
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.39 E-value=4.8e-06 Score=78.89 Aligned_cols=139 Identities=11% Similarity=0.060 Sum_probs=110.5
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVK 120 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvK 120 (311)
+..|+-..++..+|+.+++.++...+. ||..+-+..|++ +++.-.+.++++|+++ ++++.|.
T Consensus 155 ~~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vD 219 (383)
T 3toy_A 155 RPIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLD 219 (383)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 345666666667999999999888777 999999998764 3555667888898886 5788898
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 121 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
..-+|+. ++..++++.+++.|+.+|- + ..++.|++..+++++.. ++||.+.+.+.+++|
T Consensus 220 aN~~~~~----~~A~~~~~~l~~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 278 (383)
T 3toy_A 220 FNQSLDP----AEATRRIARLADYDLTWIE--------E--------PVPQENLSGHAAVRERS-EIPIQAGENWWFPRG 278 (383)
T ss_dssp CTTCSCH----HHHHHHHHHHGGGCCSEEE--------C--------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHH
T ss_pred CCCCCCH----HHHHHHHHHHHhhCCCEEE--------C--------CCCcchHHHHHHHHhhc-CCCEEeCCCcCCHHH
Confidence 8888874 3567899999999998883 1 12335899999999998 799999999999999
Q ss_pred HHHHHhh--cCEEEEehhhh
Q psy2386 201 IDLHLNY--IDGVMLGREAY 218 (311)
Q Consensus 201 a~~~l~~--adgVmigRa~l 218 (311)
+.++++. +|.|++--+-.
T Consensus 279 ~~~~i~~~a~d~v~ik~~~~ 298 (383)
T 3toy_A 279 FAEAIAAGASDFIMPDLMKV 298 (383)
T ss_dssp HHHHHHHTCCSEECCCTTTT
T ss_pred HHHHHHcCCCCEEEeCcccc
Confidence 9999975 99998754333
No 173
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.39 E-value=7.8e-07 Score=79.20 Aligned_cols=88 Identities=17% Similarity=0.297 Sum_probs=75.1
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..++++.+.+.|++.+++-.-++...| .+.+++.++++.+.+ .+|+...|||+|.++++++++. ||-|.
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~---------~~~~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVi 102 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDP---------SKRQFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVV 102 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCG---------GGCCHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEEecCccccc---------chhHHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEE
Confidence 578999999999999998644332222 135889999999998 7999999999999999999987 99999
Q ss_pred EehhhhhCCcchHHhHhhh
Q psy2386 213 LGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 213 igRa~l~~P~i~~~~~~~~ 231 (311)
+|+.++.||.++.++.+.+
T Consensus 103 i~t~a~~~p~li~e~~~~~ 121 (243)
T 4gj1_A 103 IGSMAIKDATLCLEILKEF 121 (243)
T ss_dssp ECTTTTTCHHHHHHHHHHH
T ss_pred EccccccCCchHHHHHhcc
Confidence 9999999999998887654
No 174
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.39 E-value=1.2e-06 Score=78.69 Aligned_cols=168 Identities=12% Similarity=0.172 Sum_probs=101.2
Q ss_pred hccccCCCCCCeEEEecCCCHH-HHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--
Q psy2386 37 HCLDFNAEEHPIAFQVGDNEPK-KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-- 113 (311)
Q Consensus 37 ~~l~~~~~~~p~~~Ql~g~~~~-~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-- 113 (311)
++|..-. +.|+..|+.+.||- .+....+.++++||.+| +|. |..-...+.+-..|.+++--..++++.++.+-
T Consensus 87 evlp~v~-~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~ 162 (286)
T 2p10_A 87 EVLPVVR-HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL 162 (286)
T ss_dssp HHGGGCS-SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred hhhccCC-CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC
Confidence 3444433 78999999999985 35555577889999999 996 43323334444455555444444444444332
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc-HHHHHHH----HHhCCCCe
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNL----KKDFPELE 188 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~-~~~i~~i----~~~~~~ip 188 (311)
++- |+=+- + ..+-++.+.++|+|.|.+|.... ..|.-|.... ....+ -+.+.++ ++..|++.
T Consensus 163 gL~-Ti~~v----~------~~eeA~amA~agpDiI~~h~glT-~gglIG~~~a-vs~~~~~e~i~~i~~a~~~vnpdvi 229 (286)
T 2p10_A 163 DLL-TTPYV----F------SPEDAVAMAKAGADILVCHMGLT-TGGAIGARSG-KSMDDCVSLINECIEAARTIRDDII 229 (286)
T ss_dssp TCE-ECCEE----C------SHHHHHHHHHHTCSEEEEECSCC----------C-CCHHHHHHHHHHHHHHHHHHCSCCE
T ss_pred CCe-EEEec----C------CHHHHHHHHHcCCCEEEECCCCC-CCCcccCCCc-ccHHHhHHHHHHHHHHHHHhCCCcE
Confidence 332 22111 1 13557788899999999996521 2333332111 11122 2333333 33346777
Q ss_pred EEEec-CCCCHHHHHHHHhh---cCEEEEehhhhhCC
Q psy2386 189 IIING-GIKTKKEIDLHLNY---IDGVMLGREAYKNP 221 (311)
Q Consensus 189 vi~nG-gI~s~~da~~~l~~---adgVmigRa~l~~P 221 (311)
|+.-| +|.+++|++.+++. +||+..++++.+=|
T Consensus 230 vLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 230 ILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp EEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred EEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 76555 99999999999985 99999999997766
No 175
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.38 E-value=3.1e-06 Score=80.40 Aligned_cols=143 Identities=15% Similarity=0.153 Sum_probs=112.8
Q ss_pred CCCCeEEEecC---CCHHHHHHHHHHHHHc---CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cc
Q psy2386 44 EEHPIAFQVGD---NEPKKLAKSAKIIQKW---GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EI 115 (311)
Q Consensus 44 ~~~p~~~Ql~g---~~~~~~~~aa~~~~~~---g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~ 115 (311)
+..|+-..+++ .+|+.+++.++...+. ||..|-+..|.+ +++.-.+.++++|+++ ++
T Consensus 156 ~~v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~ 220 (390)
T 3ugv_A 156 GSVKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDT 220 (390)
T ss_dssp CEEEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTS
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCC
Confidence 34455566666 7899999999888877 999999998764 3555667888898887 57
Q ss_pred eeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC
Q psy2386 116 DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 195 (311)
Q Consensus 116 pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI 195 (311)
++.|...-+|+. ++..++++.+++.|+.+|- + ..++.|++..+++++.. ++||.+...+
T Consensus 221 ~l~vDaN~~~~~----~~A~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~ 279 (390)
T 3ugv_A 221 ALMVDFNQGLDM----AEAMHRTRQIDDLGLEWIE--------E--------PVVYDNFDGYAQLRHDL-KTPLMIGENF 279 (390)
T ss_dssp EEEEECTTCCCH----HHHHHHHHHHTTSCCSEEE--------C--------CSCTTCHHHHHHHHHHC-SSCEEECTTC
T ss_pred EEEEECCCCCCH----HHHHHHHHHHHhhCCCEEE--------C--------CCCcccHHHHHHHHHhc-CCCEEeCCCc
Confidence 899988888874 3567899999999998883 1 12235899999999998 7999999999
Q ss_pred CCHHHHHHHHhh--cCEEEEehhhhhCCc
Q psy2386 196 KTKKEIDLHLNY--IDGVMLGREAYKNPF 222 (311)
Q Consensus 196 ~s~~da~~~l~~--adgVmigRa~l~~P~ 222 (311)
.+++|+.++++. +|.|++--+-.+...
T Consensus 280 ~~~~~~~~~i~~~a~d~v~ik~~~~GGit 308 (390)
T 3ugv_A 280 YGPREMHQALQAGACDLVMPDFMRIGGVS 308 (390)
T ss_dssp CSHHHHHHHHHTTCCSEECCBHHHHTHHH
T ss_pred CCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 999999999975 999998755554433
No 176
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.36 E-value=5e-06 Score=78.26 Aligned_cols=136 Identities=13% Similarity=0.201 Sum_probs=106.8
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChH-HHHHHHHHHhccc--cceeEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPL-LVSDCIKAMRDSV--EIDITV 119 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~-~~~~iv~~v~~~~--~~pvsv 119 (311)
+..|+...++..+|+.+++.++...+. ||..+-+..|+. +. .-.++++++|+++ ++++.|
T Consensus 127 ~~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~----------------~~~~d~~~v~avR~a~g~~~~l~v 190 (367)
T 3dg3_A 127 DRMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRR----------------PVQLDTAVVRALRERFGDAIELYV 190 (367)
T ss_dssp SEEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCS----------------STHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCC----------------hhhhHHHHHHHHHHHhCCCCEEEE
Confidence 344566777788999999888877776 999999987752 12 3456788888876 578888
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
...-+|+. ++..++++.+++.|+++|. + ..++.|++..+++++.. ++||.+.+.+.+++
T Consensus 191 Dan~~~~~----~~a~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 249 (367)
T 3dg3_A 191 DGNRGWSA----AESLRAMREMADLDLLFAE--------E--------LCPADDVLSRRRLVGQL-DMPFIADESVPTPA 249 (367)
T ss_dssp ECTTCSCH----HHHHHHHHHTTTSCCSCEE--------S--------CSCTTSHHHHHHHHHHC-SSCEEECTTCSSHH
T ss_pred ECCCCCCH----HHHHHHHHHHHHhCCCEEE--------C--------CCCcccHHHHHHHHHhC-CCCEEecCCcCCHH
Confidence 88878874 3567899999999998883 1 11235889999999998 79999999999999
Q ss_pred HHHHHHhh--cCEEEEehh
Q psy2386 200 EIDLHLNY--IDGVMLGRE 216 (311)
Q Consensus 200 da~~~l~~--adgVmigRa 216 (311)
++.++++. +|.|++==.
T Consensus 250 ~~~~~i~~~~~d~v~~k~~ 268 (367)
T 3dg3_A 250 DVTREVLGGSATAISIKTA 268 (367)
T ss_dssp HHHHHHHHTSCSEEEECHH
T ss_pred HHHHHHHcCCCCEEEeehh
Confidence 99999975 999999433
No 177
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.36 E-value=3.9e-06 Score=73.99 Aligned_cols=156 Identities=16% Similarity=0.212 Sum_probs=106.3
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEecc--CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~--gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
++.+|...|...+.+..+.+.+.|+|.|.+-. |.=.+ +...-.++++++++.++.|+.|-+-+ .
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp-------------~~~~g~~~v~~lr~~~~~~~~vhlmv-~ 72 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVP-------------NITIGPLIVDAIRPLTKKTLDVHLMI-V 72 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS-------------CBCBCHHHHHHHGGGCCSEEEEEEES-S
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCc-------------chhhhHHHHHHHHhhcCCcEEEEEEc-c
Confidence 67899999999999999999999999866653 22111 12222377888888877788766554 2
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecC--cc--------c-----------c-------------------------c
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHAR--NA--------F-----------L-------------------------K 159 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~R--t~--------~-----------~-------------------------~ 159 (311)
+. .++++.+.++|+|.+++|.- .. . . .
T Consensus 73 dp-------~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~p 145 (230)
T 1tqj_A 73 EP-------EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNP 145 (230)
T ss_dssp SG-------GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC
T ss_pred CH-------HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEecc
Confidence 21 13456677888888888865 10 0 0 0
Q ss_pred cCCCCcCCCCCcCcHHHHHHHHHhCC----CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhH
Q psy2386 160 KLNPKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 160 G~~g~~~~~~~~~~~~~i~~i~~~~~----~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~ 228 (311)
|+.| + ...+..++.++++++..+ ++||.+-|||+. +.+.++.+. ||++.+|++++..+..-..++
T Consensus 146 g~gg--q-~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~~~~~~ 215 (230)
T 1tqj_A 146 GFGG--Q-SFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNYAEAIA 215 (230)
T ss_dssp ------C-CCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCHHHHHH
T ss_pred ccCC--c-cCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHH
Confidence 1111 1 112345677888877642 699999999997 899998875 999999999998777544443
No 178
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.35 E-value=2.5e-06 Score=80.48 Aligned_cols=129 Identities=11% Similarity=0.092 Sum_probs=99.7
Q ss_pred CCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 46 HPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 46 ~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
.|+...++. .+++++.+.|+.+.+.||+.|.++.| |+...++++++|+++ ++++.+...-
T Consensus 137 ~~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~ 198 (375)
T 1r0m_A 137 VEVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK------------------PGWDVQPVRATREAFPDIRLTVDANS 198 (375)
T ss_dssp EEBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTT
T ss_pred eeeeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC------------------hHHHHHHHHHHHHHcCCCeEEEeCCC
Confidence 344445543 48999999999888899999999853 122335566776665 6788888877
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+.. + .++++.+++.|+.+|- +- .++.||+..+++++.. ++||.+.+.+.+++++.+
T Consensus 199 ~~~~~----~-~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 256 (375)
T 1r0m_A 199 AYTLA----D-AGRLRQLDEYDLTYIE--------QP--------LAWDDLVDHAELARRI-RTPLCLDESVASASDARK 256 (375)
T ss_dssp CCCGG----G-HHHHHTTGGGCCSCEE--------CC--------SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHH
T ss_pred CCCHH----H-HHHHHHHHhCCCcEEE--------CC--------CCcccHHHHHHHHHhC-CCCEEecCccCCHHHHHH
Confidence 78643 5 7889999999999883 11 1245889999999998 799999999999999999
Q ss_pred HHhh--cCEEEEe
Q psy2386 204 HLNY--IDGVMLG 214 (311)
Q Consensus 204 ~l~~--adgVmig 214 (311)
+++. ||.|++=
T Consensus 257 ~i~~~~~d~v~ik 269 (375)
T 1r0m_A 257 ALALGAGGVINLK 269 (375)
T ss_dssp HHHHTSCSEEEEC
T ss_pred HHHhCCCCEEEEC
Confidence 9975 9999994
No 179
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.35 E-value=4.8e-06 Score=73.58 Aligned_cols=139 Identities=15% Similarity=0.177 Sum_probs=93.4
Q ss_pred HHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe------ccCCC-------C
Q psy2386 62 KSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR------IGIDD-------I 128 (311)
Q Consensus 62 ~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR------~g~~~-------~ 128 (311)
++++.+.+.|+|.|+|..+ .--+.+.+.++++++|+ .++|+.+=.- .|.|. .
T Consensus 24 ~~~~~l~~~GaD~IelG~S--------------~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i~~gvDg~iipdLp~ 88 (234)
T 2f6u_A 24 EIIKAVADSGTDAVMISGT--------------QNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNVVYDVDYLFVPTVLN 88 (234)
T ss_dssp HHHHHHHTTTCSEEEECCC--------------TTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCCCCCSSEEEEEEETT
T ss_pred HHHHHHHHcCCCEEEECCC--------------CCCCHHHHHHHHHHhcC-CCCCEEEecCCcchhhcCCCEEEEcccCC
Confidence 3456778899999999862 11347889999999998 7888755211 11110 0
Q ss_pred CcHHHHH-----HHHHHH----HHcC-----CCEEE-----EecCcc-------------------------c-------
Q psy2386 129 NSYDFVR-----DFVGTV----SSAG-----CRTFI-----VHARNA-------------------------F------- 157 (311)
Q Consensus 129 ~~~~~~~-----e~~~~l----~~~G-----~~~it-----vh~Rt~-------------------------~------- 157 (311)
++.+++. +.++.+ ++.| .+.|- +++.+. +
T Consensus 89 ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vy 168 (234)
T 2f6u_A 89 SADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIY 168 (234)
T ss_dssp BSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEE
Confidence 1111222 344222 6677 77665 222210 0
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhCCc
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPF 222 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~P~ 222 (311)
+.+ +|. +.+.++++++++.++++||+..|||+|+++++++++.||+|.+|+++..+|.
T Consensus 169 l~~-~G~------~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~gAd~VIVGSa~v~~~~ 226 (234)
T 2f6u_A 169 IEY-SGT------YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLRYADTIIVGNVIYEKGI 226 (234)
T ss_dssp EEC-TTS------CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHHHSSEEEECHHHHHHCH
T ss_pred EeC-CCC------cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhCCCEEEEChHHHhCHH
Confidence 011 221 3578999999998646999999999999999999888999999999999875
No 180
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.35 E-value=3.3e-06 Score=81.14 Aligned_cols=162 Identities=10% Similarity=0.068 Sum_probs=120.6
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc------------cc--------CChHHHH
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI------------LM--------TKPLLVS 103 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~------------Ll--------~~~~~~~ 103 (311)
+..|+-..+.+.+|+++++.|+...+.||..|-+..|-|.... .+|.. .- ++.+...
T Consensus 137 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 213 (424)
T 3v3w_A 137 ERILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAK---TYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIP 213 (424)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC---CTTCC-----CCSCCBSSCCEEEECHHHHHHHHH
T ss_pred CceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccc---cccccccccccccccccccccccccchhHHHHHH
Confidence 3455555677889999999999888899999999988753110 01110 00 1246677
Q ss_pred HHHHHHhccc--cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHH
Q psy2386 104 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 181 (311)
Q Consensus 104 ~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~ 181 (311)
+++++||+++ ++++.|...-+|+. ++..++++.|++.|+++|-- ..++.|++..++++
T Consensus 214 e~v~avR~avG~d~~l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEq----------------P~~~~d~~~~~~l~ 273 (424)
T 3v3w_A 214 DVFAAVRKEFGPDIHLLHDVHHRLTP----IEAARLGKALEPYHLFWMED----------------AVPAENQESFKLIR 273 (424)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCH----HHHHHHHHHHGGGCCSEEEC----------------CSCCSSTTHHHHHH
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCCH----HHHHHHHHHHHhcCCCEEEC----------------CCChHhHHHHHHHH
Confidence 8899999987 67899988877864 35789999999999998831 11234788899999
Q ss_pred HhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 182 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 182 ~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.+ ++||++.+.+.+++++.++++. ||.|++--+-.+...=..++.+
T Consensus 274 ~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~ 322 (424)
T 3v3w_A 274 QHT-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIAD 322 (424)
T ss_dssp HHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred hhC-CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHH
Confidence 998 7999999999999999999975 9999997666655554444443
No 181
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.35 E-value=2.6e-06 Score=81.80 Aligned_cols=162 Identities=8% Similarity=0.008 Sum_probs=118.9
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc---cc-----------------CChHHHH
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI---LM-----------------TKPLLVS 103 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~---Ll-----------------~~~~~~~ 103 (311)
+..|+-..+.+.+|+++++.|+...+.||..|-+..|.|.... .+|.. .- ++.+...
T Consensus 138 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 214 (425)
T 3vcn_A 138 TGVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLAS---TYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVP 214 (425)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC---CTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccccc---cccccccccccCcccccccccccccchhHHHHHH
Confidence 3455555677889999999999888899999999988753110 01100 00 0023456
Q ss_pred HHHHHHhccc--cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHH
Q psy2386 104 DCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLK 181 (311)
Q Consensus 104 ~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~ 181 (311)
+++++||+++ ++++.|...-+|+. ++..++++.|++.|+++|-- ..++.|++..++++
T Consensus 215 e~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEq----------------P~~~~d~~~~~~l~ 274 (425)
T 3vcn_A 215 KLFERAREVLGWDVHLLHDVHHRLTP----IEAARLGKDLEPYRLFWLED----------------SVPAENQAGFRLIR 274 (425)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCH----HHHHHHHHHHGGGCCSEEEC----------------CSCCSSTTHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCCH----HHHHHHHHHHHhcCCCEEEC----------------CCChhhHHHHHHHH
Confidence 7888898887 67888888777764 35789999999999998831 11234788899999
Q ss_pred HhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 182 KDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 182 ~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.+ ++||++.+.+.+++++.++++. ||.|++--+-.+...=..++.+
T Consensus 275 ~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 323 (425)
T 3vcn_A 275 QHT-TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAA 323 (425)
T ss_dssp HHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred hcC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHH
Confidence 998 7999999999999999999975 9999997666655554444443
No 182
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.34 E-value=9.5e-06 Score=70.41 Aligned_cols=150 Identities=16% Similarity=0.198 Sum_probs=94.4
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEecc--CC-CccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GC-PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~--gC-P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+...|...|+..+.++++.+.+.|+|.+.+-. |. |. .+-..+ ++++++++.++.|+.+-+-+
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~----------~~~~g~----~~i~~i~~~~~~~~~v~l~v- 70 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVP----------NISFGA----DVVASMRKHSKLVFDCHLMV- 70 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS----------CBCBCH----HHHHHHHTTCCSEEEEEEES-
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC----------ccccCH----HHHHHHHHhCCCCEEEEEee-
Confidence 66778889999999999999999999866653 33 11 011113 44556666666666554332
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc--------ccc------------------------------------c
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------FLK------------------------------------K 160 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~--------~~~------------------------------------G 160 (311)
.+. .++++.+.++|+|.+++|+-.. ... |
T Consensus 71 -~d~------~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g 143 (220)
T 2fli_A 71 -VDP------ERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPG 143 (220)
T ss_dssp -SSG------GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTT
T ss_pred -cCH------HHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCC
Confidence 221 1234677888999998874210 000 1
Q ss_pred CCCCcCCCCCcCcHHHHHHHHHhCC----CCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcc
Q psy2386 161 LNPKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 161 ~~g~~~~~~~~~~~~~i~~i~~~~~----~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i 223 (311)
+.|. ...+..++.++++++..+ ++|+++.|||+ ++++.++++. +|+|.+||+++..+..
T Consensus 144 ~~g~---~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~ 207 (220)
T 2fli_A 144 FGGQ---AFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDL 207 (220)
T ss_dssp CSSC---CCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred Cccc---ccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCH
Confidence 1110 011112244566655431 58999999999 7999888875 9999999999876654
No 183
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.34 E-value=5.8e-06 Score=72.88 Aligned_cols=143 Identities=13% Similarity=0.139 Sum_probs=97.0
Q ss_pred HHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe------ccCC--------CCCcH
Q psy2386 66 IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR------IGID--------DINSY 131 (311)
Q Consensus 66 ~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR------~g~~--------~~~~~ 131 (311)
.+.+.|.|.|+|.. ..--..+.+.++++++|+ .++|+.+=.. .|.| +.+..
T Consensus 31 ~~~~~GtDaI~vGg--------------s~gvt~~~~~~~v~~ik~-~~~Piil~p~~~~~~~~gaD~il~pslln~~~~ 95 (235)
T 3w01_A 31 AICMSQTDAIMIGG--------------TDDVTEDNVIHLMSKIRR-YPLPLVLEISNIESVMPGFDFYFVPTVLNSTDV 95 (235)
T ss_dssp HHHTSSCSEEEECC--------------SSCCCHHHHHHHHHHHTT-SCSCEEEECCCSTTCCTTCSEEEEEEETTBSSG
T ss_pred HHHHcCCCEEEECC--------------cCCcCHHHHHHHHHHhcC-cCCCEEEecCCHHHhhcCCCEEEEccccCCCCc
Confidence 35688999999962 222367889999999999 8999866322 1111 00111
Q ss_pred HHH-HHHHHHHHHcCC-----CEEE-----EecCcc-------------------------------ccccCCCCcCCCC
Q psy2386 132 DFV-RDFVGTVSSAGC-----RTFI-----VHARNA-------------------------------FLKKLNPKQNRKI 169 (311)
Q Consensus 132 ~~~-~e~~~~l~~~G~-----~~it-----vh~Rt~-------------------------------~~~G~~g~~~~~~ 169 (311)
+.+ -.-.+.+.+.|. +.|. +.+.+. .|--++|.
T Consensus 96 ~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~----- 170 (235)
T 3w01_A 96 AFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGI----- 170 (235)
T ss_dssp GGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTS-----
T ss_pred chhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCC-----
Confidence 010 112345777887 5554 332211 00011332
Q ss_pred CcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcCEEEEehhhhhCCcchHHhHh
Q psy2386 170 PILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 170 ~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~adgVmigRa~l~~P~i~~~~~~ 229 (311)
+.+.++++++++.++++||+..|||+|+++++++.+.||+|.+|+++..||..+.++.+
T Consensus 171 -~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~gAD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 171 -YGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp -CCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHTTSSEEEECTHHHHCHHHHHHTTC
T ss_pred -cCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHcCCCEEEECCceecCHHHHHHHHH
Confidence 23789999999976579999999999999999988789999999999999998887654
No 184
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.34 E-value=4.7e-06 Score=72.64 Aligned_cols=77 Identities=9% Similarity=0.088 Sum_probs=58.7
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 216 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa 216 (311)
+..+.+.|+|+|.+.+-... +...| .++.+|+.++++++.. ++||++.||| |++++.++++. +|+|++|++
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~-~~~~g-----~~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFET-DCKKG-----LEGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEEESHH
T ss_pred HHHHHhCCCCEEEECCcccc-CCCCC-----CCCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHH
Confidence 56677899999998654210 00000 0246899999999887 8999999999 99999999987 999999999
Q ss_pred hhhCCc
Q psy2386 217 AYKNPF 222 (311)
Q Consensus 217 ~l~~P~ 222 (311)
++..+.
T Consensus 195 i~~~~d 200 (221)
T 1yad_A 195 IFSSAE 200 (221)
T ss_dssp HHTSSS
T ss_pred hhCCCC
Confidence 987655
No 185
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.31 E-value=4.8e-06 Score=73.60 Aligned_cols=138 Identities=16% Similarity=0.085 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE--eccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH--RIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi--R~g~~~~~~~~~ 133 (311)
..+.-+.-++.+.+.|+|.||+.+ ..|...-.+.+.+.+=+.++++.++- ..+|+ -.+.-. .++
T Consensus 93 ~~~~Kv~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt---~ee 158 (239)
T 3ngj_A 93 PSEVKAYETKVAVEQGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLT---NEE 158 (239)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSC---HHH
T ss_pred chHHHHHHHHHHHHcCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCC---HHH
Confidence 445445555667778999999852 14444446778888888888887742 23454 333321 235
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cC--
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-ID-- 209 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-ad-- 209 (311)
....++...++|+|+|-.. .||++ +.+..+.++-+++.+ ++++|.++|||+|.+|+.++++. |+
T Consensus 159 i~~a~~ia~~aGADfVKTS------TGf~~------ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~ri 226 (239)
T 3ngj_A 159 KVEVCKRCVAAGAEYVKTS------TGFGT------HGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRI 226 (239)
T ss_dssp HHHHHHHHHHHTCSEEECC------CSSSS------CCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHCcCEEECC------CCCCC------CCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccce
Confidence 6777888899999999654 23321 124555555555543 25999999999999999999986 88
Q ss_pred EEEEehhhhh
Q psy2386 210 GVMLGREAYK 219 (311)
Q Consensus 210 gVmigRa~l~ 219 (311)
|+..|+.++.
T Consensus 227 GtS~~~~I~~ 236 (239)
T 3ngj_A 227 GASAGIAILN 236 (239)
T ss_dssp EESCHHHHHH
T ss_pred ecccHHHHHh
Confidence 5555555443
No 186
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.30 E-value=4.1e-06 Score=78.78 Aligned_cols=136 Identities=10% Similarity=0.063 Sum_probs=102.4
Q ss_pred CCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 46 HPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 46 ~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
.|+...++. .+++++.+.|+.+.+.||+.|.++.| |+...+.++++|+++ ++++.+...-
T Consensus 130 ~~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~ 191 (369)
T 2zc8_A 130 VEVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK------------------PGWDYEVLKAVREAFPEATLTADANS 191 (369)
T ss_dssp EEBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTT
T ss_pred eeceEEecCCCCHHHHHHHHHHHHHhhhheeeeecC------------------hhHHHHHHHHHHHHcCCCeEEEecCC
Confidence 344445543 48999999999888899999999853 122335566676665 6778888877
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+.. + .++++.+++.|+.+|. +- .++.||+..+++++.. ++||.+.+.+.+++++.+
T Consensus 192 ~~~~~----~-~~~~~~l~~~~i~~iE--------qP--------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 249 (369)
T 2zc8_A 192 AYSLA----N-LAQLKRLDELRLDYIE--------QP--------LAYDDLLDHAKLQREL-STPICLDESLTGAEKARK 249 (369)
T ss_dssp CCCGG----G-HHHHHGGGGGCCSCEE--------CC--------SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHH
T ss_pred CCCHH----H-HHHHHHHHhCCCcEEE--------CC--------CCcccHHHHHHHHhhC-CCCEEEcCccCCHHHHHH
Confidence 78643 5 6889999999999884 11 1235889999999988 799999999999999999
Q ss_pred HHhh--cCEEEEehhhhhCC
Q psy2386 204 HLNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 204 ~l~~--adgVmigRa~l~~P 221 (311)
+++. +|.|++==.-.+..
T Consensus 250 ~i~~~~~d~v~ik~~~~GGi 269 (369)
T 2zc8_A 250 AIELGAGRVFNVKPARLGGH 269 (369)
T ss_dssp HHHHTCCSEEEECHHHHTSH
T ss_pred HHHhCCCCEEEEchhhhCCH
Confidence 9975 99999954444443
No 187
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.29 E-value=4.2e-05 Score=68.73 Aligned_cols=132 Identities=11% Similarity=0.132 Sum_probs=88.0
Q ss_pred HHHHHHHcCCCEEEecc--CCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEEEEec-cCCCC--CcHHHH
Q psy2386 63 SAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRI-GIDDI--NSYDFV 134 (311)
Q Consensus 63 aa~~~~~~g~d~IdiN~--gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsvKiR~-g~~~~--~~~~~~ 134 (311)
.++.+.+.|+|.|++.. |. .+.+.+.+-++++++.+ ++||.+=..+ |.+.. .+.+..
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~---------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i 161 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGS---------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIV 161 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTS---------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHH
T ss_pred HHHHHHHCCCCEEEEEEecCC---------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHH
Confidence 34556678999999853 51 12233344444444332 7888765433 11110 022345
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCC--CHHHHHHHHh----h-
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK--TKKEIDLHLN----Y- 207 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~--s~~da~~~l~----~- 207 (311)
...++...+.|+|+|.+. +. .+.+.++++++.++.+||++.|||+ |.+++.+++. .
T Consensus 162 ~~a~~~a~~~GAD~vkt~--~~---------------~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aG 224 (263)
T 1w8s_A 162 AYAARIALELGADAMKIK--YT---------------GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAG 224 (263)
T ss_dssp HHHHHHHHHHTCSEEEEE--CC---------------SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEc--CC---------------CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 555788899999999765 21 2567788888887434999999999 9999998883 3
Q ss_pred cCEEEEehhhhhCCcchHH
Q psy2386 208 IDGVMLGREAYKNPFLMSN 226 (311)
Q Consensus 208 adgVmigRa~l~~P~i~~~ 226 (311)
|+|+.+||+++..|.....
T Consensus 225 A~GvsvgraI~~~~dp~~~ 243 (263)
T 1w8s_A 225 ALGIAVGRNVWQRRDALKF 243 (263)
T ss_dssp CCEEEESHHHHTSTTHHHH
T ss_pred CeEEEEehhhcCCcCHHHH
Confidence 9999999999988875443
No 188
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.28 E-value=3.2e-05 Score=74.52 Aligned_cols=147 Identities=13% Similarity=0.156 Sum_probs=115.0
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+.|+.-+=|.-++-+..+ +..+|+|.|=|++.+ .+.+.+.++++..++ .+..+.|-+..
T Consensus 108 ~lPvLrKDFI~d~~Qi~e----a~~~GAD~ILLi~a~---------------l~~~~l~~l~~~a~~-lgm~~LvEvh~- 166 (452)
T 1pii_A 108 PQPILCKDFIIDPYQIYL----ARYYQADACLLMLSV---------------LDDDQYRQLAAVAHS-LEMGVLTEVSN- 166 (452)
T ss_dssp CSCEEEESCCCSHHHHHH----HHHTTCSEEEEETTT---------------CCHHHHHHHHHHHHH-TTCEEEEEECS-
T ss_pred CCCeEEEeccCCHHHHHH----HHHcCCCEEEEEccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeCC-
Confidence 578888888888876554 447899999999654 124677888888777 58888886653
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~ 203 (311)
.+=+.++.+.|++.|-+..|. +..+ ..|++...++.+.+| ++++|+-|||.|++|+.+
T Consensus 167 ----------~eE~~~A~~lga~iIGinnr~--L~t~---------~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~ 225 (452)
T 1pii_A 167 ----------EEEQERAIALGAKVVGINNRD--LRDL---------SIDLNRTRELAPKLGHNVTVISESGINTYAQVRE 225 (452)
T ss_dssp ----------HHHHHHHHHTTCSEEEEESEE--TTTT---------EECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHH
T ss_pred ----------HHHHHHHHHCCCCEEEEeCCC--CCCC---------CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHH
Confidence 233566788999999999886 3332 258888888888765 589999999999999999
Q ss_pred HHhhcCEEEEehhhhhCCcchHHhHhhhcc
Q psy2386 204 HLNYIDGVMLGREAYKNPFLMSNFDLNYYS 233 (311)
Q Consensus 204 ~l~~adgVmigRa~l~~P~i~~~~~~~~~~ 233 (311)
+.+.+|+|.||.+++..+.+-..+.+.+.+
T Consensus 226 ~~~~a~avLVGealmr~~d~~~~~~~l~~~ 255 (452)
T 1pii_A 226 LSHFANGFLIGSALMAHDDLHAAVRRVLLG 255 (452)
T ss_dssp HTTTCSEEEECHHHHTCSCHHHHHHHHHHC
T ss_pred HHHhCCEEEEcHHHcCCcCHHHHHHHHHHH
Confidence 986699999999999999988877765543
No 189
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.28 E-value=4.3e-06 Score=79.42 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=78.7
Q ss_pred ChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 98 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
+++.+.++++.+++. +.|+.++++.. . ..++++.+.++|++.+.+|++.. .+++.+ +..+|+.+
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~----~----~~e~a~~~~~agad~i~i~~~~~-~~~~~~------~~~~~~~i 203 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ----N----VREIAPIVIKAGADLLVIQGTLI-SAEHVN------TGGEALNL 203 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT----T----HHHHHHHHHHTTCSEEEEECSSC-CSSCCC------C-----CH
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc----c----HHHHHHHHHHCCCCEEEEeCCcc-ccccCC------CcccHHHH
Confidence 889999999999886 89999988741 1 35778888899999999997652 222221 11378788
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhh
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREA 217 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~ 217 (311)
.++++.. ++||++ |||.|+++++.+++. ||+|++|+|.
T Consensus 204 ~~l~~~~-~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 204 KEFIGSL-DVPVIA-GGVNDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHC-SSCEEE-ECCCSHHHHHHHHTTTCSEEEESCCS
T ss_pred HHHHHhc-CCCEEE-CCcCCHHHHHHHHHcCCCEEEECCCc
Confidence 9999988 899999 999999999999987 9999998854
No 190
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.27 E-value=3.9e-05 Score=65.88 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=90.9
Q ss_pred CCCeEEEecCCC-HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 45 EHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~-~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
+.|+++-+.-.| |+.++ +.+.++|+|+|-+|.+.. .+.+.++++.+++. +.++.+-+-
T Consensus 53 ~~~i~~~l~~~di~~~~~---~~a~~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~- 111 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEA---DIAFKAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI- 111 (207)
T ss_dssp TSEEEEEEEECSCHHHHH---HHHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-
T ss_pred CCeEEEEEEecCccHHHH---HHHHhCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe-
Confidence 578888777778 88765 456678999999985432 23345556665553 555433221
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEe-cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVH-ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh-~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
..+ + ..+.++.+.+.|+|++.++ +.+....| . .+.. +.+++++.. ++|+++.|||+ ++++.
T Consensus 112 s~~--~----p~~~~~~~~~~g~d~v~~~~~~~~~~~g---~-----~~~~-~~i~~~~~~--~~pi~v~GGI~-~~~~~ 173 (207)
T 3ajx_A 112 GIE--D----KATRAQEVRALGAKFVEMHAGLDEQAKP---G-----FDLN-GLLAAGEKA--RVPFSVAGGVK-VATIP 173 (207)
T ss_dssp TCS--S----HHHHHHHHHHTTCSEEEEECCHHHHTST---T-----CCTH-HHHHHHHHH--TSCEEEESSCC-GGGHH
T ss_pred cCC--C----hHHHHHHHHHhCCCEEEEEecccccccC---C-----CchH-HHHHHhhCC--CCCEEEECCcC-HHHHH
Confidence 111 1 1234566677899999554 44421122 1 1223 556666553 58999999998 78888
Q ss_pred HHHhh-cCEEEEehhhhhCCcch
Q psy2386 203 LHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 203 ~~l~~-adgVmigRa~l~~P~i~ 224 (311)
++++. ||+|.+||+++..+...
T Consensus 174 ~~~~aGad~vvvGsaI~~~~dp~ 196 (207)
T 3ajx_A 174 AVQKAGAEVAVAGGAIYGAADPA 196 (207)
T ss_dssp HHHHTTCSEEEESHHHHTSSSHH
T ss_pred HHHHcCCCEEEEeeeccCCCCHH
Confidence 88876 99999999998866543
No 191
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.27 E-value=1.6e-05 Score=75.11 Aligned_cols=148 Identities=6% Similarity=0.079 Sum_probs=115.7
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
+..|+-..++..+|+.+++.|+...+.||..|-+..|. +++.-.+.++++|+++ ++++.|..
T Consensus 130 ~~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDa 193 (379)
T 3r0u_A 130 NSIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDA 193 (379)
T ss_dssp CEEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEEC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeC
Confidence 34466677888899999999988888899999998763 3566678889999987 47899988
Q ss_pred eccCCCCCcHHHHHHHHHHHHH--cCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSS--AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~--~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
.-+|+. ++..++++.+++ .|+.+|- + ..++.|++..+++++.. .+||.++..+.|+.
T Consensus 194 N~~w~~----~~A~~~~~~l~~~~~~l~~iE--------e--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 252 (379)
T 3r0u_A 194 NQGWNL----AQTKQFIEEINKYSLNVEIIE--------Q--------PVKYYDIKAMAEITKFS-NIPVVADESVFDAK 252 (379)
T ss_dssp TTCCCH----HHHHHHHHHHHTSCCCEEEEE--------C--------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHH
T ss_pred CCCcCH----HHHHHHHHHHhhcCCCcEEEE--------C--------CCCcccHHHHHHHHhcC-CCCEEeCCccCCHH
Confidence 888874 356899999999 6666662 1 12235899999999998 79999999999999
Q ss_pred HHHHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 200 EIDLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 200 da~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
|+.++++. +|.|++--+-.+...=..++.
T Consensus 253 ~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia 283 (379)
T 3r0u_A 253 DAERVIDEQACNMINIKLAKTGGILEAQKIK 283 (379)
T ss_dssp HHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECccccCCHHHHHHHH
Confidence 99999975 999999766655554344443
No 192
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.25 E-value=1.4e-05 Score=71.12 Aligned_cols=152 Identities=15% Similarity=0.229 Sum_probs=106.6
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCC--EEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYD--EINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d--~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
.+..+|...|...+.+..+.+++.|+| .+|+=-|.=+||.+ +| -.+++++|+.+ ++|+.|.+-+
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit---~G----------~~~v~~lr~~~p~~~ldvHLmv 95 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLT---FG----------PMVLKALRDYGITAGMDVHLMV 95 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC---CC----------HHHHHHHHHHTCCSCEEEEEEC
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchh---cC----------HHHHHHHHHhCCCCeEEEEEee
Confidence 488999999999999999999999998 55554443333321 22 25677888877 8999998875
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc--------------------------------c------------cc
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------------------------------F------------LK 159 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~--------------------------------~------------~~ 159 (311)
. + ...+++.+.++|+|.||+|.-.. . ..
T Consensus 96 ~--~------p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~P 167 (246)
T 3inp_A 96 K--P------VDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNP 167 (246)
T ss_dssp S--S------CHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCT
T ss_pred C--C------HHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecC
Confidence 2 1 13567888899999999984210 0 01
Q ss_pred cCCCCcCCCCCcCcHHHHHHHHHhC----CCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcc
Q psy2386 160 KLNPKQNRKIPILKYNFVYNLKKDF----PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 160 G~~g~~~~~~~~~~~~~i~~i~~~~----~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i 223 (311)
|+.|. ... +..++.|+++++.. .+++|..-|||+ ++.+.++.+. ||.+.+||++++.+..
T Consensus 168 GfgGQ--~fi-~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp 232 (246)
T 3inp_A 168 GFGGQ--KFI-PAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSY 232 (246)
T ss_dssp TC--C--CCC-TTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCH
T ss_pred CCCCc--ccc-hHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCH
Confidence 22221 111 33467777777642 258999999999 6889888876 9999999998876543
No 193
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.25 E-value=2e-05 Score=68.95 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe--ccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR--IGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR--~g~~~~~~~~~ 133 (311)
+.+.-..-++.+.+.|+|.||+.+ ..|...-.+.+.+.+=+.++++.++-+ .+|+= .+.-. .++
T Consensus 69 ~~~~k~~e~~~Ai~~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~---~e~ 134 (220)
T 1ub3_A 69 EKEVKALEAALACARGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFS---PEE 134 (220)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSC---HHH
T ss_pred chHHHHHHHHHHHHcCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCC---HHH
Confidence 344455556677788999999853 134444457788888888888877533 45632 23222 235
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cC--
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-ID-- 209 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-ad-- 209 (311)
....++...++|+|+|-.. .||++ +.+..+.++.+++.+ +++||.+.|||+|.+|+.++++. |+
T Consensus 135 i~~a~~ia~eaGADfVKTs------TGf~~------~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~Ri 202 (220)
T 1ub3_A 135 IARLAEAAIRGGADFLKTS------TGFGP------RGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRL 202 (220)
T ss_dssp HHHHHHHHHHHTCSEEECC------CSSSS------CCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCEEEeC------CCCCC------CCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCccc
Confidence 6778888899999999543 23321 124555555555422 26999999999999999999986 99
Q ss_pred EEEEehhhhh
Q psy2386 210 GVMLGREAYK 219 (311)
Q Consensus 210 gVmigRa~l~ 219 (311)
|+..|+.++.
T Consensus 203 G~S~g~~I~~ 212 (220)
T 1ub3_A 203 GTSSGVALVA 212 (220)
T ss_dssp EETTHHHHHC
T ss_pred chhHHHHHHH
Confidence 7776766543
No 194
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=98.24 E-value=9e-06 Score=77.67 Aligned_cols=140 Identities=9% Similarity=0.032 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCcccc---ccCcccC----cccC---ChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRV---QNGFFGA----ILMT---KPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v---~~~~~G~----~Ll~---~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
.+|+++++.|+.+.+.||..|-+..+.+.... .+.|.|. ..-. ..+...+++++||+++ ++++.|...
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 47999999999888899999999874322110 0001111 1101 1356678899999987 678999888
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+. ++..++++.|++.|+++|.. |+.|++..+++++.+ ++||++.+.+.+++++.
T Consensus 222 ~~~~~----~~A~~~~~~L~~~~i~~iE~------------------P~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 278 (409)
T 3go2_A 222 FNAKP----EGYLKILRELADFDLFWVEI------------------DSYSPQGLAYVRNHS-PHPISSCETLFGIREFK 278 (409)
T ss_dssp TCSCH----HHHHHHHHHTTTSCCSEEEC------------------CCSCHHHHHHHHHTC-SSCEEECTTCCHHHHHH
T ss_pred CCCCH----HHHHHHHHHHhhcCCeEEEe------------------CcCCHHHHHHHHhhC-CCCEEeCCCcCCHHHHH
Confidence 78864 35688999999999999852 124888999999998 79999999999999999
Q ss_pred HHHhh--cCEEEEehhh
Q psy2386 203 LHLNY--IDGVMLGREA 217 (311)
Q Consensus 203 ~~l~~--adgVmigRa~ 217 (311)
++++. ||.|++=-.-
T Consensus 279 ~~i~~~~~d~v~~k~~~ 295 (409)
T 3go2_A 279 PFFDANAVDVAIVDTIW 295 (409)
T ss_dssp HHHHTTCCSEEEECHHH
T ss_pred HHHHhCCCCEEEeCCCC
Confidence 99975 9999986444
No 195
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.24 E-value=1.1e-05 Score=76.59 Aligned_cols=145 Identities=10% Similarity=0.114 Sum_probs=113.6
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEEEE
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsvKi 121 (311)
..|+-..+...+|+.+++.++...+.||..|-+..|++ +++.-.+.++++|+++ ++++.|..
T Consensus 153 ~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDa 217 (391)
T 4e8g_A 153 RVPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDG 217 (391)
T ss_dssp EEECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEEC
T ss_pred cEEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeC
Confidence 34566778888999999999888888999999998874 3455567778887765 46788888
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+.. +..++++.+++.++ +|- + |..|++..+++++.. .+||.+...+.+..|+
T Consensus 218 N~~w~~~----~A~~~~~~L~~~~i-~iE---------------e---P~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 273 (391)
T 4e8g_A 218 NRSLPSR----DALRLSRECPEIPF-VLE---------------Q---PCNTLEEIAAIRGRV-QHGIYLDESGEDLSTV 273 (391)
T ss_dssp TTCCCHH----HHHHHHHHCTTSCE-EEE---------------S---CSSSHHHHHHHGGGC-CSCEEESTTCCSHHHH
T ss_pred CCCCCHH----HHHHHHHHHhhcCe-EEe---------------c---CCccHHHHHHHHhhC-CCCEEeCCCCCCHHHH
Confidence 8888742 56788999998887 661 1 124899999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
.++++. +|.|++--+-.+...=..++.
T Consensus 274 ~~~~~~~a~d~v~ik~~~~GGit~~~~ia 302 (391)
T 4e8g_A 274 IRAAGQGLCDGFGMKLTRIGGLQQMAAFR 302 (391)
T ss_dssp HHHHHTTCCSEEEEEHHHHTSHHHHHHHH
T ss_pred HHHHHcCCCCEEEeCccccCCHHHHHHHH
Confidence 999975 999999876666554444443
No 196
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.23 E-value=2.9e-05 Score=66.82 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=59.4
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGRE 216 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa 216 (311)
+..+.+.|+|+|.+++......+ .. ..+.+|+.++++++.. ++||++.|||+ ++++.++++. +|+|++|++
T Consensus 121 ~~~~~~~g~d~i~~~~~~~~~~~----~~--~~~~~~~~l~~l~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 121 ALEAEKKGADYLGAGSVFPTKTK----ED--ARVIGLEGLRKIVESV-KIPVVAIGGIN-KDNAREVLKTGVDGIAVISA 192 (215)
T ss_dssp HHHHHHHTCSEEEEECSSCC--------C--CCCCHHHHHHHHHHHC-SSCEEEESSCC-TTTHHHHHTTTCSEEEESHH
T ss_pred HHHHHhcCCCEEEEcCCccCCCC----CC--CCCcCHHHHHHHHHhC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHH
Confidence 34567889999998763210000 00 1246899999999887 89999999999 9999998876 999999999
Q ss_pred hhhCCcc
Q psy2386 217 AYKNPFL 223 (311)
Q Consensus 217 ~l~~P~i 223 (311)
++..|..
T Consensus 193 i~~~~d~ 199 (215)
T 1xi3_A 193 VMGAEDV 199 (215)
T ss_dssp HHTSSSH
T ss_pred HhCCCCH
Confidence 9877653
No 197
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.22 E-value=2.1e-05 Score=77.16 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=85.0
Q ss_pred HHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-c-ceeEEEEeccCCCCCcHHHHHHHHH
Q psy2386 62 KSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-E-IDITVKHRIGIDDINSYDFVRDFVG 139 (311)
Q Consensus 62 ~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~-~pvsvKiR~g~~~~~~~~~~~e~~~ 139 (311)
+.++.+.+.|++.+-+.... | ++..+.+.++.+++.. + +||.++--.. .+-++
T Consensus 245 e~~~~l~e~gv~~l~Vd~~~----------g-----~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t----------~~~a~ 299 (503)
T 1me8_A 245 ERVPALVEAGADVLCIDSSD----------G-----FSEWQKITIGWIREKYGDKVKVGAGNIVD----------GEGFR 299 (503)
T ss_dssp HHHHHHHHHTCSEEEECCSC----------C-----CSHHHHHHHHHHHHHHGGGSCEEEEEECS----------HHHHH
T ss_pred HHHHHHHhhhccceEEeccc----------C-----cccchhhHHHHHHHhCCCCceEeeccccC----------HHHHH
Confidence 33566666789988775321 1 1233555567777765 5 7888765431 46678
Q ss_pred HHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC--------CCeEEEecCCCCHHHHHHHHhh-cCE
Q psy2386 140 TVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP--------ELEIIINGGIKTKKEIDLHLNY-IDG 210 (311)
Q Consensus 140 ~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~--------~ipvi~nGgI~s~~da~~~l~~-adg 210 (311)
.+.++|++.+.+ |........ .......+......+.++.+.+. ++|||+.|||+++.|+.++++. ||+
T Consensus 300 ~l~~aGad~I~V-g~~~g~~~~-~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~ 377 (503)
T 1me8_A 300 YLADAGADFIKI-GIGGGSICI-TREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADF 377 (503)
T ss_dssp HHHHHTCSEEEE-CSSCSTTCC-STTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHhCCCeEEe-cccCCcCcc-cccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCE
Confidence 899999999988 442100000 00000112235566666654432 4999999999999999999987 999
Q ss_pred EEEehhhhh
Q psy2386 211 VMLGREAYK 219 (311)
Q Consensus 211 VmigRa~l~ 219 (311)
||+||.++.
T Consensus 378 V~iG~~~~~ 386 (503)
T 1me8_A 378 IMLGRYFAR 386 (503)
T ss_dssp EEESHHHHT
T ss_pred EEECchhhc
Confidence 999999864
No 198
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.21 E-value=4.5e-06 Score=89.70 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=79.5
Q ss_pred ChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCc-CCCCCcCcHH
Q psy2386 98 KPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ-NRKIPILKYN 175 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~-~~~~~~~~~~ 175 (311)
+++.+.++++.+++.. ++||.||+-.... ..+.++.+.++|+|+|+|.|..... +-++.. ....+..-..
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g-------i~~~A~~a~~AGAD~IvVsG~eGGT-gasp~~~~~~~G~Pt~~ 1047 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRSG-------IGTIAAGVAKANADIILISGNSGGT-GASPQTSIKFAGLPWEM 1047 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCTT-------HHHHHHHHHHTTCSEEEEECTTCCC-SSEETTHHHHSCCCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCCC-------hHHHHHHHHHcCCcEEEEcCCCCCC-CCCchhhhcCCchhHHH
Confidence 3567889999999987 8999999876421 2456888999999999997553200 000000 0001111224
Q ss_pred HHHHHHHhC------CCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhh
Q psy2386 176 FVYNLKKDF------PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 176 ~i~~i~~~~------~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~ 219 (311)
.+.++.+.+ .++|||+.|||.|..|+.+++.. ||+|++||+++.
T Consensus 1048 aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1048 GLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHH
Confidence 455555532 26999999999999999999987 999999999965
No 199
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.21 E-value=1.3e-05 Score=77.36 Aligned_cols=165 Identities=9% Similarity=0.066 Sum_probs=121.2
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc-----------cccCc------------ccCcc--cCC
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----------VQNGF------------FGAIL--MTK 98 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~-----------v~~~~------------~G~~L--l~~ 98 (311)
+..|+-..+.+.+|+++++.++...+.||..+-+..|-.... +..+. -|..+ .++
T Consensus 143 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (440)
T 3t6c_A 143 DGIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAY 222 (440)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHH
T ss_pred CeeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhh
Confidence 345555567889999999999988888999999988743210 00000 00000 011
Q ss_pred hHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHH
Q psy2386 99 PLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF 176 (311)
Q Consensus 99 ~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~ 176 (311)
.+...+++++||+++ ++++.|...-+|+.. +..++++.|++.|+.+|- + ..++.|++.
T Consensus 223 ~~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~----~A~~~~~~L~~~~i~~iE--------e--------P~~~~d~~~ 282 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVELLHDAHERITPI----NAIHMAKALEPYQLFFLE--------D--------PVAPENTEW 282 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCSCHH----HHHHHHHHTGGGCCSEEE--------C--------SSCGGGGGG
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEECCCCCCHH----HHHHHHHHhhhcCCCEEE--------C--------CCChhhHHH
Confidence 456678899999987 678999988888743 568999999999999883 1 112347888
Q ss_pred HHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 177 VYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 177 i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
.+++++.. ++||.+.+.+.+++++.++++. ||.|++--+-.+...=..++.+
T Consensus 283 ~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 336 (440)
T 3t6c_A 283 LKMLRQQS-STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAI 336 (440)
T ss_dssp HHHHHHHC-CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred HHHHHhhc-CCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHH
Confidence 89999988 7999999999999999999975 9999998777776665555544
No 200
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.20 E-value=1.6e-05 Score=69.20 Aligned_cols=78 Identities=12% Similarity=0.084 Sum_probs=57.5
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC-CeEEEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~-ipvi~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
+..+.+.|+|+|.+..-.. ..+ ...+..+.+|+.++++++.+ + +||++.|||. ++++.++++. +|||.+|+
T Consensus 129 ~~~a~~~g~d~v~~~~v~~---t~~--~~~~~~~~~~~~l~~~~~~~-~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYP---TET--KKDTRAVQGVSLIEAVRRQG-ISIPIVGIGGIT-IDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp HHHHHHHTCSEEEECCSSC---CCS--SSSCCCCCTTHHHHHHHHTT-CCCCEEEESSCC-TTTSHHHHHTTCSEEEESH
T ss_pred HHHHHhCCCCEEEECCCcC---CCC--CCCCCCccCHHHHHHHHHhC-CCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhH
Confidence 5567789999998732110 000 00112346899999999887 6 9999999999 9999998876 99999999
Q ss_pred hhhhCCc
Q psy2386 216 EAYKNPF 222 (311)
Q Consensus 216 a~l~~P~ 222 (311)
+++..+.
T Consensus 202 ~i~~~~d 208 (227)
T 2tps_A 202 AISQAED 208 (227)
T ss_dssp HHHTSSC
T ss_pred HhhcCCC
Confidence 9986543
No 201
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.20 E-value=1.2e-05 Score=76.54 Aligned_cols=144 Identities=9% Similarity=0.056 Sum_probs=110.3
Q ss_pred CCCeEEEec-CCC--HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEE
Q psy2386 45 EHPIAFQVG-DNE--PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITV 119 (311)
Q Consensus 45 ~~p~~~Ql~-g~~--~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsv 119 (311)
..|+-..++ +.+ |+.+++.|+.+.+.||..|.++++ | -.| .+.++++|+++ ++++.|
T Consensus 149 ~v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~-------------~~d----~~~v~avR~a~G~~~~L~v 210 (400)
T 3mwc_A 149 YIESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P-------------GWD----VEPLQETRRAVGDHFPLWT 210 (400)
T ss_dssp EEEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T-------------TBS----HHHHHHHHHHHCTTSCEEE
T ss_pred eEEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c-------------chH----HHHHHHHHHhcCCCCEEEE
Confidence 345556665 346 999999998888889999999873 1 123 45677777776 578999
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
...-+|+.. + .++++.+++.|+.+|- + ..++.|++..+++++.. ++||.+...+.+++
T Consensus 211 DaN~~w~~~----~-~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 268 (400)
T 3mwc_A 211 DANSSFELD----Q-WETFKAMDAAKCLFHE--------Q--------PLHYEALLDLKELGERI-ETPICLDESLISSR 268 (400)
T ss_dssp ECTTCCCGG----G-HHHHHHHGGGCCSCEE--------S--------CSCTTCHHHHHHHHHHS-SSCEEESTTCCSHH
T ss_pred eCCCCCCHH----H-HHHHHHHHhcCCCEEe--------C--------CCChhhHHHHHHHHhhC-CCCEEEeCCcCCHH
Confidence 988888753 4 5889999999999883 1 12335899999999998 79999999999999
Q ss_pred HHHHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 200 EIDLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 200 da~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
++.++++. +|.|++--+-.+...=..++.
T Consensus 269 ~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia 299 (400)
T 3mwc_A 269 VAEFVAKLGISNIWNIKIQRVGGLLEAIKIY 299 (400)
T ss_dssp HHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEEcchhhCCHHHHHHHH
Confidence 99999975 999999877766655444443
No 202
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=98.18 E-value=1.5e-05 Score=75.75 Aligned_cols=151 Identities=9% Similarity=-0.043 Sum_probs=112.9
Q ss_pred CCCCeEEEec---CCC--HH----HHHHHHHHHHHcCCCEEEec-cCCCccccccCcccCcccCChHHHHHHHHHHhccc
Q psy2386 44 EEHPIAFQVG---DNE--PK----KLAKSAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV 113 (311)
Q Consensus 44 ~~~p~~~Ql~---g~~--~~----~~~~aa~~~~~~g~d~IdiN-~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~ 113 (311)
+..|+-..++ +.+ ++ .+++.++...+.||..|-++ .|-+ ..+++.-.+++++||+++
T Consensus 131 ~~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~ 197 (394)
T 3mqt_A 131 AQLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVI 197 (394)
T ss_dssp SSBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHh
Confidence 3455556665 233 44 66667777778899999994 3311 135777888999999987
Q ss_pred --cceeEEEEeccC-CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE
Q psy2386 114 --EIDITVKHRIGI-DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII 190 (311)
Q Consensus 114 --~~pvsvKiR~g~-~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi 190 (311)
++++.|...-+| +. ++..++++.+++.|+++|. + ..++.|++..+++++.+ ++||+
T Consensus 198 G~d~~l~vDan~~~~~~----~~A~~~~~~L~~~~i~~iE--------e--------P~~~~~~~~~~~l~~~~-~iPIa 256 (394)
T 3mqt_A 198 GWDMDMMVDCLYRWTDW----QKARWTFRQLEDIDLYFIE--------A--------CLQHDDLIGHQKLAAAI-NTRLC 256 (394)
T ss_dssp CSSSEEEEECTTCCSCH----HHHHHHHHHTGGGCCSEEE--------S--------CSCTTCHHHHHHHHHHS-SSEEE
T ss_pred CCCCeEEEECCCCCCCH----HHHHHHHHHHhhcCCeEEE--------C--------CCCcccHHHHHHHHhhC-CCCEE
Confidence 678999888888 43 2568999999999999883 1 11235889999999998 79999
Q ss_pred EecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 191 INGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 191 ~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
+.+.+.|++++.++++. ||.|++--+-.+...=..++.
T Consensus 257 ~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia 296 (394)
T 3mqt_A 257 GAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIM 296 (394)
T ss_dssp ECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHH
T ss_pred eCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHH
Confidence 99999999999999975 999999766666655444443
No 203
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.15 E-value=4.1e-05 Score=72.58 Aligned_cols=145 Identities=10% Similarity=0.073 Sum_probs=110.9
Q ss_pred CHHHHHHHH-HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 56 EPKKLAKSA-KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 56 ~~~~~~~aa-~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
+|++.++.+ +...+.||..|-+..|++.. ......|+...++++++|+++ ++++.|...-+|+..
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~--------~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~---- 213 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVG--------RNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPD---- 213 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTC--------TTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHH----
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCcc--------cccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHH----
Confidence 576655544 44457899999999998642 122234677788999999987 678999988888743
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 210 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adg 210 (311)
+..++++.+++.|+.+|- + ..++.|++..+++++.+ .+||.+...+.|..++.++++. +|.
T Consensus 214 ~A~~~~~~l~~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~ 276 (388)
T 3tcs_A 214 RAIEVGHMLQDHGFCHFE--------E--------PCPYWELAQTKQVTDAL-DIDVTGGEQDCDLPTWQRMIDMRAVDI 276 (388)
T ss_dssp HHHHHHHHHHHTTCCEEE--------C--------CSCTTCHHHHHHHHHHC-SSCEEECTTCCCHHHHHHHHHHTCCSE
T ss_pred HHHHHHHHHhhcCCeEEE--------C--------CCCccCHHHHHHHHHhc-CCCEEcCCccCCHHHHHHHHHcCCCCE
Confidence 568999999999998872 1 12235899999999998 7999999999999999999975 999
Q ss_pred EEEehhhhhCCcchHHhHh
Q psy2386 211 VMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 211 VmigRa~l~~P~i~~~~~~ 229 (311)
|++--+-.+...=..++.+
T Consensus 277 v~~d~~~~GGit~a~kia~ 295 (388)
T 3tcs_A 277 VQPDILYLGGICRTLRVVE 295 (388)
T ss_dssp ECCCHHHHTSHHHHHHHHH
T ss_pred EEeCccccCCHHHHHHHHH
Confidence 9998776666665555544
No 204
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.14 E-value=3.3e-05 Score=70.47 Aligned_cols=147 Identities=12% Similarity=0.146 Sum_probs=89.4
Q ss_pred CCCeEEEecCCCH-------HHHHHHHHHHHHcCCCEEEec--cCCCccccccCcccCcccCChHHHHHHHHHHhccccc
Q psy2386 45 EHPIAFQVGDNEP-------KKLAKSAKIIQKWGYDEINLN--CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI 115 (311)
Q Consensus 45 ~~p~~~Ql~g~~~-------~~~~~aa~~~~~~g~d~IdiN--~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~ 115 (311)
+.|+|+.+.++++ +.+...++.+.+.|+|+|++. .|-+.. -...+.+.++++++.+. ++
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~-----------~~~l~~i~~v~~~a~~~-Gl 172 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYE-----------HQSIKNIIQLVDAGMKV-GM 172 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTH-----------HHHHHHHHHHHHHHHTT-TC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCcH-----------HHHHHHHHHHHHHHHHc-CC
Confidence 6789999987662 112223455668899998875 441110 01123344555555443 78
Q ss_pred eeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC
Q psy2386 116 DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 195 (311)
Q Consensus 116 pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI 195 (311)
||.+=...|.....+.+.....++...+.|+|+|... |++ .. ++++.+.. .+||++.||+
T Consensus 173 pvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~--------~t~--------e~---~~~vv~~~-~vPVv~~GG~ 232 (295)
T 3glc_A 173 PTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY--------YVE--------KG---FERIVAGC-PVPIVIAGGK 232 (295)
T ss_dssp CEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE--------CCT--------TT---HHHHHHTC-SSCEEEECCS
T ss_pred EEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC--------CCH--------HH---HHHHHHhC-CCcEEEEECC
Confidence 8877432221111112223457788889999999664 111 12 46677777 6999999999
Q ss_pred C-CHHHHHHHH----hh-cCEEEEehhhhhCCcc
Q psy2386 196 K-TKKEIDLHL----NY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 196 ~-s~~da~~~l----~~-adgVmigRa~l~~P~i 223 (311)
. +.+++.++. +. |+||.+||.++..|..
T Consensus 233 ~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 233 KLPEREALEMCWQAIDQGASGVDMGRNIFQSDHP 266 (295)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCH
Confidence 8 555555554 33 9999999999976653
No 205
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.14 E-value=4e-06 Score=90.33 Aligned_cols=116 Identities=13% Similarity=0.077 Sum_probs=79.9
Q ss_pred CChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCc-CCCCCcCcH
Q psy2386 97 TKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ-NRKIPILKY 174 (311)
Q Consensus 97 ~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~-~~~~~~~~~ 174 (311)
.+++.+.++++.+++.. ++||.||+-.... ..+.++.+.++|+|+|+|.|..+.. +-++.. ....+..-.
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g-------i~~~A~~a~kAGAD~IvVsG~eGGT-gasp~~~~~~~GlPt~ 1081 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEIG-------IGTIAAGVAKANADIIQISGHDGGT-GASPLSSIKHAGSPWE 1081 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECSTT-------HHHHHHHHHHTTCSEEEEECTTCCC-SSEEHHHHHHBCCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCCC-------hHHHHHHHHHcCCCEEEEeCCCCcc-CCCcchhhcCCchhHH
Confidence 45677889999999988 8999999876421 2456788999999999997653200 000000 000011112
Q ss_pred HHHHHHHHhC------CCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC
Q psy2386 175 NFVYNLKKDF------PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN 220 (311)
Q Consensus 175 ~~i~~i~~~~------~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~ 220 (311)
..+.++.+.+ .++|||+.|||.|..|+.+++.. ||+|++||+++.-
T Consensus 1082 ~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a 1134 (1520)
T 1ofd_A 1082 LGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIA 1134 (1520)
T ss_dssp HHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHH
Confidence 4455554432 15999999999999999999987 9999999998663
No 206
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.12 E-value=1.2e-05 Score=77.21 Aligned_cols=164 Identities=10% Similarity=0.013 Sum_probs=115.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccc---cCcccC--------ccc--------CChHHHHHH
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ---NGFFGA--------ILM--------TKPLLVSDC 105 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~---~~~~G~--------~Ll--------~~~~~~~~i 105 (311)
..|+-....+.+++++.+.++...+.||..|-+..|.|..... ..+.|- .+- +..+...++
T Consensus 138 ~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 138 GVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 4466667788899998888877778899999999988742110 001110 000 112456688
Q ss_pred HHHHhccc--cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh
Q psy2386 106 IKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD 183 (311)
Q Consensus 106 v~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~ 183 (311)
+++||+++ ++++.|...-+|+. ++..++++.+++.|+++|-- ..++.|++..+++++.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~~----~~A~~~~~~L~~~~i~~iEe----------------P~~~~d~~~~~~l~~~ 277 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLTP----IEAARFGKSVEDYRLFWMED----------------PTPAENQACFRLIRQH 277 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSCH----HHHHHHHHHTGGGCCSEEEC----------------CSCCSSGGGGHHHHTT
T ss_pred HHHHHHHhCCCCEEEEECCCCCCH----HHHHHHHHHHhhcCCCEEEC----------------CCChHHHHHHHHHHhc
Confidence 99999988 68899988878864 35788999999999998831 1123478888999998
Q ss_pred CCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHh
Q psy2386 184 FPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 184 ~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~ 229 (311)
+ ++||.+.+.+.+++++.++++. ||.|++--+-.+...-..++.+
T Consensus 278 ~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~ 324 (426)
T 4e4f_A 278 T-VTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIAD 324 (426)
T ss_dssp C-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred C-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHH
Confidence 8 7999999999999999999975 9999987666555554444443
No 207
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=98.12 E-value=1.8e-05 Score=75.27 Aligned_cols=136 Identities=8% Similarity=-0.066 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHcCCCEEEec-cCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccC-CCCCcHHHH
Q psy2386 59 KLAKSAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGI-DDINSYDFV 134 (311)
Q Consensus 59 ~~~~aa~~~~~~g~d~IdiN-~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~-~~~~~~~~~ 134 (311)
.+++.++...+.||..+-++ .|.+ ..+++.-.++++++|+++ ++++.|...-+| +. ++.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~----~~A 222 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDW----YEV 222 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCH----HHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCH----HHH
Confidence 66667777778899999994 3321 135777788999999987 678888888788 43 356
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVM 212 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVm 212 (311)
.++++.+++.|+++|- + ..++.|++..+++++.+ ++||++.+.+.|++++.++++. ||.|+
T Consensus 223 ~~~~~~L~~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ 285 (394)
T 3mkc_A 223 ARLLNSIEDLELYFAE--------A--------TLQHDDLSGHAKLVENT-RSRICGAEMSTTRFEAEEWITKGKVHLLQ 285 (394)
T ss_dssp HHHHHHTGGGCCSEEE--------S--------CSCTTCHHHHHHHHHHC-SSCBEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred HHHHHHhhhcCCeEEE--------C--------CCCchhHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCeEe
Confidence 8999999999999883 1 11235889999999998 7999999999999999999975 99999
Q ss_pred EehhhhhCCcchHHhH
Q psy2386 213 LGREAYKNPFLMSNFD 228 (311)
Q Consensus 213 igRa~l~~P~i~~~~~ 228 (311)
+--+-.+...=..++.
T Consensus 286 ~k~~~~GGit~~~~ia 301 (394)
T 3mkc_A 286 SDYNRCGGLTELRRIT 301 (394)
T ss_dssp CCTTTTTHHHHHHHHH
T ss_pred cCccccCCHHHHHHHH
Confidence 9765555544444443
No 208
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.09 E-value=1.9e-05 Score=88.46 Aligned_cols=148 Identities=12% Similarity=0.045 Sum_probs=103.0
Q ss_pred CCCCeEEEecCCCHHH---HHHHHHHHHHcCCCE--EEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeE
Q psy2386 44 EEHPIAFQVGDNEPKK---LAKSAKIIQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDIT 118 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~---~~~aa~~~~~~g~d~--IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvs 118 (311)
.+.|+++.++-.+|+. +.+..+.+.+.|++. |.+..|.|. ++ ++++.+++ .++++.
T Consensus 636 ~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~---------------~e---~~~~~l~~-~gi~~i 696 (2060)
T 2uva_G 636 PGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS---------------IE---VANEYIQT-LGIRHI 696 (2060)
T ss_dssp TTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC---------------HH---HHHHHHHH-SCCSEE
T ss_pred cCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCC---------------HH---HHHHHHHH-cCCeEE
Confidence 4689999999877653 456667778889988 888877763 22 23333443 377765
Q ss_pred EEEeccCCCCCcHHHHHHHHHHHHHcCCCEEE---EecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC
Q psy2386 119 VKHRIGIDDINSYDFVRDFVGTVSSAGCRTFI---VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI 195 (311)
Q Consensus 119 vKiR~g~~~~~~~~~~~e~~~~l~~~G~~~it---vh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI 195 (311)
. +-.+. .+..+.+..+.++|+|.|+ +.|.. .+|..|.+.. ...-+..+.++++.+ ++|||+.|||
T Consensus 697 ~-~v~~~------~~a~~~v~~l~~aG~D~iV~~q~~G~e--aGGH~g~~d~--~~~~l~lv~~i~~~~-~ipviaaGGI 764 (2060)
T 2uva_G 697 S-FKPGS------VDAIQQVINIAKANPTFPIILQWTGGR--GGGHHSFEDF--HQPILLMYSRIRKCS-NIVLVAGSGF 764 (2060)
T ss_dssp E-ECCCS------HHHHHHHHHHHHHCTTSCEEEEECCTT--SSSSCCSCCS--HHHHHHHHHHHHTST-TEEEEEESSC
T ss_pred E-ecCCH------HHHHHHHHHHHHcCCCEEEEeeeEccc--CCCCCCcccc--cchHHHHHHHHHHHc-CCCEEEeCCC
Confidence 3 22221 1356667778999999998 66654 2343332110 012357889999988 8999999999
Q ss_pred CCHHHHHHHH-----------hh-cCEEEEehhhhhCCc
Q psy2386 196 KTKKEIDLHL-----------NY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 196 ~s~~da~~~l-----------~~-adgVmigRa~l~~P~ 222 (311)
.|.+++.+++ .. |||||+|+.++.-+.
T Consensus 765 ~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~E 803 (2060)
T 2uva_G 765 GGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKE 803 (2060)
T ss_dssp CSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTT
T ss_pred CCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcC
Confidence 9999999999 55 999999999876554
No 209
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.09 E-value=5.9e-05 Score=71.30 Aligned_cols=146 Identities=12% Similarity=0.064 Sum_probs=108.3
Q ss_pred CCeEEEecCCCHHHH-HHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 46 HPIAFQVGDNEPKKL-AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~-~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
.|+-..++..+++.+ .++++.+.+.||..|-+..|+. +++.-.+.++++|+++ ++++.|...
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 445455555566654 4555555657999999987752 3455567788888877 478889888
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
-+|+.. +..++++.+++.|+.+|- + ..++.||+..+++++.. ++||.+...+.++.|+.
T Consensus 203 ~~~~~~----~A~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 261 (382)
T 3dgb_A 203 QAWDEA----VALRACRILGGNGIDLIE--------Q--------PISRNNRAGMVRLNASS-PAPIMADESIECVEDAF 261 (382)
T ss_dssp TCBCHH----HHHHHHHHHHTTTCCCEE--------C--------CBCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHH
T ss_pred CCCCHH----HHHHHHHHHhhcCcCeee--------C--------CCCccCHHHHHHHHHhC-CCCEEeCCCcCCHHHHH
Confidence 888743 567899999999988882 1 12345899999999998 79999999999999999
Q ss_pred HHHhh--cCEEEEehhhhhCCcchHHh
Q psy2386 203 LHLNY--IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 203 ~~l~~--adgVmigRa~l~~P~i~~~~ 227 (311)
++++. +|.|++--+-.+...=..++
T Consensus 262 ~~~~~~~~d~v~~k~~~~GGit~~~~i 288 (382)
T 3dgb_A 262 NLAREGAASVFALKIAKNGGPRATLRT 288 (382)
T ss_dssp HHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHHcCCCCEEEecccccCCHHHHHHH
Confidence 99975 99999976665554433333
No 210
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.04 E-value=0.0002 Score=63.76 Aligned_cols=146 Identities=9% Similarity=0.111 Sum_probs=96.5
Q ss_pred CCCeEEEecC-CCHHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 45 EHPIAFQVGD-NEPKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~g-~~~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
.-++...-.| ++.++...++++..+. |-+.|.|- +..+. -.|+-|+....+-.+.+.+. +..|...+-
T Consensus 63 ~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlE-------vi~d~--~~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~~ 132 (268)
T 2htm_A 63 GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLE-------VIPDP--TYLLPDPLETLKAAERLIEE-DFLVLPYMG 132 (268)
T ss_dssp TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCC-------CCSCT--TTTCCCHHHHHHHHHHHHHT-TCEECCEEC
T ss_pred hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeee-------eccCc--cccCcCHHHHHHHHHHHHHC-CCEEeeccC
Confidence 5566666666 6889999999987764 44665443 11111 12666766655555555443 433221121
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC-CeEEEecCCCCHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKKEI 201 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~-ipvi~nGgI~s~~da 201 (311)
++ ..+++++++.|++.|.--+.-- | +| .+..+.+.+..+++..++ +|||.-|||.|++|+
T Consensus 133 -----~D-----~~~ak~l~~~G~~aVmPlg~pI---G-sG-----~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDA 193 (268)
T 2htm_A 133 -----PD-----LVLAKRLAALGTATVMPLAAPI---G-SG-----WGVRTRALLELFAREKASLPPVVVDAGLGLPSHA 193 (268)
T ss_dssp -----SC-----HHHHHHHHHHTCSCBEEBSSST---T-TC-----CCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHH
T ss_pred -----CC-----HHHHHHHHhcCCCEEEecCccC---c-CC-----cccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHH
Confidence 11 4789999999999995433311 1 01 112367789999982248 999999999999999
Q ss_pred HHHHhh-cCEEEEehhhhh
Q psy2386 202 DLHLNY-IDGVMLGREAYK 219 (311)
Q Consensus 202 ~~~l~~-adgVmigRa~l~ 219 (311)
..+++. ||||++|+|+..
T Consensus 194 a~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 194 AEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp HHHHHTTCCEEEESHHHHT
T ss_pred HHHHHcCCCEEEEChHHhC
Confidence 999987 999999999864
No 211
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.00 E-value=8.1e-06 Score=77.50 Aligned_cols=133 Identities=8% Similarity=0.009 Sum_probs=100.2
Q ss_pred ecCCCH-------HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEe
Q psy2386 52 VGDNEP-------KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHR 122 (311)
Q Consensus 52 l~g~~~-------~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR 122 (311)
+.+.+| +.++++|+.+.+.||+.|.++.|-..... .. .++++...++++++|+.+ ++++.+...
T Consensus 137 ~~~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~------~~-~~~~~~~~e~v~avR~~~g~d~~l~vDan 209 (392)
T 3p3b_A 137 FDDLHLADERAAVALMQEEAMQGYAKGQRHFKIKVGRGGRHM------PL-WEGTKRDIAIVRGISEVAGPAGKIMIDAN 209 (392)
T ss_dssp BTTTTCCSHHHHHHHHHHHHHHHHHTTCCCEEEECCHHHHTS------CH-HHHHHHHHHHHHHHHHHHCTTCCEEEECT
T ss_pred cCCCCcccccchHHHHHHHHHHHHHhCCCEEEECcCcCcccC------Cc-cccHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 334678 99999999998999999999866321000 00 235677788999999877 577777766
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh-----CCCCeEEEecCCCC
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-----FPELEIIINGGIKT 197 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~-----~~~ipvi~nGgI~s 197 (311)
-+|+. ++..++++.+++.|+++|- +. .+ .|++..+++++. . ++||.+.+ +.+
T Consensus 210 ~~~~~----~~ai~~~~~l~~~~i~~iE---------------~P-~~-~d~~~~~~l~~~l~~~g~-~iPIa~dE-~~~ 266 (392)
T 3p3b_A 210 NAYNL----NLTKEVLAALSDVNLYWLE---------------EA-FH-EDEALYEDLKEWLGQRGQ-NVLIADGE-GLA 266 (392)
T ss_dssp TCCCH----HHHHHHHHHTTTSCEEEEE---------------CS-SS-CCHHHHHHHHHHHHHHTC-CCEEEECC-SSC
T ss_pred CCCCH----HHHHHHHHHHHhcCCCEEe---------------cC-Cc-ccHHHHHHHHHhhccCCC-CccEEecC-CCC
Confidence 56653 3578899999998888762 10 12 478889999988 7 79999999 999
Q ss_pred HHHHHHHHhh--cCEEEEe
Q psy2386 198 KKEIDLHLNY--IDGVMLG 214 (311)
Q Consensus 198 ~~da~~~l~~--adgVmig 214 (311)
++++.++++. +|.|++=
T Consensus 267 ~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 267 SPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp CTTHHHHHHTTSCCEECCB
T ss_pred HHHHHHHHHcCCCCEEEeC
Confidence 9999999975 9999873
No 212
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=97.99 E-value=5.2e-05 Score=72.56 Aligned_cols=155 Identities=9% Similarity=0.018 Sum_probs=114.5
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCcccccc-----CcccCccc---CChHHHHHHHHHHhccc--
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQN-----GFFGAILM---TKPLLVSDCIKAMRDSV-- 113 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~-----~~~G~~Ll---~~~~~~~~iv~~v~~~~-- 113 (311)
+..|+...+.+.+++++.+.++...+.||..+-+..|.+..+..+ .+...... ++++...+.++++|+++
T Consensus 141 ~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~ 220 (421)
T 4hnl_A 141 TAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN 220 (421)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence 345777788889999999999998889999999999976433221 11111122 23456667888888887
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
++.+.|...-+|+. ++..++++.+++.++.++- + ..++-|++..+++++.. ++||.+.-
T Consensus 221 ~~~l~vDan~~~~~----~~A~~~~~~l~~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~ipIa~dE 279 (421)
T 4hnl_A 221 QFQMLHDVHERLHP----NQAIQFAKAAEPYQLFFLE--------D--------ILPPDQSHWLTQLRSQS-ATPIATGE 279 (421)
T ss_dssp SSEEEEECTTCSCH----HHHHHHHHHHGGGCCSEEE--------C--------CSCGGGGGGHHHHHTTC-CCCEEECT
T ss_pred CceEeccccccCCH----HHHHHHHHHhhhhhhcccc--------c--------CCcccchHHHHHHHhcC-CCCeecCc
Confidence 46677766666754 3578999999999988872 1 12335788899999988 79999999
Q ss_pred CCCCHHHHHHHHhh--cCEEEEehhhhh
Q psy2386 194 GIKTKKEIDLHLNY--IDGVMLGREAYK 219 (311)
Q Consensus 194 gI~s~~da~~~l~~--adgVmigRa~l~ 219 (311)
.+.++.++.++++. +|.|++-=.-.+
T Consensus 280 ~~~~~~~~~~~i~~~a~d~v~~d~~~~G 307 (421)
T 4hnl_A 280 LFNNPMEWQELVKNRQIDFMRAHVSQIG 307 (421)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCGGGGT
T ss_pred ceehhHHHHHHHhcCCceEEEeCCCCCC
Confidence 99999999999976 999987543333
No 213
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.98 E-value=0.00019 Score=67.76 Aligned_cols=148 Identities=11% Similarity=0.091 Sum_probs=107.9
Q ss_pred CCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 45 EHPIAFQVGDNEPKKLAKSA-KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa-~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
..|+-..+...+++.+.+.+ +.+.+.||..|-+..|+. +++.-.+.++++|+++ ++++.|..
T Consensus 136 ~v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDa 200 (381)
T 3fcp_A 136 ALPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDV 200 (381)
T ss_dssp EEEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred ceeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 34555566666777655444 444457999999987752 3455667888999887 47888888
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+. ++..++++.+++.|+.+|- + ..++.||+..+++++.. ++||.+...+.+..|+
T Consensus 201 N~~~~~----~~A~~~~~~l~~~~i~~iE--------e--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 259 (381)
T 3fcp_A 201 NQAWDA----ATGAKGCRELAAMGVDLIE--------Q--------PVSAHDNAALVRLSQQI-ETAILADEAVATAYDG 259 (381)
T ss_dssp TTCBCH----HHHHHHHHHHHHTTCSEEE--------C--------CBCTTCHHHHHHHHHHS-SSEEEESTTCCSHHHH
T ss_pred CCCCCH----HHHHHHHHHHhhcCcccee--------C--------CCCcccHHHHHHHHHhC-CCCEEECCCcCCHHHH
Confidence 888874 3568899999999998882 1 12335899999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCcchHHhH
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~i~~~~~ 228 (311)
.++++. +|.|++--+-.+...=..++.
T Consensus 260 ~~~~~~~a~d~v~~k~~~~GGit~~~~ia 288 (381)
T 3fcp_A 260 YQLAQQGFTGAYALKIAKAGGPNSVLALA 288 (381)
T ss_dssp HHHHHTTCCSEEEECHHHHTSTTHHHHHH
T ss_pred HHHHHcCCCCEEEecccccCCHHHHHHHH
Confidence 999975 999999877776666555444
No 214
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.96 E-value=9.2e-05 Score=65.19 Aligned_cols=144 Identities=15% Similarity=0.103 Sum_probs=97.5
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc-----------cccCcccCcccCChHHHHHHHHH------
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----------VQNGFFGAILMTKPLLVSDCIKA------ 108 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~-----------v~~~~~G~~Ll~~~~~~~~iv~~------ 108 (311)
.+++.=|.+.++++..+.++.+.+.|++.||+-+--|... ...-|.|+- + +++.+...+++
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV-l-t~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI-L-NGEQALAAKEAGATFVV 111 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECC-C-SHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc-C-CHHHHHHHHHcCCCEEE
Confidence 5788889999999999999999999999999976544210 012234442 2 45555544443
Q ss_pred -----------HhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 109 -----------MRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 109 -----------v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
.++. ++|+..-+. + ..| +....++|+|+|.+.+-.. .. ..+++
T Consensus 112 sP~~~~~vi~~~~~~-gi~~ipGv~-------T---ptE-i~~A~~~Gad~vK~FPa~~-~g-------------G~~~l 165 (232)
T 4e38_A 112 SPGFNPNTVRACQEI-GIDIVPGVN-------N---PST-VEAALEMGLTTLKFFPAEA-SG-------------GISMV 165 (232)
T ss_dssp CSSCCHHHHHHHHHH-TCEEECEEC-------S---HHH-HHHHHHTTCCEEEECSTTT-TT-------------HHHHH
T ss_pred eCCCCHHHHHHHHHc-CCCEEcCCC-------C---HHH-HHHHHHcCCCEEEECcCcc-cc-------------CHHHH
Confidence 2221 444433222 1 122 4455788999998865431 11 35889
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhh
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 218 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l 218 (311)
+.++..+|++|++..|||. ++.+.++++. +.++.+|+.+.
T Consensus 166 kal~~p~p~ip~~ptGGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 166 KSLVGPYGDIRLMPTGGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp HHHHTTCTTCEEEEBSSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred HHHHHHhcCCCeeeEcCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 9999988889999999995 8999999986 88888886554
No 215
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=97.92 E-value=0.00013 Score=70.38 Aligned_cols=139 Identities=9% Similarity=-0.030 Sum_probs=108.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
|.+|+++++.|+...+.||..|-++.|+ +++.-.+.++++|+++ ++++.|...-+|+..
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~--- 259 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVP--- 259 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHH---
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHH---
Confidence 5699999999998888899999999775 3455566788888886 578888888888743
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh---CCCCeEEEecCCCCHHHHHHHHhh-
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD---FPELEIIINGGIKTKKEIDLHLNY- 207 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~---~~~ipvi~nGgI~s~~da~~~l~~- 207 (311)
+..++++.+++.++.+|- + ..++-|++..+++++. . ++||.+.-.+.|..++.++++.
T Consensus 260 -~A~~~~~~L~~~~~~~iE---------------e-P~~~~d~~~~~~l~~~l~~~-~iPIa~gE~~~~~~~~~~~l~~~ 321 (441)
T 4a35_A 260 -EAVEWMSKLAKFKPLWIE---------------E-PTSPDDILGHATISKALVPL-GIGIATGEQCHNRVIFKQLLQAK 321 (441)
T ss_dssp -HHHHHHHHHGGGCCSEEE---------------C-CSCTTCHHHHHHHHHHHGGG-TCEEEECTTCCSHHHHHHHHHTT
T ss_pred -HHHHHHHhhcccCccEEe---------------C-CCCcccHHHHHHHHHhccCC-CCCEEeCCccccHHHHHHHHHcC
Confidence 568999999999988881 1 1223578888888886 5 6999999999999999999975
Q ss_pred -cCEEEEehhhhhCCcchHHhHh
Q psy2386 208 -IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 208 -adgVmigRa~l~~P~i~~~~~~ 229 (311)
+|.|++--+-.+...=..++.+
T Consensus 322 a~div~~d~~~~GGit~~~kia~ 344 (441)
T 4a35_A 322 ALQFLQIDSCRLGSVNENLSVLL 344 (441)
T ss_dssp CCSEECCCTTTSSHHHHHHHHHH
T ss_pred CCCEEEECccccCCHHHHHHHHH
Confidence 9999987655555544444443
No 216
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.92 E-value=0.00013 Score=64.39 Aligned_cols=136 Identities=13% Similarity=0.062 Sum_probs=87.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEEEEeccCCCCCcH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsvKiR~g~~~~~~~ 131 (311)
...+.-..-++.+.+.|+|.||+.+- .|+.. . .+.+=+.++++.+ +.|+-|=+-.+.-. .
T Consensus 85 ~~~~~k~~e~~~Av~~GAdEID~vin----------ig~~~-~---~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~---~ 147 (234)
T 1n7k_A 85 APLEVKLVEAQTVLEAGATELDVVPH----------LSLGP-E---AVYREVSGIVKLAKSYGAVVKVILEAPLWD---D 147 (234)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEECCC----------GGGCH-H---HHHHHHHHHHHHHHHTTCEEEEECCGGGSC---H
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEecc----------chHHH-H---HHHHHHHHHHHHHhhcCCeEEEEEeccCCC---H
Confidence 34454555566777889999998521 22211 1 4444455555554 35653333333222 2
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHH--HHHhCCCCeEEEecCCCCHHHHHHHHhh-c
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYN--LKKDFPELEIIINGGIKTKKEIDLHLNY-I 208 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~--i~~~~~~ipvi~nGgI~s~~da~~~l~~-a 208 (311)
++....++...++|+|+|... .||++. +.+..+.++- +++.+. +||-+.|||+|.+|+.++++. +
T Consensus 148 e~i~~a~ria~eaGADfVKTs------TG~~~~-----~gAt~~dv~l~~m~~~v~-v~VKaaGGirt~~~al~~i~aGa 215 (234)
T 1n7k_A 148 KTLSLLVDSSRRAGADIVKTS------TGVYTK-----GGDPVTVFRLASLAKPLG-MGVKASGGIRSGIDAVLAVGAGA 215 (234)
T ss_dssp HHHHHHHHHHHHTTCSEEESC------CSSSCC-----CCSHHHHHHHHHHHGGGT-CEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeC------CCCCCC-----CCCCHHHHHHHHHHHHHC-CCEEEecCCCCHHHHHHHHHcCc
Confidence 356778888899999999542 333320 1256666666 777774 999999999999999999976 9
Q ss_pred C--EEEEehhhhh
Q psy2386 209 D--GVMLGREAYK 219 (311)
Q Consensus 209 d--gVmigRa~l~ 219 (311)
+ |+..|+.++.
T Consensus 216 ~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 216 DIIGTSSAVKVLE 228 (234)
T ss_dssp SEEEETTHHHHHH
T ss_pred cccchHHHHHHHH
Confidence 9 7777766553
No 217
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.92 E-value=0.00049 Score=61.12 Aligned_cols=141 Identities=13% Similarity=0.135 Sum_probs=100.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
+.|+.--=|=-||-++.+|. .+|+|.|=|-+.|- +++.+.++++..++ .+..+-|-+..
T Consensus 104 ~lPvLrKDFiid~yQI~eAr----~~GADaILLI~a~L---------------~~~~l~~l~~~A~~-lGl~~LvEVh~- 162 (258)
T 4a29_A 104 SIPILMSDFIVKESQIDDAY----NLGADTVLLIVKIL---------------TERELESLLEYARS-YGMEPLILIND- 162 (258)
T ss_dssp SSCEEEESCCCSHHHHHHHH----HHTCSEEEEEGGGS---------------CHHHHHHHHHHHHH-TTCCCEEEESS-
T ss_pred CCCEeeccccccHHHHHHHH----HcCCCeeehHHhhc---------------CHHHHHHHHHHHHH-HhHHHHHhcch-
Confidence 45554444445566655443 46888888865442 34556677766554 57777775542
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~ 203 (311)
..| ++++.+.|++.|-|..|.- .-+ ..|.+...++...+| ++.+|+-+||.|++|+.+
T Consensus 163 ---------~~E-l~rAl~~~a~iIGINNRnL--~tf---------~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~ 221 (258)
T 4a29_A 163 ---------END-LDIALRIGARFIGIMSRDF--ETG---------EINKENQRKLISMIPSNVVKVAKLGISERNEIEE 221 (258)
T ss_dssp ---------HHH-HHHHHHTTCSEEEECSBCT--TTC---------CBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHH
T ss_pred ---------HHH-HHHHhcCCCcEEEEeCCCc--ccc---------ccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHH
Confidence 123 4556678999999988863 222 268888899998876 588999999999999999
Q ss_pred HHhh-cCEEEEehhhhhCCcchHHh
Q psy2386 204 HLNY-IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 204 ~l~~-adgVmigRa~l~~P~i~~~~ 227 (311)
+.+. +|+|.||.+++.+|.-.+++
T Consensus 222 l~~~G~~a~LVGealmr~~d~~~~L 246 (258)
T 4a29_A 222 LRKLGVNAFLISSSLMRNPEKIKEL 246 (258)
T ss_dssp HHHTTCCEEEECHHHHHCTTHHHHH
T ss_pred HHHCCCCEEEECHHHhCCCcHHHHH
Confidence 9877 99999999999999855444
No 218
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.90 E-value=8.4e-05 Score=65.20 Aligned_cols=168 Identities=15% Similarity=0.102 Sum_probs=105.9
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc-----c------ccCcccCcccCChHHHHHHHH------
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----V------QNGFFGAILMTKPLLVSDCIK------ 107 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~-----v------~~~~~G~~Ll~~~~~~~~iv~------ 107 (311)
+.|++.=|-+.+++++.+.++.+.+.|++.|++-+--|... . ..-++|. ++ +.+.+...++
T Consensus 16 ~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl-~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 16 ELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VL-TAEQVVLAKSSGADFV 93 (224)
T ss_dssp HHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CC-SHHHHHHHHHHTCSEE
T ss_pred HCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-Ee-eHHHHHHHHHCCCCEE
Confidence 35788888889999988888888888999999975433210 0 0112344 22 3444433332
Q ss_pred -----------HHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHH
Q psy2386 108 -----------AMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF 176 (311)
Q Consensus 108 -----------~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~ 176 (311)
..++ .+.|+.+ |.. + ..+ +..+.+.|+|+|.+++-.. . .-.++
T Consensus 94 ~~p~~d~~v~~~ar~-~g~~~i~----Gv~---t---~~e-~~~A~~~Gad~vk~Fpa~~-~-------------gG~~~ 147 (224)
T 1vhc_A 94 VTPGLNPKIVKLCQD-LNFPITP----GVN---N---PMA-IEIALEMGISAVKFFPAEA-S-------------GGVKM 147 (224)
T ss_dssp ECSSCCHHHHHHHHH-TTCCEEC----EEC---S---HHH-HHHHHHTTCCEEEETTTTT-T-------------THHHH
T ss_pred EECCCCHHHHHHHHH-hCCCEEe----ccC---C---HHH-HHHHHHCCCCEEEEeeCcc-c-------------cCHHH
Confidence 2222 2333332 211 1 123 4556788999998876211 0 12578
Q ss_pred HHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHHHHHHH
Q psy2386 177 VYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINRMILYI 254 (311)
Q Consensus 177 i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
+++++..+|++|+++.||| +++.+.++++. +++|. |++++..+.+- ..++.++.+...+++
T Consensus 148 lk~l~~~~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~~~~i~---------------~~~~~~i~~~a~~~~ 210 (224)
T 1vhc_A 148 IKALLGPYAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVEKKLIQ---------------SNNWDEIGRLVREVI 210 (224)
T ss_dssp HHHHHTTTTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCHHHHH---------------TTCHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcCcchhc---------------cCCHHHHHHHHHHHH
Confidence 9999998878999999999 46899999974 99999 98887655431 134556666666666
Q ss_pred HHH
Q psy2386 255 RQQ 257 (311)
Q Consensus 255 ~~~ 257 (311)
+..
T Consensus 211 ~~~ 213 (224)
T 1vhc_A 211 DII 213 (224)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 219
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.88 E-value=0.00012 Score=66.12 Aligned_cols=128 Identities=15% Similarity=0.092 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCccc---CChHHHHHHHHHHhccccceeEEEEec--cCCCCC
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM---TKPLLVSDCIKAMRDSVEIDITVKHRI--GIDDIN 129 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll---~~~~~~~~iv~~v~~~~~~pvsvKiR~--g~~~~~ 129 (311)
...+.-+.=++.+.+.|+|.||+=+ .+|..+- .+.+.+.+-+++++++++ +..+|+=+ +.-.++
T Consensus 97 ~~~e~K~~Ea~~Av~~GAdEIDmVi----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~ 165 (297)
T 4eiv_A 97 GTPDTVSLEAVGALKDGADEIECLI----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGG 165 (297)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeee----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcH
Confidence 3444444445566677999999731 1444444 467888888899988874 44566544 332222
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-----------------------CC
Q psy2386 130 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-----------------------PE 186 (311)
Q Consensus 130 ~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-----------------------~~ 186 (311)
+.....++...++|+|+|--. .|+++ +.+..+.++-+++.+ ++
T Consensus 166 --e~i~~A~~ia~~AGADFVKTS------TGf~~------~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~ 231 (297)
T 4eiv_A 166 --DIISRAAVAALEGGADFLQTS------SGLGA------THATMFTVHLISIALREYMVRENERIRVEGINREGAAVRC 231 (297)
T ss_dssp --HHHHHHHHHHHHHTCSEEECC------CSSSS------CCCCHHHHHHHHHHHHHHHCC------------------C
T ss_pred --HHHHHHHHHHHHhCCCEEEcC------CCCCC------CCCCHHHHHHHHHHHHHHhccccccccccccccccccCCc
Confidence 124567788889999999533 33321 123444333333222 36
Q ss_pred CeEEEe-cCCCCHHHHHHHHhh
Q psy2386 187 LEIIIN-GGIKTKKEIDLHLNY 207 (311)
Q Consensus 187 ipvi~n-GgI~s~~da~~~l~~ 207 (311)
+-|=+. |||+|.+|+.++++.
T Consensus 232 vgvKAs~GGIrt~e~A~~~i~~ 253 (297)
T 4eiv_A 232 IGIKIEVGDVHMAETADFLMQM 253 (297)
T ss_dssp CEEEEECTTCCHHHHHHHHHHH
T ss_pred eeEEecCCCCCCHHHHHHHHHH
Confidence 889999 999999999999975
No 220
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=97.87 E-value=0.00019 Score=67.40 Aligned_cols=137 Identities=11% Similarity=0.101 Sum_probs=103.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
..|+-..+...+|+.+++.++...+.||..|-+..|.. +++.-.+.++++|+.+ +.++.|...-
T Consensus 132 ~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~ 196 (365)
T 3ik4_A 132 QLETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNC 196 (365)
T ss_dssp EEEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTT
T ss_pred ceeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 44556678888999999999888888999999987642 3566667788888876 4456665555
Q ss_pred cCCCCCcHHHHHHHHHHH--HHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTV--SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l--~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
+|+. ++..++++.+ ++.++.+|- + ..++.|++..+++++.. .+||.+.-.+.+++++
T Consensus 197 ~~~~----~~A~~~~~~L~~~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 255 (365)
T 3ik4_A 197 GYDV----ERALAFCAACKAESIPMVLFE---------------Q-PLPREDWAGMAQVTAQS-GFAVAADESARSAHDV 255 (365)
T ss_dssp CCCH----HHHHHHHHHHHHTTCCEEEEE---------------C-CSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHH
T ss_pred CCCH----HHHHHHHHHHhhCCCCceEEE---------------C-CCCcccHHHHHHHHhhC-CCCEEECCCCCCHHHH
Confidence 6653 3567899999 556665552 1 12235899999999998 7999999999999999
Q ss_pred HHHHhh--cCEEEEehhh
Q psy2386 202 DLHLNY--IDGVMLGREA 217 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~ 217 (311)
.++++. +|.|++==.-
T Consensus 256 ~~~i~~~a~d~v~ik~~~ 273 (365)
T 3ik4_A 256 LRIAREGTASVINIKLMK 273 (365)
T ss_dssp HHHHHHTCCSEEEECHHH
T ss_pred HHHHHhCCCCEEEEcCCc
Confidence 999875 9999986444
No 221
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.85 E-value=0.00017 Score=63.46 Aligned_cols=149 Identities=12% Similarity=0.099 Sum_probs=100.8
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCE--EEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~--IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
+..+|...|...+.++.+.+ +.|+|. ||+=-|.=+++. .+| ..+++++|+.++.|+.|-+-+.
T Consensus 3 i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~---t~G----------~~~v~~lr~~~~~~~dvhLmv~- 67 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNL---TLS----------PFFVSQVKKLATKPLDCHLMVT- 67 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCC---CBC----------HHHHHHHHTTCCSCEEEEEESS-
T ss_pred EEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccc---hhc----------HHHHHHHHhccCCcEEEEEEec-
Confidence 56788899999999999999 889997 565445522221 122 2478888888788888776653
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecCc-cc--------------------------------------------ccc
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHARN-AF--------------------------------------------LKK 160 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt-~~--------------------------------------------~~G 160 (311)
+. ..+++.+.++|+|.+|+|.-. .. ..|
T Consensus 68 -dp------~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pG 140 (231)
T 3ctl_A 68 -RP------QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPG 140 (231)
T ss_dssp -CG------GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTT
T ss_pred -CH------HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccC
Confidence 21 235677788899999988543 10 002
Q ss_pred CCCCcCCCCCcCcHHHHHHHHHhCC----CCeEEEecCCCCHHHHHHHHhh-cCEEEEe-hhhhhCCc
Q psy2386 161 LNPKQNRKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLNY-IDGVMLG-REAYKNPF 222 (311)
Q Consensus 161 ~~g~~~~~~~~~~~~~i~~i~~~~~----~ipvi~nGgI~s~~da~~~l~~-adgVmig-Ra~l~~P~ 222 (311)
+.|. .. .+..++.|+++++... +++|..-|||+ ++.+.++.+. ||.+.+| |+++..+.
T Consensus 141 fggQ--~f-~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 141 FAGQ--PF-IPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp CSSC--CC-CTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGGCS
T ss_pred cCCc--cc-cHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCCCC
Confidence 2211 11 2234666777766531 58999999998 5778888766 9999999 99987544
No 222
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.85 E-value=0.00025 Score=64.92 Aligned_cols=151 Identities=10% Similarity=0.077 Sum_probs=103.3
Q ss_pred CCCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 45 EHPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
+.|+++=+ +| +|+...+.++.+.++|+++|.|-=+.. +|.+. +.++.-+-..+...+-|++++++ +.++.|--
T Consensus 89 ~~pviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iED~~~-~krcG-h~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~A 164 (305)
T 3ih1_A 89 DLPVLVDIDTGFG-GVLNVARTAVEMVEAKVAAVQIEDQQL-PKKCG-HLNGKKLVTTEELVQKIKAIKEV-APSLYIVA 164 (305)
T ss_dssp CCCEEEECTTCSS-SHHHHHHHHHHHHHTTCSEEEEECBCS-SCCTT-CTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCCEEEECCCCCC-CHHHHHHHHHHHHHhCCcEEEECCCCC-CcccC-CCCCCcccCHHHHHHHHHHHHHc-CCCeEEEE
Confidence 46777755 24 588899999999999999999986643 23222 22233344566566666777776 77777777
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe---cC---C
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG---I 195 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---Gg---I 195 (311)
|..-......++.++-++.++++|+|.|.+++.. +.+.++++.+.+ ++|+++| || .
T Consensus 165 Rtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~-----------------~~~~~~~i~~~~-~~P~~~n~~~~g~tp~ 226 (305)
T 3ih1_A 165 RTDARGVEGLDEAIERANAYVKAGADAIFPEALQ-----------------SEEEFRLFNSKV-NAPLLANMTEFGKTPY 226 (305)
T ss_dssp EECCHHHHCHHHHHHHHHHHHHHTCSEEEETTCC-----------------SHHHHHHHHHHS-CSCBEEECCTTSSSCC
T ss_pred eeccccccCHHHHHHHHHHHHHcCCCEEEEcCCC-----------------CHHHHHHHHHHc-CCCEEEeecCCCCCCC
Confidence 7632111224567889999999999999998763 568899999998 7999876 33 3
Q ss_pred CCHHHHHHHHhhcCEEEEehhhhh
Q psy2386 196 KTKKEIDLHLNYIDGVMLGREAYK 219 (311)
Q Consensus 196 ~s~~da~~~l~~adgVmigRa~l~ 219 (311)
.|.++..++ ++..|..|-.++.
T Consensus 227 ~~~~eL~~l--Gv~~v~~~~~~~r 248 (305)
T 3ih1_A 227 YSAEEFANM--GFQMVIYPVTSLR 248 (305)
T ss_dssp CCHHHHHHT--TCSEEEECSHHHH
T ss_pred CCHHHHHHc--CCCEEEEchHHHH
Confidence 454443332 3899999866644
No 223
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.83 E-value=0.00019 Score=65.50 Aligned_cols=153 Identities=14% Similarity=0.127 Sum_probs=101.2
Q ss_pred CCCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 45 EHPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
+.|+++=+ +| +|+...+.++.+.++|+.+|.|-=+.. +|.+..-.|-.|....+.+.+|-.++....+.++.|--
T Consensus 83 ~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~-~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~A 160 (298)
T 3eoo_A 83 NLPLLVDIDTGWG-GAFNIARTIRSFIKAGVGAVHLEDQVG-QKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMA 160 (298)
T ss_dssp CSCEEEECTTCSS-SHHHHHHHHHHHHHTTCSEEEEECBCC-CCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEE
T ss_pred CCeEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEECCCCC-CcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEE
Confidence 46777765 34 899999999999999999999975542 33222222334443344455554443333356777777
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe---cC---C
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG---I 195 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---Gg---I 195 (311)
|..-......++.++-++.+.++|+|.|-+++.+ +.+.++++.+.+ ++||.+| || .
T Consensus 161 RTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~~-----------------~~ee~~~~~~~~-~~Pl~~n~~~~g~tp~ 222 (298)
T 3eoo_A 161 RTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMK-----------------TLDDYRRFKEAV-KVPILANLTEFGSTPL 222 (298)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCC-----------------SHHHHHHHHHHH-CSCBEEECCTTSSSCC
T ss_pred eehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCCC-----------------CHHHHHHHHHHc-CCCeEEEeccCCCCCC
Confidence 8632212234567888899999999999998764 568899999998 6999887 33 3
Q ss_pred CCHHHHHHHHhhcCEEEEehhhhh
Q psy2386 196 KTKKEIDLHLNYIDGVMLGREAYK 219 (311)
Q Consensus 196 ~s~~da~~~l~~adgVmigRa~l~ 219 (311)
.|.++..++ ++..|..|-.++.
T Consensus 223 ~~~~eL~~l--Gv~~v~~~~~~~r 244 (298)
T 3eoo_A 223 FTLDELKGA--NVDIALYCCGAYR 244 (298)
T ss_dssp CCHHHHHHT--TCCEEEECSHHHH
T ss_pred CCHHHHHHc--CCeEEEEchHHHH
Confidence 344443332 3899998866644
No 224
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.77 E-value=0.00063 Score=59.15 Aligned_cols=149 Identities=15% Similarity=0.132 Sum_probs=96.7
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc-----c------ccCcccCcccCChHHHHHHHHH-----
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----V------QNGFFGAILMTKPLLVSDCIKA----- 108 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~-----v------~~~~~G~~Ll~~~~~~~~iv~~----- 108 (311)
+.|++.=|-+.+++++.+.++.+.+.|++.|++-+--|... . ..-++|. ++ +.+.+...+++
T Consensus 15 ~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-vi-~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 15 TGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-VL-NPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-CC-SHHHHHHHHHHTCSCE
T ss_pred HCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-EE-EHHHHHHHHHcCCCEE
Confidence 57899999999999999999999999999999976444211 0 0113333 22 33433333222
Q ss_pred ------------HhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHH
Q psy2386 109 ------------MRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNF 176 (311)
Q Consensus 109 ------------v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~ 176 (311)
.++ .++|+.. |.. + ..| +..+.+.|+|+|.+|+-.. . ...++
T Consensus 93 ~~p~~d~~v~~~~~~-~g~~~i~----G~~---t---~~e-~~~A~~~Gad~v~~Fpa~~-~-------------gG~~~ 146 (214)
T 1wbh_A 93 ISPGLTEPLLKAATE-GTIPLIP----GIS---T---VSE-LMLGMDYGLKEFKFFPAEA-N-------------GGVKA 146 (214)
T ss_dssp EESSCCHHHHHHHHH-SSSCEEE----EES---S---HHH-HHHHHHTTCCEEEETTTTT-T-------------THHHH
T ss_pred EcCCCCHHHHHHHHH-hCCCEEE----ecC---C---HHH-HHHHHHCCCCEEEEecCcc-c-------------cCHHH
Confidence 111 2233322 211 1 123 3555678888888866211 0 12578
Q ss_pred HHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCcc
Q psy2386 177 VYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPFL 223 (311)
Q Consensus 177 i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~i 223 (311)
+++++..+|++|+++.|||+ ++.+.++++. +++|. |++++..+.+
T Consensus 147 lk~i~~~~~~ipvvaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 147 LQAIAGPFSQVRFCPTGGIS-PANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHHHTTCTTCEEEEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHHhhhCCCCeEEEECCCC-HHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 99999988789999999995 6899999974 99999 9988766554
No 225
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.75 E-value=0.00072 Score=61.93 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=85.1
Q ss_pred HHHHHHHHcCCCEEEe--ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec-c--CCCCCcH-HHHH
Q psy2386 62 KSAKIIQKWGYDEINL--NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI-G--IDDINSY-DFVR 135 (311)
Q Consensus 62 ~aa~~~~~~g~d~Idi--N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~-g--~~~~~~~-~~~~ 135 (311)
..++.+.+.|+|+|-+ +.+-..+. .+..+.+.++.+++++ .++|+.+=+-. | ..++... +...
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~----------~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~ 180 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDA----------QQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAII 180 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCH----------HHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccH----------HHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHH
Confidence 4556677889999984 33311100 1223555666666555 48998776532 1 2221222 3455
Q ss_pred HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh----CCCCe-EEEecCCCCHHH----HHHHHh
Q psy2386 136 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD----FPELE-IIINGGIKTKKE----IDLHLN 206 (311)
Q Consensus 136 e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~----~~~ip-vi~nGgI~s~~d----a~~~l~ 206 (311)
+.++.+.+.|+|++.+|.-.. ++ .+++.+.++.+. + .+| |+..||+ +.++ +...++
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~---~~----------g~~~~~~~vv~~~~~~~-~~P~Vv~aGG~-~~~~~~~~~~~a~~ 245 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLY---GK----------GARSDLLTASQRLNGHI-NMPWVILSSGV-DEKLFPRAVRVAME 245 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGG---GC----------SCHHHHHHHHHHHHHTC-CSCEEECCTTS-CTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCcC---CC----------CCHHHHHHHHHhccccC-CCCeEEEecCC-CHHHHHHHHHHHHH
Confidence 668888999999999986421 11 156666666666 6 699 9999999 5644 455554
Q ss_pred h-cCEEEEehhhhhC
Q psy2386 207 Y-IDGVMLGREAYKN 220 (311)
Q Consensus 207 ~-adgVmigRa~l~~ 220 (311)
. ++||.+||+++..
T Consensus 246 aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 246 AGASGFLAGRAVWSS 260 (304)
T ss_dssp TTCCEEEESHHHHGG
T ss_pred cCCeEEEEehHHhCc
Confidence 4 9999999999876
No 226
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=97.74 E-value=0.00059 Score=62.03 Aligned_cols=153 Identities=12% Similarity=0.069 Sum_probs=97.5
Q ss_pred CCCCeEEEec---CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCccc--CcccCChHHHHHHHHHHhccc-ccee
Q psy2386 44 EEHPIAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFG--AILMTKPLLVSDCIKAMRDSV-EIDI 117 (311)
Q Consensus 44 ~~~p~~~Ql~---g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G--~~Ll~~~~~~~~iv~~v~~~~-~~pv 117 (311)
.+.|+++=+= | +|+...+.++.+.++|+.+|.|-=+.. ++++. +.| +.-+-..+...+-|++++++. ..++
T Consensus 74 ~~~PviaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~-~k~cg-H~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~ 150 (290)
T 2hjp_A 74 VSIPLIADIDTGFG-NAVNVHYVVPQYEAAGASAIVMEDKTF-PKDTS-LRTDGRQELVRIEEFQGKIAAATAARADRDF 150 (290)
T ss_dssp CSSCEEEECTTTTS-SHHHHHHHHHHHHHHTCSEEEEECBCS-SCCC--------CCBCCHHHHHHHHHHHHHHCSSTTS
T ss_pred CCCCEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCC-Ccccc-ccccCCCcccCHHHHHHHHHHHHHhcccCCc
Confidence 3578777553 5 899999999988899999999986643 23322 223 333344444444445555442 3455
Q ss_pred EEEEeccCC-CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC--CeEEEe--
Q psy2386 118 TVKHRIGID-DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE--LEIIIN-- 192 (311)
Q Consensus 118 svKiR~g~~-~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~--ipvi~n-- 192 (311)
.|--|..-. .....++.++-++.++++|+|.|.++++.. +.+.++++.+.+ + +|+++|
T Consensus 151 ~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~----------------~~~~~~~i~~~~-~~~vP~i~n~~ 213 (290)
T 2hjp_A 151 VVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQK----------------TPDEILAFVKSW-PGKVPLVLVPT 213 (290)
T ss_dssp EEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCS----------------SSHHHHHHHHHC-CCSSCEEECGG
T ss_pred EEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCC----------------CHHHHHHHHHHc-CCCCCEEEecc
Confidence 565665322 122356788899999999999999998531 457789999998 6 999987
Q ss_pred -cCCCCHHHHHHHHhh-cCEEEEehhhh
Q psy2386 193 -GGIKTKKEIDLHLNY-IDGVMLGREAY 218 (311)
Q Consensus 193 -GgI~s~~da~~~l~~-adgVmigRa~l 218 (311)
+...|.++..++ + +..|..|-.++
T Consensus 214 ~~~~~~~~eL~~l--G~v~~v~~~~~~~ 239 (290)
T 2hjp_A 214 AYPQLTEADIAAL--SKVGIVIYGNHAI 239 (290)
T ss_dssp GCTTSCHHHHHTC--TTEEEEEECSHHH
T ss_pred CCCCCCHHHHHhc--CCeeEEEechHHH
Confidence 334454433322 4 66677776654
No 227
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.73 E-value=0.00025 Score=64.07 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=79.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChH---HHHHHHHHHhccccceeEEEEec--cCCCCCc
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPL---LVSDCIKAMRDSVEIDITVKHRI--GIDDINS 130 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~---~~~~iv~~v~~~~~~pvsvKiR~--g~~~~~~ 130 (311)
+.+.-+.-++.+.+.|+|.||+-+ .+|..+-.+.+ .+.+-+.+++++++ +..+|+=+ +.-.++
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVi----------nig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~- 171 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVI----------NYKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTE- 171 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC----------CHHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec----------chHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcH-
Confidence 344444445667778999999852 13433345567 88888888988874 23455443 222211
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc---HHHHHHHHHh--------CCCCeEEEecCCCCHH
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK---YNFVYNLKKD--------FPELEIIINGGIKTKK 199 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~---~~~i~~i~~~--------~~~ipvi~nGgI~s~~ 199 (311)
+.....++...++|+|+|--. .||++ +.+. .+.+++..+. -++++|-+.|||+|.+
T Consensus 172 -e~i~~A~~ia~eaGADfVKTS------TGf~~------~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e 238 (281)
T 2a4a_A 172 -DLIIKTTLAVLNGNADFIKTS------TGKVQ------INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLN 238 (281)
T ss_dssp -HHHHHHHHHHHTTTCSEEECC------CSCSS------CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHH
T ss_pred -HHHHHHHHHHHHhCCCEEEeC------CCCCC------CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHH
Confidence 124567788889999999543 23331 1133 3444444321 2369999999999999
Q ss_pred HHHHHHhh
Q psy2386 200 EIDLHLNY 207 (311)
Q Consensus 200 da~~~l~~ 207 (311)
|+.++++.
T Consensus 239 ~al~~i~a 246 (281)
T 2a4a_A 239 TASHYILL 246 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999964
No 228
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.72 E-value=0.00026 Score=63.33 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc---ceeEEEEeccCCCCCcHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE---IDITVKHRIGIDDINSYD 132 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~---~pvsvKiR~g~~~~~~~~ 132 (311)
+.+.-..-++.+.+.|+|.||+-+ .+|..+-.+.+.+.+-+.++++.++ .|+-|=+-.+.-.++ +
T Consensus 83 ~~~~Kv~E~~~Av~~GAdEIDmVi----------nig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~--e 150 (260)
T 1p1x_A 83 DIDIALAETRAAIAYGADEVDVVF----------PYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDE--A 150 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSH--H
T ss_pred cHHHHHHHHHHHHHcCCCEEEEec----------cHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcH--H
Confidence 344444445667778999999852 1344444677888888888888763 444333333322221 1
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh-----C-CCCeEEEecCCCCHHHHHHHHh
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-----F-PELEIIINGGIKTKKEIDLHLN 206 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~-----~-~~ipvi~nGgI~s~~da~~~l~ 206 (311)
.....++...++|+|+|--. .||++ +.+..+.++-+++. + ++++|-+.|||+|.+|+.++++
T Consensus 151 ~i~~a~~ia~eaGADfVKTS------TGf~~------~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ 218 (260)
T 1p1x_A 151 LIRKASEISIKAGADFIKTS------TGKVA------VNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA 218 (260)
T ss_dssp HHHHHHHHHHHTTCSEEECC------CSCSS------CCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeC------CCCCC------CCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHH
Confidence 24577888899999999543 33331 12566655554444 2 3699999999999999999986
Q ss_pred h
Q psy2386 207 Y 207 (311)
Q Consensus 207 ~ 207 (311)
.
T Consensus 219 a 219 (260)
T 1p1x_A 219 I 219 (260)
T ss_dssp H
T ss_pred h
Confidence 4
No 229
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.72 E-value=0.001 Score=64.96 Aligned_cols=130 Identities=18% Similarity=0.254 Sum_probs=89.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~ 132 (311)
|-.++.+.++..+ .++|+|.|-|.... -+.+.+.+.++.+++.. +++|.+---.
T Consensus 277 gv~~d~~eR~~aL-v~AGvD~iviD~ah---------------Ghs~~v~~~i~~ik~~~p~~~viaGNVa--------- 331 (556)
T 4af0_A 277 GTRPGDKDRLKLL-AEAGLDVVVLDSSQ---------------GNSVYQIEFIKWIKQTYPKIDVIAGNVV--------- 331 (556)
T ss_dssp CSSHHHHHHHHHH-HHTTCCEEEECCSC---------------CCSHHHHHHHHHHHHHCTTSEEEEEEEC---------
T ss_pred ccCccHHHHHHHH-HhcCCcEEEEeccc---------------cccHHHHHHHHHHHhhCCcceEEecccc---------
Confidence 6677878777664 46799998886322 12356778888888876 6777663221
Q ss_pred HHHHHHHHHHHcCCCEEEEec------CccccccCCCCcCCCCCcCcHHHHHHH---HHhCCCCeEEEecCCCCHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHA------RNAFLKKLNPKQNRKIPILKYNFVYNL---KKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~------Rt~~~~G~~g~~~~~~~~~~~~~i~~i---~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+.+-++.|.++|+|.|.|-- .|+...|.. -.-...|.++ ++.. .+|||+-|||++.-|+.+
T Consensus 332 -T~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG--------~PQ~tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~K 401 (556)
T 4af0_A 332 -TREQAAQLIAAGADGLRIGMGSGSICITQEVMAVG--------RPQGTAVYAVAEFASRF-GIPCIADGGIGNIGHIAK 401 (556)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSC--------CCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHH
T ss_pred -CHHHHHHHHHcCCCEEeecCCCCcccccccccCCC--------CcHHHHHHHHHHHHHHc-CCCEEecCCcCcchHHHH
Confidence 24678889999999998741 122222321 1223344444 4455 699999999999999999
Q ss_pred HHhh-cCEEEEehhhh
Q psy2386 204 HLNY-IDGVMLGREAY 218 (311)
Q Consensus 204 ~l~~-adgVmigRa~l 218 (311)
.+.. ||.||+|+-+-
T Consensus 402 AlaaGAd~VMlGsllA 417 (556)
T 4af0_A 402 ALALGASAVMMGGLLA 417 (556)
T ss_dssp HHHTTCSEEEESTTTT
T ss_pred HhhcCCCEEEEchhhc
Confidence 9987 99999998653
No 230
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.71 E-value=8.7e-05 Score=73.58 Aligned_cols=92 Identities=14% Similarity=0.129 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCH-----------HHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-----------KEI 201 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~-----------~da 201 (311)
+..++++.+++.|++.|++-.-++...| + ...+.+.+.|+++++.+ ++||+..|||++. +++
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~---~---~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~~~d~~~~~~~~~~~a 353 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDC---P---LKDTPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEVA 353 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CC---C---GGGCHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccc---c---CCCchHHHHHHHHHhhC-CCcEEEeCccccchhcccccchHHHHH
Confidence 5789999999999999988654431111 1 11123688999999988 7999999999998 559
Q ss_pred HHHHhh-cCEEEEehhhhh-------------CCcchHHhHhhh
Q psy2386 202 DLHLNY-IDGVMLGREAYK-------------NPFLMSNFDLNY 231 (311)
Q Consensus 202 ~~~l~~-adgVmigRa~l~-------------~P~i~~~~~~~~ 231 (311)
.++++. ||.|.||++++. +|.+++++.+.+
T Consensus 354 ~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 397 (555)
T 1jvn_A 354 SLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAY 397 (555)
T ss_dssp HHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHh
Confidence 999987 999999999987 479999987653
No 231
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=97.68 E-value=0.00025 Score=67.68 Aligned_cols=142 Identities=13% Similarity=-0.005 Sum_probs=99.3
Q ss_pred HHHHHHHHHcCCCEEEeccCCCccccccCcccCcc-cCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHHHHHH
Q psy2386 61 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL-MTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDF 137 (311)
Q Consensus 61 ~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~L-l~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~ 137 (311)
.+.|+.+.+.||..+-++...+.. .| .|... -.+++...+.+++||+++ ++++.|...-+|+. ++..++
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~~--~K--~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~----~~A~~~ 232 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDFA--SI--TPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGT----HAAARI 232 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHH--TT--CTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCH----HHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCccCcc--cc--ccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCH----HHHHHH
Confidence 344555667899999997221111 01 12211 123566778899999987 47888877767764 357889
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCC-CCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEe
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRK-IPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLG 214 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~-~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmig 214 (311)
++.|++.|+++|-- . .++-|++..+++++.+ ++||.+.+.+.+++++.++++. +|.|++=
T Consensus 233 ~~~L~~~~i~~iEq----------------P~~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 233 CNALADYGVLWVED----------------PIAKMDNIPAVADLRRQT-RAPICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp HHHGGGGTCSEEEC----------------CBSCTTCHHHHHHHHHHH-CCCEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhcCCCEEEC----------------CCCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 99999999998841 1 1234788899999988 7999999999999999999975 9999996
Q ss_pred hhhhhCCcchHHh
Q psy2386 215 REAYKNPFLMSNF 227 (311)
Q Consensus 215 Ra~l~~P~i~~~~ 227 (311)
-+-.+...=..++
T Consensus 296 ~~~~GGit~~~~i 308 (410)
T 3dip_A 296 LTWCGGLSEGRKI 308 (410)
T ss_dssp TTTSSCHHHHHHH
T ss_pred ccccCCHHHHHHH
Confidence 5554444333333
No 232
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.67 E-value=0.0003 Score=61.20 Aligned_cols=149 Identities=12% Similarity=0.085 Sum_probs=99.4
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc-----c------ccCcccCcccCChHHHHHHHH-----
Q psy2386 44 EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----V------QNGFFGAILMTKPLLVSDCIK----- 107 (311)
Q Consensus 44 ~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~-----v------~~~~~G~~Ll~~~~~~~~iv~----- 107 (311)
...|++.=|.+.++++....++.+.+.|++.||+.+-.|..- . .--|.|.-+ +++.+.+.++
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVl--t~~~a~~ai~AGA~f 88 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVC--TADDFQKAIDAGAQF 88 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCC--SHHHHHHHHHHTCSE
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeecccc--CHHHHHHHHHcCCCE
Confidence 357899999999999999999999999999999977654211 0 011233322 5555554444
Q ss_pred ------------HHhccccc------eeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCC
Q psy2386 108 ------------AMRDSVEI------DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKI 169 (311)
Q Consensus 108 ------------~v~~~~~~------pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~ 169 (311)
..++. ++ |+.--+-. ..| +....++|+|.|.+++-.. ..
T Consensus 89 ivsP~~~~evi~~~~~~-~v~~~~~~~~~PG~~T----------ptE-~~~A~~~Gad~vK~FPa~~-~g---------- 145 (217)
T 3lab_A 89 IVSPGLTPELIEKAKQV-KLDGQWQGVFLPGVAT----------ASE-VMIAAQAGITQLKCFPASA-IG---------- 145 (217)
T ss_dssp EEESSCCHHHHHHHHHH-HHHCSCCCEEEEEECS----------HHH-HHHHHHTTCCEEEETTTTT-TT----------
T ss_pred EEeCCCcHHHHHHHHHc-CCCccCCCeEeCCCCC----------HHH-HHHHHHcCCCEEEECcccc-cc----------
Confidence 32221 44 44443221 122 4455788999998765421 11
Q ss_pred CcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 170 PILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 170 ~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
..++++.++.-+|++|++..|||+ ++.+.++++. +..+..| ..+.+|.
T Consensus 146 ---G~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgG-s~l~~~~ 194 (217)
T 3lab_A 146 ---GAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICAGG-SWLTESK 194 (217)
T ss_dssp ---HHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEE-SGGGCHH
T ss_pred ---CHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCCCEEEEEC-hhhcChh
Confidence 258899999988889999999999 8999999986 7766555 3444443
No 233
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=97.67 E-value=0.00039 Score=66.09 Aligned_cols=133 Identities=11% Similarity=0.078 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHc-CCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHH
Q psy2386 57 PKKLAKSAKIIQKW-GYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 57 ~~~~~~aa~~~~~~-g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~ 134 (311)
|+++++.|+...+. ||..|-+..| .+++.-.+.++++|+++ ++++.|...-+|+. ++.
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~----~~A 228 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSV----PDS 228 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCH----HHH
Confidence 68898888877777 9999999865 13455567788888876 56788877777764 356
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVM 212 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVm 212 (311)
.++++.+++.|+.+|- +. . .|++..+++++.. ++||.+...+.+++++.++++. +|.|+
T Consensus 229 ~~~~~~l~~~~i~~iE---------------qP-~--~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 289 (398)
T 4dye_A 229 VRAGIALEELDLEYLE---------------DP-C--VGIEGMAQVKAKV-RIPLCTNMCVVRFEDFAPAMRLNAVDVIH 289 (398)
T ss_dssp HHHHHHHGGGCCSEEE---------------CC-S--SHHHHHHHHHHHC-CSCEEESSSCCSGGGHHHHHHTTCCSEEE
T ss_pred HHHHHHHhhcCCCEEc---------------CC-C--CCHHHHHHHHhhC-CCCEEeCCcCCCHHHHHHHHHhCCCCEEE
Confidence 8899999999999882 11 1 2888899999998 7999999999999999999975 99999
Q ss_pred EehhhhhCCcchHHhH
Q psy2386 213 LGREAYKNPFLMSNFD 228 (311)
Q Consensus 213 igRa~l~~P~i~~~~~ 228 (311)
+--+-.+...=..++.
T Consensus 290 ~k~~~~GGit~~~~ia 305 (398)
T 4dye_A 290 GDVYKWGGIAATKALA 305 (398)
T ss_dssp ECHHHHTSHHHHHHHH
T ss_pred eCccccCCHHHHHHHH
Confidence 9876666654444443
No 234
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.66 E-value=0.00052 Score=60.22 Aligned_cols=141 Identities=13% Similarity=0.167 Sum_probs=97.0
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHH---HHhccccceeEEEE
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIK---AMRDSVEIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~---~v~~~~~~pvsvKi 121 (311)
+.|+.+.|.-+||+.+.+... + +|.|-+|..... +.+.+.++ .+++. +.-+.|-+
T Consensus 64 ~~~~dvhLmv~dp~~~i~~~~---~--Ad~itvH~ea~~----------------~~~~~~i~~~~~i~~~-G~k~gval 121 (227)
T 1tqx_A 64 SIFFDVHLMVEYPEKYVPLLK---T--SNQLTFHFEALN----------------EDTERCIQLAKEIRDN-NLWCGISI 121 (227)
T ss_dssp SCEEEEEEESSCGGGGGGGCT---T--SSEEEEEGGGGT----------------TCHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCcEEEEEEEcCHHHHHHHHH---h--CCEEEEeecCCc----------------cCHHHHHHHHHHHHHc-CCeEEEEe
Confidence 689999999999997754332 2 799988854321 12345566 77764 66666655
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcC-CCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAG-CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE 200 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G-~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d 200 (311)
..+.. .+.++.+.+.| +|+|.+.+-.. |+.|. .. .+..++.++++++..++++|.+-|||. ++.
T Consensus 122 np~tp--------~~~~~~~l~~g~~D~VlvmsV~p---Gf~gq--~f-~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t 186 (227)
T 1tqx_A 122 KPKTD--------VQKLVPILDTNLINTVLVMTVEP---GFGGQ--SF-MHDMMGKVSFLRKKYKNLNIQVDGGLN-IET 186 (227)
T ss_dssp CTTSC--------GGGGHHHHTTTCCSEEEEESSCT---TCSSC--CC-CGGGHHHHHHHHHHCTTCEEEEESSCC-HHH
T ss_pred CCCCc--------HHHHHHHhhcCCcCEEEEeeecc---CCCCc--cc-chHHHHHHHHHHHhccCCeEEEECCCC-HHH
Confidence 43321 34556667776 99996554432 33222 11 234678899999877578999999998 789
Q ss_pred HHHHHhh-cCEEEEehhhhhCCc
Q psy2386 201 IDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 201 a~~~l~~-adgVmigRa~l~~P~ 222 (311)
+.++.+. ||.+.+||++++.+.
T Consensus 187 i~~~~~aGAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 187 TEISASHGANIIVAGTSIFNAED 209 (227)
T ss_dssp HHHHHHHTCCEEEESHHHHTCSS
T ss_pred HHHHHHcCCCEEEEeHHHhCCCC
Confidence 9998876 999999999987655
No 235
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.66 E-value=0.0013 Score=59.59 Aligned_cols=147 Identities=8% Similarity=0.059 Sum_probs=100.4
Q ss_pred CCCCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEE
Q psy2386 44 EEHPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITV 119 (311)
Q Consensus 44 ~~~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsv 119 (311)
.+.|+++=+ +| +|+...+.++.+.++|+++|.|-=+.. +|.+....| . +-+.+...+-|++++++- +.++.|
T Consensus 81 ~~~PviaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~-pKrcgh~~g-k-l~~~~e~~~~I~aa~~a~~~~~~~i 156 (287)
T 3b8i_A 81 ARLPVIADADHGYG-NALNVMRTVVELERAGIAALTIEDTLL-PAQFGRKST-D-LICVEEGVGKIRAALEARVDPALTI 156 (287)
T ss_dssp CSSCEEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEECBCC-SCCTTTCTT-C-BCCHHHHHHHHHHHHHHCCSTTSEE
T ss_pred CCCCEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCC-ccccCCCCC-C-ccCHHHHHHHHHHHHHcCCCCCcEE
Confidence 456887766 36 899999999988899999999986643 443332233 4 566666666677776653 445566
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe-c---CC
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN-G---GI 195 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n-G---gI 195 (311)
--|..- .....++.++-++.++++|+|.|.+++-. +.+.++++.+.+ ++|++.. | ..
T Consensus 157 ~aRtda-a~~gl~~ai~Ra~ay~eAGAd~i~~e~~~-----------------~~~~~~~i~~~~-~~P~ii~~~g~~~~ 217 (287)
T 3b8i_A 157 IARTNA-ELIDVDAVIQRTLAYQEAGADGICLVGVR-----------------DFAHLEAIAEHL-HIPLMLVTYGNPQL 217 (287)
T ss_dssp EEEEET-TTSCHHHHHHHHHHHHHTTCSEEEEECCC-----------------SHHHHHHHHTTC-CSCEEEECTTCGGG
T ss_pred EEechh-hhcCHHHHHHHHHHHHHcCCCEEEecCCC-----------------CHHHHHHHHHhC-CCCEEEeCCCCCCC
Confidence 666543 33335678899999999999999998752 568899999998 6998742 3 34
Q ss_pred CCHHHHHHHHhhcCEEEEeh
Q psy2386 196 KTKKEIDLHLNYIDGVMLGR 215 (311)
Q Consensus 196 ~s~~da~~~l~~adgVmigR 215 (311)
.|.++..++ ++..|..|-
T Consensus 218 ~~~~eL~~l--Gv~~v~~~~ 235 (287)
T 3b8i_A 218 RDDARLARL--GVRVVVNGH 235 (287)
T ss_dssp CCHHHHHHT--TEEEEECCC
T ss_pred CCHHHHHHc--CCcEEEECh
Confidence 555544433 266666553
No 236
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.64 E-value=0.00099 Score=61.23 Aligned_cols=151 Identities=13% Similarity=0.040 Sum_probs=101.0
Q ss_pred CCCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEE
Q psy2386 45 EHPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVK 120 (311)
Q Consensus 45 ~~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvK 120 (311)
+.|+++=+ +| +|+...+.++.+.++|+.+|.|-=+.. ++++. +.|+.-+-..+...+-|++++++. +.++.|-
T Consensus 101 ~~PviaD~d~Gyg-~~~~v~~tv~~l~~aGaagv~iED~~~-~k~cg-H~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ 177 (318)
T 1zlp_A 101 NLCVVVDGDTGGG-GPLNVQRFIRELISAGAKGVFLEDQVW-PKKCG-HMRGKAVVPAEEHALKIAAAREAIGDSDFFLV 177 (318)
T ss_dssp SSEEEEECTTCSS-SHHHHHHHHHHHHHTTCCEEEEECBCS-SCCCS-SSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCEEEeCCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCC-Ccccc-CCCCCccCCHHHHHHHHHHHHHhcccCCcEEE
Confidence 57888776 36 899999999988899999999986643 33332 233333344444444555555543 4556666
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe---c---C
Q psy2386 121 HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---G---G 194 (311)
Q Consensus 121 iR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---G---g 194 (311)
-|..-......++.++-++.++++|+|.|.+++.. +.+.++++.+.+ ++|+.+| | .
T Consensus 178 ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~-----------------~~e~~~~i~~~l-~~P~lan~~~~g~~~ 239 (318)
T 1zlp_A 178 ARTDARAPHGLEEGIRRANLYKEAGADATFVEAPA-----------------NVDELKEVSAKT-KGLRIANMIEGGKTP 239 (318)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCC-----------------SHHHHHHHHHHS-CSEEEEEECTTSSSC
T ss_pred EeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCC-----------------CHHHHHHHHHhc-CCCEEEEeccCCCCC
Confidence 67521111123467888999999999999998753 568899999999 7999766 3 3
Q ss_pred CCCHHHHHHHHhhcCEEEEehhhh
Q psy2386 195 IKTKKEIDLHLNYIDGVMLGREAY 218 (311)
Q Consensus 195 I~s~~da~~~l~~adgVmigRa~l 218 (311)
..|.++..++ .+..|..|-.++
T Consensus 240 ~~~~~eL~~l--Gv~~v~~~~~~~ 261 (318)
T 1zlp_A 240 LHTPEEFKEM--GFHLIAHSLTAV 261 (318)
T ss_dssp CCCHHHHHHH--TCCEEEECSHHH
T ss_pred CCCHHHHHHc--CCeEEEEchHHH
Confidence 4554444333 388898886665
No 237
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.63 E-value=0.00019 Score=63.64 Aligned_cols=82 Identities=12% Similarity=0.045 Sum_probs=59.7
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
+....+.|+|+|.+.+..... + ++. . ++..++.++++++.. .++||++-||| +++++.++++. +|||.+|+
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~---t-K~~-~-~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTP---T-KPG-R-AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCC---C--------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred HHHHhhCCCCEEEEcCccCCC---C-CCC-c-chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 556677999999986543210 0 111 1 346899999998763 27999999999 89999999987 99999999
Q ss_pred hhhhCCcchHH
Q psy2386 216 EAYKNPFLMSN 226 (311)
Q Consensus 216 a~l~~P~i~~~ 226 (311)
+++..+.....
T Consensus 221 ai~~a~dp~~a 231 (243)
T 3o63_A 221 AITSADDPRAA 231 (243)
T ss_dssp HHHTCSSHHHH
T ss_pred HHhCCCCHHHH
Confidence 99876664433
No 238
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.63 E-value=5.3e-05 Score=67.96 Aligned_cols=80 Identities=8% Similarity=-0.022 Sum_probs=69.3
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..++++.+.+.|++.+++-.-++ .+.+.|+++++.+ .+||...|||++. ++.+++ . ||-|.
T Consensus 40 p~~~A~~~~~~Ga~~l~vvDL~~---------------~n~~~i~~i~~~~-~~pv~vgGGir~~-~~~~~l-~Ga~~Vi 101 (260)
T 2agk_A 40 SSYYAKLYKDRDVQGCHVIKLGP---------------NNDDAAREALQES-PQFLQVGGGINDT-NCLEWL-KWASKVI 101 (260)
T ss_dssp HHHHHHHHHHTTCTTCEEEEESS---------------SCHHHHHHHHHHS-TTTSEEESSCCTT-THHHHT-TTCSCEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCC---------------CCHHHHHHHHhcC-CceEEEeCCCCHH-HHHHHh-cCCCEEE
Confidence 57899999999999998743221 2678899999998 6999999999987 999999 7 99999
Q ss_pred EehhhhhC-----CcchHHhHhhh
Q psy2386 213 LGREAYKN-----PFLMSNFDLNY 231 (311)
Q Consensus 213 igRa~l~~-----P~i~~~~~~~~ 231 (311)
+|++++.| |.++.++.+.+
T Consensus 102 igs~a~~~~g~~~p~~~~~~~~~~ 125 (260)
T 2agk_A 102 VTSWLFTKEGHFQLKRLERLTELC 125 (260)
T ss_dssp ECGGGBCTTCCBCHHHHHHHHHHH
T ss_pred ECcHHHhhcCCCCHHHHHHHHHHh
Confidence 99999999 99999887654
No 239
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.60 E-value=0.0022 Score=57.78 Aligned_cols=145 Identities=11% Similarity=0.071 Sum_probs=101.3
Q ss_pred CCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEE
Q psy2386 46 HPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITV 119 (311)
Q Consensus 46 ~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsv 119 (311)
.|+++=+ +|.+|+...+.++.+.++|+.+|.|-=+... .|.. +-+.+...+-|++++++. ++|+.|
T Consensus 77 ~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~-------~~k~-l~~~~e~~~~I~aa~~a~~~~g~~~~i 148 (275)
T 2ze3_A 77 IPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGL-------TPTE-LYDLDSQLRRIEAARAAIDASGVPVFL 148 (275)
T ss_dssp SCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSS-------SSSC-BCCHHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCC-------CCCc-cCCHHHHHHHHHHHHHhHhhcCCCeEE
Confidence 6887766 3568999999999888999999999765431 1223 446666666677776653 688888
Q ss_pred EEeccCCCC-------CcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe
Q psy2386 120 KHRIGIDDI-------NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 192 (311)
Q Consensus 120 KiR~g~~~~-------~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n 192 (311)
--|..-.-. +..++.++-++.++++|+|.|.+++.. +.+.++++.+.+ ++|+-.+
T Consensus 149 ~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~-----------------~~~~~~~i~~~~-~~P~n~~ 210 (275)
T 2ze3_A 149 NARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLAL-----------------QSQDIRALADAL-RVPLNVM 210 (275)
T ss_dssp EEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCC-----------------CHHHHHHHHHHC-SSCEEEE
T ss_pred EEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCCC-----------------CHHHHHHHHHhc-CCCEEEe
Confidence 888632110 135678888999999999999998753 568899999998 6998766
Q ss_pred c--CCCCHHHHHHHHhhcCEEEEehhhh
Q psy2386 193 G--GIKTKKEIDLHLNYIDGVMLGREAY 218 (311)
Q Consensus 193 G--gI~s~~da~~~l~~adgVmigRa~l 218 (311)
+ +..|.++..++ ++..|..|-.++
T Consensus 211 ~~~~~~~~~eL~~l--Gv~~v~~~~~~~ 236 (275)
T 2ze3_A 211 AFPGSPVPRALLDA--GAARVSFGQSLM 236 (275)
T ss_dssp CCTTSCCHHHHHHT--TCSEEECTTHHH
T ss_pred cCCCCCCHHHHHHc--CCcEEEEChHHH
Confidence 4 44554333222 277777775543
No 240
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.59 E-value=0.0017 Score=56.57 Aligned_cols=134 Identities=13% Similarity=0.132 Sum_probs=80.6
Q ss_pred HHHHHcCCCEEEeccCC-CccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHH
Q psy2386 65 KIIQKWGYDEINLNCGC-PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSS 143 (311)
Q Consensus 65 ~~~~~~g~d~IdiN~gC-P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~ 143 (311)
..+.++|+|+|-|...- .. .++.+.+.++..++. ++.+.+=+.. . .+ .+.+.+
T Consensus 76 ~~~~~~Gad~Vll~~ser~l--------------~~~e~~~~~~~a~~~-Gl~~iv~v~~--~--------~e-~~~~~~ 129 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRM--------------LLADIEAVINKCKNL-GLETIVCTNN--I--------NT-SKAVAA 129 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCC--------------BHHHHHHHHHHHHHH-TCEEEEEESS--S--------HH-HHHHTT
T ss_pred HHHHHcCCCEEEECCccccC--------------CHHHHHHHHHHHHHC-CCeEEEEeCC--c--------hH-HHHHHh
Confidence 56678899999994220 01 123356777766654 6555554331 1 11 345566
Q ss_pred cCCCEEEEecCccccccCCCCc-CCCCCcCcHH-HHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhC
Q psy2386 144 AGCRTFIVHARNAFLKKLNPKQ-NRKIPILKYN-FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKN 220 (311)
Q Consensus 144 ~G~~~itvh~Rt~~~~G~~g~~-~~~~~~~~~~-~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~ 220 (311)
.|.+.|.+++|.. -| +|.. ....+ .+.+ ....+++...++||++-|||++++++..+.+. +|||.||++++.-
T Consensus 130 ~~~~~i~~~~~~~--iG-tG~~~~t~~~-~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 130 LSPDCIAVEPPEL--IG-TGIPVSKANP-EVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp TCCSEEEECCCC------------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred CCCCEEEEEeccc--cc-cCCCCccCCH-HHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 7899999998863 23 3310 00111 1133 33344443326999999999999999998877 9999999999987
Q ss_pred CcchHHhH
Q psy2386 221 PFLMSNFD 228 (311)
Q Consensus 221 P~i~~~~~ 228 (311)
+.....++
T Consensus 206 ~d~~~~~~ 213 (219)
T 2h6r_A 206 KNVEEAIR 213 (219)
T ss_dssp SSHHHHHH
T ss_pred ccHHHHHH
Confidence 76544443
No 241
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=97.59 E-value=0.0011 Score=62.24 Aligned_cols=140 Identities=12% Similarity=0.079 Sum_probs=103.6
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc---ceeEEEE
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE---IDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~---~pvsvKi 121 (311)
..|+-..+++.+|+.+.+.++.+.+.||..+-+..|. .+++.-.+.++++++.++ +.+.+..
T Consensus 151 ~vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDa 215 (377)
T 2pge_A 151 RIPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDA 215 (377)
T ss_dssp CEEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEEC
T ss_pred eEEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3455566777899999888888878899999987653 246666778888888764 5666766
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHH-
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKE- 200 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~d- 200 (311)
.-+|+.. +..++++.+++.++.+|- + ..++.||+..+++++.. .+||.+.-.+.|..+
T Consensus 216 N~~~~~~----~a~~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 274 (377)
T 2pge_A 216 NGAFSPA----NAPQRLKRLSQFHLHSIE--------Q--------PIRQHQWSEMAALCANS-PLAIALDEELIGLGAE 274 (377)
T ss_dssp TTBBCTT----THHHHHHHHHTTCCSEEE--------C--------CBCSSCHHHHHHHHHHC-SSCEEESGGGTTCCTH
T ss_pred CCCCCHH----HHHHHHHHHhcCCCcEEE--------c--------cCCcccHHHHHHHHhhC-CCcEEECCccCCcchH
Confidence 6677654 357899999999888771 1 11235899999999988 799999999998888
Q ss_pred -HHHHHhh--cCEEEEehhhhhC
Q psy2386 201 -IDLHLNY--IDGVMLGREAYKN 220 (311)
Q Consensus 201 -a~~~l~~--adgVmigRa~l~~ 220 (311)
+.++++. +|.|++==.-.+.
T Consensus 275 ~~~~~i~~~a~d~i~ik~~~~GG 297 (377)
T 2pge_A 275 QRSAMLDAIRPQYIILKPSLLGG 297 (377)
T ss_dssp HHHHHHHHHCCSEEEECHHHHTS
T ss_pred HHHHHHHhCCCCEEEECchhcCC
Confidence 6688864 9999885444333
No 242
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.58 E-value=0.00032 Score=61.54 Aligned_cols=150 Identities=11% Similarity=0.092 Sum_probs=93.6
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccc-----c------ccCcccCcccCChHHHHHHHHHHhc--
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNR-----V------QNGFFGAILMTKPLLVSDCIKAMRD-- 111 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~-----v------~~~~~G~~Ll~~~~~~~~iv~~v~~-- 111 (311)
+.|++.=+-+.+++++.+.++.+.+.|++.|++-+--|... . ..-++|. ++ +.+.+...+++=.+
T Consensus 25 ~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt-vl-~~d~~~~A~~aGAd~v 102 (225)
T 1mxs_A 25 KARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT-VL-DRSMFAAVEAAGAQFV 102 (225)
T ss_dssp HHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC-CC-SHHHHHHHHHHTCSSE
T ss_pred HCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe-Ee-eHHHHHHHHHCCCCEE
Confidence 35778878888999888888888889999999975433211 0 0113343 22 33443333322111
Q ss_pred --------------cccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 112 --------------SVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 112 --------------~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
..++|+.. |.. + ..| +..+.+.|+|+|.+|+-.. . .-.+++
T Consensus 103 ~~p~~d~~v~~~~~~~g~~~i~----G~~---t---~~e-~~~A~~~Gad~vk~FPa~~-~-------------~G~~~l 157 (225)
T 1mxs_A 103 VTPGITEDILEAGVDSEIPLLP----GIS---T---PSE-IMMGYALGYRRFKLFPAEI-S-------------GGVAAI 157 (225)
T ss_dssp ECSSCCHHHHHHHHHCSSCEEC----EEC---S---HHH-HHHHHTTTCCEEEETTHHH-H-------------THHHHH
T ss_pred EeCCCCHHHHHHHHHhCCCEEE----eeC---C---HHH-HHHHHHCCCCEEEEccCcc-c-------------cCHHHH
Confidence 11222221 211 1 122 3455678888888865210 0 025788
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHh-h-cCEEEEehhhhhCCcc
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLN-Y-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~-~-adgVmigRa~l~~P~i 223 (311)
++++..+|++|+++.||| +++.+.++++ . +++|. |++++..+++
T Consensus 158 k~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 158 KAFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp HHHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred HHHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 999988878999999999 5789999998 5 99999 9988765443
No 243
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.56 E-value=0.0005 Score=66.92 Aligned_cols=125 Identities=23% Similarity=0.269 Sum_probs=80.1
Q ss_pred HHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHH
Q psy2386 61 AKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGT 140 (311)
Q Consensus 61 ~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~ 140 (311)
.+.+..+.+.|+|.+-+.- .|+. ...+.+.++.+++..++||.+|-= + . .+-++.
T Consensus 230 ~~~a~~l~~~gvd~lvvdt-----------a~G~----~~~~L~~I~~l~~~~~vpvi~k~v-~--~-------~~~a~~ 284 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDT-----------AHAH----NLKAIKSMKEMRQKVDADFIVGNI-A--N-------PKAVDD 284 (486)
T ss_dssp HHHHHHHHHTTCSEEEEEC-----------SCCC----CHHHHHHHHHHHHTCCSEEEEEEE-C--C-------HHHHTT
T ss_pred HHHHHHHHHhcCCceEEEe-----------cCCc----EeehhhHHHHHHHHhCCccccCCc-C--C-------HHHHHH
Confidence 3456677788988875541 1111 123345567777777899988732 2 1 233444
Q ss_pred HHHcCCCEEEEecCcc--c-----cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 141 VSSAGCRTFIVHARNA--F-----LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 141 l~~~G~~~itvh~Rt~--~-----~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
+. |++.|.+ |.-. + ..|...+ + ......+.++++.+ ++|||+.|||.+..|+.+++.. ||+||
T Consensus 285 l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~-~----~~~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~v~ 355 (486)
T 2cu0_A 285 LT--FADAVKV-GIGPGSICTTRIVAGVGVP-Q----ITAVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADAVM 355 (486)
T ss_dssp CT--TSSEEEE-CSSCSTTBCHHHHTCCCCC-H----HHHHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred hh--CCCeEEE-eeeeccceeeeEEeecCcc-h----HHHHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCcee
Confidence 55 9999998 3211 0 1111100 0 01234556666666 7999999999999999999986 99999
Q ss_pred Eehhhhh
Q psy2386 213 LGREAYK 219 (311)
Q Consensus 213 igRa~l~ 219 (311)
+|+.++.
T Consensus 356 ~g~~~~~ 362 (486)
T 2cu0_A 356 LGNLLAG 362 (486)
T ss_dssp ESTTTTT
T ss_pred eChhhhc
Confidence 9999875
No 244
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=97.50 E-value=0.00062 Score=64.44 Aligned_cols=136 Identities=11% Similarity=0.170 Sum_probs=96.6
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 46 HPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 46 ~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
.|+-..++ +.+++++.+.++.+.+.||+.+-+..| | -.+ .+.++++|+++ ++.+.|...-
T Consensus 150 v~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~~~~~l~vDaN~ 211 (393)
T 1wuf_A 150 IKVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P-------------NKD----IQFVEAVRKSFPKLSLMADANS 211 (393)
T ss_dssp EEBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T-------------TBS----HHHHHHHHTTCTTSEEEEECTT
T ss_pred ceeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h-------------HHH----HHHHHHHHHHcCCCEEEEECCC
Confidence 34444554 346999988888777789999999754 1 122 34567777776 4455555555
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDL 203 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~ 203 (311)
+|+.. +. ++++.+++.++.+|- + ..++-|++..+++++.. ++||.+.-.+.+.+++.+
T Consensus 212 ~~~~~----~a-~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~ 269 (393)
T 1wuf_A 212 AYNRE----DF-LLLKELDQYDLEMIE--------Q--------PFGTKDFVDHAWLQKQL-KTRICLDENIRSVKDVEQ 269 (393)
T ss_dssp CCCGG----GH-HHHHTTGGGTCSEEE--------C--------CSCSSCSHHHHHHHTTC-SSEEEECTTCCSHHHHHH
T ss_pred CCCHH----HH-HHHHHHHhCCCeEEE--------C--------CCCCcCHHHHHHHHHhC-CCCEEECCCcCCHHHHHH
Confidence 66542 45 788999999988883 1 11235788899999887 799999999999999999
Q ss_pred HHhh--cCEEEEehhhhhCC
Q psy2386 204 HLNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 204 ~l~~--adgVmigRa~l~~P 221 (311)
+++. +|.|++==.-.+..
T Consensus 270 ~i~~~a~d~v~ik~~~~GGi 289 (393)
T 1wuf_A 270 AHSIGSCRAINLKLARVGGM 289 (393)
T ss_dssp HHHHTCCSEEEECTGGGTSH
T ss_pred HHHhCCCCEEEeChhhhCCH
Confidence 9975 89999854443333
No 245
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.48 E-value=0.0033 Score=57.24 Aligned_cols=152 Identities=13% Similarity=0.119 Sum_probs=96.2
Q ss_pred CCCCeEEEec---CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCccc--CcccCChHHHHHHHHHHhcc-cccee
Q psy2386 44 EEHPIAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFG--AILMTKPLLVSDCIKAMRDS-VEIDI 117 (311)
Q Consensus 44 ~~~p~~~Ql~---g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G--~~Ll~~~~~~~~iv~~v~~~-~~~pv 117 (311)
.+.|+++=+= | ++....+.++.+.++|+.+|.|-=+.. +|++. +.| +.-+-..+...+-|++++++ .+.++
T Consensus 78 ~~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iED~~~-~k~cg-H~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~ 154 (295)
T 1s2w_A 78 SDVPILLDADTGYG-NFNNARRLVRKLEDRGVAGACLEDKLF-PKTNS-LHDGRAQPLADIEEFALKIKACKDSQTDPDF 154 (295)
T ss_dssp CSSCEEEECCSSCS-SHHHHHHHHHHHHHTTCCEEEEECBCC----------CTTCCBCCHHHHHHHHHHHHHHCSSTTC
T ss_pred CCCCEEecCCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCC-Ccccc-ccCCCCCcccCHHHHHHHHHHHHHhcccCCc
Confidence 3578887763 5 577888888888899999999986643 33332 223 12233444444444455444 34556
Q ss_pred EEEEeccCC-CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC--CeEEEecC
Q psy2386 118 TVKHRIGID-DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE--LEIIINGG 194 (311)
Q Consensus 118 svKiR~g~~-~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~--ipvi~nGg 194 (311)
.|--|..-. .....++.++-++.++++|+|.|.+++.. .+.+.++++.+.+ + +|+++|-+
T Consensus 155 ~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----------------~~~~~~~~i~~~~-~~~~P~i~~~~ 217 (295)
T 1s2w_A 155 CIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK----------------ADPSDIEAFMKAW-NNQGPVVIVPT 217 (295)
T ss_dssp EEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS----------------SSSHHHHHHHHHH-TTCSCEEECCS
T ss_pred EEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC----------------CCHHHHHHHHHHc-CCCCCEEEeCC
Confidence 666675322 12234578899999999999999998642 1457788888887 5 99999843
Q ss_pred ---CCCHHHHHHHHhh-cCEEEEehhhh
Q psy2386 195 ---IKTKKEIDLHLNY-IDGVMLGREAY 218 (311)
Q Consensus 195 ---I~s~~da~~~l~~-adgVmigRa~l 218 (311)
-.+ ..++-+. +..|.+|-.++
T Consensus 218 ~~~~~~---~~eL~~lGv~~v~~~~~~~ 242 (295)
T 1s2w_A 218 KYYKTP---TDHFRDMGVSMVIWANHNL 242 (295)
T ss_dssp TTTTSC---HHHHHHHTCCEEEECSHHH
T ss_pred CCCCCC---HHHHHHcCCcEEEEChHHH
Confidence 344 3344333 88899886654
No 246
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.48 E-value=0.0013 Score=60.24 Aligned_cols=152 Identities=11% Similarity=0.065 Sum_probs=96.3
Q ss_pred CCCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc---ccceeE
Q psy2386 45 EHPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS---VEIDIT 118 (311)
Q Consensus 45 ~~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~---~~~pvs 118 (311)
..|+++=+ +| +|+...+.++.+.++|+.+|.|-=... +|.+..-.|-.| -..+...+-+++.+++ .+.++.
T Consensus 88 ~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~-~k~cgh~~gk~l-~~~~e~~~rI~Aa~~A~~~~~~d~~ 164 (307)
T 3lye_A 88 GPPLIADMDTGYG-GPIMVARTVEHYIRSGVAGAHLEDQIL-TKRCGHLSGKKV-VSRDEYLVRIRAAVATKRRLRSDFV 164 (307)
T ss_dssp SCCEEEECTTCSS-SHHHHHHHHHHHHHTTCCEEEECCBCC-CC--------CB-CCHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred CCcEEEECCCCCC-CHHHHHHHHHHHHHcCCeEEEEcCCCC-CcccCCCCCCee-cCHHHHHHHHHHHHHHHHhcCCCeE
Confidence 57888766 34 588899999999999999999975542 232221123334 3444433334444433 256777
Q ss_pred EEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe---cC-
Q psy2386 119 VKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG- 194 (311)
Q Consensus 119 vKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---Gg- 194 (311)
|--|..-......++.++-++.+.++|+|.|-+++.+ +.+.++++.+.++.+||.+| ||
T Consensus 165 I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~-----------------~~~~~~~i~~~~~~~Pv~~n~~~~g~ 227 (307)
T 3lye_A 165 LIARTDALQSLGYEECIERLRAARDEGADVGLLEGFR-----------------SKEQAAAAVAALAPWPLLLNSVENGH 227 (307)
T ss_dssp EEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCS-----------------CHHHHHHHHHHHTTSCBEEEEETTSS
T ss_pred EEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCCC-----------------CHHHHHHHHHHccCCceeEEeecCCC
Confidence 7778632111234567888999999999999998764 45778899888744888776 33
Q ss_pred --CCCHHHHHHHHhhcCEEEEehhhh
Q psy2386 195 --IKTKKEIDLHLNYIDGVMLGREAY 218 (311)
Q Consensus 195 --I~s~~da~~~l~~adgVmigRa~l 218 (311)
..|.++..++ .+..|+.+-.++
T Consensus 228 ~p~~t~~eL~~l--Gv~~v~~~~~~~ 251 (307)
T 3lye_A 228 SPLITVEEAKAM--GFRIMIFSFATL 251 (307)
T ss_dssp SCCCCHHHHHHH--TCSEEEEETTTH
T ss_pred CCCCCHHHHHHc--CCeEEEEChHHH
Confidence 3455444443 388887776554
No 247
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.46 E-value=0.00093 Score=58.99 Aligned_cols=147 Identities=14% Similarity=0.149 Sum_probs=97.2
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEE--EeccCC--CccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEI--NLNCGC--PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~I--diN~gC--P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
+.++|...|...+.++.+.+.+.|+|.+ |+==|. | +. .+| ..+++++++.++. .|++=+
T Consensus 16 i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvp--n~---t~G----------~~~v~~lr~~~~~--DvhLMv 78 (237)
T 3cu2_A 16 LSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSS--LF---TVG----------AIGIKYFPTHCFK--DVHLMV 78 (237)
T ss_dssp EEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS--CB---CBC----------THHHHTSCTTSEE--EEEEEC
T ss_pred EEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCcccc--ch---hhh----------HHHHHHHhhhCCC--CeEEEE
Confidence 7899999999999999999999999974 552232 3 11 122 2567778877643 555443
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcc--------c--cc---------c------CCCC---cC---------
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNA--------F--LK---------K------LNPK---QN--------- 166 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~--------~--~~---------G------~~g~---~~--------- 166 (311)
++ ...+++.+.++|+|.+|+|.-.. . .. | ++|. +.
T Consensus 79 --~~------p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D 150 (237)
T 3cu2_A 79 --RN------QLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQID 150 (237)
T ss_dssp --SC------HHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCS
T ss_pred --EC------HHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCc
Confidence 22 24678888999999999984211 0 01 1 0110 00
Q ss_pred -------------CCCCcCcHHHHHHHHHhCC----CCeEEEecCCCCHHHHHHHHh--h-cCEEEEehhhhhC
Q psy2386 167 -------------RKIPILKYNFVYNLKKDFP----ELEIIINGGIKTKKEIDLHLN--Y-IDGVMLGREAYKN 220 (311)
Q Consensus 167 -------------~~~~~~~~~~i~~i~~~~~----~ipvi~nGgI~s~~da~~~l~--~-adgVmigRa~l~~ 220 (311)
....+...+.++++++... ++||.+-|||+ .+.+.++.+ . ||++.+|++++..
T Consensus 151 ~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 151 VIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred eeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 0001112456677776542 48999999998 789999998 6 9999999999874
No 248
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.46 E-value=0.0022 Score=56.12 Aligned_cols=132 Identities=11% Similarity=0.010 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE--EeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK--HRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK--iR~g~~~~~~~~~ 133 (311)
+.+.-..-++. .+.|+|.||+-+ .+|..+-.+.+.+.+=+.++++.++- ..+| +-.+.-. .++
T Consensus 65 ~~~~k~~E~~~-i~~GAdEID~Vi----------nig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt---~ee 129 (226)
T 1vcv_A 65 PTASRIALVSR-LAEVADEIDVVA----------PIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLR---DEE 129 (226)
T ss_dssp CHHHHHHHHHH-HTTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCC---HHH
T ss_pred chHHHHHHHHH-HHCCCCEEEEec----------chhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCC---HHH
Confidence 33433334445 678999999852 14444446778888888888887742 2455 3333222 235
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCC----CcCCCCCcCcHHHHHHHHHh---C-CCCeEEEecCCCCHHHHHHHH
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNP----KQNRKIPILKYNFVYNLKKD---F-PELEIIINGGIKTKKEIDLHL 205 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g----~~~~~~~~~~~~~i~~i~~~---~-~~ipvi~nGgI~s~~da~~~l 205 (311)
....++...++|+|+|--. .||++ .+....+.+..+.++-+++. + ++++|-+.|||+|.+|+.+++
T Consensus 130 i~~a~~ia~eaGADfVKTS------TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i 203 (226)
T 1vcv_A 130 RYTLYDIIAEAGAHFIKSS------TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIV 203 (226)
T ss_dssp HHHHHHHHHHHTCSEEECC------CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeC------CCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence 6778888899999999543 23220 00000122444444444433 4 359999999999999999999
Q ss_pred hhc
Q psy2386 206 NYI 208 (311)
Q Consensus 206 ~~a 208 (311)
+.+
T Consensus 204 ~a~ 206 (226)
T 1vcv_A 204 DAI 206 (226)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 249
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.43 E-value=0.00072 Score=75.61 Aligned_cols=159 Identities=13% Similarity=0.099 Sum_probs=99.8
Q ss_pred CCCCCeEEEecCCCHHHH---HHHHHHHHHcCCCE--EEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccccee
Q psy2386 43 AEEHPIAFQVGDNEPKKL---AKSAKIIQKWGYDE--INLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDI 117 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~---~~aa~~~~~~g~d~--IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pv 117 (311)
+.+.|+.+.+.=.+|..+ .+..+.+.+.|+.. |.+..|-|.. +.+.++++.+ ++++
T Consensus 642 ~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~---------------~~~~~~i~~l----G~~v 702 (2051)
T 2uv8_G 642 EKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSL---------------EVASEYIETL----GLKY 702 (2051)
T ss_dssp CTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCH---------------HHHHHHHHHS----CCSC
T ss_pred CCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecCCCCch---------------hhHHHHHHHc----CCEE
Confidence 446788888776555321 24555666777665 7777666642 3344444443 6665
Q ss_pred EEEEeccCCCCCcHHHHHHHHHHHHHcCCCEE---EEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 118 TVKHRIGIDDINSYDFVRDFVGTVSSAGCRTF---IVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 118 svKiR~g~~~~~~~~~~~e~~~~l~~~G~~~i---tvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
....- + .. ..+..+...+++|+|++ .+.|.. -+|..|.+.. ...-+..+.++++.+ +||||+.||
T Consensus 703 i~~~~-~-----~~-~a~~~~~~~~~~g~d~~ii~~~~G~e--aGGH~g~~d~--~~~~l~l~~~v~~~~-~ipviaaGG 770 (2051)
T 2uv8_G 703 LGLKP-G-----SI-DAISQVINIAKAHPNFPIALQWTGGR--GGGHHSFEDA--HTPMLQMYSKIRRHP-NIMLIFGSG 770 (2051)
T ss_dssp EEECC-C-----SH-HHHHHHHHHHHHSTTSCEEEEECCSS--CSEECCSCCS--SHHHHHHHHHHTTCT-TBCCEEESS
T ss_pred EEecC-c-----hH-HHHHHHHHHHHhCCCceeEEEEEccC--cCCCCCcccc--cccHHHHHHHHHhcC-CceEEEeCC
Confidence 43221 1 11 34566788889999994 444554 2444332111 112245678899887 899999999
Q ss_pred CCCHHHHHHHH-----------hh-cCEEEEehhhhhCCc--chHHhHhhhc
Q psy2386 195 IKTKKEIDLHL-----------NY-IDGVMLGREAYKNPF--LMSNFDLNYY 232 (311)
Q Consensus 195 I~s~~da~~~l-----------~~-adgVmigRa~l~~P~--i~~~~~~~~~ 232 (311)
|.+.+++..+| .. ||||++|+.++.-.. .-..+++.+.
T Consensus 771 i~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~K~~iv 822 (2051)
T 2uv8_G 771 FGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDAKKCIA 822 (2051)
T ss_dssp CCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHHHHHHH
T ss_pred CCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCHHHHHHHH
Confidence 99999999999 34 999999999876543 3334454443
No 250
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.43 E-value=0.0059 Score=52.41 Aligned_cols=134 Identities=13% Similarity=0.125 Sum_probs=83.3
Q ss_pred CCeEEEec--CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 46 HPIAFQVG--DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 46 ~p~~~Ql~--g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
.++=+-++ +++|+.+ ++.+.++|+|.|-+|.... ++ +++.+++.. -|++...+
T Consensus 54 v~~D~kl~DI~~t~~~~---v~~~~~~Gad~vtvh~~~g----------------~~----~i~~~~~~~--gv~vl~~t 108 (208)
T 2czd_A 54 IIADLKLADIPNTNRLI---ARKVFGAGADYVIVHTFVG----------------RD----SVMAVKELG--EIIMVVEM 108 (208)
T ss_dssp EEEEEEECSCHHHHHHH---HHHHHHTTCSEEEEESTTC----------------HH----HHHHHHTTS--EEEEECCC
T ss_pred EEEEeeeCchHHHHHHH---HHHHHhcCCCEEEEeccCC----------------HH----HHHHHHHhC--CcEEEEec
Confidence 34456666 6666554 4555689999999995432 11 245555543 34444333
Q ss_pred cCCCCCc--HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCH-HH
Q psy2386 124 GIDDINS--YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-KE 200 (311)
Q Consensus 124 g~~~~~~--~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~-~d 200 (311)
....-.+ .+....++....+.|++.+.+.+.. .+.++++++..+.-+++..|||+.. .+
T Consensus 109 ~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~------------------~~~i~~lr~~~~~~~~iv~gGI~~~g~~ 170 (208)
T 2czd_A 109 SHPGALEFINPLTDRFIEVANEIEPFGVIAPGTR------------------PERIGYIRDRLKEGIKILAPGIGAQGGK 170 (208)
T ss_dssp CSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSS------------------THHHHHHHHHSCTTCEEEECCCCSSTTH
T ss_pred CCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCC------------------hHHHHHHHHhCCCCeEEEECCCCCCCCC
Confidence 2111000 1234566777889999998665332 2456777777643467799999863 36
Q ss_pred HHHHHhh-cCEEEEehhhhhCCc
Q psy2386 201 IDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 201 a~~~l~~-adgVmigRa~l~~P~ 222 (311)
+.++++. +|++.+||+++..+.
T Consensus 171 ~~~~~~aGad~vvvGr~I~~a~d 193 (208)
T 2czd_A 171 AKDAVKAGADYIIVGRAIYNAPN 193 (208)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHHcCCCEEEEChHHhcCCC
Confidence 7777766 999999999987654
No 251
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.41 E-value=0.00094 Score=57.63 Aligned_cols=77 Identities=10% Similarity=0.063 Sum_probs=54.7
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
+..++ .|+|+|.+.+-... .+ ++. +.++.+|+.++++++.+ +++||++-|||. ++++.++++. ++||.+++
T Consensus 101 ~~~A~-~GaDyv~~g~vf~t-~s---k~~-~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 101 VKNRK-HFYDYVFMSPIYDS-IS---KVN-YYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp HHTTG-GGSSEEEECCCC--------------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESH
T ss_pred HHHHh-hCCCEEEECCcCCC-CC---CCC-CCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhH
Confidence 34445 89999987543210 00 011 12346899999998873 379999999998 8999999976 99999999
Q ss_pred hhhhCC
Q psy2386 216 EAYKNP 221 (311)
Q Consensus 216 a~l~~P 221 (311)
+++..+
T Consensus 174 ~i~~~~ 179 (210)
T 3ceu_A 174 DLWNKF 179 (210)
T ss_dssp HHHTTC
T ss_pred HhHcCC
Confidence 997643
No 252
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.41 E-value=0.00071 Score=58.70 Aligned_cols=133 Identities=18% Similarity=0.225 Sum_probs=82.1
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDIN 129 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~ 129 (311)
+-+. ..|+.+. +.+.++|+|+|-++...+ .+.+.++++.+++. ++++.+.+ ++..
T Consensus 66 ~~l~-d~p~~~~---~~~~~aGad~i~vh~~~~----------------~~~~~~~~~~~~~~-g~~~~~d~-l~~~--- 120 (218)
T 3jr2_A 66 MKTT-DGGAILS---RMAFEAGADWITVSAAAH----------------IATIAACKKVADEL-NGEIQIEI-YGNW--- 120 (218)
T ss_dssp EEEC-SCHHHHH---HHHHHHTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEEC-CSSC---
T ss_pred Eeec-ccHHHHH---HHHHhcCCCEEEEecCCC----------------HHHHHHHHHHHHHh-CCccceee-eecC---
Confidence 4555 4576654 556688999999984322 23456777777764 55443322 2321
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEe-cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-
Q psy2386 130 SYDFVRDFVGTVSSAGCRTFIVH-ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 207 (311)
Q Consensus 130 ~~~~~~e~~~~l~~~G~~~itvh-~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~- 207 (311)
+ . +-+..+.+.|+|++.++ +.+....|.. -.+..++.+++++. . ++|+++.||| +++.+.++++.
T Consensus 121 T---~-~~~~~~~~~g~d~v~~~~~~~~~~~g~~------~~~~~l~~i~~~~~-~-~~pi~v~GGI-~~~~~~~~~~aG 187 (218)
T 3jr2_A 121 T---M-QDAKAWVDLGITQAIYHRSRDAELAGIG------WTTDDLDKMRQLSA-L-GIELSITGGI-VPEDIYLFEGIK 187 (218)
T ss_dssp C---H-HHHHHHHHTTCCEEEEECCHHHHHHTCC------SCHHHHHHHHHHHH-T-TCEEEEESSC-CGGGGGGGTTSC
T ss_pred C---H-HHHHHHHHcCccceeeeeccccccCCCc------CCHHHHHHHHHHhC-C-CCCEEEECCC-CHHHHHHHHHcC
Confidence 1 1 23445566799998764 3222112210 01123455655554 3 7999999999 58999988876
Q ss_pred cCEEEEehhhhhC
Q psy2386 208 IDGVMLGREAYKN 220 (311)
Q Consensus 208 adgVmigRa~l~~ 220 (311)
||+|.+||+++..
T Consensus 188 Ad~vvvGsaI~~a 200 (218)
T 3jr2_A 188 TKTFIAGRALAGA 200 (218)
T ss_dssp EEEEEESGGGSHH
T ss_pred CCEEEEchhhcCC
Confidence 9999999998753
No 253
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=97.34 E-value=0.0028 Score=57.82 Aligned_cols=152 Identities=14% Similarity=0.157 Sum_probs=97.5
Q ss_pred CCCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc---ccceeE
Q psy2386 45 EHPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS---VEIDIT 118 (311)
Q Consensus 45 ~~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~---~~~pvs 118 (311)
+.|+++=+ +| +|+...+.++.+.++|+.+|.|-=... +|.+....|-.|....+.+.+|- +.+++ .+.++.
T Consensus 80 ~~PviaD~d~Gyg-~~~~v~~tv~~l~~aGaagv~iEDq~~-~Krcgh~~gk~l~~~~e~~~rI~-Aa~~A~~~~~~d~~ 156 (302)
T 3fa4_A 80 STPVIADADTGYG-GPIMVARTTEQYSRSGVAAFHIEDQVQ-TKRCGHLAGKILVDTDTYVTRIR-AAVQARQRIGSDIV 156 (302)
T ss_dssp TSCEEEECTTTTS-SHHHHHHHHHHHHHTTCCEEEECSBCC-C-------CCCBCCHHHHHHHHH-HHHHHHHHHTCCCE
T ss_pred CCCEEEECCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCC-CcccCCCCCCeecCHHHHHHHHH-HHHHHHHhcCCCEE
Confidence 67888776 34 588899999999999999999975432 23222112334444334444444 44333 256777
Q ss_pred EEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe---cC-
Q psy2386 119 VKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---GG- 194 (311)
Q Consensus 119 vKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---Gg- 194 (311)
|=-|..--.....++.++-++...++|+|.|-+++-+ +.+.++++.+.++..|+.+| ||
T Consensus 157 I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~-----------------~~~ei~~~~~~~~~~Pl~~n~~~~g~ 219 (302)
T 3fa4_A 157 VIARTDSLQTHGYEESVARLRAARDAGADVGFLEGIT-----------------SREMARQVIQDLAGWPLLLNMVEHGA 219 (302)
T ss_dssp EEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTCC-----------------CHHHHHHHHHHTTTSCEEEECCTTSS
T ss_pred EEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCCC-----------------CHHHHHHHHHHhcCCceeEEEecCCC
Confidence 7777632111235577888999999999999998764 45778999998845888776 22
Q ss_pred --CCCHHHHHHHHhhcCEEEEehhhh
Q psy2386 195 --IKTKKEIDLHLNYIDGVMLGREAY 218 (311)
Q Consensus 195 --I~s~~da~~~l~~adgVmigRa~l 218 (311)
..|.++..++ .+..|..+-.++
T Consensus 220 ~p~~~~~eL~~l--Gv~~v~~~~~~~ 243 (302)
T 3fa4_A 220 TPSISAAEAKEM--GFRIIIFPFAAL 243 (302)
T ss_dssp SCCCCHHHHHHH--TCSEEEETTTTH
T ss_pred CCCCCHHHHHHc--CCCEEEEchHHH
Confidence 3455555443 377777775543
No 254
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.30 E-value=0.0032 Score=54.37 Aligned_cols=136 Identities=13% Similarity=0.134 Sum_probs=86.5
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD 127 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~ 127 (311)
+=+-+. ..|+.+.+ .+.++|+|.|-+|.... .+-+.+.++.+++. +.++.+++-.+++
T Consensus 61 lD~kl~-dip~t~~~---~~~~~Gad~itvh~~~g----------------~~~l~~~~~~~~~~-g~~~~~~ll~~~t- 118 (216)
T 1q6o_A 61 ADAKIA-DAGKILSR---MCFEANADWVTVICCAD----------------INTAKGALDVAKEF-NGDVQIELTGYWT- 118 (216)
T ss_dssp EEEEEC-SCHHHHHH---HHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHT-TCEEEEEECSCCC-
T ss_pred EEEEec-ccHHHHHH---HHHhCCCCEEEEeccCC----------------HHHHHHHHHHHHHc-CCCceeeeeeCCC-
Confidence 345565 46887765 45679999999994321 23355666777663 7776665542333
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEec-CccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHH
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHA-RNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHL 205 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~-Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l 205 (311)
. .-++.+++.|.+.+.+|- +.....|+.| ..+.++++++..+ ++||++-|||+ ++.+.+++
T Consensus 119 -~------~~~~~l~~~~~~~~vl~~a~~~~~~G~~g---------~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~ 181 (216)
T 1q6o_A 119 -W------EQAQQWRDAGIGQVVYHRSRDAQAAGVAW---------GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFK 181 (216)
T ss_dssp -H------HHHHHHHHTTCCEEEEECCHHHHHTTCCC---------CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGT
T ss_pred -h------hhHHHHHhcCcHHHHHHHHHHHHhcCCCC---------CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHH
Confidence 1 122445566877777763 2221234432 2355666665442 58899999998 78888888
Q ss_pred hh-cCEEEEehhhhhCCc
Q psy2386 206 NY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 206 ~~-adgVmigRa~l~~P~ 222 (311)
+. ||++.+||+++..+.
T Consensus 182 ~aGad~ivvG~~I~~a~d 199 (216)
T 1q6o_A 182 GIPIHVFIAGRSIRDAAS 199 (216)
T ss_dssp TSCCSEEEESHHHHTSSC
T ss_pred HcCCCEEEEeehhcCCCC
Confidence 76 999999999987544
No 255
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=97.27 E-value=0.00064 Score=64.56 Aligned_cols=135 Identities=11% Similarity=-0.061 Sum_probs=95.6
Q ss_pred HHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHHHHHHHH
Q psy2386 62 KSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFVRDFVG 139 (311)
Q Consensus 62 ~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~~e~~~ 139 (311)
+.++.+.+.||..+-+..|-|... ....|..-..+++.-.+.++++|+++ ++++.|...-+|+. ++..++++
T Consensus 158 ~~a~~~~~~G~~~~Kik~g~~~~~--~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~----~~A~~~~~ 231 (400)
T 4dxk_A 158 ELAHSLLEDGITAMKIWPFDAAAE--KTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQL----LPAMQIAK 231 (400)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHH--HHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCH----HHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEcCCCcccc--ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCH----HHHHHHHH
Confidence 344456678999999986532110 00011101124566778899999987 47888877767764 35688999
Q ss_pred HHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhh
Q psy2386 140 TVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREA 217 (311)
Q Consensus 140 ~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~ 217 (311)
.|++.|+++|-- ..++-|++..+++++.. ++||.+.+.+.+++++.++++. +|.|++--+-
T Consensus 232 ~L~~~~i~~iEe----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~ 294 (400)
T 4dxk_A 232 ALTPYQTFWHED----------------PIKMDSLSSLTRYAAVS-PAPISASETLGSRWAFRDLLETGAAGVVMLDISW 294 (400)
T ss_dssp HTGGGCCSEEEC----------------CBCTTSGGGHHHHHHHC-SSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTT
T ss_pred HHhhcCCCEEEc----------------CCCcccHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 999999998841 01224777888999998 7999999999999999999975 9999986444
Q ss_pred hh
Q psy2386 218 YK 219 (311)
Q Consensus 218 l~ 219 (311)
.+
T Consensus 295 ~G 296 (400)
T 4dxk_A 295 CG 296 (400)
T ss_dssp TT
T ss_pred cC
Confidence 33
No 256
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=97.20 E-value=0.0025 Score=57.42 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=67.2
Q ss_pred CHHHHHH-HHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe------------
Q psy2386 56 EPKKLAK-SAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR------------ 122 (311)
Q Consensus 56 ~~~~~~~-aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR------------ 122 (311)
+|++..+ |.++++++|+++|.|--| +.+.+.|+++.++ ++||.-=+-
T Consensus 110 s~~~a~~na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf 169 (281)
T 1oy0_A 110 GPTAALAAATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGF 169 (281)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC---------
T ss_pred CHHHHHHHHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCe
Confidence 6877555 666777799999999633 2344555666554 788762111
Q ss_pred --ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 123 --IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 123 --~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
.|-++ ..+++++-++.++++|++.|.+.+-. -+.++++.+.+ ++|+|+-|.
T Consensus 170 ~v~grt~--~a~~~i~rA~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 222 (281)
T 1oy0_A 170 RVQGRGD--AAEQTIADAIAVAEAGAFAVVMEMVP------------------AELATQITGKL-TIPTVGIGA 222 (281)
T ss_dssp -----CH--HHHHHHHHHHHHHHHTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred EEEeCcH--HHHHHHHHHHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeCC
Confidence 11121 23568888999999999999997642 26788999998 799998763
No 257
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=97.18 E-value=0.0044 Score=55.63 Aligned_cols=107 Identities=10% Similarity=0.110 Sum_probs=73.9
Q ss_pred CeEEEec--C--CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 47 PIAFQVG--D--NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 47 p~~~Ql~--g--~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
++++-+- + .+|++..+.|.++.++|+++|.|--| +.+.+.|+++.++ ++||..=+.
T Consensus 80 ~vvaD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiG 139 (275)
T 1o66_A 80 MIVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG-------------------VWMAETTEFLQMR-GIPVCAHIG 139 (275)
T ss_dssp EEEEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHHT-TCCEEEEEE
T ss_pred eEEEECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHHc-CCCeEeeec
Confidence 4556654 2 36888888777777799999999633 2345556666553 788863332
Q ss_pred c--------------cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCe
Q psy2386 123 I--------------GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELE 188 (311)
Q Consensus 123 ~--------------g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ip 188 (311)
+ |-+ +..+++++-++.++++|++.|.+.+-. -+.++++.+.+ ++|
T Consensus 140 LtPQs~~~~ggf~v~grt--~~a~~~i~rA~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP 198 (275)
T 1o66_A 140 LTPQSVFAFGGYKVQGRG--GKAQALLNDAKAHDDAGAAVVLMECVL------------------AELAKKVTETV-SCP 198 (275)
T ss_dssp SCGGGTTC-------------CHHHHHHHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHC-SSC
T ss_pred cCceeecccCCeEEEeCh--HHHHHHHHHHHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCC
Confidence 1 212 223578889999999999999987642 26788999998 799
Q ss_pred EEEecC
Q psy2386 189 IIINGG 194 (311)
Q Consensus 189 vi~nGg 194 (311)
+|+-|.
T Consensus 199 ~igIGa 204 (275)
T 1o66_A 199 TIGIGA 204 (275)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 998763
No 258
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.16 E-value=0.0011 Score=76.62 Aligned_cols=144 Identities=18% Similarity=0.212 Sum_probs=97.3
Q ss_pred CCCCCeEEEecCCCHHHH------HHHHHHHHHcC--CCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc
Q psy2386 43 AEEHPIAFQVGDNEPKKL------AKSAKIIQKWG--YDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE 114 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~------~~aa~~~~~~g--~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~ 114 (311)
+.+.|+.+.++-.+|..+ .+..+.+.+.| +|+|=+.+|.|. ++...++++.+++. +
T Consensus 480 ~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~---------------~ee~~~~i~~l~~~-G 543 (3089)
T 3zen_D 480 EPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPD---------------LEEAVDIIDELNEV-G 543 (3089)
T ss_dssp CTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCC---------------HHHHHHHHTSTTHH-H
T ss_pred CCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCc---------------hhHhHHHHHHHHHc-C
Confidence 346788888887777542 24556677788 788888878773 24455666666654 4
Q ss_pred ceeEE-EEeccCCCCCcHHHHHHHHHHHHHcCCC------EEEEecCccccccCCCCcCCCCCcCcHHHH----HHHHHh
Q psy2386 115 IDITV-KHRIGIDDINSYDFVRDFVGTVSSAGCR------TFIVHARNAFLKKLNPKQNRKIPILKYNFV----YNLKKD 183 (311)
Q Consensus 115 ~pvsv-KiR~g~~~~~~~~~~~e~~~~l~~~G~~------~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i----~~i~~~ 183 (311)
+.+.. +... .+-++++++.|++ .|++.|-++ +|..+.. .-...+ .++++.
T Consensus 544 i~~i~~~~~t-----------~~~a~~~~~i~~d~~~~~y~vv~~G~ea--GGH~g~~------~~~~ll~~~~~~ir~~ 604 (3089)
T 3zen_D 544 ISHVVFKPGT-----------VEQIRSVIRIAAEVPTKPVIVHIEGGRA--GGHHSWE------DLDDLLLATYSELRSR 604 (3089)
T ss_dssp HCSEEECCCS-----------HHHHHHHHHHHTTSTTSCEEEEECCSSS--SEECCSC------CHHHHHHHHHHHHTTC
T ss_pred CEEEEEeCCC-----------HHHHHHHHHhhhhcCCCcEEEEEeCCCc--CCCCCcc------cHHHHHHHHHHHHhhc
Confidence 44322 3221 3456667777777 788877663 3332221 112445 677776
Q ss_pred CCCCeEEEecCCCCHHHHHHHH-----------hh-cCEEEEehhhhhCCc
Q psy2386 184 FPELEIIINGGIKTKKEIDLHL-----------NY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 184 ~~~ipvi~nGgI~s~~da~~~l-----------~~-adgVmigRa~l~~P~ 222 (311)
. ++||++.|||.+++++..++ .. ||||++|+.++.-+.
T Consensus 605 ~-~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 605 S-NITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp T-TEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred C-CCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcc
Confidence 6 89999999999999999999 54 999999999987654
No 259
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.14 E-value=0.0029 Score=59.32 Aligned_cols=97 Identities=14% Similarity=0.201 Sum_probs=69.3
Q ss_pred ChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 98 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
+++...+.++.+++.-..+|.+ -++.... ..+.++.+.++|++.|.++.-. |.+ +.-.+.|
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga--~vg~~~~-----~~~~~~~lieaGvd~I~idta~----G~~--------~~~~~~I 140 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGA--AVGAAPG-----NEERVKALVEAGVDVLLIDSSH----GHS--------EGVLQRI 140 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEE--ECCSCTT-----CHHHHHHHHHTTCSEEEEECSC----TTS--------HHHHHHH
T ss_pred CHHHHHHHHHHHHhcCceeEEE--EeccChh-----HHHHHHHHHhCCCCEEEEeCCC----CCC--------HHHHHHH
Confidence 5777788888888753344443 3343322 2577899999999999986321 110 1124678
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmig 214 (311)
+++++.+|++||++ |.+.|+++++++.+. ||+|.+|
T Consensus 141 ~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 141 RETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 89999887888876 789999999999877 9999995
No 260
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=97.11 E-value=0.0064 Score=54.14 Aligned_cols=140 Identities=18% Similarity=0.125 Sum_probs=91.2
Q ss_pred CCeEEEe---cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEE
Q psy2386 46 HPIAFQV---GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITV 119 (311)
Q Consensus 46 ~p~~~Ql---~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsv 119 (311)
.|+++=+ +|+++ .+.++.+.++|+++|.|-=+...+ |. -+-+.+...+-|++++++. ++|+.|
T Consensus 81 ~pviaD~~~Gyg~~~---~~~~~~l~~aGa~gv~iEd~~~~~-------~k-~l~~~~e~~~~I~a~~~a~~~~g~~~~v 149 (255)
T 2qiw_A 81 IPVSVDVESGYGLSP---ADLIAQILEAGAVGINVEDVVHSE-------GK-RVREAQEHADYIAAARQAADVAGVDVVI 149 (255)
T ss_dssp SCEEEECTTCTTCCH---HHHHHHHHHTTCCEEEECSEEGGG-------TT-EECCHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCEEeccCCCcCcHH---HHHHHHHHHcCCcEEEECCCCCCC-------CC-cccCHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 6777765 35566 666666667999999997543110 22 2345566666677776652 688777
Q ss_pred EEecc-----CCC-CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe-
Q psy2386 120 KHRIG-----IDD-INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN- 192 (311)
Q Consensus 120 KiR~g-----~~~-~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n- 192 (311)
--|.+ .++ .+..+++++-++.++++|++.|.+++-. +.+.++++.+.+ ++|+-.+
T Consensus 150 ~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~-----------------~~~~~~~i~~~~-~~P~n~~~ 211 (255)
T 2qiw_A 150 NGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLS-----------------TAEQVERLVDAV-SVPVNITA 211 (255)
T ss_dssp EEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCCC-----------------SHHHHHHHHTTC-SSCBEEEC
T ss_pred EEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCCC-----------------CHHHHHHHHHhC-CCCEEEEe
Confidence 66754 221 2235678888999999999999998753 457899999998 6887665
Q ss_pred -cCC----CCHHHHHHHHhhcCEEEEehh
Q psy2386 193 -GGI----KTKKEIDLHLNYIDGVMLGRE 216 (311)
Q Consensus 193 -GgI----~s~~da~~~l~~adgVmigRa 216 (311)
++- .|.++..++ .+..|..|-.
T Consensus 212 ~~~~~~p~~~~~eL~~l--Gv~~v~~~~~ 238 (255)
T 2qiw_A 212 HPVDGHGAGDLATLAGL--GVRRVTFGPL 238 (255)
T ss_dssp BTTTBBTTBCHHHHHHT--TCCEEECTTH
T ss_pred cCCCCCCCCCHHHHHHc--CCCEEEEHHH
Confidence 333 344333322 2777766644
No 261
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=97.10 E-value=0.0052 Score=55.23 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 135 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~ 135 (311)
+++...+-|+...+.|+|.||||++.+ ..+.++.+..+++++++.+++|++|-..- .
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~~~~pisIDT~~-----------~ 88 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEVVDLPCCLDSTN-----------P 88 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHHCCCCEEEECSC-----------H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHhCCCeEEEeCCC-----------H
Confidence 345555556666678999999997663 33568899999999999889999996441 3
Q ss_pred HHHHHHHHc--CCCEEE-Eec
Q psy2386 136 DFVGTVSSA--GCRTFI-VHA 153 (311)
Q Consensus 136 e~~~~l~~~--G~~~it-vh~ 153 (311)
+.++...++ |++.|- +.+
T Consensus 89 ~v~~aal~a~~Ga~iINdvs~ 109 (271)
T 2yci_X 89 DAIEAGLKVHRGHAMINSTSA 109 (271)
T ss_dssp HHHHHHHHHCCSCCEEEEECS
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 556666666 887774 443
No 262
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=97.09 E-value=0.0033 Score=59.40 Aligned_cols=135 Identities=8% Similarity=0.126 Sum_probs=94.8
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
..|+-..+...+|+.+++.++...+.||..|-+..|.. +++.-.+.++++|+.+ +..+.|-..-
T Consensus 133 ~v~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~~~~L~vDaN~ 197 (389)
T 3s5s_A 133 ALTTDITITTGSPERAEEAARRAAAMGFRALKVKVGGR---------------LAASDPARIEAIHAAAPGASLILDGNG 197 (389)
T ss_dssp EEECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCTTCEEEEECTT
T ss_pred ceEEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 34455677778999999988888778999999976532 1233344566777765 3344444444
Q ss_pred cCCCCCcHHHHHHHHHHH--HHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTV--SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l--~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
+|+ .++..++++.+ ++.++.+| ++ ..++-|++..+++++.. .+||.+.=.+.+..|+
T Consensus 198 ~w~----~~~A~~~~~~L~~~~~~i~~i---------------Ee-P~~~~d~~~~~~l~~~~-~iPIa~dEs~~~~~~~ 256 (389)
T 3s5s_A 198 GLT----AGEALALVAHARRLGADVALL---------------EQ-PVPRDDWDGMKEVTRRA-GVDVAADESAASAEDV 256 (389)
T ss_dssp CSC----HHHHHHHHHHHHHTTCEEEEE---------------EC-CSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHH
T ss_pred CCC----HHHHHHHHHHHhhCCCCeEEE---------------EC-CCCcccHHHHHHHHhhC-CCCEEECCCCCCHHHH
Confidence 554 33567889999 44444444 11 12235899999999988 7999998899999999
Q ss_pred HHHHhh--cCEEEEeh
Q psy2386 202 DLHLNY--IDGVMLGR 215 (311)
Q Consensus 202 ~~~l~~--adgVmigR 215 (311)
.++++. +|.|++==
T Consensus 257 ~~~i~~~a~d~v~~k~ 272 (389)
T 3s5s_A 257 LRVAAERAATVVNIKL 272 (389)
T ss_dssp HHHHHTTCCSEEEECH
T ss_pred HHHHHcCCCCEEEecC
Confidence 999875 99998853
No 263
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=97.06 E-value=0.0028 Score=60.02 Aligned_cols=144 Identities=10% Similarity=0.053 Sum_probs=97.4
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEecc
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 124 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g 124 (311)
.|+-..+...+|+++++.++...+.||..|-+..|.+.+.. .-...++.-.+.++++|+++ +..+.|-..-+
T Consensus 155 v~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~ 227 (393)
T 3u9i_A 155 LETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAPTARLILDGNCG 227 (393)
T ss_dssp EECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSC
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCCCCeEEEEccCC
Confidence 44555677789999999998888889999999887653210 00122455566778888876 34455544445
Q ss_pred CCCCCcHHHHHHHHHHH--HHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTV--SSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l--~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
|+. ++..++++.+ ++.++.+|- + ..++-|++..+++++.. .+||.+.=.+.|..++.
T Consensus 228 w~~----~~A~~~~~~L~~~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 286 (393)
T 3u9i_A 228 YTA----PDALRLLDMLGVHGIVPALFE---------------Q-PVAKDDEEGLRRLTATR-RVPVAADESVASATDAA 286 (393)
T ss_dssp CCH----HHHHHHHHTTTTTTCCCSEEE---------------C-CSCTTCTTHHHHHHHTC-SSCEEESTTCCSHHHHH
T ss_pred CCH----HHHHHHHHHHhhCCCCeEEEE---------------C-CCCCCcHHHHHHHHhhC-CCcEEeCCcCCCHHHHH
Confidence 553 3567888888 667777761 1 12234788899999987 69999988999999999
Q ss_pred HHHhh--cCEEEEehhh
Q psy2386 203 LHLNY--IDGVMLGREA 217 (311)
Q Consensus 203 ~~l~~--adgVmigRa~ 217 (311)
++++. +|.|++==+-
T Consensus 287 ~~i~~~a~d~i~~k~~~ 303 (393)
T 3u9i_A 287 RLARNAAVDVLNIKLMK 303 (393)
T ss_dssp HHHHTTCCSEEEECHHH
T ss_pred HHHHcCCCCEEEecccc
Confidence 99975 9999885443
No 264
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=97.04 E-value=0.012 Score=55.01 Aligned_cols=138 Identities=12% Similarity=0.134 Sum_probs=100.7
Q ss_pred eEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEecc
Q psy2386 48 IAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG 124 (311)
Q Consensus 48 ~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g 124 (311)
+...+. +.+++.+.++++.+.+.||..+-+..|-. +++.-.+.++++++.+ ++.+.|-..-+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~~---------------~~~~d~~~v~avr~~~g~~~~l~vDaN~~ 198 (370)
T 2chr_A 134 IAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVNQA 198 (370)
T ss_dssp BEEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSSS---------------CHHHHHHHHHHHHHHTTTTSEEEEECTTC
T ss_pred eeeeeccCchhhhHHHHHHHHhhcccceeecccccC---------------ChHHHHHHHHHHHHhcCCCcEEEecCCCC
Confidence 333444 45677788888889999999988865532 3444456677888776 45666666667
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 204 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~ 204 (311)
|+.. +..++++.+++.++.+|- + ..++-|++..+++++.. ++||.+.=.+.|..|+.++
T Consensus 199 ~~~~----~A~~~~~~l~~~~~~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~ 257 (370)
T 2chr_A 199 WDEQ----VASVYIPELEALGVELIE---------------Q-PVGRENTQALRRLSDNN-RVAIMADESLSTLASAFDL 257 (370)
T ss_dssp CCTH----HHHHHHHHHHTTTCCEEE---------------C-CSCSSCHHHHHHHHHHC-SSEEEESSSCCSHHHHHHH
T ss_pred CCHH----HHHHHHHHHHhcCCceec---------------C-CCChhhhhhhhHHhhhc-cCCccCCccCCCHHHHHHH
Confidence 7643 568899999999988871 1 12335889999999998 7999998899999999999
Q ss_pred Hhh--cCEEEEehhhhhCC
Q psy2386 205 LNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 205 l~~--adgVmigRa~l~~P 221 (311)
++. +|.|++==.-.+..
T Consensus 258 ~~~~a~d~i~~d~~~~GGi 276 (370)
T 2chr_A 258 ARDRSVDVFSLKLCNMGGV 276 (370)
T ss_dssp HTTTCCSEECCCHHHHTSH
T ss_pred HHcCCCcEEEeCCcccCCH
Confidence 975 99888754444433
No 265
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.03 E-value=0.011 Score=51.41 Aligned_cols=135 Identities=19% Similarity=0.158 Sum_probs=81.6
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc--ceeEEEEeccCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDD 127 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~--~pvsvKiR~g~~~ 127 (311)
+-+. ..|+.++++ +.++|+|.|.+|..+. .+-+.+.++++++.-. ..+.|-+-..++
T Consensus 65 lKl~-Dip~t~~~~---~~~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~- 123 (221)
T 3exr_A 65 TKCA-DAGGTVAKN---NAVRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVELYGDWT- 123 (221)
T ss_dssp EEEC-SCHHHHHHH---HHTTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEECCSSCC-
T ss_pred EEee-ccHHHHHHH---HHHcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEEcCCCC-
Confidence 4555 668888766 5678999999995433 2335556666655321 223333332221
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEec-CccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHH
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHA-RNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHL 205 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~-Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l 205 (311)
.+-++.+.+.|++.+.+|- +.....|.. ...+.++.+++.. +++++...||| +++++.++.
T Consensus 124 -------~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv---------~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~ 186 (221)
T 3exr_A 124 -------YDQAQQWLDAGISQAIYHQSRDALLAGET---------WGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFE 186 (221)
T ss_dssp -------HHHHHHHHHTTCCEEEEECCHHHHHHTCC---------CCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGT
T ss_pred -------HHHHHHHHcCCHHHHHHHHHHhcCCCccc---------cCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHH
Confidence 2334456778999988873 222222311 1233455555433 25889999999 567777666
Q ss_pred hh-cCEEEEehhhhhCCc
Q psy2386 206 NY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 206 ~~-adgVmigRa~l~~P~ 222 (311)
+. ||.+.+||+++..+.
T Consensus 187 ~aGad~~VvG~~I~~a~d 204 (221)
T 3exr_A 187 GVDVFTFIAGRGITEAKN 204 (221)
T ss_dssp TCCCSEEEECHHHHTSSS
T ss_pred HCCCCEEEECchhhCCCC
Confidence 55 999999999876543
No 266
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.02 E-value=0.013 Score=53.98 Aligned_cols=149 Identities=15% Similarity=0.165 Sum_probs=86.1
Q ss_pred HHHHHHHcCCCEEEeccC--CCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE--ec-cCCCCCcH------
Q psy2386 63 SAKIIQKWGYDEINLNCG--CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH--RI-GIDDINSY------ 131 (311)
Q Consensus 63 aa~~~~~~g~d~IdiN~g--CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi--R~-g~~~~~~~------ 131 (311)
.++.+.+.|+|+|-+.+- ...+.-.+ .+..+.+.++.+++++ .++|+.+=+ +. +..+..+.
T Consensus 115 sve~a~~~GADAVk~lv~~g~d~~~e~~-------~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVDGDPQVN-------VQKQAYIERIGSECQA-EDIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTTSCHHHH-------HHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred CHHHHHHcCCCEEEEEEEcCCCchHHHH-------HHHHHHHHHHHHHHHH-cCCceEEEEeccCCCCCCCcchhhhccC
Confidence 467788899999877632 11110000 0123466666666655 399988754 32 11122111
Q ss_pred -HHHHHHHHHH--HHcCCCEEEEec-Ccc-ccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-EecCCCCHHHHHHHH
Q psy2386 132 -DFVRDFVGTV--SSAGCRTFIVHA-RNA-FLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-INGGIKTKKEIDLHL 205 (311)
Q Consensus 132 -~~~~e~~~~l--~~~G~~~itvh~-Rt~-~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~nGgI~s~~da~~~l 205 (311)
+.+...++.+ .+.|+|.+-+.- .+. ...|+...+.-|+.....+..+++.+.. .+|+| .+||+ |.++..+++
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~-~~P~v~lsgG~-~~~~fl~~v 264 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST-DLPYIYLSAGV-SAELFQETL 264 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC-SSCEEEECTTC-CHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC-CCCEEEECCCC-CHHHHHHHH
Confidence 1255667777 577999998751 111 1123332222222211224466777776 69965 79998 677888777
Q ss_pred hh-----c--CEEEEehhhhhCC
Q psy2386 206 NY-----I--DGVMLGREAYKNP 221 (311)
Q Consensus 206 ~~-----a--dgVmigRa~l~~P 221 (311)
+. | .||.+||....+.
T Consensus 265 ~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 265 VFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHcCCCcceEEeeHHHHHhh
Confidence 42 8 9999999997774
No 267
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.94 E-value=0.0051 Score=56.94 Aligned_cols=96 Identities=16% Similarity=0.230 Sum_probs=68.7
Q ss_pred CChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcC--CCEEEEecCccccccCCCCcCCCCCcCcH
Q psy2386 97 TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAG--CRTFIVHARNAFLKKLNPKQNRKIPILKY 174 (311)
Q Consensus 97 ~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G--~~~itvh~Rt~~~~G~~g~~~~~~~~~~~ 174 (311)
.+++...+.++.+++. +.|+++.+ |+.. +..+.++.+.+.| ++.+.++.. +|. +...|
T Consensus 78 ~~~~~~~~~i~~~~~~-g~~v~v~~--g~~~-----~~~~~a~~~~~~g~~~~~i~i~~~----~G~--------~~~~~ 137 (336)
T 1ypf_A 78 FQPEKRISFIRDMQSR-GLIASISV--GVKE-----DEYEFVQQLAAEHLTPEYITIDIA----HGH--------SNAVI 137 (336)
T ss_dssp SSGGGHHHHHHHHHHT-TCCCEEEE--CCSH-----HHHHHHHHHHHTTCCCSEEEEECS----SCC--------SHHHH
T ss_pred CCCHHHHHHHHHHHhc-CCeEEEeC--CCCH-----HHHHHHHHHHhcCCCCCEEEEECC----CCC--------cHHHH
Confidence 3455566777776653 67888873 5432 2356788899999 999988642 121 12468
Q ss_pred HHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 175 NFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 175 ~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
+.|+++++.++ .|++..|.|.|+++++++.+. ||+|.+
T Consensus 138 ~~i~~lr~~~~-~~~vi~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 138 NMIQHIKKHLP-ESFVIAGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCC-CCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 99999999984 444556779999999999987 999999
No 268
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.87 E-value=0.0019 Score=60.43 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
...+.++.+.++|+|.|++|.-. |++ ..-|+.|+++++..|++||++ |+|.|+++++.+.+. ||+|
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~----G~~--------~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aGaD~I 166 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAH----AHA--------KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCGADII 166 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSC----CSS--------HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC----CCc--------HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcCCCEE
Confidence 35788999999999999997432 111 124788999999876789887 679999999999987 9999
Q ss_pred EEe
Q psy2386 212 MLG 214 (311)
Q Consensus 212 mig 214 (311)
.+|
T Consensus 167 ~Vg 169 (361)
T 3r2g_A 167 KAG 169 (361)
T ss_dssp EEC
T ss_pred EEc
Confidence 995
No 269
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=96.87 E-value=0.0045 Score=58.40 Aligned_cols=126 Identities=11% Similarity=0.059 Sum_probs=92.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
+.+++.+++.++.+.+.||..+-+..|-+ +++.=.+.++++|+++ ++.+.|-..-+|+.
T Consensus 162 ~~~~~~~~~~~~~~~~~G~~~~Kikvg~~---------------~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~---- 222 (388)
T 4h83_A 162 GEPLGSIADEMHNYQELGLAGVKFKVGGL---------------SAAEDAARITAAREAAGDDFIICIDANQGYKP---- 222 (388)
T ss_dssp TCTTCSHHHHHHHHHHHTBSEEEEECSSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCH----
T ss_pred CCCHHHHHHHHHHHHHcCCceEeecCCCC---------------CHHHHHHHHHHHHHhcCCCeEEEEecCcCCCH----
Confidence 44567888888888888999999875422 2333345677777776 46666766666754
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cC
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--ID 209 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--ad 209 (311)
++..++++.+++.++.+|- +.-.+.-|++..+++++.. ++||.+.=.+.|..|+.++++. +|
T Consensus 223 ~~A~~~~~~l~~~~~~~iE---------------eP~~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d 286 (388)
T 4h83_A 223 AVAVDLSRRIADLNIRWFE---------------EPVEWHNDKRSMRDVRYQG-SVPVCAGQTEFSASGCRDLMETGAID 286 (388)
T ss_dssp HHHHHHHHHTTTSCCCCEE---------------SCBCSTTHHHHHHHHHHHS-SSCEEECTTCSSHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhhhcCcceee---------------cCcccccchHHHHHHHhhc-CCCccCCccccChHhHHHHHHcCCCC
Confidence 3568899999999888772 1111113577888999988 7999998899999999999975 99
Q ss_pred EEEEe
Q psy2386 210 GVMLG 214 (311)
Q Consensus 210 gVmig 214 (311)
.|++=
T Consensus 287 ~i~~d 291 (388)
T 4h83_A 287 VCNFD 291 (388)
T ss_dssp EECCC
T ss_pred eEeec
Confidence 88774
No 270
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.86 E-value=0.0072 Score=56.54 Aligned_cols=94 Identities=11% Similarity=0.229 Sum_probs=72.0
Q ss_pred ChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 98 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
+++...+.++.+++..+.||.+-+-.. . .+.++.+.++|++.|+++.-. |. +..-.+.+
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~--~-------~e~a~~l~eaGad~I~ld~a~----G~--------~~~~~~~i 137 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVN--E-------IERAKLLVEAGVDVIVLDSAH----GH--------SLNIIRTL 137 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTT--C-------HHHHHHHHHTTCSEEEECCSC----CS--------BHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCC--H-------HHHHHHHHHcCcCeEEEeCCC----CC--------cHHHHHHH
Confidence 567778888999887788988876432 1 467888999999999986332 11 01124778
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmig 214 (311)
+++++.+ ++||++ |++.|+++++++.+. +|+|.+|
T Consensus 138 ~~i~~~~-~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 138 KEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHhc-CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 8999988 799987 678999999999877 9999996
No 271
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.84 E-value=0.0082 Score=53.39 Aligned_cols=82 Identities=7% Similarity=-0.013 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
+..++++.+++.|+++|.|-.-....+| ..+.+..+++.+ ++||..-+.|.+..++.+.++. ||+|
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G------------~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~V 132 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGG------------SLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAA 132 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCC------------CHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhcc------------CHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEE
Confidence 3579999999999999988432222222 467788888888 8999999999999999888876 9999
Q ss_pred EEehhhhhCCcchHHhHh
Q psy2386 212 MLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 212 migRa~l~~P~i~~~~~~ 229 (311)
.++-..+. ..++++.+
T Consensus 133 lL~~~~l~--~~l~~l~~ 148 (254)
T 1vc4_A 133 LLIVALLG--ELTGAYLE 148 (254)
T ss_dssp EEEHHHHG--GGHHHHHH
T ss_pred EECccchH--HHHHHHHH
Confidence 99999987 44555443
No 272
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=96.82 E-value=0.017 Score=53.22 Aligned_cols=124 Identities=8% Similarity=0.111 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc--ceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~--~pvsvKiR~g~~~~~~~~ 132 (311)
.+|+.+.+.++.+.+.||..+-|..|. .+++.-.+.++++|+.++ +.+.|-..-+|+. +
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~----~ 175 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDR----A 175 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCH----H
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCH----H
Confidence 467888888877778899999987652 234555677888888763 5555555555543 3
Q ss_pred HHHHHHHHHHHc---CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 133 FVRDFVGTVSSA---GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 133 ~~~e~~~~l~~~---G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
+..++++.+++. ++.+| ++ ..++-|++..+++++.. .+||.+.=.+.+..++.++++.
T Consensus 176 ~A~~~~~~l~~~~~~~i~~i---------------Eq-P~~~~d~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~~a 238 (332)
T 2ozt_A 176 TANRWFAWLDRHGNGKIEYV---------------EQ-PLPPDQWQALLSLAQTV-TTAIALDESVVSAAEVQRWVDRGW 238 (332)
T ss_dssp HHHHHHHHHHHHCCTTEEEE---------------EC-CSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhccCCccee---------------EC-CCCCCCHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHhCC
Confidence 567899999988 65555 11 11235899999999987 7999998899999999999976
Q ss_pred cCEEEEe
Q psy2386 208 IDGVMLG 214 (311)
Q Consensus 208 adgVmig 214 (311)
+|.+.+=
T Consensus 239 ~~~i~ik 245 (332)
T 2ozt_A 239 PGFFVIK 245 (332)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 7877764
No 273
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=96.81 E-value=0.0082 Score=56.50 Aligned_cols=135 Identities=12% Similarity=0.179 Sum_probs=95.1
Q ss_pred CeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEecc
Q psy2386 47 PIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 124 (311)
Q Consensus 47 p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g 124 (311)
|+-..++ +.+++++.+.++.+.+.||..+-+..| | ..|.+ .++++++++ ++.+.+...-+
T Consensus 151 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d~~----~v~avr~a~~~~~l~vDaN~~ 212 (386)
T 1wue_A 151 PVGISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIR-P-------------GYDVE----PVALIRQHFPNLPLMVDANSA 212 (386)
T ss_dssp ECCEEECCCSCHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSHH----HHHHHHHHCTTSCEEEECTTC
T ss_pred EeeEEecCCCCHHHHHHHHHHHHHhhhheEEEeeC-c-------------HHHHH----HHHHHHHhCCCCeEEEeCCCC
Confidence 4444454 357999988888777889999998754 2 12333 356666655 45566666666
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 204 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~ 204 (311)
|+.. +. ++++.+++.++.+|- + ..++-||+..+++++.. .+||.+.=.+.|..++.++
T Consensus 213 ~~~~----~a-~~~~~l~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~ 270 (386)
T 1wue_A 213 YTLA----DL-PQLQRLDHYQLAMIE--------Q--------PFAADDFLDHAQLQREL-KTRICLDENIRSLKDCQVA 270 (386)
T ss_dssp CCGG----GH-HHHHGGGGSCCSCEE--------C--------CSCTTCSHHHHHHHTTC-SSCEEECTTCCSHHHHHHH
T ss_pred CCHH----HH-HHHHHHHhCCCeEEe--------C--------CCCcccHHHHHHHHHhc-CCCEEeCCccCCHHHHHHH
Confidence 7642 35 788888888888772 1 12235788899999887 7999998899999999999
Q ss_pred Hhh--cCEEEEehhhhhCC
Q psy2386 205 LNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 205 l~~--adgVmigRa~l~~P 221 (311)
++. +|.|++==.-.+..
T Consensus 271 i~~~a~d~i~ik~~~~GGi 289 (386)
T 1wue_A 271 LALGSCRSINLKIPRVGGI 289 (386)
T ss_dssp HHHTCCSEEEECHHHHTSH
T ss_pred HHcCCCCEEEEchhhhCCH
Confidence 975 99999854444443
No 274
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.81 E-value=0.0045 Score=52.69 Aligned_cols=69 Identities=10% Similarity=0.091 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
..-++.+.+...|++-+-+ |. --+.|+++++.+ ++|||+.|.|+|.+|+.++++. |++|..
T Consensus 117 ~~~~~~i~~~~PD~iEiLP------Gi-----------~p~iI~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsT 178 (192)
T 3kts_A 117 NKGVALIQKVQPDCIELLP------GI-----------IPEQVQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTT 178 (192)
T ss_dssp HHHHHHHHHHCCSEEEEEC------TT-----------CHHHHHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECC------ch-----------hHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEe
Confidence 4455666777777775532 21 236899999998 8999999999999999999987 999999
Q ss_pred ehhhhhCC
Q psy2386 214 GREAYKNP 221 (311)
Q Consensus 214 gRa~l~~P 221 (311)
+...+++.
T Consensus 179 s~~~LW~~ 186 (192)
T 3kts_A 179 SNKHLWEG 186 (192)
T ss_dssp CCGGGGTT
T ss_pred CCHHHhCc
Confidence 98887764
No 275
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=96.79 E-value=0.0081 Score=57.77 Aligned_cols=121 Identities=12% Similarity=0.175 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~ 132 (311)
.+|+++++.|+...+ .||..+-|..|-+ +++.-.+.++++|+++ ++++.|-..-+|+. +
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~~----~ 250 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWTV----E 250 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCCH----H
Confidence 689999988887654 5999999975532 3444456677788776 45666666666654 3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 210 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adg 210 (311)
+.+++++.+++. +.+| |+. ..+++..+++++.. .+||.+.-.+.+..++.++++. +|.
T Consensus 251 ~Ai~~~~~L~~~-l~~i---------------EeP---~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~di 310 (445)
T 3va8_A 251 TSKWVAKELEGI-VEYL---------------EDP---AGEIEGMAAVAKEA-SMPLATNMAVVAFDHLPPSILQDAVQV 310 (445)
T ss_dssp HHHHHHHHTTTT-CSEE---------------ESC---BSHHHHHHHHHTTC-SSCEEESSSCCSGGGHHHHHHTTCCSE
T ss_pred HHHHHHHHHhhh-cCeE---------------eec---CcCHHHHHHHHHcC-CCCEEeCCccCCHHHHHHHHHcCCCCE
Confidence 567888988887 7666 111 13788889999988 6999998899999999999875 887
Q ss_pred EEEe
Q psy2386 211 VMLG 214 (311)
Q Consensus 211 Vmig 214 (311)
|++=
T Consensus 311 v~~d 314 (445)
T 3va8_A 311 ILSD 314 (445)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7773
No 276
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.78 E-value=0.0057 Score=54.63 Aligned_cols=149 Identities=8% Similarity=0.129 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHhCCCcEEEecc-eecccccC--Cc-----hhcccc-----CCCCC-CeEEEecCC---CHHHHHHHHHH
Q psy2386 4 TDRHCRMFHRQITRYSWLYTEM-FTTQAILG--NK-----KHCLDF-----NAEEH-PIAFQVGDN---EPKKLAKSAKI 66 (311)
Q Consensus 4 td~~fR~l~~~~g~~~l~~tem-v~a~~l~~--~~-----~~~l~~-----~~~~~-p~~~Ql~g~---~~~~~~~aa~~ 66 (311)
=|.++=+++.+-| .+..++.- +.. ..+| ++ +.++.. ...+. ++++-+--- +|++..+.|.+
T Consensus 25 yD~~sA~l~e~aG-~d~ilvGdsl~~-~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~r 102 (264)
T 1m3u_A 25 YDYSFAKLFADEG-LNVMLVGDSLGM-TVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT 102 (264)
T ss_dssp CSHHHHHHHHHHT-CCEEEECTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHH
T ss_pred cCHHHHHHHHHcC-CCEEEECHHHHH-HHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHH
Confidence 3667777777777 45555531 111 1112 11 222211 11233 456555421 78888877777
Q ss_pred HHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec---------cC----CCCCcHHH
Q psy2386 67 IQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI---------GI----DDINSYDF 133 (311)
Q Consensus 67 ~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~---------g~----~~~~~~~~ 133 (311)
+.++|+++|.|--| +.+.+.|+++.++ ++||.-=+-+ |+ ..+...++
T Consensus 103 l~kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~ 162 (264)
T 1m3u_A 103 VMRAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQ 162 (264)
T ss_dssp HHHTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHH
T ss_pred HHHcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHHHHHH
Confidence 77799999999632 2345556666554 7888632211 11 11112356
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
+++-++.++++|++.|.+.+-. -+.++++.+.+ ++|+|+-|
T Consensus 163 ~i~rA~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIG 203 (264)
T 1m3u_A 163 LLSDALALEAAGAQLLVLECVP------------------VELAKRITEAL-AIPVIGIG 203 (264)
T ss_dssp HHHHHHHHHHHTCCEEEEESCC------------------HHHHHHHHHHC-SSCEEEES
T ss_pred HHHHHHHHHHCCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeC
Confidence 7888999999999999997643 26788999998 79999876
No 277
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=96.77 E-value=0.022 Score=50.91 Aligned_cols=96 Identities=11% Similarity=0.130 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 135 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~ 135 (311)
+++...+-|+...+.|+|.||||+| +.....++.+.+++..+++.+++|++|-..- .
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g------------~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~-----------~ 79 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVG------------PAVQDKVSAMEWLVEVTQEVSNLTLCLDSTN-----------I 79 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECSC-----------H
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCC------------CCCCChHHHHHHHHHHHHHhCCCeEEEeCCC-----------H
Confidence 5666666667677789999999964 3334567888999999988779999986441 3
Q ss_pred HHHHHHHHc--CCCEEE-EecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE
Q psy2386 136 DFVGTVSSA--GCRTFI-VHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 191 (311)
Q Consensus 136 e~~~~l~~~--G~~~it-vh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~ 191 (311)
+.++...++ |++.|- |.+-. -+++.+..+.+.. +.|+++
T Consensus 80 ~v~~aAl~a~~Ga~iINdvs~~~----------------d~~~~~~~~~a~~-~~~vvl 121 (262)
T 1f6y_A 80 KAIEAGLKKCKNRAMINSTNAER----------------EKVEKLFPLAVEH-GAALIG 121 (262)
T ss_dssp HHHHHHHHHCSSCEEEEEECSCH----------------HHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHhhCCCCCEEEECCCCc----------------ccHHHHHHHHHHh-CCcEEE
Confidence 556666666 887774 44321 1343455555555 677776
No 278
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=96.77 E-value=0.011 Score=56.72 Aligned_cols=121 Identities=9% Similarity=0.152 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~ 132 (311)
.+|+++++.|+...+ .||..|-|..|-. +++.-.+.++++|+++ ++++.|-..-+|+. +
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~~----~ 252 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWTP----Q 252 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSCH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCCH----H
Confidence 689999998887654 5999999975532 3444456677787776 55677766667764 3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 210 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adg 210 (311)
+.+++++.+++. +.+| |+. ..+++..+++++.. .+||.+.-.+.+..++.++++. +|.
T Consensus 253 ~Ai~~~~~L~~~-l~~i---------------EeP---~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~di 312 (445)
T 3vdg_A 253 TSVKVAAGLEGV-LEYL---------------EDP---TPGLDGMAEVAAQA-PMPLATNMCVVAFDQLPAAVAKNSVQV 312 (445)
T ss_dssp HHHHHHHHTTTT-CSEE---------------ECC---SSSHHHHHHHHHHC-SSCEEESSSCCSGGGHHHHHHHTCCSE
T ss_pred HHHHHHHHHhhH-HHee---------------eCC---CCCHHHHHHHHhcC-CCCEEcCCcCCCHHHHHHHHHcCCCCE
Confidence 567889999887 7666 111 13788899999998 6999998899999999998865 887
Q ss_pred EEEe
Q psy2386 211 VMLG 214 (311)
Q Consensus 211 Vmig 214 (311)
|++=
T Consensus 313 v~~d 316 (445)
T 3vdg_A 313 VLSD 316 (445)
T ss_dssp EEEC
T ss_pred EeeC
Confidence 7763
No 279
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=96.76 E-value=0.012 Score=56.05 Aligned_cols=124 Identities=10% Similarity=0.072 Sum_probs=91.4
Q ss_pred cCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCc
Q psy2386 53 GDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINS 130 (311)
Q Consensus 53 ~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~ 130 (311)
...+++.+++.++...+.||..+-+..|-. ++...+.++++|+++ ++.+.|-..-+|+.
T Consensus 185 ~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~--- 245 (412)
T 4h1z_A 185 PEDTRAKRAELAAAWQAKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAHTA--- 245 (412)
T ss_dssp CCSSHHHHHHHHHHHHHTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCCCH---
T ss_pred CCCcHHHHHHHHHHHHhcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCCCH---
Confidence 345789999999888889999998864321 122334466777766 45666666666653
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--c
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--I 208 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--a 208 (311)
++..++++.+++.|+.++- + ..++-|++..+++++.. ++||.+.=.+.|..|+.++++. +
T Consensus 246 -~~A~~~~~~l~~~~l~~iE---------------q-P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 307 (412)
T 4h1z_A 246 -SEAVALIKAMEPHGLWFAE---------------A-PVRTEDIDGLARVAASV-STAIAVGEEWRTVHDMVPRVARRAL 307 (412)
T ss_dssp -HHHHHHHHHHGGGCEEEEE---------------C-CSCTTCHHHHHHHHHHC-SSEEEECTTCCSHHHHHHHHHTTCC
T ss_pred -HHHHHHHHhhcccccceec---------------C-CCCccchHHHHHHHhhc-CCccccCCcccchHhHHHHHHcCCC
Confidence 3568899999999877661 1 12335889999999998 7999998899999999999975 8
Q ss_pred CEEEE
Q psy2386 209 DGVML 213 (311)
Q Consensus 209 dgVmi 213 (311)
|.|++
T Consensus 308 div~~ 312 (412)
T 4h1z_A 308 AIVQP 312 (412)
T ss_dssp SEECC
T ss_pred CEEEe
Confidence 88775
No 280
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=96.76 E-value=0.02 Score=53.93 Aligned_cols=139 Identities=12% Similarity=0.144 Sum_probs=99.2
Q ss_pred CCCCeEEEecCCC-HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEE
Q psy2386 44 EEHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~g~~-~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKi 121 (311)
+..|+-..++..+ |+.+++.++...+.||..+-+..| | -.|.+ .++++|+.+ ++.+.|-.
T Consensus 136 ~~v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~-------------~~d~~----~v~avR~~~~~~~l~vDa 197 (388)
T 3qld_A 136 DRVEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P-------------GRDRA----AIKAVRLRYPDLAIAADA 197 (388)
T ss_dssp SEEEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T-------------TBSHH----HHHHHHHHCTTSEEEEEC
T ss_pred CeEEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c-------------HHHHH----HHHHHHHHCCCCeEEEEC
Confidence 3445666776555 999999998888889999999764 1 13444 455666655 45666666
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+..+ ... ++.+++.++.+|- + ..++.|++..+++++.. .+||.+.=.+.+..|+
T Consensus 198 N~~~~~~~----A~~-~~~l~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 255 (388)
T 3qld_A 198 NGSYRPED----APV-LRQLDAYDLQFIE---------------Q-PLPEDDWFDLAKLQASL-RTPVCLDESVRSVREL 255 (388)
T ss_dssp TTCCCGGG----HHH-HHHGGGGCCSCEE---------------C-CSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHH
T ss_pred CCCCChHH----HHH-HHHHhhCCCcEEE---------------C-CCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHH
Confidence 66776543 344 7888888877761 1 12335788899999998 7999998899999999
Q ss_pred HHHHhh--cCEEEEehhhhhCCc
Q psy2386 202 DLHLNY--IDGVMLGREAYKNPF 222 (311)
Q Consensus 202 ~~~l~~--adgVmigRa~l~~P~ 222 (311)
.++++. +|.|++==+-.+...
T Consensus 256 ~~~~~~~a~d~v~~k~~~~GGit 278 (388)
T 3qld_A 256 KLTARLGAARVLNVKPGRLGGFG 278 (388)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHH
T ss_pred HHHHHcCCCCEEEECchhhCCHH
Confidence 999975 999998655544443
No 281
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.72 E-value=0.059 Score=47.01 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCc-HHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINS-YDFV 134 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~-~~~~ 134 (311)
+++.+.+.|+-+++.|+.+|..+ . .+-++++|+.+++||.-..|..+.+.+- ....
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~ 90 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIE-------------------G----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPY 90 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE-------------------S----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCS
T ss_pred CcchHHHHHHHHHHCCCcEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCcc
Confidence 38899999999999999999873 1 2457889999999986444432211000 0001
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
.+-+..+.++|+|.|.+..... .+ +....++++++++. ++++++ ++.|.+++.++.+. +|.|.+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~----~~-------p~~l~~~i~~~~~~--g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFR----SR-------PVDIDSLLTRIRLH--GLLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSS----CC-------SSCHHHHHHHHHHT--TCEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECcccc----CC-------hHHHHHHHHHHHHC--CCEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 3446778899999998754321 00 11234667777663 577665 79999999998876 998864
No 282
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.65 E-value=0.12 Score=46.96 Aligned_cols=143 Identities=14% Similarity=0.232 Sum_probs=84.8
Q ss_pred CCCeEEEecCCC-HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccce----eEE
Q psy2386 45 EHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID----ITV 119 (311)
Q Consensus 45 ~~p~~~Ql~g~~-~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~p----vsv 119 (311)
+.+++.=+-=.| |+..+.+++.+.++|+|.|.+|.. |+ ++-+...+++.++.-..| |++
T Consensus 76 g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~-----------~G-----~~~m~aa~e~a~~~~~~~~llaVtv 139 (303)
T 3ru6_A 76 DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHAS-----------AG-----KIAIQEVMTRLSKFSKRPLVLAVSA 139 (303)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG-----------GC-----HHHHHHHHHHHTTSSSCCEEEEECS
T ss_pred CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEecc-----------CC-----HHHHHHHHHHHHhcCCCceEEEEEE
Confidence 456666555443 677777788888899999999932 11 344455555554432222 222
Q ss_pred EEeccCC------CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 120 KHRIGID------DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 120 KiR~g~~------~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
....+.. +.+..+....+++...++|++.+++.+. . +.++++.+++-.++..+
T Consensus 140 LTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~------------------E---~~~IR~~~~~~fl~VTP 198 (303)
T 3ru6_A 140 LTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF------------------E---SKKIKEHTSSNFLTLTP 198 (303)
T ss_dssp CTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT------------------T---HHHHHHHSCTTSEEEEC
T ss_pred ecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH------------------H---HHHHHHhCCCccEEECC
Confidence 2221100 0111123456777888899999876322 1 45677776555688888
Q ss_pred CCCCHH----------HHHHHHhh-cCEEEEehhhhhCCcch
Q psy2386 194 GIKTKK----------EIDLHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 194 gI~s~~----------da~~~l~~-adgVmigRa~l~~P~i~ 224 (311)
||+-.. .+.++++. +|.+.+||+++..+...
T Consensus 199 GIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~ 240 (303)
T 3ru6_A 199 GIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPR 240 (303)
T ss_dssp CCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHH
T ss_pred CcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHH
Confidence 887211 23344444 99999999999866543
No 283
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=96.59 E-value=0.042 Score=51.32 Aligned_cols=132 Identities=12% Similarity=0.096 Sum_probs=94.0
Q ss_pred CCeEEEecC--CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 46 HPIAFQVGD--NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 46 ~p~~~Ql~g--~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
.|+-..++. .+++++.+.++.+.+.||..+-+..|- +++.-.+.++++++++ ++.+.|..
T Consensus 132 vp~~~~~g~~~~~~~~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDa 195 (372)
T 3cyj_A 132 VPVYGSGGFTSYPLRRLQEQLGGWAAAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDA 195 (372)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 344444322 256778777777777899999986441 4454566777777776 45666666
Q ss_pred eccCCCCCcHHHHHHHHHHHHHc-CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC-CeEEEecCCCCHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSA-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTKK 199 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~-G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~-ipvi~nGgI~s~~ 199 (311)
.-+|+. ++..++++.+++. ++.+|- + ..++-||+..+++++..+. +||.+.=-+.|..
T Consensus 196 N~~~~~----~~a~~~~~~l~~~~~i~~iE--------q--------P~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~ 255 (372)
T 3cyj_A 196 NGAYTR----KQALYWAGAFAREAGISYLE--------E--------PVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLP 255 (372)
T ss_dssp TTCSCH----HHHHHHHHHHHHHHCCCEEE--------C--------SSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHH
T ss_pred CCCCCH----HHHHHHHHHHHhhcCCcEEE--------C--------CCCcccHHHHHHHHHhCCCCCCEECCCCccCHH
Confidence 656653 3578899999998 888771 1 1123489999999998732 7999988999999
Q ss_pred HHHHHHhh-cCEEEEe
Q psy2386 200 EIDLHLNY-IDGVMLG 214 (311)
Q Consensus 200 da~~~l~~-adgVmig 214 (311)
++.++ .. +|.|++=
T Consensus 256 ~~~~~-~~a~d~i~ik 270 (372)
T 3cyj_A 256 QLHDL-AGCVDILQAD 270 (372)
T ss_dssp HHHHH-HTTCSEEEEC
T ss_pred HHHHH-hCCCCEEecC
Confidence 99998 65 9999983
No 284
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=96.57 E-value=0.017 Score=55.49 Aligned_cols=120 Identities=12% Similarity=0.222 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~ 132 (311)
.+|+++++.|+...+ .||..+-|..|-. +++.-.+.++++|+++ ++++.|-..-+|+. +
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~----~ 247 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWTV----E 247 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSCH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCCH----H
Confidence 689999998887654 6999999975532 3344456677788776 45666766666764 3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDG 210 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adg 210 (311)
+.+++++.+++. +.+| |+. ..+++..+++++.. .+||.+.=.+.+..++.++++. +|.
T Consensus 248 ~Ai~~~~~L~~~-l~~i---------------EeP---~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~di 307 (441)
T 3vc5_A 248 TSIRVGRALDGV-LEYL---------------EDP---TPGIDGMARVAAEV-PMPLATNMCVVTPEHLPAAVERRPIGV 307 (441)
T ss_dssp HHHHHHHHTTTT-CSEE---------------ECC---SSSHHHHHHHHTTS-SSCEEESSSCCSGGGHHHHHHHCCCSE
T ss_pred HHHHHHHHHHHH-HHHh---------------hcc---CCCHHHHHHHHhcC-CCCEEeCCCCCCHHHHHHHHHhCCCCE
Confidence 567888888887 7666 111 13788889999887 6999888788999999988864 777
Q ss_pred EEE
Q psy2386 211 VML 213 (311)
Q Consensus 211 Vmi 213 (311)
|++
T Consensus 308 i~~ 310 (441)
T 3vc5_A 308 LLI 310 (441)
T ss_dssp EEE
T ss_pred Eee
Confidence 776
No 285
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.57 E-value=0.13 Score=44.80 Aligned_cols=129 Identities=13% Similarity=0.108 Sum_probs=83.6
Q ss_pred CeEEEecCCC------HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE
Q psy2386 47 PIAFQVGDNE------PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK 120 (311)
Q Consensus 47 p~~~Ql~g~~------~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK 120 (311)
.+||+.-+.. ++.+.+.|+-+++.|+.+|..| . .+.++++++.+++||.-.
T Consensus 19 ~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~ 75 (232)
T 3igs_A 19 GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE-------------------G----IDNLRMTRSLVSVPIIGI 75 (232)
T ss_dssp CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE-------------------S----HHHHHHHHTTCCSCEEEE
T ss_pred CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC-------------------C----HHHHHHHHHhcCCCEEEE
Confidence 3555444443 8899999999999999999873 1 245788899999998433
Q ss_pred EeccCCCCCc-HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH
Q psy2386 121 HRIGIDDINS-YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK 199 (311)
Q Consensus 121 iR~g~~~~~~-~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~ 199 (311)
.|..+.+.+- .....+-+..+.++|+|.|.+-.... .+ +....++++++++. ++++++ ++.|.+
T Consensus 76 ~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~----~~-------p~~l~~~i~~~~~~--g~~v~~--~v~t~e 140 (232)
T 3igs_A 76 IKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTAR----QR-------PVAVEALLARIHHH--HLLTMA--DCSSVD 140 (232)
T ss_dssp CBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSS----CC-------SSCHHHHHHHHHHT--TCEEEE--ECCSHH
T ss_pred EeecCCCcceEeCccHHHHHHHHHcCCCEEEECcccc----CC-------HHHHHHHHHHHHHC--CCEEEE--eCCCHH
Confidence 3432111000 00013446778899999998754321 00 11234667777653 577665 799999
Q ss_pred HHHHHHhh-cCEEEE
Q psy2386 200 EIDLHLNY-IDGVML 213 (311)
Q Consensus 200 da~~~l~~-adgVmi 213 (311)
++.++.+. +|.|.+
T Consensus 141 ea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 141 DGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHHHHTTCSEEEC
T ss_pred HHHHHHhCCCCEEEE
Confidence 99998876 998864
No 286
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.55 E-value=0.0083 Score=53.92 Aligned_cols=76 Identities=9% Similarity=0.080 Sum_probs=63.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..++++.+++.|+++|.|..-..+++| ..+.+.++++.+ ++||+..+.|.++.++.+..+. ||+|.
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~~f~G------------s~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~Vl 140 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQRRFQG------------SLDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLL 140 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGGGHHH------------HHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEecChhhcCC------------CHHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEE
Confidence 578999999999999998755443444 467889999988 8999999999999999988876 99999
Q ss_pred EehhhhhCCc
Q psy2386 213 LGREAYKNPF 222 (311)
Q Consensus 213 igRa~l~~P~ 222 (311)
++-+.+.+..
T Consensus 141 Li~a~l~~~~ 150 (272)
T 3qja_A 141 LIVAALEQSV 150 (272)
T ss_dssp EEGGGSCHHH
T ss_pred EecccCCHHH
Confidence 9988776443
No 287
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.52 E-value=0.14 Score=45.92 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=73.2
Q ss_pred CCC-eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEe
Q psy2386 45 EHP-IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHR 122 (311)
Q Consensus 45 ~~p-~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR 122 (311)
++| +.+.|.+.+.+++...++.+...|+|.||+=.-+= .. ..+.+.+.+.++.+|+.+ ++|+.+=+|
T Consensus 38 g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l---------~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 38 GAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHF---------AN--VTTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGC---------TT--TTCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccc---------cc--cCcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 344 78999999999999999888878999999953221 00 123477889999999887 799999999
Q ss_pred ccCCCC---CcHHHHHHHHHHHHHcC-CCEEEEec
Q psy2386 123 IGIDDI---NSYDFVRDFVGTVSSAG-CRTFIVHA 153 (311)
Q Consensus 123 ~g~~~~---~~~~~~~e~~~~l~~~G-~~~itvh~ 153 (311)
.-++.+ .+.+...++.+.+.+.| +++|.|--
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl 141 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLEL 141 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEG
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 744322 12335678888888999 99999863
No 288
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.52 E-value=0.0097 Score=53.48 Aligned_cols=74 Identities=7% Similarity=0.078 Sum_probs=61.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..++++.+++.|+++|.|-.-..+++| ..+.+.++++.+ ++||+..+.|.++.++.+.... ||+|.
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~G------------s~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~Vl 147 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQG------------APEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCIL 147 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCC------------CHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCC------------CHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEE
Confidence 578999999999999988643332333 567889999988 8999999999999999998876 99999
Q ss_pred EehhhhhC
Q psy2386 213 LGREAYKN 220 (311)
Q Consensus 213 igRa~l~~ 220 (311)
++-+++.+
T Consensus 148 Li~a~L~~ 155 (272)
T 3tsm_A 148 IIMASVDD 155 (272)
T ss_dssp EETTTSCH
T ss_pred EcccccCH
Confidence 99887753
No 289
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=96.51 E-value=0.026 Score=52.76 Aligned_cols=121 Identities=9% Similarity=0.043 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHHH
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~ 134 (311)
+++.++.++...+.||..+-+..|- +++.-.+.++++|+++ ++.+.|-..-+|+. ++.
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~----~~A 204 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYTV----TEA 204 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCH----HHH
T ss_pred HHHHHHHHHHHHHhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccCH----HHH
Confidence 3444444444456799999887542 3455556788888876 46666666666753 356
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVM 212 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVm 212 (311)
.++++.+++.|+.+|- + ..++-|++..+++++.. ++||.+.-.+.|..|+.++++. +|.|+
T Consensus 205 ~~~~~~l~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ 267 (378)
T 4hpn_A 205 ITLGDRAAGFGIDWFE---------------E-PVVPEQLDAYARVRAGQ-PIPVAGGETWHGRYGMWQALSAGAVDILQ 267 (378)
T ss_dssp HHHHHHHGGGCCSCEE---------------C-CSCTTCHHHHHHHHHHS-SSCEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred HHHHhhhhhcccchhh---------------c-CCCccchhhhHHHHhhC-CceeeCCcCccchHhHHHHHHcCCCCEEe
Confidence 8899999999988771 1 12335899999999998 7999998899999999999975 99887
Q ss_pred Ee
Q psy2386 213 LG 214 (311)
Q Consensus 213 ig 214 (311)
+=
T Consensus 268 ~d 269 (378)
T 4hpn_A 268 PD 269 (378)
T ss_dssp CB
T ss_pred eC
Confidence 64
No 290
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.51 E-value=0.03 Score=48.50 Aligned_cols=138 Identities=12% Similarity=0.183 Sum_probs=87.0
Q ss_pred CCCeEEEecCCC-HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 45 EHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~-~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
+.+++.=+-=.| |+..+.+++.+.++ +|.+.+|..... ...++ -+ + . +.-|++=++.
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~---------~~~~~---~~----~---~--~~~v~vLts~ 107 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGV---------EGSLA---SL----S---Q--RVDLFLVLSM 107 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCT---------TTTHH---HH----H---H--HSEEEEECCC
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCc---------HHHHH---hH----h---c--CCCEEEEEec
Confidence 567777766444 77778788888889 999999943320 11111 01 1 1 1224444443
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCH-HHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-KEID 202 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~-~da~ 202 (311)
...+.. .+....+++...++|++.+++.+. ..+.++++++.+++ .++..+||+.. .+..
T Consensus 108 s~~~~~-~~~v~~~a~~a~~~G~~GvV~sat------------------~~~e~~~ir~~~~~-f~~v~pGI~~~g~~~~ 167 (215)
T 3ve9_A 108 SHPGWN-DAFYPYLREVARRVNPKGFVAPAT------------------RPSMISRVKGDFPD-KLVISPGVGTQGAKPG 167 (215)
T ss_dssp SSTTCC-GGGHHHHHHHHHHHCCSEEECCTT------------------SHHHHHHHHHHCTT-SEEEECCTTSTTCCTT
T ss_pred CCcchH-HHHHHHHHHHHHHcCCCceeeCCC------------------CHHHHHHHHHhCCC-cEEEcCCCCcCcCCHH
Confidence 222110 123567888889999999877543 23567788888877 78888999742 1444
Q ss_pred HHHhh-cCEEEEehhhhhCCcch
Q psy2386 203 LHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 203 ~~l~~-adgVmigRa~l~~P~i~ 224 (311)
+.++. +|.+.+||+++..+...
T Consensus 168 ~a~~~Gad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 168 IALCHGADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HHHHTTCSEEEECHHHHTSSSHH
T ss_pred HHHHcCCCEEEeCHHHcCCCCHH
Confidence 55554 99999999998755443
No 291
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.48 E-value=0.075 Score=46.30 Aligned_cols=142 Identities=12% Similarity=0.098 Sum_probs=80.0
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEecc
Q psy2386 46 HPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIG 124 (311)
Q Consensus 46 ~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g 124 (311)
.+++.=+- ...|+....+++.+.++|+|.|.+|.-+. ++-+...++.+++. +.-|++=....
T Consensus 65 ~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~G----------------~~~l~~~~~~~~~~-g~~v~vLt~~s 127 (228)
T 3m47_A 65 CRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPG----------------ADSVRACLNVAEEM-GREVFLLTEMS 127 (228)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC----------------HHHHHHHHHHHHHH-TCEEEEECCCC
T ss_pred CeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccCC----------------HHHHHHHHHHHHhc-CCCeEEEEeCC
Confidence 45554443 35577777788888889999999994321 23344555555432 33355422221
Q ss_pred CCC-CCcH-HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC-CeEEEecCCCCH-HH
Q psy2386 125 IDD-INSY-DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEIIINGGIKTK-KE 200 (311)
Q Consensus 125 ~~~-~~~~-~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~-ipvi~nGgI~s~-~d 200 (311)
... .+.. +....+++...+.|++.+.+.+.. -+.++++++.+++ .++ ..+||... .+
T Consensus 128 ~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~------------------~~e~~~ir~~~~~~~~i-v~PGI~~~g~~ 188 (228)
T 3m47_A 128 HPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR------------------PERLSRLREIIGQDSFL-ISPGVGAQGGD 188 (228)
T ss_dssp SGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSC------------------HHHHHHHHHHHCSSSEE-EECC-------
T ss_pred CccHHHHHHHHHHHHHHHHHHhCCcEEEECCCC------------------hHHHHHHHHhcCCCCEE-EecCcCcCCCC
Confidence 111 0111 123467778889999998764421 2456777776643 555 66777532 14
Q ss_pred HHHHHhh-cCEEEEehhhhhCCcch
Q psy2386 201 IDLHLNY-IDGVMLGREAYKNPFLM 224 (311)
Q Consensus 201 a~~~l~~-adgVmigRa~l~~P~i~ 224 (311)
. +.++. +|.+.+||+++..+...
T Consensus 189 p-~~~~aGad~iVvGr~I~~a~dp~ 212 (228)
T 3m47_A 189 P-GETLRFADAIIVGRSIYLADNPA 212 (228)
T ss_dssp ---CGGGTCSEEEECHHHHTSSCHH
T ss_pred H-hHHHcCCCEEEECHHHhCCCCHH
Confidence 5 55554 99999999998755443
No 292
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.46 E-value=0.12 Score=46.09 Aligned_cols=97 Identities=11% Similarity=-0.006 Sum_probs=65.8
Q ss_pred EEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccce-eEEEEeccCCC
Q psy2386 49 AFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID-ITVKHRIGIDD 127 (311)
Q Consensus 49 ~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~p-vsvKiR~g~~~ 127 (311)
++-+...|.- .|++++++|+|.|=+ |-...++ .-|+-+.+.-..+.+...+++|++.++.| |.+-+-.|-.
T Consensus 19 i~~~tayD~~----sA~l~e~aG~d~ilv--Gdsl~~~-~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy- 90 (264)
T 1m3u_A 19 FATITAYDYS----FAKLFADEGLNVMLV--GDSLGMT-VQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAY- 90 (264)
T ss_dssp EEEEECCSHH----HHHHHHHHTCCEEEE--CTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSS-
T ss_pred EEEEeCcCHH----HHHHHHHcCCCEEEE--CHHHHHH-HcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCc-
Confidence 3446666654 578888999999966 5544443 23455556666777788888888888754 5555444322
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecC
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHAR 154 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~R 154 (311)
. +.+...+.+.++.++|+++|.+-+.
T Consensus 91 ~-~~~~a~~~a~rl~kaGa~aVklEgg 116 (264)
T 1m3u_A 91 A-TPEQAFENAATVMRAGANMVKIEGG 116 (264)
T ss_dssp S-SHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEECCc
Confidence 2 4456677788899999999998765
No 293
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=96.42 E-value=0.16 Score=45.46 Aligned_cols=119 Identities=10% Similarity=-0.059 Sum_probs=78.0
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEec
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRI 123 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~ 123 (311)
+.| ++-+...|.- .|++++++|+|.| +- |--...+ .-|+-..+.-..+.+...+++|++.+ ..||.+-+-.
T Consensus 28 g~~-i~m~tayDa~----sA~l~e~aG~d~i-lv-GdSl~~~-~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pf 99 (275)
T 3vav_A 28 GEK-IAMLTCYDAS----FAALLDRANVDVQ-LI-GDSLGNV-LQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPF 99 (275)
T ss_dssp TCC-EEEEECCSHH----HHHHHHHTTCSEE-EE-CTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCT
T ss_pred CCc-EEEEeCcCHH----HHHHHHHcCCCEE-EE-CcHHHHH-HcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCC
Confidence 344 3455666654 5788899999999 42 3222222 22344444555677777778888877 4899999998
Q ss_pred c-CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe
Q psy2386 124 G-IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 192 (311)
Q Consensus 124 g-~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n 192 (311)
| + . + .++..+.+.++.++|+++|.+-+... -.+.|+.+.+. .|||.+.
T Consensus 100 gsY-~-s-~~~a~~~a~rl~kaGa~aVklEdg~~----------------~~~~i~~l~~~--GIpv~gH 148 (275)
T 3vav_A 100 GTY-G-T-PADAFASAVKLMRAGAQMVKFEGGEW----------------LAETVRFLVER--AVPVCAH 148 (275)
T ss_dssp TSC-S-S-HHHHHHHHHHHHHTTCSEEEEECCGG----------------GHHHHHHHHHT--TCCEEEE
T ss_pred CCC-C-C-HHHHHHHHHHHHHcCCCEEEECCchh----------------HHHHHHHHHHC--CCCEEEe
Confidence 5 5 2 2 33567778888888999999876531 23567777764 5777764
No 294
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=96.41 E-value=0.034 Score=52.08 Aligned_cols=131 Identities=13% Similarity=0.180 Sum_probs=93.1
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEEEE
Q psy2386 45 EHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsvKi 121 (311)
..|+-..++..+++++++.++...+.||..+-+..|.. +++.-.+.++++++++ ++.+.|-.
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vDa 203 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAADG 203 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEee
Confidence 45677888889999999888888888999999976532 1222234555666544 45666666
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHH
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEI 201 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da 201 (311)
.-+|+. ++...+++.+++.+. ++ ++ |..+++..+++++.. ++||.+-=.+.+..|+
T Consensus 204 N~~~~~----~~A~~~~~~l~~~~~-~i---------------Ee---P~~~~~~~~~l~~~~-~~pia~dE~~~~~~~~ 259 (376)
T 4h2h_A 204 NRGWTT----RDALRFSRECPDIPF-VM---------------EQ---PCNSFEDLEAIRPLC-HHALYMDEDGTSLNTV 259 (376)
T ss_dssp TTCCCH----HHHHHHHHHCTTSCE-EE---------------ES---CSSSHHHHHHHGGGC-CSCEEESTTCCSHHHH
T ss_pred ccCCCH----HHHHHHHHHHhhccc-cc---------------cC---CcchhhhHhhhhhcc-cCccccCcccCCHHHH
Confidence 666653 356778887776653 22 11 113678888999987 7999888899999999
Q ss_pred HHHHhh--cCEEEEe
Q psy2386 202 DLHLNY--IDGVMLG 214 (311)
Q Consensus 202 ~~~l~~--adgVmig 214 (311)
.++++. +|.|++=
T Consensus 260 ~~~~~~~~~d~v~~d 274 (376)
T 4h2h_A 260 ITAAATSLVDGFGMK 274 (376)
T ss_dssp HHHHHTTCCSEECCB
T ss_pred HHHHHhhccCccccc
Confidence 999975 8988774
No 295
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.40 E-value=0.072 Score=46.49 Aligned_cols=134 Identities=10% Similarity=0.143 Sum_probs=84.8
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
.+.++.++- ++++. ++.+++.+.|.|.|| | -.+|+.+ +.+++..++||.=-+|+..
T Consensus 71 ~~~~v~v~v-~~~ei---~~~i~~~~ld~vQLH-------------G---~E~~~~~----~~l~~~~~~~viKa~~v~~ 126 (228)
T 4aaj_A 71 PVFLVSTMV-GFSEW---AMAIERTGAQYIQVH-------------S---NALPQTI----DTLKKEFGVFVMKAFRVPT 126 (228)
T ss_dssp CEEEEECCC-CHHHH---HHHHHHHTCSEEEEC-------------S---CCCHHHH----HHHHHHHCCEEEEEEECCS
T ss_pred CCEEEeccC-chHHH---HHHHHhccchheecc-------------c---ccCHHHH----HHHhhccCceEEEEEEecc
Confidence 345666654 46554 445667889999998 1 1345554 4455556778754466643
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHH
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL 205 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l 205 (311)
......++...+...+....+|++.+... |-+|+ ..||+++..+... .|++..||++ ++.+.+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~d~~LlDs~-----GGtG~------~fDW~~~~~~~~~---~p~iLAGGL~-peNV~~Ai 191 (228)
T 4aaj_A 127 ISKNPEEDANRLLSEISRYNADMVLLDTG-----AGSGK------LHDLRVSSLVARK---IPVIVAGGLN-AENVEEVI 191 (228)
T ss_dssp SCSCHHHHHHHHHHHHHHSCCSEEEEEC------------------CCCHHHHHHHHH---SCEEEESSCC-TTTHHHHH
T ss_pred cccchhhhHHHHHHHHhccCCCEEccCCC-----CCCcC------cCChHHHHHhhhc---CCeEEECCCC-HHHHHHHH
Confidence 33322223344555666778999988632 22232 3699998887664 6899999995 67777777
Q ss_pred hh--cCEEEEehhhh
Q psy2386 206 NY--IDGVMLGREAY 218 (311)
Q Consensus 206 ~~--adgVmigRa~l 218 (311)
+. ..||=+.+|.=
T Consensus 192 ~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 192 KVVKPYGVDVSSGVE 206 (228)
T ss_dssp HHHCCSEEEESGGGE
T ss_pred HHhCCCEEEeCCCCC
Confidence 64 88999988874
No 296
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.36 E-value=0.11 Score=46.50 Aligned_cols=97 Identities=11% Similarity=0.016 Sum_probs=64.9
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccce-eEEEEeccCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEID-ITVKHRIGIDDI 128 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~p-vsvKiR~g~~~~ 128 (311)
+-+...|.- .|++++++|+|.| + .|--..++ .-|+-..+.-..+.+...+++|++.++.| |.+-+-.|-. .
T Consensus 20 ~~~tayDa~----sA~l~e~aG~d~i-l-vGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy-~ 91 (275)
T 1o66_A 20 AMLTAYESS----FAALMDDAGVEML-L-VGDSLGMA-VQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAY-Q 91 (275)
T ss_dssp EEEECCSHH----HHHHHHHTTCCEE-E-ECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSS-S
T ss_pred EEEeCcCHH----HHHHHHHcCCCEE-E-ECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCc-c
Confidence 446666654 5788889999999 4 35444433 23455556667788888888888888754 5555443221 1
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEecC
Q psy2386 129 NSYDFVRDFVGTVSSAGCRTFIVHAR 154 (311)
Q Consensus 129 ~~~~~~~e~~~~l~~~G~~~itvh~R 154 (311)
.+.+...+-+.++.++|+++|.+-+.
T Consensus 92 ~s~~~a~~na~rl~kaGa~aVklEdg 117 (275)
T 1o66_A 92 QSKEQAFAAAAELMAAGAHMVKLEGG 117 (275)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCc
Confidence 23445677778888999999998765
No 297
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=96.36 E-value=0.022 Score=51.06 Aligned_cols=111 Identities=12% Similarity=0.179 Sum_probs=76.2
Q ss_pred CCCCeEEEec-C--CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE
Q psy2386 44 EEHPIAFQVG-D--NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK 120 (311)
Q Consensus 44 ~~~p~~~Ql~-g--~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK 120 (311)
...|+++-+= | .+|++..+.|.++.+.|+++|.|--| ....+.++++++. ++||.--
T Consensus 89 ~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg-------------------~~~~~~i~~l~~~-GIpv~gH 148 (275)
T 3vav_A 89 PRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGG-------------------EWLAETVRFLVER-AVPVCAH 148 (275)
T ss_dssp CSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECC-------------------GGGHHHHHHHHHT-TCCEEEE
T ss_pred CCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCc-------------------hhHHHHHHHHHHC-CCCEEEe
Confidence 3467888774 3 48888887777776679999999622 1235566666653 7888643
Q ss_pred Eec---------cC----CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCC
Q psy2386 121 HRI---------GI----DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPEL 187 (311)
Q Consensus 121 iR~---------g~----~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~i 187 (311)
+.+ |+ ..+...+++++-++.++++|++.|.+.+-. + +.+++|.+.+ ++
T Consensus 149 lgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~vp-----------------~-~~a~~It~~l-~i 209 (275)
T 3vav_A 149 VGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAVP-----------------T-LVAAEVTREL-SI 209 (275)
T ss_dssp EESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESCC-----------------H-HHHHHHHHHC-SS
T ss_pred cCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecCCC-----------------H-HHHHHHHHhC-CC
Confidence 321 11 111123567888999999999999887553 2 4788999998 79
Q ss_pred eEEEec
Q psy2386 188 EIIING 193 (311)
Q Consensus 188 pvi~nG 193 (311)
|+|+-|
T Consensus 210 P~igIG 215 (275)
T 3vav_A 210 PTIGIG 215 (275)
T ss_dssp CEEEES
T ss_pred CEEEEc
Confidence 999876
No 298
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.34 E-value=0.043 Score=49.59 Aligned_cols=127 Identities=11% Similarity=0.032 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-+.+.-.++++.+.+.+ .+||.+-+-. . +.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~----------GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 82 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPC----------GTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS--N---STA 82 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETT----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--c---cHH
Confidence 377889999998888999999876 2234444445555567777776655 4788775432 2 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE-e-----cCCCCHHHHHHHHh
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-N-----GGIKTKKEIDLHLN 206 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~-n-----GgI~s~~da~~~l~ 206 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.+++++++ ++||+. | |---+++.+.++.+
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 83 EAIAFVRHAQNAGADGVLIVSPY--YNKPT-------QEGIYQHFKAIDAAS-TIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 67899999999999999876442 11110 001245566777777 688764 3 43356777776654
No 299
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=96.32 E-value=0.024 Score=52.41 Aligned_cols=131 Identities=12% Similarity=0.226 Sum_probs=94.3
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDIN 129 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~ 129 (311)
..+...+|+++++.++...+ ||..+-+..|-. . -.+.++++|+..+..+.|-..-+|++
T Consensus 128 ~~~~~~~~e~~~~~a~~~~~-g~~~~K~Kvg~~--------------~----d~~~v~avR~~~~~~l~vDaN~~~t~-- 186 (338)
T 3ijl_A 128 FTIGIDTPDVVRAKTKECAG-LFNILKVKLGRD--------------N----DKEMIETIRSVTDLPIAVDANQGWKD-- 186 (338)
T ss_dssp CBCCCCCHHHHHHHHHHHHT-TCSSEEEECSSS--------------C----HHHHHHHHHTTCCCCEEEECTTCCCC--
T ss_pred EEEeCCCHHHHHHHHHHHHh-cccEEEEecCcH--------------H----HHHHHHHHHhhcCCcEEEECcCCCCC--
Confidence 34566789999988887665 899999876531 1 23567888888776666666666631
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhcC
Q psy2386 130 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYID 209 (311)
Q Consensus 130 ~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ad 209 (311)
.++..++++.+++.++.+|- + ..++-|++..+++++.. .+||.+.=.+.+..|+.+++..+|
T Consensus 187 -~~~A~~~~~~l~~~~i~~iE---------------e-P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~~a~d 248 (338)
T 3ijl_A 187 -RQYALDMIHWLKEKGIVMIE---------------Q-PMPKEQLDDIAWVTQQS-PLPVFADESLQRLGDVAALKGAFT 248 (338)
T ss_dssp -HHHHHHHHHHHHHTTEEEEE---------------C-CSCTTCHHHHHHHHHTC-SSCEEESTTCCSGGGTGGGBTTBS
T ss_pred -HHHHHHHHHHHhhCCCCEEE---------------C-CCCCCcHHHHHHHHhcC-CCCEEECCCCCCHHHHHHHHhhCC
Confidence 23568999999998877661 1 12335789999999988 699999889999999888764499
Q ss_pred EEEEehhhhh
Q psy2386 210 GVMLGREAYK 219 (311)
Q Consensus 210 gVmigRa~l~ 219 (311)
.|++==+-.+
T Consensus 249 ~i~~k~~~~G 258 (338)
T 3ijl_A 249 GINIKLMKCT 258 (338)
T ss_dssp EEEECHHHHT
T ss_pred EEEecccccC
Confidence 8886433333
No 300
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.29 E-value=0.0019 Score=60.98 Aligned_cols=44 Identities=16% Similarity=0.342 Sum_probs=38.2
Q ss_pred CCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 169 IPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 169 ~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmig 214 (311)
.+..+|+.|+++++.+ ++||+.-| |.++++++.+.+. +|+|.++
T Consensus 209 ~p~~~~~~i~~i~~~~-~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 209 DASFNWEALRWLRDLW-PHKLLVKG-LLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CTTCCHHHHHHHHHHC-CSEEEEEE-ECCHHHHHHHHHTTCSEEEEC
T ss_pred CccccHHHHHHHHHhc-CCCEEEEe-cCcHHHHHHHHHcCCCEEEEc
Confidence 3457899999999998 79998764 8999999999987 9999993
No 301
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.23 E-value=0.044 Score=47.53 Aligned_cols=132 Identities=16% Similarity=0.186 Sum_probs=84.8
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEecc--CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNC--GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~--gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
..++.+|...|...+.+.++.+.+.|+|.|.+-. |.-.++ + ..-.++++++++.++.|+.|-+=+
T Consensus 7 ~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~---------~----~~~~~~~~~lr~~~~~~~~v~lmv 73 (228)
T 1h1y_A 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPN---------L----TIGAPVIQSLRKHTKAYLDCHLMV 73 (228)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC---------B----CBCHHHHHHHHTTCCSEEEEEEES
T ss_pred CeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcc---------h----hhCHHHHHHHHhhcCCcEEEEEEe
Confidence 4478899999999999999999999999876653 211111 1 111266677777766677655544
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc-HHHHHHHHHhCCCCeEEEecCCCC-HHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNLKKDFPELEIIINGGIKT-KKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~-~~~i~~i~~~~~~ipvi~nGgI~s-~~da 201 (311)
++. .++++.+.++|+|.|++|+-.. +.. .+.++++++. ++.++..=.-.| .+.+
T Consensus 74 --~d~------~~~i~~~~~agad~v~vH~~~~--------------~~~~~~~~~~i~~~--g~~igv~~~p~t~~e~~ 129 (228)
T 1h1y_A 74 --TNP------SDYVEPLAKAGASGFTFHIEVS--------------RDNWQELIQSIKAK--GMRPGVSLRPGTPVEEV 129 (228)
T ss_dssp --SCG------GGGHHHHHHHTCSEEEEEGGGC--------------TTTHHHHHHHHHHT--TCEEEEEECTTSCGGGG
T ss_pred --cCH------HHHHHHHHHcCCCEEEECCCCc--------------ccHHHHHHHHHHHc--CCCEEEEEeCCCCHHHH
Confidence 221 2356666779999999997642 123 3567777664 455543333334 3455
Q ss_pred HHHHh---hcCEEEEe
Q psy2386 202 DLHLN---YIDGVMLG 214 (311)
Q Consensus 202 ~~~l~---~adgVmig 214 (311)
..++. .+|.|.++
T Consensus 130 ~~~~~~~~~~d~vl~~ 145 (228)
T 1h1y_A 130 FPLVEAENPVELVLVM 145 (228)
T ss_dssp HHHHHSSSCCSEEEEE
T ss_pred HHHHhcCCCCCEEEEE
Confidence 66667 69999885
No 302
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.19 E-value=0.067 Score=49.33 Aligned_cols=127 Identities=9% Similarity=0.035 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +.-|-+..-+.+.-.++++.+++.+ .+||.+-+-. . +.+
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~----------GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~--~---st~ 116 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGIL----------GSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA--L---RTD 116 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEES----------STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 478889999998888999999887 2233344345555567777776655 4788875432 2 233
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHHHHh
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDLHLN 206 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~~l~ 206 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.++|++++ ++||+ +| .|+ -+++.+.++.+
T Consensus 117 eai~la~~A~~~Gadavlv~~P~--Y~~~s-------~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 117 EAVALAKDAEAAGADALLLAPVS--YTPLT-------QEEAYHHFAAVAGAT-ALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCC--SSCCC-------HHHHHHHHHHHHHHC-SSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 67899999999999999876432 11111 001245677888887 68875 45 243 57777777754
No 303
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.14 E-value=0.065 Score=48.56 Aligned_cols=127 Identities=11% Similarity=0.033 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-..+.-.++++.+++.+ .+||.+-+- -. +.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~----------GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg--~~---~t~ 82 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPV----------GTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG--SN---NPV 82 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECS----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC--CS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC--CC---CHH
Confidence 478889999998888999999886 2233343345555566777766655 478877443 22 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHHh
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHLN 206 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l~ 206 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.+++++++ ++||+ +| |---+++.+.++.+
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 83 EAVRYAQHAQQAGADAVLCVAGY--YNRPS-------QEGLYQHFKMVHDAI-DIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCT--TTCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 67899999999999999886432 11111 001245677788887 68875 55 43457777777653
No 304
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.14 E-value=0.024 Score=50.91 Aligned_cols=94 Identities=13% Similarity=0.244 Sum_probs=61.7
Q ss_pred HHHHHHHhcccc--ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHH-HHHH
Q psy2386 103 SDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN-FVYN 179 (311)
Q Consensus 103 ~~iv~~v~~~~~--~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~-~i~~ 179 (311)
.+-++++++..+ .++.+-+.. + +-++.+.++|+|+|-++.-+ +.+.. .++.
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~t----------l-ee~~~A~~aGaD~I~ld~~~---------------~~~l~~~v~~ 222 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECES----------F-EEAKNAMNAGADIVMCDNLS---------------VLETKEIAAY 222 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEESS----------H-HHHHHHHHHTCSEEEEETCC---------------HHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEcCC----------H-HHHHHHHHcCCCEEEECCCC---------------HHHHHHHHHH
Confidence 455666777654 244442221 1 22444457899999887421 11222 2333
Q ss_pred HHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcc
Q psy2386 180 LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 180 i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i 223 (311)
+...+|++||.++||| +++.+.++.+. +|++.+|+....-|++
T Consensus 223 l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 223 RDAHYPFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQATFI 266 (273)
T ss_dssp HHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCCCC
T ss_pred hhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCCCC
Confidence 4444567999999999 89999999987 9999999998776653
No 305
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.14 E-value=0.047 Score=49.93 Aligned_cols=124 Identities=11% Similarity=0.079 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-+.+.-.++++.+++.+ .+||.+-+- - . .+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~----------GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg--~-s---t~ 93 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPN----------GNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG--Y-S---VD 93 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTT----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--S-S---HH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEC----------cccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC--c-C---HH
Confidence 478889999999889999998776 2233343345555566777776655 478877543 2 2 23
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee--cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN--GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n--GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.++|++++ ++||+ +| |- -+++.+.++.
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~tg~-l~~~~~~~La 158 (314)
T 3d0c_A 94 TAIELGKSAIDSGADCVMIHQPV--HPYIT-------DAGAVEYYRNIIEAL-DAPSIIYFKDAH-LSDDVIKELA 158 (314)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCC--CSCCC-------HHHHHHHHHHHHHHS-SSCEEEEECCTT-SCTHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCCCC-cCHHHHHHHH
Confidence 67899999999999999886442 11111 001246677888887 69975 45 43 6778777765
No 306
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.13 E-value=0.015 Score=56.63 Aligned_cols=67 Identities=18% Similarity=0.311 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
.+.++.+.++|+|.|.++.... .+ ..-++.++++++.+|++||++ |++.++++++++.+. ||+|.+
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g----~~--------~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG----HS--------EGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT----TS--------HHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhccCceEEeccccc----cc--------hHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCCCEEEE
Confidence 5788999999999999985532 10 124688999999988899988 889999999999987 999998
Q ss_pred e
Q psy2386 214 G 214 (311)
Q Consensus 214 g 214 (311)
|
T Consensus 300 g 300 (496)
T 4fxs_A 300 G 300 (496)
T ss_dssp C
T ss_pred C
Confidence 6
No 307
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.13 E-value=0.047 Score=49.64 Aligned_cols=126 Identities=10% Similarity=0.014 Sum_probs=81.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-+.+.-.++++.+++.+ .+||.+-+- -. +.+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg--~~---~t~ 94 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGG----------TTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG--SN---NTH 94 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC--CS---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC--CC---CHH
Confidence 4788899999998899999998872 233343345555567777776655 478876443 22 233
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.++|++++ ++||+ +| |---+++.+.++.
T Consensus 95 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 95 ASIDLTKKATEVGVDAVMLVAPY--YNKPS-------QEGMYQHFKAIAEST-PLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHH
Confidence 67899999999999999876432 11111 001245666777777 68864 45 3335677776664
No 308
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.10 E-value=0.015 Score=56.55 Aligned_cols=68 Identities=22% Similarity=0.300 Sum_probs=55.6
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..+.++.+.++|+|.|.++.... .+ +..++.++++++.+|++||++ |++.|+++++++.+. ||+|.
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g----~~--------~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~ 296 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHG----HS--------KGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGADAVK 296 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCC----SB--------HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEE
T ss_pred hHHHHHHHhhcccceEEecccCC----cc--------hhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCCCEEE
Confidence 46788999999999999985532 11 124688999999987889887 889999999999987 99999
Q ss_pred Ee
Q psy2386 213 LG 214 (311)
Q Consensus 213 ig 214 (311)
+|
T Consensus 297 vg 298 (490)
T 4avf_A 297 VG 298 (490)
T ss_dssp EC
T ss_pred EC
Confidence 95
No 309
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.08 E-value=0.04 Score=50.24 Aligned_cols=166 Identities=10% Similarity=0.072 Sum_probs=96.8
Q ss_pred EEEecCCCHHHHHHHHHHHHHcCCCEEEecc-CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCC
Q psy2386 49 AFQVGDNEPKKLAKSAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD 127 (311)
Q Consensus 49 ~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~-gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~ 127 (311)
++=+...|.- .|++++++|||.|=+-- +.- .+. |+-....-..+.+...+++|.+.++.||.+-+-.|+-+
T Consensus 31 i~~~~ayD~~----sA~l~e~aG~dai~vs~~s~a--~~~--G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~ 102 (305)
T 3ih1_A 31 LQIPGAHDAM----AALVARNTGFLALYLSGAAYT--ASK--GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGG 102 (305)
T ss_dssp EEEEBCSSHH----HHHHHHHTTCSCEEECHHHHH--HHH--TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSS
T ss_pred EEEecCcCHH----HHHHHHHcCCCEEEECcHHHH--HhC--CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 3445566665 57788899999988862 111 111 33333344566677777888787899999999998743
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCcc-ccccCCCCcCCCCCcCcH----HHHHHHHHhCCCCeEEEecCCCC---HH
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNA-FLKKLNPKQNRKIPILKY----NFVYNLKKDFPELEIIINGGIKT---KK 199 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~-~~~G~~g~~~~~~~~~~~----~~i~~i~~~~~~ipvi~nGgI~s---~~ 199 (311)
.+...+.++.++++|+++|.+-+... ..-|..+.. ...+. +.|+.++++-+++.|++--|-.. .+
T Consensus 103 ---~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk----~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~ 175 (305)
T 3ih1_A 103 ---VLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGK----KLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLD 175 (305)
T ss_dssp ---HHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCC----CBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHH
T ss_pred ---HHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCC----cccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHH
Confidence 23567889999999999999987642 011211110 11222 34444555533444555545431 22
Q ss_pred H----HHHHHhh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 200 E----IDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 200 d----a~~~l~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+ ++.+.+. ||+|++= + ..++..++++.+.+
T Consensus 176 ~ai~Ra~ay~eAGAD~i~~e-~-~~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 176 EAIERANAYVKAGADAIFPE-A-LQSEEEFRLFNSKV 210 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEET-T-CCSHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCEEEEc-C-CCCHHHHHHHHHHc
Confidence 2 3333333 9999992 1 23445566665543
No 310
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.03 E-value=0.042 Score=50.30 Aligned_cols=85 Identities=12% Similarity=-0.032 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+++.+ .+||.+-+ |-. +.+
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g~~---~t~ 106 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLG----------STGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV--SDL---TTA 106 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHH
Confidence 4788899999999899999998872 233333344555566777776655 57888743 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecC
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHAR 154 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~R 154 (311)
+.+++++.+++.|+|++.+..-
T Consensus 107 ~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 107 KTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEECCC
Confidence 6889999999999999988643
No 311
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.03 E-value=0.056 Score=48.97 Aligned_cols=126 Identities=13% Similarity=0.010 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |-. +.+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~ 89 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVG----------TTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT--GAN---NTV 89 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCc---CHH
Confidence 4788899999988899999998872 223333334555566777766655 47887743 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.+++++++ ++||+ +| |---+++.+.++.
T Consensus 90 ~ai~la~~a~~~Gadavlv~~P~--y~~~~-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 90 EAIALSQAAEKAGADYTLSVVPY--YNKPS-------QEGIYQHFKTIAEAT-SIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEECCchhccCCCHHHHHHHH
Confidence 68899999999999999876432 11110 001245666777776 67764 44 3334566665553
No 312
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.02 E-value=0.1 Score=45.23 Aligned_cols=140 Identities=8% Similarity=0.102 Sum_probs=83.8
Q ss_pred CC-CeEEEecCCC-HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 45 EH-PIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 45 ~~-p~~~Ql~g~~-~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
+. +++.=+-=.| |+..+.+++.+.++ |.+.+|..... ++-+...++...+. +.-|+|=.+
T Consensus 52 ~~~~VflDlK~~DI~nTv~~~~~~~~~~--d~vTVh~~~G~---------------~~~~~~a~~~~~~~-~~~v~vLts 113 (222)
T 4dbe_A 52 DVEEIIVDFKLADIGYIMKSIVERLSFA--NSFIAHSFIGV---------------KGSLDELKRYLDAN-SKNLYLVAV 113 (222)
T ss_dssp CCSEEEEEEEECSCHHHHHHHHTTCTTC--SEEEEESTTCT---------------TTTHHHHHHHHHHT-TCEEEEEEE
T ss_pred CCCeEEEEeeecchHHHHHHHHHHHHhC--CEEEEEcCcCc---------------HHHHHHHHHHHHhc-CCcEEEEEe
Confidence 45 7777765444 56666666666555 99999843220 11233334443332 334555444
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH-HH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK-EI 201 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~-da 201 (311)
....+.... ....+++...++|++.+++.+.. -+.++.+++.+++ .++..+||+... +.
T Consensus 114 ~s~~~~~~~-~~~~~a~~a~~~g~~GvV~sat~------------------p~e~~~ir~~~~~-~~~vtPGI~~~g~tp 173 (222)
T 4dbe_A 114 MSHEGWSTL-FADYIKNVIREISPKGIVVGGTK------------------LDHITQYRRDFEK-MTIVSPGMGSQGGSY 173 (222)
T ss_dssp CSSTTCCCT-THHHHHHHHHHHCCSEEEECTTC------------------HHHHHHHHHHCTT-CEEEECCBSTTSBCT
T ss_pred CCCcchHHH-HHHHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHhCCC-CEEEcCCcccCccCH
Confidence 432221111 23578888899999999875532 1457778887766 677888887321 23
Q ss_pred HHHHhh-cCEEEEehhhhhCCc
Q psy2386 202 DLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 202 ~~~l~~-adgVmigRa~l~~P~ 222 (311)
.+.++. +|.+.|||+++.-+.
T Consensus 174 ~~a~~~Gad~iVVGR~I~~A~d 195 (222)
T 4dbe_A 174 GDAVCAGADYEIIGRSIYNAGN 195 (222)
T ss_dssp THHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHcCCCEEEECHHhcCCCC
Confidence 333444 999999999977544
No 313
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.99 E-value=0.052 Score=49.66 Aligned_cols=127 Identities=14% Similarity=0.070 Sum_probs=78.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
.=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |.. +.
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g~~---st 104 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVG----------TTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT--GAN---ST 104 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCc---CH
Confidence 34788899999988889999998872 233333344555566676666655 47887743 322 23
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
.+.+++++.+++.|+|++.+..-. +...+ ...-+++.+++.+++ ++||+ +| |---+++.+.++.
T Consensus 105 ~eai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 105 REAVALTEAAKSGGADACLLVTPY--YNKPT-------QEGMYQHFRHIAEAV-AIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHS-CSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHh
Confidence 468899999999999999876432 11100 001245566666666 57764 33 3334555555543
No 314
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.98 E-value=0.061 Score=48.69 Aligned_cols=127 Identities=13% Similarity=0.071 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+++|=++ +..|-+..-..+.-.++++.+.+.+ .+||.+-+-. . +.+
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~----------GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~---~t~ 85 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLF----------GTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV--D---SIE 85 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEES----------STTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--c---cHH
Confidence 478889999998889999999887 2234444445555577778777766 4788775432 2 233
Q ss_pred HHHHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHHhCC--CCeEE-Ee----cCC-CCHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKKDFP--ELEII-IN----GGI-KTKKEIDL 203 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~~~~--~ipvi-~n----GgI-~s~~da~~ 203 (311)
+.+++++.+++.|+|++.+..-. +.. .+ ...-+++.+++++++| ++||+ +| .|+ -+++.+.+
T Consensus 86 ~ai~la~~A~~~Gadavlv~~P~--y~~~~s-------~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~ 156 (294)
T 3b4u_A 86 DAADQSAEALNAGARNILLAPPS--YFKNVS-------DDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGR 156 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCC--SSCSCC-------HHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCc--CCCCCC-------HHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHH
Confidence 67899999999999999886432 111 11 0012456667777764 68864 45 233 56777776
Q ss_pred HH
Q psy2386 204 HL 205 (311)
Q Consensus 204 ~l 205 (311)
+.
T Consensus 157 La 158 (294)
T 3b4u_A 157 LK 158 (294)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 315
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.97 E-value=0.05 Score=47.13 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=69.7
Q ss_pred ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 115 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 115 ~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
.|+..=+|.. +. ++..++++.+.+.|+..|-|.-|+. .-.+.|+++++.+|+ ++|+.|-
T Consensus 13 ~~vi~Vir~~-~~----~~a~~~a~al~~gGi~~iEvt~~t~---------------~a~~~I~~l~~~~p~-~~IGAGT 71 (217)
T 3lab_A 13 KPLIPVIVID-DL----VHAIPMAKALVAGGVHLLEVTLRTE---------------AGLAAISAIKKAVPE-AIVGAGT 71 (217)
T ss_dssp CSEEEEECCS-CG----GGHHHHHHHHHHTTCCEEEEETTST---------------THHHHHHHHHHHCTT-SEEEEEC
T ss_pred CCEEEEEEcC-CH----HHHHHHHHHHHHcCCCEEEEeCCCc---------------cHHHHHHHHHHHCCC-CeEeecc
Confidence 4666667752 21 2578999999999999999987763 346889999999965 8999999
Q ss_pred CCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHh
Q psy2386 195 IKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 195 I~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~ 229 (311)
|.|.+++++.++. |+.++.= + -+|.+.+..++
T Consensus 72 Vlt~~~a~~ai~AGA~fivsP-~--~~~evi~~~~~ 104 (217)
T 3lab_A 72 VCTADDFQKAIDAGAQFIVSP-G--LTPELIEKAKQ 104 (217)
T ss_dssp CCSHHHHHHHHHHTCSEEEES-S--CCHHHHHHHHH
T ss_pred ccCHHHHHHHHHcCCCEEEeC-C--CcHHHHHHHHH
Confidence 9999999999987 9998761 1 35555554443
No 316
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=95.97 E-value=0.046 Score=49.64 Aligned_cols=91 Identities=11% Similarity=0.088 Sum_probs=62.7
Q ss_pred HHHHHHHHhccccc-eeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHH
Q psy2386 102 VSDCIKAMRDSVEI-DITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNL 180 (311)
Q Consensus 102 ~~~iv~~v~~~~~~-pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i 180 (311)
+.+-++++++..+. ++.|-+.. + +-++.+.++|+|+|-++.- +.+.++++
T Consensus 195 i~~ai~~~r~~~~~~kI~vev~t----------l-ee~~eA~~aGaD~I~ld~~------------------~~e~l~~~ 245 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVEN----------L-DELDDALKAGADIIMLDNF------------------NTDQMREA 245 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESS----------H-HHHHHHHHTTCSEEEESSC------------------CHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEeCC----------H-HHHHHHHHcCCCEEEECCC------------------CHHHHHHH
Confidence 34556666665532 34442221 2 2344556889999988642 34666666
Q ss_pred HHhC-CCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 181 KKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 181 ~~~~-~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
++.+ ++++|.++||| +++.+.++.+. +|++.+|+....-|+
T Consensus 246 v~~~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a~~ 288 (296)
T 1qap_A 246 VKRVNGQARLEVSGNV-TAETLREFAETGVDFISVGALTKHVRA 288 (296)
T ss_dssp HHTTCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHHHEEEC
T ss_pred HHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCC
Confidence 6655 25999999999 99999999987 999999997665554
No 317
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.96 E-value=0.24 Score=43.20 Aligned_cols=137 Identities=12% Similarity=0.213 Sum_probs=79.0
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cc--e--eEEEE
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EI--D--ITVKH 121 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~--p--vsvKi 121 (311)
+=+-++ ..|+....+++.+.++|+|.|-+|.-.. .+.+...++.+++.. +. | +.|-.
T Consensus 59 lD~kl~-Dip~t~~~~~~~~~~~Gad~vtvH~~~g----------------~~~l~~~~~~~~~~~~~g~~~~~~~~V~~ 121 (239)
T 1dbt_A 59 LDLKLH-DIPTTVNKAMKRLASLGVDLVNVHAAGG----------------KKMMQAALEGLEEGTPAGKKRPSLIAVTQ 121 (239)
T ss_dssp EEEEEC-SCHHHHHHHHHHHHTTTCSEEEEEGGGC----------------HHHHHHHHHHHHHHSCTTSCCCEEEEECS
T ss_pred EEeccc-cchHHHHHHHHHHHhcCCCEEEEeCcCC----------------HHHHHHHHHHHHhhhccCCCCccEEEEEE
Confidence 335565 7788888788888899999999994221 123445566665531 33 4 44433
Q ss_pred eccCCC----------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE
Q psy2386 122 RIGIDD----------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 191 (311)
Q Consensus 122 R~g~~~----------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~ 191 (311)
....+. .+..+....++....+.|.+.+.... +.++++++..++.+++.
T Consensus 122 ~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~---------------------~~i~~lr~~~~~~~i~v 180 (239)
T 1dbt_A 122 LTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV---------------------HEAKAIYQAVSPSFLTV 180 (239)
T ss_dssp CTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG---------------------GGHHHHTTTSCTTCEEE
T ss_pred cCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH---------------------HHHHHHHHhcCCCcEEE
Confidence 332210 01011112222223456776654432 22556666654468999
Q ss_pred ecCCCCHHH----------HHHHHhh-cCEEEEehhhhhCCc
Q psy2386 192 NGGIKTKKE----------IDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 192 nGgI~s~~d----------a~~~l~~-adgVmigRa~l~~P~ 222 (311)
.|||+.-.. ..++++. +|.+.+||+++..|.
T Consensus 181 ~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 181 TPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAED 222 (239)
T ss_dssp ECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSC
T ss_pred eCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCC
Confidence 999975322 1445554 999999999987655
No 318
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=95.95 E-value=0.023 Score=55.97 Aligned_cols=83 Identities=16% Similarity=0.080 Sum_probs=57.9
Q ss_pred HHHHHHHcC---CCEEEEecCccccccCCCCcCCCC-CcCcHHHHHHHHHhC-----CCCeEEEecCCCCHHHHHHHHh-
Q psy2386 137 FVGTVSSAG---CRTFIVHARNAFLKKLNPKQNRKI-PILKYNFVYNLKKDF-----PELEIIINGGIKTKKEIDLHLN- 206 (311)
Q Consensus 137 ~~~~l~~~G---~~~itvh~Rt~~~~G~~g~~~~~~-~~~~~~~i~~i~~~~-----~~ipvi~nGgI~s~~da~~~l~- 206 (311)
-+..+.+.| +|+|.+.+-... .+ ++. .. ++..++.++++++.+ .++||++-||| +++++.++++
T Consensus 120 ea~~A~~~G~~~aDYv~~Gpvf~T---~t-K~~-~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~ 193 (540)
T 3nl6_A 120 EVDELSKMGPDMVDYIGVGTLFPT---LT-KKN-PKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQ 193 (540)
T ss_dssp HHHHHHHTCC--CCEEEESCCSCC---CC-CC-----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEcCCCCC---CC-CCC-cCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHh
Confidence 356677889 999988433211 01 111 11 345688888777652 27999999999 7899999986
Q ss_pred -------h-cCEEEEehhhhhCCcchH
Q psy2386 207 -------Y-IDGVMLGREAYKNPFLMS 225 (311)
Q Consensus 207 -------~-adgVmigRa~l~~P~i~~ 225 (311)
. +|||.++++++..+....
T Consensus 194 ~~~~g~~~GadgvAVvsaI~~a~dp~~ 220 (540)
T 3nl6_A 194 CVSSNGKRSLDGICVVSDIIASLDAAK 220 (540)
T ss_dssp CBCTTSSCBCSCEEESHHHHTCTTHHH
T ss_pred hcccccccCceEEEEeHHHhcCCCHHH
Confidence 4 999999999998666443
No 319
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.93 E-value=0.049 Score=49.83 Aligned_cols=126 Identities=9% Similarity=0.038 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-..+.-.++++.+.+.+ .+||.+-+ |- +.+
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~----------GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g~----~t~ 93 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPC----------GNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--GY----ATS 93 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTT----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CS----SHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeC----------ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--Cc----CHH
Confidence 478889999999889999999876 2233333344555566777766655 47888865 41 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-cCCCCHHHHHHHHh
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-GGIKTKKEIDLHLN 206 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-GgI~s~~da~~~l~ 206 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.++|.+++ ++||+ +| |--.+++.+.++.+
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~g~~l~~~~~~~La~ 159 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIHMPI--HPYVT-------AGGVYAYFRDIIEAL-DFPSLVYFKDPEISDRVLVDLAP 159 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCC--CSCCC-------HHHHHHHHHHHHHHH-TSCEEEEECCTTSCTHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHc
Confidence 67899999999999999876332 11111 011246677888887 68875 67 65667777777653
No 320
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.93 E-value=0.052 Score=49.44 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+++|=++ +..|-+..-+.+.-.++++.+++.+ .+||.+-+- -. +.+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~----------GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg--~~---st~ 94 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVL----------GTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG--TN---STE 94 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEES----------SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC--CS---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeC----------ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC--Cc---cHH
Confidence 378889999998888999999887 2233344345555566777776655 478877543 22 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.++|++++ ++||+ +| .|+ -+++.+.++.
T Consensus 95 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 95 KTLKLVKQAEKLGANGVLVVTPY--YNKPT-------QEGLYQHYKYISERT-DLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHTTC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 67899999999999999876432 11100 001234555666665 57754 34 233 4566665554
No 321
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.93 E-value=0.03 Score=54.19 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=56.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..+.++.+.++|+|.|.+++- .|.. ...|+.+.++++.+|++||+ .|+|.+.+++.++++. +|+|.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a----~g~~--------~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTA----HGHS--------AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVK 300 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCS----CTTC--------HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCeEEEeee----cCcc--------hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEE
Confidence 357788999999999999862 1211 12578899999988789999 9999999999999987 99999
Q ss_pred Eehh
Q psy2386 213 LGRE 216 (311)
Q Consensus 213 igRa 216 (311)
+|.|
T Consensus 301 vg~g 304 (491)
T 1zfj_A 301 VGIG 304 (491)
T ss_dssp ECSS
T ss_pred ECcc
Confidence 9853
No 322
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.91 E-value=0.059 Score=48.66 Aligned_cols=126 Identities=16% Similarity=0.065 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |-. +..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~ 83 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVG----------TTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT--GAN---STR 83 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC--CCC---CHH
Confidence 4778899999988889999997762 123333334444466677666655 47887743 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.+++.+++ ++||+ +| |---+++.+.++.
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~--y~~~~-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 84 EAIELTKAAKDLGADAALLVTPY--YNKPT-------QEGLYQHYKAIAEAV-ELPLILYNVPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEecccccCCCCCHHHHHHHH
Confidence 67899999999999999876432 11110 001245566677766 67764 43 3334555555543
No 323
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.90 E-value=0.11 Score=47.13 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=79.0
Q ss_pred HHHHHcCCCEEE----eccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEE--E--eccC--CCCCcHHHH
Q psy2386 65 KIIQKWGYDEIN----LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVK--H--RIGI--DDINSYDFV 134 (311)
Q Consensus 65 ~~~~~~g~d~Id----iN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvK--i--R~g~--~~~~~~~~~ 134 (311)
+.+.+.|+|+|- ||.|.|... +..+.+.++++++.+ .++|+.+= + |.|- .++.+.+.+
T Consensus 135 e~AvrlGADaV~~l~~i~~Gs~~e~-----------~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg~v~~~~dp~~V 202 (307)
T 3fok_A 135 SSMVDRGVDFAKTLVRINLSDAGTA-----------PTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNGKVVNDLSTDAV 202 (307)
T ss_dssp HHHHHHTCCEEEEEEEECTTCTTHH-----------HHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETTEEEECCSHHHH
T ss_pred HHHHHCCCCEEEEEEEECCCChhHH-----------HHHHHHHHHHHHHHH-cCCcEEEEeeccccCCCCcCCCCCHHHH
Confidence 344567999966 677777542 334666777777665 48897774 2 3221 122334455
Q ss_pred HHHHHHHHHcCCC----EEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCC--CHHHHHHHHh--
Q psy2386 135 RDFVGTVSSAGCR----TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK--TKKEIDLHLN-- 206 (311)
Q Consensus 135 ~e~~~~l~~~G~~----~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~--s~~da~~~l~-- 206 (311)
...++...+.|+| .|.+- |. +..+++.+.. .+||+..||=. +.+++.++.+
T Consensus 203 a~aaRiAaELGADs~~tivK~~---------------y~-----e~f~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v~~A 261 (307)
T 3fok_A 203 IQSVAIAAGLGNDSSYTWMKLP---------------VV-----EEMERVMEST-TMPTLLLGGEGGNDPDATFASWEHA 261 (307)
T ss_dssp HHHHHHHHTCSSCCSSEEEEEE---------------CC-----TTHHHHGGGC-SSCEEEECCSCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCEEEeC---------------Cc-----HHHHHHHHhC-CCCEEEeCCCCCCCHHHHHHHHHHH
Confidence 6667778899999 77551 11 2257888887 59988777665 5677766653
Q ss_pred ---h-cCEEEEehhhhh
Q psy2386 207 ---Y-IDGVMLGREAYK 219 (311)
Q Consensus 207 ---~-adgVmigRa~l~ 219 (311)
. +.||.+||-++.
T Consensus 262 ~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 262 LTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp TTSTTEEEEEECTTTSS
T ss_pred HHhCCCeEEeechhhcc
Confidence 2 789999999987
No 324
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.90 E-value=0.051 Score=50.39 Aligned_cols=126 Identities=12% Similarity=0.018 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++- ..|-+..-+.+.-.++++.+++.+ .+||.+-+-. . +.+
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~--~---st~ 113 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLG----------SGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG--T---NAR 113 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS--S---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--C---CHH
Confidence 4788899999988899999998872 233334345555567777776655 4788764432 2 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.++|++++ ++||+ +| |---+++.+.++.
T Consensus 114 eai~la~~A~~~Gadavlv~~P~--Y~~~s-------~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 114 ETIELSQHAQQAGADGIVVINPY--YWKVS-------EANLIRYFEQVADSV-TLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCS--SSCCC-------HHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 67899999999999999876432 11111 001245566777776 68864 45 3234667666665
No 325
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.89 E-value=0.056 Score=49.48 Aligned_cols=85 Identities=12% Similarity=0.075 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
.=|.+.+.+-++.+.+.|+|+|=++- ..|-+..-..+.-.++++.+++.+ .+||.+-+ |-. +.
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g~~---st 103 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVG----------TTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA--GSN---ST 103 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CCS---SH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCc----------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC--CCC---CH
Confidence 34788999999999899999998762 223333334454466667666655 57888743 322 23
Q ss_pred HHHHHHHHHHHHcCCCEEEEec
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHA 153 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~ 153 (311)
.+.+++++.+++.|+|++.+..
T Consensus 104 ~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECC
Confidence 4688999999999999998764
No 326
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.89 E-value=0.021 Score=55.77 Aligned_cols=71 Identities=17% Similarity=0.364 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
+..+.+..|.++|+|.|+|..-. |++- .-.+.++.+++.+|+++|| .|+|.|++.++.+++. ||+|
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ah----Ghs~--------~v~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li~aGAD~v 347 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQ----GNSV--------YQIEFIKWIKQTYPKIDVI-AGNVVTREQAAQLIAAGADGL 347 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSC----CCSH--------HHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHhcCCcEEEEeccc----cccH--------HHHHHHHHHHhhCCcceEE-eccccCHHHHHHHHHcCCCEE
Confidence 45688999999999999985332 2221 1368899999999887764 5899999999999987 9999
Q ss_pred EEehh
Q psy2386 212 MLGRE 216 (311)
Q Consensus 212 migRa 216 (311)
-||-|
T Consensus 348 kVGiG 352 (556)
T 4af0_A 348 RIGMG 352 (556)
T ss_dssp EECSS
T ss_pred eecCC
Confidence 98865
No 327
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.85 E-value=0.34 Score=42.43 Aligned_cols=144 Identities=16% Similarity=0.236 Sum_probs=82.6
Q ss_pred CCCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEE
Q psy2386 45 EHPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKH 121 (311)
Q Consensus 45 ~~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKi 121 (311)
+.+++.=+-= .-|+..+.+++.+.++|+|.+.+|... + ++-+...++...+.- +.|..+-+
T Consensus 59 g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~~~-----------G-----~~~~~~a~~~~~~~~~~~~~~l~~V 122 (239)
T 3tr2_A 59 GYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHISG-----------G-----RTMMETVVNALQSITLKEKPLLIGV 122 (239)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG-----------C-----HHHHHHHHHHHHTCCCSSCCEEEEE
T ss_pred CCCEEEEecccccchHHHHHHHHHHhCCCCEEEEeccC-----------C-----HHHHHHHHHHHHhcCcCCCceEEEE
Confidence 4667766653 347777778888899999999999422 1 233444444443321 12322221
Q ss_pred ec--cCCC---------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE
Q psy2386 122 RI--GIDD---------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII 190 (311)
Q Consensus 122 R~--g~~~---------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi 190 (311)
-. ..+. ..-.+...++++...++|++.+++.+.. +..+++.++.-.++
T Consensus 123 t~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~~e---------------------~~~ir~~~~~~fl~ 181 (239)
T 3tr2_A 123 TILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSAQE---------------------AALLRKQFDRNFLL 181 (239)
T ss_dssp CSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCHHH---------------------HHHHHTTCCTTSEE
T ss_pred EEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECchh---------------------HHHHHHhcCCCcEE
Confidence 11 1110 1112345667777888899999775432 34566665433466
Q ss_pred EecCCCCHHH----------HHHHHhh-cCEEEEehhhhhCCcchH
Q psy2386 191 INGGIKTKKE----------IDLHLNY-IDGVMLGREAYKNPFLMS 225 (311)
Q Consensus 191 ~nGgI~s~~d----------a~~~l~~-adgVmigRa~l~~P~i~~ 225 (311)
...||+-..+ ..++++. +|.+.+||+++..+....
T Consensus 182 vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~ 227 (239)
T 3tr2_A 182 VTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLK 227 (239)
T ss_dssp EECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred ECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHH
Confidence 7777763211 3344444 999999999988655433
No 328
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.76 E-value=0.084 Score=46.18 Aligned_cols=117 Identities=10% Similarity=-0.012 Sum_probs=79.9
Q ss_pred HHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh
Q psy2386 104 DCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD 183 (311)
Q Consensus 104 ~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~ 183 (311)
++++.+++. +|..=+|.. + . ++..++++.+.+.|+..|-+.-|+. ...+.|+++++.
T Consensus 26 ~~~~~l~~~---~vv~Vir~~-~-~---~~a~~~a~al~~gGi~~iEvt~~t~---------------~a~e~I~~l~~~ 82 (232)
T 4e38_A 26 TINNQLKAL---KVIPVIAID-N-A---EDIIPLGKVLAENGLPAAEITFRSD---------------AAVEAIRLLRQA 82 (232)
T ss_dssp HHHHHHHHH---CEEEEECCS-S-G---GGHHHHHHHHHHTTCCEEEEETTST---------------THHHHHHHHHHH
T ss_pred HHHHHHHhC---CEEEEEEcC-C-H---HHHHHHHHHHHHCCCCEEEEeCCCC---------------CHHHHHHHHHHh
Confidence 455555553 555556652 1 1 2478999999999999999977763 246889999999
Q ss_pred CCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccCCCCCCCCCHHHHHHH
Q psy2386 184 FPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINR 249 (311)
Q Consensus 184 ~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (311)
+|+ .+++.|.|.+.++++..++. ||+|+..- .+|.+.+...+. +-.-.+...|+.|....
T Consensus 83 ~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~---~~~~vi~~~~~~--gi~~ipGv~TptEi~~A 143 (232)
T 4e38_A 83 QPE-MLIGAGTILNGEQALAAKEAGATFVVSPG---FNPNTVRACQEI--GIDIVPGVNNPSTVEAA 143 (232)
T ss_dssp CTT-CEEEEECCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHH--TCEEECEECSHHHHHHH
T ss_pred CCC-CEEeECCcCCHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHc--CCCEEcCCCCHHHHHHH
Confidence 864 78899999999999999987 99998752 355555554432 11100113466666544
No 329
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=95.74 E-value=0.3 Score=42.47 Aligned_cols=135 Identities=15% Similarity=0.073 Sum_probs=77.3
Q ss_pred HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHc
Q psy2386 65 KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSA 144 (311)
Q Consensus 65 ~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~ 144 (311)
..+.++|+|.|-|+.++- +.. ...+.+.++...+. +.-+.| -+| ++ .+. +.+...
T Consensus 82 ~~l~~~Ga~~VllghseR-----R~~--------~~e~~~k~~~A~~~-GL~~iv--cVg----e~----~e~-~~~~~~ 136 (225)
T 1hg3_A 82 EAVKEAGAVGTLLNHSEN-----RMI--------LADLEAAIRRAEEV-GLMTMV--CSN----NP----AVS-AAVAAL 136 (225)
T ss_dssp HHHHHTTCCEEEESCGGG-----CCB--------HHHHHHHHHHHHHH-TCEEEE--EES----SH----HHH-HHHHTT
T ss_pred HHHHHcCCCEEEECcchh-----cCC--------HHHHHHHHHHHHHC-CCEEEE--EeC----CH----HHH-HHHhcC
Confidence 456788999999974431 111 11234444444332 443333 333 11 121 445667
Q ss_pred CCCEEEEecCccccccCCCCcCCCCCcCc-HHHHHHH-HHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCC
Q psy2386 145 GCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNL-KKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 145 G~~~itvh~Rt~~~~G~~g~~~~~~~~~~-~~~i~~i-~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P 221 (311)
+.+.|-+-+|.. -| +|..- .+...+ .+.+.++ ++..++++|++-|+|.+.+++..+... +||+.||++++.-+
T Consensus 137 ~~~iIayep~wa--iG-tG~~v-~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~ 212 (225)
T 1hg3_A 137 NPDYVAVEPPEL--IG-TGIPV-SKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAK 212 (225)
T ss_dssp CCSEEEECCTTT--TT-TSCCT-TTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCS
T ss_pred CCCEEEEeChhh--hc-cCCCC-CCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCc
Confidence 888888888853 23 11000 011122 2322232 332336899999999999999988876 99999999999877
Q ss_pred cchHHhH
Q psy2386 222 FLMSNFD 228 (311)
Q Consensus 222 ~i~~~~~ 228 (311)
.+..-+.
T Consensus 213 ~~~~~i~ 219 (225)
T 1hg3_A 213 DPEKAIW 219 (225)
T ss_dssp SHHHHHH
T ss_pred CHHHHHH
Confidence 6544443
No 330
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=95.73 E-value=0.057 Score=52.18 Aligned_cols=123 Identities=10% Similarity=0.074 Sum_probs=84.3
Q ss_pred CCCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~ 131 (311)
+.+|+++++.|+...+ .||..|-|..|.+ +++.-.+.++++|++. ++.+.|-..-+|+.
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~---- 258 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFPHARVTLDPNGAWSL---- 258 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBCH----
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCH----
Confidence 3689999998887665 6999999987643 2233345677777765 44555555555653
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc----HHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK----YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~----~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
++...+++.+++. +.+|- + ..++-| ++..+++++.. .+||.+.=-+.++.++.++++.
T Consensus 259 ~~Ai~~~~~Le~~-l~~iE---------------e-P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~ 320 (470)
T 3p0w_A 259 NEAIALCKGQGHL-VAYAE---------------D-PCGPEAGYSGREVMAEFKRAT-GIPTATNMIATDWRQMGHAVQL 320 (470)
T ss_dssp HHHHHHHTTCTTT-CSEEE---------------S-CBCCBTTBCHHHHHHHHHHHH-CCCEEESSSSCSHHHHHHHHHT
T ss_pred HHHHHHHHhcccc-ceeec---------------C-CCChhhccchHHHHHHHHhcC-CCCEEeCCccCCHHHHHHHHHc
Confidence 3567788878776 55551 1 112234 67788999887 6999886678889999999875
Q ss_pred --cCEEEE
Q psy2386 208 --IDGVML 213 (311)
Q Consensus 208 --adgVmi 213 (311)
+|.+++
T Consensus 321 ~a~div~~ 328 (470)
T 3p0w_A 321 HAVDIPLA 328 (470)
T ss_dssp TCCSEEBC
T ss_pred CCCCEEEe
Confidence 887764
No 331
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=95.71 E-value=0.043 Score=50.47 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=81.4
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEecc
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIG 124 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g 124 (311)
|+-..+...+|+++.+.++ +.||..+-+..|.| |..+ +.-.+.++++|+.+ ++.+.|-..-+
T Consensus 71 ~~~~ti~~~~~e~~~~~~~---~~G~~~~KiKvg~~---------g~~~----~~d~~~v~avR~~~G~~~~L~vDaN~~ 134 (327)
T 2opj_A 71 PVNATVPAVGPEEAARIVA---SSGCTTAKVKVAER---------GQSE----ANDVARVEAVRDALGPRGRVRIDVNGA 134 (327)
T ss_dssp EBCEEECSCCHHHHHHHHH---HHCCSEEEEECCC-------------------CHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred EEeEEeCCCCHHHHHHHHH---HCCCCEEEEEeCCC---------CCCH----HHHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 4445566678887655544 46999999987643 1112 22245677777766 45666666666
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHH
Q psy2386 125 IDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLH 204 (311)
Q Consensus 125 ~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~ 204 (311)
|+. ++..++++.+++.++.+| ++ |..+++..+++++.. .+||.+.=.+.+..|+.++
T Consensus 135 w~~----~~A~~~~~~L~~~~l~~i---------------Eq---P~~~~~~~~~l~~~~-~iPIa~dEs~~~~~~~~~~ 191 (327)
T 2opj_A 135 WDV----DTAVRMIRLLDRFELEYV---------------EQ---PCATVDELAEVRRRV-SVPIAADESIRRAEDPLRV 191 (327)
T ss_dssp SCH----HHHHHHHHHHGGGCEEEE---------------EC---CSSSHHHHHHHHHHC-SSCEEC-----------CT
T ss_pred CCH----HHHHHHHHHHHhcCCcEE---------------eC---CCCCHHHHHHHHhhC-CCCEEcCCCCCCHHHHHHH
Confidence 653 356789999999887766 11 112578888999888 7999999899999999998
Q ss_pred Hhh--cCEEEEehhhhhCC
Q psy2386 205 LNY--IDGVMLGREAYKNP 221 (311)
Q Consensus 205 l~~--adgVmigRa~l~~P 221 (311)
++. +|.|++==.-.+..
T Consensus 192 i~~~a~d~i~ik~~~~GGi 210 (327)
T 2opj_A 192 RDAEAADVVVLKVQPLGGV 210 (327)
T ss_dssp TTTTCCSBEEECHHHHTSH
T ss_pred HHhCCCCEEEeCccccCCH
Confidence 765 99998854444433
No 332
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.70 E-value=0.076 Score=45.78 Aligned_cols=136 Identities=13% Similarity=0.219 Sum_probs=79.2
Q ss_pred CCCeEEEec-CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccc-ceeEEEEe
Q psy2386 45 EHPIAFQVG-DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE-IDITVKHR 122 (311)
Q Consensus 45 ~~p~~~Ql~-g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~-~pvsvKiR 122 (311)
+.+++.=+- +.-|+....+++.+.++|+|.|.+|.. ++ .+ +++...+... .-+.|-+-
T Consensus 58 ~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~-----------~G-----~~----~l~~~~~~~~~~~~~V~~l 117 (213)
T 1vqt_A 58 NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSC-----------AG-----YE----SVERALSATDKHVFVVVKL 117 (213)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGG-----------GC-----HH----HHHHHHHHCSSEEEEECCC
T ss_pred CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEecc-----------CC-----HH----HHHHHHHhcCCCeEEEEEe
Confidence 456776664 334566677777777899999999932 11 12 2223322222 11233222
Q ss_pred ccCCCCCcH-HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH--
Q psy2386 123 IGIDDINSY-DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKK-- 199 (311)
Q Consensus 123 ~g~~~~~~~-~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~-- 199 (311)
...+.. . +.....++. .+.|++ +.+.+ +.++++++.++ -| +..+||.-..
T Consensus 118 ts~~~~--l~~~v~~~a~~-~e~G~d-vV~~~---------------------~~~~~ir~~~~-~~-~v~pGI~~~~~~ 170 (213)
T 1vqt_A 118 TSMEGS--LEDYMDRIEKL-NKLGCD-FVLPG---------------------PWAKALREKIK-GK-ILVPGIRMEVKA 170 (213)
T ss_dssp TTSCCC--HHHHHHHHHHH-HHHTCE-EECCH---------------------HHHHHHTTTCC-SC-EEECCBC-----
T ss_pred CCCCHH--HHHHHHHHHHH-hcCCCE-EEEcH---------------------HHHHHHHHHCC-CC-EEECCCCCCCCc
Confidence 222221 2 345677888 899999 43321 34667777774 46 7788886432
Q ss_pred -H------HHHHHhh-cCEEEEehhhhhCCcchHHhH
Q psy2386 200 -E------IDLHLNY-IDGVMLGREAYKNPFLMSNFD 228 (311)
Q Consensus 200 -d------a~~~l~~-adgVmigRa~l~~P~i~~~~~ 228 (311)
| ..+ ++. +|++.+||+.+..+.-...++
T Consensus 171 ~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~ 206 (213)
T 1vqt_A 171 DDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIK 206 (213)
T ss_dssp ----CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHH
T ss_pred cchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHH
Confidence 2 456 655 999999999987776444333
No 333
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.70 E-value=0.068 Score=48.31 Aligned_cols=125 Identities=10% Similarity=0.041 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |.. +.++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ 85 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNG----------TTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT--GTN---DTEK 85 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---CHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC--Ccc---cHHH
Confidence 678888888888899999998872 223333334444456666666654 57888743 322 2346
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
.+++++.+++.|+|++.+..-. +...+ ...-+++.+++.+++ ++||+ +| |---+++.+.++.
T Consensus 86 ai~la~~a~~~Gadavlv~~P~--y~~~~-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 153 (292)
T 3daq_A 86 SIQASIQAKALGADAIMLITPY--YNKTN-------QRGLVKHFEAIADAV-KLPVVLYNVPSRTNMTIEPETVEILS 153 (292)
T ss_dssp HHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHH-CSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEecccccCCCCCHHHHHHHh
Confidence 8899999999999999876432 11100 001244566666665 57764 44 4344566655554
No 334
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.68 E-value=0.11 Score=46.93 Aligned_cols=126 Identities=12% Similarity=0.057 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++- ..|-+..-+.+.-.++++.+.+.+ .+||.+-+ |-. +.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~ 82 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVG----------TTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA--GSN---CTE 82 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCC---CHH
Confidence 3788899999988899999998872 233334345555567777776655 47877644 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.++++++. ++||+ +| |---+++.+.++.
T Consensus 83 ~ai~la~~a~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 83 EAIELSVFAEDVGADAVLSITPY--YNKPT-------QEGLRKHFGKVAESI-NLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 67899999999999999876432 11100 001234556666666 57764 44 3334666666654
No 335
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=95.67 E-value=0.084 Score=50.71 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=84.4
Q ss_pred CCCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~ 131 (311)
+.+|+++++.|+...+ .||..|-|..|.+ +++.-.+.++++|++. ++.+.|-..-+|+.
T Consensus 180 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~---- 240 (450)
T 3mzn_A 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFPEARLALDPNGAWKL---- 240 (450)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBCH----
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----
Confidence 3579999998887655 6999999987643 2233345677777765 44555555555653
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc----HHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK----YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~----~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
++...+++.+++. +.+|- + ..++-| ++..+++++.. .+||.+.=-+.++.++.++++.
T Consensus 241 ~~A~~~~~~L~~~-i~~iE---------------e-P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ 302 (450)
T 3mzn_A 241 DEAVRVLEPIKHL-LSYAE---------------D-PCGQEGGFSGRETMAEFKKRT-GLPTATNMIATDYKQLQYAVQL 302 (450)
T ss_dssp HHHHHHHGGGGGG-CSEEE---------------S-SBCCBTTBCHHHHHHHHHHHH-CCCEEESSSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhhhc-cceee---------------C-CCCcccccchHHHHHHHHHhc-CCCEEeCCccCCHHHHHHHHHc
Confidence 3567888888876 66551 1 011224 67788999887 6998886677889999988865
Q ss_pred --cCEEEE
Q psy2386 208 --IDGVML 213 (311)
Q Consensus 208 --adgVmi 213 (311)
+|.+++
T Consensus 303 ~a~di~~~ 310 (450)
T 3mzn_A 303 NSVDIPLA 310 (450)
T ss_dssp TCCSEEBC
T ss_pred CCCCEEEe
Confidence 887764
No 336
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.67 E-value=0.089 Score=47.85 Aligned_cols=127 Identities=13% Similarity=0.071 Sum_probs=79.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
.=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+++.+ .+||.+-+ |-.. .
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv--g~~~---t 96 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSG----------TTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA--GTYD---T 96 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--CCSC---H
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC--CCCC---H
Confidence 34788999999999899999998872 223333334555566777776655 47887753 3222 3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
++.+++++.+++.|+|++.+..-. |...+ ...-+++.++|.+++ ++||+ +| |--.+++.+.++.
T Consensus 97 ~~ai~la~~a~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 97 AHSIRLAKACAAEGAHGLLVVTPY--YSKPP-------QRGLQAHFTAVADAT-ELPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHTSC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCCHHHHHHHh
Confidence 468899999999999999886432 11100 001234566666666 67764 44 4444566655554
No 337
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.66 E-value=0.11 Score=47.57 Aligned_cols=95 Identities=12% Similarity=0.136 Sum_probs=70.5
Q ss_pred CChHHHHHHHHHHhccccceeEEEEeccCC-CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHH
Q psy2386 97 TKPLLVSDCIKAMRDSVEIDITVKHRIGID-DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN 175 (311)
Q Consensus 97 ~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~-~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~ 175 (311)
..++.+.+.++.+++.++.|+.|-+-.... ... ...+.++.+.+.|++.|++|... .++
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~---~~~~~~~~~~~~g~d~V~~~~g~-----------------p~~ 109 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPV---PYAEYRAAIIEAGIRVVETAGND-----------------PGE 109 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCC---CHHHHHHHHHHTTCCEEEEEESC-----------------CHH
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCc---cHHHHHHHHHhcCCCEEEEcCCC-----------------cHH
Confidence 458888899999988778888776654210 011 13577888899999999998542 156
Q ss_pred HHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE-eh
Q psy2386 176 FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 215 (311)
Q Consensus 176 ~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi-gR 215 (311)
+++++++. ++||+. ++.|++++....+. +|+|.+ |+
T Consensus 110 ~~~~l~~~--gi~vi~--~v~t~~~a~~~~~~GaD~i~v~g~ 147 (328)
T 2gjl_A 110 HIAEFRRH--GVKVIH--KCTAVRHALKAERLGVDAVSIDGF 147 (328)
T ss_dssp HHHHHHHT--TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred HHHHHHHc--CCCEEe--eCCCHHHHHHHHHcCCCEEEEECC
Confidence 78888775 689884 48999999988776 999998 54
No 338
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.65 E-value=0.055 Score=52.84 Aligned_cols=69 Identities=14% Similarity=0.240 Sum_probs=54.0
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..+.++.+.++|++.|.+..-.. .+ ..-++.++++++.+|++||++ |+|.|.++++.+.+. +|+|.
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g----~~--------~~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~~aGad~i~ 323 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG----HS--------QGVIDKVKEVRAKYPSLNIIA-GNVATAEATKALIEAGANVVK 323 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT----TS--------HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHhhccceEEeccccc----ch--------hhhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHHHhCCCEEE
Confidence 36778899999999999974321 00 013578999999987788874 789999999999987 99999
Q ss_pred Eeh
Q psy2386 213 LGR 215 (311)
Q Consensus 213 igR 215 (311)
+|-
T Consensus 324 vg~ 326 (511)
T 3usb_A 324 VGI 326 (511)
T ss_dssp ECS
T ss_pred ECC
Confidence 854
No 339
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.64 E-value=0.049 Score=49.50 Aligned_cols=84 Identities=7% Similarity=0.018 Sum_probs=59.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-..+.-.++++.+++.+ .+||.+-+-. . +.+
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~----------GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t~ 86 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPL----------GSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS--T---SVA 86 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTT----------SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC--C---CHH
Confidence 478889999998889999998766 1223333334444466677766655 5788886543 1 233
Q ss_pred HHHHHHHHHHHcCCCEEEEec
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHA 153 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~ 153 (311)
+.+++++.+++.|+|++.+..
T Consensus 87 ~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 87 DAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp HHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 678999999999999998753
No 340
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.62 E-value=0.12 Score=46.93 Aligned_cols=126 Identities=12% Similarity=0.101 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeEEEEeccCCCCCcH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvsvKiR~g~~~~~~~ 131 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |-. +.
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv--g~~---~t 89 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVG----------TTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA--GSN---AT 89 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC--CCS---SH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC--CCC---CH
Confidence 4788899999998899999998872 223333334555566777766655 36877743 322 23
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
.+.+++++.+++.|+|++.+..-. +...+ ...-+++.+++.+++ ++||+ +| |---+++.+.++.
T Consensus 90 ~~ai~la~~a~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 90 HEAVGLAKFAKEHGADGILSVAPY--YNKPT-------QQGLYEHYKAIAQSV-DIPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEeCchhhCcCCCHHHHHHHH
Confidence 468899999999999999876432 11100 001234556666666 56654 33 3334555555544
No 341
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=95.60 E-value=0.4 Score=43.00 Aligned_cols=98 Identities=8% Similarity=0.037 Sum_probs=61.3
Q ss_pred EEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCC
Q psy2386 49 AFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI 128 (311)
Q Consensus 49 ~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~ 128 (311)
++-+...|.- .|++++++|+|.| + .|--..++. -|+-..+.-..+.+...+++|++.++.|+.| .-+++-..
T Consensus 36 i~~~tayDa~----sA~l~e~aG~d~i-l-vGdSl~~~~-lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy 107 (281)
T 1oy0_A 36 WAMLTAYDYS----TARIFDEAGIPVL-L-VGDSAANVV-YGYDTTVPISIDELIPLVRGVVRGAPHALVV-ADLPFGSY 107 (281)
T ss_dssp EEEEECCSHH----HHHHHHTTTCCEE-E-ECTTHHHHT-TCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTSS
T ss_pred EEEEeCcCHH----HHHHHHHcCCCEE-E-ECHHHHHHH-cCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCcc
Confidence 4556666754 5788889999999 4 354433332 2444555556677777788888888766554 45544222
Q ss_pred -CcHHHHHH-HHHHHHHcCCCEEEEecC
Q psy2386 129 -NSYDFVRD-FVGTVSSAGCRTFIVHAR 154 (311)
Q Consensus 129 -~~~~~~~e-~~~~l~~~G~~~itvh~R 154 (311)
.+.+...+ ..+.++++|+++|.+-+.
T Consensus 108 ~~s~~~a~~na~rl~~eaGa~aVklEdg 135 (281)
T 1oy0_A 108 EAGPTAALAAATRFLKDGGAHAVKLEGG 135 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSEEEEEBS
T ss_pred cCCHHHHHHHHHHHHHHhCCeEEEECCc
Confidence 12333444 445556699999999765
No 342
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.59 E-value=0.67 Score=41.08 Aligned_cols=141 Identities=11% Similarity=0.158 Sum_probs=81.4
Q ss_pred CCCeEEEecCC-CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--c--ceeEE
Q psy2386 45 EHPIAFQVGDN-EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--E--IDITV 119 (311)
Q Consensus 45 ~~p~~~Ql~g~-~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~--~pvsv 119 (311)
+.+++.=+--. -|+..+.+++.+.++|+|.+.+|... + ++-+...+++..+.. + .|-.+
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~-----------G-----~~~~~aa~~~~~~~~~~g~~~~~li 119 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALG-----------G-----SQMIKSAKDGLIAGTPAGHSVPKLL 119 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG-----------C-----HHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCC-----------C-----HHHHHHHHHHHHHhcccCCCCceEE
Confidence 56677666544 47777888888889999999999322 1 233444444443211 1 23122
Q ss_pred EEe--ccCC----------CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCC
Q psy2386 120 KHR--IGID----------DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPEL 187 (311)
Q Consensus 120 KiR--~g~~----------~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~i 187 (311)
-+. ...+ ..+-.+...++++...++|++.+++.+. . +..+++.+++-
T Consensus 120 ~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~~------------------e---~~~ir~~~~~~ 178 (259)
T 3tfx_A 120 AVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSPL------------------E---VKKLHENIGDD 178 (259)
T ss_dssp EECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCGG------------------G---HHHHHHHHCSS
T ss_pred EEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECHH------------------H---HHHHHhhcCCc
Confidence 111 1111 1111234457788888999999977532 1 34455544334
Q ss_pred eEEEecCCCCHH----H------HHHHHhh-cCEEEEehhhhhCCc
Q psy2386 188 EIIINGGIKTKK----E------IDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 188 pvi~nGgI~s~~----d------a~~~l~~-adgVmigRa~l~~P~ 222 (311)
.++...||+-.- | ..++++. +|.+.+||+++..+.
T Consensus 179 f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~d 224 (259)
T 3tfx_A 179 FLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASD 224 (259)
T ss_dssp SEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSS
T ss_pred cEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCC
Confidence 467778886421 1 4445554 999999999977554
No 343
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.57 E-value=0.059 Score=48.71 Aligned_cols=126 Identities=12% Similarity=0.021 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++- ..|-+..-+.+.-.++++.+++.+ .+||.+-+ |-. +..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~ 83 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVG----------TTGESATLNHDEHADVVMMTLDLADGRIPVIAGT--GAN---ATA 83 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCc---cHH
Confidence 4788899999988888999998872 233333344555566777776655 47887644 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.+++++++ ++||+ +| .|+ -+++.+.++.
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 84 EAISLTQRFNDSGIVGCLTVTPY--YNRPS-------QEGLYQHFKAIAEHT-DLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp HHHHHHHHTTTSSCSEEEEECCC--SSCCC-------HHHHHHHHHHHHTTC-SSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCcchhccCCCHHHHHHHH
Confidence 67899999999999999876432 11100 001234556666666 57764 44 233 4566665553
No 344
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.55 E-value=0.13 Score=46.53 Aligned_cols=126 Identities=12% Similarity=0.024 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+++.+ .+||.+-+ |-. +.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~ 82 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCG----------TTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT--GGN---ATH 82 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC--CCS---CHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHH
Confidence 3778898889988889999998872 223333334555566777766655 47877644 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.+++++++ ++||+ +| |---+++.+.++.
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 83 EAVHLTAHAKEVGADGALVVVPY--YNKPT-------QRGLYEHFKTVAQEV-DIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 67899999999999999876432 11110 001234566677776 67764 45 3234666666654
No 345
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=95.53 E-value=0.041 Score=50.02 Aligned_cols=70 Identities=21% Similarity=0.282 Sum_probs=50.1
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHH-HHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN-FVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~-~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
++...++|+|+|-++.-+ +.+.. .++.+....|++||.++||| +++.+.++.+. +|++.+|+
T Consensus 210 ~~~A~~aGaD~I~ld~~~---------------~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 210 AVQAAEAGADLVLLDNFK---------------PEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHTTCSEEEEESCC---------------HHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHcCCCEEEECCCC---------------HHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEECh
Confidence 444457899999886421 11222 23334444567999999999 99999999987 99999999
Q ss_pred hhhhCCcc
Q psy2386 216 EAYKNPFL 223 (311)
Q Consensus 216 a~l~~P~i 223 (311)
....-|++
T Consensus 274 ~i~~a~~~ 281 (299)
T 2jbm_A 274 LTQAAPAL 281 (299)
T ss_dssp HHHSCCCC
T ss_pred hhcCCCCc
Confidence 77665654
No 346
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=95.50 E-value=0.045 Score=51.64 Aligned_cols=128 Identities=9% Similarity=0.047 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHHH
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~~ 134 (311)
++++++.|+...+.||..|-+..|.+.... .-..+++.-.+.++++|+++ ++++.|-..-+|+. ++.
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~-------~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~----~~A 217 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGRHM-------PLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNL----NLT 217 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTTTS-------CHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCH----HHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccc-------cccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCH----HHH
Confidence 567777777777889999999887542100 00012455667788888875 56777777777764 356
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHh-----CCCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKD-----FPELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~-----~~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
.++++.+++.++.+| ++. .+ .|++..+++++. . .+||...=.+. ..++.++++.
T Consensus 218 ~~~~~~L~~~~l~~i---------------EeP-~~-~d~~~~~~l~~~~~~~~~-~ipIa~gE~~~-~~~~~~li~~~a 278 (392)
T 3v5c_A 218 KEVLAALSDVNLYWL---------------EAA-FH-EDEALYEDLKEWLGQRGQ-NVLIADGEGLA-SPHLIEWATRGR 278 (392)
T ss_dssp HHHHHHTTTSCCCEE---------------ECS-SS-CCHHHHHHHHHHHHHHTC-CCEEEECCSSC-CTTHHHHHHTTS
T ss_pred HHHHHhcccCCCeEE---------------eCC-CC-cCHHHHHHHHHhhccCCC-CCcEECCCccc-HHHHHHHHHcCC
Confidence 789999999888877 121 12 367777888764 4 58876666667 7888888865
Q ss_pred cCEEEEe
Q psy2386 208 IDGVMLG 214 (311)
Q Consensus 208 adgVmig 214 (311)
+|.|++=
T Consensus 279 ~dii~~d 285 (392)
T 3v5c_A 279 VDVLQYD 285 (392)
T ss_dssp CCEECCB
T ss_pred CcEEEeC
Confidence 8888774
No 347
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.48 E-value=0.1 Score=47.52 Aligned_cols=129 Identities=8% Similarity=0.047 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +.-|-+..-..+.-.++++.+.+.+ .+||.+-+-. . +..
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~----------GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~---~t~ 90 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCIL----------ANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH--Y---STQ 90 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEES----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--S---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC--c---hHH
Confidence 478889999999989999999886 2234434344555566777776655 5788875432 2 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCCCCHHHHHHHHh
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGIKTKKEIDLHLN 206 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI~s~~da~~~l~ 206 (311)
+.+++++.+++.|+|++.+..-. |.. +.+. ...-+++.+++++++ ++||+ +| |---+++.+.++.+
T Consensus 91 ~ai~la~~A~~~Gadavlv~~Py--y~~~~~~s-----~~~l~~~f~~va~a~-~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 91 VCAARSLRAQQLGAAMVMAMPPY--HGATFRVP-----EAQIFEFYARVSDAI-AIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSC--BTTTBCCC-----HHHHHHHHHHHHHHC-SSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC--CccCCCCC-----HHHHHHHHHHHHHhc-CCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 67899999999999999876431 110 0000 001245666777776 67764 44 43355666666653
No 348
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.47 E-value=0.054 Score=48.93 Aligned_cols=84 Identities=18% Similarity=0.090 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-+.+.-.++++.+++.+ .+||.+-+- -. +.+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~----------GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg--~~---~t~ 83 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVC----------GTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG--SN---NTA 83 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEES----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC--CS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC--cc---cHH
Confidence 477888888998888999999887 2233343344555566777766655 478876443 22 234
Q ss_pred HHHHHHHHHHHcCCCEEEEec
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHA 153 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~ 153 (311)
+.+++++.+++.|+|++.+..
T Consensus 84 ~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 84 ASIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEcC
Confidence 678999999999999998753
No 349
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=95.45 E-value=1.1 Score=41.21 Aligned_cols=91 Identities=11% Similarity=0.045 Sum_probs=61.1
Q ss_pred cccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcC--cHHHHHHHHHhCCCCeE
Q psy2386 112 SVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPIL--KYNFVYNLKKDFPELEI 189 (311)
Q Consensus 112 ~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~--~~~~i~~i~~~~~~ipv 189 (311)
..+.|+.+.+..+++. .++.+.++..|+++|.+|..... ...++.. .+.. -++.++++++.+ ++||
T Consensus 114 ~~~~pv~~~i~~~~~~-------~~~~~~~~~~gad~i~i~~~~~~-~~~~~~~---~~~~~~~~~~i~~vr~~~-~~Pv 181 (349)
T 1p0k_A 114 NPNGLIFANLGSEATA-------AQAKEAVEMIGANALQIHLNVIQ-EIVMPEG---DRSFSGALKRIEQICSRV-SVPV 181 (349)
T ss_dssp CSSSCEEEEEETTCCH-------HHHHHHHHHTTCSEEEEEECTTT-TC-----------CTTHHHHHHHHHHHC-SSCE
T ss_pred CCCceeEEeecCCCCH-------HHHHHHHHhcCCCeEEecccchh-hhcCCCC---CcchHHHHHHHHHHHHHc-CCCE
Confidence 3578998887765442 23456678899999999865321 1111100 1111 257899999988 7999
Q ss_pred EEe--cCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 190 IIN--GGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 190 i~n--GgI~s~~da~~~l~~-adgVmig 214 (311)
+.- |...+++++..+.+. +|+|.+.
T Consensus 182 ~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 182 IVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp EEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred EEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 875 555789999988876 9999994
No 350
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.43 E-value=0.034 Score=54.30 Aligned_cols=69 Identities=17% Similarity=0.370 Sum_probs=55.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..+.++.+.++|++.|.+|.-. |+. ...++.++++++.+|++||++ |+|.|.++++.+.+. +|+|.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~----G~~--------~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~ 322 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQ----GNS--------VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLR 322 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC----CCS--------HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccC----Ccc--------hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEE
Confidence 4677888999999999998642 210 124789999999987899986 789999999999876 99999
Q ss_pred Eeh
Q psy2386 213 LGR 215 (311)
Q Consensus 213 igR 215 (311)
+|.
T Consensus 323 vg~ 325 (514)
T 1jcn_A 323 VGM 325 (514)
T ss_dssp ECS
T ss_pred ECC
Confidence 954
No 351
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.43 E-value=0.14 Score=46.37 Aligned_cols=170 Identities=12% Similarity=0.101 Sum_probs=98.7
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEecc-CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI 128 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~-gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~ 128 (311)
+=+...|+- .|++++++|||.|=+-- +.- .+ -|+-....-..+.+...+++|.+.++.||.+-+-.|+-
T Consensus 18 ~~~~a~D~~----sA~~~~~aG~~ai~vs~~~~a--~~--~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-- 87 (290)
T 2hjp_A 18 TAMAAHNPL----VAKLAEQAGFGGIWGSGFELS--AS--YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-- 87 (290)
T ss_dssp EEEECSSHH----HHHHHHHHTCSEEEECHHHHH--HH--TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS--
T ss_pred EEecCCCHH----HHHHHHHcCCCEEEEChHHHH--Hh--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC--
Confidence 335555654 46778889999997751 111 11 23333345567788888899999999999999999964
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEecCcc-ccccCCCCcCCCCCcCc--HHHHHHHHHhC--CCCeEEEecCCC-C---HH
Q psy2386 129 NSYDFVRDFVGTVSSAGCRTFIVHARNA-FLKKLNPKQNRKIPILK--YNFVYNLKKDF--PELEIIINGGIK-T---KK 199 (311)
Q Consensus 129 ~~~~~~~e~~~~l~~~G~~~itvh~Rt~-~~~G~~g~~~~~~~~~~--~~~i~~i~~~~--~~ipvi~nGgI~-s---~~ 199 (311)
+ .++..+.++.+.++|+++|.+-+... .--|+.|......-|.+ .+.|+.+++.. +++-|++--|-. . .+
T Consensus 88 ~-~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~ 166 (290)
T 2hjp_A 88 N-AVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQ 166 (290)
T ss_dssp S-HHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHH
T ss_pred C-HHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHH
Confidence 2 33578889999999999999986642 01122110000011111 22344444442 245566655554 1 34
Q ss_pred HHH----HHHhh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 200 EID----LHLNY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 200 da~----~~l~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
++. .+.+. ||+|++=-+ ..++..++++.+.+
T Consensus 167 ~ai~Ra~ay~eAGAd~i~~e~~-~~~~~~~~~i~~~~ 202 (290)
T 2hjp_A 167 EAVRRGQAYEEAGADAILIHSR-QKTPDEILAFVKSW 202 (290)
T ss_dssp HHHHHHHHHHHTTCSEEEECCC-CSSSHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCcEEEeCCC-CCCHHHHHHHHHHc
Confidence 443 33332 999998321 24455666666654
No 352
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.37 E-value=0.23 Score=43.53 Aligned_cols=138 Identities=12% Similarity=0.174 Sum_probs=77.0
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc--cc--ce--eEEEE
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS--VE--ID--ITVKH 121 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~--~~--~p--vsvKi 121 (311)
+=+-++ ..|+....+++.+.++|+|.|-+|.-.. .+.+.+.++.+++. .+ .| +.|..
T Consensus 60 lD~kl~-Dip~t~~~~~~~~~~~Gad~vTvH~~~g----------------~~~l~~~~~~~~~~~~~G~~~~~~lav~~ 122 (246)
T 2yyu_A 60 LDLKLH-DIPNTVKQAMKGLARVGADLVNVHAAGG----------------RRMMEAAIEGLDAGTPSGRMRPRCIAVTQ 122 (246)
T ss_dssp EEEEEC-SCHHHHHHHHHHHHHTTCSEEEEEGGGC----------------HHHHHHHHHHHHHHSCSSSCCCEEEEESS
T ss_pred EEeecc-cchHHHHHHHHHHHhcCCCEEEEECCCC----------------HHHHHHHHHHHHhhcccCCcCCCEEEEEe
Confidence 335554 6788888888888899999999994221 23345666666652 23 24 32322
Q ss_pred eccCCC----------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE
Q psy2386 122 RIGIDD----------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 191 (311)
Q Consensus 122 R~g~~~----------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~ 191 (311)
....+. .+..+....++....+.|.+.+... -++ ++++++..+..+++.
T Consensus 123 ~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~--------------------~~e-i~~lr~~~~~~~i~V 181 (246)
T 2yyu_A 123 LTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS--------------------ANE-AAFIKERCGASFLAV 181 (246)
T ss_dssp CTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECC--------------------HHH-HHHHHHHHCTTSEEE
T ss_pred CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeC--------------------HHH-HHHHHHhcCCCCEEE
Confidence 222100 0000111111221244566654321 134 667776654345899
Q ss_pred ecCCCCH-H---------HHHHHHhh-cCEEEEehhhhhCCcc
Q psy2386 192 NGGIKTK-K---------EIDLHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 192 nGgI~s~-~---------da~~~l~~-adgVmigRa~l~~P~i 223 (311)
.|||+.- . .+.++++. +|.+.+||+++..+..
T Consensus 182 ~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp 224 (246)
T 2yyu_A 182 TPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADP 224 (246)
T ss_dssp ECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSH
T ss_pred eCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCH
Confidence 9999742 1 24445544 9999999999886553
No 353
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.37 E-value=0.2 Score=45.37 Aligned_cols=127 Identities=10% Similarity=0.113 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++- ..|-+..-..+.-.++++.+++.+ .+||.+-+ |-. +..
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv--g~~---~t~ 93 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGG----------STGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV--GCV---STA 93 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECe----------eccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CCC---CHH
Confidence 4788899999988889999998872 233333345555567777776655 47887743 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC-CeEE-Ee----cCC-CCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE-LEII-IN----GGI-KTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~-ipvi-~n----GgI-~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. |...+ ...-+++.++|.+++ + +||+ +| .|+ -+++.+.++.
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~~lPiilYn~P~~tg~~l~~~~~~~La 163 (303)
T 2wkj_A 94 ESQQLAASAKRYGFDAVSAVTPF--YYPFS-------FEEHCDHYRAIIDSA-DGLPMVVYNIPALSGVKLTLDQINTLV 163 (303)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHH-TTCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEecCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 67899999999999999876432 11111 001245667788877 5 8875 56 344 5778777775
Q ss_pred h
Q psy2386 206 N 206 (311)
Q Consensus 206 ~ 206 (311)
+
T Consensus 164 ~ 164 (303)
T 2wkj_A 164 T 164 (303)
T ss_dssp T
T ss_pred c
Confidence 3
No 354
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.36 E-value=0.42 Score=42.95 Aligned_cols=139 Identities=13% Similarity=0.112 Sum_probs=89.1
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC-
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI- 125 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~- 125 (311)
.+.+-++..+.+.... +++.|+|-|||+-+=... .| .|. ..+++.+++.+++||-|=||+-.
T Consensus 39 ~~~lEvc~~s~~~a~~----A~~gGAdRIELc~~l~~G---------Gl--TPS--~g~i~~a~~~~~ipV~vMIRPRgG 101 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVN----AERGGADRIELCSGLSEG---------GT--TPS--MGVLQVVKQSVQIPVFVMIRPRGG 101 (287)
T ss_dssp CSEEEEEESSHHHHHH----HHHHTCSEEEECBCGGGT---------CB--CCC--HHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CceEEEEeCCHHHHHH----HHHhCCCEEEECCCCCCC---------CC--CCC--HHHHHHHHHhcCCCeEEEEecCCC
Confidence 3678888888886543 457899999998332211 11 122 14456667777899988888621
Q ss_pred --C-CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCC---CCHH
Q psy2386 126 --D-DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGI---KTKK 199 (311)
Q Consensus 126 --~-~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI---~s~~ 199 (311)
. ++.+.+...+-++.+.++|+|.|+++.-+. . +..|.+..+++.+....++|..+=-+ .++.
T Consensus 102 dF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~--d----------g~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~ 169 (287)
T 3iwp_A 102 DFLYSDREIEVMKADIRLAKLYGADGLVFGALTE--D----------GHIDKELCMSLMAICRPLPVTFHRAFDMVHDPM 169 (287)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCT--T----------SCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHH
T ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCC--C----------CCcCHHHHHHHHHHcCCCcEEEECchhccCCHH
Confidence 1 122344555667888899999999986542 1 12688888877665435788777543 3566
Q ss_pred HHHHHHhh--cCEEEEe
Q psy2386 200 EIDLHLNY--IDGVMLG 214 (311)
Q Consensus 200 da~~~l~~--adgVmig 214 (311)
.+.+.+.. +|.|..+
T Consensus 170 ~Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 170 AALETLLTLGFERVLTS 186 (287)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEECC
Confidence 66655543 7777763
No 355
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.36 E-value=0.18 Score=45.79 Aligned_cols=126 Identities=16% Similarity=0.117 Sum_probs=79.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++- .-|-+..-..+.-.++++.+++.+ .+||.+-+ |-. +.+
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---st~ 98 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAG----------TTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV--GTN---NTR 98 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC--CCS---CHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC--CCC---CHH
Confidence 4788899999998899999998872 223333334555566777776655 47877644 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-. +...+ ...-+++.++|+++. ++||+ +| -|+ -+++.+.++.
T Consensus 99 ~ai~la~~A~~~Gadavlv~~P~--y~~~~-------~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 99 TSVELAEAAASAGADGLLVVTPY--YSKPS-------QEGLLAHFGAIAAAT-EVPICLYDIPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 67899999999999999876332 11100 001245566777776 67764 45 233 4666666553
No 356
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.31 E-value=0.19 Score=46.08 Aligned_cols=91 Identities=16% Similarity=0.232 Sum_probs=70.0
Q ss_pred ChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 98 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
+++.+.+.++.+++.++.|+.|.+-. ++. ...+.++.+.+.|++.|.+|+.. ..+++
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~-~~~-----~~~~~~~~~~~~g~d~V~l~~g~-----------------p~~~~ 117 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIIL-VSP-----WADDLVKVCIEEKVPVVTFGAGN-----------------PTKYI 117 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEET-TST-----THHHHHHHHHHTTCSEEEEESSC-----------------CHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEec-cCC-----CHHHHHHHHHHCCCCEEEECCCC-----------------cHHHH
Confidence 68889999999999888899887654 222 13577888899999999998653 13567
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE-eh
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 215 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi-gR 215 (311)
+++++. .++|+. .|.+.+++..+.+. +|+|.+ |+
T Consensus 118 ~~l~~~--g~~v~~--~v~s~~~a~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 118 RELKEN--GTKVIP--VVASDSLARMVERAGADAVIAEGM 153 (326)
T ss_dssp HHHHHT--TCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHc--CCcEEE--EcCCHHHHHHHHHcCCCEEEEECC
Confidence 777764 688875 68999999988876 999999 53
No 357
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.30 E-value=0.13 Score=46.33 Aligned_cols=126 Identities=10% Similarity=0.068 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcH
Q psy2386 55 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSY 131 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~ 131 (311)
=|.+.+.+-++.+.+ .|+|+|=++ +..|-+..-..+.-.++++.+++.+ .+||.+-+ |-.. .
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~----------GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~~---t 85 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVG----------GSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV--GSVN---L 85 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEES----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC--CCSC---H
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeC----------ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec--CCCC---H
Confidence 477889999998888 999999887 2234434445555567777776655 47877644 3222 3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHHHH
Q psy2386 132 DFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDLHL 205 (311)
Q Consensus 132 ~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~~l 205 (311)
++.+++++.+++.|+|++.+..-. |...+ ...-+++.+++++++ ++||+ +| .|+ -+++.+.++.
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~--y~~~~-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 155 (293)
T 1f6k_A 86 KEAVELGKYATELGYDCLSAVTPF--YYKFS-------FPEIKHYYDTIIAET-GSNMIVYSIPFLTGVNMGIEQFGELY 155 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHHH-CCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEECccccCcCCCHHHHHHHh
Confidence 467899999999999999876432 11111 001245566667666 57764 45 233 4666666654
No 358
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=95.29 E-value=0.57 Score=44.49 Aligned_cols=155 Identities=9% Similarity=0.036 Sum_probs=94.4
Q ss_pred CCCeEEEec---CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc---ccceeE
Q psy2386 45 EHPIAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS---VEIDIT 118 (311)
Q Consensus 45 ~~p~~~Ql~---g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~---~~~pvs 118 (311)
..|+++=+= |+.+ ...+.++.+.++|+.+|.|-=..+.+|.+..-.|-.|....+.+.+| ++++.+ .+.++.
T Consensus 148 ~~PIiaD~DtGfG~~~-nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI-~AAr~A~~~~g~d~v 225 (429)
T 1f8m_A 148 LAPIVADGEAGFGGAL-NVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTL-TSARLAADVADVPTV 225 (429)
T ss_dssp SCCEEEECTTTTSSHH-HHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHH-HHHHHHHHHTTCCCE
T ss_pred CCCEEEECCCCCCCcH-HHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHH-HHHHHHHHhcCCCEE
Confidence 379998874 4444 68888999999999999998666555544332333444434444444 444443 367777
Q ss_pred EEEeccCCC----------------------------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCC
Q psy2386 119 VKHRIGIDD----------------------------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP 170 (311)
Q Consensus 119 vKiR~g~~~----------------------------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~ 170 (311)
|=-|..-.. ....++.++-++.+.+ |+|.|-+++..
T Consensus 226 IiARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~--------------- 289 (429)
T 1f8m_A 226 VIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGT--------------- 289 (429)
T ss_dssp EEEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSS---------------
T ss_pred EEEEechhhhccccccccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCC---------------
Confidence 777764311 1235667778888877 99999998643
Q ss_pred cCcHHHHHHHHHhC----CCCeEEEecC-CCC------HHHHHHHHhh-----cCEEEEehhhh
Q psy2386 171 ILKYNFVYNLKKDF----PELEIIINGG-IKT------KKEIDLHLNY-----IDGVMLGREAY 218 (311)
Q Consensus 171 ~~~~~~i~~i~~~~----~~ipvi~nGg-I~s------~~da~~~l~~-----adgVmigRa~l 218 (311)
.+.+.++++.+.+ |..++.+|+- ..+ .+++..+.+. ...+.++-+.+
T Consensus 290 -~~~eei~~f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~ 352 (429)
T 1f8m_A 290 -PDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGF 352 (429)
T ss_dssp -CCHHHHHHHHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHHHHHHHHHHTEEEEEETTHHH
T ss_pred -CCHHHHHHHHHHhcccCCCceeecCCCCCCCcccccchhhHhHHHHHHHHcCCeEEEECcHHH
Confidence 2667777777655 3223444542 233 3444443322 66677765543
No 359
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.28 E-value=0.13 Score=46.37 Aligned_cols=66 Identities=9% Similarity=0.089 Sum_probs=48.8
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
++.+.++|+|+|.++.-+. +.++++.+.+ +++|+.+.|||+ ++.+.++.+. +|+|.+|.
T Consensus 209 a~eA~~aGaD~I~ld~~~~------------------~~~k~av~~v~~~ipi~AsGGIt-~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 209 LEEALEAGADLILLDNFPL------------------EALREAVRRVGGRVPLEASGNMT-LERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp HHHHHHHTCSEEEEESCCH------------------HHHHHHHHHHTTSSCEEEESSCC-HHHHHHHHHHTCSEEECTH
T ss_pred HHHHHHcCCCEEEECCCCH------------------HHHHHHHHHhCCCCeEEEEcCCC-HHHHHHHHHcCCCEEEEcH
Confidence 4556688999998876532 2333433332 268999999995 8999999987 99999998
Q ss_pred hhhhCCc
Q psy2386 216 EAYKNPF 222 (311)
Q Consensus 216 a~l~~P~ 222 (311)
....-|+
T Consensus 270 ~~~~a~~ 276 (286)
T 1x1o_A 270 LTHSAKA 276 (286)
T ss_dssp HHHSCCC
T ss_pred HHcCCCc
Confidence 7766565
No 360
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=95.27 E-value=0.17 Score=44.97 Aligned_cols=97 Identities=19% Similarity=0.241 Sum_probs=71.7
Q ss_pred CCC-eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEe
Q psy2386 45 EHP-IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHR 122 (311)
Q Consensus 45 ~~p-~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR 122 (311)
++| ++|-|.|.+.+++.+.|+.+.+.|+|.||+=+=+=.. ..+++.+.+.+..+++.. ++|+.+-+|
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~-----------~~~~~~v~~~l~~lr~~~~~lPiI~T~R 86 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN-----------VENIKEVKEVLYELRSYIHDIPLLFTFR 86 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc-----------cCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 456 8899999999999998888888999999995322100 135678889999998876 699999999
Q ss_pred ccCCCCC---cHHHHHHHHHHHHHcC-CCEEEEe
Q psy2386 123 IGIDDIN---SYDFVRDFVGTVSSAG-CRTFIVH 152 (311)
Q Consensus 123 ~g~~~~~---~~~~~~e~~~~l~~~G-~~~itvh 152 (311)
.-|+.+. +.++..++.+.+.+.| +++|-|.
T Consensus 87 t~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvE 120 (258)
T 4h3d_A 87 SVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVE 120 (258)
T ss_dssp CGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred chhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHh
Confidence 8554321 2234566777777776 8999875
No 361
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.25 E-value=0.12 Score=46.88 Aligned_cols=55 Identities=9% Similarity=0.079 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHh---ccccceeEEEEe
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMR---DSVEIDITVKHR 122 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~---~~~~~pvsvKiR 122 (311)
+++...+-|+...+.|+|.||||+|.+ .....+.+.+++..++ +.+++|++|-..
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~------------~v~~~eem~rvv~~i~~~~~~~~vpisIDT~ 92 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDG------------LLDARTEMTTFLNLIMSEPEIARVPVMIDSS 92 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCT------------TSCHHHHHHHHHHHHHTCHHHHTSCEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC------------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeCC
Confidence 456666667767788999999997532 2333455566666554 456899999643
No 362
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.25 E-value=0.11 Score=44.54 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=61.8
Q ss_pred HHHHHHhccccceeEEEEeccCCCCCc-HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCC-cCcHHHHHHHH
Q psy2386 104 DCIKAMRDSVEIDITVKHRIGIDDINS-YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP-ILKYNFVYNLK 181 (311)
Q Consensus 104 ~iv~~v~~~~~~pvsvKiR~g~~~~~~-~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~-~~~~~~i~~i~ 181 (311)
+.++++++.+++|+...++..+.+..- .....+.++.+.++|++.+++|.... ..+ ....+.+++++
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~-----------~~p~~~~~~~i~~~~ 114 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ-----------QRPKETLDELVSYIR 114 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS-----------CCSSSCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc-----------cCcccCHHHHHHHHH
Confidence 345566666788983322322211000 00013456777899999999996532 001 01257888999
Q ss_pred HhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 182 KDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 182 ~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigR 215 (311)
+.+|+++++. ++.|++++.++.+. +|.|+++-
T Consensus 115 ~~~~~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 115 THAPNVEIMA--DIATVEEAKNAARLGFDYIGTTL 147 (223)
T ss_dssp HHCTTSEEEE--ECSSHHHHHHHHHTTCSEEECTT
T ss_pred HhCCCceEEe--cCCCHHHHHHHHHcCCCEEEeCC
Confidence 8876777765 67899999887765 99998753
No 363
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.25 E-value=0.79 Score=40.04 Aligned_cols=137 Identities=13% Similarity=0.201 Sum_probs=77.2
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccc--e--eEEEEec
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI--D--ITVKHRI 123 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~--p--vsvKiR~ 123 (311)
+=+-++ ..|+....+++.+.++|+|.|-+|.-.. ++-+...++.+++. +. | +.|....
T Consensus 70 lD~kl~-Dip~t~~~~i~~~~~~Gad~vTvH~~~g----------------~~~l~~~~~~~~~~-G~~~~~~l~v~~~t 131 (245)
T 1eix_A 70 LDLKFH-DIPNTAAHAVAAAADLGVWMVNVHASGG----------------ARMMTAAREALVPF-GKDAPLLIAVTVLT 131 (245)
T ss_dssp EEEEEC-SCHHHHHHHHHHHHHHTCSEEEEBGGGC----------------HHHHHHHHHTTGGG-GGGCCEEEEECSCT
T ss_pred EEeecc-ccHHHHHHHHHHHHhCCCCEEEEeccCC----------------HHHHHHHHHHHHHc-CCCCCcEEEEEecC
Confidence 345665 6788877788888899999999994221 22345666666553 32 3 1232222
Q ss_pred cCCC---------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 124 GIDD---------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 124 g~~~---------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
..+. .+..+....++....+.|.+.+...+ ++ ++++++..++.+++..||
T Consensus 132 s~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------------~e-i~~lr~~~~~~~i~v~gG 190 (245)
T 1eix_A 132 SMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA--------------------QE-AVRFKQVFGQEFKLVTPG 190 (245)
T ss_dssp TCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG--------------------GG-HHHHHHHHCSSSEEEECC
T ss_pred CCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH--------------------HH-HHHHHHhcCCCCEEEECC
Confidence 1100 00011111122213345666543321 23 666666554468999999
Q ss_pred CCCHH----------HHHHHHhh-cCEEEEehhhhhCCcc
Q psy2386 195 IKTKK----------EIDLHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 195 I~s~~----------da~~~l~~-adgVmigRa~l~~P~i 223 (311)
|+.-- .+.++++. +|.+.+||+++..+..
T Consensus 191 I~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp 230 (245)
T 1eix_A 191 IRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDP 230 (245)
T ss_dssp BCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSH
T ss_pred cCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCH
Confidence 98420 34555555 9999999999886653
No 364
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=95.23 E-value=0.095 Score=47.92 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=84.0
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDI 128 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~ 128 (311)
..+.+.+|+.+.+.++...+.||..+-+..|- -.+ .+.++++++.+ ++.+.+-..-+|+..
T Consensus 126 ~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvg~--------------~~d----~~~v~avr~~~~~~~l~vDaN~~~~~~ 187 (324)
T 1jpd_X 126 QTVVIGTPDQMANSASTLWQAGAKLLKVKLDN--------------HLI----SERMVAIRTAVPDATLIVDANESWRAE 187 (324)
T ss_dssp EEECSCCHHHHHHHHHHHHHTTCSEEEEECCS--------------SCH----HHHHHHHHHHCTTSEEEEECTTCCCST
T ss_pred EEeeCCCHHHHHHHHHHHHHcCCCEEEEEeCC--------------chH----HHHHHHHHHhCCCCEEEEECcCCCCHH
Confidence 34566789999888887778899999987551 012 34566777765 445555555567653
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhhc
Q psy2386 129 NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYI 208 (311)
Q Consensus 129 ~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~a 208 (311)
+..++++.+++.++.+|- + . .++-|++..++++ . .+||.+.=.+.+..++.++++.+
T Consensus 188 ----~a~~~~~~l~~~~i~~iE--------q-------P-~~~~d~~~~~~l~--~-~ipIa~dE~~~~~~~~~~~~~~~ 244 (324)
T 1jpd_X 188 ----GLAARCQLLADLGVAMLE--------Q-------P-LPAQDDAALENFI--H-PLPICADESCHTRSNLKALKGRY 244 (324)
T ss_dssp ----THHHHHHHHHHTTCCEEE--------C-------C-SCTTSCGGGGSSC--C-SSCEEESTTCSSGGGHHHHBTTB
T ss_pred ----HHHHHHHHHHhCCCCEEE--------C-------C-CCCCCHHHHHhcc--C-CCCEEEcCCCCCHHHHHHHHhhC
Confidence 357899999999888872 1 0 1112444333332 3 58988888889999999988668
Q ss_pred CEEEEe
Q psy2386 209 DGVMLG 214 (311)
Q Consensus 209 dgVmig 214 (311)
|.|++=
T Consensus 245 ~~i~ik 250 (324)
T 1jpd_X 245 EMVNIK 250 (324)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 877774
No 365
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.23 E-value=0.42 Score=41.43 Aligned_cols=130 Identities=8% Similarity=-0.009 Sum_probs=81.5
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 46 HPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 46 ~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
-++++|...-....+.++.+.+.++||++||+.... .+ .-.+++.+.++.+.+.+ .++.++.=.-. .
T Consensus 18 ~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~-~~----------~~~~~~~~~~~~~~l~~-~gl~i~~~~~~-~ 84 (257)
T 3lmz_A 18 FHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFH-LP----------LNSTDEQIRAFHDKCAA-HKVTGYAVGPI-Y 84 (257)
T ss_dssp SEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTTT-SC----------TTCCHHHHHHHHHHHHH-TTCEEEEEEEE-E
T ss_pred eEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEeccc-CC----------CCCCHHHHHHHHHHHHH-cCCeEEEEecc-c
Confidence 456777665544467778888899999999998541 00 11246666777666655 36655432111 1
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE-ec-----CCCCHH
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII-NG-----GIKTKK 199 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~-nG-----gI~s~~ 199 (311)
. ...+.+.+.++.+.+.|+..|++|+.. ..|+.+.++.+.. .+.+.. |- -+.|++
T Consensus 85 ~--~~~~~~~~~i~~A~~lGa~~v~~~p~~----------------~~l~~l~~~a~~~-gv~l~lEn~~~~~~~~~~~~ 145 (257)
T 3lmz_A 85 M--KSEEEIDRAFDYAKRVGVKLIVGVPNY----------------ELLPYVDKKVKEY-DFHYAIHLHGPDIKTYPDAT 145 (257)
T ss_dssp E--CSHHHHHHHHHHHHHHTCSEEEEEECG----------------GGHHHHHHHHHHH-TCEEEEECCCTTCSSSCSHH
T ss_pred c--CCHHHHHHHHHHHHHhCCCEEEecCCH----------------HHHHHHHHHHHHc-CCEEEEecCCCcccccCCHH
Confidence 1 234456778888899999999998532 2566666666654 455432 21 246788
Q ss_pred HHHHHHhh
Q psy2386 200 EIDLHLNY 207 (311)
Q Consensus 200 da~~~l~~ 207 (311)
++.++++.
T Consensus 146 ~~~~ll~~ 153 (257)
T 3lmz_A 146 DVWVHTKD 153 (257)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 88888753
No 366
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.21 E-value=0.52 Score=40.83 Aligned_cols=135 Identities=10% Similarity=0.052 Sum_probs=81.0
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccC---cccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGA---ILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~---~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
++.+|...-....+.++.+.+.++||++|||...-|... ++.. ....+++.+.++.+.+++ .++.++.=.-
T Consensus 11 klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~~- 84 (262)
T 3p6l_A 11 RLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGG----KWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGTGV- 84 (262)
T ss_dssp EEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCG----GGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEEEE-
T ss_pred EEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccc----ccccccccccCCHHHHHHHHHHHHH-cCCeEEEEec-
Confidence 466776655444678888889999999999986543211 1111 112346667777666655 3665543222
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe---c-C-CCCH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---G-G-IKTK 198 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---G-g-I~s~ 198 (311)
..+.. .+.+...++.+.+.|+..|++|+.. ..|+.+.++++.. .+.+..- + - ..|+
T Consensus 85 ~~~~~--~~~~~~~i~~A~~lGa~~v~~~~~~----------------~~~~~l~~~a~~~-gv~l~~En~~~~~~~~~~ 145 (262)
T 3p6l_A 85 YVAEK--SSDWEKMFKFAKAMDLEFITCEPAL----------------SDWDLVEKLSKQY-NIKISVHNHPQPSDYWKP 145 (262)
T ss_dssp ECCSS--TTHHHHHHHHHHHTTCSEEEECCCG----------------GGHHHHHHHHHHH-TCEEEEECCSSSSSSSSH
T ss_pred cCCcc--HHHHHHHHHHHHHcCCCEEEecCCH----------------HHHHHHHHHHHHh-CCEEEEEeCCCccccCCH
Confidence 12211 2246777888899999999998532 2466666666654 4444321 1 1 2477
Q ss_pred HHHHHHHh
Q psy2386 199 KEIDLHLN 206 (311)
Q Consensus 199 ~da~~~l~ 206 (311)
+++.++++
T Consensus 146 ~~~~~ll~ 153 (262)
T 3p6l_A 146 ENLLKAIS 153 (262)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 78877775
No 367
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=95.20 E-value=0.48 Score=41.93 Aligned_cols=146 Identities=15% Similarity=0.160 Sum_probs=82.4
Q ss_pred CCCeEEEecCC-CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc-ccce----eE
Q psy2386 45 EHPIAFQVGDN-EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEID----IT 118 (311)
Q Consensus 45 ~~p~~~Ql~g~-~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~-~~~p----vs 118 (311)
+.+++.=+-=. -|+..+.+++.+.++|+|.|.+|.. |+ ++-+...++...+. .+.| |+
T Consensus 78 g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~~-----------~G-----~~~~~~a~~~~~~~g~~~~~li~Vt 141 (255)
T 3ldv_A 78 GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHAS-----------GG-----ERMMAASREILEPYGKERPLLIGVT 141 (255)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG-----------GC-----HHHHHHHHHHHGGGGGGSCEEEEEC
T ss_pred CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEecc-----------CC-----HHHHHHHHHHHhhcCCCCceEEEEE
Confidence 56677666544 4677777888888999999999932 22 23344444444332 1222 33
Q ss_pred EEEecc---CC----CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE
Q psy2386 119 VKHRIG---ID----DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII 191 (311)
Q Consensus 119 vKiR~g---~~----~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~ 191 (311)
+-+... |. .....+....+++...++|++.+.+.+. .+..+++.++.-.++.
T Consensus 142 vLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa~---------------------e~~~iR~~~g~~fl~V 200 (255)
T 3ldv_A 142 VLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQ---------------------EASLLKQHLGREFKLV 200 (255)
T ss_dssp SCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCHH---------------------HHHHHHHHHCTTSEEE
T ss_pred EEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECHH---------------------HHHHHHHhcCCCcEEE
Confidence 322221 00 0111233556777777889999876432 2455555543333556
Q ss_pred ecCCCCHH-H---------HHHHHhh-cCEEEEehhhhhCCcchHHh
Q psy2386 192 NGGIKTKK-E---------IDLHLNY-IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 192 nGgI~s~~-d---------a~~~l~~-adgVmigRa~l~~P~i~~~~ 227 (311)
..||+-.. + ..++++. +|.+.+||+++..+.....+
T Consensus 201 tPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~ 247 (255)
T 3ldv_A 201 TPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVL 247 (255)
T ss_dssp EECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHH
T ss_pred eCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHH
Confidence 66664211 1 2334444 99999999998876644433
No 368
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=95.19 E-value=0.045 Score=50.06 Aligned_cols=61 Identities=11% Similarity=0.031 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc----c---cCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI----L---MTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~----L---l~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
.+++...+-|+...+.|+|.||||+-.--| |+. . ....+.+..+++++++..++|+||-..
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrP-------ga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~ 113 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNP-------FVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTS 113 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCT-------TC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCC-------CcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCC
Confidence 467777777777778899999999532222 222 1 233456777888888878999999754
No 369
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.18 E-value=0.13 Score=46.68 Aligned_cols=166 Identities=13% Similarity=0.065 Sum_probs=96.5
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEecc-CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI 128 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~-gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~ 128 (311)
+=+...|+- .|++++++|||.|=+-- ++-. + .-|+-...+-..+.+...++.|.+.+++||.+-+-.|+-+
T Consensus 25 ~~~~a~D~~----sA~l~e~aGf~ai~vs~~s~a~--~-~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~- 96 (298)
T 3eoo_A 25 QVVGAITAY----AAKMAEAVGFKAVYLSGGGVAA--N-SLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGG- 96 (298)
T ss_dssp EEEECSSHH----HHHHHHHHTCSCEEECHHHHHH--H-TTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSS-
T ss_pred EEecCCCHH----HHHHHHHcCCCEEEECcHHHHH--H-hcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCC-
Confidence 334555654 45677888999988752 1110 0 1122223334566777777888888899999999999742
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEecCccc-cccCCCCcCCCCCcCcH-HHHHHHH---HhC--CCCeEEEecCCCCHHHH
Q psy2386 129 NSYDFVRDFVGTVSSAGCRTFIVHARNAF-LKKLNPKQNRKIPILKY-NFVYNLK---KDF--PELEIIINGGIKTKKEI 201 (311)
Q Consensus 129 ~~~~~~~e~~~~l~~~G~~~itvh~Rt~~-~~G~~g~~~~~~~~~~~-~~i~~i~---~~~--~~ipvi~nGgI~s~~da 201 (311)
.+...+.++.++++|+++|.+-+.... .-|..+. ....+. +.+.+|+ ++. +++-|++=-|-...+.+
T Consensus 97 --~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~g----k~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gl 170 (298)
T 3eoo_A 97 --AFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPG----KECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGI 170 (298)
T ss_dssp --HHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCC----CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHH
T ss_pred --HHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCC----CeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCH
Confidence 335678899999999999999876521 1121111 111232 3455553 332 24555555555533333
Q ss_pred HHHH-------hh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 202 DLHL-------NY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 202 ~~~l-------~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
.+.+ +. ||+|++=- +.++..++++.+.+
T Consensus 171 deai~Ra~ay~~AGAD~if~~~--~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 171 DAAIERAIAYVEAGADMIFPEA--MKTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC--CCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhHhcCCCEEEeCC--CCCHHHHHHHHHHc
Confidence 3333 22 99999831 24666666666554
No 370
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.18 E-value=0.041 Score=53.33 Aligned_cols=69 Identities=17% Similarity=0.316 Sum_probs=55.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVM 212 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVm 212 (311)
..+.+..+.++|++.|.+|.-. |+. ...|+.++++++.+|++||+. |++.+++++..+.+. +|+|.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~----G~~--------~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G~d~I~ 304 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAH----GHS--------RRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAGADAVK 304 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC----CSS--------HHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecC----Cch--------HHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcCCCEEE
Confidence 4678889999999999997542 210 126789999999987799877 789999999888876 99999
Q ss_pred Eeh
Q psy2386 213 LGR 215 (311)
Q Consensus 213 igR 215 (311)
+|-
T Consensus 305 v~~ 307 (494)
T 1vrd_A 305 VGV 307 (494)
T ss_dssp ECS
T ss_pred EcC
Confidence 953
No 371
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.18 E-value=0.34 Score=40.94 Aligned_cols=122 Identities=13% Similarity=0.087 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc-ccceeEEEEeccCCCCCcHHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS-VEIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~-~~~pvsvKiR~g~~~~~~~~~ 133 (311)
.+.++..+.++.+. .|+|.|++.. |.. .. .| .++++++|+. .+.||.+-.-.. +.
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~--p~~--~~--~g----------~~~i~~ir~~~~~~~i~~~~~~~-~~------ 65 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGT--PFL--IR--EG----------VNAIKAIKEKYPHKEVLADAKIM-DG------ 65 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECH--HHH--HH--HT----------THHHHHHHHHCTTSEEEEEEEEC-SC------
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCc--HHH--Hh--cc----------HHHHHHHHHhCCCCEEEEEEEec-cc------
Confidence 45666666666554 4789999876 542 11 12 2567777776 478875532221 11
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcH-HHHHHHHHhCCCCeEEEe-cCCCCH-HHHHHHHhh-cC
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY-NFVYNLKKDFPELEIIIN-GGIKTK-KEIDLHLNY-ID 209 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~-~~i~~i~~~~~~ipvi~n-GgI~s~-~da~~~l~~-ad 209 (311)
...+++.+.++|+|.+++|.-.. ..+. +.+..+++. .++++.. =...++ +.+..+.+. +|
T Consensus 66 ~~~~~~~~~~~Gad~v~v~~~~~--------------~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d 129 (211)
T 3f4w_A 66 GHFESQLLFDAGADYVTVLGVTD--------------VLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGAD 129 (211)
T ss_dssp HHHHHHHHHHTTCSEEEEETTSC--------------HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHhcCCCEEEEeCCCC--------------hhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCC
Confidence 12458889999999999996631 0122 344444443 4666541 235565 446666665 99
Q ss_pred EEEEehh
Q psy2386 210 GVMLGRE 216 (311)
Q Consensus 210 gVmigRa 216 (311)
.|.+..|
T Consensus 130 ~i~v~~g 136 (211)
T 3f4w_A 130 MLAVHTG 136 (211)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9887544
No 372
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.17 E-value=0.079 Score=50.12 Aligned_cols=66 Identities=14% Similarity=0.316 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
.+.++.+.++|++.|.+.... |.+ ....+.++++++.+ ++||++ |+|.|+++++.+.+. ||+|.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~----G~~--------~~~~e~I~~ik~~~-~i~Vi~-g~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH----GHS--------LNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC----CSB--------HHHHHHHHHHHTTC-CCEEEE-EEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCC----CCc--------ccHHHHHHHHHhcC-CCeEEE-eecCCHHHHHHHHHcCCCEEEE
Confidence 477899999999999874221 110 01357889999887 799886 789999999999887 999999
Q ss_pred e
Q psy2386 214 G 214 (311)
Q Consensus 214 g 214 (311)
|
T Consensus 212 G 212 (400)
T 3ffs_A 212 G 212 (400)
T ss_dssp C
T ss_pred e
Confidence 6
No 373
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=95.17 E-value=0.056 Score=48.81 Aligned_cols=94 Identities=16% Similarity=0.242 Sum_probs=61.5
Q ss_pred HHHHHHHhcccc--ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcH-HHHHH
Q psy2386 103 SDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY-NFVYN 179 (311)
Q Consensus 103 ~~iv~~v~~~~~--~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~-~~i~~ 179 (311)
.+.++++|+..+ .++.|-++ + .+-++.+.++|+|.|-++.-+. .++ +.++.
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~-------t----leea~eA~~aGaD~I~LDn~~~---------------e~l~~av~~ 233 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE-------N----LEDALRAVEAGADIVMLDNLSP---------------EEVKDISRR 233 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES-------S----HHHHHHHHHTTCSEEEEESCCH---------------HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEeC-------C----HHHHHHHHHcCCCEEEECCCCH---------------HHHHHHHHH
Confidence 345566666542 34555322 1 2445566779999999886431 122 33444
Q ss_pred HHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcc
Q psy2386 180 LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFL 223 (311)
Q Consensus 180 i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i 223 (311)
++...+++|+.++||| +++.+.++.+. +|++.+|+....-|++
T Consensus 234 l~~~~~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 234 IKDINPNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp HHHHCTTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCCCC
T ss_pred hhccCCCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCc
Confidence 4443457999999999 46888888776 9999999987766653
No 374
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.15 E-value=0.42 Score=42.78 Aligned_cols=139 Identities=14% Similarity=0.102 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccC----------CCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCG----------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~g----------CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
..+.+....+.+++.|...+-==+- ++.-+ -||..+++.+++.++-+ +++||.+|.-..-
T Consensus 87 g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~k-----Igs~~~~n~~ll~~~a~-----~~kPV~lk~G~~~ 156 (276)
T 1vs1_A 87 GLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQ-----IGARNMQNFPLLREVGR-----SGKPVLLKRGFGN 156 (276)
T ss_dssp THHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEE-----ECGGGTTCHHHHHHHHH-----HTCCEEEECCTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEE-----ECcccccCHHHHHHHHc-----cCCeEEEcCCCCC
Confidence 4688888888888888765432111 44433 68889999999877652 5899999865421
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCE-EEEe-cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe-c---CCCC--
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRT-FIVH-ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN-G---GIKT-- 197 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~-itvh-~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n-G---gI~s-- 197 (311)
+.++....+..+.+.|... +.+| |-+. +.+| ....+|+..+..+++.+ ++||++. . |.+.
T Consensus 157 ----t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~-yp~y------~~~~vdl~~i~~lk~~~-~lpVi~dssH~~g~~~~~ 224 (276)
T 1vs1_A 157 ----TVEELLAAAEYILLEGNWQVVLVERGIRT-FEPS------TRFTLDVAAVAVLKEAT-HLPVIVDPSHPAGRRSLV 224 (276)
T ss_dssp ----CHHHHHHHHHHHHHTTCCCEEEEECCBCC-SCCS------SSSBCBHHHHHHHHHHB-SSCEEECCHHHHCSGGGH
T ss_pred ----CHHHHHHHHHHHHHcCCCeEEEEeCCcCC-CCCc------CcchhCHHHHHHHHHHh-CCCEEEeCCCCCCccchH
Confidence 2335667777788999854 4556 4321 3232 12347899899999987 7998752 2 3332
Q ss_pred HHHHHHHHhh-cCEEEEehh
Q psy2386 198 KKEIDLHLNY-IDGVMLGRE 216 (311)
Q Consensus 198 ~~da~~~l~~-adgVmigRa 216 (311)
.+-+...... +||+||=+=
T Consensus 225 ~~~~~aAva~Ga~Gl~IE~H 244 (276)
T 1vs1_A 225 PALAKAGLAAGADGLIVEVH 244 (276)
T ss_dssp HHHHHHHHHTTCSEEEEEBC
T ss_pred HHHHHHHHHcCCCEEEEEec
Confidence 2323333444 999999754
No 375
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=95.13 E-value=1 Score=39.72 Aligned_cols=96 Identities=17% Similarity=0.141 Sum_probs=72.4
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccC
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGI 125 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~ 125 (311)
.+++.|.+.+.+++...++.+.+.|+|.||+=.=+ +.. ..+.+.+.+.+..+++.+ ++|+.+=+|.-|
T Consensus 21 ~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~---------l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~ 89 (257)
T 2yr1_A 21 CICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADF---------FRA--IDDQERVLATANGLRNIAGEIPILFTIRSER 89 (257)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGG---------CTT--TTCHHHHHHHHHHHHHHSSSCCEEEECCCTT
T ss_pred EEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeec---------ccc--cCcHHHHHHHHHHHHHhccCCCEEEEEeecc
Confidence 48899999999998888888888899999995322 100 124578888999999887 889999999755
Q ss_pred CCC----CcHHHHHHHHHHHHHcC-CCEEEEec
Q psy2386 126 DDI----NSYDFVRDFVGTVSSAG-CRTFIVHA 153 (311)
Q Consensus 126 ~~~----~~~~~~~e~~~~l~~~G-~~~itvh~ 153 (311)
..+ .+.+...++.+.+.+.| +++|.|.-
T Consensus 90 eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl 122 (257)
T 2yr1_A 90 EGGQPIPLNEAEVRRLIEAICRSGAIDLVDYEL 122 (257)
T ss_dssp TTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEG
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 422 22345678888888888 99999864
No 376
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=95.10 E-value=0.18 Score=45.65 Aligned_cols=169 Identities=14% Similarity=0.128 Sum_probs=92.9
Q ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEec-cCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCc
Q psy2386 52 VGDNEPKKLAKSAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINS 130 (311)
Q Consensus 52 l~g~~~~~~~~aa~~~~~~g~d~IdiN-~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~ 130 (311)
+...|+- .|++++++|||.|=+- .++-.. -|+-....-..+.+...+++|.+.+++||.+-+-.|+-+
T Consensus 24 ~~a~D~~----sA~~~~~aG~~ai~vsg~~~a~~----lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~--- 92 (295)
T 1s2w_A 24 MEAHNGL----SARIVQEAGFKGIWGSGLSVSAQ----LGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGN--- 92 (295)
T ss_dssp EEECSHH----HHHHHHHHTCSCEEECCHHHHHT----C---------CHHHHHHHHHHHHTCSSCEEEECCSSCSS---
T ss_pred ecCCCHH----HHHHHHHcCCCEEEeChHHHHHh----CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCC---
Confidence 5555654 4677788899999776 222211 122222334556677778888888899999999999643
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCcc-ccccCCCCcCCCCCcCc--HHHHHHHHHhC--CCCeEEEecCCC-C---HHHH
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNA-FLKKLNPKQNRKIPILK--YNFVYNLKKDF--PELEIIINGGIK-T---KKEI 201 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~-~~~G~~g~~~~~~~~~~--~~~i~~i~~~~--~~ipvi~nGgI~-s---~~da 201 (311)
.+...+.++.+.++|+++|.+-+... .--|+-|......-|.+ .+.|+.++++. +++-|++--|-. . .+++
T Consensus 93 ~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~a 172 (295)
T 1s2w_A 93 FNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEA 172 (295)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHH
Confidence 23577889999999999999986642 01121110000111111 23444444443 245566655554 1 2444
Q ss_pred H----HHHhh-cCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 202 D----LHLNY-IDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 202 ~----~~l~~-adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
. .+.+. ||+|.+=- ...++..++++.+.+.
T Consensus 173 i~Ra~ay~eAGAd~i~~e~-~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 173 LKRAEAYRNAGADAILMHS-KKADPSDIEAFMKAWN 207 (295)
T ss_dssp HHHHHHHHHTTCSEEEECC-CSSSSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEcC-CCCCHHHHHHHHHHcC
Confidence 3 33333 99999931 1234556666666543
No 377
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.08 E-value=0.25 Score=44.78 Aligned_cols=98 Identities=19% Similarity=0.153 Sum_probs=67.8
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDIN 129 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~ 129 (311)
+=+...|+- .|++++++|||.|=+--+ ....+ .-|+-....-..+.+...+++|.+.++.||++-+-.|+-..
T Consensus 20 ~~~~a~D~~----sA~~~~~aG~~ai~vs~~-~~a~~-~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~- 92 (295)
T 1xg4_A 20 QIVGTINAN----HALLAQRAGYQAIYLSGG-GVAAG-SLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSS- 92 (295)
T ss_dssp EEEECSSHH----HHHHHHHTTCSCEEECHH-HHHHT-TTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSS-
T ss_pred EEecCcCHH----HHHHHHHcCCCEEEECch-Hhhhh-hcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCC-
Confidence 335556654 467888899999877521 11111 11333334456677788888888888999999999985422
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEecCc
Q psy2386 130 SYDFVRDFVGTVSSAGCRTFIVHARN 155 (311)
Q Consensus 130 ~~~~~~e~~~~l~~~G~~~itvh~Rt 155 (311)
.+...+.++.+.++|+++|.+-+..
T Consensus 93 -~~~~~~~v~~l~~aGa~gv~iEd~~ 117 (295)
T 1xg4_A 93 -AFNVARTVKSMIKAGAAGLHIEDQV 117 (295)
T ss_dssp -HHHHHHHHHHHHHHTCSEEEEECBC
T ss_pred -HHHHHHHHHHHHHcCCeEEEECCCC
Confidence 3357788999999999999998664
No 378
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=95.06 E-value=0.94 Score=40.00 Aligned_cols=139 Identities=13% Similarity=0.110 Sum_probs=78.8
Q ss_pred CCCCeEEEec-CCCHHHHHHHHHHHH-HcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 44 EEHPIAFQVG-DNEPKKLAKSAKIIQ-KWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~-g~~~~~~~~aa~~~~-~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
.+.+++.=+- +.-|+....+++.+. ++|+|.|.+|. +|+ .++++...+..+.-|+|=+
T Consensus 75 ~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~-----------~~G---------~~~l~~~~~~~~~gv~vL~ 134 (255)
T 3qw3_A 75 AGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP-----------YMG---------SDSLQPFMRYPDKAVFVLC 134 (255)
T ss_dssp TTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECC-----------TTC---------HHHHHHHHTCTTSEEEEEE
T ss_pred CCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcc-----------cCC---------HHHHHHHHHhhCCceEEEE
Confidence 4667777765 444677777777664 69999999982 222 1333443333333444444
Q ss_pred eccCCC----CC------c-HHHHHHHHHH-HHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeE
Q psy2386 122 RIGIDD----IN------S-YDFVRDFVGT-VSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEI 189 (311)
Q Consensus 122 R~g~~~----~~------~-~~~~~e~~~~-l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipv 189 (311)
++.... .+ + ++...+.++. ..+.|.+.+.+.+.. -+.+..+++.+++.++
T Consensus 135 ~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~at~------------------~~e~~~ir~~~~~~~~ 196 (255)
T 3qw3_A 135 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATD------------------PVALARVRARAPTLWF 196 (255)
T ss_dssp ECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEECSSC------------------HHHHHHHHHHCSSCCE
T ss_pred eCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEECCCC------------------HHHHHHHHHHCCCCeE
Confidence 432211 11 1 2334444444 445888888774332 1346777877766665
Q ss_pred EEec-CC--CCHHHHHHHHhhcC----E--EEEehhhhhCCc
Q psy2386 190 IING-GI--KTKKEIDLHLNYID----G--VMLGREAYKNPF 222 (311)
Q Consensus 190 i~nG-gI--~s~~da~~~l~~ad----g--VmigRa~l~~P~ 222 (311)
+.-| +. .|++++.+. .+| + +.+||+++.-+.
T Consensus 197 l~PGIg~qg~tp~~a~~~--G~d~~~~~~livvGR~I~~A~d 236 (255)
T 3qw3_A 197 LVPGIGAQGGSLKASLDA--GLRADGSGMLINVSRGLARAAD 236 (255)
T ss_dssp EECCC-----CHHHHHHH--HCCTTSCCEEEEESHHHHTSSC
T ss_pred EECCcCCCCCCHHHHHHc--CCCcccCeeEEEeChhhcCCCC
Confidence 5433 22 166665542 366 5 999999987544
No 379
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=95.05 E-value=0.29 Score=45.53 Aligned_cols=99 Identities=12% Similarity=0.040 Sum_probs=71.4
Q ss_pred CChHHHHHHHHHHhccccceeEEEEeccCCCC---CcH--------------------------HHHHHHHHHHHHcCCC
Q psy2386 97 TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI---NSY--------------------------DFVRDFVGTVSSAGCR 147 (311)
Q Consensus 97 ~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~---~~~--------------------------~~~~e~~~~l~~~G~~ 147 (311)
.+++.+.+.++.+++.++.|+.|.+-...... ... ..+.+.++.+.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 46888889999999888788888764322210 000 0135667788899999
Q ss_pred EEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE-eh
Q psy2386 148 TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 215 (311)
Q Consensus 148 ~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi-gR 215 (311)
.|.+|... ..++.++++++. +++|+. .+.|++++....+. +|+|.+ |+
T Consensus 125 ~V~~~~g~----------------~~~~~i~~~~~~--g~~v~~--~v~t~~~a~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 125 VVSFHFGV----------------PDREVIARLRRA--GTLTLV--TATTPEEARAVEAAGADAVIAQGV 174 (369)
T ss_dssp EEEEESSC----------------CCHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred EEEEeCCC----------------CcHHHHHHHHHC--CCeEEE--ECCCHHHHHHHHHcCCCEEEEeCC
Confidence 99998653 246788888874 688776 57899999888766 999999 65
No 380
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=94.98 E-value=0.16 Score=45.49 Aligned_cols=164 Identities=12% Similarity=0.123 Sum_probs=97.9
Q ss_pred EEEecCCCHHHHHHHHHHHHHcCCCEEEec-cCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCC
Q psy2386 49 AFQVGDNEPKKLAKSAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD 127 (311)
Q Consensus 49 ~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN-~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~ 127 (311)
++=+...|.- .|++++++|||.|=+- .+.-. .-|+-....-..+.+...++.|.+.++.||++-+-.|+-.
T Consensus 18 i~~~~a~D~~----sA~~~~~aG~~ai~vsg~s~a~----~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~ 89 (275)
T 2ze3_A 18 FLLPNAWDVA----SARLLEAAGFTAIGTTSAGIAH----ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGH 89 (275)
T ss_dssp EEECEESSHH----HHHHHHHHTCSCEEECHHHHHH----HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSS
T ss_pred eeEecccCHH----HHHHHHHcCCCEEEECcHHHHH----hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCC
Confidence 3334445544 4677888999999876 22211 1234444455677788888888888899999999999542
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc--HHHHHHHHHhCC--CCeEEEecCCCC------
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK--YNFVYNLKKDFP--ELEIIINGGIKT------ 197 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~--~~~i~~i~~~~~--~ipvi~nGgI~s------ 197 (311)
. .++..+.++.+.++|+++|.+-+... . .|+. .-+.+ .+.|+.+++... .+|+..+|-..+
T Consensus 90 ~--~~~~~~~v~~l~~aGaagv~iED~~~-~---~~k~---l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g 160 (275)
T 2ze3_A 90 A--PEDVRRTVEHFAALGVAGVNLEDATG-L---TPTE---LYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHG 160 (275)
T ss_dssp S--HHHHHHHHHHHHHTTCSEEEEECBCS-S---SSSC---BCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCS
T ss_pred C--HHHHHHHHHHHHHcCCcEEEECCCcC-C---CCCc---cCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhcccc
Confidence 2 33567889999999999999987642 1 1111 11111 233444444411 366666664333
Q ss_pred --H-HHHHHHH-------hh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 198 --K-KEIDLHL-------NY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 198 --~-~da~~~l-------~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+ +.+.+.+ +. ||+|.+=- +.++...+++.+.+
T Consensus 161 ~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~--~~~~~~~~~i~~~~ 203 (275)
T 2ze3_A 161 ATDEERLAETVRRGQAYADAGADGIFVPL--ALQSQDIRALADAL 203 (275)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCSEEECTT--CCCHHHHHHHHHHC
T ss_pred ccchhhHHHHHHHHHHHHHCCCCEEEECC--CCCHHHHHHHHHhc
Confidence 1 2233333 22 99998832 34445677776654
No 381
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=94.97 E-value=0.4 Score=41.68 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=77.5
Q ss_pred HHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHH
Q psy2386 64 AKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSS 143 (311)
Q Consensus 64 a~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~ 143 (311)
+..+.++|+|.|-|+.+.-- . ....+.+.++...+. +.-+.| -+| ++ .+. +.+..
T Consensus 78 ~~~l~~~Ga~~VllghseRR-----~--------~~~e~~~k~~~A~~~-GL~~iv--cVg----e~----~e~-~~~~~ 132 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAP-----L--------KLNDLARLVAKAKSL-GLDVVV--CAP----DP----RTS-LAAAA 132 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSC-----C--------BHHHHHHHHHHHHHT-TCEEEE--EES----SH----HHH-HHHHH
T ss_pred HHHHHHcCCCEEEEeeeecc-----C--------CHHHHHHHHHHHHHC-CCEEEE--EeC----CH----HHH-HHHhc
Confidence 34567889999999855411 0 111244444444442 443333 333 11 121 44567
Q ss_pred cCCCEEEEecCccccccCCCCcCCCCCcCcHHHHH---H-HHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhh
Q psy2386 144 AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVY---N-LKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAY 218 (311)
Q Consensus 144 ~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~---~-i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l 218 (311)
.+.+.|-+-+|.. -| +|. ....+.-+.+. + +++..++++|++-|+|.+.+++..+... +||+.||++++
T Consensus 133 ~~~~iIayep~wa--iG-tG~---~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l 206 (226)
T 1w0m_A 133 LGPHAVAVEPPEL--IG-TGR---AVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAV 206 (226)
T ss_dssp TCCSEEEECCGGG--TT-TSC---CHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCEEEEcChhh--hc-cCC---CCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHH
Confidence 7888888888753 33 110 00012233222 2 2232336899999999999999988876 99999999998
Q ss_pred hCCcchHH
Q psy2386 219 KNPFLMSN 226 (311)
Q Consensus 219 ~~P~i~~~ 226 (311)
.-+.+..-
T Consensus 207 ~a~~~~~~ 214 (226)
T 1w0m_A 207 KAKDPYAK 214 (226)
T ss_dssp TCSSHHHH
T ss_pred CCcCHHHH
Confidence 87664433
No 382
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=94.91 E-value=0.34 Score=43.07 Aligned_cols=141 Identities=16% Similarity=0.098 Sum_probs=87.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEE-ec----------cCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEIN-LN----------CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~Id-iN----------~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
|...+.+....+.+.+.|...+- +. . ++.- .-||..+++.+++.++.+ +++||.+|.-
T Consensus 70 g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~-----kIga~~~~n~~ll~~~a~-----~~kPV~lk~G 138 (262)
T 1zco_A 70 GYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDIL-----QIGARNSQNFELLKEVGK-----VENPVLLKRG 138 (262)
T ss_dssp CCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEE-----EECGGGTTCHHHHHHHTT-----SSSCEEEECC
T ss_pred CccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEE-----EECcccccCHHHHHHHHh-----cCCcEEEecC
Confidence 44477888888888888765432 21 1 3333 357888899888776543 6899999865
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEE-ecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCC-CH--
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIV-HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK-TK-- 198 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itv-h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~-s~-- 198 (311)
..- +.++..+.+..+...|...+++ |-......+| .....|+..+..+++.+ ++||++.-+=. +.
T Consensus 139 ~~~----t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y------~~~~v~L~ai~~lk~~~-~~pVi~d~sH~~g~~~ 207 (262)
T 1zco_A 139 MGN----TIQELLYSAEYIMAQGNENVILCERGIRTFETA------TRFTLDISAVPVVKELS-HLPIIVDPSHPAGRRS 207 (262)
T ss_dssp TTC----CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS------SSSBCCTTHHHHHHHHB-SSCEEECSSTTTCSGG
T ss_pred CCC----CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc------ChhhcCHHHHHHHHhhh-CCCEEEEcCCCCCccc
Confidence 421 2345677788888999865554 5211112233 22346778888999886 79986643322 11
Q ss_pred ---HHHHHHHhh-cCEEEEehh
Q psy2386 199 ---KEIDLHLNY-IDGVMLGRE 216 (311)
Q Consensus 199 ---~da~~~l~~-adgVmigRa 216 (311)
.-+...... ++|+||=+=
T Consensus 208 ~v~~~~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 208 LVIPLAKAAYAIGADGIMVEVH 229 (262)
T ss_dssp GHHHHHHHHHHTTCSEEEEEBC
T ss_pred hHHHHHHHHHHcCCCEEEEEec
Confidence 223333333 999999754
No 383
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.90 E-value=0.24 Score=44.98 Aligned_cols=127 Identities=8% Similarity=0.087 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++ +.-|-+..-..+.-.++++.+++.+ .+||.+-+ |.. +.+
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~----------GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~~---~t~ 96 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQ----------GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS--GCE---STQ 96 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEES----------SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec--CCC---CHH
Confidence 377888888888888999999887 2234444445555577788877766 57877743 322 234
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccc-cCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLK-KLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~-G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+|++.+..-.. +. ..+. ..-+++.++|.++. ++||+ +| |=--+++.+.++.
T Consensus 97 ~ai~la~~A~~~Gadavlv~~P~y-~~~~~s~-------~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 167 (307)
T 3s5o_A 97 ATVEMTVSMAQVGADAAMVVTPCY-YRGRMSS-------AALIHHYTKVADLS-PIPVVLYSVPANTGLDLPVDAVVTLS 167 (307)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCT-TGGGCCH-------HHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCc-CCCCCCH-------HHHHHHHHHHHhhc-CCCEEEEeCCcccCCCCCHHHHHHHh
Confidence 678999999999999998753321 00 0000 01245566666666 57764 44 2224555555554
No 384
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.88 E-value=0.32 Score=43.72 Aligned_cols=124 Identities=14% Similarity=0.051 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~ 134 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+++.++- |.+ -.|-.. .++.
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~g-Via--Gvg~~~---t~~a 80 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNG----------TTGLGPALSKDEKRQNLNALYDVTHK-LIF--QVGSLN---LNDV 80 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHTTTCSC-EEE--ECCCSC---HHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-eEE--eeCCCC---HHHH
Confidence 4788899999988889999998872 23444444566667888888887754 444 333222 3467
Q ss_pred HHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHHH
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDLH 204 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~~ 204 (311)
+++++.+++.|+|++.+..-. +.. .+ ...-+++.++++++. ++||+ +| -|+ -+++.+.++
T Consensus 81 i~la~~A~~~Gadavlv~~P~--y~~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSSHSPY--YFPRLP-------EKFLAKYYEEIARIS-SHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHHHHHTSCCSEEEECCCC--SSCSCC-------HHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHHHHHhcCCCEEEEcCCc--CCCCCC-------HHHHHHHHHHHHHhc-CCCEEEEECchHhCcCCCHHHHhcc
Confidence 899999999999999886432 111 11 011246677888887 68975 45 243 455555443
No 385
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=94.84 E-value=0.53 Score=40.18 Aligned_cols=175 Identities=11% Similarity=0.127 Sum_probs=97.3
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecce--eccccc-CCchhccccCCCCCCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEe
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMF--TTQAIL-GNKKHCLDFNAEEHPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINL 77 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv--~a~~l~-~~~~~~l~~~~~~~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~Idi 77 (311)
|+|+..==..+.+.|+..+-|- +. |.+.+- .....+...-+ ..+..|-+|- .+++.+. +++...+.|.|.|
T Consensus 8 Git~~eda~~a~~~GaD~iGfi-f~~~SpR~V~~~~a~~i~~~~~-~~~~~VgVfvn~~~~~i~---~~~~~~~ld~vQL 82 (205)
T 1nsj_A 8 GITNLEDALFSVESGADAVGFV-FYPKSKRYISPEDARRISVELP-PFVFRVGVFVNEEPEKIL---DVASYVQLNAVQL 82 (205)
T ss_dssp CCCSHHHHHHHHHHTCSEEEEE-CCTTCTTBCCHHHHHHHHHHSC-SSSEEEEEESSCCHHHHH---HHHHHHTCSEEEE
T ss_pred CCCcHHHHHHHHHcCCCEEEEE-ecCCCCCcCCHHHHHHHHHhCC-CCCCEEEEEeCCCHHHHH---HHHHhhCCCEEEE
Confidence 5666666677778885322222 21 222221 11111222112 2233344444 4565554 4455778999999
Q ss_pred ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy2386 78 NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF 157 (311)
Q Consensus 78 N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~ 157 (311)
| |. .+|+.+.+ +++ ++|+.--+++. +. .++ ..+.+..+|++.+.+...
T Consensus 83 H-------------G~---e~~~~~~~----l~~--~~~vika~~v~--~~------~~l-~~~~~~~~d~~LlD~~~~- 130 (205)
T 1nsj_A 83 H-------------GE---EPIELCRK----IAE--RILVIKAVGVS--NE------RDM-ERALNYREFPILLDTKTP- 130 (205)
T ss_dssp C-------------SC---CCHHHHHH----HHT--TSEEEEEEEES--SH------HHH-HHHGGGTTSCEEEEESCS-
T ss_pred C-------------CC---CCHHHHHH----Hhc--CCCEEEEEEcC--CH------HHH-HHHHHcCCCEEEECCCCC-
Confidence 9 11 34555433 332 36776556653 11 122 223444489998875532
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCc
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPF 222 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~ 222 (311)
..|-+|+ ..||+.+..++ .. +.|++..||+ +++.+.+.+.. ++||=+.+|.-..|-
T Consensus 131 ~~GGtG~------~fdw~~l~~~~-~~-~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG 188 (205)
T 1nsj_A 131 EYGGSGK------TFDWSLILPYR-DR-FRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPG 188 (205)
T ss_dssp SSSSCCS------CCCGGGTGGGG-GG-SSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETT
T ss_pred CCCCCCC------ccCHHHHHhhh-cC-CCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCCC
Confidence 1232333 47998876543 22 5799999999 56788777764 999999999864443
No 386
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.84 E-value=0.082 Score=47.98 Aligned_cols=86 Identities=8% Similarity=0.013 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCCEEEEecCc----cccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cC
Q psy2386 135 RDFVGTVSSAGCRTFIVHARN----AFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-ID 209 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt----~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-ad 209 (311)
.+.++.++++|++.|.+--+. ...+|.. ...+.++|+++++.+ ++||++-+++...++++.+.+. ||
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~-------R~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD 102 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGVA-------RSVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVD 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCCC-------CCCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCcc-------cCCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCC
Confidence 478999999999999886221 1122211 124789999999998 8999998888888888888766 99
Q ss_pred EEEEehhhhhCCcchHHhHh
Q psy2386 210 GVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 210 gVmigRa~l~~P~i~~~~~~ 229 (311)
.| -....+..+.+...+.+
T Consensus 103 ~I-d~s~~~~~~~li~~i~~ 121 (297)
T 4adt_A 103 ML-DESEVLTMADEYNHINK 121 (297)
T ss_dssp EE-EEETTSCCSCSSCCCCG
T ss_pred EE-EcCCCCCHHHHHHHHHh
Confidence 99 32233455567666665
No 387
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.83 E-value=0.33 Score=43.53 Aligned_cols=123 Identities=13% Similarity=0.053 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~ 134 (311)
=|.+.+.+-++.+.+.|+|+|=++- ..|-+..-..+.-.++++.+++.++- |.+ -.|-. +.++.
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~--Gvg~~---~t~~a 79 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAG----------TTGLGPALSLQEKMELTDAATSAARR-VIV--QVASL---NADEA 79 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHHHHCSS-EEE--ECCCS---SHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-EEE--eeCCC---CHHHH
Confidence 3778898889988889999998872 23333444555557788888777644 444 33322 23467
Q ss_pred HHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHH
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDL 203 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~ 203 (311)
+++++.+++.|+|++.+..-. |.. .+ ...-+++.++++++. ++||+ +| -|+ -+++.+.+
T Consensus 80 i~la~~A~~~Gadavlv~~P~--y~~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 80 IALAKYAESRGAEAVASLPPY--YFPRLS-------ERQIAKYFRDLCSAV-SIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHHHHHTTCSEEEECCSC--SSTTCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCc--CCCCCC-------HHHHHHHHHHHHHhc-CCCEEEEeChhhcCCCCCHHHHHh
Confidence 899999999999999886432 111 11 011246677888887 68975 45 233 46676666
No 388
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=94.82 E-value=0.15 Score=49.01 Aligned_cols=122 Identities=9% Similarity=0.054 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQK-WGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~-~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~ 132 (311)
.+|+++++.|+...+ .||..|-|..|.+ +++.-.+.++++|++. ++.+.|-..-+|+. +
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~----~ 244 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCWSL----D 244 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBSCH----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCCCH----H
Confidence 579999998887654 6999999986642 1222345667777765 45566665556653 3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc----HHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-
Q psy2386 133 FVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK----YNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY- 207 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~----~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~- 207 (311)
+...+++.+++. +.+|- + ..++-| ++..+++++.. .+||.+.=-+.+..++.++++.
T Consensus 245 ~A~~~~~~L~~~-l~~iE---------------e-P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 306 (455)
T 3pfr_A 245 EAIQLCKGLNDV-LTYAE---------------D-PCIGENGYSGREIMAEFRRRT-GIPTATNMIATNWREMCHAIMLQ 306 (455)
T ss_dssp HHHHHHTTCTTT-CSEEE---------------S-CBCCBTTBCHHHHHHHHHHHH-CCCEEESSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHhhccc-ceeee---------------c-CCChhhccchHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHHcC
Confidence 567788878776 55551 1 111224 67888999887 6998886667889999998875
Q ss_pred -cCEEEE
Q psy2386 208 -IDGVML 213 (311)
Q Consensus 208 -adgVmi 213 (311)
+|.+++
T Consensus 307 a~di~~~ 313 (455)
T 3pfr_A 307 SVDIPLA 313 (455)
T ss_dssp CCSEEBC
T ss_pred CCCEEEe
Confidence 887764
No 389
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.82 E-value=0.6 Score=43.20 Aligned_cols=133 Identities=13% Similarity=0.098 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEe-----------ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINL-----------NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~Idi-----------N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
+-..+.+....+.+++.|...+-- ..++|.-+ -||.-++|..++.++-+ .++||.+|.-
T Consensus 87 ~l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~K-----I~S~~~~n~~LL~~va~-----~gkPviLstG 156 (349)
T 2wqp_A 87 ALNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYK-----IGSGECNNYPLIKLVAS-----FGKPIILSTG 156 (349)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEE-----ECGGGTTCHHHHHHHHT-----TCSCEEEECT
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEE-----ECcccccCHHHHHHHHh-----cCCeEEEECC
Confidence 345677888888888887655422 24577665 47777899998766543 5899999865
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEID 202 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~ 202 (311)
.. +.+++...++.+.+.|.+.+.+|+-+. |.- ....+|+..|..+++.+|++||..++--....-+.
T Consensus 157 ma-----t~~Ei~~Ave~i~~~G~~iiLlhc~s~-Yp~-------~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~ 223 (349)
T 2wqp_A 157 MN-----SIESIKKSVEIIREAGVPYALLHCTNI-YPT-------PYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACL 223 (349)
T ss_dssp TC-----CHHHHHHHHHHHHHHTCCEEEEECCCC-SSC-------CGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHH
T ss_pred CC-----CHHHHHHHHHHHHHcCCCEEEEeccCC-CCC-------ChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHH
Confidence 42 244567777888889998888886432 211 12236889999999987579997765333344444
Q ss_pred HHHhh-cC
Q psy2386 203 LHLNY-ID 209 (311)
Q Consensus 203 ~~l~~-ad 209 (311)
..... ||
T Consensus 224 AAvAlGA~ 231 (349)
T 2wqp_A 224 GAVALGGS 231 (349)
T ss_dssp HHHHHTCC
T ss_pred HHHHhCCC
Confidence 44443 77
No 390
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=94.80 E-value=0.4 Score=42.18 Aligned_cols=106 Identities=19% Similarity=0.162 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCC-----CcHHH
Q psy2386 59 KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI-----NSYDF 133 (311)
Q Consensus 59 ~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~-----~~~~~ 133 (311)
.+.+-.+.|.+.|||.|||+-|+= =+ ..+.-.++++.+++. -+.|+.-.|..+. .+.+.
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i------------~l-~~~~~~~~I~~~~~~---G~~v~~EvG~k~~~~~~~~~~~~ 149 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSS------------DI-SLEERNNAIKRAKDN---GFMVLTEVGKKMPDKDKQLTIDD 149 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSS------------CC-CHHHHHHHHHHHHHT---TCEEEEEECCSSHHHHTTCCHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcc------------cC-CHHHHHHHHHHHHHC---CCEEeeeccccCCcccCCCCHHH
Confidence 344555777899999999995542 12 234445566665554 3566777776554 23456
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccc-cCCCCcCCCCCcCcHHHHHHHHHhC
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLK-KLNPKQNRKIPILKYNFVYNLKKDF 184 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~-G~~g~~~~~~~~~~~~~i~~i~~~~ 184 (311)
.++.++...++||+.|.+-+|..... |+.. ..+....+.+.++.+.+
T Consensus 150 ~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~----~~g~~r~d~v~~i~~~l 197 (251)
T 1qwg_A 150 RIKLINFDLDAGADYVIIEGRESGKGKGLFD----KEGKVKENELDVLAKNV 197 (251)
T ss_dssp HHHHHHHHHHHTCSEEEECCTTTCCSSTTBC----TTSCBCHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCcEEEEeeecccCCcccCC----CCCCCcHHHHHHHHHhC
Confidence 78889999999999999999953111 3211 22346778888887766
No 391
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=94.79 E-value=0.19 Score=45.46 Aligned_cols=140 Identities=16% Similarity=0.142 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEe-------c---cCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCC
Q psy2386 57 PKKLAKSAKIIQKWGYDEINL-------N---CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 126 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~Idi-------N---~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~ 126 (311)
.+.+....+.+++.|...+-= . =.+|.-+ -||..+++.+++.++ . .+++||.+|.-..-+
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~vd~~k-----IgA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~t 144 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVADVVDIIQ-----LPAFLARQTDLVEAM----A-KTGAVINVKKPQFLS 144 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTTCSEEE-----ECGGGTTCHHHHHHH----H-HTTCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhcCCEEE-----ECcccccCHHHHHHH----H-cCCCcEEEeCCCCCC
Confidence 456666666667777544331 0 1344443 688899999966654 3 368999999765322
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe--------------
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN-------------- 192 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n-------------- 192 (311)
. +++...+..+...|...+++.-|...+ +|. ....|+..+..+++.++++||+..
T Consensus 145 ~----~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y~------~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~ 213 (292)
T 1o60_A 145 P----SQMGNIVEKIEECGNDKIILCDRGTNF-GYD------NLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAA 213 (292)
T ss_dssp G----GGHHHHHHHHHHTTCCCEEEEECCEEC-STT------CEECCTTHHHHHHHHTTSCCEEEEHHHHCC--------
T ss_pred H----HHHHHHHHHHHHcCCCeEEEEECCCCC-CCC------ccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccC
Confidence 2 245677888899998766665554322 321 012588888899988656899882
Q ss_pred -cCCCCH--HHHHHHHhh-cCEEEEehhh
Q psy2386 193 -GGIKTK--KEIDLHLNY-IDGVMLGREA 217 (311)
Q Consensus 193 -GgI~s~--~da~~~l~~-adgVmigRa~ 217 (311)
+|.+.. .-+....+. +||+||=+=+
T Consensus 214 ~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 214 SSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp ----CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 232221 222333344 9999997543
No 392
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=94.73 E-value=0.29 Score=45.32 Aligned_cols=139 Identities=15% Similarity=0.129 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccC----------CCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCG----------CPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~g----------CP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
..+.+....+.+++.|...+-==+- ++.- .-||..+++.+++.++- .+++||.+|.-..-
T Consensus 155 g~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~l-----kIgAr~~~n~~LL~~va-----~~~kPVilk~G~~~ 224 (350)
T 1vr6_A 155 GEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADII-----QIGARNAQNFRLLSKAG-----SYNKPVLLKRGFMN 224 (350)
T ss_dssp THHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEE-----EECGGGTTCHHHHHHHH-----TTCSCEEEECCTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEE-----EECcccccCHHHHHHHH-----ccCCcEEEcCCCCC
Confidence 3678888888888888654422111 3433 36888999999977765 36899999865521
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEE--ecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe-c---CCCC--
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIV--HARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN-G---GIKT-- 197 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itv--h~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n-G---gI~s-- 197 (311)
+.+++...+..+.+.|...+++ ||-+. +.+| .....|+..+..+++.+ ++||++. . |-+.
T Consensus 225 ----tl~ei~~Ave~i~~~GN~~viLceRG~~t-yp~~------~~~~vdl~ai~~lk~~~-~lpVi~dssHs~G~~~~v 292 (350)
T 1vr6_A 225 ----TIEEFLLSAEYIANSGNTKIILCERGIRT-FEKA------TRNTLDISAVPIIRKES-HLPILVDPSHSGGRRDLV 292 (350)
T ss_dssp ----CHHHHHHHHHHHHHTTCCCEEEEECCBCC-SCCS------SSSBCCTTHHHHHHHHB-SSCEEECHHHHHCSGGGH
T ss_pred ----CHHHHHHHHHHHHHCCCCeEEEEeCCCCC-CCCc------ChhhhhHHHHHHHHHhh-CCCEEEeCCCCCcccchH
Confidence 2335667777788999866655 33211 2222 12346888899999987 7999762 2 3332
Q ss_pred HHHHHHHHhh-cCEEEEehh
Q psy2386 198 KKEIDLHLNY-IDGVMLGRE 216 (311)
Q Consensus 198 ~~da~~~l~~-adgVmigRa 216 (311)
.+-+...+.. |||+||=+=
T Consensus 293 ~~~a~AAvA~GA~Gl~IE~H 312 (350)
T 1vr6_A 293 IPLSRAAIAVGAHGIIVEVH 312 (350)
T ss_dssp HHHHHHHHHHTCSEEEEEBC
T ss_pred HHHHHHHHHhCCCEEEEEec
Confidence 2333333444 999999754
No 393
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.65 E-value=0.069 Score=48.11 Aligned_cols=60 Identities=18% Similarity=0.180 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc---ccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI---LMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~---Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
+++...+.|+...+.|+|.||||.-..-| |+. .....+.+..+++++++.+++||+|-..
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrP-------ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~ 98 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRP-------GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS 98 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCST-------TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCC
Confidence 46777777777777899999999633211 222 2345677888888888877999999753
No 394
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=94.64 E-value=0.27 Score=44.12 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEec-----------cCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLN-----------CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI 125 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN-----------~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~ 125 (311)
.+.+....+.+.+.|...+-== . +|.- ..||..+++.+++.++ . .++.||.+|.-..-
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-~d~~-----kIga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~ 140 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV-CDVI-----QLPAFLARQTDLVVAM----A-KTGNVVNIKKPQFL 140 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEE-----EECGGGTTBHHHHHHH----H-HTCCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-CCEE-----EECcccccCHHHHHHH----H-cCCCcEEEECCCCC
Confidence 4556666666677776554311 1 4443 3688889999966654 2 36899999976532
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 192 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n 192 (311)
+. +++...+..+...|...+++.-|+..+ +|. ....|+..+..+++.++++||+..
T Consensus 141 t~----~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~------~~~~dl~~i~~lk~~~~~~pV~~D 196 (280)
T 2qkf_A 141 SP----SQMKNIVEKFHEAGNGKLILCERGSSF-GYD------NLVVDMLGFGVMKQTCGNLPVIFD 196 (280)
T ss_dssp CG----GGHHHHHHHHHHTTCCCEEEEECCEEC-STT------CEECCTTHHHHHHHHTTTCCEEEE
T ss_pred CH----HHHHHHHHHHHHcCCCeEEEEECCCCC-CCC------ccccCHHHHHHHHHhCCCCCEEEE
Confidence 22 245677888889998766665554322 221 112577888899988656899983
No 395
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=94.63 E-value=0.073 Score=48.72 Aligned_cols=60 Identities=15% Similarity=0.180 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcc---cCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAIL---MTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~L---l~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
+++...+-|+...+.|+|.||||.-.--| |+.. ....+.+..+|+++++..++|+||-..
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~ 93 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRP-------GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTW 93 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 45666666666777899999999533211 2222 245677888888898878999999753
No 396
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.61 E-value=2.3 Score=38.08 Aligned_cols=149 Identities=13% Similarity=0.076 Sum_probs=97.8
Q ss_pred CCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE-
Q psy2386 43 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH- 121 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi- 121 (311)
....|+++.+++++..+..+.++.+++.|+|+|=+. .|..+. -+.+-+.+-.++|.+++++||.+=-
T Consensus 67 ~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~~----------~s~~~l~~~f~~ia~a~~lPiilYn~ 134 (292)
T 2vc6_A 67 NGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIV--SPYYNK----------PTQEGIYQHFKAIDAASTIPIIVYNI 134 (292)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSSC----------CCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEc--CCCCCC----------CCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 446899999999999999999999999999999886 454321 1456677777788888899988743
Q ss_pred --eccCCCCCcHHHHHHHHHHHHH-c-CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCC
Q psy2386 122 --RIGIDDINSYDFVRDFVGTVSS-A-GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIK 196 (311)
Q Consensus 122 --R~g~~~~~~~~~~~e~~~~l~~-~-G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~ 196 (311)
|.|.+-. .+.+.+|.+ . .+.+|.-.. .|+..+.++.+..+ ++.| .+|+=
T Consensus 135 P~~tg~~l~------~~~~~~La~~~pnIvgiK~s~------------------gd~~~~~~~~~~~~~~f~v-~~G~d- 188 (292)
T 2vc6_A 135 PGRSAIEIH------VETLARIFEDCPNVKGVXDAT------------------GNLLRPSLERMACGEDFNL-LTGED- 188 (292)
T ss_dssp HHHHSCCCC------HHHHHHHHHHCTTEEEEEECS------------------CCTHHHHHHHHHSCTTSEE-EESCG-
T ss_pred ccccCcCCC------HHHHHHHHhhCCCEEEEecCC------------------CCHHHHHHHHHHcCCCEEE-EECch-
Confidence 3454332 244444444 3 233332211 25667777777654 4655 46641
Q ss_pred CHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 197 TKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 197 s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
+.+...+.. ++|++.+.+.+ -|..+.++.+.+.
T Consensus 189 --~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~a~~ 222 (292)
T 2vc6_A 189 --GTALGYMAHGGHGCISVTANV-APALCADFQQACL 222 (292)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCEEEecHHHh-CHHHHHHHHHHHH
Confidence 223344444 99999998876 4777777766544
No 397
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=94.60 E-value=0.13 Score=46.30 Aligned_cols=71 Identities=10% Similarity=0.088 Sum_probs=52.4
Q ss_pred HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcH-HHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 136 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY-NFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 136 e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~-~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
+-++.+.++|+|.|.+|.-+. .+. +.++.++...+++++.++||| +++.+.++.+. +|++.+
T Consensus 205 eea~eal~aGaD~I~LDn~~~---------------~~~~~~v~~l~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~isv 268 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNFAV---------------WQTQTAVQRRDSRAPTVMLESSGGL-SLQTAATYAETGVDYLAV 268 (284)
T ss_dssp HHHHHHGGGCCSEEEEETCCH---------------HHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHHTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCH---------------HHHHHHHHHhhccCCCeEEEEECCC-CHHHHHHHHhcCCCEEEE
Confidence 445666779999999986542 122 345556654457899999999 57889888877 999999
Q ss_pred ehhhhhCCc
Q psy2386 214 GREAYKNPF 222 (311)
Q Consensus 214 gRa~l~~P~ 222 (311)
|+....-|+
T Consensus 269 G~l~~~a~~ 277 (284)
T 1qpo_A 269 GALTHSVRV 277 (284)
T ss_dssp GGGTSSBCC
T ss_pred CHHHcCCCC
Confidence 987766665
No 398
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=94.59 E-value=0.77 Score=41.33 Aligned_cols=116 Identities=9% Similarity=0.141 Sum_probs=72.6
Q ss_pred cccCChHHHHHHHHHHhccccceeEEEEe-cc-CCCC-----CcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcC
Q psy2386 94 ILMTKPLLVSDCIKAMRDSVEIDITVKHR-IG-IDDI-----NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQN 166 (311)
Q Consensus 94 ~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR-~g-~~~~-----~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~ 166 (311)
.+..|-+...++++..++. ++.|-.-+- +| ..++ ..+-+..+..+.+++.|+|.|.+.=.|. -+-|.|
T Consensus 115 p~eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~-HG~Y~~--- 189 (288)
T 3q94_A 115 PFEENVETTKKVVEYAHAR-NVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSV-HGPYKG--- 189 (288)
T ss_dssp CHHHHHHHHHHHHHHHHTT-TCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCB-SSCCSS---
T ss_pred CHHHHHHHHHHHHHHHHHc-CCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcc-cCCcCC---
Confidence 3445667777888777653 555544432 22 1111 0111234555556789999998754442 111221
Q ss_pred CCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHH-HHHHHHhh-cCEEEEehhh
Q psy2386 167 RKIPILKYNFVYNLKKDFPELEIIINGGIKTKK-EIDLHLNY-IDGVMLGREA 217 (311)
Q Consensus 167 ~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~-da~~~l~~-adgVmigRa~ 217 (311)
.+..|++.+++|++.+ ++|++.-||=.+++ ++++++.. +.-|=|++.+
T Consensus 190 --~p~Ld~~~L~~I~~~v-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl 239 (288)
T 3q94_A 190 --EPNLGFAEMEQVRDFT-GVPLVLHGGTGIPTADIEKAISLGTSKINVNTEN 239 (288)
T ss_dssp --SCCCCHHHHHHHHHHH-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHH
T ss_pred --CCccCHHHHHHHHHhc-CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHH
Confidence 2458999999999998 69999998776654 46777765 7777777766
No 399
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=94.58 E-value=0.041 Score=49.90 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=37.3
Q ss_pred HHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHH-HHHHHHHh---CCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 139 GTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYN-FVYNLKKD---FPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 139 ~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~-~i~~i~~~---~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
+...++|+|+|-++.-+ +.+.. .++.+... +|++||.++||| +++.+.++.+. +|++.+
T Consensus 213 ~~A~~aGaD~I~ld~~~---------------~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~GvD~i~v 276 (294)
T 3c2e_A 213 TEAIEAGADVIMLDNFK---------------GDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDDIDIYST 276 (294)
T ss_dssp HHHHHHTCSEEECCC------------------------------------CCEEEEECCC-CC------CCCSCSEEEC
T ss_pred HHHHHcCCCEEEECCCC---------------HHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHHcCCCEEEE
Confidence 34446899999876422 11221 12223222 245999999999 99999999987 999999
Q ss_pred ehhhhhCCcc
Q psy2386 214 GREAYKNPFL 223 (311)
Q Consensus 214 gRa~l~~P~i 223 (311)
|+....-|++
T Consensus 277 Gs~i~~a~~~ 286 (294)
T 3c2e_A 277 SSIHQGTPVI 286 (294)
T ss_dssp GGGTSSCCCC
T ss_pred echhcCCCCC
Confidence 9987665653
No 400
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=94.57 E-value=0.21 Score=49.42 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHH
Q psy2386 57 PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRD 136 (311)
Q Consensus 57 ~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e 136 (311)
++...+-|+...+.|+|.||||.| +.....++.+.+++..+++.+++|++|-..- .+
T Consensus 339 ~~~a~~~A~~~v~~GAdiIDIgpg------------~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~-----------~~ 395 (566)
T 1q7z_A 339 EEIVIKEAKTQVEKGAEVLDVNFG------------IESQIDVRYVEKIVQTLPYVSNVPLSLDIQN-----------VD 395 (566)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECS------------SGGGSCHHHHHHHHHHHHHHTCSCEEEECCC-----------HH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCC------------CCCCCHHHHHHHHHHHHHhhCCceEEEeCCC-----------HH
Confidence 344445556666789999999933 3334667888999999988789999996431 24
Q ss_pred HHHHHHHc--CCCEE
Q psy2386 137 FVGTVSSA--GCRTF 149 (311)
Q Consensus 137 ~~~~l~~~--G~~~i 149 (311)
.++...++ |++.|
T Consensus 396 v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 396 LTERALRAYPGRSLF 410 (566)
T ss_dssp HHHHHHHHCSSCCEE
T ss_pred HHHHHHHhcCCCCEE
Confidence 55555565 77765
No 401
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=94.50 E-value=1.6 Score=41.40 Aligned_cols=155 Identities=9% Similarity=0.021 Sum_probs=94.8
Q ss_pred CCeEEEec---CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc---ccceeEE
Q psy2386 46 HPIAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS---VEIDITV 119 (311)
Q Consensus 46 ~p~~~Ql~---g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~---~~~pvsv 119 (311)
.|+++=+= |+ +....+.++.+.++|+.+|.|-=..+.+|.+..-.|-.| -..+...+=|++++.+ .+.|+.|
T Consensus 153 ~PviaD~dtGfG~-~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~l-v~~~e~v~rI~Aar~A~~~~g~d~~I 230 (439)
T 3i4e_A 153 APIVADAEAGFGG-VLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVL-VPTREAVAKLTAARLAADVMGTPTVL 230 (439)
T ss_dssp CCEEEECTTTTSS-HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCB-CCHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCeEEECCCCCCc-cHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCee-cCHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 89998884 44 446888889999999999999876655554443333344 4444444444455543 3677777
Q ss_pred EEeccCCC----------------------------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCc
Q psy2386 120 KHRIGIDD----------------------------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPI 171 (311)
Q Consensus 120 KiR~g~~~----------------------------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~ 171 (311)
=-|..-.. ....++.++-++.+.+ |+|.|-+++..
T Consensus 231 iARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~---------------- 293 (439)
T 3i4e_A 231 VARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGK---------------- 293 (439)
T ss_dssp EEEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSS----------------
T ss_pred EEEcCcccccccccccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCC----------------
Confidence 77764311 1235667788888888 99999998654
Q ss_pred CcHHHHHHHHHh----CCCCeEEEecC-CCC------HHHHHHHH----hh-cCEEEEehhhhh
Q psy2386 172 LKYNFVYNLKKD----FPELEIIINGG-IKT------KKEIDLHL----NY-IDGVMLGREAYK 219 (311)
Q Consensus 172 ~~~~~i~~i~~~----~~~ipvi~nGg-I~s------~~da~~~l----~~-adgVmigRa~l~ 219 (311)
.+.+.++++.+. +|.-++.+|.- ..+ .+++..+. +. ...|.++-+.+.
T Consensus 294 ~~~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~~r 357 (439)
T 3i4e_A 294 PDLEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFH 357 (439)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHHHH
T ss_pred CCHHHHHHHHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHHHH
Confidence 256666666654 44222334432 233 34443332 22 888888866543
No 402
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=94.48 E-value=0.38 Score=43.36 Aligned_cols=123 Identities=16% Similarity=0.065 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~ 134 (311)
=|.+.+.+-++.+.+.|+|+|=++ +.-|-+..-+.+.-.++++.+++.++- |.+ -+|-.. .++.
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~----------GttGE~~~Ls~eEr~~v~~~~~~~~~g-via--Gvg~~~---t~~a 80 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVN----------GTTGLGPSLSPEEKLENLKAVYDVTNK-IIF--QVGGLN---LDDA 80 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEES----------STTTTGGGSCHHHHHHHHHHHHTTCSC-EEE--ECCCSC---HHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC----------ccccChhhCCHHHHHHHHHHHHHHcCC-EEE--ecCCCC---HHHH
Confidence 478889999998889999999887 223444444556667888888887654 444 333222 3467
Q ss_pred HHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee----cCC-CCHHHHHH
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKKDFPELEII-IN----GGI-KTKKEIDL 203 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n----GgI-~s~~da~~ 203 (311)
+++++.+++.|+|++.+..-. |.. .+ ...-+++.+++++++ ++||+ +| -|+ -+++.+.+
T Consensus 81 i~la~~A~~~Gadavlv~~P~--y~~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 81 IRLAKLSKDFDIVGIASYAPY--YYPRMS-------EKHLVKYFKTLCEVS-PHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHHHHHGGGSCCSEEEEECCC--SCSSCC-------HHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCC--CCCCCC-------HHHHHHHHHHHHhhC-CCCEEEEECchhhCcCCCHHHHHh
Confidence 899999999999999876432 111 11 001246677888887 68875 45 243 46676665
No 403
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.46 E-value=0.25 Score=45.14 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~~ 133 (311)
|.+.+.+-++.+.+.|+|+|=++ +..|-+..-..+.-.++++.+++.+ .+||.+-+ |-. +..+
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~----------GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~~---~t~~ 94 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVIL----------GTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV--GAH---STRQ 94 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEES----------SGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC--CCS---SHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC----------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCC---CHHH
Confidence 77889999998989999999887 2233333334555566777776665 47888743 322 2346
Q ss_pred HHHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCC-CCHHHHHHHH
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGI-KTKKEIDLHL 205 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI-~s~~da~~~l 205 (311)
.+++++.+++.|+|++.+..-.. +.. .+ ...-+++.++|++++ ++||+ +| .|+ -+++.+.++.
T Consensus 95 ai~la~~a~~~Gadavlv~~P~y-~~kp~~-------~~~l~~~f~~ia~a~-~lPiilYn~P~~t~g~~l~~~~~~~La 165 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLPPAY-FGKATT-------PPVIKSFFDDVSCQS-PLPVVIYNFPGVCNGIDLDSDMITTIA 165 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCC----CCC-------HHHHHHHHHHHHHHC-SSCEEEEECCC----CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCcc-cCCCCC-------HHHHHHHHHHHHhhC-CCCEEEEeCCcccCCCCCCHHHHHHHH
Confidence 88999999999999998753321 100 00 001245566677766 57764 33 133 4566666655
Q ss_pred h
Q psy2386 206 N 206 (311)
Q Consensus 206 ~ 206 (311)
+
T Consensus 166 ~ 166 (318)
T 3qfe_A 166 R 166 (318)
T ss_dssp H
T ss_pred h
Confidence 4
No 404
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=94.45 E-value=1.2 Score=40.39 Aligned_cols=107 Identities=7% Similarity=0.065 Sum_probs=65.8
Q ss_pred ccCChHHHHHHHHHHhccccceeEEEEe-ccC-CCC------C-cHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCc
Q psy2386 95 LMTKPLLVSDCIKAMRDSVEIDITVKHR-IGI-DDI------N-SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ 165 (311)
Q Consensus 95 Ll~~~~~~~~iv~~v~~~~~~pvsvKiR-~g~-~~~------~-~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~ 165 (311)
+..|-+...++++...+. ++.|-.-+- +|- .++ + .+-+..+..+.+++.|+|.|.+.=.|. -+.|.++
T Consensus 108 ~eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~-HG~Yk~~- 184 (305)
T 1rvg_A 108 FETNVRETRRVVEAAHAV-GVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTS-HGAYKGK- 184 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCC-SSSBCSS-
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCcc-ccccCCC-
Confidence 445667777888777653 555544432 121 111 0 111234555556778999998754442 1112210
Q ss_pred CCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 166 NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 166 ~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
..+..|++.++++++.+ ++|++.-|+=.=|++..++++.
T Consensus 185 --g~p~L~~~~L~~I~~~~-~vpLVlHGgSsv~~~~~~~~~~ 223 (305)
T 1rvg_A 185 --GRPFIDHARLERIARLV-PAPLVLHGASAVPPELVERFRA 223 (305)
T ss_dssp --SSCCCCHHHHHHHHHHC-CSCEEECSCCCCCHHHHHHHHH
T ss_pred --CCCccCHHHHHHHHHhc-CCCEEEeCCCCCcHHHHHHHHh
Confidence 12458999999999999 5999999998777777777654
No 405
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=94.44 E-value=0.33 Score=43.64 Aligned_cols=108 Identities=12% Similarity=0.098 Sum_probs=69.8
Q ss_pred ccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCC
Q psy2386 91 FGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP 170 (311)
Q Consensus 91 ~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~ 170 (311)
.||..+++.+++.++- .+++||.+|.-...+. +++...++.+.+.|.+.|++.-|...+ +|. ..
T Consensus 116 IgA~~~~n~~LLr~va-----~~gkPVilK~G~~~t~----~ei~~ave~i~~~Gn~~i~L~erg~~y-~~~------~~ 179 (285)
T 3sz8_A 116 VPAFLARQTDLVVAIA-----KAGKPVNVKKPQFMSP----TQLKHVVSKCGEVGNDRVMLCERGSSF-GYD------NL 179 (285)
T ss_dssp ECGGGTTCHHHHHHHH-----HTSSCEEEECCTTSCG----GGTHHHHHHHHHTTCCCEEEEECCEEC-SSS------CE
T ss_pred ECccccCCHHHHHHHH-----ccCCcEEEeCCCCCCH----HHHHHHHHHHHHcCCCcEEEEeCCCCC-CCC------cC
Confidence 6888899999766543 2689999996653222 134677888899998877765444323 221 11
Q ss_pred cCcHHHHHHHHHhCCCCeEEEecCCC---------------C--HHHHHHHHhh-cCEEEEe
Q psy2386 171 ILKYNFVYNLKKDFPELEIIINGGIK---------------T--KKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 171 ~~~~~~i~~i~~~~~~ipvi~nGgI~---------------s--~~da~~~l~~-adgVmig 214 (311)
.+|+..+..+++.++++||+...+=. . +.-+...... |||++|=
T Consensus 180 ~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE 241 (285)
T 3sz8_A 180 VVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLE 241 (285)
T ss_dssp ECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEE
T ss_pred ccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEE
Confidence 26888899999987459999843322 1 2233444444 9999986
No 406
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=94.38 E-value=0.65 Score=41.81 Aligned_cols=167 Identities=11% Similarity=0.020 Sum_probs=96.8
Q ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCc
Q psy2386 51 QVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINS 130 (311)
Q Consensus 51 Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~ 130 (311)
=+...|+- .|++++++|||.|=+--+ ....+. -|+-....-..+.+...+++|.+.++.||.+-+-.|+- +
T Consensus 25 ~~~a~D~~----sA~i~e~aGf~ai~vs~s-~~a~~~-lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg---~ 95 (287)
T 3b8i_A 25 TASVFDPM----SARIAADLGFECGILGGS-VASLQV-LAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG---N 95 (287)
T ss_dssp CEECCSHH----HHHHHHHTTCSCEEECHH-HHHHHH-HSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS---S
T ss_pred EecCCCHH----HHHHHHHcCCCEEEeCcH-HHHHHh-cCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC---C
Confidence 35555654 467888899999877511 111111 12223344566778888889999899999999999864 2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCcc-ccccCCCCcCCCCCcCc--HHHHHHHHHhC--CCCeEEEecCC--CCHHHH--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNA-FLKKLNPKQNRKIPILK--YNFVYNLKKDF--PELEIIINGGI--KTKKEI-- 201 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~-~~~G~~g~~~~~~~~~~--~~~i~~i~~~~--~~ipvi~nGgI--~s~~da-- 201 (311)
.++..+.++.+.++|+++|.+-+... ..-|..+. ..-+.+ .+.|+.++++. +++-|++--|- ...+++
T Consensus 96 ~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~g---kl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~ 172 (287)
T 3b8i_A 96 ALNVMRTVVELERAGIAALTIEDTLLPAQFGRKST---DLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQ 172 (287)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTT---CBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCC---CccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHH
Confidence 34577889999999999999986642 01122111 111111 23444444442 23555555444 112333
Q ss_pred --HHHHhh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 202 --DLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 202 --~~~l~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+.+.+. ||+|++= + +.++..++++.+.+
T Consensus 173 Ra~ay~eAGAd~i~~e-~-~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 173 RTLAYQEAGADGICLV-G-VRDFAHLEAIAEHL 203 (287)
T ss_dssp HHHHHHHTTCSEEEEE-C-CCSHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEec-C-CCCHHHHHHHHHhC
Confidence 333333 9999984 2 34445666665543
No 407
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.35 E-value=0.29 Score=44.73 Aligned_cols=168 Identities=11% Similarity=0.089 Sum_probs=96.2
Q ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEecc-CCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCC
Q psy2386 50 FQVGDNEPKKLAKSAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDD 127 (311)
Q Consensus 50 ~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~-gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~ 127 (311)
+=+...|+- .|++++++|||.|=+-- +.- .+. -|+-...+-..+.+...+++|.+.+ +.||.+-+-.|+-
T Consensus 42 ~~~~ayD~~----sA~i~e~aGfdai~vs~~~~a--~~~-lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg- 113 (318)
T 1zlp_A 42 LMPGVQDAL----SAAVVEKTGFHAAFVSGYSVS--AAM-LGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG- 113 (318)
T ss_dssp EEEEECSHH----HHHHHHHTTCSEEEECHHHHH--HHH-HCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-
T ss_pred EEecCCCHH----HHHHHHHcCCCEEEECcHHHh--hHh-cCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-
Confidence 335556654 46788889999997752 111 111 1233334456677778888888888 9999999999964
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCcc-ccccCCC-CcCCCCCc-CcHHHHHHHHHhC--CCCeEEEecCCCCH----
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNA-FLKKLNP-KQNRKIPI-LKYNFVYNLKKDF--PELEIIINGGIKTK---- 198 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~-~~~G~~g-~~~~~~~~-~~~~~i~~i~~~~--~~ipvi~nGgI~s~---- 198 (311)
+ .+...+.++.+.++|+++|.+-+... .--|..| ++ -.+. ...+.|+.++++. +++-|++=.|-...
T Consensus 114 -~-~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~--L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~ 189 (318)
T 1zlp_A 114 -G-PLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKA--VVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLE 189 (318)
T ss_dssp -S-HHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCC--BCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHH
T ss_pred -C-HHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCc--cCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHH
Confidence 2 33678889999999999999986642 0112111 11 0110 0122344444432 23455555554422
Q ss_pred ---HHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 199 ---KEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 199 ---~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
++++.+.+. ||+|++= + +.++..++++.+.+
T Consensus 190 ~ai~Ra~Ay~eAGAd~i~~e-~-~~~~e~~~~i~~~l 224 (318)
T 1zlp_A 190 EGIRRANLYKEAGADATFVE-A-PANVDELKEVSAKT 224 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEEC-C-CCSHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCEEEEc-C-CCCHHHHHHHHHhc
Confidence 122223333 9999983 1 24445566665543
No 408
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=94.35 E-value=0.09 Score=49.64 Aligned_cols=67 Identities=18% Similarity=0.296 Sum_probs=52.7
Q ss_pred HHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
.+.++.+.++|++.|.++.-. |. +..-|+.++++++.+|++||++ |++.++++++.+.+. +|+|.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~----g~--------~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAH----GH--------STRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSC----CS--------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCC----CC--------hHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEE
Confidence 567788889999999985321 11 1235788999999886799987 788999999998876 999999
Q ss_pred e
Q psy2386 214 G 214 (311)
Q Consensus 214 g 214 (311)
|
T Consensus 222 g 222 (404)
T 1eep_A 222 G 222 (404)
T ss_dssp C
T ss_pred C
Confidence 4
No 409
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=94.31 E-value=0.11 Score=46.42 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCC--C---cHHHH
Q psy2386 60 LAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDI--N---SYDFV 134 (311)
Q Consensus 60 ~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~--~---~~~~~ 134 (311)
+.+-.+.|.+.||+.|||+-|+= =+. .+.-.++|+.+ .+. +.|+.-.|..+. + +.+..
T Consensus 112 ~~~yl~~~k~lGF~~IEISdGti------------~l~-~~~~~~lI~~a---~~~-f~Vl~EvG~K~~~~~~~~~~~~~ 174 (276)
T 1u83_A 112 VNEFHRYCTYFGCEYIEISNGTL------------PMT-NKEKAAYIADF---SDE-FLVLSEVGSKDAELASRQSSEEW 174 (276)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSS------------CCC-HHHHHHHHHHH---TTT-SEEEEECSCCC------CCSTHH
T ss_pred HHHHHHHHHHcCCCEEEECCCcc------------cCC-HHHHHHHHHHH---Hhh-cEEeeeccccCccccCCCCHHHH
Confidence 44445677899999999995542 222 33334444443 334 788888887654 1 23467
Q ss_pred HHHHHHHHHcCCCEEEEecCcc
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNA 156 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~ 156 (311)
++.++...++||+.|++-+|..
T Consensus 175 I~~~~~dLeAGA~~ViiEaRES 196 (276)
T 1u83_A 175 LEYIVEDMEAGAEKVITEARES 196 (276)
T ss_dssp HHHHHHHHHHTEEEEEEC----
T ss_pred HHHHHHHHHCCCcEEEEeeecc
Confidence 8899999999999999999963
No 410
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=94.29 E-value=1.5 Score=38.54 Aligned_cols=137 Identities=14% Similarity=0.178 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec---cCCCCCc
Q psy2386 54 DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI---GIDDINS 130 (311)
Q Consensus 54 g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~---g~~~~~~ 130 (311)
|-.+..+...-+.+-++ .|++-+ ++|++.+-..+.+.+.++-.+++ +++|+--=.. -+.. .
T Consensus 22 glg~~~~~d~Le~~g~y-ID~lKf------------g~Gt~~l~~~~~l~eki~l~~~~-gV~v~~GGTl~E~~~~q-g- 85 (251)
T 1qwg_A 22 GLPPKFVEDYLKVCGDY-IDFVKF------------GWGTSAVIDRDVVKEKINYYKDW-GIKVYPGGTLFEYAYSK-G- 85 (251)
T ss_dssp SCCHHHHHHHHHHHGGG-CSEEEE------------CTTGGGGSCHHHHHHHHHHHHTT-TCEEEECHHHHHHHHHT-T-
T ss_pred CCCHHHHHHHHHHhhhh-cceEEe------------cCceeeecCHHHHHHHHHHHHHc-CCeEECCcHHHHHHHHc-C-
Confidence 44566665555555455 677776 58888888999999999998886 7776542100 0001 1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcH-HHHHHHHHhCCCCeEEEec--------CCCCHHHH
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKY-NFVYNLKKDFPELEIIING--------GIKTKKEI 201 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~-~~i~~i~~~~~~ipvi~nG--------gI~s~~da 201 (311)
.+.++.+.+.+.|.+.|-|...+-. .+..+| ++|+++++. .+.|+..= +..++++.
T Consensus 86 --~~~~yl~~~k~lGf~~iEiS~G~i~-----------l~~~~~~~~I~~~~~~--G~~v~~EvG~k~~~~~~~~~~~~~ 150 (251)
T 1qwg_A 86 --KFDEFLNECEKLGFEAVEISDGSSD-----------ISLEERNNAIKRAKDN--GFMVLTEVGKKMPDKDKQLTIDDR 150 (251)
T ss_dssp --CHHHHHHHHHHHTCCEEEECCSSSC-----------CCHHHHHHHHHHHHHT--TCEEEEEECCSSHHHHTTCCHHHH
T ss_pred --cHHHHHHHHHHcCCCEEEECCCccc-----------CCHHHHHHHHHHHHHC--CCEEeeeccccCCcccCCCCHHHH
Confidence 2467888999999999999876531 122344 477777775 35555543 34455665
Q ss_pred HHHH----hh-cCEEEE-eh------hhhhCC
Q psy2386 202 DLHL----NY-IDGVML-GR------EAYKNP 221 (311)
Q Consensus 202 ~~~l----~~-adgVmi-gR------a~l~~P 221 (311)
.+.. +. |+.||+ || |++.+-
T Consensus 151 I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~ 182 (251)
T 1qwg_A 151 IKLINFDLDAGADYVIIEGRESGKGKGLFDKE 182 (251)
T ss_dssp HHHHHHHHHHTCSEEEECCTTTCCSSTTBCTT
T ss_pred HHHHHHHHHCCCcEEEEeeecccCCcccCCCC
Confidence 5544 33 999999 78 887766
No 411
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.18 E-value=0.12 Score=43.63 Aligned_cols=145 Identities=14% Similarity=0.079 Sum_probs=80.9
Q ss_pred ccccCCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccccee
Q psy2386 38 CLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDI 117 (311)
Q Consensus 38 ~l~~~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pv 117 (311)
...+-..+..+++=++|+ ...+.+..+.+.+.| .-+=+|.+--.. |-+|.+-+.=+ +..+- +--+
T Consensus 24 ~~~~~~s~~~~ifll~g~-I~~L~~iv~~ik~~g-K~vivh~DlI~G----------Ls~d~~ai~fL-~~~~p--dGII 88 (188)
T 1vkf_A 24 MDSIGEIEPDVVFLLKSD-ILNLKFHLKILKDRG-KTVFVDMDFVNG----------LGEGEEAILFV-KKAGA--DGII 88 (188)
T ss_dssp SSSCCCCCSSEEEECCEE-TTTHHHHHHHHHHTT-CEEEEEGGGEET----------CCSSHHHHHHH-HHHTC--SEEE
T ss_pred hcccccCCCCEEEEEeCc-HHHHHHHHHHHHHCC-CeEEEecCcccc----------cCCCHHHHHHH-HhcCC--CEEE
Confidence 334444455666666665 355888888888876 666666443221 22333332222 22111 1111
Q ss_pred EEE---------------EeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHH
Q psy2386 118 TVK---------------HRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK 182 (311)
Q Consensus 118 svK---------------iR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~ 182 (311)
|-| -|.-.-+.. .+..-++.+.....|++-+-+.. +--+.++++
T Consensus 89 sTk~~~i~~Akk~GL~tIqR~FliDs~---al~~~~~~I~~~kPD~iEiLPg~----------------v~p~~I~~v-- 147 (188)
T 1vkf_A 89 TIKPKNYVVAKKNGIPAVLRFFALDSK---AVERGIEQIETLGVDVVEVLPGA----------------VAPKVARKI-- 147 (188)
T ss_dssp ESCHHHHHHHHHTTCCEEEEEECCSHH---HHHHHHHHHHHHTCSEEEEESGG----------------GHHHHHTTS--
T ss_pred cCcHHHHHHHHHcCCEEeeEEEEEEeH---HHhhhhhhccccCCCeEeecCCC----------------chHHHHHHh--
Confidence 111 122111111 23344555556666665543221 123566666
Q ss_pred hCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCC
Q psy2386 183 DFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNP 221 (311)
Q Consensus 183 ~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P 221 (311)
. ++|||+.|+|+|.||+.+ ++. ||+|..+.--+++.
T Consensus 148 -~-~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 148 -P-GRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp -T-TSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred -c-CCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 4 799999999999999999 876 99999998776653
No 412
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.18 E-value=0.74 Score=39.24 Aligned_cols=171 Identities=9% Similarity=0.104 Sum_probs=95.9
Q ss_pred CCCCHHHHHHHHHhCCCcEEEecce--eccccc-CCchhccccCCCCCCeEEEecC-CCHHHHHHHHHHHHHcCCCEEEe
Q psy2386 2 NLTDRHCRMFHRQITRYSWLYTEMF--TTQAIL-GNKKHCLDFNAEEHPIAFQVGD-NEPKKLAKSAKIIQKWGYDEINL 77 (311)
Q Consensus 2 ~~td~~fR~l~~~~g~~~l~~temv--~a~~l~-~~~~~~l~~~~~~~p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~Idi 77 (311)
|+|+..==..+.+.|+..+-|- +. |.+.+- .....+...-+ ..+..|-+|- .+++.+. +++...+.|.|.|
T Consensus 7 Git~~eda~~a~~~GaD~iGfi-f~~~SpR~V~~~~a~~i~~~~~-~~~~~VgVfvn~~~~~i~---~~~~~~~ld~vQL 81 (203)
T 1v5x_A 7 GITRLEDALLAEALGAFALGFV-LAPGSRRRIAPEAARAIGEALG-PFVVRVGVFRDQPPEEVL---RLMEEARLQVAQL 81 (203)
T ss_dssp CCCCHHHHHHHHHHTCSEEEEE-CCTTCTTBCCHHHHHHHHHHSC-SSSEEEEEESSCCHHHHH---HHHHHTTCSEEEE
T ss_pred CCCcHHHHHHHHHcCCCEEEEE-ecCCCCCcCCHHHHHHHHHhCC-CCCCEEEEEeCCCHHHHH---HHHHhhCCCEEEE
Confidence 5666666677778885322222 21 222221 11111222112 2233344454 4555554 4556788999999
Q ss_pred ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy2386 78 NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF 157 (311)
Q Consensus 78 N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~ 157 (311)
| |. .+|+.+.++ +. ++|+.--+++.... ++ .+.+..+|++.+.+..
T Consensus 82 H-------------G~---e~~~~~~~l----~~--~~~vika~~v~~~~--------~l--~~~~~~~d~~LlD~~~-- 127 (203)
T 1v5x_A 82 H-------------GE---EPPEWAEAV----GR--FYPVIKAFPLEGPA--------RP--EWADYPAQALLLDGKR-- 127 (203)
T ss_dssp C-------------SC---CCHHHHHHH----TT--TSCEEEEEECSSSC--------CG--GGGGSSCSEEEEECSS--
T ss_pred C-------------CC---CCHHHHHHh----cc--CCCEEEEEEcCChH--------hh--hhhhcCCCEEEEcCCC--
Confidence 9 11 356655543 22 57877666764221 11 1233348999887532
Q ss_pred cccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCc
Q psy2386 158 LKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPF 222 (311)
Q Consensus 158 ~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~ 222 (311)
|-+|+ ..||+.+..+.. . +.|++..||+ +++.+.+.+.. ++||=+.+|.-..|-
T Consensus 128 --gGtG~------~fdW~~l~~~~~-~-~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG 182 (203)
T 1v5x_A 128 --PGSGE------AYPRAWAKPLLA-T-GRRVILAGGI-APENLEEVLALRPYALDLASGVEEAPG 182 (203)
T ss_dssp --TTSCC------CCCGGGGHHHHH-T-TSCEEECSSC-CSTTHHHHHHHCCSEEEESGGGEEETT
T ss_pred --CCCCC------ccCHHHHHhhhc-c-CCcEEEECCC-CHHHHHHHHhcCCCEEEeCCceecCCC
Confidence 22332 379998877322 3 5799999999 46777666642 999999999864443
No 413
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.17 E-value=0.28 Score=44.69 Aligned_cols=126 Identities=13% Similarity=0.002 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc--cceeEEEEeccCCCCCcHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV--EIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~--~~pvsvKiR~g~~~~~~~~ 132 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |.. +..
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv--g~~---~t~ 89 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAG----------TTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV--GTN---DTR 89 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESS----------TTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC--CCS---SHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CCc---CHH
Confidence 3667888888988899999999872 233333345555567777777765 47888743 322 234
Q ss_pred HHHHHHHHHHHcCC-CEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE-Ee-----cCCCCHHHHHHHH
Q psy2386 133 FVRDFVGTVSSAGC-RTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII-IN-----GGIKTKKEIDLHL 205 (311)
Q Consensus 133 ~~~e~~~~l~~~G~-~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi-~n-----GgI~s~~da~~~l 205 (311)
+.+++++.+++.|+ |++.+..-. +...+ ...-+++.+++.++. ++||+ .| |--.+++.+.++.
T Consensus 90 ~ai~la~~A~~~Ga~davlv~~P~--y~~~s-------~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La 159 (311)
T 3h5d_A 90 DSIEFVKEVAEFGGFAAGLAIVPY--YNKPS-------QEGMYQHFKAIADAS-DLPIIIYNIPGRVVVELTPETMLRLA 159 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEECCC--SSCCC-------HHHHHHHHHHHHHSC-SSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEcCCC--CCCCC-------HHHHHHHHHHHHHhC-CCCEEEEecccccCCCCCHHHHHHHh
Confidence 67899999999997 999876432 11100 001234566666665 57754 44 3334555555443
No 414
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.16 E-value=1.4 Score=41.75 Aligned_cols=154 Identities=9% Similarity=0.008 Sum_probs=93.2
Q ss_pred CCeEEEec---CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcc---ccceeEE
Q psy2386 46 HPIAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDS---VEIDITV 119 (311)
Q Consensus 46 ~p~~~Ql~---g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~---~~~pvsv 119 (311)
.|+++=+= |+ +....+.++.+.++|+.+|.|-=....+|.+....|..| -..+...+=|++++.+ .+.++.|
T Consensus 153 lPviaD~DtGyG~-~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~l-v~~~e~~~rI~Aa~~A~~~~~~d~~I 230 (435)
T 3lg3_A 153 LPIVADAEAGFGG-VLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVL-VPTQEAIQKLVAARLAADVLGVPTLL 230 (435)
T ss_dssp CCEEEECTTCSSS-HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEE-CCHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCeEEECCCCCCC-cHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCee-cCHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 88998883 54 446788889999999999999866644444433233344 4444444444444443 3667777
Q ss_pred EEeccCCC----------------------------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCc
Q psy2386 120 KHRIGIDD----------------------------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPI 171 (311)
Q Consensus 120 KiR~g~~~----------------------------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~ 171 (311)
=-|..-.. ....++.++-++.+.+ |+|.|-+|+..
T Consensus 231 iARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~---------------- 293 (435)
T 3lg3_A 231 IARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETST---------------- 293 (435)
T ss_dssp EEEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSS----------------
T ss_pred EEEcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCC----------------
Confidence 67764210 0335667788888888 99999998664
Q ss_pred CcHHHHHHHHHh----CCCCeEEEecC-CCC------HHHHHHHHh---h--cCEEEEehhhh
Q psy2386 172 LKYNFVYNLKKD----FPELEIIINGG-IKT------KKEIDLHLN---Y--IDGVMLGREAY 218 (311)
Q Consensus 172 ~~~~~i~~i~~~----~~~ipvi~nGg-I~s------~~da~~~l~---~--adgVmigRa~l 218 (311)
.+.+.++++++. +|.-++.+|.- .++ .+++..+.+ . ...|.++-+.+
T Consensus 294 ~~~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~ 356 (435)
T 3lg3_A 294 PDLALAKRFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGI 356 (435)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHH
T ss_pred CCHHHHHHHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHH
Confidence 256666666554 44333444442 233 445544432 2 66777775553
No 415
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.10 E-value=0.42 Score=44.54 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=65.1
Q ss_pred HhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcccc--------ccCC------------------
Q psy2386 109 MRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFL--------KKLN------------------ 162 (311)
Q Consensus 109 v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~--------~G~~------------------ 162 (311)
+.+....|..+.+-.+.+. +...++++++++.|++.|.|+--+... +++.
T Consensus 117 v~~~~~~~~~~QLy~~~d~----~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~ 192 (370)
T 1gox_A 117 VASTGPGIRFFQLYVYKDR----NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKM 192 (370)
T ss_dssp HHTTCCCCEEEEECCBSSH----HHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC--
T ss_pred HHhhcCCCceEEEecCCCc----hHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhcc
Confidence 3333335666655443332 245788999999999998876332100 1110
Q ss_pred ----CCcC------CCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 163 ----PKQN------RKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 163 ----g~~~------~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmig 214 (311)
|..- ...+..+|+.++++++.. ++||+. +++.+++++..+.+. +|+|.++
T Consensus 193 ~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~-~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs 253 (370)
T 1gox_A 193 DKANDSGLSSYVAGQIDRSLSWKDVAWLQTIT-SLPILV-KGVITAEDARLAVQHGAAGIIVS 253 (370)
T ss_dssp -------HHHHHHHTBCTTCCHHHHHHHHHHC-CSCEEE-ECCCSHHHHHHHHHTTCSEEEEC
T ss_pred ccccCccHHHHHHhhcCccchHHHHHHHHHHh-CCCEEE-EecCCHHHHHHHHHcCCCEEEEC
Confidence 0000 012345789999999998 799985 778999999999887 9999994
No 416
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.06 E-value=0.65 Score=38.99 Aligned_cols=84 Identities=13% Similarity=0.031 Sum_probs=54.8
Q ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCC
Q psy2386 48 IAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGID 126 (311)
Q Consensus 48 ~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~ 126 (311)
+++-+-..+.++..+.++.+.+ |+|.|+++++. . .. .| + ++++++++.. +.|+.+-+-.. +
T Consensus 3 li~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~--~--~~--~g------~----~~i~~l~~~~~~~~i~~~l~~~-d 64 (207)
T 3ajx_A 3 LQVAIDLLSTEAALELAGKVAE-YVDIIELGTPL--I--KA--EG------L----SVITAVKKAHPDKIVFADMKTM-D 64 (207)
T ss_dssp EEEEECCSCHHHHHHHHHHHGG-GCSEEEECHHH--H--HH--HC------T----HHHHHHHHHSTTSEEEEEEEEC-S
T ss_pred EEEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHH--H--Hh--hC------H----HHHHHHHHhCCCCeEEEEEEec-C
Confidence 4555556678887777777766 78999996532 1 11 12 2 3566777766 77887633332 2
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEecCc
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVHARN 155 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh~Rt 155 (311)
- ...+++.+.++|+|.+++|+-.
T Consensus 65 i------~~~~~~~a~~~Gad~v~vh~~~ 87 (207)
T 3ajx_A 65 A------GELEADIAFKAGADLVTVLGSA 87 (207)
T ss_dssp C------HHHHHHHHHHTTCSEEEEETTS
T ss_pred c------cHHHHHHHHhCCCCEEEEeccC
Confidence 1 1245788899999999999753
No 417
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=94.05 E-value=0.16 Score=46.11 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=43.5
Q ss_pred CCCeEEEecCCCH------------HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccC---ChHHHHHHHHHH
Q psy2386 45 EHPIAFQVGDNEP------------KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMT---KPLLVSDCIKAM 109 (311)
Q Consensus 45 ~~p~~~Ql~g~~~------------~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~---~~~~~~~iv~~v 109 (311)
.+|.|+=+.--+| +...+.|+...+.|+|.||||.-.-- -|+.... ..+.+..+++++
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStr-------Pga~~v~~~eE~~RvvpvI~~l 110 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTR-------PGFAKVSVEEEIKRVVPMIQAV 110 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC-----------CCCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCC-------CCCCCCCHHHHHHHHHHHHHHH
Confidence 4566666554433 55555666667789999999964421 1222222 334455566888
Q ss_pred hccccceeEEEEe
Q psy2386 110 RDSVEIDITVKHR 122 (311)
Q Consensus 110 ~~~~~~pvsvKiR 122 (311)
++.+++|++|-..
T Consensus 111 ~~~~~vpiSIDT~ 123 (297)
T 1tx2_A 111 SKEVKLPISIDTY 123 (297)
T ss_dssp HHHSCSCEEEECS
T ss_pred HhcCCceEEEeCC
Confidence 8877999999643
No 418
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.96 E-value=0.91 Score=41.21 Aligned_cols=127 Identities=7% Similarity=0.082 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~ 133 (311)
=|.+.+.+-++.+.+.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |-. +..+
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv--g~~---~t~~ 90 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLG----------ILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV--SAP---GFAA 90 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEEST----------GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC--CCS---SHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCc----------cCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec--CCC---CHHH
Confidence 4788899999999899999998871 223333334454466667666655 57877743 322 2346
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEE-Ee-----cCCCCHHHHHHHHh
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEII-IN-----GGIKTKKEIDLHLN 206 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi-~n-----GgI~s~~da~~~l~ 206 (311)
.+++++.+++.|+|++.+.+-.. .+. ...-+++.++|+++++ ++||+ +| |---+++.+.++.+
T Consensus 91 ai~la~~A~~~Gadavlv~~P~~-----~~s-----~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 91 MRRLARLSMDAGAAGVMIAPPPS-----LRT-----DEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHHHHHTCSEEEECCCTT-----CCS-----HHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCC-----CCC-----HHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 78999999999999998753210 000 0012456677777762 28875 33 44456777766654
No 419
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=93.95 E-value=0.19 Score=46.94 Aligned_cols=108 Identities=11% Similarity=0.141 Sum_probs=57.6
Q ss_pred ccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCC
Q psy2386 91 FGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIP 170 (311)
Q Consensus 91 ~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~ 170 (311)
.++..+++|+. . -..-++..-+.|+..-+... . . ..+..+.++..|+|++.+|-.... .-..+... +
T Consensus 123 s~~~~le~~~~-~-~~~v~r~~P~~~~ianig~~--~--~---~e~~~~~ve~~~adal~ihln~~q-e~~~p~Gd---~ 189 (365)
T 3sr7_A 123 SYSTALKNPDD-T-SYQVKKSRPHLLLATNIGLD--K--P---YQAGLQAVRDLQPLFLQVHINLMQ-ELLMPEGE---R 189 (365)
T ss_dssp ------------------------CCEEEEEETT--S--C---HHHHHHHHHHHCCSCEEEEECHHH-HHTSSSSC---C
T ss_pred cccccccCccc-c-ceEehhhCCCCcEEEEeCCC--C--C---HHHHHHHHHhcCCCEEEEeccccc-cccCCCCC---C
Confidence 34455677774 1 11112222356665544432 1 1 235677788999999999966421 11111100 0
Q ss_pred cC-cH-HHHHHHHHhCCCCeEEEecCC---CCHHHHHHHHhh-cCEEEE
Q psy2386 171 IL-KY-NFVYNLKKDFPELEIIINGGI---KTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 171 ~~-~~-~~i~~i~~~~~~ipvi~nGgI---~s~~da~~~l~~-adgVmi 213 (311)
.. +| +.|+++++.+ ++||+.=| | .++++++.+.+. +|+|.+
T Consensus 190 ~~~~~~~~I~~l~~~~-~~PVivK~-vg~g~s~e~A~~l~~aGad~I~V 236 (365)
T 3sr7_A 190 EFRSWKKHLSDYAKKL-QLPFILKE-VGFGMDVKTIQTAIDLGVKTVDI 236 (365)
T ss_dssp CCHHHHHHHHHHHHHC-CSCEEEEE-CSSCCCHHHHHHHHHHTCCEEEC
T ss_pred cHHHHHHHHHHHHHhh-CCCEEEEE-CCCCCCHHHHHHHHHcCCCEEEE
Confidence 11 34 7899999998 79998875 6 799999999876 999988
No 420
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.94 E-value=0.42 Score=43.74 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=68.0
Q ss_pred ChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHH
Q psy2386 98 KPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFV 177 (311)
Q Consensus 98 ~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i 177 (311)
+++.+.+.++.+++.++.|+.|.+-.. +. .+.+.++.+.++|++.|.+|+... .+++
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~-----~~~~~~~~a~~~g~d~V~~~~g~p-----------------~~~i 103 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-SP-----FVEDIVDLVIEEGVKVVTTGAGNP-----------------SKYM 103 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-ST-----THHHHHHHHHHTTCSEEEECSSCG-----------------GGTH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-CC-----CHHHHHHHHHHCCCCEEEECCCCh-----------------HHHH
Confidence 678888889999887788988776542 21 135778888999999999997531 2346
Q ss_pred HHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE-eh
Q psy2386 178 YNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML-GR 215 (311)
Q Consensus 178 ~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi-gR 215 (311)
+++++. ++||+. .|.+.+++..+.+. +|+|.+ |+
T Consensus 104 ~~l~~~--g~~v~~--~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 104 ERFHEA--GIIVIP--VVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp HHHHHT--TCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHc--CCeEEE--EeCCHHHHHHHHHcCCCEEEEECC
Confidence 677663 688885 47899999888776 999999 54
No 421
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.86 E-value=0.43 Score=41.06 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=62.1
Q ss_pred HHHHHHhccccceeEEEEeccCCCCCc-HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHH
Q psy2386 104 DCIKAMRDSVEIDITVKHRIGIDDINS-YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK 182 (311)
Q Consensus 104 ~iv~~v~~~~~~pvsvKiR~g~~~~~~-~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~ 182 (311)
+.++.+++.+++|+..-++.++++... .....+.++.+.++|++.|++|..... . ..+....+.++++++
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~--~-------~~~~~~~~~i~~i~~ 129 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRD--R-------HDGLDIASFIRQVKE 129 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSC--C-------TTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccC--C-------CCCccHHHHHHHHHH
Confidence 346777777889983223333321110 001246678889999999999975420 0 000023578999998
Q ss_pred hCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 183 DFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 183 ~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
.+++++|+. ++.+++++..+.+. +|.|
T Consensus 130 ~~~~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 130 KYPNQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp HCTTCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred hCCCCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 876677665 78899999888876 9988
No 422
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=93.85 E-value=1.9 Score=40.89 Aligned_cols=154 Identities=10% Similarity=0.064 Sum_probs=90.2
Q ss_pred CCCeEEEec---CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc---cceeE
Q psy2386 45 EHPIAFQVG---DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV---EIDIT 118 (311)
Q Consensus 45 ~~p~~~Ql~---g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~---~~pvs 118 (311)
..|+++=+= |+ +....+.++.+.++|+.+|.|-=..+.+|.+....|-.|..-.+.+.+|. +++.+. +.++.
T Consensus 145 ~lPIiaD~DtGfG~-~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~-AAr~A~~~~g~d~v 222 (433)
T 3eol_A 145 FAPIVADAEAGFGD-PLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLN-AARLAADVMGTPTL 222 (433)
T ss_dssp CCCEEEECC---CC-HHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHH-HHHHHHHHHTCCCE
T ss_pred CCCeEEECCCCCCC-cHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHH-HHHHHHHhcCCCEE
Confidence 589998774 44 45688888999999999999976665555444333444444445555544 444332 56777
Q ss_pred EEEeccCCC------------------------------CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCC
Q psy2386 119 VKHRIGIDD------------------------------INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRK 168 (311)
Q Consensus 119 vKiR~g~~~------------------------------~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~ 168 (311)
|=-|..-.. ....++.++-++.+.+ |+|.|-+|+..
T Consensus 223 IiARTDA~~a~l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~------------- 288 (433)
T 3eol_A 223 IVARTDAEAAKLLTSDIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSK------------- 288 (433)
T ss_dssp EEEEECTTTCCEESCCCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSS-------------
T ss_pred EEEEcCCccccccccCcccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCC-------------
Confidence 766764210 0335677788888888 99999998764
Q ss_pred CCcCcHHHHHHHHHh----CCCCeEEEecCC--C------CHHHHHHH---Hhh--cCEEEEehhhh
Q psy2386 169 IPILKYNFVYNLKKD----FPELEIIINGGI--K------TKKEIDLH---LNY--IDGVMLGREAY 218 (311)
Q Consensus 169 ~~~~~~~~i~~i~~~----~~~ipvi~nGgI--~------s~~da~~~---l~~--adgVmigRa~l 218 (311)
.+.+.++++.+. +| .++++.|.- . +.+++..+ |.. +..|.++-+++
T Consensus 289 ---~~~eei~~f~~~v~~~~P-~~~L~~~~sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~~ 351 (433)
T 3eol_A 289 ---PDLAQARRFAEAVHKAHP-GKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGF 351 (433)
T ss_dssp ---CCHHHHHHHHHHHHHHST-TCCEEEECCSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHHH
T ss_pred ---CCHHHHHHHHHHhcccCC-CcccccCCCCCCcccccCChhHHhHHHHHHHHcCCeEEEeCcHHH
Confidence 256666666655 34 333433332 2 33344333 222 77888876554
No 423
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=93.79 E-value=0.52 Score=43.53 Aligned_cols=111 Identities=18% Similarity=0.176 Sum_probs=69.9
Q ss_pred CCCCCeEEEec-------CCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccc
Q psy2386 43 AEEHPIAFQVG-------DNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEI 115 (311)
Q Consensus 43 ~~~~p~~~Ql~-------g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~ 115 (311)
+.+.|+.+-|. |.++++..+.++.++++|+|.|++..|.-.+..... ..+..-.+.++.+++.+++
T Consensus 217 G~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~-------~~~~~~~~~~~~ir~~~~i 289 (349)
T 3hgj_A 217 PRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIP-------LAPGFQVPFADAVRKRVGL 289 (349)
T ss_dssp CTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCC-------CCTTTTHHHHHHHHHHHCC
T ss_pred cCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccC-------CCccccHHHHHHHHHHcCc
Confidence 56789999887 567899999999999999999999865322111000 0111123456677777788
Q ss_pred eeEEEEeccCCCCCcHHHHHHHHHHHHHcC-CCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC
Q psy2386 116 DITVKHRIGIDDINSYDFVRDFVGTVSSAG-CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 184 (311)
Q Consensus 116 pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G-~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~ 184 (311)
||.+-= +..+ .+-+..+.+.| +|.|.+ ||... .|-+++.++++.+
T Consensus 290 PVi~~G--gi~t-------~e~a~~~l~~G~aD~V~i-GR~~l--------------anPdl~~k~~~~l 335 (349)
T 3hgj_A 290 RTGAVG--LITT-------PEQAETLLQAGSADLVLL-GRVLL--------------RDPYFPLRAAKAL 335 (349)
T ss_dssp EEEECS--SCCC-------HHHHHHHHHTTSCSEEEE-STHHH--------------HCTTHHHHHHHHT
T ss_pred eEEEEC--CCCC-------HHHHHHHHHCCCceEEEe-cHHHH--------------hCchHHHHHHHHC
Confidence 986521 1111 24455666666 998877 66431 1335577777765
No 424
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=93.70 E-value=0.39 Score=44.12 Aligned_cols=134 Identities=9% Similarity=0.010 Sum_probs=85.5
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccC
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGI 125 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~ 125 (311)
|+-..+.|.+++.+ +.+.+.||..+-+-.| ++ -.+.++++|+.+ ++.+.|-..-+|
T Consensus 121 ~~~~~~~g~~~e~~----~~~~~~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~ 177 (342)
T 2okt_A 121 AYGATASGLSNKQL----ESLKATKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESL 177 (342)
T ss_dssp ECEEEESSCCHHHH----HHHHHHCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCC
T ss_pred eeeEEEecCCHHHH----HHHHHcCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCC
Confidence 44444524444555 3334569999998654 23 347788888876 344555555566
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHH
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHL 205 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l 205 (311)
+.. +. ++++.+++.++.+|- +. .++.|++..++ +.. .+||.+.=.+.+..|+.+++
T Consensus 178 ~~~----~A-~~~~~l~~~~i~~iE---------------qP-~~~~d~~~~~~--~~~-~ipIa~dEs~~~~~~~~~~i 233 (342)
T 2okt_A 178 DRQ----DF-TQLQLLAREQVLYIE---------------EP-FKDISMLDEVA--DGT-IPPIALDEKATSLLDIINLI 233 (342)
T ss_dssp CGG----GH-HHHHHHGGGCEEEEE---------------CC-CSSGGGGGGSC--TTS-SCCEEESTTCCCHHHHHHHH
T ss_pred CHH----HH-HHHHHHhhCCCcEEE---------------CC-CCCccHHHHHH--hcC-CCCEEecCCCCCHHHHHHHH
Confidence 542 46 899999998877762 10 11224444444 444 69999988999999999998
Q ss_pred hh--cCEEEEehhhhhCCcchHHh
Q psy2386 206 NY--IDGVMLGREAYKNPFLMSNF 227 (311)
Q Consensus 206 ~~--adgVmigRa~l~~P~i~~~~ 227 (311)
+. +|.|++==+-.+...=..++
T Consensus 234 ~~~a~d~i~~k~~~~GGit~~~~i 257 (342)
T 2okt_A 234 ELYNVKVVVLKPFRLGGIDKVQTA 257 (342)
T ss_dssp HHSCCCEEEECHHHHTSGGGHHHH
T ss_pred HhCCCCEEEEChhhcCCHHHHHHH
Confidence 75 99999865555555433333
No 425
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.70 E-value=1 Score=42.25 Aligned_cols=132 Identities=9% Similarity=0.025 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEE---------Ee--ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEI---------NL--NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI 123 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~I---------di--N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~ 123 (311)
-..+.+....+.+++.|...+ |+ ..++|.-+ -||.-++|..++.++-+ .++||.+|.-.
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~K-----IgS~~~~N~pLL~~va~-----~gKPViLStGm 167 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFK-----IASYEINHLPLLKYVAR-----LNRPMIFSTAG 167 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEE-----ECGGGTTCHHHHHHHHT-----TCSCEEEECTT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEE-----ECcccccCHHHHHHHHh-----cCCeEEEECCC
Confidence 355777777788888775543 21 24677765 47777899998766543 58999998654
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCC-CEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCC-HHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGC-RTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKT-KKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~-~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s-~~da 201 (311)
. +.+++...++.+.+.|. +.+.+|+-+. |.- ....+|+..|..+++.+|++||..++--.. ..-+
T Consensus 168 a-----Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~-YPt-------p~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~ 234 (385)
T 1vli_A 168 A-----EISDVHEAWRTIRAEGNNQIAIMHCVAK-YPA-------PPEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAP 234 (385)
T ss_dssp C-----CHHHHHHHHHHHHTTTCCCEEEEEECSS-SSC-------CGGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHH
T ss_pred C-----CHHHHHHHHHHHHHCCCCcEEEEeccCC-CCC-------ChhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHH
Confidence 2 24466777888889998 6666785432 211 122368889999999876799976653333 3444
Q ss_pred HHHHhh-cC
Q psy2386 202 DLHLNY-ID 209 (311)
Q Consensus 202 ~~~l~~-ad 209 (311)
...... |+
T Consensus 235 ~AAvAlGA~ 243 (385)
T 1vli_A 235 CAAVRLGAK 243 (385)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHcCCC
Confidence 444433 66
No 426
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=93.69 E-value=0.17 Score=47.00 Aligned_cols=67 Identities=18% Similarity=0.267 Sum_probs=50.9
Q ss_pred HHHHHHHHHc--CCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEE
Q psy2386 135 RDFVGTVSSA--GCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGV 211 (311)
Q Consensus 135 ~e~~~~l~~~--G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgV 211 (311)
.+.++.+.+. |++.+.+|... |. +..-|+.++++++..|++||+. |+|.|+++++.+.+. +|+|
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~----g~--------~~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~a~~aGaD~I 186 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVAN----GY--------SEHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEELILSGADII 186 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSC----TT--------BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhccCCCCEEEEEecC----CC--------cHHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHHHhCCCEE
Confidence 3556666666 99999988432 11 1124789999999986789884 789999999999987 9999
Q ss_pred EEe
Q psy2386 212 MLG 214 (311)
Q Consensus 212 mig 214 (311)
.++
T Consensus 187 ~v~ 189 (351)
T 2c6q_A 187 KVG 189 (351)
T ss_dssp EEC
T ss_pred EEC
Confidence 886
No 427
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.67 E-value=4 Score=37.00 Aligned_cols=149 Identities=13% Similarity=0.048 Sum_probs=98.9
Q ss_pred CCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE-
Q psy2386 43 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH- 121 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi- 121 (311)
....|+++++++++.++..+.++.+++.|+|+|=+ -.|..+. -+.+-+.+-.++|.+++++||.+=-
T Consensus 91 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv--~~P~y~~----------~s~~~l~~~f~~va~a~~lPiilYn~ 158 (315)
T 3na8_A 91 AHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMV--LPISYWK----------LNEAEVFQHYRAVGEAIGVPVMLYNN 158 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE--CCCCSSC----------CCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE--CCCCCCC----------CCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 45689999999999999999999999999999988 4665431 2457778888888888899998764
Q ss_pred --eccCCCCCcHHHHHHHHHHH-HHcC-CCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCC
Q psy2386 122 --RIGIDDINSYDFVRDFVGTV-SSAG-CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIK 196 (311)
Q Consensus 122 --R~g~~~~~~~~~~~e~~~~l-~~~G-~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~ 196 (311)
|.|.+-. .+++.+| .+.+ +-+|.-. ..|+..+.++.+..+ ++.|+ +|+=.
T Consensus 159 P~~tg~~l~------~~~~~~L~a~~pnIvgiKds------------------sgd~~~~~~~~~~~~~~f~v~-~G~D~ 213 (315)
T 3na8_A 159 PGTSGIDMS------VELILRIVREVDNVTMVKES------------------TGDIQRMHKLRLLGEGRVPFY-NGCNP 213 (315)
T ss_dssp HHHHSCCCC------HHHHHHHHHHSTTEEEEEEC------------------SSCHHHHHHHHHHTTTCSCEE-ECCGG
T ss_pred cchhCcCCC------HHHHHHHHhcCCCEEEEECC------------------CCCHHHHHHHHHHcCCCEEEE-eCchH
Confidence 3444332 3555666 5542 2222211 026777778877653 35544 44422
Q ss_pred CHHHHHHHHh-hcCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 197 TKKEIDLHLN-YIDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 197 s~~da~~~l~-~adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
.+...+. +++|++.+.+.+ -|..+.++.+.+.
T Consensus 214 ---~~l~~l~~G~~G~is~~an~-~P~~~~~l~~a~~ 246 (315)
T 3na8_A 214 ---LALEAFVAGAKGWCSAAPNL-IPTLNGQLYQAVL 246 (315)
T ss_dssp ---GHHHHHHHTCSEEEESGGGT-CHHHHHHHHHHHH
T ss_pred ---HHHHHHHCCCCEEEechhhh-CHHHHHHHHHHHh
Confidence 1334443 499999998765 4777777666543
No 428
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=93.62 E-value=1.6 Score=38.47 Aligned_cols=87 Identities=24% Similarity=0.259 Sum_probs=52.1
Q ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEec-cCCC---
Q psy2386 52 VGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRI-GIDD--- 127 (311)
Q Consensus 52 l~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~-g~~~--- 127 (311)
++..+++. |..+++.|+|-|||+.+=.. + | | .|.. ..++.+++.+++||-|=||+ +-+.
T Consensus 6 vc~~s~~~----a~~A~~~GAdRIELc~~L~~-----G--G--l--TPS~--g~i~~~~~~~~ipv~vMIRPR~GdF~Ys 68 (256)
T 1twd_A 6 ICCYSMEC----ALTAQQNGADRVELCAAPKE-----G--G--L--TPSL--GVLKSVRQRVTIPVHPIIRPRGGDFCYS 68 (256)
T ss_dssp EEESSHHH----HHHHHHTTCSEEEECBCGGG-----T--C--B--CCCH--HHHHHHHHHCCSCEEEBCCSSSSCSCCC
T ss_pred EEeCCHHH----HHHHHHcCCCEEEEcCCccc-----C--C--C--CCCH--HHHHHHHHHcCCceEEEECCCCCCCcCC
Confidence 44445444 34566789999999843211 1 1 1 2322 23455566779999999987 2221
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCc
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARN 155 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt 155 (311)
+.+.+...+=++.+.+.|++.|.+-.-|
T Consensus 69 ~~E~~~M~~Di~~~~~~GadGvV~G~Lt 96 (256)
T 1twd_A 69 DGEFAAILEDVRTVRELGFPGLVTGVLD 96 (256)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeEC
Confidence 1223344455667889999999875443
No 429
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.60 E-value=1 Score=41.11 Aligned_cols=107 Identities=10% Similarity=0.115 Sum_probs=62.2
Q ss_pred ccCChHHHHHHHHHHhccccceeEEEEe-ccC-CC----CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCC
Q psy2386 95 LMTKPLLVSDCIKAMRDSVEIDITVKHR-IGI-DD----INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRK 168 (311)
Q Consensus 95 Ll~~~~~~~~iv~~v~~~~~~pvsvKiR-~g~-~~----~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~ 168 (311)
+..|-+...++++...+. ++.|-.-+- +|- .+ +..+-+..+..+.+++.|+|.|.+.=.|. -+.|..+ .
T Consensus 111 ~eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~-HG~Yk~~---~ 185 (323)
T 2isw_A 111 FDENVRITKEVVAYAHAR-SVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTS-HGAYKFK---S 185 (323)
T ss_dssp HHHHHHHHHHHHHHHHTT-TCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCC-SSSBCCC---C
T ss_pred HHHHHHHHHHHHHHHHHc-CCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCcc-ccccCCC---C
Confidence 345677777888777653 544443332 111 11 11111234555556789999998754442 1112200 1
Q ss_pred CCc--CcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 169 IPI--LKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 169 ~~~--~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
.+. .|++.+++|++.+ ++|++.-||=.-|++..+.++.
T Consensus 186 ~p~~~L~~~~L~~I~~~~-~vpLVlHGgSsvp~~~~~~~~~ 225 (323)
T 2isw_A 186 ESDIRLAIDRVKTISDLT-GIPLVMHGSSSVPKDVKDMINK 225 (323)
T ss_dssp ----CCCCHHHHHHHHHH-CSCEEECSCCCCCHHHHHHHHH
T ss_pred CcccccCHHHHHHHHHHh-CCCeEEECCCCCCHHHHHHHHH
Confidence 234 7899999999998 7999999988666666666654
No 430
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.48 E-value=0.5 Score=43.67 Aligned_cols=124 Identities=11% Similarity=0.033 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHH
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFV 134 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~ 134 (311)
=|.+.+.+-++.+.+.|+|+|=++ +..|-+..-..+.-.++++. ...-.+||.+-+- -. +.++.
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~----------GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg--~~---st~ea 107 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYC----------GSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTG--AV---NTASA 107 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEES----------SGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECC--CS---SHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeC----------ccCcChhhCCHHHHHHHHHH-HhCCCCcEEEecC--CC---CHHHH
Confidence 478889999998889999999887 22333333344444566665 2222678887543 22 23367
Q ss_pred HHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCcCcHHHHHHHHH-hCCCCeEE-Ee----cCCCCHHHHHHH
Q psy2386 135 RDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPILKYNFVYNLKK-DFPELEII-IN----GGIKTKKEIDLH 204 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~~~~~~i~~i~~-~~~~ipvi-~n----GgI~s~~da~~~ 204 (311)
+++++.+++.|+|++.+..-. |.. .+ ...-+++.++|++ +. ++||+ +| |---+++.+.++
T Consensus 108 i~la~~A~~~Gadavlv~~P~--y~~~~s-------~~~l~~~f~~IA~aa~-~lPiilYn~P~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 108 VAHAVHAQKVGAKGLMVIPRV--LSRGSV-------IAAQKAHFKAILSAAP-EIPAVIYNSPYYGFATRADLFFAL 174 (344)
T ss_dssp HHHHHHHHHHTCSEEEECCCC--SSSTTC-------HHHHHHHHHHHHHHST-TSCEEEEEBGGGTBCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCc--cCCCCC-------HHHHHHHHHHHHhhCC-CCcEEEEecCccCCCcCHHHHHHH
Confidence 899999999999999876432 111 11 0012456778888 66 68865 45 433577877777
No 431
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=93.46 E-value=1.6 Score=37.22 Aligned_cols=127 Identities=15% Similarity=0.053 Sum_probs=76.0
Q ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-ccee--EEEEec
Q psy2386 47 PIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDI--TVKHRI 123 (311)
Q Consensus 47 p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pv--svKiR~ 123 (311)
++++-+=-.+.++..+.++.+ +.|+|.+|+.+ |.. .. +| .++++++|+.. +.|+ .+|+-
T Consensus 8 ~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~--~~~--~~--~G----------~~~i~~lr~~~~~~~i~ld~~l~- 69 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNV-ASYVDVIEVGT--ILA--FA--EG----------MKAVSTLRHNHPNHILVCDMKTT- 69 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHH-GGGCSEEEECH--HHH--HH--HT----------THHHHHHHHHCTTSEEEEEEEEC-
T ss_pred CeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCc--HHH--Hh--cC----------HHHHHHHHHhCCCCcEEEEEeec-
Confidence 466666556677766666655 34799999974 221 11 12 25677777763 4454 55543
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCc-HHHHHHHHHhCCCCeEEE-ecCCCCHHHH
Q psy2386 124 GIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILK-YNFVYNLKKDFPELEIII-NGGIKTKKEI 201 (311)
Q Consensus 124 g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~-~~~i~~i~~~~~~ipvi~-nGgI~s~~da 201 (311)
+. ...+++.+.++|+|.+++|+-... .. .+.++.+++. ++++.. -=++.|++++
T Consensus 70 --d~------p~~~~~~~~~aGad~i~vh~~~~~--------------~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~ 125 (218)
T 3jr2_A 70 --DG------GAILSRMAFEAGADWITVSAAAHI--------------ATIAACKKVADEL--NGEIQIEIYGNWTMQDA 125 (218)
T ss_dssp --SC------HHHHHHHHHHHTCSEEEEETTSCH--------------HHHHHHHHHHHHH--TCEEEEECCSSCCHHHH
T ss_pred --cc------HHHHHHHHHhcCCCEEEEecCCCH--------------HHHHHHHHHHHHh--CCccceeeeecCCHHHH
Confidence 22 124678899999999999975420 01 2344455554 455443 3334678888
Q ss_pred HHHHhh-cCEEEEeh
Q psy2386 202 DLHLNY-IDGVMLGR 215 (311)
Q Consensus 202 ~~~l~~-adgVmigR 215 (311)
.++.+. +|.+.+..
T Consensus 126 ~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 126 KAWVDLGITQAIYHR 140 (218)
T ss_dssp HHHHHTTCCEEEEEC
T ss_pred HHHHHcCccceeeee
Confidence 888764 89776643
No 432
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.39 E-value=0.94 Score=41.88 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHcCCCEEEe-----------ccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCC
Q psy2386 58 KKLAKSAKIIQKWGYDEINL-----------NCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID 126 (311)
Q Consensus 58 ~~~~~aa~~~~~~g~d~Idi-----------N~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~ 126 (311)
+.+....+.+++.|...+-- ..++|.-+ -||.=++|..++.++- + .++||.+|.-..
T Consensus 78 e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~K-----I~S~~~~N~pLL~~va----~-~gKPviLstGms-- 145 (350)
T 3g8r_A 78 EQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIK-----IASCSFTDWPLLERIA----R-SDKPVVASTAGA-- 145 (350)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEE-----ECSSSTTCHHHHHHHH----T-SCSCEEEECTTC--
T ss_pred HHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEE-----ECcccccCHHHHHHHH----h-hCCcEEEECCCC--
Confidence 44555555555555433221 23455554 3666789998877654 2 589999976542
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe
Q psy2386 127 DINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN 192 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n 192 (311)
+.+++...++.+.+.|.+.+.+|+-+. |. . ....+|+..|..+++.+|++||..+
T Consensus 146 ---tl~Ei~~Ave~i~~~g~~viLlhC~s~-YP----t---~~~~~nL~aI~~Lk~~fp~lpVG~S 200 (350)
T 3g8r_A 146 ---RREDIDKVVSFMLHRGKDLTIMHCVAE-YP----T---PDDHLHLARIKTLRQQYAGVRIGYS 200 (350)
T ss_dssp ---CHHHHHHHHHHHHTTTCCEEEEECCCC-SS----C---CGGGCCTTHHHHHHHHCTTSEEEEE
T ss_pred ---CHHHHHHHHHHHHHcCCCEEEEecCCC-CC----C---CcccCCHHHHHHHHHHCCCCCEEcC
Confidence 244566777777888888666776532 21 1 1223688999999999877999766
No 433
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.39 E-value=0.22 Score=42.01 Aligned_cols=82 Identities=10% Similarity=0.003 Sum_probs=58.9
Q ss_pred ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC
Q psy2386 115 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG 194 (311)
Q Consensus 115 ~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg 194 (311)
.|+.+=+|.. + .++..++++.+.+.|++.|.+|-++. .-.+.++++++.+|.-.+++.|-
T Consensus 10 ~~~i~~~~~~-~----~~~~~~~~~~~~~~G~~~iev~~~~~---------------~~~~~i~~ir~~~~~~~~ig~~~ 69 (205)
T 1wa3_A 10 HKIVAVLRAN-S----VEEAKEKALAVFEGGVHLIEITFTVP---------------DADTVIKELSFLKEKGAIIGAGT 69 (205)
T ss_dssp HCEEEEECCS-S----HHHHHHHHHHHHHTTCCEEEEETTST---------------THHHHHHHTHHHHHTTCEEEEES
T ss_pred CCEEEEEecC-C----HHHHHHHHHHHHHCCCCEEEEeCCCh---------------hHHHHHHHHHHHCCCCcEEEecc
Confidence 4666666642 1 23578899999999999999997752 12356778887654223566778
Q ss_pred CCCHHHHHHHHhh-cCEEEEehhh
Q psy2386 195 IKTKKEIDLHLNY-IDGVMLGREA 217 (311)
Q Consensus 195 I~s~~da~~~l~~-adgVmigRa~ 217 (311)
+.+++++.+..+. +|.| ++-++
T Consensus 70 v~~~~~~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 70 VTSVEQCRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp CCSHHHHHHHHHHTCSEE-ECSSC
T ss_pred cCCHHHHHHHHHcCCCEE-EcCCC
Confidence 8999999988876 9999 76543
No 434
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.36 E-value=2.4 Score=39.12 Aligned_cols=131 Identities=8% Similarity=0.043 Sum_probs=87.3
Q ss_pred eEEEecC---CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCc-------ccCcc-------cCChHHHHHHHHHHh
Q psy2386 48 IAFQVGD---NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGF-------FGAIL-------MTKPLLVSDCIKAMR 110 (311)
Q Consensus 48 ~~~Ql~g---~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~-------~G~~L-------l~~~~~~~~iv~~v~ 110 (311)
+|.=++. .+.+...+.++.+.++|+|.|-...-.|-..++... .|..+ .-..+...++ ...+
T Consensus 22 iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L-~~~~ 100 (349)
T 2wqp_A 22 IICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKL-KEYV 100 (349)
T ss_dssp EEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHH-HHHH
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHH-HHHH
Confidence 4444543 267778888888889999999998665533211111 13322 1234454444 4445
Q ss_pred ccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEE
Q psy2386 111 DSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEII 190 (311)
Q Consensus 111 ~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi 190 (311)
+..++++..- -||. +-+..+++.|++.+.|-+|.- -|+.+++++.+. +.|||
T Consensus 101 ~~~Gi~~~st---~~d~--------~svd~l~~~~v~~~KI~S~~~---------------~n~~LL~~va~~--gkPvi 152 (349)
T 2wqp_A 101 ESKGMIFIST---LFSR--------AAALRLQRMDIPAYKIGSGEC---------------NNYPLIKLVASF--GKPII 152 (349)
T ss_dssp HHTTCEEEEE---ECSH--------HHHHHHHHHTCSCEEECGGGT---------------TCHHHHHHHHTT--CSCEE
T ss_pred HHhCCeEEEe---eCCH--------HHHHHHHhcCCCEEEECcccc---------------cCHHHHHHHHhc--CCeEE
Confidence 5568887542 2332 334556889999999998873 489999999874 78999
Q ss_pred EecCCCCHHHHHHHHhh
Q psy2386 191 INGGIKTKKEIDLHLNY 207 (311)
Q Consensus 191 ~nGgI~s~~da~~~l~~ 207 (311)
..=|..|.+++....+.
T Consensus 153 LstGmat~~Ei~~Ave~ 169 (349)
T 2wqp_A 153 LSTGMNSIESIKKSVEI 169 (349)
T ss_dssp EECTTCCHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHH
Confidence 99999999998877754
No 435
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.35 E-value=1.7 Score=40.61 Aligned_cols=142 Identities=7% Similarity=-0.021 Sum_probs=92.4
Q ss_pred CC-eEEEecCC---CHHHHHHHHHHHHHcCCCEEEeccCCCcccccc--------CcccCcc-------cCChHHHHHHH
Q psy2386 46 HP-IAFQVGDN---EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQN--------GFFGAIL-------MTKPLLVSDCI 106 (311)
Q Consensus 46 ~p-~~~Ql~g~---~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~--------~~~G~~L-------l~~~~~~~~iv 106 (311)
.| +|.=++.| +.+...+.++.+.++|+|.|-...-.|-..+.. +++|..+ .-..+...++.
T Consensus 28 ~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~ 107 (385)
T 1vli_A 28 PVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLL 107 (385)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHH
T ss_pred CcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHH
Confidence 44 55556444 566777777778889999999987766442221 1233322 12345554444
Q ss_pred HHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCC
Q psy2386 107 KAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPE 186 (311)
Q Consensus 107 ~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ 186 (311)
+. ++..++++.. .-||. +-+..+++.|++.+.|-+|.- -|+.+++++.+. +
T Consensus 108 ~~-~~~~Gi~~~s---tpfD~--------~svd~l~~~~vd~~KIgS~~~---------------~N~pLL~~va~~--g 158 (385)
T 1vli_A 108 DY-CREKQVIFLS---TVCDE--------GSADLLQSTSPSAFKIASYEI---------------NHLPLLKYVARL--N 158 (385)
T ss_dssp HH-HHHTTCEEEC---BCCSH--------HHHHHHHTTCCSCEEECGGGT---------------TCHHHHHHHHTT--C
T ss_pred HH-HHHcCCcEEE---ccCCH--------HHHHHHHhcCCCEEEECcccc---------------cCHHHHHHHHhc--C
Confidence 44 4446888743 22332 335566889999999998863 489999999874 7
Q ss_pred CeEEEecCCCCHHHHHHHHhh-----cCEEEEehh
Q psy2386 187 LEIIINGGIKTKKEIDLHLNY-----IDGVMLGRE 216 (311)
Q Consensus 187 ipvi~nGgI~s~~da~~~l~~-----adgVmigRa 216 (311)
.|||.+=|..|.+++....+. ++-|++--+
T Consensus 159 KPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc 193 (385)
T 1vli_A 159 RPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHC 193 (385)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 899999999999998877753 544566333
No 436
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=93.25 E-value=0.61 Score=42.16 Aligned_cols=139 Identities=11% Similarity=0.126 Sum_probs=84.1
Q ss_pred CCC-HHHHHHHHHHHHHcCCCEEEecc----------CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 54 DNE-PKKLAKSAKIIQKWGYDEINLNC----------GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 54 g~~-~~~~~~aa~~~~~~g~d~IdiN~----------gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
|-. .+.+....+.+++.|...+-==+ -++.- ..||..+++.+++.++ . .+++||.+|.-
T Consensus 94 Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~vd~l-----kIgA~~~~n~~LLr~v----a-~~gkPVilK~G 163 (298)
T 3fs2_A 94 GIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPVVDVL-----QIPAFLCRQTDLLIAA----A-RTGRVVNVKKG 163 (298)
T ss_dssp -CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTTCSEE-----EECGGGTTCHHHHHHH----H-HTTSEEEEECC
T ss_pred CcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhCCEE-----EECccccCCHHHHHHH----H-ccCCcEEEeCC
Confidence 444 35566666666777765543211 13333 3688899999976653 3 36899999966
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEe----------
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIIN---------- 192 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~n---------- 192 (311)
..-+. +++...++.+.+.|.+.|++.-|...+ +|. ...+|+..+..+++ + ++||+..
T Consensus 164 ms~t~----~ei~~ave~i~~~Gn~~iiL~erg~~y-~~~------~~~vdl~~i~~lk~-~-~~PV~~D~sHsvq~p~~ 230 (298)
T 3fs2_A 164 QFLAP----WDMKNVLAKITESGNPNVLATERGVSF-GYN------TLVSDMRALPIMAG-L-GAPVIFDATHSVQQPGG 230 (298)
T ss_dssp TTCCG----GGHHHHHHHHHTTTCCCEEEEECCEEC-SSS------CEECCTTHHHHHHT-T-TSCEEEEHHHHTCCCC-
T ss_pred CCCCH----HHHHHHHHHHHHcCCCeEEEEECCCCC-CCC------CCccCHHHHHHHHH-c-CCcEEEcCCCccccCCc
Confidence 53222 245677888899998877765444323 221 11258888988988 7 8999883
Q ss_pred -----cCCCC--HHHHHHHHhh-cCEEEEeh
Q psy2386 193 -----GGIKT--KKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 193 -----GgI~s--~~da~~~l~~-adgVmigR 215 (311)
||-+. +.-+...... |||++|=+
T Consensus 231 ~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~ 261 (298)
T 3fs2_A 231 QGGSTGGQREFVETLARAAVAVGVAGFFIET 261 (298)
T ss_dssp -------CGGGHHHHHHHHHHHCCSEEEEEE
T ss_pred ccCCCCCchhhHHHHHHHHHHcCCCEEEEEe
Confidence 23222 2223344444 99999863
No 437
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.21 E-value=1.6 Score=38.70 Aligned_cols=126 Identities=15% Similarity=0.202 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 135 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~ 135 (311)
|++...+.|+.+.++|++.|-...--|-+... ++-+ +. .+- .++++.+++..++|+..-+ ++..
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~--~~~g-~~--~eg-l~~l~~~~~~~Gl~~~te~---~d~~------- 98 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPY--SFQG-YG--EKA-LRWMREAADEYGLVTVTEV---MDTR------- 98 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTT--SCCC-CT--HHH-HHHHHHHHHHHTCEEEEEC---CCGG-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecccCCCcc--cccC-cc--HHH-HHHHHHHHHHcCCcEEEee---CCHH-------
Confidence 68888888999999999998776555533210 1111 11 333 3555666666799987632 2321
Q ss_pred HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCC-CHHHHHHHHhh-----c-
Q psy2386 136 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK-TKKEIDLHLNY-----I- 208 (311)
Q Consensus 136 e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~-s~~da~~~l~~-----a- 208 (311)
-++.+.+. ++.+.|-+|+. -++++++++.+ . +.||+..-|.. |++++....+. .
T Consensus 99 -~~~~l~~~-vd~~kIga~~~---------------~n~~ll~~~a~-~-~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~ 159 (262)
T 1zco_A 99 -HVELVAKY-SDILQIGARNS---------------QNFELLKEVGK-V-ENPVLLKRGMGNTIQELLYSAEYIMAQGNE 159 (262)
T ss_dssp -GHHHHHHH-CSEEEECGGGT---------------TCHHHHHHHTT-S-SSCEEEECCTTCCHHHHHHHHHHHHTTTCC
T ss_pred -hHHHHHhh-CCEEEECcccc---------------cCHHHHHHHHh-c-CCcEEEecCCCCCHHHHHHHHHHHHHCCCC
Confidence 13444667 99999999974 36788888887 4 79999888887 99998887753 3
Q ss_pred CEEEEehh
Q psy2386 209 DGVMLGRE 216 (311)
Q Consensus 209 dgVmigRa 216 (311)
+.+.+=||
T Consensus 160 ~i~L~~RG 167 (262)
T 1zco_A 160 NVILCERG 167 (262)
T ss_dssp CEEEEECC
T ss_pred eEEEEECC
Confidence 55555666
No 438
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=93.13 E-value=0.46 Score=41.53 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=65.8
Q ss_pred CeEEEecC-CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEecc
Q psy2386 47 PIAFQVGD-NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIG 124 (311)
Q Consensus 47 p~~~Ql~g-~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g 124 (311)
.+++-|.| .+.+++.+.++.+.+.|+|.||+=.=+ +.. .+++.+.+.++.+++.. ++|+.+=+|.-
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~---------l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~~ 72 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQ---------FEN---VTVDQVAEMITKLKVMQDSFKLLVTYRTK 72 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTT---------STT---CCHHHHHHHHHHHC---CCSEEEEECCBG
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecc---------ccc---CCHHHHHHHHHHHHHhccCCCEEEEeecc
Confidence 37889999 999998888888888899999996432 111 14678889999999887 78999989975
Q ss_pred CCCC---CcHHHHHHHHHHHHHc-CCCEEEEecC
Q psy2386 125 IDDI---NSYDFVRDFVGTVSSA-GCRTFIVHAR 154 (311)
Q Consensus 125 ~~~~---~~~~~~~e~~~~l~~~-G~~~itvh~R 154 (311)
|..+ .+.+...++.+.+.+. ++++|.|.-.
T Consensus 73 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~ 106 (238)
T 1sfl_A 73 LQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQ 106 (238)
T ss_dssp GGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 4322 1223456777777777 6999998643
No 439
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.09 E-value=0.89 Score=39.29 Aligned_cols=98 Identities=17% Similarity=0.211 Sum_probs=68.3
Q ss_pred HHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC
Q psy2386 105 CIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 184 (311)
Q Consensus 105 iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~ 184 (311)
+++.+++. |+..=+|.. +. ++..++++.+.+.|++.|.+.-++. ...+.++++++.+
T Consensus 10 ~~~~l~~~---~ii~vir~~-~~----~~~~~~~~al~~gGv~~iel~~k~~---------------~~~~~i~~l~~~~ 66 (224)
T 1vhc_A 10 IIEKLREL---KIVPVIALD-NA----DDILPLADTLAKNGLSVAEITFRSE---------------AAADAIRLLRANR 66 (224)
T ss_dssp HHHHHHHH---CEEEEECCS-SG----GGHHHHHHHHHHTTCCEEEEETTST---------------THHHHHHHHHHHC
T ss_pred HHHHHHHC---CeEEEEeCC-CH----HHHHHHHHHHHHcCCCEEEEeccCc---------------hHHHHHHHHHHhC
Confidence 44444443 566666752 21 2468999999999999999975542 2357888899988
Q ss_pred CCCeEEEecCCCCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHh
Q psy2386 185 PELEIIINGGIKTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 185 ~~ipvi~nGgI~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~ 229 (311)
|++ +++.|-+.+.+++...++. ||+|.++- .++.+....++
T Consensus 67 ~~l-~vgaGtvl~~d~~~~A~~aGAd~v~~p~---~d~~v~~~ar~ 108 (224)
T 1vhc_A 67 PDF-LIAAGTVLTAEQVVLAKSSGADFVVTPG---LNPKIVKLCQD 108 (224)
T ss_dssp TTC-EEEEESCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHH
T ss_pred cCc-EEeeCcEeeHHHHHHHHHCCCCEEEECC---CCHHHHHHHHH
Confidence 654 4566678899999999987 99998883 45555554443
No 440
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=93.09 E-value=0.13 Score=48.84 Aligned_cols=106 Identities=10% Similarity=0.071 Sum_probs=69.7
Q ss_pred HHHHHHHHhcccc--ceeEEEEec------cCCCCCcHHHHHHHHHHHHHcCCCE-EEEecCccccccCCCCcCCCCCcC
Q psy2386 102 VSDCIKAMRDSVE--IDITVKHRI------GIDDINSYDFVRDFVGTVSSAGCRT-FIVHARNAFLKKLNPKQNRKIPIL 172 (311)
Q Consensus 102 ~~~iv~~v~~~~~--~pvsvKiR~------g~~~~~~~~~~~e~~~~l~~~G~~~-itvh~Rt~~~~G~~g~~~~~~~~~ 172 (311)
..+.++++|+.++ +.+.+-..- +|+ .++..++++.|++.|+.. +-+---.. ...++.
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~----~~~A~~~~~~L~~~~~~~~l~iEqP~~----------~~~~~~ 283 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMD----PVRCAEYIASLEKEAQGLPLYIEGPVD----------AGNKPD 283 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTC----HHHHHHHHHHTGGGGTTSCEEEECCCC----------CSSHHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCCC----HHHHHHHHHHHHhccCCcceEEECCcC----------CCCCcc
Confidence 4488899988874 444444333 343 345778999999876541 12210000 000134
Q ss_pred cHHHHHHHHHh-----CCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCc
Q psy2386 173 KYNFVYNLKKD-----FPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPF 222 (311)
Q Consensus 173 ~~~~i~~i~~~-----~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~ 222 (311)
||+..+++++. . .+||.+.=-+.+++++.++++. +|.|++=-.-.+...
T Consensus 284 d~~~~~~l~~~l~~~g~-~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit 339 (413)
T 1kko_A 284 QIRMLTAITKELTRLGS-GVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIH 339 (413)
T ss_dssp HHHHHHHHHHHHHHHTC-CCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSSTH
T ss_pred cHHHHHHHHHhcccCCC-CCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHH
Confidence 88888999887 7 6999998889999999999975 999998655544443
No 441
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=93.04 E-value=0.38 Score=45.93 Aligned_cols=77 Identities=5% Similarity=0.047 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccC---ChHHHHHHHHHHhc---c--ccceeEEEEeccCC
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMT---KPLLVSDCIKAMRD---S--VEIDITVKHRIGID 126 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~---~~~~~~~iv~~v~~---~--~~~pvsvKiR~g~~ 126 (311)
.+++...+-|+...+.|+|.||||+-.-- -|+.... ..+.+..+++++++ . +++|+||-..-
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTr-------PGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~--- 278 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTK-------PDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRK--- 278 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCC-------C----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCC---
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-------CCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCC---
Confidence 44555566666666779999999943221 2333332 33455556888876 3 47899986442
Q ss_pred CCCcHHHHHHHHHHHHH--cCCCE-E
Q psy2386 127 DINSYDFVRDFVGTVSS--AGCRT-F 149 (311)
Q Consensus 127 ~~~~~~~~~e~~~~l~~--~G~~~-i 149 (311)
.+.++...+ +|++. |
T Consensus 279 --------~~VaeaAL~~~aGa~i~I 296 (442)
T 3mcm_A 279 --------LEVMQKILAKHHDIIWMI 296 (442)
T ss_dssp --------HHHHHHHHHHHGGGCCEE
T ss_pred --------HHHHHHHHhhCCCCCEEE
Confidence 366777777 89987 6
No 442
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.94 E-value=1.6 Score=39.20 Aligned_cols=139 Identities=9% Similarity=-0.083 Sum_probs=76.1
Q ss_pred HHHHHHHcCCCEEEeccCCCcccc-------ccC------cccCcccCC--hHHHHHHHHHHhccc--cceeEEEEeccC
Q psy2386 63 SAKIIQKWGYDEINLNCGCPSNRV-------QNG------FFGAILMTK--PLLVSDCIKAMRDSV--EIDITVKHRIGI 125 (311)
Q Consensus 63 aa~~~~~~g~d~IdiN~gCP~~~v-------~~~------~~G~~Ll~~--~~~~~~iv~~v~~~~--~~pvsvKiR~g~ 125 (311)
..+.+.+.|+..|.+-+-.+.+.. ..- .+| +++ .+.+.+.+...++.. +.|+.+-+. |
T Consensus 28 ~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g---~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~-g- 102 (311)
T 1jub_A 28 DLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMG---LPNLGFDYYLDYVLKNQKENAQEGPIFFSIA-G- 102 (311)
T ss_dssp HHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCC---CCBSCHHHHHHHHHHHHHHTCSSSCCEEEEC-C-
T ss_pred HHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCC---CCCccHHHHHHHHHHHHHhcCCCCCEEEEcC-C-
Confidence 335567889888887665544321 000 011 122 233333344343334 688887665 2
Q ss_pred CCCCcHHHHHHHHHHHHHcCCC-EEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE--ecCCCCHHHHH
Q psy2386 126 DDINSYDFVRDFVGTVSSAGCR-TFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII--NGGIKTKKEID 202 (311)
Q Consensus 126 ~~~~~~~~~~e~~~~l~~~G~~-~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~--nGgI~s~~da~ 202 (311)
...+++.+.++.++++|+| +|.+|--.....|.+ .-...+..-++.++++++.+ ++||+. +.++ +.+++.
T Consensus 103 ---~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~--~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~-~~~~~~ 175 (311)
T 1jub_A 103 ---MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEP--QLAYDFEATEKLLKEVFTFF-TKPLGVKLPPYF-DLVHFD 175 (311)
T ss_dssp ---SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCC--CGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCC-SHHHHH
T ss_pred ---CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcc--cccCCHHHHHHHHHHHHHhc-CCCEEEEECCCC-CHHHHH
Confidence 2234678999999999999 999984321111100 00000011256788888776 789874 5555 666653
Q ss_pred H---HHhh--cCEEEE
Q psy2386 203 L---HLNY--IDGVML 213 (311)
Q Consensus 203 ~---~l~~--adgVmi 213 (311)
+ .++. +|+|.+
T Consensus 176 ~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 176 IMAEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHHHTTSCCCEEEE
T ss_pred HHHHHHHHcCCcEEEe
Confidence 3 3332 999876
No 443
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.89 E-value=1.2 Score=41.06 Aligned_cols=129 Identities=10% Similarity=0.106 Sum_probs=90.0
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING 193 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG 193 (311)
+-|+.|--=+ .++..+.+.+++-+..|.++|++.|-+.--+. .+.+.+.++++.. ++|++ +
T Consensus 29 ~~Pi~VQSMt-nt~T~D~~atv~Qi~~l~~aG~diVRvavp~~---------------~~a~al~~I~~~~-~vPlv--a 89 (366)
T 3noy_A 29 DAPIVVQSMT-STKTHDVEATLNQIKRLYEAGCEIVRVAVPHK---------------EDVEALEEIVKKS-PMPVI--A 89 (366)
T ss_dssp TSCCEEEEEC-CSCTTCHHHHHHHHHHHHHTTCCEEEEECCSH---------------HHHHHHHHHHHHC-SSCEE--E
T ss_pred CCcEEEEEec-CCCCcCHHHHHHHHHHHHHcCCCEEEeCCCCh---------------HHHHHHHHHHhcC-CCCEE--E
Confidence 4566664333 23333455778889999999999997753321 2457788999887 68987 5
Q ss_pred CC-CCHHHHHHHHhh-cCEEEEehhhhhCCcchHHhHhhhccCCCC-----------------CCCCCHHHHHHHHHHHH
Q psy2386 194 GI-KTKKEIDLHLNY-IDGVMLGREAYKNPFLMSNFDLNYYSNLPQ-----------------YKIPTRIDIINRMILYI 254 (311)
Q Consensus 194 gI-~s~~da~~~l~~-adgVmigRa~l~~P~i~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~ 254 (311)
|| +++.-+.+.++. +|.+=|-=|-+++++-|.++.+.....+.+ +..++++..++..++|+
T Consensus 90 DiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~ 169 (366)
T 3noy_A 90 DIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWS 169 (366)
T ss_dssp ECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHH
Confidence 88 899999999987 999999999999888777764332211110 11367777888888888
Q ss_pred HHHHhcC
Q psy2386 255 RQQLNNN 261 (311)
Q Consensus 255 ~~~~~~g 261 (311)
+...+.|
T Consensus 170 ~~~e~~g 176 (366)
T 3noy_A 170 EKFEKWG 176 (366)
T ss_dssp HHHHHTT
T ss_pred HHHHhCC
Confidence 8766543
No 444
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.86 E-value=0.37 Score=43.28 Aligned_cols=60 Identities=12% Similarity=0.115 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCc---ccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAI---LMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~---Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
.+++...+.|+...+.|+|.||||.-..- -|+. .....+.+..+++++++. ++||||-..
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestr-------pga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~ 88 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSR-------PGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTM 88 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC---------------------HHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCC-------CCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCC
Confidence 36788888888888889999999942211 1222 234456677777777765 899999753
No 445
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=92.85 E-value=0.68 Score=41.78 Aligned_cols=145 Identities=8% Similarity=-0.014 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCC-CccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCC----CCC
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGC-PSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID----DIN 129 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gC-P~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~----~~~ 129 (311)
.+.+.+.+| .++|++.|.+-.++ +.. .+...+-...++.+.+.++++.+++. ++.|.+-+..-+. ...
T Consensus 84 ~~~~~i~~a----~~aG~~~v~i~~~~s~~~--~~~~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~ 156 (302)
T 2ftp_A 84 PNLKGFEAA----LESGVKEVAVFAAASEAF--SQRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGDV 156 (302)
T ss_dssp CSHHHHHHH----HHTTCCEEEEEEESCHHH--HHHHHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBCC
T ss_pred CCHHHHHHH----HhCCcCEEEEEEecCHHH--HHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCC
Confidence 566655444 45799999885444 221 11112333445566777777777664 6666544433221 112
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec--CCCC-HHHHHHHHh
Q psy2386 130 SYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING--GIKT-KKEIDLHLN 206 (311)
Q Consensus 130 ~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG--gI~s-~~da~~~l~ 206 (311)
+.+.+.++++.+.+.|++.|.+-.-. |+. .|....+.++++++.+|++|+..-| |--. .+.+...++
T Consensus 157 ~~~~~~~~~~~~~~~G~d~i~l~DT~----G~~------~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~ 226 (302)
T 2ftp_A 157 DPRQVAWVARELQQMGCYEVSLGDTI----GVG------TAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLL 226 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESS----SCC------CHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC----CCc------CHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHH
Confidence 34678899999999999999886222 221 1224578899999988678887766 4332 233444454
Q ss_pred h-cCEEEEehh
Q psy2386 207 Y-IDGVMLGRE 216 (311)
Q Consensus 207 ~-adgVmigRa 216 (311)
. ++.|-..=+
T Consensus 227 aGa~~vd~tv~ 237 (302)
T 2ftp_A 227 EGIAVFDSSVA 237 (302)
T ss_dssp TTCCEEEEBGG
T ss_pred hCCCEEEeccc
Confidence 4 777666543
No 446
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=92.81 E-value=0.66 Score=42.04 Aligned_cols=156 Identities=11% Similarity=0.063 Sum_probs=86.4
Q ss_pred HHHHHHHcCCCEEEec-cCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHHHHHHHHH
Q psy2386 63 SAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDFVRDFVGT 140 (311)
Q Consensus 63 aa~~~~~~g~d~IdiN-~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~~~e~~~~ 140 (311)
.|++++++|||.|=+- .+.-. +. -|+-...+-..+.+..-++.|.+.+ ++||++-+-.|+-+ .+...+.++.
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~--~~-~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~---~~~v~~tv~~ 103 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAA--SV-HGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGG---PIMVARTTEQ 103 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHH--HH-HSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSS---HHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHH--HH-cCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCC---HHHHHHHHHH
Confidence 5678889999998773 11100 00 0111122234455566667777764 89999999999743 2356788999
Q ss_pred HHHcCCCEEEEecCccc-cccCC-CCcCCCCCcCcH-HHHHHHHHh-------CCCCeEEEecCCC---CHHHHHHHH--
Q psy2386 141 VSSAGCRTFIVHARNAF-LKKLN-PKQNRKIPILKY-NFVYNLKKD-------FPELEIIINGGIK---TKKEIDLHL-- 205 (311)
Q Consensus 141 l~~~G~~~itvh~Rt~~-~~G~~-g~~~~~~~~~~~-~~i~~i~~~-------~~~ipvi~nGgI~---s~~da~~~l-- 205 (311)
++++|+++|.+-+.+.. ..|.. |+ ...+. +.+.+|+.. -+++-|++==|.. ..+++.+-.
T Consensus 104 l~~aGaagv~iEDq~~~Krcgh~~gk-----~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~a 178 (302)
T 3fa4_A 104 YSRSGVAAFHIEDQVQTKRCGHLAGK-----ILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRA 178 (302)
T ss_dssp HHHTTCCEEEECSBCCC-------CC-----CBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHcCCcEEEECCCCCCcccCCCCCC-----eecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHH
Confidence 99999999999876421 11211 11 11233 344444322 1344455544543 234443332
Q ss_pred --hh-cCEEEEehhhhhCCcchHHhHhhh
Q psy2386 206 --NY-IDGVMLGREAYKNPFLMSNFDLNY 231 (311)
Q Consensus 206 --~~-adgVmigRa~l~~P~i~~~~~~~~ 231 (311)
+. ||+|++= | +.++.-++++.+.+
T Consensus 179 y~eAGAD~ifi~-g-~~~~~ei~~~~~~~ 205 (302)
T 3fa4_A 179 ARDAGADVGFLE-G-ITSREMARQVIQDL 205 (302)
T ss_dssp HHTTTCSEEEET-T-CCCHHHHHHHHHHT
T ss_pred HHHcCCCEEeec-C-CCCHHHHHHHHHHh
Confidence 22 9999983 1 35555555555443
No 447
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=92.80 E-value=0.066 Score=50.76 Aligned_cols=104 Identities=11% Similarity=0.104 Sum_probs=70.1
Q ss_pred HHHHHHHHhcccc--ceeEEEEecc------CCCCCcHHHHHHHHHHHHHc--CCC-EEEEecCccccccCCCCcCCCCC
Q psy2386 102 VSDCIKAMRDSVE--IDITVKHRIG------IDDINSYDFVRDFVGTVSSA--GCR-TFIVHARNAFLKKLNPKQNRKIP 170 (311)
Q Consensus 102 ~~~iv~~v~~~~~--~pvsvKiR~g------~~~~~~~~~~~e~~~~l~~~--G~~-~itvh~Rt~~~~G~~g~~~~~~~ 170 (311)
-.+.++++|+.++ +.+.+-..-+ |+ .++..++++.+++. ++. +|- .+-.. ..+
T Consensus 218 d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~~----~~~a~~~~~~L~~~~~~i~~~iE-qP~~~-----------~~~ 281 (413)
T 1kcz_A 218 LRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVD----IKAMADYIQTLAEAAKPFHLRIE-GPMDV-----------EDR 281 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTC----HHHHHHHHHHHHHHHTTSCEEEE-CSBCC-----------SSH
T ss_pred HHHHHHHHHHhcCCCceEEEecCCCcccccCCC----HHHHHHHHHHHHhhcCCcceEEe-cCCCC-----------CCC
Confidence 4577889988764 4444444434 43 33578899999987 555 441 10000 001
Q ss_pred cCcHHHHHHHHHh-----CCCCeEEEecCCCCHHHHHHHHhh--cCEEEEehhhhhCCc
Q psy2386 171 ILKYNFVYNLKKD-----FPELEIIINGGIKTKKEIDLHLNY--IDGVMLGREAYKNPF 222 (311)
Q Consensus 171 ~~~~~~i~~i~~~-----~~~ipvi~nGgI~s~~da~~~l~~--adgVmigRa~l~~P~ 222 (311)
+-||+..+++++. . .+||.+-=-+.+++++.++++. +|.|++=-.-.+...
T Consensus 282 ~~d~~~~~~l~~~l~~~g~-~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit 339 (413)
T 1kcz_A 282 QKQMEAMRDLRAELDGRGV-DAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVN 339 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTC-CEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTH
T ss_pred cccHHHHHHHHHhhhcCCC-CCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHH
Confidence 2378888999987 6 6999988889999999999975 999998655555443
No 448
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=92.79 E-value=0.67 Score=40.99 Aligned_cols=84 Identities=14% Similarity=0.115 Sum_probs=61.3
Q ss_pred HHHHHHHcCCCEEEecc-CCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHH
Q psy2386 63 SAKIIQKWGYDEINLNC-GCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTV 141 (311)
Q Consensus 63 aa~~~~~~g~d~IdiN~-gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l 141 (311)
.|++++++|||.|=+-- +.-. .-|+-....-..+.+...+++|.+.++.||++-+-.|+... . .+.++.+
T Consensus 32 sA~~~~~aG~dai~vg~~s~a~----~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~----~-~~~~~~l 102 (255)
T 2qiw_A 32 SAGLVEEAGFSGLTIGSHPVAD----ATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLS----P-ADLIAQI 102 (255)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH----HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCC----H-HHHHHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHH----hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcH----H-HHHHHHH
Confidence 46778889999987751 2211 12344444556777888888888888999999999995432 1 6778889
Q ss_pred HHcCCCEEEEecCc
Q psy2386 142 SSAGCRTFIVHARN 155 (311)
Q Consensus 142 ~~~G~~~itvh~Rt 155 (311)
.++|+++|.+-+..
T Consensus 103 ~~aGa~gv~iEd~~ 116 (255)
T 2qiw_A 103 LEAGAVGINVEDVV 116 (255)
T ss_dssp HHTTCCEEEECSEE
T ss_pred HHcCCcEEEECCCC
Confidence 99999999997654
No 449
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=92.73 E-value=0.46 Score=44.06 Aligned_cols=42 Identities=26% Similarity=0.436 Sum_probs=36.7
Q ss_pred CcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 170 PILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 170 ~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
+...|+.++.+++.. ++||+.-| +.++++++.+.+. +|+|.+
T Consensus 202 ~~~~w~~i~~lr~~~-~~PvivK~-v~~~e~A~~a~~~GaD~I~v 244 (352)
T 3sgz_A 202 ASFCWNDLSLLQSIT-RLPIILKG-ILTKEDAELAMKHNVQGIVV 244 (352)
T ss_dssp TTCCHHHHHHHHHHC-CSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHhc-CCCEEEEe-cCcHHHHHHHHHcCCCEEEE
Confidence 557899999999998 79997764 6899999999887 999998
No 450
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=92.65 E-value=0.39 Score=40.68 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=57.8
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCe-EEEe
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELE-IIIN 192 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ip-vi~n 192 (311)
..|+..-++. .+ .+++.+.++.+.+.|++.|.+.-.+. ...+.++++++.+ ++| +++.
T Consensus 6 ~~~i~~~i~~-~d----~~~~~~~~~~~~~~G~~~i~l~~~~~---------------~~~~~i~~i~~~~-~~~l~vg~ 64 (212)
T 2v82_A 6 KLPLIAILRG-IT----PDEALAHVGAVIDAGFDAVEIPLNSP---------------QWEQSIPAIVDAY-GDKALIGA 64 (212)
T ss_dssp SSCEEEECTT-CC----HHHHHHHHHHHHHHTCCEEEEETTST---------------THHHHHHHHHHHH-TTTSEEEE
T ss_pred CCCEEEEEeC-CC----HHHHHHHHHHHHHCCCCEEEEeCCCh---------------hHHHHHHHHHHhC-CCCeEEEe
Confidence 3455554442 11 33578899999999999998854431 2356788888776 455 4567
Q ss_pred cCCCCHHHHHHHHhh-cCEEEEeh
Q psy2386 193 GGIKTKKEIDLHLNY-IDGVMLGR 215 (311)
Q Consensus 193 GgI~s~~da~~~l~~-adgVmigR 215 (311)
|.+.+.+++..+++. ||+|.+|.
T Consensus 65 g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 65 GTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp ECCCSHHHHHHHHHTTCCEEECSS
T ss_pred ccccCHHHHHHHHHcCCCEEEeCC
Confidence 899999999988876 99998764
No 451
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=92.63 E-value=0.26 Score=45.03 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=39.3
Q ss_pred CCeEEEecCCCH------------HHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc
Q psy2386 46 HPIAFQVGDNEP------------KKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV 113 (311)
Q Consensus 46 ~p~~~Ql~g~~~------------~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~ 113 (311)
+|.|.=|.--+| +...+-|+...+.|+|.||||+-.--+ |..-...+..+.+..+++++++.+
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrP-----G~~v~~~eEl~Rv~pvI~~l~~~~ 115 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGP-----GERVDVDTEITRLVPFIEWLRGAY 115 (318)
T ss_dssp SCEEEEEEC--------------CHHHHHHHHHHHHTTCSEEEEC---------------CHHHHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEEeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCC-----CCCCCHHHHHHHHHHHHHHHHhhC
Confidence 566655554444 444455556667899999999533111 000111233445666688888876
Q ss_pred -cceeEEEEe
Q psy2386 114 -EIDITVKHR 122 (311)
Q Consensus 114 -~~pvsvKiR 122 (311)
++|+||-..
T Consensus 116 ~~vpISIDT~ 125 (318)
T 2vp8_A 116 PDQLISVDTW 125 (318)
T ss_dssp TTCEEEEECS
T ss_pred CCCeEEEeCC
Confidence 899999643
No 452
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=92.62 E-value=0.38 Score=43.48 Aligned_cols=59 Identities=14% Similarity=0.166 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCccc---CChHHHHHHHHHHhccccceeEEEEe
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM---TKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll---~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
+++...+-|+...+.|+|.||||+-..-| |+... ...+.+..+++++++. ++|++|-..
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeSTrP-------ga~~v~~~eE~~Rv~pvi~~l~~~-~vpiSIDT~ 105 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGESTRP-------GAPPVPLDEELARVIPLVEALRPL-NVPLSIDTY 105 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCCST-------TCCCCCHHHHHHHHHHHHHHHGGG-CSCEEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHhhC-CCeEEEECC
Confidence 44555666666777899999999633211 22222 3345566667777665 899999753
No 453
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=92.62 E-value=2.5 Score=38.31 Aligned_cols=107 Identities=10% Similarity=0.112 Sum_probs=63.2
Q ss_pred ccCChHHHHHHHHHHhccccceeEEEEe-cc-CCCC-------CcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCc
Q psy2386 95 LMTKPLLVSDCIKAMRDSVEIDITVKHR-IG-IDDI-------NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ 165 (311)
Q Consensus 95 Ll~~~~~~~~iv~~v~~~~~~pvsvKiR-~g-~~~~-------~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~ 165 (311)
+..|-+...++++...+. ++.|-.-+- +| ..++ ..+-+..+..+.+++.|+|.|.+.=.|. -+.|.++
T Consensus 110 ~eeNi~~Tk~vv~~ah~~-gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~-HG~Yk~~- 186 (307)
T 3n9r_A 110 FEENLELTSKVVKMAHNA-GVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTS-HGAFKFK- 186 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCC-SSSBCCS-
T ss_pred HHHHHHHHHHHHHHHHHc-CCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCc-ccccCCC-
Confidence 345667777888777653 555444332 11 1110 0011233444555779999998754432 1112111
Q ss_pred CCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 166 NRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 166 ~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
..+..|++.+++|++.. ++|++.-|+=.-|++..+.++.
T Consensus 187 --~~p~Ld~~~L~~I~~~~-~~PLVlHGgS~vp~~~~~~~~~ 225 (307)
T 3n9r_A 187 --GEPKLDFERLQEVKRLT-NIPLVLHGASAIPDNVRKSYLD 225 (307)
T ss_dssp --SSCCCCHHHHHHHHHHH-CSCEEESSCCCCCHHHHHHHHH
T ss_pred --CCCccCHHHHHHHHhcC-CCCeEEeCCCCcchHHHHHHHH
Confidence 12458999999997765 7999999988777777777654
No 454
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.58 E-value=0.33 Score=43.88 Aligned_cols=85 Identities=9% Similarity=0.103 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-C-CCeEEEecCCCCHHHHHHHHhh-
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-P-ELEIIINGGIKTKKEIDLHLNY- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~-~ipvi~nGgI~s~~da~~~l~~- 207 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ . ++|||+.=|=.|.+++.++.+.
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 27 EQSYARLIKRQIENGIDAVVPVGTTGESATLTHE-------EHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFA 99 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHH
Confidence 4467888999999999999999888633332211 1123455555543 2 5899876555566666665532
Q ss_pred ----cCEEEEehhhhhCCc
Q psy2386 208 ----IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ----adgVmigRa~l~~P~ 222 (311)
+|+||+-...|..|.
T Consensus 100 ~~~Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 100 KEHGADGILSVAPYYNKPT 118 (301)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEEcCCCCCCCC
Confidence 999999999888774
No 455
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.56 E-value=0.4 Score=43.05 Aligned_cols=85 Identities=12% Similarity=0.118 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 20 FDGLEENINFLIENGVSGIVAVGTTGESPTLSHE-------EHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 3457788999999999999999888633333211 1224455555443 2599875544445555555543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. +|+||+-...|..|.
T Consensus 93 ~~Gadavlv~~P~y~~~s 110 (289)
T 2yxg_A 93 DVGADAVLSITPYYNKPT 110 (289)
T ss_dssp HHTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 2 999999999887774
No 456
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=92.54 E-value=0.38 Score=43.30 Aligned_cols=85 Identities=9% Similarity=0.128 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~ 93 (291)
T 3a5f_A 21 FDKLSELIEWHIKSKTDAIIVCGTTGEATTMTET-------ERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAE 93 (291)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHH
Confidence 4567788999999999999999988633333211 1224455555443 2589876544455566655543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 94 ~~Gadavlv~~P~y~~~s 111 (291)
T 3a5f_A 94 SIGVDGLLVITPYYNKTT 111 (291)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEEcCCCCCCCC
Confidence 2 999999999887774
No 457
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.50 E-value=0.45 Score=43.09 Aligned_cols=85 Identities=11% Similarity=0.172 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 36 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 36 IAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAA-------EKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAA 108 (304)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999988632222211 1223455555443 2599876544455566655543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 109 ~~Gadavlv~~P~y~~~~ 126 (304)
T 3cpr_A 109 SAGADGLLVVTPYYSKPS 126 (304)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 2 999999999887774
No 458
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.49 E-value=0.48 Score=42.96 Aligned_cols=85 Identities=11% Similarity=0.139 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ .++|||+.-|=.|.+++.++.+.
T Consensus 35 ~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 35 TATAARLANHLVDQGCDGLVVSGTTGESPTTTDG-------EKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACA 107 (304)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccchhhCCHH-------HHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 4567888999999999999999888633333211 1223455555543 35899876555566666665532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
||+||+-...|..|.
T Consensus 108 ~~Gadavlv~~P~y~~~s 125 (304)
T 3l21_A 108 AEGAHGLLVVTPYYSKPP 125 (304)
T ss_dssp HHTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECCCCCCCCC
Confidence 999999998888774
No 459
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=92.46 E-value=0.48 Score=42.91 Aligned_cols=85 Identities=12% Similarity=0.001 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 31 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~e-------Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 31 KASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLS-------EREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAK 103 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECeeccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999888633333211 1223455555443 2599986544445555555443
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 104 ~~Gadavlv~~P~y~~~s 121 (303)
T 2wkj_A 104 RYGFDAVSAVTPFYYPFS 121 (303)
T ss_dssp HHTCSEEEEECCCSSCCC
T ss_pred hCCCCEEEecCCCCCCCC
Confidence 2 999999998887774
No 460
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.43 E-value=0.89 Score=40.74 Aligned_cols=193 Identities=10% Similarity=0.003 Sum_probs=101.7
Q ss_pred CCHHHHHHHHHhCCCcEEEeccee---cccc--cCCchhcccc-CC-CCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEE
Q psy2386 4 TDRHCRMFHRQITRYSWLYTEMFT---TQAI--LGNKKHCLDF-NA-EEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEIN 76 (311)
Q Consensus 4 td~~fR~l~~~~g~~~l~~temv~---a~~l--~~~~~~~l~~-~~-~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~Id 76 (311)
|....+.+++.+-..++-+-|.-+ .+.+ +.+....++. .. ...++ +....+.+.+ +.+.++|++.|.
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v--~~l~~n~~~i----~~a~~~G~~~V~ 97 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRY--SVLVPNMKGY----EAAAAAHADEIA 97 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEE--EEECSSHHHH----HHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEE--EEEeCCHHHH----HHHHHCCCCEEE
Confidence 334456666666544555555543 2211 1122222211 11 23333 3444565554 445568999988
Q ss_pred eccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccC--C--CCCcHHHHHHHHHHHHHcCCCEEEEe
Q psy2386 77 LNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGI--D--DINSYDFVRDFVGTVSSAGCRTFIVH 152 (311)
Q Consensus 77 iN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~--~--~~~~~~~~~e~~~~l~~~G~~~itvh 152 (311)
+-.+.. ....+...+-...++.+.+.++++.+++. +++|.+-+..-+ . ...+.+.+.++++.+.+.|++.|.+-
T Consensus 98 i~~~~S-~~h~~~~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 175 (295)
T 1ydn_A 98 VFISAS-EGFSKANINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG 175 (295)
T ss_dssp EEEESC-HHHHHHHTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEEecC-HHHHHHHcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec
Confidence 854221 11111112222334556667777777664 677664444322 1 11234578899999999999999886
Q ss_pred cCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec--CCC-CHHHHHHHHhh-cCEEEEe
Q psy2386 153 ARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING--GIK-TKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 153 ~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG--gI~-s~~da~~~l~~-adgVmig 214 (311)
.-. |.. .|....+.++++++.+|++|+..-| |-- ..+.+...++. ++.|-+.
T Consensus 176 Dt~----G~~------~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~s 231 (295)
T 1ydn_A 176 DTI----GRG------TPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDAS 231 (295)
T ss_dssp ETT----SCC------CHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEB
T ss_pred CCC----CCc------CHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEec
Confidence 321 211 1224578899999888547876655 322 12334444443 6666554
No 461
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.40 E-value=3 Score=38.55 Aligned_cols=84 Identities=10% Similarity=0.164 Sum_probs=62.1
Q ss_pred CCCCeEEEecCCC----HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEE
Q psy2386 44 EEHPIAFQVGDNE----PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITV 119 (311)
Q Consensus 44 ~~~p~~~Ql~g~~----~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsv 119 (311)
.+.|+.||=+.++ .+...+-++.+.++|+|.|++ ++|.. ...+.+..+++.+++|+.+
T Consensus 28 G~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRv--avp~~----------------~~a~al~~I~~~~~vPlva 89 (366)
T 3noy_A 28 GDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRV--AVPHK----------------EDVEALEEIVKKSPMPVIA 89 (366)
T ss_dssp TTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEE--ECCSH----------------HHHHHHHHHHHHCSSCEEE
T ss_pred CCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEe--CCCCh----------------HHHHHHHHHHhcCCCCEEE
Confidence 4689999988654 566666666788899999999 44532 2256778888889999999
Q ss_pred EEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCc
Q psy2386 120 KHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARN 155 (311)
Q Consensus 120 KiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt 155 (311)
-+-.. ..++....++|+|.+-+.+..
T Consensus 90 DiHf~----------~~lal~a~e~G~dklRINPGN 115 (366)
T 3noy_A 90 DIHFA----------PSYAFLSMEKGVHGIRINPGN 115 (366)
T ss_dssp ECCSC----------HHHHHHHHHTTCSEEEECHHH
T ss_pred eCCCC----------HHHHHHHHHhCCCeEEECCcc
Confidence 76541 245666789999999887654
No 462
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=92.38 E-value=0.41 Score=43.12 Aligned_cols=85 Identities=14% Similarity=0.147 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 20 YEALGNLIEFHVDNGTDAILVCGTTGESPTLTFE-------EHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp HHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 3457788999999999999999888633333211 1224455555443 2589876544455566655543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 93 ~~Gadavlv~~P~y~~~s 110 (294)
T 2ehh_A 93 EVGADGALVVVPYYNKPT 110 (294)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 2 999999999887774
No 463
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=92.36 E-value=0.48 Score=42.82 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~e-------Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 32 FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSE-------EKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKAT 104 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999888633333211 1223455555443 2589876544445555555543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 105 ~~Gadavlv~~P~y~~~s 122 (301)
T 1xky_A 105 EVGVDAVMLVAPYYNKPS 122 (301)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEEcCCCCCCCC
Confidence 2 999999999887774
No 464
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.36 E-value=0.42 Score=43.04 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+-|-|.....++-. -..+.++.+.+.+ .++|||+.-|-.|.+++.++.+.
T Consensus 22 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 22 LEALKAHVNFLLENNAQAIIVNGTTAESPTLTTD-------EKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAK 94 (292)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccccccCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHH
Confidence 3467788999999999999999888633332211 1123455444443 35899876555666777666532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
||+||+-...|..|.
T Consensus 95 ~~Gadavlv~~P~y~~~~ 112 (292)
T 3daq_A 95 ALGADAIMLITPYYNKTN 112 (292)
T ss_dssp HHTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECCCCCCCCC
Confidence 999999988877664
No 465
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=92.35 E-value=1.3 Score=39.52 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCccc---CChHHHHHHHHHHhccccceeEEEEeccCCCCCcHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILM---TKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYD 132 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll---~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~ 132 (311)
+++...+-|+.+.+.|+|.|||..-+-- -|+... +..+.+.-+++++++ .++|+||-.+-
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTR-------Pga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~--------- 90 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTR-------PGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFR--------- 90 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCS-------TTCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSC---------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCC-------CCCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCC---------
Confidence 4555555566666779999999832221 233333 334566777778775 58999997653
Q ss_pred HHHHHHHHHHHcCCCEEE
Q psy2386 133 FVRDFVGTVSSAGCRTFI 150 (311)
Q Consensus 133 ~~~e~~~~l~~~G~~~it 150 (311)
.+.++...++|++.|-
T Consensus 91 --~~Va~~al~aGa~iIN 106 (270)
T 4hb7_A 91 --SEVAEACLKLGVDMIN 106 (270)
T ss_dssp --HHHHHHHHHHTCCEEE
T ss_pred --HHHHHHHHHhccceec
Confidence 3566667777777663
No 466
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=92.31 E-value=0.97 Score=42.40 Aligned_cols=106 Identities=24% Similarity=0.220 Sum_probs=0.0
Q ss_pred cCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecC-ccccccCCCCcCCCCC
Q psy2386 92 GAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHAR-NAFLKKLNPKQNRKIP 170 (311)
Q Consensus 92 G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~R-t~~~~G~~g~~~~~~~ 170 (311)
||..+++.+++.++-+ +++||.+|.-. ..+.+++...++.+.+.|..-|++--| +..|..+...
T Consensus 232 gs~~~~n~~LL~~~a~-----~gkPVilk~G~----~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~------ 296 (385)
T 3nvt_A 232 GARNMQNFELLKAAGR-----VDKPILLKRGL----SATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRN------ 296 (385)
T ss_dssp CGGGTTCHHHHHHHHT-----SSSCEEEECCT----TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSS------
T ss_pred CcccccCHHHHHHHHc-----cCCcEEEecCC----CCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCcc------
Q ss_pred cCcHHHHHHHHHhCCCCeEEEe----cCCCCH--HHHHHHHhh-cCEEEE
Q psy2386 171 ILKYNFVYNLKKDFPELEIIIN----GGIKTK--KEIDLHLNY-IDGVML 213 (311)
Q Consensus 171 ~~~~~~i~~i~~~~~~ipvi~n----GgI~s~--~da~~~l~~-adgVmi 213 (311)
.+|+..+..+++.+ ++||+.. +|-+.. .-+...... |||+||
T Consensus 297 ~ldl~~i~~lk~~~-~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~i 345 (385)
T 3nvt_A 297 TLDISAVPILKKET-HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMA 345 (385)
T ss_dssp BCCTTHHHHHHHHB-SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred ccCHHHHHHHHHhc-CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEE
No 467
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=92.31 E-value=0.55 Score=42.27 Aligned_cols=84 Identities=8% Similarity=0.064 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+. ++|||+.-|=.|.+++.++.+
T Consensus 23 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 23 IDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSR-------ERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHH
Confidence 4567888999999999999999988633333211 12245555565542 489875544455566655543
Q ss_pred h--cCEEEEehhhhhC-C
Q psy2386 207 Y--IDGVMLGREAYKN-P 221 (311)
Q Consensus 207 ~--adgVmigRa~l~~-P 221 (311)
. ||+||+-...|.. |
T Consensus 96 ~~Gadavlv~~P~y~~~~ 113 (294)
T 3b4u_A 96 NAGARNILLAPPSYFKNV 113 (294)
T ss_dssp HTTCSEEEECCCCSSCSC
T ss_pred hcCCCEEEEcCCcCCCCC
Confidence 2 9999999888877 5
No 468
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=92.30 E-value=0.45 Score=42.78 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+.
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 21 RASLKKLIDYHVASGTSAIVSVGTTGESATLNHD-------EHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccchhhCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHH
Confidence 4567788999999999999999988633333211 1224455555443 25898765444555666555532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
+|+||+-...|..|.
T Consensus 94 ~~Gadavlv~~P~y~~~s 111 (292)
T 2ojp_A 94 DSGIVGCLTVTPYYNRPS 111 (292)
T ss_dssp TSSCSEEEEECCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 999999999887774
No 469
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.27 E-value=0.84 Score=41.97 Aligned_cols=108 Identities=14% Similarity=0.170 Sum_probs=68.9
Q ss_pred CCCeEEEecC-------CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhcccccee
Q psy2386 45 EHPIAFQVGD-------NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDI 117 (311)
Q Consensus 45 ~~p~~~Ql~g-------~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pv 117 (311)
+.|+.+-|.. .+.+++.+.|+.++++|+|.|++..|-..+..... + +..-.++++.+++.+++||
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~--~------~~~~~~~~~~ik~~~~iPV 280 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNV--Y------PGYQVPFAELIRREADIPT 280 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCC--C------TTTTHHHHHHHHHHTTCCE
T ss_pred CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCC--C------ccccHHHHHHHHHHcCCcE
Confidence 6789888874 45788999999999999999999866432210000 1 1112355677777788998
Q ss_pred EEEEeccCCCCCcHHHHHHHHHHHHHcC-CCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC
Q psy2386 118 TVKHRIGIDDINSYDFVRDFVGTVSSAG-CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF 184 (311)
Q Consensus 118 svKiR~g~~~~~~~~~~~e~~~~l~~~G-~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~ 184 (311)
.+-=+ ..+ .+-+..+.+.| +|.|.+ ||-.. .|-+++.++++.+
T Consensus 281 i~~Gg--I~s-------~e~a~~~L~~G~aD~V~i-GR~~l--------------anPdl~~ki~~~l 324 (340)
T 3gr7_A 281 GAVGL--ITS-------GWQAEEILQNGRADLVFL-GRELL--------------RNPYWPYAAAREL 324 (340)
T ss_dssp EEESS--CCC-------HHHHHHHHHTTSCSEEEE-CHHHH--------------HCTTHHHHHHHHT
T ss_pred EeeCC--CCC-------HHHHHHHHHCCCeeEEEe-cHHHH--------------hCchHHHHHHHHC
Confidence 76322 222 24455666666 998877 56421 2335677777765
No 470
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=92.27 E-value=4.6 Score=37.28 Aligned_cols=131 Identities=10% Similarity=0.193 Sum_probs=78.9
Q ss_pred eEEEecCCC---HHHHHHHHHHHHHcCCC-----EEEeccCCCccccccCccc---Cccc-------CChHHHHHHHHHH
Q psy2386 48 IAFQVGDNE---PKKLAKSAKIIQKWGYD-----EINLNCGCPSNRVQNGFFG---AILM-------TKPLLVSDCIKAM 109 (311)
Q Consensus 48 ~~~Ql~g~~---~~~~~~aa~~~~~~g~d-----~IdiN~gCP~~~v~~~~~G---~~Ll-------~~~~~~~~iv~~v 109 (311)
+|.=++.|- .+...+..+.+.++|+| .|-+..-.|-.-......+ -.+. -..+...++. ..
T Consensus 8 IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~-~~ 86 (350)
T 3g8r_A 8 FIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLV-AE 86 (350)
T ss_dssp EEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHH-HH
T ss_pred EEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHH-HH
Confidence 445555443 33333333344566877 8888765543322111111 1111 1233444444 44
Q ss_pred hccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeE
Q psy2386 110 RDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEI 189 (311)
Q Consensus 110 ~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipv 189 (311)
.+..++++..- -||. +-+..+++.|++.+.|-+|.- -|+.+++++.+. +.||
T Consensus 87 ~~~~Gi~~~st---~fD~--------~svd~l~~~~v~~~KI~S~~~---------------~N~pLL~~va~~--gKPv 138 (350)
T 3g8r_A 87 MKANGFKAICT---PFDE--------ESVDLIEAHGIEIIKIASCSF---------------TDWPLLERIARS--DKPV 138 (350)
T ss_dssp HHHTTCEEEEE---ECSH--------HHHHHHHHTTCCEEEECSSST---------------TCHHHHHHHHTS--CSCE
T ss_pred HHHcCCcEEec---cCCH--------HHHHHHHHcCCCEEEECcccc---------------cCHHHHHHHHhh--CCcE
Confidence 44468887542 2332 335566889999999998863 489999999874 6899
Q ss_pred EEecCCCCHHHHHHHHhh
Q psy2386 190 IINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 190 i~nGgI~s~~da~~~l~~ 207 (311)
|.+=|..|.+++....+.
T Consensus 139 iLstGmstl~Ei~~Ave~ 156 (350)
T 3g8r_A 139 VASTAGARREDIDKVVSF 156 (350)
T ss_dssp EEECTTCCHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHH
Confidence 999999999999887653
No 471
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=92.22 E-value=4.7 Score=34.82 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=77.0
Q ss_pred CCCCCeEEEecCCC-HHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 43 AEEHPIAFQVGDNE-PKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~-~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
|...++.|-|||-. +++. +| .++|+|.|=+.+--+++.. =+++.+.+|++.. ..|+.+ +
T Consensus 16 p~~~~M~VKICGit~~ed~-~a----~~~gaD~iGfIf~~~SpR~----------V~~~~A~~i~~~~----~~~~~~-v 75 (228)
T 4aaj_A 16 PRGSHMFVKICGIKSLEEL-EI----VEKHADATGVVVNSNSKRR----------IPLEKAREIIENS----AIPVFL-V 75 (228)
T ss_dssp ----CCEEEECCCCSHHHH-HH----HHTTCSEEEEECSSSSTTB----------CCHHHHHHHHHHC----SSCEEE-E
T ss_pred CCCCceEEEECCCCcHHHH-HH----HHcCCCEEEEEecCCCCCC----------CCHHHHHHHHHhh----CCCCEE-E
Confidence 44567889999964 5553 33 2579999999985444321 2578888887652 333321 1
Q ss_pred eccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEE---ecCCCC-
Q psy2386 122 RIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIII---NGGIKT- 197 (311)
Q Consensus 122 R~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~---nGgI~s- 197 (311)
....+ ..+++..+++.+.|.|.+||.. +-+++.++++.+ ++|||= ...+..
T Consensus 76 ~v~v~-------~~ei~~~i~~~~ld~vQLHG~E-----------------~~~~~~~l~~~~-~~~viKa~~v~~~~~~ 130 (228)
T 4aaj_A 76 STMVG-------FSEWAMAIERTGAQYIQVHSNA-----------------LPQTIDTLKKEF-GVFVMKAFRVPTISKN 130 (228)
T ss_dssp ECCCC-------HHHHHHHHHHHTCSEEEECSCC-----------------CHHHHHHHHHHH-CCEEEEEEECCSSCSC
T ss_pred eccCc-------hHHHHHHHHhccchheeccccc-----------------CHHHHHHHhhcc-CceEEEEEEecccccc
Confidence 22211 2356677889999999999874 346788888876 677753 333332
Q ss_pred -HHHHHHHHh----h-cCEEEEe
Q psy2386 198 -KKEIDLHLN----Y-IDGVMLG 214 (311)
Q Consensus 198 -~~da~~~l~----~-adgVmig 214 (311)
.+++...+. . ||++.+-
T Consensus 131 ~~~~~~~~~~~~~~~~~d~~LlD 153 (228)
T 4aaj_A 131 PEEDANRLLSEISRYNADMVLLD 153 (228)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEE
T ss_pred hhhhHHHHHHHHhccCCCEEccC
Confidence 344544443 2 8988873
No 472
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.21 E-value=1 Score=38.98 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=65.6
Q ss_pred HHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHH
Q psy2386 101 LVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNL 180 (311)
Q Consensus 101 ~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i 180 (311)
...++++.+++. |+..=+|.. +. ++..++++.+.+.|++.|.+.-++. ...+.++++
T Consensus 15 ~~~~~~~~l~~~---~ii~V~r~~-~~----~~~~~~~~al~~gGv~~iel~~k~~---------------~~~~~i~~l 71 (225)
T 1mxs_A 15 KAARIDAICEKA---RILPVITIA-RE----EDILPLADALAAGGIRTLEVTLRSQ---------------HGLKAIQVL 71 (225)
T ss_dssp HHHHHHHHHHHH---SEEEEECCS-CG----GGHHHHHHHHHHTTCCEEEEESSST---------------HHHHHHHHH
T ss_pred hHHHHHHHHHHC---CEEEEEeCC-CH----HHHHHHHHHHHHCCCCEEEEecCCc---------------cHHHHHHHH
Confidence 355566666553 566666752 21 2468999999999999999875542 235678889
Q ss_pred HHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEEe
Q psy2386 181 KKDFPELEIIINGGIKTKKEIDLHLNY-IDGVMLG 214 (311)
Q Consensus 181 ~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmig 214 (311)
++.+|++. ++.|-+.+.+++...++. ||+|.+|
T Consensus 72 ~~~~~~~~-igagtvl~~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 72 REQRPELC-VGAGTVLDRSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp HHHCTTSE-EEEECCCSHHHHHHHHHHTCSSEECS
T ss_pred HHhCcccE-EeeCeEeeHHHHHHHHHCCCCEEEeC
Confidence 98886654 566679999999999987 9999987
No 473
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=92.21 E-value=0.54 Score=42.28 Aligned_cols=85 Identities=13% Similarity=-0.039 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHH-cCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh--
Q psy2386 131 YDFVRDFVGTVSS-AGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN-- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~-~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~-- 206 (311)
++.+..+++.+.+ .|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 23 ~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 23 EKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTE-------EKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHH-------HHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHH-------HHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 4567788999999 999999999988633333211 1224455555443 2599886545555566655543
Q ss_pred -h--cCEEEEehhhhhCCc
Q psy2386 207 -Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 -~--adgVmigRa~l~~P~ 222 (311)
. +|+||+-...|..|.
T Consensus 96 ~~~Gadavlv~~P~y~~~~ 114 (293)
T 1f6k_A 96 TELGYDCLSAVTPFYYKFS 114 (293)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 2 999999999887774
No 474
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=92.21 E-value=2.7 Score=35.69 Aligned_cols=122 Identities=12% Similarity=0.164 Sum_probs=78.4
Q ss_pred EEEecCC-CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCC
Q psy2386 49 AFQVGDN-EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD 127 (311)
Q Consensus 49 ~~Ql~g~-~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~ 127 (311)
.+.|+|- ++++. +.+.++|+|.|=+.+--+++.. =+++.+.+|++++...+ .+|.|= . +
T Consensus 3 ~vKICGit~~eda----~~a~~~GaD~iGfif~~~SpR~----------V~~~~a~~i~~~~~~~~-~~VgVf--v--n- 62 (205)
T 1nsj_A 3 RVKICGITNLEDA----LFSVESGADAVGFVFYPKSKRY----------ISPEDARRISVELPPFV-FRVGVF--V--N- 62 (205)
T ss_dssp EEEECCCCSHHHH----HHHHHHTCSEEEEECCTTCTTB----------CCHHHHHHHHHHSCSSS-EEEEEE--S--S-
T ss_pred cEEECCCCcHHHH----HHHHHcCCCEEEEEecCCCCCc----------CCHHHHHHHHHhCCCCC-CEEEEE--e--C-
Confidence 4788885 45554 3444789999999974333321 25788888887765421 223331 1 1
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh
Q psy2386 128 INSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY 207 (311)
Q Consensus 128 ~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~ 207 (311)
.+ ..++.+.+.+.+.|.|.+||.. +.+++.++++ .+|||-.=.|.+.+|+.++...
T Consensus 63 -~~---~~~i~~~~~~~~ld~vQLHG~e-----------------~~~~~~~l~~---~~~vika~~v~~~~~l~~~~~~ 118 (205)
T 1nsj_A 63 -EE---PEKILDVASYVQLNAVQLHGEE-----------------PIELCRKIAE---RILVIKAVGVSNERDMERALNY 118 (205)
T ss_dssp -CC---HHHHHHHHHHHTCSEEEECSCC-----------------CHHHHHHHHT---TSEEEEEEEESSHHHHHHHGGG
T ss_pred -CC---HHHHHHHHHhhCCCEEEECCCC-----------------CHHHHHHHhc---CCCEEEEEEcCCHHHHHHHHHc
Confidence 11 3466777788999999999863 3366777763 3677755566777777665545
Q ss_pred -cCEEEEe
Q psy2386 208 -IDGVMLG 214 (311)
Q Consensus 208 -adgVmig 214 (311)
+|++.+-
T Consensus 119 ~~d~~LlD 126 (205)
T 1nsj_A 119 REFPILLD 126 (205)
T ss_dssp TTSCEEEE
T ss_pred CCCEEEEC
Confidence 8888874
No 475
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.17 E-value=0.51 Score=42.54 Aligned_cols=85 Identities=14% Similarity=0.135 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+.
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 27 YEQLRDLIDWHIENGTDGIVAVGTTGESATLSVE-------EHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAE 99 (297)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcccCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHH
Confidence 4567888999999999999999988633332211 1123455554443 35898876555566666665532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
||+||+-...|..|.
T Consensus 100 ~~Gadavlv~~P~y~~~~ 117 (297)
T 3flu_A 100 KAGADYTLSVVPYYNKPS 117 (297)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECCCCCCCCC
Confidence 999999998887774
No 476
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=92.15 E-value=0.7 Score=41.98 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--- 207 (311)
++.+..+++.+.+.|++.|.+-|-|.....++.. -..+.++.+.+.+.++|||+.=|=.|.+++.++.+.
T Consensus 28 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~-------Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~ 100 (313)
T 3dz1_A 28 DVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAA-------EAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMD 100 (313)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHH-------HHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHH-------HHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHH
Confidence 4567888999999999999999888633333211 123455555555546999876555566666665532
Q ss_pred --cCEEEEehhh
Q psy2386 208 --IDGVMLGREA 217 (311)
Q Consensus 208 --adgVmigRa~ 217 (311)
||+||+-...
T Consensus 101 ~Gadavlv~~P~ 112 (313)
T 3dz1_A 101 AGAAGVMIAPPP 112 (313)
T ss_dssp HTCSEEEECCCT
T ss_pred cCCCEEEECCCC
Confidence 9999998765
No 477
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=92.14 E-value=2.7 Score=37.68 Aligned_cols=115 Identities=10% Similarity=0.178 Sum_probs=71.4
Q ss_pred ccCChHHHHHHHHHHhccccceeEEEEe-ccC-CCC-------CcHHHHHHHHHHHHHcCCCEEEEecCccccccCCCCc
Q psy2386 95 LMTKPLLVSDCIKAMRDSVEIDITVKHR-IGI-DDI-------NSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQ 165 (311)
Q Consensus 95 Ll~~~~~~~~iv~~v~~~~~~pvsvKiR-~g~-~~~-------~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~ 165 (311)
+.+|-+...++++.+.+. ++.|-.-+- +|- .+. ..+-+..+..+.+++.|+|.|.+.=.|. -+-|.|
T Consensus 110 ~eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~-HG~Y~~-- 185 (286)
T 1gvf_A 110 FAENVKLVKSVVDFCHSQ-DCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTA-HGLYSK-- 185 (286)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCC-SSCCSS--
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCcc-ccCcCC--
Confidence 445677778888777653 555544332 121 110 0111244555666789999998754442 111222
Q ss_pred CCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCH-HHHHHHHhh-cCEEEEehhh
Q psy2386 166 NRKIPILKYNFVYNLKKDFPELEIIINGGIKTK-KEIDLHLNY-IDGVMLGREA 217 (311)
Q Consensus 166 ~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~-~da~~~l~~-adgVmigRa~ 217 (311)
.+..|++.++++++.+ ++|++.-||=.++ +++++.+.. +--|=|++.+
T Consensus 186 ---~p~Ld~~~L~~I~~~~-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl 235 (286)
T 1gvf_A 186 ---TPKIDFQRLAEIREVV-DVPLVLHGASDVPDEFVRRTIELGVTKVNVATEL 235 (286)
T ss_dssp ---CCCCCHHHHHHHHHHC-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHH
T ss_pred ---CCccCHHHHHHHHHhc-CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHH
Confidence 2458999999999998 7999999866654 456777765 7777777766
No 478
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=92.14 E-value=0.47 Score=43.59 Aligned_cols=85 Identities=8% Similarity=0.056 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 54 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~e-------Er~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~ 126 (332)
T 2r8w_A 54 IEAFSALIARLDAAEVDSVGILGSTGIYMYLTRE-------ERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAE 126 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999988633333211 1224455555443 2599875544445555555443
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 127 ~~Gadavlv~~P~Y~~~s 144 (332)
T 2r8w_A 127 AAGADALLLAPVSYTPLT 144 (332)
T ss_dssp HHTCSEEEECCCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 2 999999988877664
No 479
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.13 E-value=0.46 Score=43.26 Aligned_cols=85 Identities=13% Similarity=0.196 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ .++|||+.-|=.|.+++.++.+.
T Consensus 43 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~-------Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~ 115 (314)
T 3qze_A 43 WDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVE-------EHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAK 115 (314)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHH
Confidence 4567888899999999999999888633333211 1123444444443 25898876555566666665532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
||+||+-...|..|.
T Consensus 116 ~~Gadavlv~~P~y~~~s 133 (314)
T 3qze_A 116 SGGADACLLVTPYYNKPT 133 (314)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEEcCCCCCCCC
Confidence 999999999888774
No 480
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=92.12 E-value=0.68 Score=40.37 Aligned_cols=141 Identities=11% Similarity=0.135 Sum_probs=88.6
Q ss_pred HHHHHHHHHHcCCCEEEeccC--------------------------------------------CCcccc---ccCccc
Q psy2386 60 LAKSAKIIQKWGYDEINLNCG--------------------------------------------CPSNRV---QNGFFG 92 (311)
Q Consensus 60 ~~~aa~~~~~~g~d~IdiN~g--------------------------------------------CP~~~v---~~~~~G 92 (311)
..+||.+++++|+|+|-+|.- |-+|-. .+...|
T Consensus 27 pv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ia~~~kP~~vtLVPE~r~e~TTegG 106 (243)
T 1m5w_A 27 PVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGG 106 (243)
T ss_dssp HHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSEEEEEECSSHHHHHHHHHHCCSEEEECCCCSSCSSCCSC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHhcCCCEEeccCCCHHHHHHHHHcCCCEEEECCCCCCCcCCCcc
Confidence 567888899999999998732 323322 244556
Q ss_pred CcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCcccccc-CCCCcCCCCCc
Q psy2386 93 AILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKK-LNPKQNRKIPI 171 (311)
Q Consensus 93 ~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G-~~g~~~~~~~~ 171 (311)
--+..+.+.+.++++.+++. ++.||+-+-. + .+-++...+.|++.|-+|... |.. +... .. .
T Consensus 107 ldv~~~~~~l~~~i~~L~~~-GIrVSLFIDp-----d-----~~qi~aA~~~GA~~IELhTG~--Ya~a~~~~-~~---~ 169 (243)
T 1m5w_A 107 LDVAGQRDKMRDACKRLADA-GIQVSLFIDA-----D-----EEQIKAAAEVGAPFIEIHTGC--YADAKTDA-EQ---A 169 (243)
T ss_dssp CCSGGGHHHHHHHHHHHHHT-TCEEEEEECS-----C-----HHHHHHHHHTTCSEEEEECHH--HHHCCSHH-HH---H
T ss_pred hhHHhhHHHHHHHHHHHHHC-CCEEEEEeCC-----C-----HHHHHHHHHhCcCEEEEechh--hhcCCCch-hH---H
Confidence 67788999999999999885 8999886643 1 355677799999999999543 211 1100 00 0
Q ss_pred CcHHH---HHHHHHhCCCCeEEEecCCCCHHHHHHHH--hhcCEEEEehhhhh
Q psy2386 172 LKYNF---VYNLKKDFPELEIIINGGIKTKKEIDLHL--NYIDGVMLGREAYK 219 (311)
Q Consensus 172 ~~~~~---i~~i~~~~~~ipvi~nGgI~s~~da~~~l--~~adgVmigRa~l~ 219 (311)
.-++. ..+.+... .+-|-+.-|++ ++.+..+. ....-|-||.+++.
T Consensus 170 ~el~~i~~aa~~A~~l-GL~VnAGHgL~-y~Nv~~ia~ip~i~ElnIGHaiia 220 (243)
T 1m5w_A 170 QELARIAKAATFAASL-GLKVNAGHGLT-YHNVKAIAAIPEMHELNIGHAIIG 220 (243)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEEEESSCC-TTTHHHHHTCTTEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCEEecCCCCC-HHHHHHHhhCCCCeEEccCHHHHH
Confidence 01121 22223344 57776666654 33343333 33788999988855
No 481
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=92.07 E-value=0.65 Score=45.83 Aligned_cols=112 Identities=12% Similarity=0.072 Sum_probs=74.0
Q ss_pred CcEEEecceecc----cccCCchhccccCCCCCCeEEEecCC------CHHHHHHHHHHHHHcCCCEEEeccCCCccccc
Q psy2386 18 YSWLYTEMFTTQ----AILGNKKHCLDFNAEEHPIAFQVGDN------EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQ 87 (311)
Q Consensus 18 ~~l~~temv~a~----~l~~~~~~~l~~~~~~~p~~~Ql~g~------~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~ 87 (311)
.|+..-|-++.- +.+ ..++..-.+.|+.+++.-. +-..+.+++..+...|++.|=+||++.
T Consensus 140 vD~l~~ET~~~~~Ea~aa~----~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~avG~NC~~g----- 210 (566)
T 1q7z_A 140 VDGIIFETFSDILELKAAV----LAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALGINCSLG----- 210 (566)
T ss_dssp CSEEEEEEECCHHHHHHHH----HHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEEEEESSSC-----
T ss_pred CCEEEEeccCCHHHHHHHH----HHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEEEEeCCCC-----
Confidence 588888877532 221 1111111267888887621 123455666677778999999998752
Q ss_pred cCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCC--------CCcHHHHHHHHHHHHHcCCCEE
Q psy2386 88 NGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDD--------INSYDFVRDFVGTVSSAGCRTF 149 (311)
Q Consensus 88 ~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~--------~~~~~~~~e~~~~l~~~G~~~i 149 (311)
|+.+..+++.+++..+.|++|.=..|... +.+.+++.++++.+.+.|+..|
T Consensus 211 -----------p~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G~~ii 269 (566)
T 1q7z_A 211 -----------PEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGVNIF 269 (566)
T ss_dssp -----------HHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTTCSEE
T ss_pred -----------HHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcCCcEE
Confidence 57788889999888899999986655431 1223467788888889997766
No 482
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=92.07 E-value=2.4 Score=40.61 Aligned_cols=140 Identities=11% Similarity=0.082 Sum_probs=79.6
Q ss_pred CCCCeEEEec-CCCHHHHHHHHHHHH-HcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEE
Q psy2386 44 EEHPIAFQVG-DNEPKKLAKSAKIIQ-KWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKH 121 (311)
Q Consensus 44 ~~~p~~~Ql~-g~~~~~~~~aa~~~~-~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKi 121 (311)
.+.++++=+- +.-|+.++.+|+.+. ++|+|.|.+|. +|+. +.++...+..+.-|+|=+
T Consensus 76 ~g~~VflDlK~~DIpnT~~~~a~~~~~~lg~d~vTvh~-----------~~G~---------~~l~~~~~~~~~~v~vL~ 135 (453)
T 3qw4_B 76 AGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP-----------YMGS---------DSLQPFMRYPDKAVFVLC 135 (453)
T ss_dssp TTSCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECS-----------TTCH---------HHHHHHHTCTTSEEEEEE
T ss_pred CCCeEEEEeecCChHHHHHHHHHHHHHHcCCCEEEEcc-----------cCCH---------HHHHHHHHhhCCcEEEEE
Confidence 4678887775 444777777777655 59999999992 3221 233333333343455544
Q ss_pred eccCCC----CC------c-HHHHHHHHH-HHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeE
Q psy2386 122 RIGIDD----IN------S-YDFVRDFVG-TVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEI 189 (311)
Q Consensus 122 R~g~~~----~~------~-~~~~~e~~~-~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipv 189 (311)
++.... .+ + ++...+.++ .+.+.|.+.+.+.+.. -+.++.+++.+++.++
T Consensus 136 ~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~gat~------------------~~e~~~ir~~~~~~~~ 197 (453)
T 3qw4_B 136 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATD------------------PVALARVRARAPTLWF 197 (453)
T ss_dssp ECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEECTTC------------------HHHHHHHHHHCSSCCE
T ss_pred eCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEECCCC------------------HHHHHHHHHhCCCCeE
Confidence 443221 11 1 123333343 3335788888664321 1346778887766666
Q ss_pred EEec-CC--CCHHHHHHHHhhcCE------EEEehhhhhCCcc
Q psy2386 190 IING-GI--KTKKEIDLHLNYIDG------VMLGREAYKNPFL 223 (311)
Q Consensus 190 i~nG-gI--~s~~da~~~l~~adg------VmigRa~l~~P~i 223 (311)
+.-| |. .|++++.+.- +|. +.+||+.+.-+..
T Consensus 198 l~PGig~qg~tp~~a~~~g--~d~~~~~~livvgR~I~~A~dp 238 (453)
T 3qw4_B 198 LVPGIGAQGGSLKASLDAG--LRADGSGMLINVSRGLARAADP 238 (453)
T ss_dssp EECCSSTTCCCHHHHHHHH--CCTTSCCEEEEESHHHHSCSCH
T ss_pred EECCcCCCCCCHHHHHHhc--CCcccCCceEecChhhccCCCH
Confidence 5544 22 2666665432 555 8999999876654
No 483
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=92.05 E-value=0.61 Score=44.39 Aligned_cols=101 Identities=9% Similarity=0.111 Sum_probs=64.5
Q ss_pred CChHHHHHHHHHHhcc---c--cceeEEEEec------c-CC---CCCcHHHHHHHHHH-HHHcCCCEEEEecCcccccc
Q psy2386 97 TKPLLVSDCIKAMRDS---V--EIDITVKHRI------G-ID---DINSYDFVRDFVGT-VSSAGCRTFIVHARNAFLKK 160 (311)
Q Consensus 97 ~~~~~~~~iv~~v~~~---~--~~pvsvKiR~------g-~~---~~~~~~~~~e~~~~-l~~~G~~~itvh~Rt~~~~G 160 (311)
.+.+.+..++++++++ + ++.+.+-.-. | ++ ..-+.++.+++++. +++.++..| .+.
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~I--------EdP 287 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISI--------EDG 287 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEE--------ECC
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceE--------eCC
Confidence 4556667778999998 5 4555554410 0 00 01123457788887 788876555 111
Q ss_pred CCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC---CCCHHHHHHHHhh--cCEEEEe
Q psy2386 161 LNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG---IKTKKEIDLHLNY--IDGVMLG 214 (311)
Q Consensus 161 ~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg---I~s~~da~~~l~~--adgVmig 214 (311)
.++-||+..+++++.+ ..||-..|| ++++.++.+.++. ||.|++=
T Consensus 288 --------l~~dD~eg~~~L~~~~-~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 288 --------LSENDWAGWKLLTERL-ENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp --------SCTTCHHHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred --------CCcccHHHHHHHHHhc-CCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 1235899999999887 556644565 3499999999875 8877764
No 484
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=92.04 E-value=0.67 Score=43.16 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=62.7
Q ss_pred cceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc--------cccCC-----------------CCcC--
Q psy2386 114 EIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF--------LKKLN-----------------PKQN-- 166 (311)
Q Consensus 114 ~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~--------~~G~~-----------------g~~~-- 166 (311)
+.|+.+-+-...+ .+...+.+++++++|++.|.+|--... .+++. |..-
T Consensus 132 ~~~~~~QLy~~~d----~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~ 207 (368)
T 2nli_A 132 GGPRWFQIYMAKD----DQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNN 207 (368)
T ss_dssp TCCEEEEECCBSS----HHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC----
T ss_pred CCCEEEEEeccCC----HHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHh
Confidence 4677776533222 124678899999999999988743210 01110 1110
Q ss_pred -C--CCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 167 -R--KIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 167 -~--~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
. ..+...|+.|+++++.. ++||+.-| |.++++++.+.+. +|+|.+
T Consensus 208 ~~~~~d~~~~~~~i~~lr~~~-~~PvivK~-v~~~e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 208 IYGASKQKISPRDIEEIAGHS-GLPVFVKG-IQHPEDADMAIKRGASGIWV 256 (368)
T ss_dssp -CTTBCSBCCHHHHHHHHHHS-SSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred hhhccCchhhHHHHHHHHHHc-CCCEEEEc-CCCHHHHHHHHHcCCCEEEE
Confidence 0 13446799999999998 79998874 7899999999877 999999
No 485
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=92.02 E-value=0.38 Score=43.45 Aligned_cols=85 Identities=13% Similarity=0.075 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|+....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 20 ~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 20 EKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEE-------EHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHH-------HHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccchhhCCHH-------HHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHH
Confidence 3457788999999999999999888633333211 1224455555443 2589875544445555555543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 93 ~~Gadavlv~~P~y~~~s 110 (297)
T 2rfg_A 93 QAGADAVLCVAGYYNRPS 110 (297)
T ss_dssp HHTCSEEEECCCTTTCCC
T ss_pred hcCCCEEEEcCCCCCCCC
Confidence 2 999999998887774
No 486
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.97 E-value=0.52 Score=42.34 Aligned_cols=85 Identities=13% Similarity=0.158 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+.|-|+....++-. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+.
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 21 WKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSME-------EHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccccccCCHH-------HHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 4567888999999999999999888633332211 1123455554443 25898876555566666665532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
+|+||+-...|..|.
T Consensus 94 ~~Gadavlv~~P~y~~~~ 111 (291)
T 3tak_A 94 DLGADAALLVTPYYNKPT 111 (291)
T ss_dssp HHTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEEcCCCCCCCC
Confidence 999999999888774
No 487
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=91.97 E-value=1.3 Score=42.54 Aligned_cols=125 Identities=10% Similarity=0.127 Sum_probs=79.8
Q ss_pred CHHHHHHHHH-HHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccc-cceeEEEEeccCCCCCcHHH
Q psy2386 56 EPKKLAKSAK-IIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSV-EIDITVKHRIGIDDINSYDF 133 (311)
Q Consensus 56 ~~~~~~~aa~-~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~-~~pvsvKiR~g~~~~~~~~~ 133 (311)
+|++.++.++ ...+.||+.+-|..|.+ +++.-.+.++++++++ ++++.|-..-+|+. ++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~wt~----~~ 262 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAWSL----DE 262 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCH----HH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCccCH----HH
Confidence 4555555444 45667999999876532 2333456677888776 45566655555643 35
Q ss_pred HHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh--cCEE
Q psy2386 134 VRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY--IDGV 211 (311)
Q Consensus 134 ~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~--adgV 211 (311)
.+++++.+++. +.++- --.++++ ...+.+..+++++.. ++||.+.-.+.+..++.++++. +|.+
T Consensus 263 Ai~~~~~le~~-l~wiE---------eP~~~~d---~~~~~e~~a~lr~~~-~iPIa~gE~~~~~~~~~~~i~~~avdi~ 328 (464)
T 4g8t_A 263 AVKIGKQLKGV-LAYAE---------DPCGAEQ---GYSGREIMAEFRRAT-GLPTATNMIATDWRQMGHTISLQSVDIP 328 (464)
T ss_dssp HHHHHHHTTTT-CSCEE---------SCBCCBT---TBCHHHHHHHHHHHH-CCCEEESSSSCSHHHHHHHHHHTCCSEE
T ss_pred HHHHHHHhhhc-cceee---------cCcCccc---ccchHHHHHhhhccC-CCCccccccccchhhHHHHHHhhCCCEE
Confidence 67888888664 55441 0000000 001347788899887 7999999999999999999875 7755
Q ss_pred EE
Q psy2386 212 ML 213 (311)
Q Consensus 212 mi 213 (311)
+.
T Consensus 329 ~~ 330 (464)
T 4g8t_A 329 LA 330 (464)
T ss_dssp BC
T ss_pred ec
Confidence 43
No 488
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.95 E-value=1.1 Score=40.80 Aligned_cols=87 Identities=10% Similarity=0.065 Sum_probs=58.7
Q ss_pred HHHHHHHcCCCEEEec-cCCCccccccCcccCcccCChHHHHHHHHHHhcccc--ceeEEEEeccCCCCCcHHHHHHHHH
Q psy2386 63 SAKIIQKWGYDEINLN-CGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVE--IDITVKHRIGIDDINSYDFVRDFVG 139 (311)
Q Consensus 63 aa~~~~~~g~d~IdiN-~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~--~pvsvKiR~g~~~~~~~~~~~e~~~ 139 (311)
.|++++++|||.|=+- .+.-. +. -|+-...+-..+.+...++.|.+.++ +||++-+-.|+-+ .+...+.++
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~--s~-~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~---~~~v~~~v~ 110 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTA--SR-LGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGG---PIMVARTVE 110 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH--HH-HCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSS---HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeccHHHHH--Hh-cCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCC---HHHHHHHHH
Confidence 5678889999998773 11110 00 11112223345566667777877654 9999999999743 235678899
Q ss_pred HHHHcCCCEEEEecCc
Q psy2386 140 TVSSAGCRTFIVHARN 155 (311)
Q Consensus 140 ~l~~~G~~~itvh~Rt 155 (311)
.++++|+++|.+-+..
T Consensus 111 ~l~~aGaagv~iEDq~ 126 (307)
T 3lye_A 111 HYIRSGVAGAHLEDQI 126 (307)
T ss_dssp HHHHTTCCEEEECCBC
T ss_pred HHHHcCCeEEEEcCCC
Confidence 9999999999998765
No 489
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=91.93 E-value=0.49 Score=42.90 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~e-------Er~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 32 LESYERLVRYQLENGVNALIVLGTTGESPTVNED-------EREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAE 104 (306)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHH-------HHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccchhhCCHH-------HHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHH
Confidence 3457788999999999999999988633333211 1123455555443 2589875544445555555543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 105 ~~Gadavlv~~P~y~~~s 122 (306)
T 1o5k_A 105 KLGANGVLVVTPYYNKPT 122 (306)
T ss_dssp HHTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 2 999999999887774
No 490
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=91.92 E-value=0.51 Score=42.98 Aligned_cols=116 Identities=13% Similarity=0.114 Sum_probs=69.6
Q ss_pred CCCCe-EEEecCCCHH---------------HHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHH
Q psy2386 44 EEHPI-AFQVGDNEPK---------------KLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIK 107 (311)
Q Consensus 44 ~~~p~-~~Ql~g~~~~---------------~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~ 107 (311)
..+|. ++-|.-..|+ ...+-|+...+.|+|.||||+..--| |+ .-..++...++++
T Consensus 44 ~~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP-------~~-~~vs~eee~~vV~ 115 (310)
T 2h9a_B 44 PNPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVALRLVSAHP-------DG-QNRSGAELAEVCK 115 (310)
T ss_dssp CSCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEEEECGGGCT-------TT-TCCCHHHHHHHHH
T ss_pred CCCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEEEeCccCCC-------CC-CCCCHHHHHHHHH
Confidence 45675 7777765553 22233344457899999999763211 21 2345677777999
Q ss_pred HHhccccceeEE-EEeccCCCCCcHHHHHHHHHHHHHcCCC---EE-EEecCccccccCCCCcCCCCCcCcHHHHHHHHH
Q psy2386 108 AMRDSVEIDITV-KHRIGIDDINSYDFVRDFVGTVSSAGCR---TF-IVHARNAFLKKLNPKQNRKIPILKYNFVYNLKK 182 (311)
Q Consensus 108 ~v~~~~~~pvsv-KiR~g~~~~~~~~~~~e~~~~l~~~G~~---~i-tvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~ 182 (311)
.+++.+++|++| -. .+. +.-.+.++...++|++ .| .+.+ .+++.+..+..
T Consensus 116 ~v~~~~~vplsI~DT------~~~-~~~~~V~eaal~aga~~k~iINdvs~------------------~~~~~~~~~aa 170 (310)
T 2h9a_B 116 AVADAIDVPLMIIGC------GVE-EKDAEIFPVIGEALSGRNCLLSSATK------------------DNYKPIVATCM 170 (310)
T ss_dssp HHHHHCSSCEEEECC------SCH-HHHHHHHHHHHHHTTTSCCEEEEECT------------------TTHHHHHHHHH
T ss_pred HHHHhCCceEEEECC------CCC-CCCHHHHHHHHHhCCCCCCEEEECCC------------------CccHHHHHHHH
Confidence 998888999988 33 110 1124677888888886 33 1211 13455555655
Q ss_pred hCCCCeEEEec
Q psy2386 183 DFPELEIIING 193 (311)
Q Consensus 183 ~~~~ipvi~nG 193 (311)
.. +.||++.-
T Consensus 171 ~~-g~~vv~m~ 180 (310)
T 2h9a_B 171 VH-GHSVVASA 180 (310)
T ss_dssp HH-TCEEEEEC
T ss_pred Hh-CCCEEEEC
Confidence 55 67877654
No 491
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=91.89 E-value=0.41 Score=43.17 Aligned_cols=143 Identities=11% Similarity=0.063 Sum_probs=81.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCC----CCCc
Q psy2386 55 NEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGID----DINS 130 (311)
Q Consensus 55 ~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~----~~~~ 130 (311)
.+...+ +.+.++|+|.|.|-.++.-. ..+...+....+..+.+.++++.+++. +.+|.+-+...+. ...+
T Consensus 81 ~~~~~i----~~a~~ag~~~v~i~~~~sd~-~~~~~~~~~~~e~l~~~~~~i~~a~~~-G~~v~~~l~~~~~~~~~~~~~ 154 (298)
T 2cw6_A 81 PNLKGF----EAAVAAGAKEVVIFGAASEL-FTKKNINCSIEESFQRFDAILKAAQSA-NISVRGYVSCALGCPYEGKIS 154 (298)
T ss_dssp CSHHHH----HHHHHTTCSEEEEEEESCHH-HHHHHHSCCHHHHHHHHHHHHHHHHHT-TCEEEEEEETTTCBTTTBSCC
T ss_pred CCHHhH----HHHHHCCCCEEEEEecCCHH-HHHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCCC
Confidence 455544 44556899999985443321 112222333333445666666666664 7777665543221 1123
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEec----CCCCHHHHHHHHh
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIING----GIKTKKEIDLHLN 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nG----gI~s~~da~~~l~ 206 (311)
.+.+.++++.+.+.|++.|.+-.... ... |..-.+.++.+++.+|++|+-.-+ |... ..+...++
T Consensus 155 ~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~-------P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~-An~laA~~ 223 (298)
T 2cw6_A 155 PAKVAEVTKKFYSMGCYEISLGDTIG---VGT-------PGIMKDMLSAVMQEVPLAALAVHCHDTYGQAL-ANTLMALQ 223 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTS---CCC-------HHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCCC---CcC-------HHHHHHHHHHHHHhCCCCeEEEEECCCCchHH-HHHHHHHH
Confidence 46788999999999999998864321 111 112357888898888667775443 2222 22333343
Q ss_pred -hcCEEEEe
Q psy2386 207 -YIDGVMLG 214 (311)
Q Consensus 207 -~adgVmig 214 (311)
+|+.|-..
T Consensus 224 aGa~~vd~t 232 (298)
T 2cw6_A 224 MGVSVVDSS 232 (298)
T ss_dssp TTCCEEEEB
T ss_pred hCCCEEEee
Confidence 37766553
No 492
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.84 E-value=0.53 Score=43.46 Aligned_cols=85 Identities=11% Similarity=0.082 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHh---
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLN--- 206 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~--- 206 (311)
++.+..+++.+.+.|++.|.+.|-|.....++.. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+
T Consensus 51 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~e-------Er~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 51 KPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAE-------ERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp HHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 4567888999999999999999988633333211 1224455555443 2589876544455566655543
Q ss_pred h--cCEEEEehhhhhCCc
Q psy2386 207 Y--IDGVMLGREAYKNPF 222 (311)
Q Consensus 207 ~--adgVmigRa~l~~P~ 222 (311)
. ||+||+-...|..|.
T Consensus 124 ~~Gadavlv~~P~Y~~~s 141 (343)
T 2v9d_A 124 QAGADGIVVINPYYWKVS 141 (343)
T ss_dssp HHTCSEEEEECCSSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 2 999999999887774
No 493
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=91.82 E-value=1.3 Score=39.09 Aligned_cols=120 Identities=13% Similarity=0.172 Sum_probs=73.5
Q ss_pred HHHHH-hCCCcEEEecceeccccc-CCchhcccc---CCCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCcc
Q psy2386 10 MFHRQ-ITRYSWLYTEMFTTQAIL-GNKKHCLDF---NAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSN 84 (311)
Q Consensus 10 ~l~~~-~g~~~l~~temv~a~~l~-~~~~~~l~~---~~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~ 84 (311)
+|+|+ .+..+|+=-|.++.+..+ .+....++. -..+.-.++=.+..||. .|+.+++.|++.| .-.|.|.
T Consensus 94 ~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~----~akrl~~~G~~aV-mPlg~pI- 167 (265)
T 1wv2_A 94 RLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPI----IARQLAEIGCIAV-MPLAGLI- 167 (265)
T ss_dssp HHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHH----HHHHHHHSCCSEE-EECSSST-
T ss_pred HHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHhCCCEE-EeCCccC-
Confidence 57788 554678888988877765 432222211 11233344444667765 4677888999999 5556764
Q ss_pred ccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecC
Q psy2386 85 RVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHAR 154 (311)
Q Consensus 85 ~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~R 154 (311)
|.|..+ .|++++..|+ +..++||.+.=.++ . .+-+..+.+.|++.+.|-..
T Consensus 168 -----GsG~Gi-~~~~lI~~I~----e~~~vPVI~eGGI~--T-------PsDAa~AmeLGAdgVlVgSA 218 (265)
T 1wv2_A 168 -----GSGLGI-CNPYNLRIIL----EEAKVPVLVDAGVG--T-------ASDAAIAMELGCEAVLMNTA 218 (265)
T ss_dssp -----TCCCCC-SCHHHHHHHH----HHCSSCBEEESCCC--S-------HHHHHHHHHHTCSEEEESHH
T ss_pred -----CCCCCc-CCHHHHHHHH----hcCCCCEEEeCCCC--C-------HHHHHHHHHcCCCEEEEChH
Confidence 234333 4677765554 45689998854442 1 23456667789999988543
No 494
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.76 E-value=4.1 Score=37.57 Aligned_cols=127 Identities=15% Similarity=0.190 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEeccCCCCCcHHHHH
Q psy2386 56 EPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVR 135 (311)
Q Consensus 56 ~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR~g~~~~~~~~~~~ 135 (311)
+.+...+.|+.+.++|++.+-...--|-+.. .+|-+ + . +.-.++++.+++..++|+..-+ +|.. ..
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~--~~f~g-l--g-~egl~~l~~~~~e~Gl~~~te~---~d~~-----~~ 183 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSP--YSFQG-L--G-EKGLEYLREAADKYGMYVVTEA---LGED-----DL 183 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCST--TSCCC-C--T-HHHHHHHHHHHHHHTCEEEEEC---SSGG-----GH
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCCh--HhhcC-C--C-HHHHHHHHHHHHHcCCcEEEEe---CCHH-----HH
Confidence 6888889999999999999877766664421 11111 1 1 2334555666777899987632 2321 13
Q ss_pred HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCC-CHHHHHHHHhh-----cC
Q psy2386 136 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIK-TKKEIDLHLNY-----ID 209 (311)
Q Consensus 136 e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~-s~~da~~~l~~-----ad 209 (311)
++ +.+. ++.+.|-+|+. -++++++++.+ . +.||+..-|.. |++++....+. ..
T Consensus 184 ~~---l~~~-vd~lkIgAr~~---------------~n~~LL~~va~-~-~kPVilk~G~~~tl~ei~~Ave~i~~~GN~ 242 (350)
T 1vr6_A 184 PK---VAEY-ADIIQIGARNA---------------QNFRLLSKAGS-Y-NKPVLLKRGFMNTIEEFLLSAEYIANSGNT 242 (350)
T ss_dssp HH---HHHH-CSEEEECGGGT---------------TCHHHHHHHHT-T-CSCEEEECCTTCCHHHHHHHHHHHHHTTCC
T ss_pred HH---HHHh-CCEEEECcccc---------------cCHHHHHHHHc-c-CCcEEEcCCCCCCHHHHHHHHHHHHHCCCC
Confidence 33 4566 89999999974 37888999885 4 79999888887 88888877653 44
Q ss_pred EEEEe-hhh
Q psy2386 210 GVMLG-REA 217 (311)
Q Consensus 210 gVmig-Ra~ 217 (311)
-|++. ||.
T Consensus 243 ~viLceRG~ 251 (350)
T 1vr6_A 243 KIILCERGI 251 (350)
T ss_dssp CEEEEECCB
T ss_pred eEEEEeCCC
Confidence 45665 775
No 495
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.75 E-value=1.4 Score=38.11 Aligned_cols=124 Identities=11% Similarity=0.049 Sum_probs=74.8
Q ss_pred HHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHh---ccccceeEEEEec-cCCC---CCcHHHHHHH
Q psy2386 65 KIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMR---DSVEIDITVKHRI-GIDD---INSYDFVRDF 137 (311)
Q Consensus 65 ~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~---~~~~~pvsvKiR~-g~~~---~~~~~~~~e~ 137 (311)
..+++.|+|-|||+.+=.. | .|--....+ +.++ +.+++||.|=||+ +-+. +.+.+...+=
T Consensus 15 ~~A~~~GAdRIELc~~L~~--------G-GlTPS~g~i----~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 15 TRLDKAIISRVELCDNLAV--------G-GTTPSYGVI----KEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp GGCCTTTCCEEEEEBCGGG--------T-CBCCCHHHH----HHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCCccc--------C-CcCCCHHHH----HHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 3456789999999843111 1 121122333 4444 6678999999987 2221 1223344455
Q ss_pred HHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecC---C--CCHHHHHHHHhh--cCE
Q psy2386 138 VGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGG---I--KTKKEIDLHLNY--IDG 210 (311)
Q Consensus 138 ~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGg---I--~s~~da~~~l~~--adg 210 (311)
++.+.+.|++.|.+-.-|. . +..|.+.++++.+....+||...=- + .++..+.+.+.. ++.
T Consensus 82 i~~~~~~GadGvV~G~Lt~--d----------g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~r 149 (224)
T 2bdq_A 82 ILRAVELESDALVLGILTS--N----------NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTR 149 (224)
T ss_dssp HHHHHHTTCSEEEECCBCT--T----------SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCE
T ss_pred HHHHHHcCCCEEEEeeECC--C----------CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCE
Confidence 6778899999998855442 1 2378888888876653577776543 2 566666555543 776
Q ss_pred EEE
Q psy2386 211 VML 213 (311)
Q Consensus 211 Vmi 213 (311)
|.-
T Consensus 150 ILT 152 (224)
T 2bdq_A 150 ILL 152 (224)
T ss_dssp EEE
T ss_pred EEC
Confidence 663
No 496
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=91.69 E-value=0.52 Score=42.24 Aligned_cols=86 Identities=9% Similarity=0.006 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCCCEEEEecCc----cccccCCCCcCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cC
Q psy2386 135 RDFVGTVSSAGCRTFIVHARN----AFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-ID 209 (311)
Q Consensus 135 ~e~~~~l~~~G~~~itvh~Rt----~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-ad 209 (311)
.++++.+.++|++.|.+-... ....|.. ...+.+.++++++.+ ++|++.++++.+.++++.+++. ||
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~-------~~~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad 102 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVA-------RMSDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVD 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC-------CCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCc-------cCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCC
Confidence 578999999999999872111 0011210 123578899999887 8999999988888888888876 99
Q ss_pred EEEEehhhhhCCcchHHhHh
Q psy2386 210 GVMLGREAYKNPFLMSNFDL 229 (311)
Q Consensus 210 gVmigRa~l~~P~i~~~~~~ 229 (311)
+| .+......|.+.+.+.+
T Consensus 103 ~v-~~~~~~~~~~~~~~~~~ 121 (297)
T 2zbt_A 103 FI-DESEVLTPADEEHHIDK 121 (297)
T ss_dssp EE-EEETTSCCSCSSCCCCG
T ss_pred EE-eeeCCCChHHHHHHHHH
Confidence 99 44433333455555543
No 497
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=91.68 E-value=0.93 Score=40.76 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 136 DFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 136 e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
+-++.+.++|+|.|-++.-+ .+.++++.+.+ +++++.++||| +++.+.++.+. +|.+.+
T Consensus 209 ~ea~eAl~aGaD~I~LDn~~------------------~~~l~~av~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~Isv 269 (287)
T 3tqv_A 209 DELNQAIAAKADIVMLDNFS------------------GEDIDIAVSIARGKVALEVSGNI-DRNSIVAIAKTGVDFISV 269 (287)
T ss_dssp HHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHHTTTCEEEEESSC-CTTTHHHHHTTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEEcCCC------------------HHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHcCCCEEEE
Confidence 34555667899999886432 23444444432 36899999999 57888888876 999999
Q ss_pred ehhhhhCCc
Q psy2386 214 GREAYKNPF 222 (311)
Q Consensus 214 gRa~l~~P~ 222 (311)
|.-...-|+
T Consensus 270 Galt~sa~~ 278 (287)
T 3tqv_A 270 GAITKHIKA 278 (287)
T ss_dssp SHHHHSBCC
T ss_pred ChhhcCCcc
Confidence 865544444
No 498
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.62 E-value=7.2 Score=34.92 Aligned_cols=152 Identities=14% Similarity=0.098 Sum_probs=97.0
Q ss_pred CCCCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEeccCCCccccccCcccCcccCChHHHHHHHHHHhccccceeEEEEe
Q psy2386 43 AEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHR 122 (311)
Q Consensus 43 ~~~~p~~~Ql~g~~~~~~~~aa~~~~~~g~d~IdiN~gCP~~~v~~~~~G~~Ll~~~~~~~~iv~~v~~~~~~pvsvKiR 122 (311)
....|+++.+++++..+..+.++.+++.|+|++=+- .|..+. -+.+-+.+-.++|.+++++||.+=--
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~~----------~~~~~l~~~f~~va~a~~lPiilYn~ 138 (300)
T 3eb2_A 71 QRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAI--LEAYFP----------LKDAQIESYFRAIADAVEIPVVIYTN 138 (300)
T ss_dssp TTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEE--ECCSSC----------CCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc--CCCCCC----------CCHHHHHHHHHHHHHHCCCCEEEEEC
Confidence 456799999999999999999999999999999873 454321 24567778888888888999987653
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcC-CCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhCC-CCeEEEecCCCCHHH
Q psy2386 123 IGIDDINSYDFVRDFVGTVSSAG-CRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFP-ELEIIINGGIKTKKE 200 (311)
Q Consensus 123 ~g~~~~~~~~~~~e~~~~l~~~G-~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~~-~ipvi~nGgI~s~~d 200 (311)
.+....+- ..+++.+|.+.+ +-+|.-.. .|+..+.++.+..+ ++.|+ +|+=...
T Consensus 139 P~~tg~~l---~~~~~~~La~~pnIvgiKdss------------------gd~~~~~~~~~~~~~~f~v~-~G~d~~~-- 194 (300)
T 3eb2_A 139 PQFQRSDL---TLDVIARLAEHPRIRYIKDAS------------------TNTGRLLSIINRCGDALQVF-SASAHIP-- 194 (300)
T ss_dssp TTTCSSCC---CHHHHHHHHTSTTEEEEEECS------------------SBHHHHHHHHHHHGGGSEEE-ECTTSCH--
T ss_pred ccccCCCC---CHHHHHHHHcCCCEEEEEcCC------------------CCHHHHHHHHHHcCCCeEEE-eCcHHHH--
Confidence 33222111 135666665432 22221110 26666777766543 35444 4543322
Q ss_pred HHHHHh-hcCEEEEehhhhhCCcchHHhHhhhc
Q psy2386 201 IDLHLN-YIDGVMLGREAYKNPFLMSNFDLNYY 232 (311)
Q Consensus 201 a~~~l~-~adgVmigRa~l~~P~i~~~~~~~~~ 232 (311)
...+. +++|++.+.+.+ -|..+.++.+.+.
T Consensus 195 -~~~l~~G~~G~is~~an~-~P~~~~~l~~a~~ 225 (300)
T 3eb2_A 195 -AAVMLIGGVGWMAGPACI-APRQSVALYELCK 225 (300)
T ss_dssp -HHHHHTTCCEEEEGGGGT-CHHHHHHHHHHHH
T ss_pred -HHHHhCCCCEEEeChhhh-hHHHHHHHHHHHH
Confidence 33343 499999988764 4667777666544
No 499
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.57 E-value=1.3 Score=43.01 Aligned_cols=93 Identities=19% Similarity=0.247 Sum_probs=60.4
Q ss_pred ceeEEEEeccCCCCCcHHHHHHHHHHHHHcCCCEEEEecCccc--------cccC------------------CCC----
Q psy2386 115 IDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAF--------LKKL------------------NPK---- 164 (311)
Q Consensus 115 ~pvsvKiR~g~~~~~~~~~~~e~~~~l~~~G~~~itvh~Rt~~--------~~G~------------------~g~---- 164 (311)
.|..+.+-.+ .+ .+...+++++++++|+++|.||--... ..|+ +|-
T Consensus 247 ~~~~~QLy~~--~d--~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~ 322 (511)
T 1kbi_A 247 QIQWYQLYVN--SD--RKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRAL 322 (511)
T ss_dssp CCEEEEECCC--SS--HHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGC
T ss_pred CCeEEEEeec--CC--HHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHH
Confidence 4566654322 21 124678889999999998877632110 0111 000
Q ss_pred cCCCCCcCcHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHhh-cCEEEE
Q psy2386 165 QNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNY-IDGVML 213 (311)
Q Consensus 165 ~~~~~~~~~~~~i~~i~~~~~~ipvi~nGgI~s~~da~~~l~~-adgVmi 213 (311)
.....+...|+.|+++++.. ++||+.- ++.++++++.+.+. +|+|.+
T Consensus 323 ~~~~d~~~~~~~i~~lr~~~-~~PvivK-gv~~~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 323 SKFIDPSLTWKDIEELKKKT-KLPIVIK-GVQRTEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp BTTBCTTCCHHHHHHHHHHC-SSCEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred hhccChHhHHHHHHHHHHHh-CCcEEEE-eCCCHHHHHHHHHcCCCEEEE
Confidence 00012345799999999998 7999877 46679999988876 999999
No 500
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=91.57 E-value=0.48 Score=43.20 Aligned_cols=85 Identities=12% Similarity=0.075 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccCCCCcCCCCCcCcHHHHHHHHHhC-CCCeEEEecCCCCHHHHHHHHhh--
Q psy2386 131 YDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDF-PELEIIINGGIKTKKEIDLHLNY-- 207 (311)
Q Consensus 131 ~~~~~e~~~~l~~~G~~~itvh~Rt~~~~G~~g~~~~~~~~~~~~~i~~i~~~~-~~ipvi~nGgI~s~~da~~~l~~-- 207 (311)
++.+..+++.+.+.|++.|.+-|-|+....++-. -..+.++.+.+.+ .++|||+.=|=.|.+++.++.+.
T Consensus 42 ~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~-------Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 42 EKAFCNFVEWQITQGINGVSPVGTTGESPTLTHE-------EHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCccccCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 4567888999999999999999888633332211 1123455555443 25898876555566666665532
Q ss_pred ---cCEEEEehhhhhCCc
Q psy2386 208 ---IDGVMLGREAYKNPF 222 (311)
Q Consensus 208 ---adgVmigRa~l~~P~ 222 (311)
||+||+-...|..|.
T Consensus 115 ~~Gadavlv~~P~y~~~~ 132 (315)
T 3si9_A 115 KAGADAVLVVTPYYNRPN 132 (315)
T ss_dssp HTTCSEEEEECCCSSCCC
T ss_pred hcCCCEEEECCCCCCCCC
Confidence 999999998887774
Done!